WorldWideScience

Sample records for vegetables tomatoes metadata

  1. Metadata

    CERN Document Server

    Zeng, Marcia Lei

    2016-01-01

    Metadata remains the solution for describing the explosively growing, complex world of digital information, and continues to be of paramount importance for information professionals. Providing a solid grounding in the variety and interrelationships among different metadata types, Zeng and Qin's thorough revision of their benchmark text offers a comprehensive look at the metadata schemas that exist in the world of library and information science and beyond, as well as the contexts in which they operate. Cementing its value as both an LIS text and a handy reference for professionals already in the field, this book: * Lays out the fundamentals of metadata, including principles of metadata, structures of metadata vocabularies, and metadata descriptions * Surveys metadata standards and their applications in distinct domains and for various communities of metadata practice * Examines metadata building blocks, from modelling to defining properties, and from designing application profiles to implementing value vocabu...

  2. Metadata

    CERN Document Server

    Pomerantz, Jeffrey

    2015-01-01

    When "metadata" became breaking news, appearing in stories about surveillance by the National Security Agency, many members of the public encountered this once-obscure term from information science for the first time. Should people be reassured that the NSA was "only" collecting metadata about phone calls -- information about the caller, the recipient, the time, the duration, the location -- and not recordings of the conversations themselves? Or does phone call metadata reveal more than it seems? In this book, Jeffrey Pomerantz offers an accessible and concise introduction to metadata. In the era of ubiquitous computing, metadata has become infrastructural, like the electrical grid or the highway system. We interact with it or generate it every day. It is not, Pomerantz tell us, just "data about data." It is a means by which the complexity of an object is represented in a simpler form. For example, the title, the author, and the cover art are metadata about a book. When metadata does its job well, it fades i...

  3. Some fungal endophytes from vegetable crops and their anti-oomycete activities against tomato late blight.

    Science.gov (United States)

    Kim, H-Y; Choi, G J; Lee, H B; Lee, S-W; Lim, H K; Jang, K S; Son, S W; Lee, S O; Cho, K Y; Sung, N D; Kim, J-C

    2007-03-01

    To isolate endophytic fungi from vegetable plants and examine their in vivo anti-oomycete activity against Phytophthora infestans in tomato plants. Endophytic fungi were isolated from surface-sterilized plant tissues and anti-oomycete activity was measured by in vivo assay using tomato seedlings. Endophytic fungi showing potent anti-oomycete activity were identified by morphological characteristics and nuclear ribosomal ITS1-5.8S-ITS2 sequence analysis. A total of 152 isolates were obtained from 66 healthy tissue samples of cucumber, red pepper, tomato, pumpkin and Chinese cabbage and the fermentation broths of 23 isolates showed potent in vivo anti-oomycete activity against tomato late blight with control values over 90%. The Fusarium oxysporum strain EF119, which was isolated from roots of red pepper, showed the most potent disease control efficacy against tomato late blight. In dual-culture tests, it inhibited the growth of Pythium ultimum, P. infestans and Phytophthora capsici. Among endophytic fungi isolated from healthy tissues of vegetable plants, F. oxysporum EF119 showed the most potent in vivo anti-oomycete activity against tomato late blight and in vitro anti-oomycete activity against several oomycete pathogens. Endophytic fungi showing anti-oomycete activity in vitro and in vivo may be used as biocontrol agents particularly of tomato late blight.

  4. [Examination of processed vegetable foods for the presence of common DNA sequences of genetically modified tomatoes].

    Science.gov (United States)

    Kitagawa, Mamiko; Nakamura, Kosuke; Kondo, Kazunari; Ubukata, Shoji; Akiyama, Hiroshi

    2014-01-01

    The contamination of processed vegetable foods with genetically modified tomatoes was investigated by the use of qualitative PCR methods to detect the cauliflower mosaic virus 35S promoter (P35S) and the kanamycin resistance gene (NPTII). DNA fragments of P35S and NPTII were detected in vegetable juice samples, possibly due to contamination with the genomes of cauliflower mosaic virus infecting juice ingredients of Brassica species and soil bacteria, respectively. Therefore, to detect the transformation construct sequences of GM tomatoes, primer pairs were designed for qualitative PCR to specifically detect the border region between P35S and NPTII, and the border region between nopaline synthase gene promoter and NPTII. No amplification of the targeted sequences was observed using genomic DNA purified from the juice ingredients. The developed qualitative PCR method is considered to be a reliable tool to check contamination of products with GM tomatoes.

  5. Impact of essential oils on the taste acceptance of tomato juice, vegetable soup, or poultry burgers.

    Science.gov (United States)

    Espina, Laura; García-Gonzalo, Diego; Pagán, Rafael

    2014-08-01

    Despite the vast body of available literature on the possibilities of essential oils (EOs) as food preservatives or functional ingredients, the sensory impact of their addition to foods has barely been approached. This work focuses on the hedonic taste acceptance of 3 food products (tomato juice, vegetable soup, and poultry burgers) when they are incorporated with potentially antimicrobial concentrations (20 to 200 μL/L) of 6 selected EOs (lemon, pennyroyal mint, thyme, and rosemary) and individual compounds (carvacrol, p-cymene). Although addition of 20 μL/L of pennyroyal mint or lemon EO did not change the taste acceptance of tomato juice, higher concentrations of these compounds or any concentration of the other 4 compounds did. In vegetable soup, the tolerance limit for rosemary EO, thyme EO, carvacrol, or p-cymene was 20 μL/L, while the addition of 200 μL/L of lemon EO was accepted. Tolerance limits in poultry burgers were established in 20 μL/L for carvacrol and thyme EOs, 100 μL/L for pennyroyal mint EO and p-cymene, and 200 μL/L for lemon and rosemary EOs. Moreover, incorporation of pennyroyal mint EO to tomato juice or poultry burgers, and enrichment of vegetable soup with lemon EO, could contribute to the development of food products with an improved sensory appeal. © 2014 Institute of Food Technologists®

  6. Study protocol: a cluster randomised controlled trial of a school based fruit and vegetable intervention - Project Tomato.

    Science.gov (United States)

    Kitchen, Meaghan S; Ransley, Joan K; Greenwood, Darren C; Clarke, Graham P; Conner, Mark T; Jupp, Jennifer; Cade, Janet E

    2009-06-16

    The School Fruit and Vegetable Scheme (SFVS) is an important public health intervention. The aim of this scheme is to provide a free piece of fruit and/or vegetable every day for children in Reception to Year 2. When children are no longer eligible for the scheme (from Year 3) their overall fruit and vegetable consumption decreases back to baseline levels. This proposed study aims to design a flexible multi-component intervention for schools to support the maintenance of fruit and vegetable consumption for Year 3 children who are no longer eligible for the scheme. This study is a cluster randomised controlled trial of Year 2 classes from 54 primary schools across England. The schools will be randomly allocated into two groups to receive either an active intervention called Project Tomato, to support maintenance of fruit intake in Year 3 children, or a less active intervention (control group), consisting of a 5 A DAY booklet. Children's diets will be analysed using the Child And Diet Evaluation Tool (CADET), and height and weight measurements collected, at baseline (Year 2) and 18 month follow-up (Year 4). The primary outcome will be the ability of the intervention (Project Tomato) to maintain consumption of fruit and vegetable portions compared to the control group. A positive result will identify how fruit and vegetable consumption can be maintained in young children, and will be useful for policies supporting the SFVS. A negative result would be used to inform the research agenda and contribute to redefining future strategies for increasing children's fruit and vegetable consumption. Medical Research Council Registry code G0501297.

  7. Study protocol: a cluster randomised controlled trial of a school based fruit and vegetable intervention – Project Tomato

    Science.gov (United States)

    Kitchen, Meaghan S; Ransley, Joan K; Greenwood, Darren C; Clarke, Graham P; Conner, Mark T; Jupp, Jennifer; Cade, Janet E

    2009-01-01

    Background The School Fruit and Vegetable Scheme (SFVS) is an important public health intervention. The aim of this scheme is to provide a free piece of fruit and/or vegetable every day for children in Reception to Year 2. When children are no longer eligible for the scheme (from Year 3) their overall fruit and vegetable consumption decreases back to baseline levels. This proposed study aims to design a flexible multi-component intervention for schools to support the maintenance of fruit and vegetable consumption for Year 3 children who are no longer eligible for the scheme. Method This study is a cluster randomised controlled trial of Year 2 classes from 54 primary schools across England. The schools will be randomly allocated into two groups to receive either an active intervention called Project Tomato, to support maintenance of fruit intake in Year 3 children, or a less active intervention (control group), consisting of a 5 A DAY booklet. Children's diets will be analysed using the Child And Diet Evaluation Tool (CADET), and height and weight measurements collected, at baseline (Year 2) and 18 month follow-up (Year 4). The primary outcome will be the ability of the intervention (Project Tomato) to maintain consumption of fruit and vegetable portions compared to the control group. Discussion A positive result will identify how fruit and vegetable consumption can be maintained in young children, and will be useful for policies supporting the SFVS. A negative result would be used to inform the research agenda and contribute to redefining future strategies for increasing children's fruit and vegetable consumption. Trial registration Medical Research Council Registry code G0501297 PMID:19531246

  8. Study protocol: a cluster randomised controlled trial of a school based fruit and vegetable intervention – Project Tomato

    Directory of Open Access Journals (Sweden)

    Conner Mark T

    2009-06-01

    Full Text Available Abstract Background The School Fruit and Vegetable Scheme (SFVS is an important public health intervention. The aim of this scheme is to provide a free piece of fruit and/or vegetable every day for children in Reception to Year 2. When children are no longer eligible for the scheme (from Year 3 their overall fruit and vegetable consumption decreases back to baseline levels. This proposed study aims to design a flexible multi-component intervention for schools to support the maintenance of fruit and vegetable consumption for Year 3 children who are no longer eligible for the scheme. Method This study is a cluster randomised controlled trial of Year 2 classes from 54 primary schools across England. The schools will be randomly allocated into two groups to receive either an active intervention called Project Tomato, to support maintenance of fruit intake in Year 3 children, or a less active intervention (control group, consisting of a 5 A DAY booklet. Children's diets will be analysed using the Child And Diet Evaluation Tool (CADET, and height and weight measurements collected, at baseline (Year 2 and 18 month follow-up (Year 4. The primary outcome will be the ability of the intervention (Project Tomato to maintain consumption of fruit and vegetable portions compared to the control group. Discussion A positive result will identify how fruit and vegetable consumption can be maintained in young children, and will be useful for policies supporting the SFVS. A negative result would be used to inform the research agenda and contribute to redefining future strategies for increasing children's fruit and vegetable consumption. Trial registration Medical Research Council Registry code G0501297

  9. Methods to isolate a large amount of generative cells, sperm cells and vegetative nuclei from tomato pollen for omics analysis

    Directory of Open Access Journals (Sweden)

    Yunlong eLu

    2015-06-01

    Full Text Available The development of sperm cells from microspores involves a set of finely regulated molecular and cellular events and the coordination of these events. The mechanisms underlying these events and their interconnections remain a major challenge. Systems analysis of genome-wide molecular networks and functional modules with high-throughput omics approaches is crucial for understanding the mechanisms; however, this study is hindered because of the difficulty in isolating a large amount of cells of different types, especially generative cells (GCs, from the pollen. Here, we optimized the conditions of tomato pollen germination and pollen tube growth to allow for long-term growth of pollen tubes in vitro with sperm cells (SCs generated in the tube. Using this culture system, we developed methods for isolating GCs, SCs and vegetative-cell nuclei (VN from just-germinated tomato pollen grains and growing pollen tubes and their purification by Percoll density gradient centrifugation. The purity and viability of isolated GCs and SCs were confirmed by microscopy examination and fluorescein diacetate staining, respectively, and the integrity of VN was confirmed by propidium iodide staining. We could obtain about 1.5 million GCs and 2.0 million SCs each from 180 mg initiated pollen grains, and 10 million VN from 270 mg initiated pollen grains germinated in vitro in each experiment. These methods provide the necessary preconditions for systematic biology studies of SC development and differentiation in higher plants.

  10. Methods to isolate a large amount of generative cells, sperm cells and vegetative nuclei from tomato pollen for "omics" analysis.

    Science.gov (United States)

    Lu, Yunlong; Wei, Liqin; Wang, Tai

    2015-01-01

    The development of sperm cells (SCs) from microspores involves a set of finely regulated molecular and cellular events and the coordination of these events. The mechanisms underlying these events and their interconnections remain a major challenge. Systems analysis of genome-wide molecular networks and functional modules with high-throughput "omics" approaches is crucial for understanding the mechanisms; however, this study is hindered because of the difficulty in isolating a large amount of cells of different types, especially generative cells (GCs), from the pollen. Here, we optimized the conditions of tomato pollen germination and pollen tube growth to allow for long-term growth of pollen tubes in vitro with SCs generated in the tube. Using this culture system, we developed methods for isolating GCs, SCs and vegetative cell nuclei (VN) from just-germinated tomato pollen grains and growing pollen tubes and their purification by Percoll density gradient centrifugation. The purity and viability of isolated GCs and SCs were confirmed by microscopy examination and fluorescein diacetate staining, respectively, and the integrity of VN was confirmed by propidium iodide staining. We could obtain about 1.5 million GCs and 2.0 million SCs each from 180 mg initiated pollen grains, and 10 million VN from 270 mg initiated pollen grains germinated in vitro in each experiment. These methods provide the necessary preconditions for systematic biology studies of SC development and differentiation in higher plants.

  11. Tomato Leaf Curl New Delhi Virus: An Emerging Virus Complex Threatening Vegetable and Fiber Crops

    Directory of Open Access Journals (Sweden)

    Enrique Moriones

    2017-09-01

    Full Text Available The tomato leaf curl New Delhi virus (ToLCNDV (genus Begomovirus, family Geminiviridae represents an important constraint to tomato production, as it causes the most predominant and economically important disease affecting tomato in the Indian sub-continent. However, in recent years, ToLCNDV has been fast extending its host range and spreading to new geographical regions, including the Middle East and the western Mediterranean Basin. Extensive research on the genome structure, protein functions, molecular biology, and plant–virus interactions of ToLCNDV has been conducted in the last decade. Special emphasis has been given to gene silencing suppression ability in order to counteract host plant defense responses. The importance of the interaction with DNA alphasatellites and betasatellites in the biology of the virus has been demonstrated. ToLCNDV genetic variability has been analyzed, providing new insights into the taxonomy, host adaptation, and evolution of this virus. Recombination and pseudorecombination have been shown as motors of diversification and adaptive evolution. Important progress has also been made in control strategies to reduce disease damage. This review highlights these various achievements in the context of the previous knowledge of begomoviruses and their interactions with plants.

  12. Radiation preservation of foods of plant origin. Part VI. Mushrooms, tomatoes, minor fruits and vegetables, dried fruits, and nuts

    International Nuclear Information System (INIS)

    Thomas, P.

    1988-01-01

    In this concluding article in the series on the technological feasibility of ionizing radiation treatment for shelf life improvement of fruits and vegetables, the present status of research on several commodities that have not been dealt with earlier is discussed. The commodities include mushrooms, tomatoes, pineapples, lychees, longans, rambutans, mangostenes, guavas, sapotas, loquats, ber, soursops, passion fruits, persimmons, figs, melons, cucumbers, aubergines, globe artichokes, endives, lettuce, ginger, carrots, beet roots, turnips, olives, dates, chestnuts, almonds, pistachios, and other dried fruits and nuts. Changes induced by irradiation on metabolism, chemical constituents, and organoleptic qualities are considered while evaluating the shelf life. The commodities have been grouped into those showing potential benefits and those not showing any clear advantages from radiation treatment. Shelf life improvement of mushrooms and insect disinfestation in dried fruits, nuts, and certain fresh fruits appears to have immediate potential for commercial application. 194 references

  13. Semi-determinate growth habit adjusts the vegetative-to-reproductive balance and increases productivity and water-use efficiency in tomato (Solanum lycopersicum).

    Science.gov (United States)

    Vicente, Mateus Henrique; Zsögön, Agustin; de Sá, Ariadne Felicio Lopo; Ribeiro, Rafael V; Peres, Lázaro E P

    2015-04-01

    Tomato (Solanum lycopersicum) shows three growth habits: determinate, indeterminate and semi-determinate. These are controlled mainly by allelic variation in the self-pruning (SP) gene family, which also includes the "florigen" gene single flower TRUSS (SFT). Determinate cultivars have synchronized flower and fruit production, which allows mechanical harvesting in the tomato processing industry, whereas indeterminate ones have more vegetative growth with continuous flower and fruit formation, being thus preferred for fresh market tomato production. The semi-determinate growth habit is poorly understood, although there are indications that it combines advantages of determinate and indeterminate growth. Here, we used near-isogenic lines (NILs) in the cultivar Micro-Tom (MT) with different growth habit to characterize semi-determinate growth and to determine its impact on developmental and productivity traits. We show that semi-determinate genotypes are equivalent to determinate ones with extended vegetative growth, which in turn impacts shoot height, number of leaves and either stem diameter or internode length. Semi-determinate plants also tend to increase the highly relevant agronomic parameter Brix × ripe yield (BRY). Water-use efficiency (WUE), evaluated either directly as dry mass produced per amount of water transpired or indirectly through C isotope discrimination, was higher in semi-determinate genotypes. We also provide evidence that the increases in BRY in semi-determinate genotypes are a consequence of an improved balance between vegetative and reproductive growth, a mechanism analogous to the conversion of the overly vegetative tall cereal varieties into well-balanced semi-dwarf ones used in the Green Revolution. Copyright © 2015 Elsevier GmbH. All rights reserved.

  14. Comparison of some Vegetative and Reproductive Traits of Dominant Weeds in Cultivated Tomato as Influence by Metribuzin and Non-living Mulches

    Directory of Open Access Journals (Sweden)

    R. Zangoueinejad

    2016-03-01

    Full Text Available Introduction: Tomato production, similar to other important crops, is affected by weed competition in the early season. Weed infestation can affect tomato yield significantly. So weed control can be one of the most important factors in improving of crop production. Nowadays pre-plant, post-plant and post-emergence herbicides are widely used for controlling weeds in tomato fields, but it can lead to increasing environmental hazards, making weed resistant to herbicides and injuring tomato plants. Therefore, the use of non-living mulch (organic mulch and inorganic mulch could be a suitable substitutional way to weed control. Material and method: In this study, in order to investigating the time of emergence, flowering, seed shattering, length of vegetative and reproductive growth period of weeds under six types of non-living mulches (black plastic mulch, clear plastic mulch, wheat straw, sawdust, coco peat and peat moss and mtribuzin in tomato, research was conducted in a randomized complete block design with three replications at College of Agriculture, Shiraz University in 2012. The plots were fertilized with 20:20:20 (N, P2O5 and K2O with concentration of 166 kg ha-1. In this study, the appearance of plumule (for narrow leaf weeds and hypocotyl (for broad leaf weeds from weed seeds in soil medium was considered as the time of emergence. The weeds were visited once a week since transplanting tomato seedlings to the farm and the related date was recorded. Flowering time recording for each weed species was carried out after flowering. Plots without mulch (weedy and weed free were used as control. Statistical analysis of the collected data was performed by using SAS 9.1 software and comparing of the mean of characteristics was done by Tukey's test at 5 % significant level. Result and discussion: The longest and shortest time of weed emergence respectively belonged to the clear plastic mulch (28 days after transplanting and organic mulches and

  15. Isatin as an auxin source favoring floral and vegetative shoot regeneration from calli produced by thin layer explants of tomato pedicel

    Science.gov (United States)

    Applewhite, P. B.; K-Sawhney, R.; Galston, A. W.

    1994-01-01

    Thin layer explants taken from the pedicels and peduncles of flowering tomato plants yielded calli with great organogenetic potential. Of the 15 cultivars tested, 7 regenerated roots, shoots and eventually entire fruit-bearing plants. Calli grown on modified Murashige-Skoog medium responded to varied auxins and cytokinins with different morphogenetic patterns. Thus, naphthaleneacetic acid yielded root-producing calli, while the auxin precursor isatin (indole 2,3-dione) caused the production of calli with vegetative and floral shoots, rarely yielding roots. This may be related to isatin's slow, steady conversion to an active auxin (Plant Physiol 41:1485-1488, 1966) in contrast with naphthaleneacetic acid's immediate presentation of a high level of active auxin. The highest incidence of vegetative shoot (100%) and flower (50%) formation was obtained with 10 micromoles isatin and 3 micromoles zeatin. A few of the flowers developed into ripe fruits. The high frequency of induction of vegetative shoots and flowers before roots with isatin suggests its utility in micropropagation from plant tissue cultures.

  16. Active Marine Station Metadata

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Active Marine Station Metadata is a daily metadata report for active marine bouy and C-MAN (Coastal Marine Automated Network) platforms from the National Data...

  17. Tethys Acoustic Metadata Database

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Tethys database houses the metadata associated with the acoustic data collection efforts by the Passive Acoustic Group. These metadata include dates, locations...

  18. Fruits and vegetables (image)

    Science.gov (United States)

    A healthy diet includes adding vegetables and fruit every day. Vegetables like broccoli, green beans, leafy greens, zucchini, cauliflower, cabbage, carrots, and tomatoes are low in calories and high in fiber, vitamins, and minerals. ...

  19. USGIN ISO metadata profile

    Science.gov (United States)

    Richard, S. M.

    2011-12-01

    The USGIN project has drafted and is using a specification for use of ISO 19115/19/39 metadata, recommendations for simple metadata content, and a proposal for a URI scheme to identify resources using resolvable http URI's(see http://lab.usgin.org/usgin-profiles). The principal target use case is a catalog in which resources can be registered and described by data providers for discovery by users. We are currently using the ESRI Geoportal (Open Source), with configuration files for the USGIN profile. The metadata offered by the catalog must provide sufficient content to guide search engines to locate requested resources, to describe the resource content, provenance, and quality so users can determine if the resource will serve for intended usage, and finally to enable human users and sofware clients to obtain or access the resource. In order to achieve an operational federated catalog system, provisions in the ISO specification must be restricted and usage clarified to reduce the heterogeneity of 'standard' metadata and service implementations such that a single client can search against different catalogs, and the metadata returned by catalogs can be parsed reliably to locate required information. Usage of the complex ISO 19139 XML schema allows for a great deal of structured metadata content, but the heterogenity in approaches to content encoding has hampered development of sophisticated client software that can take advantage of the rich metadata; the lack of such clients in turn reduces motivation for metadata producers to produce content-rich metadata. If the only significant use of the detailed, structured metadata is to format into text for people to read, then the detailed information could be put in free text elements and be just as useful. In order for complex metadata encoding and content to be useful, there must be clear and unambiguous conventions on the encoding that are utilized by the community that wishes to take advantage of advanced metadata

  20. Biochemical evaluation of tomato germplasm part I: workflow and methods

    Science.gov (United States)

    Of the seed crop species conserved at PGRU, tomato (Solanum lycopersicum L.) is the largest in terms of numbers of accessions. Furthermore, tomato ranks very high among vegetable crops in economic importance to the US. We are characterizing a tomato core collection for traits that are of interest to...

  1. Harvesting NASA's Common Metadata Repository

    Science.gov (United States)

    Shum, D.; Mitchell, A. E.; Durbin, C.; Norton, J.

    2017-12-01

    As part of NASA's Earth Observing System Data and Information System (EOSDIS), the Common Metadata Repository (CMR) stores metadata for over 30,000 datasets from both NASA and international providers along with over 300M granules. This metadata enables sub-second discovery and facilitates data access. While the CMR offers a robust temporal, spatial and keyword search functionality to the general public and international community, it is sometimes more desirable for international partners to harvest the CMR metadata and merge the CMR metadata into a partner's existing metadata repository. This poster will focus on best practices to follow when harvesting CMR metadata to ensure that any changes made to the CMR can also be updated in a partner's own repository. Additionally, since each partner has distinct metadata formats they are able to consume, the best practices will also include guidance on retrieving the metadata in the desired metadata format using CMR's Unified Metadata Model translation software.

  2. Tomato Preserves.

    Science.gov (United States)

    Stevens, Wendy Tessman

    1996-01-01

    Describes a project in which students selected seeds from two heirloom varieties of tomatoes, sowed the seeds, harvested the tomatoes, and fermented the seeds. Details are provided for each step of the project and the school address is included so that other students can begin similar projects. (DDR)

  3. Application of visible/near infrared spectroscopy to quality control of fresh fruits and vegetables in large-scale mass distribution channels: a preliminary test on carrots and tomatoes.

    Science.gov (United States)

    Beghi, Roberto; Giovenzana, Valentina; Tugnolo, Alessio; Guidetti, Riccardo

    2018-05-01

    The market for fruits and vegetables is mainly controlled by the mass distribution channel (MDC). MDC buyers do not have useful instruments to rapidly evaluate the quality of the products. Decisions by the buyers are driven primarily by pricing strategies rather than product quality. Simple, rapid and easy-to-use methods for objectively evaluating the quality of postharvest products are needed. The present study aimed to use visible and near-infrared (vis/NIR) spectroscopy to estimate some qualitative parameters of two low-price products (carrots and tomatoes) of various brands, as well as evaluate the applicability of this technique for use in stores. A non-destructive optical system (vis/NIR spectrophotometer with a reflection probe, spectral range 450-1650 nm) was tested. The differences in quality among carrots and tomatoes purchased from 13 stores on various dates were examined. The reference quality parameters (firmness, water content, soluble solids content, pH and colour) were correlated with the spectral readings. The models derived from the optical data gave positive results, in particular for the prediction of the soluble solids content and the colour, with better results for tomatoes than for carrots. The application of optical techniques may help MDC buyers to monitor the quality of postharvest products, leading to an effective optimization of the entire supply chain. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  4. NAIP National Metadata

    Data.gov (United States)

    Farm Service Agency, Department of Agriculture — The NAIP National Metadata Map contains USGS Quarter Quad and NAIP Seamline boundaries for every year NAIP imagery has been collected. Clicking on the map also makes...

  5. ATLAS Metadata Task Force

    Energy Technology Data Exchange (ETDEWEB)

    ATLAS Collaboration; Costanzo, D.; Cranshaw, J.; Gadomski, S.; Jezequel, S.; Klimentov, A.; Lehmann Miotto, G.; Malon, D.; Mornacchi, G.; Nemethy, P.; Pauly, T.; von der Schmitt, H.; Barberis, D.; Gianotti, F.; Hinchliffe, I.; Mapelli, L.; Quarrie, D.; Stapnes, S.

    2007-04-04

    This document provides an overview of the metadata, which are needed to characterizeATLAS event data at different levels (a complete run, data streams within a run, luminosity blocks within a run, individual events).

  6. Data, Metadata, and Ted

    OpenAIRE

    Borgman, Christine L.

    2014-01-01

    Ted Nelson coined the term “hypertext” and developed Xanadu in a universe parallel to the one in which librarians, archivists, and documentalists were creating metadata to establish cross-connections among the myriad topics of this world. When these universes collided, comets exploded as ontologies proliferated. Black holes were formed as data disappeared through lack of description. Today these universes coexist, each informing the other, if not always happily: the formal rules of metadata, ...

  7. The RBV metadata catalog

    Science.gov (United States)

    Andre, Francois; Fleury, Laurence; Gaillardet, Jerome; Nord, Guillaume

    2015-04-01

    RBV (Réseau des Bassins Versants) is a French initiative to consolidate the national efforts made by more than 15 elementary observatories funded by various research institutions (CNRS, INRA, IRD, IRSTEA, Universities) that study river and drainage basins. The RBV Metadata Catalogue aims at giving an unified vision of the work produced by every observatory to both the members of the RBV network and any external person interested by this domain of research. Another goal is to share this information with other existing metadata portals. Metadata management is heterogeneous among observatories ranging from absence to mature harvestable catalogues. Here, we would like to explain the strategy used to design a state of the art catalogue facing this situation. Main features are as follows : - Multiple input methods: Metadata records in the catalog can either be entered with the graphical user interface, harvested from an existing catalogue or imported from information system through simplified web services. - Hierarchical levels: Metadata records may describe either an observatory, one of its experimental site or a single dataset produced by one instrument. - Multilingualism: Metadata can be easily entered in several configurable languages. - Compliance to standards : the backoffice part of the catalogue is based on a CSW metadata server (Geosource) which ensures ISO19115 compatibility and the ability of being harvested (globally or partially). On going tasks focus on the use of SKOS thesaurus and SensorML description of the sensors. - Ergonomy : The user interface is built with the GWT Framework to offer a rich client application with a fully ajaxified navigation. - Source code sharing : The work has led to the development of reusable components which can be used to quickly create new metadata forms in other GWT applications You can visit the catalogue (http://portailrbv.sedoo.fr/) or contact us by email rbv@sedoo.fr.

  8. Vegetation

    DEFF Research Database (Denmark)

    Epstein, H.E.; Walker, D.A.; Bhatt, U.S.

    2012-01-01

    increased 20-26%. • Increasing shrub growth and range extension throughout the Low Arctic are related to winter and early growing season temperature increases. Growth of other tundra plant types, including graminoids and forbs, is increasing, while growth of mosses and lichens is decreasing. • Increases...... in vegetation (including shrub tundra expansion) and thunderstorm activity, each a result of Arctic warming, have created conditions that favor a more active Arctic fire regime....

  9. A programmatic view of metadata, metadata services, and metadata flow in ATLAS

    International Nuclear Information System (INIS)

    Malon, D; Albrand, S; Gallas, E; Stewart, G

    2012-01-01

    The volume and diversity of metadata in an experiment of the size and scope of ATLAS are considerable. Even the definition of metadata may seem context-dependent: data that are primary for one purpose may be metadata for another. ATLAS metadata services must integrate and federate information from inhomogeneous sources and repositories, map metadata about logical or physics constructs to deployment and production constructs, provide a means to associate metadata at one level of granularity with processing or decision-making at another, offer a coherent and integrated view to physicists, and support both human use and programmatic access. In this paper we consider ATLAS metadata, metadata services, and metadata flow principally from the illustrative perspective of how disparate metadata are made available to executing jobs and, conversely, how metadata generated by such jobs are returned. We describe how metadata are read, how metadata are cached, and how metadata generated by jobs and the tasks of which they are a part are communicated, associated with data products, and preserved. We also discuss the principles that guide decision-making about metadata storage, replication, and access.

  10. TOMATO LEAFMINER Scrabipalpuloides absoluta (MEYRICK CONTROL WITH A NEW PLANT DERIVED ECDISE INHIBITOR ENSAIO DE CONTROLE À TRAÇA DO TOMATEIRO Scrobipalpuloides absoluta (Meyrick COM NOVO INIBIDOR DE ECDISE DE ORIGEM VEGETAL

    Directory of Open Access Journals (Sweden)

    Antônio Lopes da Silva

    2007-09-01

    Full Text Available

    A tomato leafminer Scrobipalpuloides absoluta control trial with a new insect growth regulator was carried out in Goiânia, Goiás State, Brazil. The azaradictin (Azatin 3% at 36, 42, and 48 g a.i./ha was compared to abamectin at 14.4 g a.i./ha, Cartap at 480 g a.i./ha, and a witness with no insecticide control. Data showed that Azatin 3% at the levels tested did not efficiently control the tomato S. absoluta.

    KEY-WORDS: Scrobipalpuloides absoluta; tomato leafminer; control.

    Foi realizado, em Goiânia - GO, 1994, um ensaio de campo visando ao controle da traça do tomateiro Scrobipalpuloides absoluta (Meyrick, utilizando um novo inibidor de ecdise de origem vegetal. O azaradictin (Azatin 3% nas dosagens de 36, 42 e 48g de ingrediente ativo/ha, foi comparado com abamectin na dosagem de 14,4g de ingrediente ativo/ha, Cartap na dosagem de 480 g de ingrediente ativo/ha e uma testemunha sem inseticida. Pelos resultados obtidos concluiu-se que o Azatin 3%, nas dosagens utilizadas, não controlou eficientemente a praga S. absoluta sobre tomateiro.

    PALAVRAS-CHAVE: Traça do tomateiro; Scrobipalpuloides absoluta; controle.

  11. A Programmatic View of Metadata, Metadata Services, and Metadata Flow in ATLAS

    CERN Multimedia

    CERN. Geneva

    2012-01-01

    The volume and diversity of metadata in an experiment of the size and scope of ATLAS is considerable. Even the definition of metadata may seem context-dependent: data that are primary for one purpose may be metadata for another. Trigger information and data from the Large Hadron Collider itself provide cases in point, but examples abound. Metadata about logical or physics constructs, such as data-taking periods and runs and luminosity blocks and events and algorithms, often need to be mapped to deployment and production constructs, such as datasets and jobs and files and software versions, and vice versa. Metadata at one level of granularity may have implications at another. ATLAS metadata services must integrate and federate information from inhomogeneous sources and repositories, map metadata about logical or physics constructs to deployment and production constructs, provide a means to associate metadata at one level of granularity with processing or decision-making at another, offer a coherent and ...

  12. Metadata in Scientific Dialects

    Science.gov (United States)

    Habermann, T.

    2011-12-01

    Discussions of standards in the scientific community have been compared to religious wars for many years. The only things scientists agree on in these battles are either "standards are not useful" or "everyone can benefit from using my standard". Instead of achieving the goal of facilitating interoperable communities, in many cases the standards have served to build yet another barrier between communities. Some important progress towards diminishing these obstacles has been made in the data layer with the merger of the NetCDF and HDF scientific data formats. The universal adoption of XML as the standard for representing metadata and the recent adoption of ISO metadata standards by many groups around the world suggests that similar convergence is underway in the metadata layer. At the same time, scientists and tools will likely need support for native tongues for some time. I will describe an approach that combines re-usable metadata "components" and restful web services that provide those components in many dialects. This approach uses advanced XML concepts of referencing and linking to construct complete records that include reusable components and builds on the ISO Standards as the "unabridged dictionary" that encompasses the content of many other dialects.

  13. Languages for Metadata

    NARCIS (Netherlands)

    Brussee, R.; Veenstra, M.; Blanken, Henk; de Vries, A.P.; Blok, H.E.; Feng, L.

    2007-01-01

    The term meta origins from the Greek word µ∈τα, meaning after. The word Metaphysics is the title of Aristotle’s book coming after his book on nature called Physics. This has given meta the modern connotation of a nature of a higher order or of a more fundamental kind [1]. Literally, metadata is

  14. Antioxidant Activity from Various Tomato Processing

    Directory of Open Access Journals (Sweden)

    Retno Sri Iswari

    2016-04-01

    Full Text Available Tomato is one of the high antioxidant potential vegetables. Nowadays, there are many techniques of tomato processings instead of fresh consumption, i.e. boiled, steamed, juiced and sauteed. Every treatment of cooking will influence the chemical compound inside the fruits and the body's nutrition intake. It is important to conduct the research on antioxidant compound especially lycopene, β-carotene, vitamin C, α-tocopherol, and its activity after processing. This research has been done using the experimental method. Tomatoes were cooked into six difference ways, and then it was extracted using the same procedure continued with antioxidant measurement. The research results showed that steaming had promoted the higher antioxidant numbers (lycopene. α-tocopherol, β-carotene and vitamin C and higher TCA and antioxidant activities in the tomatoes than other processings. It was indicated that steaming was the best way to enhance amount, capacity and activities of antioxidants of the tomatoes.

  15. Hinokitiol Enhanced Vegetative Growth Parameters of Tomato cv. �Falkato� Compared with Salicylic Acid and Paclobutrazol under In Vitro Salinity Condition

    Directory of Open Access Journals (Sweden)

    Behrooz ESMAEILPOUR

    2012-02-01

    Full Text Available The aim of this study was to assess the potential in vitro effect of hinokitiol on improvement of tomato seedling resistance to salinity stress. Effect of hinokitiol was compared with two anti-stress compounds, salicylic acid and paclobutrazol. Leaf numbers, shoot and root fresh weight and root fresh weight were recorded after about 8 weeks. Salt stress was accomplished by application of two levels of pure NaCl (50 and 100 mM on MS basal medium. The treatments consisted of different concentrations of hinokitiol (0, 1, 5 and 10 ppm, paclobutrazol (0, 1, 2 and 4 ?M and salicylic acid (0, 0.01, 0.1 and 1 mM. Results revealed that salinity blocked seed germination in media containing only 100 mM of pure NaCl without any treatment. In general all three compounds increased tomato seedling growth, indicating these compounds are able to alleviate the negative effect of salinity on tomato plants. However, Hinokitiol was the most efficient compound. Compared with SA, application of hinokitiol significantly increased leaf numbers, shoot length and shoot and root dry weight. Also, media containing different concentrations of hinokitiol produced higher root and shoot fresh weight than control and other treatments. Future physiological studies are needed to clarify the mechanism of induction of salt tolerance activity by hinokitiol.

  16. Characterization and evaluation of some lines from cherry tomatoes lycopersicon esculentum mill. Var. Cerasiforme (dunal) and their ability for micropropagation in in vitro conditions

    OpenAIRE

    Dedejski, George

    2012-01-01

    Tomato production in the Republic of Macedonia is present on more than 5700 hectares, being the leading vegetable crop in the region of Strumica. Cherry tomato however, is poorly present at our fields, mainly due to the traditional habits of the consumers and the commercial tomato producers to grow tomato varieties with large fruit. Cherry tomato - Lycopersicon esculentum Mill. var. cerasiforme (Dunal) is a tomato variety with small fruit, with different shapes and colors and it is used ma...

  17. Automated Metadata Extraction

    Science.gov (United States)

    2008-06-01

    Store [4]. The files purchased from the iTunes Music Store include the following metadata. • Name • Email address of purchaser • Year • Album ...6 3. Music : MP3 and AAC .........................................................................7 4. Tagged Image File Format...Expert Group (MPEG) set of standards for music encoding. Open Document Format (ODF) – an open, license-free, and clearly documented file format

  18. Culture of the Tomato Micro-Tom Cultivar in Greenhouse.

    Science.gov (United States)

    Rothan, Christophe; Just, Daniel; Fernandez, Lucie; Atienza, Isabelle; Ballias, Patricia; Lemaire-Chamley, Martine

    2016-01-01

    Micro-Tom tomato cultivar is particularly adapted to the development of genomic approaches in tomato. Here, we describe the culture of this plant in greenhouse, including climate regulation, seed sowing and watering, vegetative development, plant maintenance, including treatment of phytosanitary problems, and reproductive development.

  19. In Vitro screening of tomato genotypes for drought resistance using ...

    African Journals Online (AJOL)

    Drought is a major abiotic factor that limits plant growth and productivity. Tomato is an important vegetable crop and area under production is limited by irrigation water scarcity. Effort was made to screen tomato germplasm under in vitro condition using polyethylene glycol (PEG) at four concentrations (0, 20, 40 and 60 g/l) ...

  20. Cytometry metadata in XML

    Science.gov (United States)

    Leif, Robert C.; Leif, Stephanie H.

    2016-04-01

    Introduction: The International Society for Advancement of Cytometry (ISAC) has created a standard for the Minimum Information about a Flow Cytometry Experiment (MIFlowCyt 1.0). CytometryML will serve as a common metadata standard for flow and image cytometry (digital microscopy). Methods: The MIFlowCyt data-types were created, as is the rest of CytometryML, in the XML Schema Definition Language (XSD1.1). The datatypes are primarily based on the Flow Cytometry and the Digital Imaging and Communication (DICOM) standards. A small section of the code was formatted with standard HTML formatting elements (p, h1, h2, etc.). Results:1) The part of MIFlowCyt that describes the Experimental Overview including the specimen and substantial parts of several other major elements has been implemented as CytometryML XML schemas (www.cytometryml.org). 2) The feasibility of using MIFlowCyt to provide the combination of an overview, table of contents, and/or an index of a scientific paper or a report has been demonstrated. Previously, a sample electronic publication, EPUB, was created that could contain both MIFlowCyt metadata as well as the binary data. Conclusions: The use of CytometryML technology together with XHTML5 and CSS permits the metadata to be directly formatted and together with the binary data to be stored in an EPUB container. This will facilitate: formatting, data- mining, presentation, data verification, and inclusion in structured research, clinical, and regulatory documents, as well as demonstrate a publication's adherence to the MIFlowCyt standard, promote interoperability and should also result in the textual and numeric data being published using web technology without any change in composition.

  1. Metadata Realities for Cyberinfrastructure: Data Authors as Metadata Creators

    Science.gov (United States)

    Mayernik, Matthew Stephen

    2011-01-01

    As digital data creation technologies become more prevalent, data and metadata management are necessary to make data available, usable, sharable, and storable. Researchers in many scientific settings, however, have little experience or expertise in data and metadata management. In this dissertation, I explore the everyday data and metadata…

  2. Evaluation of a Biostimulant (Pepton Based in Enzymatic Hydrolyzed Animal Protein in Comparison to Seaweed Extracts on Root Development, Vegetative Growth, Flowering, and Yield of Gold Cherry Tomatoes Grown under Low Stress Ambient Field Conditions

    Directory of Open Access Journals (Sweden)

    Javier Polo

    2018-01-01

    Full Text Available The objectives of this experiment were to determine the effects of different application rates of an enzyme hydrolyzed animal protein biostimulant (Pepton compared to a standard application rate of a biostimulant derived from seaweed extract (Acadian on plant growth parameters and yield of gold cherry tomatoes (Solanum lycopersicum L.. Biostimulant treatments were applied starting at 15 days after transplant and every 2 weeks thereafter for a total of 5 applications. One treatment group received no biostimulant (Control. Three treatment groups (Pepton-2, Pepton-3, Pepton-4 received Pepton at different application rates equivalent to 2, 3, or 4 kg/ha applied by foliar (first 2 applications and by irrigation (last 3 applications. Another treatment group (Acadian received Acadian at 1.5 L/ha by irrigation for all five applications. All groups received the regular fertilizer application for this crop at transplantation, flowering, and fruiting periods. There were four plots per treatment group. Each plot had a surface area of 21 m2 that consisted of two rows that were 7 m long and 1.5 m wide. Plant height, stem diameter, distance from head to bouquet flowering, fruit set distance between the entire cluster and cluster flowering fruit set, leaf length, and number of leaves per plant was recorded for 20 plants (5 plants per plot at 56 and 61 days after the first application. Root length and diameter of cherry tomatoes were determined at harvest from 20 randomly selected plants. Harvesting yield per plot was registered and production per hectare was calculated. Both biostimulants improved (P < 0.05 all vegetative parameters compared with the control group. There was a positive linear (P < 0.001 effect of Pepton application rate for all parameters. The calculated yield was 7.8 and 1 Ton/ha greater that represent 27 and 2.9% higher production for Pepton applied at 4 kg/ha compared to the control and to Acadian, respectively. In conclusion, Pepton was

  3. Philadelphia and the Tomato.

    Science.gov (United States)

    Smith, Andrew F.; Kling, Tatiana

    This booklet describes for elementary students the many contributions of people, traveling many places, over many years to bring the tomato to Philadelphia. The booklet includes the following: (1) "Introduction to the Tomato"; (2) "Where Does the Tomato Come From?"; (3) "The Spanish Tomato"; (4) "The Philadelphia…

  4. The potential of endomycorrhizal fungi in controlling tomato bacterial ...

    African Journals Online (AJOL)

    user

    2012-08-21

    Aug 21, 2012 ... The impact of colonization by three mycorrhizal fungi on tomato bacterial wilt caused by Ralstonia ... Three species of arbuscular mycorrhizal fungal (AMF) were tested. (Glomus ...... management of fruits and vegetables. Vol.

  5. Creating preservation metadata from XML-metadata profiles

    Science.gov (United States)

    Ulbricht, Damian; Bertelmann, Roland; Gebauer, Petra; Hasler, Tim; Klump, Jens; Kirchner, Ingo; Peters-Kottig, Wolfgang; Mettig, Nora; Rusch, Beate

    2014-05-01

    Registration of dataset DOIs at DataCite makes research data citable and comes with the obligation to keep data accessible in the future. In addition, many universities and research institutions measure data that is unique and not repeatable like the data produced by an observational network and they want to keep these data for future generations. In consequence, such data should be ingested in preservation systems, that automatically care for file format changes. Open source preservation software that is developed along the definitions of the ISO OAIS reference model is available but during ingest of data and metadata there are still problems to be solved. File format validation is difficult, because format validators are not only remarkably slow - due to variety in file formats different validators return conflicting identification profiles for identical data. These conflicts are hard to resolve. Preservation systems have a deficit in the support of custom metadata. Furthermore, data producers are sometimes not aware that quality metadata is a key issue for the re-use of data. In the project EWIG an university institute and a research institute work together with Zuse-Institute Berlin, that is acting as an infrastructure facility, to generate exemplary workflows for research data into OAIS compliant archives with emphasis on the geosciences. The Institute for Meteorology provides timeseries data from an urban monitoring network whereas GFZ Potsdam delivers file based data from research projects. To identify problems in existing preservation workflows the technical work is complemented by interviews with data practitioners. Policies for handling data and metadata are developed. Furthermore, university teaching material is created to raise the future scientists awareness of research data management. As a testbed for ingest workflows the digital preservation system Archivematica [1] is used. During the ingest process metadata is generated that is compliant to the

  6. Mercury Toolset for Spatiotemporal Metadata

    Science.gov (United States)

    Devarakonda, Ranjeet; Palanisamy, Giri; Green, James; Wilson, Bruce; Rhyne, B. Timothy; Lindsley, Chris

    2010-06-01

    Mercury (http://mercury.ornl.gov) is a set of tools for federated harvesting, searching, and retrieving metadata, particularly spatiotemporal metadata. Version 3.0 of the Mercury toolset provides orders of magnitude improvements in search speed, support for additional metadata formats, integration with Google Maps for spatial queries, facetted type search, support for RSS (Really Simple Syndication) delivery of search results, and enhanced customization to meet the needs of the multiple projects that use Mercury. It provides a single portal to very quickly search for data and information contained in disparate data management systems, each of which may use different metadata formats. Mercury harvests metadata and key data from contributing project servers distributed around the world and builds a centralized index. The search interfaces then allow the users to perform a variety of fielded, spatial, and temporal searches across these metadata sources. This centralized repository of metadata with distributed data sources provides extremely fast search results to the user, while allowing data providers to advertise the availability of their data and maintain complete control and ownership of that data. Mercury periodically (typically daily)harvests metadata sources through a collection of interfaces and re-indexes these metadata to provide extremely rapid search capabilities, even over collections with tens of millions of metadata records. A number of both graphical and application interfaces have been constructed within Mercury, to enable both human users and other computer programs to perform queries. Mercury was also designed to support multiple different projects, so that the particular fields that can be queried and used with search filters are easy to configure for each different project.

  7. Mercury Toolset for Spatiotemporal Metadata

    Science.gov (United States)

    Wilson, Bruce E.; Palanisamy, Giri; Devarakonda, Ranjeet; Rhyne, B. Timothy; Lindsley, Chris; Green, James

    2010-01-01

    Mercury (http://mercury.ornl.gov) is a set of tools for federated harvesting, searching, and retrieving metadata, particularly spatiotemporal metadata. Version 3.0 of the Mercury toolset provides orders of magnitude improvements in search speed, support for additional metadata formats, integration with Google Maps for spatial queries, facetted type search, support for RSS (Really Simple Syndication) delivery of search results, and enhanced customization to meet the needs of the multiple projects that use Mercury. It provides a single portal to very quickly search for data and information contained in disparate data management systems, each of which may use different metadata formats. Mercury harvests metadata and key data from contributing project servers distributed around the world and builds a centralized index. The search interfaces then allow the users to perform a variety of fielded, spatial, and temporal searches across these metadata sources. This centralized repository of metadata with distributed data sources provides extremely fast search results to the user, while allowing data providers to advertise the availability of their data and maintain complete control and ownership of that data. Mercury periodically (typically daily) harvests metadata sources through a collection of interfaces and re-indexes these metadata to provide extremely rapid search capabilities, even over collections with tens of millions of metadata records. A number of both graphical and application interfaces have been constructed within Mercury, to enable both human users and other computer programs to perform queries. Mercury was also designed to support multiple different projects, so that the particular fields that can be queried and used with search filters are easy to configure for each different project.

  8. ATLAS Metadata Interface (AMI), a generic metadata framework

    CERN Document Server

    Fulachier, Jerome; The ATLAS collaboration

    2016-01-01

    The ATLAS Metadata Interface (AMI) is a mature application of more than 15 years of existence. Mainly used by the ATLAS experiment at CERN, it consists of a very generic tool ecosystem for metadata aggregation and cataloguing. We briefly describe the architecture, the main services and the benefits of using AMI in big collaborations, especially for high energy physics. We focus on the recent improvements, for instance: the lightweight clients (Python, Javascript, C++), the new smart task server system and the Web 2.0 AMI framework for simplifying the development of metadata-oriented web interfaces.

  9. ATLAS Metadata Interface (AMI), a generic metadata framework

    Science.gov (United States)

    Fulachier, J.; Odier, J.; Lambert, F.; ATLAS Collaboration

    2017-10-01

    The ATLAS Metadata Interface (AMI) is a mature application of more than 15 years of existence. Mainly used by the ATLAS experiment at CERN, it consists of a very generic tool ecosystem for metadata aggregation and cataloguing. We briefly describe the architecture, the main services and the benefits of using AMI in big collaborations, especially for high energy physics. We focus on the recent improvements, for instance: the lightweight clients (Python, JavaScript, C++), the new smart task server system and the Web 2.0 AMI framework for simplifying the development of metadata-oriented web interfaces.

  10. ATLAS Metadata Interface (AMI), a generic metadata framework

    CERN Document Server

    AUTHOR|(SzGeCERN)573735; The ATLAS collaboration; Odier, Jerome; Lambert, Fabian

    2017-01-01

    The ATLAS Metadata Interface (AMI) is a mature application of more than 15 years of existence. Mainly used by the ATLAS experiment at CERN, it consists of a very generic tool ecosystem for metadata aggregation and cataloguing. We briefly describe the architecture, the main services and the benefits of using AMI in big collaborations, especially for high energy physics. We focus on the recent improvements, for instance: the lightweight clients (Python, JavaScript, C++), the new smart task server system and the Web 2.0 AMI framework for simplifying the development of metadata-oriented web interfaces.

  11. Comparison and evaluation of the roles of tomato farmer cooperatives in Taiwan and The Netherlands

    NARCIS (Netherlands)

    Lin, B.-S.

    2012-01-01

    Tomato is one of the most popular vegetables all over the world and the production was 145 million tonnes in 2011. In Taiwan and The Netherlands, tomato also became an important vegetable nowadays. In both countries, the farmer cooperatives are the way to help farmers accessing markets. However,

  12. Metadata Dictionary Database: A Proposed Tool for Academic Library Metadata Management

    Science.gov (United States)

    Southwick, Silvia B.; Lampert, Cory

    2011-01-01

    This article proposes a metadata dictionary (MDD) be used as a tool for metadata management. The MDD is a repository of critical data necessary for managing metadata to create "shareable" digital collections. An operational definition of metadata management is provided. The authors explore activities involved in metadata management in…

  13. The metadata manual a practical workbook

    CERN Document Server

    Lubas, Rebecca; Schneider, Ingrid

    2013-01-01

    Cultural heritage professionals have high levels of training in metadata. However, the institutions in which they practice often depend on support staff, volunteers, and students in order to function. With limited time and funding for training in metadata creation for digital collections, there are often many questions about metadata without a reliable, direct source for answers. The Metadata Manual provides such a resource, answering basic metadata questions that may appear, and exploring metadata from a beginner's perspective. This title covers metadata basics, XML basics, Dublin Core, VRA C

  14. METADATA, DESKRIPSI SERTA TITIK AKSESNYA DAN INDOMARC

    Directory of Open Access Journals (Sweden)

    Sulistiyo Basuki

    2012-07-01

    Full Text Available lstilah metadata mulai sering muncul dalam literature tentang database management systems (DBMS pada tahun 1980 an. lstilah tersebut digunakan untuk menggambarkan informasi yang diperlukan untuk mencatat karakteristik informasi yang terdapat pada pangkalan data. Banyak sumber yang mengartikan istilah metadata. Metadata dapat diartikan sumber, menunjukan lokasi dokumen, serta memberikan ringkasan yang diperlukan untuk memanfaat-kannya. Secara umum ada 3 bagian yang digunakan untuk membuat metadata sebagai sebuah paket informasi, dan penyandian (encoding pembuatan deskripsi paket informasi, dan penyediaan akses terhadap deskripsi tersebut. Dalam makalah ini diuraikan mengenai konsep data dalam kaitannya dengan perpustakaan. Uraian meliputi definisi metadata; fungsi metadata; standar penyandian (encoding, cantuman bibliografis. surogat, metadata; penciptaan isi cantuman surogat; ancangan terhadap format metadata; serta metadata dan standar metadata.

  15. FSA 2002 Digital Orthophoto Metadata

    Data.gov (United States)

    Minnesota Department of Natural Resources — Metadata for the 2002 FSA Color Orthophotos Layer. Each orthophoto is represented by a Quarter 24k Quad tile polygon. The polygon attributes contain the quarter-quad...

  16. Zesty Tomato Soup

    Science.gov (United States)

    ... https://medlineplus.gov/recipe/zestytomatosoup.html Zesty Tomato Soup To use the sharing features on this page, ... Number of Servings: 4 Not your traditional tomato soup, this quick-cooking dish can be a side ...

  17. Tomato contact dermatitis

    DEFF Research Database (Denmark)

    Paulsen, Evy; Christensen, Lars P; Andersen, Klaus Ejner

    2012-01-01

    The tomato plant (Solanum lycopersicum) is an important crop worldwide. Whereas immediate-type reactions to tomato fruits are well known, contact dermatitis caused by tomatoes or tomato plants is rarely reported. The aims of this study were to present new data on contact sensitization to tomato...... plants and review the literature on contact dermatitis caused by both plants and fruits. An ether extract of tomato plants made as the original oleoresin plant extracts, was used in aimed patch testing, and between 2005 and 2011. 8 of 93 patients (9%) tested positive to the oleoresin extracts....... This prevalence is in accordance with the older literature that reports tomato plants as occasional sensitizers. The same applies to tomato fruits, which, in addition, may cause protein contact dermatitis. The allergens of the plant are unknown, but both heat-stable and heat-labile constituents seem...

  18. How libraries use publisher metadata

    Directory of Open Access Journals (Sweden)

    Steve Shadle

    2013-11-01

    Full Text Available With the proliferation of electronic publishing, libraries are increasingly relying on publisher-supplied metadata to meet user needs for discovery in library systems. However, many publisher/content provider staff creating metadata are unaware of the end-user environment and how libraries use their metadata. This article provides an overview of the three primary discovery systems that are used by academic libraries, with examples illustrating how publisher-supplied metadata directly feeds into these systems and is used to support end-user discovery and access. Commonly seen metadata problems are discussed, with recommendations suggested. Based on a series of presentations given in Autumn 2012 to the staff of a large publisher, this article uses the University of Washington Libraries systems and services as illustrative examples. Judging by the feedback received from these presentations, publishers (specifically staff not familiar with the big picture of metadata standards work would benefit from a better understanding of the systems and services libraries provide using the data that is created and managed by publishers.

  19. Vegetation (MCV / NVCS) Mapping Projects - California [ds515

    Data.gov (United States)

    California Natural Resource Agency — This metadata layer shows the footprint of vegetation mapping projects completed in California that have used the Manual California of Vegetation ( MCV 1st edition)...

  20. An integrated overview of metadata in ATLAS

    International Nuclear Information System (INIS)

    Gallas, E J; Malon, D; Hawkings, R J; Albrand, S; Torrence, E

    2010-01-01

    Metadata (data about data) arise in many contexts, from many diverse sources, and at many levels in ATLAS. Familiar examples include run-level, luminosity-block-level, and event-level metadata, and, related to processing and organization, dataset-level and file-level metadata, but these categories are neither exhaustive nor orthogonal. Some metadata are known a priori, in advance of data taking or simulation; other metadata are known only after processing, and occasionally, quite late (e.g., detector status or quality updates that may appear after initial reconstruction is complete). Metadata that may seem relevant only internally to the distributed computing infrastructure under ordinary conditions may become relevant to physics analysis under error conditions ('What can I discover about data I failed to process?'). This talk provides an overview of metadata and metadata handling in ATLAS, and describes ongoing work to deliver integrated metadata services in support of physics analysis.

  1. Physicochemical and microbiological evaluation of sun dried tomatoes in comparison with fresh tomatoes

    International Nuclear Information System (INIS)

    Sohail, M.

    2011-01-01

    The present study was conducted to evaluate the quality of sun dried tomatoes in comparison with fresh tomatoes. Fresh fully ripen tomatoes were washed and cut in thin slices with sterilized stainless steel knife and divided into two lots, one was taken as control and other was dipped in 3% potassium meta bisulfite solution for 5 minutes. The samples were spread over stainless steel trays covered with muslin cloth and kept in solar dehydrator for 5 days at 55 +- 2 deg. C. The physicochemical analyses were carried out in both dried and fresh (control) tomatoes. They were also analyzed microbiologically for bacterial and fugal count. Results showed that sun dried tomatoes are microbiologically safe. The values of moisture content and vitamin C of fresh and sun dried tomatoes statistically differ from each others at probability level of 5 %. The nutrient which is highly affected by sun drying is vitamin C. In fresh tomatoes it was 32.5 mg/100 g which is reduced to 24.6 mg/100 g after sun drying and further reduced to 15.86 mg/100 g during three months storage. The moisture content of the fresh tomatoes was 94.4% which decreased to 8.15% after drying, and then slowly increased to 9.95% in the three months storage. Statistically no major difference was found in the other nutrients during storage, which indicates that sun drying is nutritionally and microbiologically safe and can be used to preserve tomatoes and other fruits and vegetables for off season use. (author)

  2. On the Origin of Metadata

    Directory of Open Access Journals (Sweden)

    Sam Coppens

    2012-12-01

    Full Text Available Metadata has been around and has evolved for centuries, albeit not recognized as such. Medieval manuscripts typically had illuminations at the start of each chapter, being both a kind of signature for the author writing the script and a pictorial chapter anchor for the illiterates at the time. Nowadays, there is so much fragmented information on the Internet that users sometimes fail to distinguish the real facts from some bended truth, let alone being able to interconnect different facts. Here, the metadata can both act as noise-reductors for detailed recommendations to the end-users, as it can be the catalyst to interconnect related information. Over time, metadata thus not only has had different modes of information, but furthermore, metadata’s relation of information to meaning, i.e., “semantics”, evolved. Darwin’s evolutionary propositions, from “species have an unlimited reproductive capacity”, over “natural selection”, to “the cooperation of mutations leads to adaptation to the environment” show remarkable parallels to both metadata’s different modes of information and to its relation of information to meaning over time. In this paper, we will show that the evolution of the use of (metadata can be mapped to Darwin’s nine evolutionary propositions. As mankind and its behavior are products of an evolutionary process, the evolutionary process of metadata with its different modes of information is on the verge of a new-semantic-era.

  3. THE NEW ONLINE METADATA EDITOR FOR GENERATING STRUCTURED METADATA

    Energy Technology Data Exchange (ETDEWEB)

    Devarakonda, Ranjeet [ORNL; Shrestha, Biva [ORNL; Palanisamy, Giri [ORNL; Hook, Leslie A [ORNL; Killeffer, Terri S [ORNL; Boden, Thomas A [ORNL; Cook, Robert B [ORNL; Zolly, Lisa [United States Geological Service (USGS); Hutchison, Viv [United States Geological Service (USGS); Frame, Mike [United States Geological Service (USGS); Cialella, Alice [Brookhaven National Laboratory (BNL); Lazer, Kathy [Brookhaven National Laboratory (BNL)

    2014-01-01

    Nobody is better suited to describe data than the scientist who created it. This description about a data is called Metadata. In general terms, Metadata represents the who, what, when, where, why and how of the dataset [1]. eXtensible Markup Language (XML) is the preferred output format for metadata, as it makes it portable and, more importantly, suitable for system discoverability. The newly developed ORNL Metadata Editor (OME) is a Web-based tool that allows users to create and maintain XML files containing key information, or metadata, about the research. Metadata include information about the specific projects, parameters, time periods, and locations associated with the data. Such information helps put the research findings in context. In addition, the metadata produced using OME will allow other researchers to find these data via Metadata clearinghouses like Mercury [2][4]. OME is part of ORNL s Mercury software fleet [2][3]. It was jointly developed to support projects funded by the United States Geological Survey (USGS), U.S. Department of Energy (DOE), National Aeronautics and Space Administration (NASA) and National Oceanic and Atmospheric Administration (NOAA). OME s architecture provides a customizable interface to support project-specific requirements. Using this new architecture, the ORNL team developed OME instances for USGS s Core Science Analytics, Synthesis, and Libraries (CSAS&L), DOE s Next Generation Ecosystem Experiments (NGEE) and Atmospheric Radiation Measurement (ARM) Program, and the international Surface Ocean Carbon Dioxide ATlas (SOCAT). Researchers simply use the ORNL Metadata Editor to enter relevant metadata into a Web-based form. From the information on the form, the Metadata Editor can create an XML file on the server that the editor is installed or to the user s personal computer. Researchers can also use the ORNL Metadata Editor to modify existing XML metadata files. As an example, an NGEE Arctic scientist use OME to register

  4. The Machinic Temporality of Metadata

    Directory of Open Access Journals (Sweden)

    Claudio Celis

    2015-03-01

    Full Text Available In 1990 Deleuze introduced the hypothesis that disciplinary societies are gradually being replaced by a new logic of power: control. Accordingly, Matteo Pasquinelli has recently argued that we are moving towards societies of metadata, which correspond to a new stage of what Deleuze called control societies. Societies of metadata are characterised for the central role that meta-information acquires both as a source of surplus value and as an apparatus of social control. The aim of this article is to develop Pasquinelli’s thesis by examining the temporal scope of these emerging societies of metadata. In particular, this article employs Guattari’s distinction between human and machinic times. Through these two concepts, this article attempts to show how societies of metadata combine the two poles of capitalist power formations as identified by Deleuze and Guattari, i.e. social subjection and machinic enslavement. It begins by presenting the notion of metadata in order to identify some of the defining traits of contemporary capitalism. It then examines Berardi’s account of the temporality of the attention economy from the perspective of the asymmetric relation between cyber-time and human time. The third section challenges Berardi’s definition of the temporality of the attention economy by using Guattari’s notions of human and machinic times. Parts four and five fall back upon Deleuze and Guattari’s notions of machinic surplus labour and machinic enslavement, respectively. The concluding section tries to show that machinic and human times constitute two poles of contemporary power formations that articulate the temporal dimension of societies of metadata.

  5. Survey of tomato diseases in Cameroon

    Directory of Open Access Journals (Sweden)

    Fontem, DA.

    1993-01-01

    Full Text Available Tomato (Lycopersicon esculentum Mill. is the most widely cultivated field vegetable crop in Cameroon. On-farm surveys were undertaken from November 1988 to October 1991 to identify nursery and field diseases in major tomato producing areas of Cameroon, Damping-off and seedling blights were the main seedling diseases. Of the eleven diseases observed in the field, the most widely distributed and severe on the foliage and fruits were early (Alternaria solani and late (Phytophthora infestans blights. Late blight was the most severe disease in the wet season while early blight was most severe in the dry season. Nine pathogens were associated with various fruit rots. This study indicates the need for an identification of appropriate control methods for early and late blights of tomato in Cameroon.

  6. Enriching The Metadata On CDS

    CERN Document Server

    Chhibber, Nalin

    2014-01-01

    The project report revolves around the open source software package called Invenio. It provides the tools for management of digital assets in a repository and drives CERN Document Server. Primary objective is to enhance the existing metadata in CDS with data from other libraries. An implicit part of this task is to manage disambiguation (within incoming data), removal of multiple entries and handle replications between new and existing records. All such elements and their corresponding changes are integrated within Invenio to make the upgraded metadata available on the CDS. Latter part of the report discuss some changes related to the Invenio code-base itself.

  7. Effect of diets fortified with tomatoes or onions with variable quercetin-glycoside content on azoxymethane-induced aberrant crypt foci in the colon of rats

    NARCIS (Netherlands)

    Femia, A.P.; Caderni, G.; Ianni, M.; Salvadori, M.; Schijlen, E.G.W.M.; Collins, G.; Bovy, A.G.; Dolara, P.

    2003-01-01

    Background: Onion and tomato are vegetables widely consumed by humans and epidemiological studies show an inverse association between vegetable consumption and colon cancer risk; however, the effect on colon cancer of diets containing high levels of vegetables like onion and tomato are not clear.

  8. The PDS4 Metadata Management System

    Science.gov (United States)

    Raugh, A. C.; Hughes, J. S.

    2018-04-01

    We present the key features of the Planetary Data System (PDS) PDS4 Information Model as an extendable metadata management system for planetary metadata related to data structure, analysis/interpretation, and provenance.

  9. U.S. EPA Metadata Editor (EME)

    Data.gov (United States)

    U.S. Environmental Protection Agency — The EPA Metadata Editor (EME) allows users to create geospatial metadata that meets EPA's requirements. The tool has been developed as a desktop application that...

  10. Controle da pinta-preta em tomateiro e da mancha-zonada em pepino por meio de bicarbonato de sódio e óleo vegetal Control of early blight on tomato and net spot on cucumber through application of sodium bicarbonate and vegetal oil

    Directory of Open Access Journals (Sweden)

    Juan Roberto Ramírez-Otárola Sarmiento

    1999-07-01

    ística significativa entre iprodione e bicarbonato de sódio. Para a mancha-zonada o tratamento com benomil diminuiu a taxa de desenvolvimento da doença, enquanto que o bicarbonato de sódio não teve efeito. Os resultados obtidos no presente trabalho sugerem que o bicarbonato de sódio e óleo vegetal são substâncias que apresentam potencial para o controle da pinta-preta e mancha-zonada, necessitando porém, de novos estudos.Two experiments were carried out under field conditions at UNESP/FCAV, Jaboticabal, São Paulo state, Brazil. In the first experiment (from May to October, 1993 the efficiency of weekly sprays of sodium bicarbonate (1%, vegetal oil (1% and iprodione (0.075%, alone or in combination, were studied for the control of tomato early blight (Alternaria solani, using tomato cv. Jumbo AG-592. In the second experiment (March to June, 1993 the efficiency of weekly sprays of different doses of sodium bicarbonate (0.5, 1 and 1.5% were compared with benomyl (0.05%, on the control of cucumber net spot (Leandria momordicae, using cucumber cv. Premier. The experiments followed a randomised block design with four replications and forty plants distributed in four rows of 5.0 and 2.5 m long used respectively for cucumber and tomato. Disease severity on tomate was rated at 14 day intervals (the first five and at 7 day intervals (the last two, beginning 39 days after transplanting. Disease severity for cucumber net spot was rated five times, at 14 day intervals, beginning 28 days after transplanting. Disease progress curves for each treatment for each culture were determined. Fruit yield for each culture was also evaluated. Results showed that evaluation of disease severity in the fifth leaf and logistic transformation were most suitable for the study of tomato early blight epidemics. For cucumber net spot, evaluation in the fourth leaf and logistic transformation were the most suitable, as shown by the determination coefficient values. Both iprodione and sodium bicarbonate

  11. Radiological dose and metadata management

    International Nuclear Information System (INIS)

    Walz, M.; Madsack, B.; Kolodziej, M.

    2016-01-01

    This article describes the features of management systems currently available in Germany for extraction, registration and evaluation of metadata from radiological examinations, particularly in the digital imaging and communications in medicine (DICOM) environment. In addition, the probable relevant developments in this area concerning radiation protection legislation, terminology, standardization and information technology are presented. (orig.) [de

  12. Biological Control of Anthracnose Disease of Tomato Using Ethanolic Extracts of Azadirachta Indica and Nicotiana Tabacum

    OpenAIRE

    Opeyemi, Bankole Samuel; Temidayo, Bankole Ruth; Babalola, Yetunde Oyinkansade; Emmanuel, Ilerioluwa Busayo; Ojubolamo, Motunrayo Temitope; Folake, Awotedu Bolakale

    2018-01-01

    Tomato is a commercially important vegetable throughout the whole world and its availability all the year is grossly affected by anthracnose disease, hence, the need for an effective bio-control that is affordable and user friendly. This study therefore investigated the inhibitory effect of ethanol extracts of Azadirachta indica and Tabacum nicotianaon the mycelium growth of fungi associated with anthracnose disease of tomato. Tomatoes that showed black circular lesions with concentric ring a...

  13. Modelling of tomato stem diameter growth rate based on physiological responses

    International Nuclear Information System (INIS)

    Li, L.; Tan, J.; Lv, T.

    2017-01-01

    The stem diameter is an important parameter describing the growth of tomato plant during vegetative growth stage. A stem diameter growth model was developed to predict the response of plant growth under different conditions. By analyzing the diurnal variations of stem diameter in tomato (Solanum lycopersicum L.), it was found that the stem diameter measured at 3:00 am was the representative value as the daily basis of tomato stem diameter. Based on the responses of growth rate in stem diameter to light and temperature, a linear regression relationship was applied to establish the stem diameter growth rate prediction model for the vegetative growth stage in tomato and which was further validated by experiment. The root mean square error (RMSE) and relative error (RE) were used to test the correlation between measured and modeled stem diameter variations. Results showed that the model can be used in prediction for stem diameter growth rate at vegetative growth stage in tomato. (author)

  14. The essential guide to metadata for books

    CERN Document Server

    Register, Renee

    2013-01-01

    In The Essential Guide to Metadata for Books, you will learn exactly what you need to know to effectively generate, handle and disseminate metadata for books and ebooks. This comprehensive but digestible document will explain the life-cycle of book metadata, industry standards, XML, ONIX and the essential elements of metadata. It will also show you how effective, well-organized metadata can improve your efforts to sell a book, especially when it comes to marketing, discoverability and converting at the point of sale. This information-packed document also includes a glossary of terms

  15. Metadata Life Cycles, Use Cases and Hierarchies

    Directory of Open Access Journals (Sweden)

    Ted Habermann

    2018-05-01

    Full Text Available The historic view of metadata as “data about data” is expanding to include data about other items that must be created, used, and understood throughout the data and project life cycles. In this context, metadata might better be defined as the structured and standard part of documentation, and the metadata life cycle can be described as the metadata content that is required for documentation in each phase of the project and data life cycles. This incremental approach to metadata creation is similar to the spiral model used in software development. Each phase also has distinct users and specific questions to which they need answers. In many cases, the metadata life cycle involves hierarchies where latter phases have increased numbers of items. The relationships between metadata in different phases can be captured through structure in the metadata standard, or through conventions for identifiers. Metadata creation and management can be streamlined and simplified by re-using metadata across many records. Many of these ideas have been developed to various degrees in several Geoscience disciplines and are being used in metadata for documenting the integrated life cycle of environmental research in the Arctic, including projects, collection sites, and datasets.

  16. Susceptibility of the Tomato Mutant High Pigment-2dg (hp-2dg) to Orobanche spp. Infection

    NARCIS (Netherlands)

    Lopez Raez, J.A.; Charnikhova, T.; Mulder, P.P.J.; Kohlen, W.; Bino, R.J.; Levin, I.; Bouwmeester, H.J.

    2008-01-01

    The consumption of natural products with potential health benefits has been continuously growing, and enhanced pigmentation is of major economic importance in fruits and vegetables. The tomato hp-2dg is an important mutant line that has been introgressed into commercial tomato cultivars marketed as

  17. Evaluation of tomato genotypes for resistance to root-knot nematodes

    African Journals Online (AJOL)

    Tomato (Solanum lycopersicum) is one of the most popular vegetable crops worldwide, owing to its high nutritive value and diversified use. Tomato production in Ghana is threatened by plant parasitic nematodes, especially the root knot nematodes (Meloidogyne spp.), which are responsible for huge economic yield losses.

  18. Log-Less Metadata Management on Metadata Server for Parallel File Systems

    Directory of Open Access Journals (Sweden)

    Jianwei Liao

    2014-01-01

    Full Text Available This paper presents a novel metadata management mechanism on the metadata server (MDS for parallel and distributed file systems. In this technique, the client file system backs up the sent metadata requests, which have been handled by the metadata server, so that the MDS does not need to log metadata changes to nonvolatile storage for achieving highly available metadata service, as well as better performance improvement in metadata processing. As the client file system backs up certain sent metadata requests in its memory, the overhead for handling these backup requests is much smaller than that brought by the metadata server, while it adopts logging or journaling to yield highly available metadata service. The experimental results show that this newly proposed mechanism can significantly improve the speed of metadata processing and render a better I/O data throughput, in contrast to conventional metadata management schemes, that is, logging or journaling on MDS. Besides, a complete metadata recovery can be achieved by replaying the backup logs cached by all involved clients, when the metadata server has crashed or gone into nonoperational state exceptionally.

  19. DEVELOPMENT OF A METADATA MANAGEMENT SYSTEM FOR AN INTERDISCIPLINARY RESEARCH PROJECT

    Directory of Open Access Journals (Sweden)

    C. Curdt

    2012-07-01

    Full Text Available In every interdisciplinary, long-term research project it is essential to manage and archive all heterogeneous research data, produced by the project participants during the project funding. This has to include sustainable storage, description with metadata, easy and secure provision, back up, and visualisation of all data. To ensure the accurate description of all project data with corresponding metadata, the design and implementation of a metadata management system is a significant duty. Thus, the sustainable use and search of all research results during and after the end of the project is particularly dependent on the implementation of a metadata management system. Therefore, this paper will describe the practical experiences gained during the development of a scientific research data management system (called the TR32DB including the corresponding metadata management system for the multidisciplinary research project Transregional Collaborative Research Centre 32 (CRC/TR32 'Patterns in Soil-Vegetation-Atmosphere Systems'. The entire system was developed according to the requirements of the funding agency, the user and project requirements, as well as according to recent standards and principles. The TR32DB is basically a combination of data storage, database, and web-interface. The metadata management system was designed, realized, and implemented to describe and access all project data via accurate metadata. Since the quantity and sort of descriptive metadata depends on the kind of data, a user-friendly multi-level approach was chosen to cover these requirements. Thus, the self-developed CRC/TR32 metadata framework is designed. It is a combination of general, CRC/TR32 specific, as well as data type specific properties.

  20. Functional genomics of tomato

    Indian Academy of Sciences (India)

    2014-10-20

    Oct 20, 2014 ... 1Repository of Tomato Genomics Resources, Department of Plant Sciences, School .... Due to its position at the crossroads of Sanger's sequencing .... replacement for the microarray-based expression profiling. .... during RNA fragmentation step prior to library construction, ...... tomato pollen as a test case.

  1. Evolution in Metadata Quality: Common Metadata Repository's Role in NASA Curation Efforts

    Science.gov (United States)

    Gilman, Jason; Shum, Dana; Baynes, Katie

    2016-01-01

    Metadata Quality is one of the chief drivers of discovery and use of NASA EOSDIS (Earth Observing System Data and Information System) data. Issues with metadata such as lack of completeness, inconsistency, and use of legacy terms directly hinder data use. As the central metadata repository for NASA Earth Science data, the Common Metadata Repository (CMR) has a responsibility to its users to ensure the quality of CMR search results. This poster covers how we use humanizers, a technique for dealing with the symptoms of metadata issues, as well as our plans for future metadata validation enhancements. The CMR currently indexes 35K collections and 300M granules.

  2. phosphorus retention data and metadata

    Science.gov (United States)

    phosphorus retention in wetlands data and metadataThis dataset is associated with the following publication:Lane , C., and B. Autrey. Phosphorus retention of forested and emergent marsh depressional wetlands in differing land uses in Florida, USA. Wetlands Ecology and Management. Springer Science and Business Media B.V;Formerly Kluwer Academic Publishers B.V., GERMANY, 24(1): 45-60, (2016).

  3. Finding Atmospheric Composition (AC) Metadata

    Science.gov (United States)

    Strub, Richard F..; Falke, Stefan; Fiakowski, Ed; Kempler, Steve; Lynnes, Chris; Goussev, Oleg

    2015-01-01

    The Atmospheric Composition Portal (ACP) is an aggregator and curator of information related to remotely sensed atmospheric composition data and analysis. It uses existing tools and technologies and, where needed, enhances those capabilities to provide interoperable access, tools, and contextual guidance for scientists and value-adding organizations using remotely sensed atmospheric composition data. The initial focus is on Essential Climate Variables identified by the Global Climate Observing System CH4, CO, CO2, NO2, O3, SO2 and aerosols. This poster addresses our efforts in building the ACP Data Table, an interface to help discover and understand remotely sensed data that are related to atmospheric composition science and applications. We harvested GCMD, CWIC, GEOSS metadata catalogs using machine to machine technologies - OpenSearch, Web Services. We also manually investigated the plethora of CEOS data providers portals and other catalogs where that data might be aggregated. This poster is our experience of the excellence, variety, and challenges we encountered.Conclusions:1.The significant benefits that the major catalogs provide are their machine to machine tools like OpenSearch and Web Services rather than any GUI usability improvements due to the large amount of data in their catalog.2.There is a trend at the large catalogs towards simulating small data provider portals through advanced services. 3.Populating metadata catalogs using ISO19115 is too complex for users to do in a consistent way, difficult to parse visually or with XML libraries, and too complex for Java XML binders like CASTOR.4.The ability to search for Ids first and then for data (GCMD and ECHO) is better for machine to machine operations rather than the timeouts experienced when returning the entire metadata entry at once. 5.Metadata harvest and export activities between the major catalogs has led to a significant amount of duplication. (This is currently being addressed) 6.Most (if not all

  4. Greenhouse Tomato Producers’ Views on Soilless Agriculture in Antalya

    Directory of Open Access Journals (Sweden)

    Bilge Gözener

    2018-04-01

    Full Text Available Tomato comes as the most commonly produced, consumed and subject for trading in the world. Alongside fresh consumption, on the other hand it forms the most significant raw material source of food industry, especially for tomato paste, frozen and dried vegetable-fruit and canned food industry. Turkey's greenhouse vegetable production field for 2016 year is 675173 decars and Antalya forms 51% of this field. Tomato forms 61.72% of Antalya's greenhouse production. The main material of the research consists of interviews made with producers resided in 5 villages/towns, where greenhouse tomato production is carried out densely in Antalya city, Alanya district. In 48 villages and towns, greenhouse tomato production is carried out, according to the official records. In the chosen areas, 365 producers exist. 20% of these producers (73 form the sample size. In the research, it was determined that the producers' average agricultural land possession is 9.13 decars and in 40.53% of these areas they grew tomatoes. None of these producers are engaged in contractual growing. All of the yield is produced for the edible (as table-top item. After the harvest, all of the products are sold in the wholesales market in county and city. 7.89% of the producers have no information on soilless agriculture, as 10.52% of them think that it has no advantages and 73.36% of them recommend traditional agriculture.

  5. The role of natural antibiotics in storage diseases resistance in irradiated tomato fruits

    International Nuclear Information System (INIS)

    Sharaway, N.S.M.

    1981-01-01

    Tomato (lycopersicum esculantum L.) is one of the most important vegetable crops in egypt. Fruit rot, mainly due to fungi, are essential obstacles facing the nowadays prejects plannings of the yield production and exportation. Tomato fruits, variety money maker at green mature exposed to acute gamma irradiation doses at 5, 10, 20, 30 and 100 K rad after inoculated with spore suspension of alternaria tenuis , the main casual organism of fruit rot of tomato and control without inoculation. The source of irradiation was cobalt 60. After irradiation , 50 tomato fruits were packed into exporting carton boxes and then were stored at room temperature

  6. Influence of Inter-Intra Row Spacing on Yield Losses of Tomato ...

    African Journals Online (AJOL)

    losses of tomato growing under open field production with fresh market (Bishola) and processing ..... AVRDC. 2003. Asian Vegetable Research and Development Centre, Shanhua, Tainan, progress ... Australia national universities. 20: 1.

  7. Add More Vegetables to Your Day: 10 Tips to Help You Eat More Vegetables

    Science.gov (United States)

    ... sip on some vegetable soup Heat it and eat it. Try tomato, butternut squash, or garden vegetable soup. Look for reduced- or low-sodium soups. Make your own soups with a low-sodium broth and your favorite vegetables. 8 while you’re out If dinner is away from home, no need to worry. ...

  8. XML for catalogers and metadata librarians

    CERN Document Server

    Cole, Timothy W

    2013-01-01

    How are today's librarians to manage and describe the everexpanding volumes of resources, in both digital and print formats? The use of XML in cataloging and metadata workflows can improve metadata quality, the consistency of cataloging workflows, and adherence to standards. This book is intended to enable current and future catalogers and metadata librarians to progress beyond a bare surfacelevel acquaintance with XML, thereby enabling them to integrate XML technologies more fully into their cataloging workflows. Building on the wealth of work on library descriptive practices, cataloging, and metadata, XML for Catalogers and Metadata Librarians explores the use of XML to serialize, process, share, and manage library catalog and metadata records. The authors' expert treatment of the topic is written to be accessible to those with little or no prior practical knowledge of or experience with how XML is used. Readers will gain an educated appreciation of the nuances of XML and grasp the benefit of more advanced ...

  9. Security in a Replicated Metadata Catalogue

    CERN Document Server

    Koblitz, B

    2007-01-01

    The gLite-AMGA metadata has been developed by NA4 to provide simple relational metadata access for the EGEE user community. As advanced features, which will be the focus of this presentation, AMGA provides very fine-grained security also in connection with the built-in support for replication and federation of metadata. AMGA is extensively used by the biomedical community to store medical images metadata, digital libraries, in HEP for logging and bookkeeping data and in the climate community. The biomedical community intends to deploy a distributed metadata system for medical images consisting of various sites, which range from hospitals to computing centres. Only safe sharing of the highly sensitive metadata as provided in AMGA makes such a scenario possible. Other scenarios are digital libraries, which federate copyright protected (meta-) data into a common catalogue. The biomedical and digital libraries have been deployed using a centralized structure already for some time. They now intend to decentralize ...

  10. Technologies for metadata management in scientific a

    OpenAIRE

    Castro-Romero, Alexander; González-Sanabria, Juan S.; Ballesteros-Ricaurte, Javier A.

    2015-01-01

    The use of Semantic Web technologies has been increasing, so it is common using them in different ways. This article evaluates how these technologies can contribute to improve the indexing in articles in scientific journals. Initially, there is a conceptual review about metadata. Later, studying the most important technologies for the use of metadata in Web and, this way, choosing one of them to apply it in the case of study of scientific articles indexing, in order to determine the metadata ...

  11. 21 CFR 155.190 - Canned tomatoes.

    Science.gov (United States)

    2010-04-01

    ... tomatoes. (a) Identity—(1) Description. (i) Canned tomatoes is the food prepared from mature tomatoes...). Without shifting the tomatoes, so incline the sieve as to facilitate drainage of the liquid. Two minutes...

  12. Tomato and tomato byproducts. Human health benefits of lycopene and its application to meat products: a review.

    Science.gov (United States)

    Viuda-Martos, M; Sanchez-Zapata, E; Sayas-Barberá, E; Sendra, E; Pérez-Álvarez, J A; Fernández-López, J

    2014-01-01

    During recent decades, the food industry, consumers, and regulatory authorities have developed a significant interest in functional foods because of their potential benefits for human health over and above their basic nutritional value. Tomato is the second most important vegetable crop in the world. The amount of the related wastes is estimated at up to 50,000 tons per year, representing a serious disposal problem with a consequent negative impact on the environment. Tomato byproducts contain a great variety of biologically active substances, principally lycopene, which have been demonstrated by in vitro and in vivo studies to possess antioxidant, hypolipidemic, and anticarcinogenic activities. The aim of this review is to present an overview of the functional and physiological properties of the principal bioactive compound present in tomato and tomato byproducts, lycopene, its addition to meat, and meat products.

  13. Critical Metadata for Spectroscopy Field Campaigns

    Directory of Open Access Journals (Sweden)

    Barbara A. Rasaiah

    2014-04-01

    Full Text Available A field spectroscopy metadata standard is defined as those data elements that explicitly document the spectroscopy dataset and field protocols, sampling strategies, instrument properties and environmental and logistical variables. Standards for field spectroscopy metadata affect the quality, completeness, reliability, and usability of datasets created in situ. Currently there is no standardized methodology for documentation of in situ spectroscopy data or metadata. This paper presents results of an international experiment comprising a web-based survey and expert panel evaluation that investigated critical metadata in field spectroscopy. The survey participants were a diverse group of scientists experienced in gathering spectroscopy data across a wide range of disciplines. Overall, respondents were in agreement about a core metadataset for generic campaign metadata, allowing for a prioritization of critical metadata elements to be proposed including those relating to viewing geometry, location, general target and sampling properties, illumination, instrument properties, reference standards, calibration, hyperspectral signal properties, atmospheric conditions, and general project details. Consensus was greatest among individual expert groups in specific application domains. The results allow the identification of a core set of metadata fields that enforce long term data storage and serve as a foundation for a metadata standard. This paper is part one in a series about the core elements of a robust and flexible field spectroscopy metadata standard.

  14. Evaluating the privacy properties of telephone metadata

    Science.gov (United States)

    Mayer, Jonathan; Mutchler, Patrick; Mitchell, John C.

    2016-01-01

    Since 2013, a stream of disclosures has prompted reconsideration of surveillance law and policy. One of the most controversial principles, both in the United States and abroad, is that communications metadata receives substantially less protection than communications content. Several nations currently collect telephone metadata in bulk, including on their own citizens. In this paper, we attempt to shed light on the privacy properties of telephone metadata. Using a crowdsourcing methodology, we demonstrate that telephone metadata is densely interconnected, can trivially be reidentified, and can be used to draw sensitive inferences. PMID:27185922

  15. Presença dos gêneros Trichoderma e Fusarium em solo rizosférico e não rizosférico cultivado com tomateiro e pepineiro, em horta e estufa Presence of the genus Trichoderma and Fusarium in rhizosphere and bulk soil cultivated with tomato and cucumber, in vegetable garden and greenhouse

    Directory of Open Access Journals (Sweden)

    Luciana Zago Ethur

    2008-02-01

    Full Text Available Para a elaboração adequada de programas de biocontrole de patógenos de solo, é necessário conhecer a distribuição de patógenos e antagonistas nesse ambiente. O objetivo deste trabalho foi estudar a presença dos gêneros Trichoderma e Fusarium em solo rizosférico e não-rizosférico, cultivado com tomateiro e pepineiro, em horta e estufa, e identificar os isolados de Fusarium spp. patogênicos às culturas. Para isso, em horta e estufa, foram realizadas 40 amostragens de solo rizosférico (tomateiro e pepineiro e 20 de solo não-rizosférico. As suspensões dos solos foram diluídas, incubadas em meio BDA e os fungos identificados. Posteriormente, foi realizado o teste de patogenicidade para o tomateiro e o pepineiro, com os isolados de Fusarium spp. obtidos dos solos coletados. Em estufa, para o tomateiro e para o pepineiro, o número de pontos de amostragem com a presença de Trichoderma spp. em solo rizosférico foi significativamente maior (95 e 45%, respectivamente do que em solo não-rizosférico (10%. Neste ambiente, ocorreu diferença na presença de Trichoderma spp. e Fusarium spp., sendo encontrados, respectivamente, em 10 e 55% dos pontos de amostragem. No teste de patogenicidade, cinco isolados de Fusarium oxysporum do tomateiro e seis do pepineiro foram patogênicos às respectivas culturas. Em estufa, Trichoderma spp. ocorre com maior freqüência na rizosfera, enquanto Fusarium spp. está distribuído no solo, e a maioria dos isolados de Fusarium spp. não é patogênica ao tomateiro nem ao pepineiro.For the adequate elaboration of biocontrol programs of soil borne pathogens, it is necessary to understand the distribution of pathogens and antagonists in this environment. This research was aimed at studing the presence of the fungi Trichoderma and Fusarium in rhizosphere and bulk soil, cultivated with tomato and cucumber, in vegetable garden and greenhouse, and to quantify the isolates of Fusarium spp. pathogenic to the

  16. Effect of Tomato Industrial Processing on Phenolic Profile and Antiplatelet Activity

    Directory of Open Access Journals (Sweden)

    Iván Palomo

    2013-09-01

    Full Text Available Background: Regular consumption of fruits and vegetables (e.g., tomatoes has been shown to be beneficial in terms of reducing the incidence of cardiovascular diseases. The industrial processing of tomatoes into tomato-based products includes several thermal treatments. Very little is known on the effect of tomato industrial processing on antiaggregatory activity and phenolic profile. Methods: It was assessed the effect of tomato and by-products extracts on platelet aggregation induced by ADP, collagen, TRAP-6 and arachidonic acid. These in vitro antithrombotic properties were further supported in an in vivo model of thrombosis. A set of antiplatelet compounds has been selected for HPLC analysis in the different extracts. Results: Some natural compounds such as chlorogenic, caffeic, ferulic and p-coumaric acids were identified by HPLC in tomatoes and its products may inhibit platelet activation. Red tomatoes, tomato products (sauce, ketchup and juice and by-products extracts inhibited platelet aggregation induced adenosine 5'-diphosphate, collagen, thrombin receptor activator peptide-6 and arachidonic acid, but to a different extent. Also, pomace extract presents antithrombotic activity. Conclusions: Processed tomatoes may have a higher content of health-benefiting compounds than fresh ones. Pomace even presents the best antiplatelet activity. Finally, tomato products may be used as a functional ingredient adding antiplatelet activities to processed foods.

  17. Logic programming and metadata specifications

    Science.gov (United States)

    Lopez, Antonio M., Jr.; Saacks, Marguerite E.

    1992-01-01

    Artificial intelligence (AI) ideas and techniques are critical to the development of intelligent information systems that will be used to collect, manipulate, and retrieve the vast amounts of space data produced by 'Missions to Planet Earth.' Natural language processing, inference, and expert systems are at the core of this space application of AI. This paper presents logic programming as an AI tool that can support inference (the ability to draw conclusions from a set of complicated and interrelated facts). It reports on the use of logic programming in the study of metadata specifications for a small problem domain of airborne sensors, and the dataset characteristics and pointers that are needed for data access.

  18. octadecenoic acid in tomato

    African Journals Online (AJOL)

    User

    bly involved in plant defense responses is synthesized in tomato fruits and subjected to metabo- lism. Its catabolism or .... stored at -20°C. Enzymatic in vitro synthesis of radiolabeled ..... with nematicidal activity from Culture of basidiomycetes.

  19. Integrated Array/Metadata Analytics

    Science.gov (United States)

    Misev, Dimitar; Baumann, Peter

    2015-04-01

    Data comes in various forms and types, and integration usually presents a problem that is often simply ignored and solved with ad-hoc solutions. Multidimensional arrays are an ubiquitous data type, that we find at the core of virtually all science and engineering domains, as sensor, model, image, statistics data. Naturally, arrays are richly described by and intertwined with additional metadata (alphanumeric relational data, XML, JSON, etc). Database systems, however, a fundamental building block of what we call "Big Data", lack adequate support for modelling and expressing these array data/metadata relationships. Array analytics is hence quite primitive or non-existent at all in modern relational DBMS. Recognizing this, we extended SQL with a new SQL/MDA part seamlessly integrating multidimensional array analytics into the standard database query language. We demonstrate the benefits of SQL/MDA with real-world examples executed in ASQLDB, an open-source mediator system based on HSQLDB and rasdaman, that already implements SQL/MDA.

  20. 'Omics' approaches in tomato aimed at identifying candidate genes ...

    African Journals Online (AJOL)

    Tomato (Solanum lycopersicum) is one of the most important vegetables in the world with significant importance for human health and nutrition. This species has long served as model system for plant genetics, development, physiology, pathology, and fleshy fruit ripening, resulting in the accumulation of many genetic and ...

  1. Development of Infrared Radiation Heating Method for Sustainable Tomato Peeling

    Science.gov (United States)

    Although lye peeling is the widely industrialized method for producing high quality peeled fruit and vegetable products, the peeling method has resulted in negative impacts by significantly exerting both environmental and economic pressure on the tomato processing industry due to its associated sali...

  2. Leveraging Metadata to Create Better Web Services

    Science.gov (United States)

    Mitchell, Erik

    2012-01-01

    Libraries have been increasingly concerned with data creation, management, and publication. This increase is partly driven by shifting metadata standards in libraries and partly by the growth of data and metadata repositories being managed by libraries. In order to manage these data sets, libraries are looking for new preservation and discovery…

  3. International Metadata Initiatives: Lessons in Bibliographic Control.

    Science.gov (United States)

    Caplan, Priscilla

    This paper looks at a subset of metadata schemes, including the Text Encoding Initiative (TEI) header, the Encoded Archival Description (EAD), the Dublin Core Metadata Element Set (DCMES), and the Visual Resources Association (VRA) Core Categories for visual resources. It examines why they developed as they did, major point of difference from…

  4. A Metadata-Rich File System

    Energy Technology Data Exchange (ETDEWEB)

    Ames, S; Gokhale, M B; Maltzahn, C

    2009-01-07

    Despite continual improvements in the performance and reliability of large scale file systems, the management of file system metadata has changed little in the past decade. The mismatch between the size and complexity of large scale data stores and their ability to organize and query their metadata has led to a de facto standard in which raw data is stored in traditional file systems, while related, application-specific metadata is stored in relational databases. This separation of data and metadata requires considerable effort to maintain consistency and can result in complex, slow, and inflexible system operation. To address these problems, we have developed the Quasar File System (QFS), a metadata-rich file system in which files, metadata, and file relationships are all first class objects. In contrast to hierarchical file systems and relational databases, QFS defines a graph data model composed of files and their relationships. QFS includes Quasar, an XPATH-extended query language for searching the file system. Results from our QFS prototype show the effectiveness of this approach. Compared to the defacto standard, the QFS prototype shows superior ingest performance and comparable query performance on user metadata-intensive operations and superior performance on normal file metadata operations.

  5. Collection Metadata Solutions for Digital Library Applications

    Science.gov (United States)

    Hill, Linda L.; Janee, Greg; Dolin, Ron; Frew, James; Larsgaard, Mary

    1999-01-01

    Within a digital library, collections may range from an ad hoc set of objects that serve a temporary purpose to established library collections intended to persist through time. The objects in these collections vary widely, from library and data center holdings to pointers to real-world objects, such as geographic places, and the various metadata schemas that describe them. The key to integrated use of such a variety of collections in a digital library is collection metadata that represents the inherent and contextual characteristics of a collection. The Alexandria Digital Library (ADL) Project has designed and implemented collection metadata for several purposes: in XML form, the collection metadata "registers" the collection with the user interface client; in HTML form, it is used for user documentation; eventually, it will be used to describe the collection to network search agents; and it is used for internal collection management, including mapping the object metadata attributes to the common search parameters of the system.

  6. Incorporating ISO Metadata Using HDF Product Designer

    Science.gov (United States)

    Jelenak, Aleksandar; Kozimor, John; Habermann, Ted

    2016-01-01

    The need to store in HDF5 files increasing amounts of metadata of various complexity is greatly overcoming the capabilities of the Earth science metadata conventions currently in use. Data producers until now did not have much choice but to come up with ad hoc solutions to this challenge. Such solutions, in turn, pose a wide range of issues for data managers, distributors, and, ultimately, data users. The HDF Group is experimenting on a novel approach of using ISO 19115 metadata objects as a catch-all container for all the metadata that cannot be fitted into the current Earth science data conventions. This presentation will showcase how the HDF Product Designer software can be utilized to help data producers include various ISO metadata objects in their products.

  7. POSTHARVEST FUNGAL DETERIORATION OF TOMATO ...

    African Journals Online (AJOL)

    Dr A.B.Ahmed

    commercial food vendors often intentionally use physically damaged tomatoes and ... The production of the bulk of the fresh tomato and. 'tatase' in Nigeria is in ...... mycotoxin contamination of food include but not limited to mycotoxicoses, liver ...

  8. Metadata to Support Data Warehouse Evolution

    Science.gov (United States)

    Solodovnikova, Darja

    The focus of this chapter is metadata necessary to support data warehouse evolution. We present the data warehouse framework that is able to track evolution process and adapt data warehouse schemata and data extraction, transformation, and loading (ETL) processes. We discuss the significant part of the framework, the metadata repository that stores information about the data warehouse, logical and physical schemata and their versions. We propose the physical implementation of multiversion data warehouse in a relational DBMS. For each modification of a data warehouse schema, we outline the changes that need to be made to the repository metadata and in the database.

  9. Handbook of metadata, semantics and ontologies

    CERN Document Server

    Sicilia, Miguel-Angel

    2013-01-01

    Metadata research has emerged as a discipline cross-cutting many domains, focused on the provision of distributed descriptions (often called annotations) to Web resources or applications. Such associated descriptions are supposed to serve as a foundation for advanced services in many application areas, including search and location, personalization, federation of repositories and automated delivery of information. Indeed, the Semantic Web is in itself a concrete technological framework for ontology-based metadata. For example, Web-based social networking requires metadata describing people and

  10. Mineral composition of organically grown tomato

    Science.gov (United States)

    Ghambashidze, Giorgi

    2014-05-01

    In recent years, consumer concerns on environmental and health issues related to food products have increased and, as a result, the demand for organically grown production has grown. Results indicate that consumers concerned about healthy diet and environmental degradation are the most likely to buy organic food, and are willing to pay a high premium. Therefore, it is important to ensure the quality of the produce, especially for highly consumed products. The tomato (Lycopersicon esculentum) is one of the most widely consumed fresh vegetables in the world. It is also widely used by the food industries as a raw material for the production of derived products such as purees or ketchup. Consequently, many investigations have addressed the impact of plant nutrition on the quality of tomato fruit. The concentrations of minerals (P, Na, K, Ca and Mg) and trace elements (Cu, Zn and Mn) were determined in tomatoes grown organically in East Georgia, Marneuli District. The contents of minerals and Mn seem to be in the range as shown in literature. Cu and Zn were found in considerably high amounts in comparison to maximum permissible values established in Georgia. Some correlations were observed between the minerals and trace elements studied. K and Mg were strongly correlated with Cu and Zn. Statistically significant difference have shown also P, K and Mg based between period of sampling.

  11. USGS Digital Orthophoto Quad (DOQ) Metadata

    Data.gov (United States)

    Minnesota Department of Natural Resources — Metadata for the USGS DOQ Orthophoto Layer. Each orthophoto is represented by a Quarter 24k Quad tile polygon. The polygon attributes contain the quarter-quad tile...

  12. Structural Metadata Research in the Ears Program

    National Research Council Canada - National Science Library

    Liu, Yang; Shriberg, Elizabeth; Stolcke, Andreas; Peskin, Barbara; Ang, Jeremy; Hillard, Dustin; Ostendorf, Mari; Tomalin, Marcus; Woodland, Phil; Harper, Mary

    2005-01-01

    Both human and automatic processing of speech require recognition of more than just words. In this paper we provide a brief overview of research on structural metadata extraction in the DARPA EARS rich transcription program...

  13. Mining Building Metadata by Data Stream Comparison

    DEFF Research Database (Denmark)

    Holmegaard, Emil; Kjærgaard, Mikkel Baun

    2016-01-01

    to handle data streams with only slightly similar patterns. We have evaluated Metafier with points and data from one building located in Denmark. We have evaluated Metafier with 903 points, and the overall accuracy, with only 3 known examples, was 94.71%. Furthermore we found that using DTW for mining...... ways to annotate sensor and actuation points. This makes it difficult to create intuitive queries for retrieving data streams from points. Another problem is the amount of insufficient or missing metadata. We introduce Metafier, a tool for extracting metadata from comparing data streams. Metafier...... enables a semi-automatic labeling of metadata to building instrumentation. Metafier annotates points with metadata by comparing the data from a set of validated points with unvalidated points. Metafier has three different algorithms to compare points with based on their data. The three algorithms...

  14. FSA 2003-2004 Digital Orthophoto Metadata

    Data.gov (United States)

    Minnesota Department of Natural Resources — Metadata for the 2003-2004 FSA Color Orthophotos Layer. Each orthophoto is represented by a Quarter 24k Quad tile polygon. The polygon attributes contain the...

  15. Optimising metadata workflows in a distributed information environment

    OpenAIRE

    Robertson, R. John; Barton, Jane

    2005-01-01

    The different purposes present within a distributed information environment create the potential for repositories to enhance their metadata by capitalising on the diversity of metadata available for any given object. This paper presents three conceptual reference models required to achieve this optimisation of metadata workflow: the ecology of repositories, the object lifecycle model, and the metadata lifecycle model. It suggests a methodology for developing the metadata lifecycle model, and ...

  16. Science friction: data, metadata, and collaboration.

    Science.gov (United States)

    Edwards, Paul N; Mayernik, Matthew S; Batcheller, Archer L; Bowker, Geoffrey C; Borgman, Christine L

    2011-10-01

    When scientists from two or more disciplines work together on related problems, they often face what we call 'science friction'. As science becomes more data-driven, collaborative, and interdisciplinary, demand increases for interoperability among data, tools, and services. Metadata--usually viewed simply as 'data about data', describing objects such as books, journal articles, or datasets--serve key roles in interoperability. Yet we find that metadata may be a source of friction between scientific collaborators, impeding data sharing. We propose an alternative view of metadata, focusing on its role in an ephemeral process of scientific communication, rather than as an enduring outcome or product. We report examples of highly useful, yet ad hoc, incomplete, loosely structured, and mutable, descriptions of data found in our ethnographic studies of several large projects in the environmental sciences. Based on this evidence, we argue that while metadata products can be powerful resources, usually they must be supplemented with metadata processes. Metadata-as-process suggests the very large role of the ad hoc, the incomplete, and the unfinished in everyday scientific work.

  17. Synthesis of vaterite and aragonite crystals using biomolecules of tomato and capsicum

    Science.gov (United States)

    Chen, Long; Xu, Wang-Hua; Zhao, Ying-Guo; Kang, Yan; Liu, Shao-Hua; Zhang, Zai-Yong

    2012-12-01

    In this paper, biomimetic synthesis of calcium carbonate (CaCO3) in the presence of biomolecules of two vegetables-tomato and capsicum is investigated. Scanning electron microscopy and X-ray powder diffractometry were used to characterize the CaCO3 obtained. The biomolecules in the extracts of two vegetables are determined by UV-vis or FTIR. The results indicate that a mixture of calcite and vaterite spheres constructed from small particles is produced with the extract of tomato, while aragonite rods or ellipsoids are formed in the presence of extract of capsicum. The possible formation mechanism of the CaCO3 crystals with tomato biomolecules can be interpreted by particle-aggregation based non-classical crystallization laws. The proteins and/or other biomolecules in tomato and capsicum may control the formation of vaterite and aragonite crystals by adsorbing onto facets of them.

  18. Distributed metadata servers for cluster file systems using shared low latency persistent key-value metadata store

    Science.gov (United States)

    Bent, John M.; Faibish, Sorin; Pedone, Jr., James M.; Tzelnic, Percy; Ting, Dennis P. J.; Ionkov, Latchesar A.; Grider, Gary

    2017-12-26

    A cluster file system is provided having a plurality of distributed metadata servers with shared access to one or more shared low latency persistent key-value metadata stores. A metadata server comprises an abstract storage interface comprising a software interface module that communicates with at least one shared persistent key-value metadata store providing a key-value interface for persistent storage of key-value metadata. The software interface module provides the key-value metadata to the at least one shared persistent key-value metadata store in a key-value format. The shared persistent key-value metadata store is accessed by a plurality of metadata servers. A metadata request can be processed by a given metadata server independently of other metadata servers in the cluster file system. A distributed metadata storage environment is also disclosed that comprises a plurality of metadata servers having an abstract storage interface to at least one shared persistent key-value metadata store.

  19. Radionuclide accumulation peculiarities demonstrated by vegetable varieties

    International Nuclear Information System (INIS)

    Kruk, A.V.; Goncharenko, G.G.; Kilchevsky, A.V.

    2004-01-01

    This study focused on ecological and genetic aspects of radionuclide accumulation demonstrated by a number of vegetable varieties. The researches resulted in determining the cabbage varieties which were characterised by the minimal level of radionuclide accumulation. It was shown that the above varieties manifested the relation between radionuclide accumulation and morphobiological characteristics such as vegetation period duration and yield criteria. The study specified the genotypes with high ecological stability as regards to radionuclide accumulation: 'Beloruskaya 85' cabbage and 'Dokhodny' tomato showed the best response to Cs 137, while 'Beloruskaya 85', 'Rusinovka', 'Amager 611' cabbage varieties and 'Sprint' tomato showed the minimal level of Sr 90 accumulation. (authors)

  20. Pre-sowing irradiation of vegetable seeds

    Energy Technology Data Exchange (ETDEWEB)

    Stoyanov, S

    1975-01-01

    Results are reported of trials with radiation stimulation of vegetable crops conducted under farm conditions in different regions. They were based on exact tests accomplished at the IGHB. Pre-sowing irradiation of seed increased the greenhouse yield of Extase tomato variety by 15%; it increased the yield of Triumph tomato variety under field conditions as well. The pepper variety Kourtovska Kapiya and eggplant variety Bulgarski 12, both grown from irradiated seed in open field produced 18% and 5.5% higher yields, respectively. Irradiation of vegetable seeds finds a large application in the farm practice.

  1. Pre-sowing irradiation of vegetable seeds

    International Nuclear Information System (INIS)

    Stoyanov, S.

    1975-01-01

    Results are reported of trials with radiation stimulation of vegetable crops conducted under farm conditions in different regions. They were based on exact tests accomplished at the IGHB. Pre-sowing irradiation of seed increased the greenhouse yield of Extase tomato variety by 15%; it increased the yield of Triumph tomato variety under field conditions as well. The pepper variety Kourtovska Kapiya and eggplant variety Bulgarski 12, both grown from irradiated seed in open field produced 18% and 5.5% higher yields, respectively. Irradiation of vegetable seeds finds a large application in the farm practice. (author)

  2. Diversity among Modern Tomato Genotypes at Different Levels in Fresh-Market Breeding

    Directory of Open Access Journals (Sweden)

    Krishna Bhattarai

    2018-01-01

    Full Text Available Cultivated tomato has been in existence for about 400 years and breeding activities have been conducted for only eight decades. However, more than 10,000 tomato cultivars have already been developed. Ninety-one tomato genotypes were characterized for twenty-one morphological traits using developmental, vegetative, and fruit traits. Correlation, principal component, and cluster analysis between the traits were carried out. Higher correlations between fruit traits including fruit shape, fruit size, and fruit types were observed. These correlations indicate that specific fruit types require specific traits like branched inflorescence and a greater number of fruits per inflorescence are beneficial only for smaller fruit sizes like cherry and grape tomatoes. Contrastingly, traits like determinate growth habit and fruit maturity are preferred in all fruit types of tomato for better cultivation practices and longer production duration and hence showed lower correlations. Principal component analysis clustered tomato genotypes into three main clusters with multiple subgroups. Similar tomato genotypes were placed into one or more clusters confirming the results from correlation analysis. Involvement of private breeding programs in cultivar development has increased the competition on introgression of novel and desired traits across new cultivars. Understanding the diversity present in modern cultivars and potential traits identification in related wild species can enhance tomato diversity and improve quality and production.

  3. Contamination of tomatoes with coliforms and Escherichia coli on farms and in markets of northwest Nigeria.

    Science.gov (United States)

    Shenge, Kenneth C; Whong, Clement M Z; Yakubu, Lydia L; Omolehin, Raphael A; Erbaugh, J Mark; Miller, Sally A; LeJeune, Jeffrey T

    2015-01-01

    Although recent reports indicated that produce contamination with foodborne pathogens is widespread in Nigeria, the sources and magnitude of microbial contamination of fruits and vegetables on farms and in markets have not been thoroughly identified. To ascertain possible pathways of contamination, the frequency and magnitude of coliform and Escherichia coli contamination of tomatoes produced in northwest Nigeria was assessed on farms and in markets. Eight hundred twenty-six tomato fruit samples and 36 irrigation water samples were collected and assessed for fecal indicator organisms. In addition, the awareness and use of food safety practices by tomato farmers and marketers were determined. Median concentration of coliforms on all field- and market-sourced tomato fruit samples, as well as in irrigation water sources, in Kaduna, Kano, and Katsina states exceeded 1,000 most probable number (MPN) per g. Median E. coli counts from 73 (17%) of 420 field samples and 231 (57%) of 406 market tomato fruit samples exceeded 100 MPN/g. Median E. coli concentrations on tomato fruits were higher (P market tomato fruit samples (2.66 Log MPN/g) were higher (P marketers were generally unaware of the relationship between food safety practices and microbial contamination on fresh produce. Good agricultural practices pertaining to food safety on farms and in local markets were seldom used. Adoption of food safety practices on-farm, during transport, and during marketing could improve the microbial quality of tomatoes available to the public in this region of the world.

  4. Streamlining geospatial metadata in the Semantic Web

    Science.gov (United States)

    Fugazza, Cristiano; Pepe, Monica; Oggioni, Alessandro; Tagliolato, Paolo; Carrara, Paola

    2016-04-01

    In the geospatial realm, data annotation and discovery rely on a number of ad-hoc formats and protocols. These have been created to enable domain-specific use cases generalized search is not feasible for. Metadata are at the heart of the discovery process and nevertheless they are often neglected or encoded in formats that either are not aimed at efficient retrieval of resources or are plainly outdated. Particularly, the quantum leap represented by the Linked Open Data (LOD) movement did not induce so far a consistent, interlinked baseline in the geospatial domain. In a nutshell, datasets, scientific literature related to them, and ultimately the researchers behind these products are only loosely connected; the corresponding metadata intelligible only to humans, duplicated on different systems, seldom consistently. Instead, our workflow for metadata management envisages i) editing via customizable web- based forms, ii) encoding of records in any XML application profile, iii) translation into RDF (involving the semantic lift of metadata records), and finally iv) storage of the metadata as RDF and back-translation into the original XML format with added semantics-aware features. Phase iii) hinges on relating resource metadata to RDF data structures that represent keywords from code lists and controlled vocabularies, toponyms, researchers, institutes, and virtually any description one can retrieve (or directly publish) in the LOD Cloud. In the context of a distributed Spatial Data Infrastructure (SDI) built on free and open-source software, we detail phases iii) and iv) of our workflow for the semantics-aware management of geospatial metadata.

  5. Introduction of Pseudomonas aeruginosa into a Hospital via Vegetables

    Science.gov (United States)

    Kominos, Spyros D.; Copeland, Charles E.; Grosiak, Barbara; Postic, Bosko

    1972-01-01

    Pseudomonas aeruginosa was isolated from tomatoes, radishes, celery, carrots, endive, cabbage, cucumbers, onions, and lettuce obtained from the kitchen of a general hospital, with tomatoes yielding both highest frequencies of isolation and highest counts. Presence of P. aeruginosa on the hands of kitchen personnel and cutting boards and knives which they used suggests acquisition of the organism through contact with these vegetables. It is estimated that a patient consuming an average portion of tomato salad might ingest as many as 5 × 103 colony-forming units of P. aeruginosa. Pyocine types of P. aeruginosa isolated from clinical specimens were frequently identical to those recovered from vegetables, thus implicating tomatoes and other vegetables as an important source and vehicle by which P. aeruginosa colonizes the intestinal tract of patients. PMID:4628795

  6. Antioxidant and Antiplatelet Activities in Extracts from Green and Fully Ripe Tomato Fruits (Solanum lycopersicum and Pomace from Industrial Tomato Processing

    Directory of Open Access Journals (Sweden)

    Eduardo Fuentes

    2013-01-01

    Full Text Available The consumption of fruits and vegetables is accepted to be one of the strategies to reduce risk factors for these diseases. The aim of this study was to examine potential relationships between the antioxidant and the antiplatelet activities in green mature and fully ripe (red tomatoes and of lycopene-rich byproducts of tomato paste processing such as pomace. The total phenol content of tomato components was the highest in peels, pulp, and in the mucilaginous myxotesta covering the tomato seeds with values 36.9±0.8, 33.3±00.5, and 17.6±0.9 mg GAE/100 g, respectively (P<0.05. Tomato peels had the highest antioxidant activity, both, as measured by the FRAP (46.9±0.9 μmol Fe+2/g, P<0.05 and the DPPH assays (97.4±0.2%, 1000 μg/mL, P<0.05. Pomace extracts showed the highest antiplatelet activity induced by ADP, collagen, TRAP-6, and arachidonic acid. While the maturation stage of the tomato fruit affected the antioxidant effect, antiplatelet activity was independent of fruit ripeness. Finally, based on the present results, tomato and its byproducts may be considered as a valuable source of antioxidant and antiplatelet activities.

  7. Prediction of Solar Eruptions Using Filament Metadata

    Science.gov (United States)

    Aggarwal, Ashna; Schanche, Nicole; Reeves, Katharine K.; Kempton, Dustin; Angryk, Rafal

    2018-05-01

    We perform a statistical analysis of erupting and non-erupting solar filaments to determine the properties related to the eruption potential. In order to perform this study, we correlate filament eruptions documented in the Heliophysics Event Knowledgebase (HEK) with HEK filaments that have been grouped together using a spatiotemporal tracking algorithm. The HEK provides metadata about each filament instance, including values for length, area, tilt, and chirality. We add additional metadata properties such as the distance from the nearest active region and the magnetic field decay index. We compare trends in the metadata from erupting and non-erupting filament tracks to discover which properties present signs of an eruption. We find that a change in filament length over time is the most important factor in discriminating between erupting and non-erupting filament tracks, with erupting tracks being more likely to have decreasing length. We attempt to find an ensemble of predictive filament metadata using a Random Forest Classifier approach, but find the probability of correctly predicting an eruption with the current metadata is only slightly better than chance.

  8. Handling Metadata in a Neurophysiology Laboratory

    Directory of Open Access Journals (Sweden)

    Lyuba Zehl

    2016-07-01

    Full Text Available To date, non-reproducibility of neurophysiological research is a matterof intense discussion in the scientific community. A crucial componentto enhance reproducibility is to comprehensively collect and storemetadata, that is all information about the experiment, the data,and the applied preprocessing steps on the data, such that they canbe accessed and shared in a consistent and simple manner. However,the complexity of experiments, the highly specialized analysis workflowsand a lack of knowledge on how to make use of supporting softwaretools often overburden researchers to perform such a detailed documentation.For this reason, the collected metadata are often incomplete, incomprehensiblefor outsiders or ambiguous. Based on our research experience in dealingwith diverse datasets, we here provide conceptual and technical guidanceto overcome the challenges associated with the collection, organization,and storage of metadata in a neurophysiology laboratory. Through theconcrete example of managing the metadata of a complex experimentthat yields multi-channel recordings from monkeys performing a behavioralmotor task, we practically demonstrate the implementation of theseapproaches and solutions with the intention that they may be generalizedto a specific project at hand. Moreover, we detail five use casesthat demonstrate the resulting benefits of constructing a well-organizedmetadata collection when processing or analyzing the recorded data,in particular when these are shared between laboratories in a modernscientific collaboration. Finally, we suggest an adaptable workflowto accumulate, structure and store metadata from different sourcesusing, by way of example, the odML metadata framework.

  9. Metadata aided run selection at ATLAS

    International Nuclear Information System (INIS)

    Buckingham, R M; Gallas, E J; Tseng, J C-L; Viegas, F; Vinek, E

    2011-01-01

    Management of the large volume of data collected by any large scale scientific experiment requires the collection of coherent metadata quantities, which can be used by reconstruction or analysis programs and/or user interfaces, to pinpoint collections of data needed for specific purposes. In the ATLAS experiment at the LHC, we have collected metadata from systems storing non-event-wise data (Conditions) into a relational database. The Conditions metadata (COMA) database tables not only contain conditions known at the time of event recording, but also allow for the addition of conditions data collected as a result of later analysis of the data (such as improved measurements of beam conditions or assessments of data quality). A new web based interface called 'runBrowser' makes these Conditions Metadata available as a Run based selection service. runBrowser, based on PHP and JavaScript, uses jQuery to present selection criteria and report results. It not only facilitates data selection by conditions attributes, but also gives the user information at each stage about the relationship between the conditions chosen and the remaining conditions criteria available. When a set of COMA selections are complete, runBrowser produces a human readable report as well as an XML file in a standardized ATLAS format. This XML can be saved for later use or refinement in a future runBrowser session, shared with physics/detector groups, or used as input to ELSSI (event level Metadata browser) or other ATLAS run or event processing services.

  10. Geospatial metadata retrieval from web services

    Directory of Open Access Journals (Sweden)

    Ivanildo Barbosa

    Full Text Available Nowadays, producers of geospatial data in either raster or vector formats are able to make them available on the World Wide Web by deploying web services that enable users to access and query on those contents even without specific software for geoprocessing. Several providers around the world have deployed instances of WMS (Web Map Service, WFS (Web Feature Service and WCS (Web Coverage Service, all of them specified by the Open Geospatial Consortium (OGC. In consequence, metadata about the available contents can be retrieved to be compared with similar offline datasets from other sources. This paper presents a brief summary and describes the matching process between the specifications for OGC web services (WMS, WFS and WCS and the specifications for metadata required by the ISO 19115 - adopted as reference for several national metadata profiles, including the Brazilian one. This process focuses on retrieving metadata about the identification and data quality packages as well as indicates the directions to retrieve metadata related to other packages. Therefore, users are able to assess whether the provided contents fit to their purposes.

  11. A Decision Support System (GesCoN for Managing Fertigation in Vegetable Crops. Part II – Model calibration and validation under different environmental growing conditions on field grown tomato

    Directory of Open Access Journals (Sweden)

    Giulia eConversa

    2015-07-01

    Full Text Available The GesCoN model was evaluated for its capability to simulate growth, nitrogen uptake and productivity of open field tomato grown under different environmental and cultural conditions. Five datasets collected from experimental trials carried out in Foggia (IT were used for calibration and 13 datasets collected from trials conducted in Foggia, Perugia (IT and Florida (USA were used for validation. The goodness of fitting was performed by comparing the observed and simulated shoot dry weight (SDW and N crop uptake during crop seasons, total dry weight (TDW, N uptake and fresh yield (TFY. In SDW model calibration, the relative RMSE values fell within the good 10 to 15% range, percent BIAS (PBIAS ranged between -11.5% and 7.4%. The Nash-Sutcliffe efficiency (NSE was very close to the optimal value 1. In the N uptake calibration RRMSE and PBIAS were very low(7%, and -1.78, respectively and NSE close to 1. The validation of SDW (RRMSE=16.7%; NSE=0.96 and N uptake (RRMSE=16.8%; NSE=0.96 showed the good accuracy of GesCoN. A model under- or overestimation of the SDW and N uptake occurred when higher or a lower N rates and/or a more or less efficient system were used compared to the calibration trial. The in-season adjustment, using the SDWcheck procedure, greatly improved model simulations both in the calibration and in the validation phases. The TFY prediction was quite good except in Florida, where a large overestimation (+16% was linked to a different harvest index (0.53 compared the cultivars used for model calibration and validation in Italian areas. The soil water content at the 10-30 cm depth appears to be well simulated by the software, and the GesCoN proved to be able to adaptively control potential yield and DW accumulation under limited N soil availability scenarios and consequently to modify fertilizer application. The DSSwell simulate SDW accumulation and N uptake of different tomato genotypes grown under Mediterranean and subtropical

  12. Building a Disciplinary Metadata Standards Directory

    Directory of Open Access Journals (Sweden)

    Alexander Ball

    2014-07-01

    Full Text Available The Research Data Alliance (RDA Metadata Standards Directory Working Group (MSDWG is building a directory of descriptive, discipline-specific metadata standards. The purpose of the directory is to promote the discovery, access and use of such standards, thereby improving the state of research data interoperability and reducing duplicative standards development work.This work builds upon the UK Digital Curation Centre's Disciplinary Metadata Catalogue, a resource created with much the same aim in mind. The first stage of the MSDWG's work was to update and extend the information contained in the catalogue. In the current, second stage, a new platform is being developed in order to extend the functionality of the directory beyond that of the catalogue, and to make it easier to maintain and sustain. Future work will include making the directory more amenable to use by automated tools.

  13. Metadata and Ontologies in Learning Resources Design

    Science.gov (United States)

    Vidal C., Christian; Segura Navarrete, Alejandra; Menéndez D., Víctor; Zapata Gonzalez, Alfredo; Prieto M., Manuel

    Resource design and development requires knowledge about educational goals, instructional context and information about learner's characteristics among other. An important information source about this knowledge are metadata. However, metadata by themselves do not foresee all necessary information related to resource design. Here we argue the need to use different data and knowledge models to improve understanding the complex processes related to e-learning resources and their management. This paper presents the use of semantic web technologies, as ontologies, supporting the search and selection of resources used in design. Classification is done, based on instructional criteria derived from a knowledge acquisition process, using information provided by IEEE-LOM metadata standard. The knowledge obtained is represented in an ontology using OWL and SWRL. In this work we give evidence of the implementation of a Learning Object Classifier based on ontology. We demonstrate that the use of ontologies can support the design activities in e-learning.

  14. Transgenic tomato hybrids resistant to tomato spotted wilt virus infection.

    NARCIS (Netherlands)

    Haan, de P.; Ultzen, T.; Prins, M.; Gielen, J.; Goldbach, R.; Grinsven, van M.

    1996-01-01

    Tomato spotted wilt virus (TSWV) infections cause significant economic losses in the commercial culture of tomato (Lycopersicon esculentum). Culture practices have only been marginally effective in controlling TSWV. The ultimate way to minimize losses caused by TSWV is resistant varieties. These can

  15. Optimization of productivity and quality of irrigated tomato (Solanum lycopersicum L.) by smallholder farmers in the Central Rift Valley area of Oromia, Ethiopia

    NARCIS (Netherlands)

    Gemechis, Ambecha O.

    2017-01-01

    Tomato (Solanum lycopersicum L.) is a vegetable crop with high potential to contribute to poverty reduction via increased income and food security. It is widely grown by smallholders, has high productivity and its demand is increasing. Ethiopia produced about 30,700 Mg of tomatoes on

  16. 21 CFR 73.585 - Tomato lycopene extract; tomato lycopene concentrate.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 1 2010-04-01 2010-04-01 false Tomato lycopene extract; tomato lycopene... SERVICES GENERAL LISTING OF COLOR ADDITIVES EXEMPT FROM CERTIFICATION Foods § 73.585 Tomato lycopene extract; tomato lycopene concentrate. (a) Identity. (1) The color additive tomato lycopene extract is a...

  17. INFLUENCE OF BIOLOGICALLY ACTIVE SUBSTANCES ON TOMATO YIELD AND QUALITY

    OpenAIRE

    G. I. Yarovoy; V. I. Kuzmenko

    2017-01-01

    The study of influence of growth regulators and biopreparations affecting on decrease of disease development, increase of yield capacity and final product quality was carried out in tomato. It was shown that all preparations were effective in decreasing the process of diseases development and increasing the yield capacity and product quality. The studies were carried out in the experimental fields at the Institute of Vegetables and Melons NAAS, in Ukraine in 2011-2012. The field studies were ...

  18. Pembuatan Aplikasi Metadata Generator untuk Koleksi Peninggalan Warisan Budaya

    Directory of Open Access Journals (Sweden)

    Wimba Agra Wicesa

    2017-03-01

    Full Text Available Warisan budaya merupakan suatu aset penting yang digunakan sebagai sumber informasi dalam mempelajari ilmu sejarah. Mengelola data warisan budaya menjadi suatu hal yang harus diperhatikan guna menjaga keutuhan data warisan budaya di masa depan. Menciptakan sebuah metadata warisan budaya merupakan salah satu langkah yang dapat diambil untuk menjaga nilai dari sebuah artefak. Dengan menggunakan konsep metadata, informasi dari setiap objek warisan budaya tersebut menjadi mudah untuk dibaca, dikelola, maupun dicari kembali meskipun telah tersimpan lama. Selain itu dengan menggunakan konsep metadata, informasi tentang warisan budaya dapat digunakan oleh banyak sistem. Metadata warisan budaya merupakan metadata yang cukup besar. Sehingga untuk membangun metada warisan budaya dibutuhkan waktu yang cukup lama. Selain itu kesalahan (human error juga dapat menghambat proses pembangunan metadata warisan budaya. Proses pembangkitan metadata warisan budaya melalui Aplikasi Metadata Generator menjadi lebih cepat dan mudah karena dilakukan secara otomatis oleh sistem. Aplikasi ini juga dapat menekan human error sehingga proses pembangkitan menjadi lebih efisien.

  19. EPA Metadata Style Guide Keywords and EPA Organization Names

    Science.gov (United States)

    The following keywords and EPA organization names listed below, along with EPA’s Metadata Style Guide, are intended to provide suggestions and guidance to assist with the standardization of metadata records.

  20. Creating metadata that work for digital libraries and Google

    OpenAIRE

    Dawson, Alan

    2004-01-01

    For many years metadata has been recognised as a significant component of the digital information environment. Substantial work has gone into creating complex metadata schemes for describing digital content. Yet increasingly Web search engines, and Google in particular, are the primary means of discovering and selecting digital resources, although they make little use of metadata. This article considers how digital libraries can gain more value from their metadata by adapting it for Google us...

  1. A research related with tomato, carotenoids and factors effecting them

    Directory of Open Access Journals (Sweden)

    Kenan SÖNMEZ

    2014-12-01

    Full Text Available Due to rapid increase of human population, the requirement for foodstuff also increases and new species with high yield are tried to be regenerated in order to fulfill this increasing demand. Apart from the regeneration studies aiming to increase efficiency, increase in demand of healthy, natural nutrition, additive free and higher quality products increase the regeneration studies in this field. Environmental pollution, urban living conditions and high amount of prepared foodstuffs, increased the interest of people towards natural and nutritive foodstuff in recent years. Today, fruits and vegetables are consumed not only for nutrition purpose but also in order to prevent from diseases and considering their therapeutic properties. Therefore fruits and vegetables are preferred due to their content. Functional foodstuff term entered our life as a result of these developments. Almost all of vegetables have protective and therapeutic effects on human health due to the materials in their content. Tomato is one of them. It is widely consumed as fresh in our country just like in other parts of the world as well as in sauce, ketchup and tomato paste forms. Finding high quality tomato in every season has become a normal standard for Turkey.

  2. Thermal inactivation kinetics of Bacillus coagulans spores in tomato juice.

    Science.gov (United States)

    Peng, Jing; Mah, Jae-Hyung; Somavat, Romel; Mohamed, Hussein; Sastry, Sudhir; Tang, Juming

    2012-07-01

    The thermal characteristics of the spores and vegetative cells of three strains of Bacillus coagulans (ATCC 8038, ATCC 7050, and 185A) in tomato juice were evaluated. B. coagulans ATCC 8038 was chosen as the target microorganism for thermal processing of tomato products due to its spores having the highest thermal resistance among the three strains. The thermal inactivation kinetics of B. coagulans ATCC 8038 spores in tomato juice between 95 and 115°C were determined independently in two different laboratories using two different heating setups. The results obtained from both laboratories were in general agreement, with z-values (z-value is defined as the change in temperature required for a 10-fold reduction of the D-value, which is defined as the time required at a certain temperature for a 1-log reduction of the target microorganisms) of 8.3 and 8.7°C, respectively. The z-value of B. coagulans 185A spores in tomato juice (pH 4.3) was found to be 10.2°C. The influence of environmental factors, including cold storage time, pH, and preconditioning, upon the thermal resistance of these bacterial spores is discussed. The results obtained showed that a storage temperature of 4°C was appropriate for maintaining the viability and thermal resistance of B. coagulans ATCC 8038 spores. Acidifying the pH of tomato juice decreased the thermal resistance of these spores. A 1-h exposure at room temperature was considered optimal for preconditioning B. coagulans ATCC 8038 spores in tomato juice.

  3. Handling multiple metadata streams regarding digital learning material

    NARCIS (Netherlands)

    Roes, J.B.M.; Vuuren, J. van; Verbeij, N.; Nijstad, H.

    2010-01-01

    This paper presents the outcome of a study performed in the Netherlands on handling multiple metadata streams regarding digital learning material. The paper describes the present metadata architecture in the Netherlands, the present suppliers and users of metadata and digital learning materials. It

  4. From CLARIN Component Metadata to Linked Open Data

    NARCIS (Netherlands)

    Durco, M.; Windhouwer, Menzo

    2014-01-01

    In the European CLARIN infrastructure a growing number of resources are described with Component Metadata. In this paper we describe a transformation to make this metadata available as linked data. After this first step it becomes possible to connect the CLARIN Component Metadata with other valuable

  5. Greenhouse gas emissions in the life-cycle of carrots and tomatoes. Methods, data and results from a study of the types and amounts of carrots and tomatoes consumed in Sweden. With arable land use

    Energy Technology Data Exchange (ETDEWEB)

    Carlsson Kanyama, Annika

    1997-03-01

    Methods, data and results from an assessment of the arable land use and some greenhouse gas emissions during part of the life-cycle of the consumed carrots and tomatoes in Sweden during 1992-1993 are presented in the report. The life-cycle was delineated to transportation, storage, farm production and production of fertilizers. Carrots from six countries and tomatoes from four countries were analyzed. The study is reported with full transparency. The results are presented as the use of arable land (in m{sup 2}) and as the amount of greenhouse gas emissions (in g CO{sub 2} equivalents) required to sustain current Swedish consumption patterns of carrots and tomatoes. Emissions per kg of consumed tomato were 10 times higher than for carrots. Emissions from carrots were lowest when they were produced within or close to Sweden, while the opposite was the case for tomatoes. The key issues in the life-cycle of the analyzed carrots and tomatoes are identified and discussed. The general conclusions are that storage may be a key issue for vegetables with a long durability and adapted to a northern European climate. For vegetables with short durability, the key issue may be transportation if they are not adapted to a northern European climate but still cultivated in the open. The key issue for vegetables with a short durability may be energy requirements during farm production if the vegetables are not adapted to a northern European climate and therefore cultivated under glass. 3 figs, 57 tabs

  6. Optimization of lamp spectrum for vegetable growth

    Energy Technology Data Exchange (ETDEWEB)

    Prikupets, L.B.; Tikhomirov, A.A. [Institute of Biophysics, Krasnoyarsk (Russian Federation)

    1994-12-31

    Commmercial light sources were evaluated as to the optimum conditions for the production of tomatoes and cucumbers. Data is presented which corresponds to the maximum productivity and optimal spectral ratios. It is suggested that the commercial light sources evaluated were not efficient for the growing of the vegetables.

  7. Metadata Exporter for Scientific Photography Management

    Science.gov (United States)

    Staudigel, D.; English, B.; Delaney, R.; Staudigel, H.; Koppers, A.; Hart, S.

    2005-12-01

    Photographs have become an increasingly important medium, especially with the advent of digital cameras. It has become inexpensive to take photographs and quickly post them on a website. However informative photos may be, they still need to be displayed in a convenient way, and be cataloged in such a manner that makes them easily locatable. Managing the great number of photographs that digital cameras allow and creating a format for efficient dissemination of the information related to the photos is a tedious task. Products such as Apple's iPhoto have greatly eased the task of managing photographs, However, they often have limitations. Un-customizable metadata fields and poor metadata extraction tools limit their scientific usefulness. A solution to this persistent problem is a customizable metadata exporter. On the ALIA expedition, we successfully managed the thousands of digital photos we took. We did this with iPhoto and a version of the exporter that is now available to the public under the name "CustomHTMLExport" (http://www.versiontracker.com/dyn/moreinfo/macosx/27777), currently undergoing formal beta testing This software allows the use of customized metadata fields (including description, time, date, GPS data, etc.), which is exported along with the photo. It can also produce webpages with this data straight from iPhoto, in a much more flexible way than is already allowed. With this tool it becomes very easy to manage and distribute scientific photos.

  8. Metadata Aided Run Selection at ATLAS

    CERN Document Server

    Buckingham, RM; The ATLAS collaboration; Tseng, JC-L; Viegas, F; Vinek, E

    2010-01-01

    Management of the large volume of data collected by any large scale sci- entific experiment requires the collection of coherent metadata quantities, which can be used by reconstruction or analysis programs and/or user in- terfaces, to pinpoint collections of data needed for specific purposes. In the ATLAS experiment at the LHC, we have collected metadata from systems storing non-event-wise data (Conditions) into a relational database. The Conditions metadata (COMA) database tables not only contain conditions known at the time of event recording, but also allow for the addition of conditions data collected as a result of later analysis of the data (such as improved measurements of beam conditions or assessments of data quality). A new web based interface called “runBrowser” makes these Conditions Metadata available as a Run based selection service. runBrowser, based on php and javascript, uses jQuery to present selection criteria and report results. It not only facilitates data selection by conditions at...

  9. Metadata aided run selection at ATLAS

    CERN Document Server

    Buckingham, RM; The ATLAS collaboration; Tseng, JC-L; Viegas, F; Vinek, E

    2011-01-01

    Management of the large volume of data collected by any large scale scientific experiment requires the collection of coherent metadata quantities, which can be used by reconstruction or analysis programs and/or user interfaces, to pinpoint collections of data needed for specific purposes. In the ATLAS experiment at the LHC, we have collected metadata from systems storing non-event-wise data (Conditions) into a relational database. The Conditions metadata (COMA) database tables not only contain conditions known at the time of event recording, but also allow for the addition of conditions data collected as a result of later analysis of the data (such as improved measurements of beam conditions or assessments of data quality). A new web based interface called “runBrowser” makes these Conditions Metadata available as a Run based selection service. runBrowser, based on php and javascript, uses jQuery to present selection criteria and report results. It not only facilitates data selection by conditions attrib...

  10. Viewing and Editing Earth Science Metadata MOBE: Metadata Object Browser and Editor in Java

    Science.gov (United States)

    Chase, A.; Helly, J.

    2002-12-01

    Metadata is an important, yet often neglected aspect of successful archival efforts. However, to generate robust, useful metadata is often a time consuming and tedious task. We have been approaching this problem from two directions: first by automating metadata creation, pulling from known sources of data, and in addition, what this (paper/poster?) details, developing friendly software for human interaction with the metadata. MOBE and COBE(Metadata Object Browser and Editor, and Canonical Object Browser and Editor respectively), are Java applications for editing and viewing metadata and digital objects. MOBE has already been designed and deployed, currently being integrated into other areas of the SIOExplorer project. COBE is in the design and development stage, being created with the same considerations in mind as those for MOBE. Metadata creation, viewing, data object creation, and data object viewing, when taken on a small scale are all relatively simple tasks. Computer science however, has an infamous reputation for transforming the simple into complex. As a system scales upwards to become more robust, new features arise and additional functionality is added to the software being written to manage the system. The software that emerges from such an evolution, though powerful, is often complex and difficult to use. With MOBE the focus is on a tool that does a small number of tasks very well. The result has been an application that enables users to manipulate metadata in an intuitive and effective way. This allows for a tool that serves its purpose without introducing additional cognitive load onto the user, an end goal we continue to pursue.

  11. Effect of a Bacterial Grass Culture on the Plant Growth and Disease Control in Tomato

    Directory of Open Access Journals (Sweden)

    Yong Seong Lee

    2017-12-01

    Full Text Available This study aimed to investigate the plant growth-promoting and biocontrol potential of a grass culture with Paenibacillus ehimensis KWN8 on tomato. For this experiment, treatments of a chemical fertilizer (F, a bacterial grass culture (G, a 1/3 volume of G plus 2/3 F (GF, and F plus a synthetic fungicide (FSf were applied to tomato leaves and roots. The result showed that the severity of Alternariasolani and Botrytiscinerea symptoms were significantly reduced after the application of the bacterial grass culture (G and GF and FSf. In addition, root mortality in G and GF was lower compared to F. Tomato plants treated with G or GF had better vegetative growth and yield compared to F. Application of G affected the fungal and bacterial populations in the soil. In conclusion, treatment with a bacterial grass culture decreased disease severity and increased tomato growth parameters. However, there were no statistically significant correlations between disease occurrence and tomato yields. This experiment presents the possibility to manage diseases of tomato in an environmentally friendly manner and to also increase the yield of tomato by using a grass culture broth containing P. ehimensis KWN38.

  12. Metadata Effectiveness in Internet Discovery: An Analysis of Digital Collection Metadata Elements and Internet Search Engine Keywords

    Science.gov (United States)

    Yang, Le

    2016-01-01

    This study analyzed digital item metadata and keywords from Internet search engines to learn what metadata elements actually facilitate discovery of digital collections through Internet keyword searching and how significantly each metadata element affects the discovery of items in a digital repository. The study found that keywords from Internet…

  13. Metadata Authoring with Versatility and Extensibility

    Science.gov (United States)

    Pollack, Janine; Olsen, Lola

    2004-01-01

    NASA's Global Change Master Directory (GCMD) assists the scientific community in the discovery of and linkage to Earth science data sets and related services. The GCMD holds over 13,800 data set descriptions in Directory Interchange Format (DIF) and 700 data service descriptions in Service Entry Resource Format (SERF), encompassing the disciplines of geology, hydrology, oceanography, meteorology, and ecology. Data descriptions also contain geographic coverage information and direct links to the data, thus allowing researchers to discover data pertaining to a geographic location of interest, then quickly acquire those data. The GCMD strives to be the preferred data locator for world-wide directory-level metadata. In this vein, scientists and data providers must have access to intuitive and efficient metadata authoring tools. Existing GCMD tools are attracting widespread usage; however, a need for tools that are portable, customizable and versatile still exists. With tool usage directly influencing metadata population, it has become apparent that new tools are needed to fill these voids. As a result, the GCMD has released a new authoring tool allowing for both web-based and stand-alone authoring of descriptions. Furthermore, this tool incorporates the ability to plug-and-play the metadata format of choice, offering users options of DIF, SERF, FGDC, ISO or any other defined standard. Allowing data holders to work with their preferred format, as well as an option of a stand-alone application or web-based environment, docBUlLDER will assist the scientific community in efficiently creating quality data and services metadata.

  14. COMPATIBILITY AND FEASIBILITY OF GRAFT TOMATO CULTIVAR SANTA CRUZ KADA IN DIFFERENT ROOTSTOCKS

    Directory of Open Access Journals (Sweden)

    A. R. Zeist

    2015-02-01

    Full Text Available Tomato production through the technique of grafting aims to control soil pathogens, induce flowering, and improve tolerance to waterlogging, salinity and alkalinity of the soil. For this work were performed 50 grafts for each type of rootstock, totaling 100 slips and 50 seedlings kept as control. After 15 days of grafting, the seedlings were evaluated on the percentage of picks grafting. The treatment which used the tomato cultivar Cherry Red® as rootstock presented results of vegetative growth (height and volume Cup higher than other treatments. However after transplanting, defective development was observed for plants with grafting when compared to the controls. After 35 days of follow up, there was a low survival rate, being 5% of the plants. According to the results obtained in this work the tomato cultivar Santa Cruz Kada® has good compatibility with the rootstock cultivar Cayenne® pepper and tomato cultivar Cherry Red®

  15. Compost amendment of sandy soil affects soil properties and greenhouse tomato productivity

    DEFF Research Database (Denmark)

    Arthur, Emmanuel; Cornelis, W.; Razzaghi, Fatemeh

    2012-01-01

    Sandy soils, with low productivity, could be improved by compost application to sustain crop production. This study aimed to examine the effect of three compost types (vegetable, fruit and yard waste compost, garden waste compost, and spent mushroom compost) on basic properties of a loamy sand...... compost had greater effect in improving tomato productivity. A decade-long application of composts on loamy sand improved basic chemical and physical properties which were reflected in increased fruit yield in tomato. Since no negative effect of compost was observed, we suggest that sandy soils may serve...... and greenhouse tomato productivity. Disturbed and intact soil samples were taken from a decade-long compost field experiment on loamy sand with three compost types at application rate of 30 m3 ha-1 yr-1 (7.5 ton ha-1 yr-1). The soils were characterized for chemical and physical properties. Tomato was planted...

  16. Overexpressing CAPRICE and GLABRA3 did not change the anthocyanin content of tomato (Solanum lycopersicum) fruit peel.

    Science.gov (United States)

    Wada, Takuji; Onishi, Mio; Kunihiro, Asuka; Tominaga-Wada, Rumi

    2015-01-01

    In Arabidopsis thaliana, the R3-type MYB transcription factor CAPRICE (CPC) and bHLH transcription factor GLABRA3 (GL3) cooperatively regulate epidermal cell differentiation. CPC and GL3 are involved in root-hair differentiation, trichome initiation and anthocyanin biosynthesis in Arabidopsis epidermal cells. Previously, we showed that CPC and GL3 also influence anthocyanin accumulation in tomato. Introduction of 35S::CPC into tomato significantly inhibits anthocyanin accumulation in cotyledons, leaves and stems. In contrast, introduction of GL3::GL3 strongly enhances anthocyanin accumulation in cotyledons, leaves and stems of tomato. In this study, we investigated the effect of CPC and GL3 on anthocyanin accumulation in the epidermis of tomato fruit. Unlike the results with vegetative tissues, overexpression of CPC and GL3 did not influence anthocyanin biosynthesis in tomato fruit peel.

  17. Multi-facetted Metadata - Describing datasets with different metadata schemas at the same time

    Science.gov (United States)

    Ulbricht, Damian; Klump, Jens; Bertelmann, Roland

    2013-04-01

    Inspired by the wish to re-use research data a lot of work is done to bring data systems of the earth sciences together. Discovery metadata is disseminated to data portals to allow building of customized indexes of catalogued dataset items. Data that were once acquired in the context of a scientific project are open for reappraisal and can now be used by scientists that were not part of the original research team. To make data re-use easier, measurement methods and measurement parameters must be documented in an application metadata schema and described in a written publication. Linking datasets to publications - as DataCite [1] does - requires again a specific metadata schema and every new use context of the measured data may require yet another metadata schema sharing only a subset of information with the meta information already present. To cope with the problem of metadata schema diversity in our common data repository at GFZ Potsdam we established a solution to store file-based research data and describe these with an arbitrary number of metadata schemas. Core component of the data repository is an eSciDoc infrastructure that provides versioned container objects, called eSciDoc [2] "items". The eSciDoc content model allows assigning files to "items" and adding any number of metadata records to these "items". The eSciDoc items can be submitted, revised, and finally published, which makes the data and metadata available through the internet worldwide. GFZ Potsdam uses eSciDoc to support its scientific publishing workflow, including mechanisms for data review in peer review processes by providing temporary web links for external reviewers that do not have credentials to access the data. Based on the eSciDoc API, panMetaDocs [3] provides a web portal for data management in research projects. PanMetaDocs, which is based on panMetaWorks [4], is a PHP based web application that allows to describe data with any XML-based schema. It uses the eSciDoc infrastructures

  18. PRODUCTION OF TOMATO SEEDLINGS UNDER SALINE IRRIGATION

    Directory of Open Access Journals (Sweden)

    Carlos Alberto Brasiliano Campos

    2007-01-01

    Full Text Available Processing tomato is the most important vegetable crop of the Brazilian agribusiness and few researches have been conducted to evaluate the tolerance of this crop to saline stress. In this study, the effects of five levels of salinity of the irrigation water (1, 2, 3, 4 and 5 dS m-1 and three equivalent proportions of Na:Ca:Mg (1:1:0.5, 4:1:0.5 and 7:1:0.5 were tested on the emergence and vigor of processing tomato, cultivar IPA 6. Seeds were sowed in expanded polystyrene tray (128 cells and each tray received 1 L of water after sowing. The trays were piled and, four days after sowing, they were placed on suspended supports in a greenhouse. Irrigation was accomplished daily from the fifth day after sowing. Only dry weight of shoot and root was affected by sodium proportions, while linear reductions of the speed of emergence, stem length and the dry weight of shoot and root were observed with increasing salinity. Root was more affected than shoot by salinity and relative growth ratioincreased with salinity levels on the 14-21 days after sowing period, indicating that the crop showed a certain increase of salinity tolerance with the time of exposure to salts.

  19. Organic fertilization in cherry tomato plants

    Directory of Open Access Journals (Sweden)

    Janini Tatiane Lima Souza Maia

    2013-03-01

    Full Text Available Cherry tomato (Solanum lycopersicum is highly demanding with regard to mineral nutrients. The use of animal manure shows to be an efficient and sustainable fertilization way for this crop. This study aimed to evaluate the effect of different doses of cattle manure in the vegetative and reproductive growth of cherry tomato. The experiment was conducted in a greenhouse at the Plant Science Department of Universidade Federal de Vicosa, using a completely randomized experimental design with 5 treatments and 4 replications, besides 1 control treatment using chemical fertilizer as a source of NPK. After 45 days from the beginning of the experiment, the number of leaves, flowers, and fruits, the dry mass of leaves, stem, flowers, fruits, and roots, the stem length, and the root volume were evaluated. The nutrient content in leaves, stem, and roots was also evaluated. Plants grown with chemical fertilizer obtained a lower average for all phytotechnical variables analyzed. The number of leaves and fruits, and the production of dry matter of leaves, fruits, and stems showed an upward linear response with an increase in manure doses. The Ca, Mg, and S leaf contents were higher in the treatment with chemical fertilization.

  20. Responses of grafted tomato (Solanum lycopersiocon L. to abiotic stresses in Saudi Arabia

    Directory of Open Access Journals (Sweden)

    Abdulaziz Al-Harbi

    2017-09-01

    Full Text Available Quantity and quality of irrigation water are considered the most imperative limiting factors for plant production in arid environment. Adoptions of strategies can minimize crop water consumption while nonexistent yield reduction is considered challenge for scholars especially in arid environment. Grafting is regarded as a promising tool to avoid or reduce yield loss caused by abiotic stresses. Tomato (Solanum lycopersium Mill., commercial cultivar Faridah was grafted on Unifort rootstock and grown under regulated deficit irrigation (RDI (100%, 80% and 60% ETc, using two types of irrigation water, fresh (EC = 0.86 dS/m and brackish (EC = 3.52 dS/m. The effects of grafting and RDI on water use efficiency, vegetative growth, yield, fruit quality were investigated. Plant vegetative growth was reduced under water and salinity stresses. Grafting the plant significantly improves the vegetative growth under both conditions. The results showed that crop yield, Ca+2 and K+ were considerably increased in grafted tomato compared to non-grafted plants under water and salinity stresses. Grafted tomato plants accumulated less Na+ and Cl−, especially under high levels of salinity compared to non-grafted plants. Grafting tomato plants showed a slight decrease on the fruit quality traits such as vitamin C, titratable acidity (TA and total soluble solids (TSS. This study confirmed that grafted tomato plants can mitigate undesirable impact of salt stress on growth and fruit quality.

  1. Making Interoperability Easier with the NASA Metadata Management Tool

    Science.gov (United States)

    Shum, D.; Reese, M.; Pilone, D.; Mitchell, A. E.

    2016-12-01

    ISO 19115 has enabled interoperability amongst tools, yet many users find it hard to build ISO metadata for their collections because it can be large and overly flexible for their needs. The Metadata Management Tool (MMT), part of NASA's Earth Observing System Data and Information System (EOSDIS), offers users a modern, easy to use browser based tool to develop ISO compliant metadata. Through a simplified UI experience, metadata curators can create and edit collections without any understanding of the complex ISO-19115 format, while still generating compliant metadata. The MMT is also able to assess the completeness of collection level metadata by evaluating it against a variety of metadata standards. The tool provides users with clear guidance as to how to change their metadata in order to improve their quality and compliance. It is based on NASA's Unified Metadata Model for Collections (UMM-C) which is a simpler metadata model which can be cleanly mapped to ISO 19115. This allows metadata authors and curators to meet ISO compliance requirements faster and more accurately. The MMT and UMM-C have been developed in an agile fashion, with recurring end user tests and reviews to continually refine the tool, the model and the ISO mappings. This process is allowing for continual improvement and evolution to meet the community's needs.

  2. Efficient processing of MPEG-21 metadata in the binary domain

    Science.gov (United States)

    Timmerer, Christian; Frank, Thomas; Hellwagner, Hermann; Heuer, Jörg; Hutter, Andreas

    2005-10-01

    XML-based metadata is widely adopted across the different communities and plenty of commercial and open source tools for processing and transforming are available on the market. However, all of these tools have one thing in common: they operate on plain text encoded metadata which may become a burden in constrained and streaming environments, i.e., when metadata needs to be processed together with multimedia content on the fly. In this paper we present an efficient approach for transforming such kind of metadata which are encoded using MPEG's Binary Format for Metadata (BiM) without additional en-/decoding overheads, i.e., within the binary domain. Therefore, we have developed an event-based push parser for BiM encoded metadata which transforms the metadata by a limited set of processing instructions - based on traditional XML transformation techniques - operating on bit patterns instead of cost-intensive string comparisons.

  3. Changes in oxidative stress in transgenic RNAi ACO1 tomato fruit during ripening

    Science.gov (United States)

    Eglous, Najat Mohamed; Ali, Zainon Mohd; Hassan, Maizom; Zainal, Zamri

    2013-11-01

    Tomato (Solanum Lycopersicum L.) is the second most cultivated vegetable in the world and widely used as a system for studying the role of ethylene during fruit ripening. Our objective was to study the oxidative stress and antioxidative metabolism during ripening of non transgenic tomato and transgenic line-21 tomato which reduced ethylene. The line-21 of transgenic tomato plants (RNAi ACO1) had lower ethylene production and longer shelf-life more than 32 days as compared to the wild-type fruits which have very short shelf-life. In this study, tomato fruit were divided into five different stages (MG: mature green 5%, B: breaker 25%, T: turning 50%, O: orange75%, RR: red ripe100%). The activity of lipoxygenase (LOX) and lipid peroxidation (MDA) were measured to assess changes in oxidative stress. The LOX activity and MDA content decreased significantly obtaining 2.6-fold and 1.2-fold, respectively, as compared to the wild type fruit. However, superoxide dismutase (SOD) and catalase (CAT) activities were increased to 1.9 and 1.2 folds from the mature green to the fully ripe stage in transgenic tomatoes. Furthermore, the wild type tomato increases 1.3 in SOD and 1.6 in CAT activities. The overall results indicate that the wild type tomato fruit showed a faster rate of ripening, parallel to decline in the rate of enzymatic antioxidative systems as compared to the transgenic line-21 tomato fruit. In addition, the results show that the antioxidant capacity is improved during the ripening process and is accompanied by an increase in the oxidative stress.

  4. COMPLEX PROCESSING TECHNOLOGY OF TOMATO RAW MATERIALS

    Directory of Open Access Journals (Sweden)

    A. M. Gadzhieva

    2015-01-01

    Full Text Available Tomatoes grown in the central and southern parts of the country, which contain 5-6 % of solids, including 0.13 % of pectin, 0.86 % of fat, 0.5 % of organic acids; 0.5 % minerals, etc. were used as a subject of research. These tomatoes, grown in the mountains, on soils with high salinity, contain high amounts of valuable components and have a long-term preservation. For the extraction of valuable components from dried tomato pomace CO2 extraction method was applied. Technological and environmental feasibility of tomatoes stage drying in the atmosphere of inert gas in solar dry kiln were evaluated; production scheme of dried tomatoes is improved; a system for tomato pomace drying is developed; a production scheme of powders of pulp, skin and seeds of tomatoes is developed. Combined method of tomato pomace drying involves the simultaneous use of the electromagnetic field of low and ultra-high frequency and blowing product surface with hot nitrogen. Conducting the drying process in an inert gas atmosphere of nitrogen intensified the process of moisture removing from tomatoes. The expediency of using tomato powder as enriching additive was proved. Based on the study of the chemical composition of the tomato powder made from Dagestan varieties of tomatoes, and on the organoleptic evaluation and physico-chemical studies of finished products, we have proved the best degree of recoverability of tomato powder during the production of reconstituted juice and tomato beverages.

  5. Creating context for the experiment record. User-defined metadata: investigations into metadata usage in the LabTrove ELN.

    Science.gov (United States)

    Willoughby, Cerys; Bird, Colin L; Coles, Simon J; Frey, Jeremy G

    2014-12-22

    The drive toward more transparency in research, the growing willingness to make data openly available, and the reuse of data to maximize the return on research investment all increase the importance of being able to find information and make links to the underlying data. The use of metadata in Electronic Laboratory Notebooks (ELNs) to curate experiment data is an essential ingredient for facilitating discovery. The University of Southampton has developed a Web browser-based ELN that enables users to add their own metadata to notebook entries. A survey of these notebooks was completed to assess user behavior and patterns of metadata usage within ELNs, while user perceptions and expectations were gathered through interviews and user-testing activities within the community. The findings indicate that while some groups are comfortable with metadata and are able to design a metadata structure that works effectively, many users are making little attempts to use it, thereby endangering their ability to recover data in the future. A survey of patterns of metadata use in these notebooks, together with feedback from the user community, indicated that while a few groups are comfortable with metadata and are able to design a metadata structure that works effectively, many users adopt a "minimum required" approach to metadata. To investigate whether the patterns of metadata use in LabTrove were unusual, a series of surveys were undertaken to investigate metadata usage in a variety of platforms supporting user-defined metadata. These surveys also provided the opportunity to investigate whether interface designs in these other environments might inform strategies for encouraging metadata creation and more effective use of metadata in LabTrove.

  6. Testing Metadata Existence of Web Map Services

    Directory of Open Access Journals (Sweden)

    Jan Růžička

    2011-05-01

    Full Text Available For a general user is quite common to use data sources available on WWW. Almost all GIS software allow to use data sources available via Web Map Service (ISO/OGC standard interface. The opportunity to use different sources and combine them brings a lot of problems that were discussed many times on conferences or journal papers. One of the problem is based on non existence of metadata for published sources. The question was: were the discussions effective? The article is partly based on comparison of situation for metadata between years 2007 and 2010. Second part of the article is focused only on 2010 year situation. The paper is created in a context of research of intelligent map systems, that can be used for an automatic or a semi-automatic map creation or a map evaluation.

  7. Semantic web technologies for video surveillance metadata

    OpenAIRE

    Poppe, Chris; Martens, Gaëtan; De Potter, Pieterjan; Van de Walle, Rik

    2012-01-01

    Video surveillance systems are growing in size and complexity. Such systems typically consist of integrated modules of different vendors to cope with the increasing demands on network and storage capacity, intelligent video analytics, picture quality, and enhanced visual interfaces. Within a surveillance system, relevant information (like technical details on the video sequences, or analysis results of the monitored environment) is described using metadata standards. However, different module...

  8. Mdmap: A Tool for Metadata Collection and Matching

    Directory of Open Access Journals (Sweden)

    Rico Simke

    2014-10-01

    Full Text Available This paper describes a front-end for the semi-automatic collection, matching, and generation of bibliographic metadata obtained from different sources for use within a digitization architecture. The Library of a Billion Words project is building an infrastructure for digitizing text that requires high-quality bibliographic metadata, but currently only sparse metadata from digitized editions is available. The project’s approach is to collect metadata for each digitized item from as many sources as possible. An expert user can then use an intuitive front-end tool to choose matching metadata. The collected metadata are centrally displayed in an interactive grid view. The user can choose which metadata they want to assign to a certain edition, and export these data as MARCXML. This paper presents a new approach to bibliographic work and metadata correction. We try to achieve a high quality of the metadata by generating a large amount of metadata to choose from, as well as by giving librarians an intuitive tool to manage their data.

  9. Leveraging Metadata to Create Interactive Images... Today!

    Science.gov (United States)

    Hurt, Robert L.; Squires, G. K.; Llamas, J.; Rosenthal, C.; Brinkworth, C.; Fay, J.

    2011-01-01

    The image gallery for NASA's Spitzer Space Telescope has been newly rebuilt to fully support the Astronomy Visualization Metadata (AVM) standard to create a new user experience both on the website and in other applications. We encapsulate all the key descriptive information for a public image, including color representations and astronomical and sky coordinates and make it accessible in a user-friendly form on the website, but also embed the same metadata within the image files themselves. Thus, images downloaded from the site will carry with them all their descriptive information. Real-world benefits include display of general metadata when such images are imported into image editing software (e.g. Photoshop) or image catalog software (e.g. iPhoto). More advanced support in Microsoft's WorldWide Telescope can open a tagged image after it has been downloaded and display it in its correct sky position, allowing comparison with observations from other observatories. An increasing number of software developers are implementing AVM support in applications and an online image archive for tagged images is under development at the Spitzer Science Center. Tagging images following the AVM offers ever-increasing benefits to public-friendly imagery in all its standard forms (JPEG, TIFF, PNG). The AVM standard is one part of the Virtual Astronomy Multimedia Project (VAMP); http://www.communicatingastronomy.org

  10. Azadirachtin powder for control of root-knot nematodes in tomato

    Science.gov (United States)

    USDA ARS Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, 64 Nowelo St., Hilo, HI 96720. Root-knot nematodes cause root galling and yield reductions in many vegetable crops, including tomato. Three organic treatments to improve root growth and reduce nematode infestation were eval...

  11. Growth and physiological response of tomato plants to different periods of nitrogen starvation and recovery

    NARCIS (Netherlands)

    Martinez, V.; Amor, del F.M.; Marcelis, L.F.M.

    2005-01-01

    Young, vegetative-state tomato plants, starved of N for 1, 3 or 7 d, followed, in each case, by a 7-d recovery period with nutrient solution containing N, were examined. Relative growth rate (RGR), leaf photosynthesis and leaf expansion were reduced after only 1 d of N starvation.Tissue N

  12. Non-destructive Measurement of Total Carotenoid Content in Processed Tomato Products

    NARCIS (Netherlands)

    Bicanic, D.; Streza, M.; Dóka, O.; Valinger, D.; Luterotti, S.; Ajtony, Zs; Kurtanjek, Z.; Dadarlat, D.

    2015-01-01

    Carotenes found in a diversity of fruits and vegetables are among important natural antioxidants. In a study described in this paper, the total carotenoid content (TCC) in seven different products derived from thermally processed tomatoes was determined using laser photoacoustic spectroscopy

  13. El virus de la mancha clorótica del tomate: Tomato chlorotic spot virus (TCSV)

    Science.gov (United States)

    Tomato chlorotic spot virus has emerged as a major pathogen of vegetables in Puerto Rico, the Caribbean and Florida. This virus is transmitted by thrips making management difficult. Growers must be aware of the distribution, host range, insect vectors, symptoms, modes of transmission to successfully...

  14. Cytogenetic and molecular studies on tomato chromosomes using diploid tomato and tomato monosomic additions in tetraploid potato

    NARCIS (Netherlands)

    Chang, S.B.

    2004-01-01

    Geneticists have studied the tomato, Lycopersicon esculentum, for several decades and now obtained a saturated linkage map on which numerous genes controlling morphological traits and disease resistances, and molecular markers have been positioned. They also investigated the chromosomes of tomato,

  15. EFFECTIVE COMPLEX PROCESSING OF RAW TOMATOES

    Directory of Open Access Journals (Sweden)

    AIDA M. GADZHIEVA

    2018-03-01

    Full Text Available Tomatoes grown in the central and southern parts of the country, which contain 5 - 6 % of solids, including 0.13 % of pectin, 0.86 % of fat, 0.5 % of organic acids, 0.5 % minerals, etc. are used as research material. These tomatoes, grown in the mountains, on soils with high salinity, contain high amounts of valuable components and have long term preservation. For the extraction of valuable components from dried tomato pomace, the CO2 extraction method is applied. The technological and environmental feasibility of graded tomato drying in the atmosphere of an inert gas and in a solar drier is evaluated; the scheme of dried tomatoes production is improved; a system for tomato pomace drying is developed; a scheme of tomato powder production from pulp, skin and seeds is developed. The combined method of tomato pomace drying involves the simultaneous use of electromagnetic field of low and ultra-high frequency and blowing hot nitrogen on the product surface. Conducting the drying process in the atmosphere of nitrogen intensifies the process of removing moisture from tomatoes. The expediency of using tomato powder as an enriching additive is proved. Based on the study of the chemical composition of the tomato powder made from the Dagestan varieties, and on the organoleptic evaluation and physicochemical analysis of finished products, we prove the best degree of recoverability of tomato powder in the production of reconstituted juice and tomato beverages.

  16. Study on high-level waste geological disposal metadata model

    International Nuclear Information System (INIS)

    Ding Xiaobin; Wang Changhong; Zhu Hehua; Li Xiaojun

    2008-01-01

    This paper expatiated the concept of metadata and its researches within china and abroad, then explain why start the study on the metadata model of high-level nuclear waste deep geological disposal project. As reference to GML, the author first set up DML under the framework of digital underground space engineering. Based on DML, a standardized metadata employed in high-level nuclear waste deep geological disposal project is presented. Then, a Metadata Model with the utilization of internet is put forward. With the standardized data and CSW services, this model may solve the problem in the data sharing and exchanging of different data form A metadata editor is build up in order to search and maintain metadata based on this model. (authors)

  17. An emergent theory of digital library metadata enrich then filter

    CERN Document Server

    Stevens, Brett

    2015-01-01

    An Emergent Theory of Digital Library Metadata is a reaction to the current digital library landscape that is being challenged with growing online collections and changing user expectations. The theory provides the conceptual underpinnings for a new approach which moves away from expert defined standardised metadata to a user driven approach with users as metadata co-creators. Moving away from definitive, authoritative, metadata to a system that reflects the diversity of users’ terminologies, it changes the current focus on metadata simplicity and efficiency to one of metadata enriching, which is a continuous and evolving process of data linking. From predefined description to information conceptualised, contextualised and filtered at the point of delivery. By presenting this shift, this book provides a coherent structure in which future technological developments can be considered.

  18. The role of metadata in managing large environmental science datasets. Proceedings

    Energy Technology Data Exchange (ETDEWEB)

    Melton, R.B.; DeVaney, D.M. [eds.] [Pacific Northwest Lab., Richland, WA (United States); French, J. C. [Univ. of Virginia, (United States)

    1995-06-01

    The purpose of this workshop was to bring together computer science researchers and environmental sciences data management practitioners to consider the role of metadata in managing large environmental sciences datasets. The objectives included: establishing a common definition of metadata; identifying categories of metadata; defining problems in managing metadata; and defining problems related to linking metadata with primary data.

  19. Minimum number and best combinations of harvests to evaluate accessions of tomato plants from germplasm banks

    Directory of Open Access Journals (Sweden)

    Flávia Barbosa Abreu

    2006-01-01

    Full Text Available This study presents the minimum number and the best combination of tomato harvests needed to compare tomato accessions from germplasm banks. Number and weight of fruit in tomato plants are important as auxiliary traits in the evaluation of germplasm banks and should be studied simultaneously with other desirable characteristics such as pest and disease resistance, improved flavor and early production. Brazilian tomato breeding programs should consider not only the number of fruit but also fruit size because Brazilian consumers value fruit that are homogeneous, large and heavy. Our experiment was a randomized block design with three replicates of 32 tomato accessions from the Vegetable Germplasm Bank (Banco de Germoplasma de Hortaliças at the Federal University of Viçosa, Minas Gerais, Brazil plus two control cultivars (Debora Plus and Santa Clara. Nine harvests were evaluated for four production-related traits. The results indicate that six successive harvests are sufficient to compare tomato genotypes and germplasm bank accessions. Evaluation of genotypes according to the number of fruit requires analysis from the second to the seventh harvest. Evaluation of fruit weight by genotype requires analysis from the fourth to the ninth harvest. Evaluation of both number and weight of fruit require analysis from the second to the ninth harvest.

  20. High speed intelligent classifier of tomatoes by colour, size and weight

    Energy Technology Data Exchange (ETDEWEB)

    Cement, J.; Novas, N.; Gazquez, J. A.; Manzano-Agugliaro, F.

    2012-11-01

    At present most horticultural products are classified and marketed according to quality standards, which provide a common language for growers, packers, buyers and consumers. The standardisation of both product and packaging enables greater speed and efficiency in management and marketing. Of all the vegetables grown in greenhouses, tomatoes are predominant in both surface area and tons produced. This paper will present the development and evaluation of a low investment classification system of tomatoes with these objectives: to put it at the service of producing farms and to classify for trading standards. An intelligent classifier of tomatoes has been developed by weight, diameter and colour. This system has optimised the necessary algorithms for data processing in the case of tomatoes, so that productivity is greatly increased, with the use of less expensive and lower performance electronics. The prototype is able to achieve very high speed classification, 12.5 ratings per second, using accessible and low cost commercial equipment for this. It decreases fourfold the manual sorting time and is not sensitive to the variety of tomato classified. This system facilitates the processes of standardisation and quality control, increases the competitiveness of tomato farms and impacts positively on profitability. The automatic classification system described in this work represents a contribution from the economic point of view, as it is profitable for a farm in the short term (less than six months), while the existing systems, can only be used in large trading centers. (Author) 36 refs.

  1. Isolation, identification, and biocontrol of antagonistic bacterium against Botrytis cinerea after tomato harvest

    Directory of Open Access Journals (Sweden)

    Jun-Feng Shi

    Full Text Available ABSTRACT Tomato is one of the most important vegetables in the world. Decay after harvest is a major issue in the development of tomato industry. Currently, the most effective method for controlling decay after harvest is storage of tomato at low temperature combined with usage of chemical bactericide; however, long-term usage of chemical bactericide not only causes pathogen resistance but also is harmful for human health and environment. Biocontrol method for the management of disease after tomato harvest has great practical significance. In this study, antagonistic bacterium B-6-1 strain was isolated from the surface of tomato and identified as Enterobacter cowanii based on morphological characteristics and physiological and biochemical features combined with sequence analysis of 16SrDNA and ropB gene and construction of dendrogram. Effects of different concentrations of antagonistic bacterium E. cowanii suspension on antifungal activity after tomato harvest were analyzed by mycelium growth rate method. Results revealed that antifungal activity was also enhanced with increasing concentrations of antagonistic bacterium; inhibitory rates of 1 × 105 colony-forming units (cfu/mL antagonistic bacterial solution on Fusarium verticillioides, Alternaria tenuissima, and Botrytis cinerea were 46.31%, 67.48%, and 75.67%, respectively. By using in vivo inoculation method, it was further confirmed that antagonistic bacterium could effectively inhibit the occurrence of B. cinerae after tomato harvest, biocontrol effect of 1 × 109 cfu/mL zymotic fluid reached up to 95.24%, and antagonistic bacterium E. cowanii has biocontrol potential against B. cinerea after harvest of fruits and vegetables.

  2. CMO: Cruise Metadata Organizer for JAMSTEC Research Cruises

    Science.gov (United States)

    Fukuda, K.; Saito, H.; Hanafusa, Y.; Vanroosebeke, A.; Kitayama, T.

    2011-12-01

    JAMSTEC's Data Research Center for Marine-Earth Sciences manages and distributes a wide variety of observational data and samples obtained from JAMSTEC research vessels and deep sea submersibles. Generally, metadata are essential to identify data and samples were obtained. In JAMSTEC, cruise metadata include cruise information such as cruise ID, name of vessel, research theme, and diving information such as dive number, name of submersible and position of diving point. They are submitted by chief scientists of research cruises in the Microsoft Excel° spreadsheet format, and registered into a data management database to confirm receipt of observational data files, cruise summaries, and cruise reports. The cruise metadata are also published via "JAMSTEC Data Site for Research Cruises" within two months after end of cruise. Furthermore, these metadata are distributed with observational data, images and samples via several data and sample distribution websites after a publication moratorium period. However, there are two operational issues in the metadata publishing process. One is that duplication efforts and asynchronous metadata across multiple distribution websites due to manual metadata entry into individual websites by administrators. The other is that differential data types or representation of metadata in each website. To solve those problems, we have developed a cruise metadata organizer (CMO) which allows cruise metadata to be connected from the data management database to several distribution websites. CMO is comprised of three components: an Extensible Markup Language (XML) database, an Enterprise Application Integration (EAI) software, and a web-based interface. The XML database is used because of its flexibility for any change of metadata. Daily differential uptake of metadata from the data management database to the XML database is automatically processed via the EAI software. Some metadata are entered into the XML database using the web

  3. A web-based, dynamic metadata interface to MDSplus

    International Nuclear Information System (INIS)

    Gardner, Henry J.; Karia, Raju; Manduchi, Gabriele

    2008-01-01

    We introduce the concept of a Fusion Data Grid and discuss the management of metadata within such a Grid. We describe a prototype application which serves fusion data over the internet together with metadata information which can be flexibly created and modified over time. The application interfaces with the MDSplus data acquisition system and it has been designed to capture metadata which is generated by scientists from the post-processing of experimental data. The implementation of dynamic metadata tables using the Java programming language together with an object-relational mapping system, Hibernate, is described in the Appendix

  4. Managing thrips and tospoviruses in tomato

    Science.gov (United States)

    Tomato spotted wilt virus and more recently emerged Tomato chlorotic spot virus and Groundnut ringspot virus are all transmitted by thrips, making managment complex. All three viruses and the thrips vector are major pests of tomato in Florida. Current management tools for these viruses and the th...

  5. Carotenes in processed tomato after thermal treatment

    NARCIS (Netherlands)

    Luterotti, S.; Bicanic, D.D.; Markovic, K.; Franko, M.

    2015-01-01

    This report adds to the ongoing vivid dispute on the fate of carotenes in tomato upon thermal processing. Although many papers dealing with changes in the raw tomatoes during industrial treatment have already appeared, data on the fate of finished, processed tomato products when they are

  6. CONSIDERATIONS ON ROMANIA’S VEGETABLE MARKET

    Directory of Open Access Journals (Sweden)

    Agatha POPESCU

    2013-12-01

    Full Text Available The paper aimed to present the situation of Romania’s vegetable market in the period 2007-2011 based on the statistical data regarding the main vegetables: tomatoes, onion, garlic, cabbage, green peppers and melons. The vegetable production increased by 33.99 from 3,166.8 tons in 2007 to 4,176.3 tons in 2011.This was due to the yield gain as follows: 58.55 % for melons, 27.62 % for green peppers, 27.05 % for tomatoes, 25.99 % for dry garlic, 24.96 % for dry onion, 12.61 % for white cabbage. In 2011, the contribution of various categories of vegetables to production was: 24.55 % white cabbage, 21.81 % tomatoes, 15.45 % melons, 9.44 % onion, 6.06 % green pepper, 1.59 % garlic and 21.1 % other vegetables. The contribution of the micro regions to vegetable production in 2011 was: 19.46 % South Muntenia, 18.95 % South East Romania, 17.30 % South West Oltenia, 15.92 % North East Romania, 10.43 % West Romania, 8.47 % North West Romania, 6.54 % Central Romania, 2.93 % Bucharest Ilfov. Vegetable production per inhabitant is higher in Romania compared to the average production per capita in the EU. The average consumption increased as a postive aspect reflecting the obtained production and import. Vegetable production should increase in order to cover much better the doestic market needs and support export to the EU market.

  7. Assessing Salinity in Cotton and Tomato Plants by Using Reflectance Spectroscopy

    Science.gov (United States)

    Goldshleger, Naftaly

    2016-04-01

    Irrigated lands in semi-arid and arid areas are subjected to salinization processes. An example of this phenomenon is the Jezreel Valley in northern Israel where soil salinity has increased over the years. The increase in soil salinity results in the deterioration of the soil structure and crops damage. In this experiment we quantified the relation between the chemical and spectral features of cotton and tomato plants and their mutual relationship to soil salinity. The experiment was carried out as part of ongoing research aiming to detect and monitor saline soils and vegetation by combining different remote sensing methods. The aim of this study was to use vegetation reflectance measurements to predict foliar Cl and Na concentration and assess salinity in the soil and in vegetation by their reflectance measurements. The model developed for determining concentrations of chlorine and sodium in tomato and cotton produced good results ( R2 = 0.92 for sodium and 0.85 for chlorine in tomato and R2 = 0.84 for sodium and 0.82 for chlorine in cotton). Lately, we extend the method to calculate vegetation salinity, by doing correlation between the reflectance slopes of the tested crops CL and Na from two research areas. The developed model produced a good results for all the data (R2=0.74) Our method can be implemented to assess vegetation salinity ahead of planting, and developed as a generic tool for broader use for agriculture in semi-arid regions. In our opinion these results show the possibility of monitoring for a threshold level of salinity in tomato and cotton leaves so remedial action can be taken in time to prevent crop damage. Our results strongly suggest that future imaging spectroscopy remote sensing measurements collected by airborne and satellite platforms could measure the salinity of soil and vegetation over larger areas. These results can be the first steps for generic a model which includes more vegetation for salinity measurements.

  8. Gamma-irradiation of tomatoes

    International Nuclear Information System (INIS)

    Tencheva, S.; Todorov, S.

    1975-01-01

    The influence of gamma-ray on tomatoes picked in a pink-red ripening stage, good for consumption, is studied. For that purpose tomatoes of ''Pioneer 2'' variety packed in perforated 500 g plastic bags were irradiated on a gamma device (Cobalt-60) at a dose power of 1900 rad/min with doses 200 or 300 krad. Samples were stored after irradiation at room temperature (20 - 22sup(o)C). Microbiological studies demonstrated that 44 resp. 99.96 per cent of the initial number of microorganisms was destroyed after irradiation with 200 resp. 300 krad. The time required for the number of microorganisms to be restored was accordingly increased. Irradiation delayed tomato ripening by 4 to 6 days, demonstrable by the reduced content of the basic staining substances - carotene and licopine. Immediately after irradiation the ascorbic acid content was reduced by an average of 13 per cent. After 18 days the amount of ascorbic acid in irradiated tomatoes was increased to a higher than the starting level, this is attributed to reductone formation during irradiation. The elevated total sugar content shown to be invert sugar was due to further tomato ripening. (Ch.K.)

  9. Preservation of fruits and vegetables using solar dryers. A comparative study for solar and natural drying of grapes, figs, tomatoes and onions. IV. temperature measurements, calculating the generated energy and dryer efficiency during drying

    International Nuclear Information System (INIS)

    Sehery, A.A.; Gallali, Y.M.; Shoshan, H.

    2000-01-01

    This study has taken four axis, first, design and construction of the dryer, secondly, microbial load determination, thirdly, chemical and sensory evaluation data. The results of these three parts were published earlier at the International Congress on Application of Solar and Renewable Energy, Food Science and Technology and World Renewable Energy Congress V, Cairo, Egypt, 1992, 1996 and Florence, Italy, 1998, respectively. The whole study was oriented towards comparing the solar (three modes, direct, indirect, and mixed) and natural drying. The fourth part of the study is dealing with some parameters affecting drying as temperature measurement, calculating the generated energy and the dryer efficiency during drying periods. Drying temperature is considered the most important factor in the drying operation, since the accuracy of temperature measurement gives the correct results and right indication for the approval of these scientific methods in the drying operation and the design of solar dryers. In this project, we depended on temperature measurements at different points by means of thermocouples fixed in the heat collector and the drying chamber. The average temperature outside the dryer ranged from 21-41 degree C. That of the heat collector were 40-75 degree C and those of the drying chamber were in the range of 40-73 degree C. The radiation measurements calculated depending on the results recorded by the solar center instruments from 5/8/95 - 16/10/95. The thermal energy existing from the heat collector to the drying chamber during the drying period was measured using the equation of Holland. From the investigation results, we can conclude that in all trials, solar drying was a more efficient method for drying all samples of fruits and vegetables, especially for grapes, figs and onion. Grapes dried using mixed mode from 83 % to 30 % moisture in 4 days at an average temperature of 55 degree C while natural drying reduced the moisture to 57% for the same period

  10. Inheritance rules for Hierarchical Metadata Based on ISO 19115

    Science.gov (United States)

    Zabala, A.; Masó, J.; Pons, X.

    2012-04-01

    Mainly, ISO19115 has been used to describe metadata for datasets and services. Furthermore, ISO19115 standard (as well as the new draft ISO19115-1) includes a conceptual model that allows to describe metadata at different levels of granularity structured in hierarchical levels, both in aggregated resources such as particularly series, datasets, and also in more disaggregated resources such as types of entities (feature type), types of attributes (attribute type), entities (feature instances) and attributes (attribute instances). In theory, to apply a complete metadata structure to all hierarchical levels of metadata, from the whole series to an individual feature attributes, is possible, but to store all metadata at all levels is completely impractical. An inheritance mechanism is needed to store each metadata and quality information at the optimum hierarchical level and to allow an ease and efficient documentation of metadata in both an Earth observation scenario such as a multi-satellite mission multiband imagery, as well as in a complex vector topographical map that includes several feature types separated in layers (e.g. administrative limits, contour lines, edification polygons, road lines, etc). Moreover, and due to the traditional split of maps in tiles due to map handling at detailed scales or due to the satellite characteristics, each of the previous thematic layers (e.g. 1:5000 roads for a country) or band (Landsat-5 TM cover of the Earth) are tiled on several parts (sheets or scenes respectively). According to hierarchy in ISO 19115, the definition of general metadata can be supplemented by spatially specific metadata that, when required, either inherits or overrides the general case (G.1.3). Annex H of this standard states that only metadata exceptions are defined at lower levels, so it is not necessary to generate the full registry of metadata for each level but to link particular values to the general value that they inherit. Conceptually the metadata

  11. Semantic Web: Metadata, Linked Data, Open Data

    Directory of Open Access Journals (Sweden)

    Vanessa Russo

    2015-12-01

    Full Text Available What's the Semantic Web? What's the use? The inventor of the Web Tim Berners-Lee describes it as a research methodology able to take advantage of the network to its maximum capacity. This metadata system represents the innovative element through web 2.0 to web 3.0. In this context will try to understand what are the theoretical and informatic requirements of the Semantic Web. Finally will explain Linked Data applications to develop new tools for active citizenship.

  12. Information resource description creating and managing metadata

    CERN Document Server

    Hider, Philip

    2012-01-01

    An overview of the field of information organization that examines resource description as both a product and process of the contemporary digital environment.This timely book employs the unifying mechanism of the semantic web and the resource description framework to integrate the various traditions and practices of information and knowledge organization. Uniquely, it covers both the domain-specific traditions and practices and the practices of the ?metadata movement' through a single lens ? that of resource description in the broadest, semantic web sense.This approach more readily accommodate

  13. Metadata: A user`s view

    Energy Technology Data Exchange (ETDEWEB)

    Bretherton, F.P. [Univ. of Wisconsin, Madison, WI (United States); Singley, P.T. [Oak Ridge National Lab., TN (United States)

    1994-12-31

    An analysis is presented of the uses of metadata from four aspects of database operations: (1) search, query, retrieval, (2) ingest, quality control, processing, (3) application to application transfer; (4) storage, archive. Typical degrees of database functionality ranging from simple file retrieval to interdisciplinary global query with metadatabase-user dialog and involving many distributed autonomous databases, are ranked in approximate order of increasing sophistication of the required knowledge representation. An architecture is outlined for implementing such functionality in many different disciplinary domains utilizing a variety of off the shelf database management subsystems and processor software, each specialized to a different abstract data model.

  14. DES-TOMATO: A Knowledge Exploration System Focused On Tomato Species

    KAUST Repository

    Salhi, Adil; Negrã o, Só nia; Essack, Magbubah; Morton, Mitchell J. L.; Bougouffa, Salim; Mohamad Razali, Rozaimi; Radovanovic, Aleksandar; Marchand, Benoit; Kulmanov, Maxat; Hoehndorf, Robert; Tester, Mark A.; Bajic, Vladimir B.

    2017-01-01

    Tomato is the most economically important horticultural crop used as a model to study plant biology and particularly fruit development. Knowledge obtained from tomato research initiated improvements in tomato and, being transferrable to other such economically important crops, has led to a surge of tomato-related research and published literature. We developed DES-TOMATO knowledgebase (KB) for exploration of information related to tomato. Information exploration is enabled through terms from 26 dictionaries and combination of these terms. To illustrate the utility of DES-TOMATO, we provide several examples how one can efficiently use this KB to retrieve known or potentially novel information. DES-TOMATO is free for academic and nonprofit users and can be accessed at http://cbrc.kaust.edu.sa/des_tomato/, using any of the mainstream web browsers, including Firefox, Safari and Chrome.

  15. DES-TOMATO: A Knowledge Exploration System Focused On Tomato Species

    KAUST Repository

    Salhi, Adil

    2017-07-14

    Tomato is the most economically important horticultural crop used as a model to study plant biology and particularly fruit development. Knowledge obtained from tomato research initiated improvements in tomato and, being transferrable to other such economically important crops, has led to a surge of tomato-related research and published literature. We developed DES-TOMATO knowledgebase (KB) for exploration of information related to tomato. Information exploration is enabled through terms from 26 dictionaries and combination of these terms. To illustrate the utility of DES-TOMATO, we provide several examples how one can efficiently use this KB to retrieve known or potentially novel information. DES-TOMATO is free for academic and nonprofit users and can be accessed at http://cbrc.kaust.edu.sa/des_tomato/, using any of the mainstream web browsers, including Firefox, Safari and Chrome.

  16. Metadata Laws, Journalism and Resistance in Australia

    Directory of Open Access Journals (Sweden)

    Benedetta Brevini

    2017-03-01

    Full Text Available The intelligence leaks from Edward Snowden in 2013 unveiled the sophistication and extent of data collection by the United States’ National Security Agency and major global digital firms prompting domestic and international debates about the balance between security and privacy, openness and enclosure, accountability and secrecy. It is difficult not to see a clear connection with the Snowden leaks in the sharp acceleration of new national security legislations in Australia, a long term member of the Five Eyes Alliance. In October 2015, the Australian federal government passed controversial laws that require telecommunications companies to retain the metadata of their customers for a period of two years. The new acts pose serious threats for the profession of journalism as they enable government agencies to easily identify and pursue journalists’ sources. Bulk data collections of this type of information deter future whistleblowers from approaching journalists, making the performance of the latter’s democratic role a challenge. After situating this debate within the scholarly literature at the intersection between surveillance studies and communication studies, this article discusses the political context in which journalists are operating and working in Australia; assesses how metadata laws have affected journalism practices and addresses the possibility for resistance.

  17. SPASE, Metadata, and the Heliophysics Virtual Observatories

    Science.gov (United States)

    Thieman, James; King, Todd; Roberts, Aaron

    2010-01-01

    To provide data search and access capability in the field of Heliophysics (the study of the Sun and its effects on the Solar System, especially the Earth) a number of Virtual Observatories (VO) have been established both via direct funding from the U.S. National Aeronautics and Space Administration (NASA) and through other funding agencies in the U.S. and worldwide. At least 15 systems can be labeled as Virtual Observatories in the Heliophysics community, 9 of them funded by NASA. The problem is that different metadata and data search approaches are used by these VO's and a search for data relevant to a particular research question can involve consulting with multiple VO's - needing to learn a different approach for finding and acquiring data for each. The Space Physics Archive Search and Extract (SPASE) project is intended to provide a common data model for Heliophysics data and therefore a common set of metadata for searches of the VO's. The SPASE Data Model has been developed through the common efforts of the Heliophysics Data and Model Consortium (HDMC) representatives over a number of years. We currently have released Version 2.1 of the Data Model. The advantages and disadvantages of the Data Model will be discussed along with the plans for the future. Recent changes requested by new members of the SPASE community indicate some of the directions for further development.

  18. Metadata Access Tool for Climate and Health

    Science.gov (United States)

    Trtanji, J.

    2012-12-01

    The need for health information resources to support climate change adaptation and mitigation decisions is growing, both in the United States and around the world, as the manifestations of climate change become more evident and widespread. In many instances, these information resources are not specific to a changing climate, but have either been developed or are highly relevant for addressing health issues related to existing climate variability and weather extremes. To help address the need for more integrated data, the Interagency Cross-Cutting Group on Climate Change and Human Health, a working group of the U.S. Global Change Research Program, has developed the Metadata Access Tool for Climate and Health (MATCH). MATCH is a gateway to relevant information that can be used to solve problems at the nexus of climate science and public health by facilitating research, enabling scientific collaborations in a One Health approach, and promoting data stewardship that will enhance the quality and application of climate and health research. MATCH is a searchable clearinghouse of publicly available Federal metadata including monitoring and surveillance data sets, early warning systems, and tools for characterizing the health impacts of global climate change. Examples of relevant databases include the Centers for Disease Control and Prevention's Environmental Public Health Tracking System and NOAA's National Climate Data Center's national and state temperature and precipitation data. This presentation will introduce the audience to this new web-based geoportal and demonstrate its features and potential applications.

  19. Influence of simulated Quinclorac drift on the accumulation and movement of herbicide in tomato (Lycopersicon esculentum) plants.

    Science.gov (United States)

    Lovelace, Michael L; Hoagland, Robert E; Talbert, Ronald E; Scherder, Eric F

    2009-07-22

    Quinclorac (3,7-dichloro-8-quinolinecarboxylic acid) is a herbicide commonly used in rice, and its drift has been suspected of causing injury to off-target tomato fields throughout Arkansas. Studies were conducted to evaluate the effects of single and multiple simulated quinclorac drift applications on tomato plant growth and development. Residues extracted from tomato plants treated with 0.42 g of ai ha(-1) were below the detection limit of liquid chromatography-double mass spectrometry (LC-MS/MS) analysis. Quinclorac residue levels and half-lives in tomato tissue increased as the application rate and number of applications increased. From 3 to 72 h after (14)C-quinclorac treatment of plants, most of the absorbed (14)C was retained in the treated leaf, and translocations of (14)C out of the treated leaf of vegetative and flowering tomato plant tissues were similar. Of the (14)C that translocated out of the treated leaf, the greatest movement was acropetally. The flower cluster contained 1% of the total absorbed (14)C, which suggests the potential for quinclorac translocation into tomato fruit. More extensive research will be required to understand the impact that quinclorac may have on tomato production in the area.

  20. Tomato (Solanum lycopersicum) variety discrimination and hybridization analysis based on the 5S rRNA region.

    Science.gov (United States)

    Sun, Yan-Lin; Kang, Ho-Min; Kim, Young-Sik; Baek, Jun-Pill; Zheng, Shi-Lin; Xiang, Jin-Jun; Hong, Soon-Kwan

    2014-05-04

    The tomato ( Solanum lycopersicum ) is a major vegetable crop worldwide. To satisfy popular demand, more than 500 tomato varieties have been bred. However, a clear variety identification has not been found. Thorough understanding of the phylogenetic relationship and hybridization information of tomato varieties is very important for further variety breeding. Thus, in this study, we collected 26 tomato varieties and attempted to distinguish them based on the 5S rRNA region, which is widely used in the determination of phylogenetic relations. Sequence analysis of the 5S rRNA region suggested that a large number of nucleotide variations exist among tomato varieties. These variable nucleotide sites were also informative regarding hybridization. Chromas sequencing of Yellow Mountain View and Seuwiteuking varieties indicated three and one variable nucleotide sites in the non-transcribed spacer (NTS) of the 5S rRNA region showing hybridization, respectively. Based on a phylogenetic tree constructed using the 5S rRNA sequences, we observed that 16 tomato varieties were divided into three groups at 95% similarity. Rubiking and Sseommeoking, Lang Selection Procedure and Seuwiteuking, and Acorn Gold and Yellow Mountain View exhibited very high identity with their partners. This work will aid variety authentication and provides a basis for further tomato variety breeding.

  1. Metadata as a means for correspondence on digital media

    NARCIS (Netherlands)

    Stouffs, R.; Kooistra, J.; Tuncer, B.

    2004-01-01

    Metadata derive their action from their association to data and from the relationship they maintain with this data. An interpretation of this action is that the metadata lays claim to the data collection to which it is associated, where the claim is successful if the data collection gains quality as

  2. Learning Object Metadata in a Web-Based Learning Environment

    NARCIS (Netherlands)

    Avgeriou, Paris; Koutoumanos, Anastasios; Retalis, Symeon; Papaspyrou, Nikolaos

    2000-01-01

    The plethora and variance of learning resources embedded in modern web-based learning environments require a mechanism to enable their structured administration. This goal can be achieved by defining metadata on them and constructing a system that manages the metadata in the context of the learning

  3. Shared Geospatial Metadata Repository for Ontario University Libraries: Collaborative Approaches

    Science.gov (United States)

    Forward, Erin; Leahey, Amber; Trimble, Leanne

    2015-01-01

    Successfully providing access to special collections of digital geospatial data in academic libraries relies upon complete and accurate metadata. Creating and maintaining metadata using specialized standards is a formidable challenge for libraries. The Ontario Council of University Libraries' Scholars GeoPortal project, which created a shared…

  4. Handling Procedures of Vegetable Crops

    Science.gov (United States)

    Perchonok, Michele; French, Stephen J.

    2004-01-01

    The National Aeronautics and Space Administration (NASA) is working towards future long duration manned space flights beyond low earth orbit. The duration of these missions may be as long as 2.5 years and will likely include a stay on a lunar or planetary surface. The primary goal of the Advanced Food System in these long duration exploratory missions is to provide the crew with a palatable, nutritious, and safe food system while minimizing volume, mass, and waste. Vegetable crops can provide the crew with added nutrition and variety. These crops do not require any cooking or food processing prior to consumption. The vegetable crops, unlike prepackaged foods, will provide bright colors, textures (crispy), and fresh aromas. Ten vegetable crops have been identified for possible use in long duration missions. They are lettuce, spinach, carrot, tomato, green onion, radish, bell pepper, strawberries, fresh herbs, and cabbage. Whether these crops are grown on a transit vehicle (e.g., International Space Station) or on the lunar or planetary surface, it will be necessary to determine how to safely handle the vegetables while maintaining acceptability. Since hydrogen peroxide degrades into water and oxygen and is generally recognized as safe (GRAS), hydrogen peroxide has been recommended as the sanitizer. The objective of th is research is to determine the required effective concentration of hydrogen peroxide. In addition, it will be determined whether the use of hydrogen peroxide, although a viable sanitizer, adversely affects the quality of the vegetables. Vegetables will be dipped in 1 % hydrogen peroxide, 3% hydrogen peroxide, or 5% hydrogen peroxide. Treated produce and controls will be stored in plastic bags at 5 C for up to 14 days. Sensory, color, texture, and total plate count will be measured. The effect on several vegetables including lettuce, radish, tomato and strawberries has been completed. Although each vegetable reacts to hydrogen peroxide differently, the

  5. Developing Cyberinfrastructure Tools and Services for Metadata Quality Evaluation

    Science.gov (United States)

    Mecum, B.; Gordon, S.; Habermann, T.; Jones, M. B.; Leinfelder, B.; Powers, L. A.; Slaughter, P.

    2016-12-01

    Metadata and data quality are at the core of reusable and reproducible science. While great progress has been made over the years, much of the metadata collected only addresses data discovery, covering concepts such as titles and keywords. Improving metadata beyond the discoverability plateau means documenting detailed concepts within the data such as sampling protocols, instrumentation used, and variables measured. Given that metadata commonly do not describe their data at this level, how might we improve the state of things? Giving scientists and data managers easy to use tools to evaluate metadata quality that utilize community-driven recommendations is the key to producing high-quality metadata. To achieve this goal, we created a set of cyberinfrastructure tools and services that integrate with existing metadata and data curation workflows which can be used to improve metadata and data quality across the sciences. These tools work across metadata dialects (e.g., ISO19115, FGDC, EML, etc.) and can be used to assess aspects of quality beyond what is internal to the metadata such as the congruence between the metadata and the data it describes. The system makes use of a user-friendly mechanism for expressing a suite of checks as code in popular data science programming languages such as Python and R. This reduces the burden on scientists and data managers to learn yet another language. We demonstrated these services and tools in three ways. First, we evaluated a large corpus of datasets in the DataONE federation of data repositories against a metadata recommendation modeled after existing recommendations such as the LTER best practices and the Attribute Convention for Dataset Discovery (ACDD). Second, we showed how this service can be used to display metadata and data quality information to data producers during the data submission and metadata creation process, and to data consumers through data catalog search and access tools. Third, we showed how the centrally

  6. Competitiveness of tomato production in punjab, pakistan

    International Nuclear Information System (INIS)

    Akhtar, W.; Qureshi, A.H.; Khan, M.A.

    2016-01-01

    The study measures competitiveness at farm level and economic efficiency at country level of tomato production in relation to tomato trade by using Policy Analysis Matrix (PAM) framework in Punjab, Pakistan. The province was divided into two tomato production regions i.e., Central and Southern Punjab for analysis purpose under importable scenario by using import parity price. Results of PAM model revealed that tomato production in both regions of Punjab has competitiveness under prevailing market situation as indicated by positive private profitability and private cost ratio (PCR) which is less than 1. Competitiveness difference in two regions indicated that Central Punjab has more competitiveness at farm level in tomato production. Economic efficiency results i.e. Domestic Resource Cost (DRC) ratio remained 0.39 and 0.51 in Central and Southern Punjab, respectively with positive social profitability indicating strong comparative advantage under importable scenario. The above results implied that Central Punjab has greater economic efficiency than Southern Punjab in domestic resources use for production of tomato as import substitute commodity. Results of Nominal Protection Coefficient (NPC) and Effective Protection Coefficient (EPC) indicated that combine effects of policies on output and tradable input market did not pass any protection to tomato farmers in the study area. Net effect of policy or market failure is reducing the profitability of tomato producers at farm level which indicates lack of motivation from policies for farmers to expand tomato production as import substitute crop. Present study recommended competitiveness and economic efficiency analysis in other tomato producing regions of the country for year round tomato supply on the basis of resource efficiency and to curtail tomato imports to save the precious foreign exchange. To enhance the competitiveness there is need to increase farmer's incentives through increase of farm level price up to

  7. [Differentiated perception of transgenic tomato sauce in the southern Chile].

    Science.gov (United States)

    Schnettler Morales, B; Sepúlveda Bravo, O; Ruiz Fuentes, D; Denegri Coria, M

    2008-03-01

    The present study considers the debate generated in developed countries by genetically modified foods, the importance of this variable to consumers in Temuco (Araucanía Region, Chile) when purchasing tomato sauce and different market segments were studied through a personal survey administered to 400 people. Using conjoint analysis, it was determined that the presence of genetic modification in food was generally more important than the brand and purchase price. Using cluster analysis, three segments were distinguished, with the most numerous (49.3%) placing the greatest importance on the presence of genetic modification (GM) in food and rejecting the transgenic product. The second group (39.4%) gave the greatest importance to the brand and preferred tomato sauce with genetically modified ingredients. The smallest segment (11.3%) placed the greatest value on price and preferred transgenic tomato sauce. The three segments prefer the national brand, reject the store brand and react positively to lower prices. The segment sensitive to the presence of GM in food comprised mainly those younger than 35 years of age, single and with no children. The absence of GM in food of vegetable origin is desirable for young consumers in the Araucanía Region, but a significant proportion accepts genetic modification in food (50.7%).

  8. New opportunities for developing tomato varieties with enhanced carotenoid content

    Directory of Open Access Journals (Sweden)

    Miguel Leiva-Brondo

    Full Text Available ABSTRACT The development of varieties with a high content of antioxidant compounds, such as carotenoids, has become a major focus in the marketing of tomato. Several mutants have been used in the development of high pigment varieties, but the significant influence of the environment on carotenoid content and the presence of negative side effects in vegetative growth and yield have limited the success of these variants. Consequently, the identification of alternative sources of variation in the quest for high carotenoid content is ongoing. In this study, 12 accessions of Solanum lycopersicum (including the former var cerasiforme and S. pimpinelifolium have been evaluated in three different environments: open field and glasshouse cultivation at two sites. Three accessions (BGV6195 of S. pimpinellifolium, LA1423 of the former var cerasiforme and LA3633 a possible hybrid between S. pimpinellifolium and S. lycopersicum showed outstanding and stable lycopene content, that doubled in all three environments the content of the positive control LA3538, with the high pigment-1 mutation (hp1. In addition, accession CATIE14812 would also be interesting as regards improvement of β-carotene content. These materials offer new opportunities in the development of tomato varieties with enriched and reliable carotenoid content and the close taxonomic relationship of these accessions with cultivated tomato will facilitate their use in breeding programs.

  9. Obtaining of Grafted Planting Material at Some Romanian Tomatoes

    Directory of Open Access Journals (Sweden)

    Madalina Doltu

    2016-11-01

    Full Text Available The tomatoes have highest share in Romanian crops from protected spaces (greenhouses, solariums. The grafting is an agronomical technique that induces or improves some qualities of the tomato cultivars (resistance to soil diseases and pests, resistance to abiotic factors, quantity and quality of fruit production. The research was aimed the establishing of the technological stages for producing of scion and rootstock seedlings from L. esculentum species, to obtain compatible phenotype when is grafted. The observations of this research were conducted on Department of Horticultural Cultures in Protected Spaces from Horting Institute Bucharest. The experience was carry out on a cultivar collection consisting from L. esculentum plants: scions (‘Siriana’–F1 hybrid and ‘Buzău 1600’– variety, creations from the germplasm bank of Research and Development Station for Vegetable Growing Buzău Romania (VDRS Buzău and rootstock (‘Groundforce’–F1 hybrid. The plant diameters were correlated for a grafting by the annexation method, cutting at 45 degrees. The grafting was performed successfully. The technological steps have achieved phenotypic compatibility of the symbiotes when was the grafting by annexation. The technology for producing of scion and rootstock seedlings at these Romanian tomatoes (‘Siriana’ and ‘Buzău’ 1600 was established for the crops in protected spaces in south area of Romania.

  10. Efficacy of zinc with nitrogen as foliar feeding on growth, yield and quality of tomato grown under poly tunnel

    International Nuclear Information System (INIS)

    Awan, A.A.; Abbas, S.J.; Ullah, E.

    2012-01-01

    Zinc (Zn) deficiency is considered one of nutritional constraints for crop yield worldwide. In recent past, the deficiency of Zn has heavily declined the quality of vegetables, especially tomato. Thus, a study was planned to enhance the growth, yield and quality of tomato plant using Zn and N alone and in combination. ZnSO/sub 4/ was used as a source of Zn (10% and 12%) and urea as source of N (1% and 2%). The results showed that application of either Zn or N alone at both concentrations enhanced growth, yield and quality of tomato plants under poly tunnel. However, the combined use of both Zn and N further enhanced the growth, yield and fruit quality with application of Zn (12%) plus N (2%). Hence the combined use of Zn and N can be a viable strategy for improving yield and quality of tomato. (author)

  11. Making the Case for Embedded Metadata in Digital Images

    DEFF Research Database (Denmark)

    Smith, Kari R.; Saunders, Sarah; Kejser, U.B.

    2014-01-01

    This paper discusses the standards, methods, use cases, and opportunities for using embedded metadata in digital images. In this paper we explain the past and current work engaged with developing specifications, standards for embedding metadata of different types, and the practicalities of data...... exchange in heritage institutions and the culture sector. Our examples and findings support the case for embedded metadata in digital images and the opportunities for such use more broadly in non-heritage sectors as well. We encourage the adoption of embedded metadata by digital image content creators...... and curators as well as those developing software and hardware that support the creation or re-use of digital images. We conclude that the usability of born digital images as well as physical objects that are digitized can be extended and the files preserved more readily with embedded metadata....

  12. Managing ebook metadata in academic libraries taming the tiger

    CERN Document Server

    Frederick, Donna E

    2016-01-01

    Managing ebook Metadata in Academic Libraries: Taming the Tiger tackles the topic of ebooks in academic libraries, a trend that has been welcomed by students, faculty, researchers, and library staff. However, at the same time, the reality of acquiring ebooks, making them discoverable, and managing them presents library staff with many new challenges. Traditional methods of cataloging and managing library resources are no longer relevant where the purchasing of ebooks in packages and demand driven acquisitions are the predominant models for acquiring new content. Most academic libraries have a complex metadata environment wherein multiple systems draw upon the same metadata for different purposes. This complexity makes the need for standards-based interoperable metadata more important than ever. In addition to complexity, the nature of the metadata environment itself typically varies slightly from library to library making it difficult to recommend a single set of practices and procedures which would be releva...

  13. Interpreting the ASTM 'content standard for digital geospatial metadata'

    Science.gov (United States)

    Nebert, Douglas D.

    1996-01-01

    ASTM and the Federal Geographic Data Committee have developed a content standard for spatial metadata to facilitate documentation, discovery, and retrieval of digital spatial data using vendor-independent terminology. Spatial metadata elements are identifiable quality and content characteristics of a data set that can be tied to a geographic location or area. Several Office of Management and Budget Circulars and initiatives have been issued that specify improved cataloguing of and accessibility to federal data holdings. An Executive Order further requires the use of the metadata content standard to document digital spatial data sets. Collection and reporting of spatial metadata for field investigations performed for the federal government is an anticipated requirement. This paper provides an overview of the draft spatial metadata content standard and a description of how the standard could be applied to investigations collecting spatially-referenced field data.

  14. Making the Case for Embedded Metadata in Digital Images

    DEFF Research Database (Denmark)

    Smith, Kari R.; Saunders, Sarah; Kejser, U.B.

    2014-01-01

    exchange in heritage institutions and the culture sector. Our examples and findings support the case for embedded metadata in digital images and the opportunities for such use more broadly in non-heritage sectors as well. We encourage the adoption of embedded metadata by digital image content creators......This paper discusses the standards, methods, use cases, and opportunities for using embedded metadata in digital images. In this paper we explain the past and current work engaged with developing specifications, standards for embedding metadata of different types, and the practicalities of data...... and curators as well as those developing software and hardware that support the creation or re-use of digital images. We conclude that the usability of born digital images as well as physical objects that are digitized can be extended and the files preserved more readily with embedded metadata....

  15. Department of the Interior metadata implementation guide—Framework for developing the metadata component for data resource management

    Science.gov (United States)

    Obuch, Raymond C.; Carlino, Jennifer; Zhang, Lin; Blythe, Jonathan; Dietrich, Christopher; Hawkinson, Christine

    2018-04-12

    The Department of the Interior (DOI) is a Federal agency with over 90,000 employees across 10 bureaus and 8 agency offices. Its primary mission is to protect and manage the Nation’s natural resources and cultural heritage; provide scientific and other information about those resources; and honor its trust responsibilities or special commitments to American Indians, Alaska Natives, and affiliated island communities. Data and information are critical in day-to-day operational decision making and scientific research. DOI is committed to creating, documenting, managing, and sharing high-quality data and metadata in and across its various programs that support its mission. Documenting data through metadata is essential in realizing the value of data as an enterprise asset. The completeness, consistency, and timeliness of metadata affect users’ ability to search for and discover the most relevant data for the intended purpose; and facilitates the interoperability and usability of these data among DOI bureaus and offices. Fully documented metadata describe data usability, quality, accuracy, provenance, and meaning.Across DOI, there are different maturity levels and phases of information and metadata management implementations. The Department has organized a committee consisting of bureau-level points-of-contacts to collaborate on the development of more consistent, standardized, and more effective metadata management practices and guidance to support this shared mission and the information needs of the Department. DOI’s metadata implementation plans establish key roles and responsibilities associated with metadata management processes, procedures, and a series of actions defined in three major metadata implementation phases including: (1) Getting started—Planning Phase, (2) Implementing and Maintaining Operational Metadata Management Phase, and (3) the Next Steps towards Improving Metadata Management Phase. DOI’s phased approach for metadata management addresses

  16. Detection of Residual Levels and Associated Health Risk of Seven Pesticides in Fresh Eggplant and Tomato Samples from Narayanganj District, Bangladesh

    Directory of Open Access Journals (Sweden)

    Md. Nur Alam

    2015-01-01

    Full Text Available Residual levels of seven frequently used pesticides were investigated in 140 samples of two common vegetables, eggplants and tomatoes, from agricultural fields in the Narayanganj district of Bangladesh. The analysis of pesticide residues was performed by high-performance liquid chromatography with photodiode array detection. A large percentage of the eggplants (50% and tomatoes (60% from the Narayanganj district were contaminated with pesticides, and all of the levels were above the maximum residual limit (MRL proposed by the EC regulation. Diazinon was the most common (35% pesticide detected in the vegetable samples at a concentration of 45–450 times higher than the MRL. The health risk index for diazinon was highest for both eggplant and tomato samples, which may be due to its physiochemical properties. Fenitrothion and linuron are the two second most common types of pesticides detected in the vegetable samples. Regular monitoring of the use of common pesticides on vegetables should be conducted.

  17. Fluorescence hyper-spectral imaging to detecting faecal contamination on fresh tomatoes

    Directory of Open Access Journals (Sweden)

    Roberto Romaniello

    2016-03-01

    Full Text Available Faecal contamination of fresh fruits represents a severe danger for human health. Thus some techniques based on microbiological testing were developed to individuate faecal contaminants but those tests do not results efficient because their non-applicability on overall vegetable unity. In this work a methodology based on hyper-spectral fluorescence imaging was developed and tested to detecting faecal contamination on fresh tomatoes. Two image-processing methods were performed to maximise the contrast between the faecal contaminant and tomatoes skin: principal component analysis and band image ratio (BRI. The BRI method allows classifying correctly 70% of contaminated area, with no false-positives in all examined cases. Thus, the developed methodology can be employed for a fast and effective detection of faecal contamination on fresh tomatoes.

  18. Hormones and tomato seed germination

    NARCIS (Netherlands)

    Liu, Y.

    1996-01-01

    Using GA- and ABA-deficient mutants, exogenous gibberellins (GAs), abscisic acid (ABA) and osmoticum, we studied the roles of GAs and ABA in the induction of cell cycle activities, internal free space formation and changes in water relations during seed development and imbibition in tomato. First of

  19. Biochemical characteristics of mutant lines of currant tomato

    International Nuclear Information System (INIS)

    Gorbatenko, I.Yu.; Khrustaleva, V.V.; Shcherbakov, V.K.

    1988-01-01

    The currant tomato is used in breeding for fruit quality. It contains up to 50 mg% ascorbic acid, a large quantity of sugar and 8-10% of dry matter. The weight of the fruit, however, does not exceed 1.2-1.5 g. The plants have long, spreading and very branchy stems. Gamma ray induced mutants of currant tomato were used, as initial material in breeding for fruit quality in varieties suitable for mechanized harvesting. The research was carried out mainly at the Department of Vegetable Growing Ukrainian Scientific Research Institute of Irrigation Farming. The regional variety Lebyazhinskij (suitable for mechanized harvesting) was adopted as the standard. Its fruits contain: 5.6% dry matter, 2.7% sugars, 0.543% titrated acidity, 26.6 mg/100 g ascorbic acid, 0.425 mg% carotene and 0.35% cellulose. The biochemical characteristics of the tomato mutants are shown. In terms of fruit dry matter, all mutants surpassed the standard. The acidity and the ascorbic acid content varied considerably. Most noteworthy in terms of carotene were the lines GP-5, GP-9 and GP-12. An important factor in the production of tomato paste is the fruit cellulose content. The lowest cellulose content is found in mutant GP-3. As shown, all of the mutants were early ripening. The mutants surpassed the standard in simultaneous fruit ripening. Mutant lines GP-3, GP-6, GP-9 and GP-12 will be used in the breeding programme for improving fruit quality of varieties suitable for mechanized harvesting

  20. The XML Metadata Editor of GFZ Data Services

    Science.gov (United States)

    Ulbricht, Damian; Elger, Kirsten; Tesei, Telemaco; Trippanera, Daniele

    2017-04-01

    Following the FAIR data principles, research data should be Findable, Accessible, Interoperable and Reuseable. Publishing data under these principles requires to assign persistent identifiers to the data and to generate rich machine-actionable metadata. To increase the interoperability, metadata should include shared vocabularies and crosslink the newly published (meta)data and related material. However, structured metadata formats tend to be complex and are not intended to be generated by individual scientists. Software solutions are needed that support scientists in providing metadata describing their data. To facilitate data publication activities of 'GFZ Data Services', we programmed an XML metadata editor that assists scientists to create metadata in different schemata popular in the earth sciences (ISO19115, DIF, DataCite), while being at the same time usable by and understandable for scientists. Emphasis is placed on removing barriers, in particular the editor is publicly available on the internet without registration [1] and the scientists are not requested to provide information that may be generated automatically (e.g. the URL of a specific licence or the contact information of the metadata distributor). Metadata are stored in browser cookies and a copy can be saved to the local hard disk. To improve usability, form fields are translated into the scientific language, e.g. 'creators' of the DataCite schema are called 'authors'. To assist filling in the form, we make use of drop down menus for small vocabulary lists and offer a search facility for large thesauri. Explanations to form fields and definitions of vocabulary terms are provided in pop-up windows and a full documentation is available for download via the help menu. In addition, multiple geospatial references can be entered via an interactive mapping tool, which helps to minimize problems with different conventions to provide latitudes and longitudes. Currently, we are extending the metadata editor

  1. Taxonomic names, metadata, and the Semantic Web

    Directory of Open Access Journals (Sweden)

    Roderic D. M. Page

    2006-01-01

    Full Text Available Life Science Identifiers (LSIDs offer an attractive solution to the problem of globally unique identifiers for digital objects in biology. However, I suggest that in the context of taxonomic names, the most compelling benefit of adopting these identifiers comes from the metadata associated with each LSID. By using existing vocabularies wherever possible, and using a simple vocabulary for taxonomy-specific concepts we can quickly capture the essential information about a taxonomic name in the Resource Description Framework (RDF format. This opens up the prospect of using technologies developed for the Semantic Web to add ``taxonomic intelligence" to biodiversity databases. This essay explores some of these ideas in the context of providing a taxonomic framework for the phylogenetic database TreeBASE.

  2. Evolution of the ATLAS Metadata Interface (AMI)

    CERN Document Server

    Odier, Jerome; The ATLAS collaboration; Fulachier, Jerome; Lambert, Fabian

    2015-01-01

    The ATLAS Metadata Interface (AMI) can be considered to be a mature application because it has existed for at least 10 years. Over the years, the number of users and the number of functions provided for these users has increased. It has been necessary to adapt the hardware infrastructure in a seamless way so that the Quality of Service remains high. We will describe the evolution of the application from the initial one, using single server with a MySQL backend database, to the current state, where we use a cluster of Virtual Machines on the French Tier 1 Cloud at Lyon, an ORACLE database backend also at Lyon, with replication to CERN using ORACLE streams behind a back-up server.

  3. Potential of Pseudomonas putida PCI2 for the Protection of Tomato Plants Against Fungal Pathogens.

    Science.gov (United States)

    Pastor, Nicolás; Masciarelli, Oscar; Fischer, Sonia; Luna, Virginia; Rovera, Marisa

    2016-09-01

    Tomato is one of the most economically attractive vegetable crops due to its high yields. Diseases cause significant losses in tomato production worldwide. We carried out Polymerase Chain Reaction studies to detect the presence of genes encoding antifungal compounds in the DNA of Pseudomonas putida strain PCI2. We also used liquid chromatography-electrospray tandem mass spectrometry to detect and quantify the production of compounds that increase the resistance of plants to diseases from culture supernatants of PCI2. In addition, we investigated the presence of 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase in PCI2. Finally, PCI2 was used for inoculation of tomato seeds to study its potential biocontrol activity against Fusarium oxysporum MR193. The obtained results showed that no fragments for the encoding genes of hydrogen cyanide, pyoluteorin, 2,4-diacetylphloroglucinol, pyrrolnitrin, or phenazine-1-carboxylic acid were amplified from the DNA of PCI2. On the other hand, PCI2 produced salicylic acid and jasmonic acid in Luria-Bertani medium and grew in a culture medium containing ACC as the sole nitrogen source. We observed a reduction in disease incidence from 53.33 % in the pathogen control to 30 % in tomato plants pre-inoculated with PCI2 as well as increases in shoot and root dry weights in inoculated plants, as compared to the pathogenicity control. This study suggests that inoculation of tomato seeds with P. putida PCI2 increases the resistance of plants to root rot caused by F. oxysporum and that PCI2 produces compounds that may be involved at different levels in increasing such resistance. Thus, PCI2 could represent a non-contaminating management strategy potentially applicable in vegetable crops such as tomato.

  4. Effect of Dry Season Tomato Farming on Poverty Alleviation among ...

    African Journals Online (AJOL)

    Effect of Dry Season Tomato Farming on Poverty Alleviation among Women ... their major sources of resources for tomato farming, marketing and marketing ... and the effect of dry season tomato farming as strategy for poverty reduction; ...

  5. Semantic Metadata for Heterogeneous Spatial Planning Documents

    Science.gov (United States)

    Iwaniak, A.; Kaczmarek, I.; Łukowicz, J.; Strzelecki, M.; Coetzee, S.; Paluszyński, W.

    2016-09-01

    Spatial planning documents contain information about the principles and rights of land use in different zones of a local authority. They are the basis for administrative decision making in support of sustainable development. In Poland these documents are published on the Web according to a prescribed non-extendable XML schema, designed for optimum presentation to humans in HTML web pages. There is no document standard, and limited functionality exists for adding references to external resources. The text in these documents is discoverable and searchable by general-purpose web search engines, but the semantics of the content cannot be discovered or queried. The spatial information in these documents is geographically referenced but not machine-readable. Major manual efforts are required to integrate such heterogeneous spatial planning documents from various local authorities for analysis, scenario planning and decision support. This article presents results of an implementation using machine-readable semantic metadata to identify relationships among regulations in the text, spatial objects in the drawings and links to external resources. A spatial planning ontology was used to annotate different sections of spatial planning documents with semantic metadata in the Resource Description Framework in Attributes (RDFa). The semantic interpretation of the content, links between document elements and links to external resources were embedded in XHTML pages. An example and use case from the spatial planning domain in Poland is presented to evaluate its efficiency and applicability. The solution enables the automated integration of spatial planning documents from multiple local authorities to assist decision makers with understanding and interpreting spatial planning information. The approach is equally applicable to legal documents from other countries and domains, such as cultural heritage and environmental management.

  6. SEMANTIC METADATA FOR HETEROGENEOUS SPATIAL PLANNING DOCUMENTS

    Directory of Open Access Journals (Sweden)

    A. Iwaniak

    2016-09-01

    Full Text Available Spatial planning documents contain information about the principles and rights of land use in different zones of a local authority. They are the basis for administrative decision making in support of sustainable development. In Poland these documents are published on the Web according to a prescribed non-extendable XML schema, designed for optimum presentation to humans in HTML web pages. There is no document standard, and limited functionality exists for adding references to external resources. The text in these documents is discoverable and searchable by general-purpose web search engines, but the semantics of the content cannot be discovered or queried. The spatial information in these documents is geographically referenced but not machine-readable. Major manual efforts are required to integrate such heterogeneous spatial planning documents from various local authorities for analysis, scenario planning and decision support. This article presents results of an implementation using machine-readable semantic metadata to identify relationships among regulations in the text, spatial objects in the drawings and links to external resources. A spatial planning ontology was used to annotate different sections of spatial planning documents with semantic metadata in the Resource Description Framework in Attributes (RDFa. The semantic interpretation of the content, links between document elements and links to external resources were embedded in XHTML pages. An example and use case from the spatial planning domain in Poland is presented to evaluate its efficiency and applicability. The solution enables the automated integration of spatial planning documents from multiple local authorities to assist decision makers with understanding and interpreting spatial planning information. The approach is equally applicable to legal documents from other countries and domains, such as cultural heritage and environmental management.

  7. The tomato sauce making process affects the bioaccessibility and bioavailability of tomato phenolics: a pharmacokinetic study.

    Science.gov (United States)

    Martínez-Huélamo, Miriam; Tulipani, Sara; Estruch, Ramón; Escribano, Elvira; Illán, Montserrat; Corella, Dolores; Lamuela-Raventós, Rosa M

    2015-04-15

    Tomato sauce is the most commonly consumed processed tomato product worldwide, but very little is known about how the manufacturing process may affect the phenolic composition and bioavailability after consumption. In a prospective randomised, cross-over intervention study, we analysed the plasma and urinary levels of tomato phenolic compounds and their metabolites after acute consumption of raw tomatoes and tomato sauce, enriched or not with refined olive oil during production. Respectively, eleven and four phenolic metabolites were found in urine and plasma samples. The plasma concentration and urinary excretion of naringenin glucuronide were both significantly higher after the consumption of tomato sauce than raw tomatoes. The results suggest that the mechanical and thermal treatments during tomato sauce manufacture may help to deliver these potentially bioactive phenolics from the food matrix more effectively than the addition of an oil component, thus increasing their bioavailability. Copyright © 2014 Elsevier Ltd. All rights reserved.

  8. Bacterial community diversity and variation in spray water sources and the tomato fruit surface.

    Science.gov (United States)

    Telias, Adriana; White, James R; Pahl, Donna M; Ottesen, Andrea R; Walsh, Christopher S

    2011-04-21

    Tomato (Solanum lycopersicum) consumption has been one of the most common causes of produce-associated salmonellosis in the United States. Contamination may originate from animal waste, insects, soil or water. Current guidelines for fresh tomato production recommend the use of potable water for applications coming in direct contact with the fruit, but due to high demand, water from other sources is frequently used. We sought to describe the overall bacterial diversity on the surface of tomato fruit and the effect of two different water sources (ground and surface water) when used for direct crop applications by generating a 454-pyrosequencing 16S rRNA dataset of these different environments. This study represents the first in depth characterization of bacterial communities in the tomato fruit surface and the water sources commonly used in commercial vegetable production. The two water sources tested had a significantly different bacterial composition. Proteobacteria was predominant in groundwater samples, whereas in the significantly more diverse surface water, abundant phyla also included Firmicutes, Actinobacteria and Verrucomicrobia. The fruit surface bacterial communities on tomatoes sprayed with both water sources could not be differentiated using various statistical methods. Both fruit surface environments had a high representation of Gammaproteobacteria, and within this class the genera Pantoea and Enterobacter were the most abundant. Despite the major differences observed in the bacterial composition of ground and surface water, the season long use of these very different water sources did not have a significant impact on the bacterial composition of the tomato fruit surface. This study has provided the first next-generation sequencing database describing the bacterial communities living in the fruit surface of a tomato crop under two different spray water regimes, and therefore represents an important step forward towards the development of science

  9. Bacterial community diversity and variation in spray water sources and the tomato fruit surface

    Directory of Open Access Journals (Sweden)

    Ottesen Andrea R

    2011-04-01

    Full Text Available Abstract Background Tomato (Solanum lycopersicum consumption has been one of the most common causes of produce-associated salmonellosis in the United States. Contamination may originate from animal waste, insects, soil or water. Current guidelines for fresh tomato production recommend the use of potable water for applications coming in direct contact with the fruit, but due to high demand, water from other sources is frequently used. We sought to describe the overall bacterial diversity on the surface of tomato fruit and the effect of two different water sources (ground and surface water when used for direct crop applications by generating a 454-pyrosequencing 16S rRNA dataset of these different environments. This study represents the first in depth characterization of bacterial communities in the tomato fruit surface and the water sources commonly used in commercial vegetable production. Results The two water sources tested had a significantly different bacterial composition. Proteobacteria was predominant in groundwater samples, whereas in the significantly more diverse surface water, abundant phyla also included Firmicutes, Actinobacteria and Verrucomicrobia. The fruit surface bacterial communities on tomatoes sprayed with both water sources could not be differentiated using various statistical methods. Both fruit surface environments had a high representation of Gammaproteobacteria, and within this class the genera Pantoea and Enterobacter were the most abundant. Conclusions Despite the major differences observed in the bacterial composition of ground and surface water, the season long use of these very different water sources did not have a significant impact on the bacterial composition of the tomato fruit surface. This study has provided the first next-generation sequencing database describing the bacterial communities living in the fruit surface of a tomato crop under two different spray water regimes, and therefore represents an

  10. Design and Implementation of a Metadata-rich File System

    Energy Technology Data Exchange (ETDEWEB)

    Ames, S; Gokhale, M B; Maltzahn, C

    2010-01-19

    Despite continual improvements in the performance and reliability of large scale file systems, the management of user-defined file system metadata has changed little in the past decade. The mismatch between the size and complexity of large scale data stores and their ability to organize and query their metadata has led to a de facto standard in which raw data is stored in traditional file systems, while related, application-specific metadata is stored in relational databases. This separation of data and semantic metadata requires considerable effort to maintain consistency and can result in complex, slow, and inflexible system operation. To address these problems, we have developed the Quasar File System (QFS), a metadata-rich file system in which files, user-defined attributes, and file relationships are all first class objects. In contrast to hierarchical file systems and relational databases, QFS defines a graph data model composed of files and their relationships. QFS incorporates Quasar, an XPATH-extended query language for searching the file system. Results from our QFS prototype show the effectiveness of this approach. Compared to the de facto standard, the QFS prototype shows superior ingest performance and comparable query performance on user metadata-intensive operations and superior performance on normal file metadata operations.

  11. Screening of tomato varieties for fruit tree based Agroforestry system

    OpenAIRE

    J. Hossain

    2014-01-01

    An experiment was conducted with four tomato varieties under a six year old orchard was accomplished at the Bangabandhu Sheikh Mujibur Rahman Agricultural University (BSMRAU) research farm during October 2011 to April 2012. The experiment was laid out in a Randomized Complete Block Design with three replications. Four tomato varieties (BARI Tomato 2, BARI Tomato 8, BARI Tomato 14 and BARI Tomato 15) were grown under guava, mango, olive and control. Results showed that light availability in co...

  12. Metadata Creation, Management and Search System for your Scientific Data

    Science.gov (United States)

    Devarakonda, R.; Palanisamy, G.

    2012-12-01

    Mercury Search Systems is a set of tools for creating, searching, and retrieving of biogeochemical metadata. Mercury toolset provides orders of magnitude improvements in search speed, support for any metadata format, integration with Google Maps for spatial queries, multi-facetted type search, search suggestions, support for RSS (Really Simple Syndication) delivery of search results, and enhanced customization to meet the needs of the multiple projects that use Mercury. Mercury's metadata editor provides a easy way for creating metadata and Mercury's search interface provides a single portal to search for data and information contained in disparate data management systems, each of which may use any metadata format including FGDC, ISO-19115, Dublin-Core, Darwin-Core, DIF, ECHO, and EML. Mercury harvests metadata and key data from contributing project servers distributed around the world and builds a centralized index. The search interfaces then allow the users to perform a variety of fielded, spatial, and temporal searches across these metadata sources. This centralized repository of metadata with distributed data sources provides extremely fast search results to the user, while allowing data providers to advertise the availability of their data and maintain complete control and ownership of that data. Mercury is being used more than 14 different projects across 4 federal agencies. It was originally developed for NASA, with continuing development funded by NASA, USGS, and DOE for a consortium of projects. Mercury search won the NASA's Earth Science Data Systems Software Reuse Award in 2008. References: R. Devarakonda, G. Palanisamy, B.E. Wilson, and J.M. Green, "Mercury: reusable metadata management data discovery and access system", Earth Science Informatics, vol. 3, no. 1, pp. 87-94, May 2010. R. Devarakonda, G. Palanisamy, J.M. Green, B.E. Wilson, "Data sharing and retrieval using OAI-PMH", Earth Science Informatics DOI: 10.1007/s12145-010-0073-0, (2010);

  13. Desorption isotherms and mathematical modeling of thin layer drying kinetics of tomato

    Science.gov (United States)

    Belghith, Amira; Azzouz, Soufien; ElCafsi, Afif

    2016-03-01

    In recent years, there is an increased demand on the international market of dried fruits and vegetables with significant added value. Due to its important production, consumption and nutrient intake, drying of tomato has become a subject of extended and varied research works. The present work is focused on the drying behavior of thin-layer tomato and its mathematical modeling in order to optimize the drying processes. The moisture desorption isotherms of raw tomato were determined at four temperature levels namely 45, 50, 60 and 65 °C using the static gravimetric method. The experimental data obtained were modeled by five equations and the (GAB) model was found to be the best-describing these isotherms. The drying kinetics were experimentally investigated at 45, 55 and 65 °C and performed at air velocities of 0.5 and 2 m/s. In order to investigate the effect of the exchange surface on drying time, samples were dried into two different shapes: tomato halves and tomato quarters. The impact of various drying parameters was also studied (temperature, air velocity and air humidity). The drying curves showed only the preheating period and the falling drying rate period. In this study, attention was paid to the modeling of experimental thin-layer drying kinetics. The experimental results were fitted with four different models.

  14. The effect of water stress and salinity on growth and physiology of tomato (Lycopersicon esculentum Mil.

    Directory of Open Access Journals (Sweden)

    Giannakoula Anastasia E.

    2013-01-01

    Full Text Available Carotenoids like lycopene are important pigments found in photosynthetic pigment-protein complexes in plants. They are responsible for the bright colors of fruits and vegetables and perform various functions in photosynthesis. Our research has shown that the application of moderate salt stress on tomato plants can enhance lycopene and potentially other antioxidant concentrations in fruits. The increase in lycopene in response to salt stress in the tomato fruits varied from 20% to 80%. Although the specific biological mechanisms involved in increasing fruit lycopene deposition has not been clearly elucidated, evidence suggests that increasing antioxidant concentrations is a primary physiological response of the plant to salt stress. Additionally drought stress during cultivation increased the antioxidant capacity of tomato fruit while maintaining the lycopene concentration. In addition, the effects of silicium were investigated, added to the nutrient solution either at low concentration or at an increased concentration. The present study clearly indicates that an enhanced silicium supply to tomato increases markedly the lycopene contents, irrespective of the salinity status in the tomato fruit.

  15. Anti-atherosclerotic effects of tomatoes

    Directory of Open Access Journals (Sweden)

    Hidekatsu Yanai

    2017-06-01

    Full Text Available Tomatoes are rich in lycopene, which causes the red coloring of tomatoes. Several reports have suggested lycopene plays a role in the prevention of cardiovascular diseases. In this study, we systematically reviewed the interventional studies using tomatoes or tomato products to understandtheanti-atherosclerotic effects of the tomatoas a functional food. We found that a significantnumber of interventional studies reportedtheanti-atherosclerotic effects of tomatoes, includinganti-obesity effects, hypotensiveeffects, improvement of lipid/glucose metabolismand endothelial function, anti-oxidative and anti-inflammatory effect, and anti-platelet effect; however, the anti-platelet effect was disagreed uponby some studies. Furthermore, we discoveredcooking methods significantlyaffect anti-atherosclerotic effects of tomatoes.

  16. Improving Metadata Compliance for Earth Science Data Records

    Science.gov (United States)

    Armstrong, E. M.; Chang, O.; Foster, D.

    2014-12-01

    One of the recurring challenges of creating earth science data records is to ensure a consistent level of metadata compliance at the granule level where important details of contents, provenance, producer, and data references are necessary to obtain a sufficient level of understanding. These details are important not just for individual data consumers but also for autonomous software systems. Two of the most popular metadata standards at the granule level are the Climate and Forecast (CF) Metadata Conventions and the Attribute Conventions for Dataset Discovery (ACDD). Many data producers have implemented one or both of these models including the Group for High Resolution Sea Surface Temperature (GHRSST) for their global SST products and the Ocean Biology Processing Group for NASA ocean color and SST products. While both the CF and ACDD models contain various level of metadata richness, the actual "required" attributes are quite small in number. Metadata at the granule level becomes much more useful when recommended or optional attributes are implemented that document spatial and temporal ranges, lineage and provenance, sources, keywords, and references etc. In this presentation we report on a new open source tool to check the compliance of netCDF and HDF5 granules to the CF and ACCD metadata models. The tool, written in Python, was originally implemented to support metadata compliance for netCDF records as part of the NOAA's Integrated Ocean Observing System. It outputs standardized scoring for metadata compliance for both CF and ACDD, produces an objective summary weight, and can be implemented for remote records via OPeNDAP calls. Originally a command-line tool, we have extended it to provide a user-friendly web interface. Reports on metadata testing are grouped in hierarchies that make it easier to track flaws and inconsistencies in the record. We have also extended it to support explicit metadata structures and semantic syntax for the GHRSST project that can be

  17. Predicting the presence of whiteflies and tomato yellow leaf curl virus in Florida tomato fields

    Science.gov (United States)

    Florida is one of the leading states for production of fresh market tomatoes. Production is severely affected by Tomato yellow leaf curl virus (TYLCV). The objective of this study was to identify landscape and climatic factors that drive whitefly populations and TYLCV incidence in commercial tomato ...

  18. Tomato juices and tomato juice concentrates : a study of factors contributing to their gross viscosity

    NARCIS (Netherlands)

    Heutink, R.

    1986-01-01

    The gross viscosity of tomato juice and tomato juice concentrates was found to be determined primarily by the water insoluble solids (WIS) content. The serum viscosity did not contribute to gross viscosity. The WIS consisted of whole tomato cells, vascular bundles and skin fragments. In general the

  19. Effect of drought stress on growth, yield and seed quality of tomato (lycopersicon esculentum L.)

    International Nuclear Information System (INIS)

    Pervez, M.A.; Ayub, C.M.

    2009-01-01

    Plant growth is seriously affected by abiotic stresses such as drought, salinity or temperature. Drought is one of the most important limiting factors for agricultural crops and vegetable production in particular all around the world. Drought stress during vegetative or early reproductive growth usually reduces yield by reducing the number of seeds, seed size and seed quality. To assess the effect of drought stress on seed yield, seed quality and growth of tomato, the experiment was conducted in green house in plastic pots at Pen-y-Fridd field station, University of Wales, Bangor, U.K. during 2003-2004. Tomato cv. Moneymaker was used as a test crop. There were four treatments i.e. early stress (when first truss has set the fruits), middle stress (when fruits in first truss were fully matured and started changing their colour), late stress (when fruits on first truss were ripened fully), whereas in control no stress was imposed. Analysis of data regarding various attributes (fruit weight and shoot dry weight per plant, number of seeds per fruit, total number of seeds and seed weight per plant and vigour of seed) showed that drought stress had non-significant effect on vigour, quality and yield of tomato seed. Plant height, number of leaves and number of fruits per plant showed significant results toward drought stress signifying drought effects on growth of tomato. (author)

  20. The Effect of Washing and Peeling on Reduction of Dithiocarbamates Residues in Cucumber and Tomato

    Directory of Open Access Journals (Sweden)

    Mohammad Reza Mehrasebi

    2016-03-01

    Full Text Available Background: Dithiocarbamates, the main group of fungicides, are used to control about 400 pathogens in more than 70 crops. These pesticides are widely applied to crops including potato, cereal, apple, pear and leafy vegetables throughout the world since 1960. From the late 1980s, using these fungicides has caused much debate among regulators about their long-term effects on consumers and occupational users. Method: In this study the residues of Dithiocarbamates in cucumber and tomato using the colorimetric method (Keppel method was measured. Respectively 80 and 45 samples of greenhouse cucumber and tomato were collected from Zanjan vegetables center in autumns and winter 2013. The samples were analyzed in 4 treatments of: unwashed, washing with water, washing whit detergent and peeling. Result: The results showed that the average concentration of Dithiocarbamates residues in unwashed greenhouse cucumber and tomatoes were 384.5 µg/kg and 65 µg/kg respectively. 35% and 5% of unwashed and water washed cucumber and tomato samples (respectively had higher Dithiocarbamates residue than MRL recommended by Institute of Standards and Industrial Research of Iran (0.5mg/kg. Conclusion: The treatments of washing and peeling had significant effect on the reduction of Dithiocarbamates residues in the all samples.

  1. Tomato-based food products for prostate cancer prevention: what have we learned?

    Science.gov (United States)

    Tan, Hsueh-Li; Thomas-Ahner, Jennifer M; Grainger, Elizabeth M; Wan, Lei; Francis, David M; Schwartz, Steven J; Erdman, John W; Clinton, Steven K

    2010-09-01

    Evidence derived from a vast array of laboratory studies and epidemiological investigations have implicated diets rich in fruits and vegetables with a reduced risk of certain cancers. However, these approaches cannot demonstrate causal relationships and there is a paucity of randomized, controlled trials due to the difficulties involved with executing studies of food and behavioral change. Rather than pursuing the definitive intervention trials that are necessary, the thrust of research in recent decades has been driven by a reductionist approach focusing upon the identification of bioactive components in fruits and vegetables with the subsequent development of single agents using a pharmacologic approach. At this point in time, there are no chemopreventive strategies that are standard of care in medical practice that have resulted from this approach. This review describes an alternative approach focusing upon development of tomato-based food products for human clinical trials targeting cancer prevention and as an adjunct to therapy. Tomatoes are a source of bioactive phytochemicals and are widely consumed. The phytochemical pattern of tomato products can be manipulated to optimize anticancer activity through genetics, horticultural techniques, and food processing. The opportunity to develop a highly consistent tomato-based food product rich in anticancer phytochemicals for clinical trials targeting specific cancers, particularly the prostate, necessitates the interactive transdisciplinary research efforts of horticulturalists, food technologists, cancer biologists, and clinical translational investigators.

  2. Mutation breeding in vegetable crops

    Energy Technology Data Exchange (ETDEWEB)

    Yamaguchi, Takashi

    1984-03-01

    Vegetables breed by seeds and vegetative organs. In main vegetables, the differentiation of clopping types, the adoption of monoculture and year-round production and shipment are carried out, adapting to various socio-economic and cultivation conditions. Protected agriculture has advanced mainly for fruit vegetables, and the seeds for sale have become almost hybrid varieties. Reflecting this situation, the demand for breeding is diversified and characteristic. The present status of mutation breeding of vegetables is not yet well under way, but reports of about 40 raised varieties have been published in the world. The characters introduced by induced mutation and irradiation are compact form, harvesting aptitude, the forms and properties of stems and leaves, anti-lodging property, the size, form and uniformity of fruits, male sterility and so on. The radiation sources used were mostly gamma ray or X-ray, but sometimes, combined irradiation was used. Results obtained in Japan include: burdocks as an example to gamma ray irradiation of seeds; tomatoes as an example of inducing compound resistance against disease injury; and lettuce as an example of internal beta irradiation. (Kako, I.).

  3. Mutation breeding in vegetable crops

    International Nuclear Information System (INIS)

    Yamaguchi, Takashi

    1984-01-01

    Vegetables breed by seeds and vegetative organs. In main vegetables, the differentiation of clopping types, the adoption of monoculture and year-round production and shipment are carried out, adapting to various socio-economic and cultivation conditions. Protected agriculture has advanced mainly for fruit vegetables, and the seeds for sale have become almost hybrid varieties. Reflecting the situation like this, the demand for breeding is diversified and characteristic, and the case of applying mutation breeding seems to be many. The present status of the mutation breeding of vegetables is not yet well under way, but about 40 raised varieties have been published in the world. The characters introduced by induced mutation and irradiation were compact form, harvesting aptitude, the forms and properties of stems and leaves, anti-lodging property, the size, form and uniformity of fruits, male sterility and so on. The radiation sources used were mostly gamma ray or X-ray, but sometimes, combined irradiation was used. As the results obtained in Japan, burdocks as an example of gamma ray irradiation to seeds, tomatoes as an example of inducing the compound resistance against disease injury and lettuces as an example of internal beta irradiation are reported. (Kako, I.)

  4. Ontology-based Metadata Portal for Unified Semantics

    Data.gov (United States)

    National Aeronautics and Space Administration — The Ontology-based Metadata Portal for Unified Semantics (OlyMPUS) will extend the prototype Ontology-Driven Interactive Search Environment for Earth Sciences...

  5. Distributed metadata in a high performance computing environment

    Science.gov (United States)

    Bent, John M.; Faibish, Sorin; Zhang, Zhenhua; Liu, Xuezhao; Tang, Haiying

    2017-07-11

    A computer-executable method, system, and computer program product for managing meta-data in a distributed storage system, wherein the distributed storage system includes one or more burst buffers enabled to operate with a distributed key-value store, the co computer-executable method, system, and computer program product comprising receiving a request for meta-data associated with a block of data stored in a first burst buffer of the one or more burst buffers in the distributed storage system, wherein the meta data is associated with a key-value, determining which of the one or more burst buffers stores the requested metadata, and upon determination that a first burst buffer of the one or more burst buffers stores the requested metadata, locating the key-value in a portion of the distributed key-value store accessible from the first burst buffer.

  6. USGS 24k Digital Raster Graphic (DRG) Metadata

    Data.gov (United States)

    Minnesota Department of Natural Resources — Metadata for the scanned USGS 24k Topograpic Map Series (also known as 24k Digital Raster Graphic). Each scanned map is represented by a polygon in the layer and the...

  7. Metadata and Service at the GFZ ISDC Portal

    Science.gov (United States)

    Ritschel, B.

    2008-05-01

    The online service portal of the GFZ Potsdam Information System and Data Center (ISDC) is an access point for all manner of geoscientific geodata, its corresponding metadata, scientific documentation and software tools. At present almost 2000 national and international users and user groups have the opportunity to request Earth science data from a portfolio of 275 different products types and more than 20 Million single data files with an added volume of approximately 12 TByte. The majority of the data and information, the portal currently offers to the public, are global geomonitoring products such as satellite orbit and Earth gravity field data as well as geomagnetic and atmospheric data for the exploration. These products for Earths changing system are provided via state-of-the art retrieval techniques. The data product catalog system behind these techniques is based on the extensive usage of standardized metadata, which are describing the different geoscientific product types and data products in an uniform way. Where as all ISDC product types are specified by NASA's Directory Interchange Format (DIF), Version 9.0 Parent XML DIF metadata files, the individual data files are described by extended DIF metadata documents. Depending on the beginning of the scientific project, one part of data files are described by extended DIF, Version 6 metadata documents and the other part are specified by data Child XML DIF metadata documents. Both, the product type dependent parent DIF metadata documents and the data file dependent child DIF metadata documents are derived from a base-DIF.xsd xml schema file. The ISDC metadata philosophy defines a geoscientific product as a package consisting of mostly one or sometimes more than one data file plus one extended DIF metadata file. Because NASA's DIF metadata standard has been developed in order to specify a collection of data only, the extension of the DIF standard consists of new and specific attributes, which are necessary for

  8. Phloem unloading in tomato fruit

    International Nuclear Information System (INIS)

    Damon, S.; Hewitt, J.; Bennett, A.B.

    1986-01-01

    To begin to identify those processes that contribute to the regulation of photosynthate partitioning in tomato fruit the path of phloem unloading in this tissue has been characterized. Assymetrically labelled sucrose ( 3 H-fructosyl sucrose) was applied to source leaves. Following translocation to the fruit the apoplast was sampled. The appearance of assymetric sucrose and 3 H-fructose in the apoplast indicates that phloem unloading is apoplastic and that extracellular invertase is active. Estimation of sucrose, glucose, and fructose concentrations in the apoplast were 1 mM, 40 mM, and 40 mM, respectively. Rates of uptake of sucrose, 1-fluorosucrose, glucose, and fructose across the plasma membrane were similar and non-saturating at physiological concentrations. These results suggest that, although extracellular invertase is present, sucrose hydrolysis is not required for uptake into tomato fruit pericarp cells. 1-fluorosucrose is used to investigate the role of sucrose synthase in hydrolysis of imported photosynthate

  9. Trade Performance of Fruit and Vegetable Industry in Selected ASEAN Countries

    OpenAIRE

    Emmy, F.A.; Mohd Mansor, Ismail

    2009-01-01

    This paper examines the trade performance for thirteen commodities in the fruit and vegetable industry in relation to that of selected ASEAN countries (Philippines, Indonesia, Singapore and Thailand), based on Revealed Comparative Advantage (RCA) indicator. The analysis shows that Singapore has comparative advantage in 5 commodities (ground-nuts, hazelnuts, plums, apricots and walnuts), Philippines has comparative advantage in 3 commodities (tomatoes nes prepared or preserved, tomatoes whole ...

  10. Preplanting irradiation of tomato seeds

    International Nuclear Information System (INIS)

    Maltseva, S.

    1976-01-01

    Seeds of the tomato varieties Pioneer-2, Drouzhba and Ace were treated prior to planting with Co 60 gamma rays in optimal doses of 2000 R and the varieties No 10 x Bison, Triumph and Extase with 1500 R. This treatment raised the germination energy and the plants started flowering and ripening earlier. The index of earliness was enhanced but the overall yield was equal to that of the control plants. (author)

  11. The Use of Metadata Visualisation Assist Information Retrieval

    Science.gov (United States)

    2007-10-01

    album title, the track length and the genre of music . Again, any of these pieces of information can be used to quickly search and locate specific...that person. Music files also have metadata tags, in a format called ID3. This usually contains information such as the artist, the song title, the...tracks, to provide more information about the entire music collection, or to find similar or diverse tracks within the collection. Metadata is

  12. Dealing with metadata quality: the legacy of digital library efforts

    OpenAIRE

    Tani, Alice; Candela, Leonardo; Castelli, Donatella

    2013-01-01

    In this work, we elaborate on the meaning of metadata quality by surveying efforts and experiences matured in the digital library domain. In particular, an overview of the frameworks developed to characterize such a multi-faceted concept is presented. Moreover, the most common quality-related problems affecting metadata both during the creation and the aggregation phase are discussed together with the approaches, technologies and tools developed to mitigate them. This survey on digital librar...

  13. Characterization and quantification of phenolic compounds in four tomato (Lycopersicon esculentum L.) farmers' varieties in northeastern Portugal homegardens.

    Science.gov (United States)

    Barros, Lillian; Dueñas, Montserrat; Pinela, José; Carvalho, Ana Maria; Buelga, Celestino Santos; Ferreira, Isabel C F R

    2012-09-01

    Tomato (Lycopersicon esculentum L.) is one of the most widely consumed fresh and processed vegetables in the world, and contains bioactive key components. Phenolic compounds are one of those components and, according to the present study, farmers' varieties of tomato cultivated in homegardens from the northeastern Portuguese region are a source of phenolic compounds, mainly phenolic acid derivatives. Using HPLC-DAD-ESI/MS, it was concluded that a cis p-coumaric acid derivative was the most abundant compound in yellow (Amarelo) and round (Batateiro) tomato varieties, while 4-O-caffeolyquinic acid was the most abundant in long (Comprido) and heart (Coração) varieties. The most abundant flavonoid was quercetin pentosylrutinoside in the four tomato varieties. Yellow tomato presented the highest levels of phenolic compounds (54.23 μg/g fw), including phenolic acids (43.30 μg/g fw) and flavonoids (10.93 μg/g fw). The phenolic compounds profile obtained for the studied varieties is different from other tomato varieties available in different countries, which is certainly related to genetic features, cultivation conditions, and handling and storage methods associated to each sample.

  14. Generation of gamma irradiation and EMS-induced mutant lines of the H7996 tomato (Solanum lycopersicum L.)

    International Nuclear Information System (INIS)

    Canama, Alma O.; Galvez, Hayde F.; Tongson, Eden Jane U.; Quilloy, Reynaldo B.; Hautea, Desiree M.

    2010-01-01

    Tomato (L.) is one of the most important vegetable crops grown worldwide for the fresh vegetable market and food processing industry. With the completion of the genome-sequencing projects in various crops, the major challenge will be determine the gene function. One approach is to generate and to analyze mutant phenotypes. The paper reports the generation of gamma-irradiated and ethy methane sulfonate (EMS)-treated mutant populations, identification and phenotypic characterization of dominant and visible mutations in tomato mutant lines. Mutant populations of tomato H7996 were created using physical (cobalt 60 gamma ray) and chemical EMS mutagens. Generally, based on high-throughput phenotypic characterization, mutations were observed on the plant habit, size, morphology, leaf and flower color and morphology and fruit characteristics. Specifically, the most common dominant and visible mutations noted in the M 1 generation were monopodial, compact, short internodes, multi-branch plant type, light yellow and ghost leaf coloration, tiny and long pedicel leaf morphology and small or short plant size. In the M2 generation, homogeneous and segregating M 2 families were selected to constitute the core set of visible tomato mutants. Initial bacterial wilt resistance (BWR) gene knockouts were also identified. The mutant lines will be used as a rich source of genetic materials for breeding and functional genomics of tomato. (author)

  15. Forensic devices for activism: Metadata tracking and public proof

    Directory of Open Access Journals (Sweden)

    Lonneke van der Velden

    2015-10-01

    Full Text Available The central topic of this paper is a mobile phone application, ‘InformaCam’, which turns metadata from a surveillance risk into a method for the production of public proof. InformaCam allows one to manage and delete metadata from images and videos in order to diminish surveillance risks related to online tracking. Furthermore, it structures and stores the metadata in such a way that the documentary material becomes better accommodated to evidentiary settings, if needed. In this paper I propose InformaCam should be interpreted as a ‘forensic device’. By using the conceptualization of forensics and work on socio-technical devices the paper discusses how InformaCam, through a range of interventions, rearranges metadata into a technology of evidence. InformaCam explicitly recognizes mobile phones as context aware, uses their sensors, and structures metadata in order to facilitate data analysis after images are captured. Through these modifications it invents a form of ‘sensory data forensics'. By treating data in this particular way, surveillance resistance does more than seeking awareness. It becomes engaged with investigatory practices. Considering the extent by which states conduct metadata surveillance, the project can be seen as a timely response to the unequal distribution of power over data.

  16. A Metadata Schema for Geospatial Resource Discovery Use Cases

    Directory of Open Access Journals (Sweden)

    Darren Hardy

    2014-07-01

    Full Text Available We introduce a metadata schema that focuses on GIS discovery use cases for patrons in a research library setting. Text search, faceted refinement, and spatial search and relevancy are among GeoBlacklight's primary use cases for federated geospatial holdings. The schema supports a variety of GIS data types and enables contextual, collection-oriented discovery applications as well as traditional portal applications. One key limitation of GIS resource discovery is the general lack of normative metadata practices, which has led to a proliferation of metadata schemas and duplicate records. The ISO 19115/19139 and FGDC standards specify metadata formats, but are intricate, lengthy, and not focused on discovery. Moreover, they require sophisticated authoring environments and cataloging expertise. Geographic metadata standards target preservation and quality measure use cases, but they do not provide for simple inter-institutional sharing of metadata for discovery use cases. To this end, our schema reuses elements from Dublin Core and GeoRSS to leverage their normative semantics, community best practices, open-source software implementations, and extensive examples already deployed in discovery contexts such as web search and mapping. Finally, we discuss a Solr implementation of the schema using a "geo" extension to MODS.

  17. Using Metadata to Build Geographic Information Sharing Environment on Internet

    Directory of Open Access Journals (Sweden)

    Chih-hong Sun

    1999-12-01

    Full Text Available Internet provides a convenient environment to share geographic information. Web GIS (Geographic Information System even provides users a direct access environment to geographic databases through Internet. However, the complexity of geographic data makes it difficult for users to understand the real content and the limitation of geographic information. In some cases, users may misuse the geographic data and make wrong decisions. Meanwhile, geographic data are distributed across various government agencies, academic institutes, and private organizations, which make it even more difficult for users to fully understand the content of these complex data. To overcome these difficulties, this research uses metadata as a guiding mechanism for users to fully understand the content and the limitation of geographic data. We introduce three metadata standards commonly used for geographic data and metadata authoring tools available in the US. We also review the current development of geographic metadata standard in Taiwan. Two metadata authoring tools are developed in this research, which will enable users to build their own geographic metadata easily.[Article content in Chinese

  18. Automated metadata--final project report

    International Nuclear Information System (INIS)

    Schissel, David

    2016-01-01

    This report summarizes the work of the Automated Metadata, Provenance Cataloging, and Navigable Interfaces: Ensuring the Usefulness of Extreme-Scale Data Project (MPO Project) funded by the United States Department of Energy (DOE), Offices of Advanced Scientific Computing Research and Fusion Energy Sciences. Initially funded for three years starting in 2012, it was extended for 6 months with additional funding. The project was a collaboration between scientists at General Atomics, Lawrence Berkley National Laboratory (LBNL), and Massachusetts Institute of Technology (MIT). The group leveraged existing computer science technology where possible, and extended or created new capabilities where required. The MPO project was able to successfully create a suite of software tools that can be used by a scientific community to automatically document their scientific workflows. These tools were integrated into workflows for fusion energy and climate research illustrating the general applicability of the project's toolkit. Feedback was very positive on the project's toolkit and the value of such automatic workflow documentation to the scientific endeavor.

  19. Automated metadata--final project report

    Energy Technology Data Exchange (ETDEWEB)

    Schissel, David [General Atomics, San Diego, CA (United States)

    2016-04-01

    This report summarizes the work of the Automated Metadata, Provenance Cataloging, and Navigable Interfaces: Ensuring the Usefulness of Extreme-Scale Data Project (MPO Project) funded by the United States Department of Energy (DOE), Offices of Advanced Scientific Computing Research and Fusion Energy Sciences. Initially funded for three years starting in 2012, it was extended for 6 months with additional funding. The project was a collaboration between scientists at General Atomics, Lawrence Berkley National Laboratory (LBNL), and Massachusetts Institute of Technology (MIT). The group leveraged existing computer science technology where possible, and extended or created new capabilities where required. The MPO project was able to successfully create a suite of software tools that can be used by a scientific community to automatically document their scientific workflows. These tools were integrated into workflows for fusion energy and climate research illustrating the general applicability of the project’s toolkit. Feedback was very positive on the project’s toolkit and the value of such automatic workflow documentation to the scientific endeavor.

  20. Educational Rationale Metadata for Learning Objects

    Directory of Open Access Journals (Sweden)

    Tom Carey

    2002-10-01

    Full Text Available Instructors searching for learning objects in online repositories will be guided in their choices by the content of the object, the characteristics of the learners addressed, and the learning process embodied in the object. We report here on a feasibility study for metadata to record process-oriented information about instructional approaches for learning objects, though a set of Educational Rationale [ER] tags which would allow authors to describe the critical elements in their design intent. The prototype ER tags describe activities which have been demonstrated to be of value in learning, and authors select the activities whose support was critical in their design decisions. The prototype ER tag set consists descriptors of the instructional approach used in the design, plus optional sub-elements for Comments, Importance and Features which implement the design intent. The tag set was tested by creators of four learning object modules, three intended for post-secondary learners and one for K-12 students and their families. In each case the creators reported that the ER tag set allowed them to express succinctly the key instructional approaches embedded in their designs. These results confirmed the overall feasibility of the ER tag approach as a means of capturing design intent from creators of learning objects. Much work remains to be done before a usable ER tag set could be specified, including evaluating the impact of ER tags during design to improve instructional quality of learning objects.

  1. Evolving Metadata in NASA Earth Science Data Systems

    Science.gov (United States)

    Mitchell, A.; Cechini, M. F.; Walter, J.

    2011-12-01

    NASA's Earth Observing System (EOS) is a coordinated series of satellites for long term global observations. NASA's Earth Observing System Data and Information System (EOSDIS) is a petabyte-scale archive of environmental data that supports global climate change research by providing end-to-end services from EOS instrument data collection to science data processing to full access to EOS and other earth science data. On a daily basis, the EOSDIS ingests, processes, archives and distributes over 3 terabytes of data from NASA's Earth Science missions representing over 3500 data products ranging from various types of science disciplines. EOSDIS is currently comprised of 12 discipline specific data centers that are collocated with centers of science discipline expertise. Metadata is used in all aspects of NASA's Earth Science data lifecycle from the initial measurement gathering to the accessing of data products. Missions use metadata in their science data products when describing information such as the instrument/sensor, operational plan, and geographically region. Acting as the curator of the data products, data centers employ metadata for preservation, access and manipulation of data. EOSDIS provides a centralized metadata repository called the Earth Observing System (EOS) ClearingHouse (ECHO) for data discovery and access via a service-oriented-architecture (SOA) between data centers and science data users. ECHO receives inventory metadata from data centers who generate metadata files that complies with the ECHO Metadata Model. NASA's Earth Science Data and Information System (ESDIS) Project established a Tiger Team to study and make recommendations regarding the adoption of the international metadata standard ISO 19115 in EOSDIS. The result was a technical report recommending an evolution of NASA data systems towards a consistent application of ISO 19115 and related standards including the creation of a NASA-specific convention for core ISO 19115 elements. Part of

  2. Salmonella Persistence in Tomatoes Requires a Distinct Set of Metabolic Functions Identified by Transposon Insertion Sequencing

    Science.gov (United States)

    Desai, Prerak; Porwollik, Steffen; Canals, Rocio; Perez, Daniel R.; Chu, Weiping; McClelland, Michael; Teplitski, Max

    2016-01-01

    ABSTRACT Human enteric pathogens, such as Salmonella spp. and verotoxigenic Escherichia coli, are increasingly recognized as causes of gastroenteritis outbreaks associated with the consumption of fruits and vegetables. Persistence in plants represents an important part of the life cycle of these pathogens. The identification of the full complement of Salmonella genes involved in the colonization of the model plant (tomato) was carried out using transposon insertion sequencing analysis. With this approach, 230,000 transposon insertions were screened in tomato pericarps to identify loci with reduction in fitness, followed by validation of the screen results using competition assays of the isogenic mutants against the wild type. A comparison with studies in animals revealed a distinct plant-associated set of genes, which only partially overlaps with the genes required to elicit disease in animals. De novo biosynthesis of amino acids was critical to persistence within tomatoes, while amino acid scavenging was prevalent in animal infections. Fitness reduction of the Salmonella amino acid synthesis mutants was generally more severe in the tomato rin mutant, which hyperaccumulates certain amino acids, suggesting that these nutrients remain unavailable to Salmonella spp. within plants. Salmonella lipopolysaccharide (LPS) was required for persistence in both animals and plants, exemplifying some shared pathogenesis-related mechanisms in animal and plant hosts. Similarly to phytopathogens, Salmonella spp. required biosynthesis of amino acids, LPS, and nucleotides to colonize tomatoes. Overall, however, it appears that while Salmonella shares some strategies with phytopathogens and taps into its animal virulence-related functions, colonization of tomatoes represents a distinct strategy, highlighting this pathogen's flexible metabolism. IMPORTANCE Outbreaks of gastroenteritis caused by human pathogens have been increasingly associated with foods of plant origin, with tomatoes

  3. Biotechnological strategies for enhancing the nutritive and nutraceutical values of tomato (Solanum lycopersicon

    Directory of Open Access Journals (Sweden)

    Charles Ojo OLAIYA

    2015-12-01

    Full Text Available Tomatoes are a unique functional food and a natural reservoir of many health promoting nutrients, antioxidants, dietary fibres and chemopreventive nutraceuticals. They are particularly rich in lycopene which has been associated with the prevention of cardiovascular disease and cancers of the prostate and the gastrointestinal tract. As an important vegetable worldwide, tomatoes have drawn the attention of many researchers. Thus, numerous investigations have been conducted and various improvement strategies applied for enhancing the functionality of this medicinal food geared towards disease prevention, global health and well-being. Molecular breeding has produced a number of tomato lines with enhanced levels of lycopene, β-carotene and xanthophylls. Over expression of certain genes have generated tomato fruits with enhanced ascorbic acid levels and folate accumulation up to 25-fold. Plant hormone technology has been used to enhance tomato minerals, antioxidant vitamins, lycopene, β-carotene, flavonoids and phenolic compounds in tomato fruit tissues. Manipulation in soilless culture solutions is valuable for enhancing the antioxidative capacity of tomatoes, vitamin C, flavonoids, lycopene, and β-carotene in fresh fruits. In addition, the spraying of nutrients, such as potassium, in field conditions has a strong stimulatory effect on lycopene contents of tomatoes. Transgenic strategies are also being adopted. These strategies offer a rapid way to introduce desirable traits into the phenotype and differ from other approaches in that novel genetic information is introduced directly into the plant’s genome. An important and current trend in the improvement of functional foods is to shift from enhancing single nutritional compounds towards enhancing multiple nutrients and phytochemicals in order to harness their synergistic interactions. This could be achieved by the use of strategies having pleitropic effects such as bioregulators, multigene

  4. INFLUENCE OF BIOLOGICALLY ACTIVE SUBSTANCES ON TOMATO YIELD AND QUALITY

    Directory of Open Access Journals (Sweden)

    G. I. Yarovoy

    2017-01-01

    Full Text Available The study of influence of growth regulators and biopreparations affecting on decrease of disease development, increase of yield capacity and final product quality was carried out in tomato. It was shown that all preparations were effective in decreasing the process of diseases development and increasing the yield capacity and product quality. The studies were carried out in the experimental fields at the Institute of Vegetables and Melons NAAS, in Ukraine in 2011-2012. The field studies were performed according to ‘Methodology of Experimental Work in Vegetable and Melon Growing’ on area sown with cultivars ‘Karas’ and ‘Kremenchugskiy’. The fungicides ‘Mars U 77%’, ‘Vimpel with Fitotsid’, ‘Vermistim’ wth ‘Azotofit’ and ‘Bioglobin’ with ‘Azotofit’ were used on cultivars of tomato, as control were the plants without treatment. It was determined that all preparations decreased the development of diseases. On average, the development of early dry spot had decreased by 12.2–16.1% and anthracnose by 10.0–12.6% in the cultivars ‘Kremenchugskiy’ and ‘Karas’. Thus, biopreparations used on the varieties ‘Kremenchugskiy’ and ‘Karas’ were effective in decrease of disease development, such as early dry spot, anthracnose, in a range of 39.1–52.7 %. Generally, during observation period the efficacy index of the preparations ‘Vermistim’ with ‘Azotofit’, ‘Bioglobin’ with ‘Azotofit’ was higher than others preparations on the varieties ‘Kremenchug and ‘Karas’ against early dry spot (48.3–50.9%, 50.3–52.7% and anthracnose (46.1–47.0%, 47.6–48.5%. The results showed that the vast majority of biological preparations, phytohormones used against diseases in tomato crops of varieties ‘Kremenchugskiy’ and ‘Karas’, were effective in a range of 39.1-52.7% and also maintained the tomato yield within 2.8-5.1 t/ha or 8.1- 13.9%. The biological preparations, phytohormones improved

  5. Modelling quality of fresh-cut tomato based on stage of maturity and storage conditions

    OpenAIRE

    Moreira Lana, M.

    2005-01-01

    Fresh-cut or minimally processed vegetables are those which have been trimmed and/or peeled and/or cut into 100% usable product and still maintain freshness. Contrary to other processing methods (freezing, canning and drying for example) the minimal processing operations reduce the shelf life in relation to the raw material (intact product).In this thesis the changes in quality of tomato fruits after cutting into transversal slices were analysed and quantified in relation to the stage of matu...

  6. Antibacterial effect of roselle extracts (Hibiscus sabadariffa), sodium hypochlorite and acetic acid against multidrug-resistant Salmonella strains isolated from tomatoes.

    Science.gov (United States)

    Gutiérrez-Alcántara, E J; Rangel-Vargas, E; Gómez-Aldapa, C A; Falfan-Cortes, R N; Rodríguez-Marín, M L; Godínez-Oviedo, A; Cortes-López, H; Castro-Rosas, J

    2016-02-01

    Antibiotic-resistant Salmonella strains were isolated from saladette and red round type tomatoes, and an analysis done of the antibacterial activity of roselle calyx extracts against any of the identified strains. One hundred saladette tomato samples and 100 red round tomato samples were collected from public markets. Each sample consisted of four whole tomatoes. Salmonella was isolated from the samples by conventional culture procedure. Susceptibility to 16 antibiotics was tested for the isolated Salmonella strains by standard test. The antibacterial effect of four roselle calyx extracts (water, methanol, acetone and ethyl acetate), sodium hypochlorite and acetic acid against antibiotic-resistant Salmonella isolates was evaluated on contaminated tomatoes. Twenty-four Salmonella strains were isolated from 12% of each tomato type. Identified Salmonella serotypes were Typhimurium and Typhi. All isolated strains exhibited resistance to at least three antibiotics and some to as many as 12. Over contaminated tomatoes, the roselle calyx extracts produced a greater reduction (2-2·6 log) in antibiotic-resistant Salmonella strain concentration than sodium hypochlorite and acetic acid. The presence of multidrug-resistant Salmonella in vegetables is a significant public health concern. Multidrug-resistant Salmonella strains were isolated from raw tomatoes purchased in public markets in Mexico and challenged with roselle Hibiscus sabdariffa calyx extracts, sodium hypochlorite and acetic acid. On tomatoes, the extracts caused a greater reduction in the concentration of antibiotic-resistant Salmonella strains than sodium hypochlorite and acetic acid. Roselle calyx extracts are a potentially useful addition to disinfection procedures of raw tomatoes in the field, processing plants, restaurants and homes. © 2015 The Society for Applied Microbiology.

  7. The Global Streamflow Indices and Metadata Archive (GSIM – Part 1: The production of a daily streamflow archive and metadata

    Directory of Open Access Journals (Sweden)

    H. X. Do

    2018-04-01

    Full Text Available This is the first part of a two-paper series presenting the Global Streamflow Indices and Metadata archive (GSIM, a worldwide collection of metadata and indices derived from more than 35 000 daily streamflow time series. This paper focuses on the compilation of the daily streamflow time series based on 12 free-to-access streamflow databases (seven national databases and five international collections. It also describes the development of three metadata products (freely available at https://doi.pangaea.de/10.1594/PANGAEA.887477: (1 a GSIM catalogue collating basic metadata associated with each time series, (2 catchment boundaries for the contributing area of each gauge, and (3 catchment metadata extracted from 12 gridded global data products representing essential properties such as land cover type, soil type, and climate and topographic characteristics. The quality of the delineated catchment boundary is also made available and should be consulted in GSIM application. The second paper in the series then explores production and analysis of streamflow indices. Having collated an unprecedented number of stations and associated metadata, GSIM can be used to advance large-scale hydrological research and improve understanding of the global water cycle.

  8. The Global Streamflow Indices and Metadata Archive (GSIM) - Part 1: The production of a daily streamflow archive and metadata

    Science.gov (United States)

    Do, Hong Xuan; Gudmundsson, Lukas; Leonard, Michael; Westra, Seth

    2018-04-01

    This is the first part of a two-paper series presenting the Global Streamflow Indices and Metadata archive (GSIM), a worldwide collection of metadata and indices derived from more than 35 000 daily streamflow time series. This paper focuses on the compilation of the daily streamflow time series based on 12 free-to-access streamflow databases (seven national databases and five international collections). It also describes the development of three metadata products (freely available at https://doi.pangaea.de/10.1594/PANGAEA.887477" target="_blank">https://doi.pangaea.de/10.1594/PANGAEA.887477): (1) a GSIM catalogue collating basic metadata associated with each time series, (2) catchment boundaries for the contributing area of each gauge, and (3) catchment metadata extracted from 12 gridded global data products representing essential properties such as land cover type, soil type, and climate and topographic characteristics. The quality of the delineated catchment boundary is also made available and should be consulted in GSIM application. The second paper in the series then explores production and analysis of streamflow indices. Having collated an unprecedented number of stations and associated metadata, GSIM can be used to advance large-scale hydrological research and improve understanding of the global water cycle.

  9. Heavy Metals Accumulation Characteristics of Vegetables in Hangzhou City, China

    Directory of Open Access Journals (Sweden)

    GU Yan-qing

    2015-08-01

    Full Text Available A field survey of heavy metal concentrations in soils and vegetables grown in 30 vegetable farmlands of Hangzhou City were carried out. Through calculating the bioconcentration factor(BCFand transfer factor(TFfor different heavy metals(Cu, Zn, Cd, Cr and Pbin 27 kinds of different vegetables which belong to leafy vegetables, root vegetables or eggplant fruit vegetables, assessing their accumulation characteristics of heavy metals according to the differences of the bio-concentration factor, the reasonable proposals were put forward to optimize the planting structure of vegetables in mild and middle-level heavy metal contamination soils. The experimental results were as follows: In soils with mild and middle-level heavy metal contamination, leafy vegetables, such as crown daisy, cabbage, celery and Chinese long cabbage, had relatively low enrichment ability of heavy metals, so as the root and fruit vegetables like white radish, carrot, tomatoes, hence these vegetables could be planted preferentially. In contrast, some kinds of vegetables, including white amaranth, red amaranth, tatsoi, broccoli, gynura, brassica juncea and lettuce of leafy vegetables, lactuca sativa, taro, red radish and cherry radish of rhizome vegetables and sweet pepper of fruit vegetables, had relatively high accumulation ability of heavy metal, which should be avoided to be planted in soils with mild and middle-level heavy metal contamination.

  10. Mycorrhizal Dependency and Response of Tomato ( Lycopersicon ...

    African Journals Online (AJOL)

    A pot experiment was conducted on tomato (Lycopersicon esculentum) to evaluate the responses of tomato to inoculation of mycorrhiza (AMF) under different levels of soil phosphorus (P) concentrations in a greenhouse study. The results showed different responses on dry matter yield, shoot phosphorus concentration, ...

  11. 21 CFR 155.191 - Tomato concentrates.

    Science.gov (United States)

    2010-04-01

    ... Tomato concentrates. (a) Identity—(1) Definition. Tomato concentrates are the class of foods each of... greater in length. (c) Blemishes, such as dark brown or black particles (specks)—not more than four exceed...; place a U.S. No. 12 screen (1.68 millimeters (0.066 inch) openings) over the sink drain; transfer the...

  12. An improved Agrobacterium mediated transformation in tomato ...

    African Journals Online (AJOL)

    Bacterial wilt is a devastating disease of tomato crop throughout the world. This disease is very dangerous in hot and humid regions, where it spreads with the irrigation water to whole field within days, which resulted in severe decline in yield. Two varieties of tomato were used for developing bacterial wilt resistance.

  13. Economic Sustainability of Italian Greenhouse Cherry Tomato

    Directory of Open Access Journals (Sweden)

    Riccardo Testa

    2014-11-01

    Full Text Available Greenhouse tomato cultivation plays an important role in Sicily, being the primary production area in Italy, due to its favorable pedo-climatic conditions that permit extra-seasonal productions. In Sicily, more than half of greenhouse tomato production is derived from the Province of Ragusa on the southeastern coast, where especially cherry tomato typologies are cultivated. Over the last decade, the Ragusa Province has registered a decrease both in terms of greenhouse tomato area and harvested production due to several structural problems that would require restructuring of the tomato supply chain. Thus, since recognition of real costs and profitability of tomato growing is a vital issue, both from the perspective of the farm, as well as from that of the entrepreneur, the aim of this paper was to analyze the economic sustainability of Sicilian greenhouse cherry tomato cultivated in the Ragusa Province. In particular, an economic analysis on 30 representative farms was conducted in order to estimate production costs and profits of greenhouse cherry tomato. According to our results, the lack of commercial organization, which characterizes the small farms we surveyed, determines low contractual power for farmers and, consequently, low profitability.

  14. Isolation and composition of chromoplasts from tomatoes.

    Science.gov (United States)

    Hansen, Linn U; Chiu, Mei-Chen M

    2005-08-24

    The fruit of the tomato plant is composed of elongated tomato cells filled with organelles called chromoplasts (plastids). These plastids scattered throughout the cell are rich in nutrients, particularly protein (33%) and lipids (20%). They can be released from the cells by rupture of their cell membranes and then isolated. Plastids and their cell contents can be utilized by the food-processing industry for the preparation of special food products. This study was designed to examine the macronutrient content of isolated tomato plastids and, therefore, determine its potential nutritional value. Use of tomato plastids in pasta sauces and rice dishes, salsa, and extrusion products would increase the nutritional value of the product. Because glucose has been removed in the process of plastid isolation, tomato plastids are useful in the diets of diabetics and cardiovascular patients, as well as for patients in need of weight reduction. Composition comparison of tomato plastid is made with tomato paste, from which glucose has not been removed. Many people require low-sugar products for medical reasons (diabetics and those with cardiovascular disease) and others for weight loss. Therefore, tomato chromoplasts having high protein and lipid contents and low sugar content may be useful in meeting these particular human needs.

  15. Peeling mechanism of tomato under infrared heating

    Science.gov (United States)

    Critical behaviors of peeling tomatoes using infrared heat are thermally induced peel loosening and subsequent cracking. However, the mechanism of peel loosening and cracking due to infrared heating remains unclear. This study aimed at investigating the mechanism of peeling tomatoes under infrared h...

  16. Prediction of processing tomato peeling outcomes

    Science.gov (United States)

    Peeling outcomes of processing tomatoes were predicted using multivariate analysis of Magnetic Resonance (MR) images. Tomatoes were obtained from a whole-peel production line. Each fruit was imaged using a 7 Tesla MR system, and a multivariate data set was created from 28 different images. After ...

  17. Mineral Content in Leaves of Tomato Plants Grafted on Solanum Rootstocks

    OpenAIRE

    松添, 直隆; 間, 浩美; 花田, 勝美; モハメド, アリ; 大久保, 敬; 藤枝, 國光

    1995-01-01

    Nutrient uptake of tomato plants cv. Momotaro grafted on Solanum sisymbriifoliulm, S. torvum and S. toxicarium which are resistant to soil-born disease were compared with tomato grafted on its own root, a tomato/tomato, scion/rootstock combination. Mineral content in leaves of tomato/S. sisymbriifoliulm was nearly equal to that of tomato/tomato. In leaves of tomato/S. torvum, nitrogen content was higher, and magnesium content was lower than those of tomato/tomato. Furthermore, phosphorus and ...

  18. Plastid and Stromule Morphogenesis in Tomato

    Science.gov (United States)

    PYKE, KEVIN A.; HOWELLS, CAROLINE A.

    2002-01-01

    By using green fluorescent protein targeted to the plastid organelle in tomato (Lycopersicon esculentum Mill.), the morphology of plastids and their associated stromules in epidermal cells and trichomes from stems and petioles and in the chromoplasts of pericarp cells in the tomato fruit has been revealed. A novel characteristic of tomato stromules is the presence of extensive bead‐like structures along the stromules that are often observed as free vesicles, distinct from and apparently unconnected to the plastid body. Interconnections between the red pigmented chromoplast bodies are common in fruit pericarp cells suggesting that chromoplasts could form a complex network in this cell type. The potential implications for carotenoid biosynthesis in tomato fruit and for vesicles originating from beaded stromules as a secretory mechanism for plastids in glandular trichomes of tomato is discussed. PMID:12466096

  19. Characteristics important for organic breeding of vegetable crops

    Directory of Open Access Journals (Sweden)

    Zdravković Jasmina

    2010-01-01

    Full Text Available The remarkable development and application of new genetic The Institute for Vegetable Crops possesses a rich germplasm collection of vegetables, utilized as gene resource for breeding specific traits. Onion and garlic breeding programs are based on chemical composition improvement. There are programs for identification and use of genotypes characterized by high tolerance to economically important diseases. Special attention is paid to breeding cucumber and tomato lines tolerant to late blight. As a result, late blight tolerant pickling cucumber line, as well as late blight tolerant tomato lines and hybrids are realized. Research on bean drought stress tolerance is initiated. Lettuce breeding program including research on spontaneous flora is started and interspecies hybrids were observed as possible genetic variability source. It is important to have access to a broad range of vegetable genotypes in order to meet the needs of organic agriculture production. Appreciating the concept of sustainable agriculture, it is important to introduce organic agriculture programs in breeding institutions.

  20. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics.

    Science.gov (United States)

    Aoki, Koh; Yano, Kentaro; Suzuki, Ayako; Kawamura, Shingo; Sakurai, Nozomu; Suda, Kunihiro; Kurabayashi, Atsushi; Suzuki, Tatsuya; Tsugane, Taneaki; Watanabe, Manabu; Ooga, Kazuhide; Torii, Maiko; Narita, Takanori; Shin-I, Tadasu; Kohara, Yuji; Yamamoto, Naoki; Takahashi, Hideki; Watanabe, Yuichiro; Egusa, Mayumi; Kodama, Motoichiro; Ichinose, Yuki; Kikuchi, Mari; Fukushima, Sumire; Okabe, Akiko; Arie, Tsutomu; Sato, Yuko; Yazawa, Katsumi; Satoh, Shinobu; Omura, Toshikazu; Ezura, Hiroshi; Shibata, Daisuke

    2010-03-30

    The Solanaceae family includes several economically important vegetable crops. The tomato (Solanum lycopersicum) is regarded as a model plant of the Solanaceae family. Recently, a number of tomato resources have been developed in parallel with the ongoing tomato genome sequencing project. In particular, a miniature cultivar, Micro-Tom, is regarded as a model system in tomato genomics, and a number of genomics resources in the Micro-Tom-background, such as ESTs and mutagenized lines, have been established by an international alliance. To accelerate the progress in tomato genomics, we developed a collection of fully-sequenced 13,227 Micro-Tom full-length cDNAs. By checking redundant sequences, coding sequences, and chimeric sequences, a set of 11,502 non-redundant full-length cDNAs (nrFLcDNAs) was generated. Analysis of untranslated regions demonstrated that tomato has longer 5'- and 3'-untranslated regions than most other plants but rice. Classification of functions of proteins predicted from the coding sequences demonstrated that nrFLcDNAs covered a broad range of functions. A comparison of nrFLcDNAs with genes of sixteen plants facilitated the identification of tomato genes that are not found in other plants, most of which did not have known protein domains. Mapping of the nrFLcDNAs onto currently available tomato genome sequences facilitated prediction of exon-intron structure. Introns of tomato genes were longer than those of Arabidopsis and rice. According to a comparison of exon sequences between the nrFLcDNAs and the tomato genome sequences, the frequency of nucleotide mismatch in exons between Micro-Tom and the genome-sequencing cultivar (Heinz 1706) was estimated to be 0.061%. The collection of Micro-Tom nrFLcDNAs generated in this study will serve as a valuable genomic tool for plant biologists to bridge the gap between basic and applied studies. The nrFLcDNA sequences will help annotation of the tomato whole-genome sequence and aid in tomato functional

  1. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum cultivar Micro-Tom, a reference system for the Solanaceae genomics

    Directory of Open Access Journals (Sweden)

    Kikuchi Mari

    2010-03-01

    Full Text Available Abstract Background The Solanaceae family includes several economically important vegetable crops. The tomato (Solanum lycopersicum is regarded as a model plant of the Solanaceae family. Recently, a number of tomato resources have been developed in parallel with the ongoing tomato genome sequencing project. In particular, a miniature cultivar, Micro-Tom, is regarded as a model system in tomato genomics, and a number of genomics resources in the Micro-Tom-background, such as ESTs and mutagenized lines, have been established by an international alliance. Results To accelerate the progress in tomato genomics, we developed a collection of fully-sequenced 13,227 Micro-Tom full-length cDNAs. By checking redundant sequences, coding sequences, and chimeric sequences, a set of 11,502 non-redundant full-length cDNAs (nrFLcDNAs was generated. Analysis of untranslated regions demonstrated that tomato has longer 5'- and 3'-untranslated regions than most other plants but rice. Classification of functions of proteins predicted from the coding sequences demonstrated that nrFLcDNAs covered a broad range of functions. A comparison of nrFLcDNAs with genes of sixteen plants facilitated the identification of tomato genes that are not found in other plants, most of which did not have known protein domains. Mapping of the nrFLcDNAs onto currently available tomato genome sequences facilitated prediction of exon-intron structure. Introns of tomato genes were longer than those of Arabidopsis and rice. According to a comparison of exon sequences between the nrFLcDNAs and the tomato genome sequences, the frequency of nucleotide mismatch in exons between Micro-Tom and the genome-sequencing cultivar (Heinz 1706 was estimated to be 0.061%. Conclusion The collection of Micro-Tom nrFLcDNAs generated in this study will serve as a valuable genomic tool for plant biologists to bridge the gap between basic and applied studies. The nrFLcDNA sequences will help annotation of the

  2. Screening and selection of tomato genotypes/cultivars for drought tolerance using multivariate analysis

    International Nuclear Information System (INIS)

    Shamim, F.; Waheed, A.; Saqlan, S.M.; Athar, H.U.R.

    2014-01-01

    Drought is one of the most important abiotic stresses reducing crop growth and yield of tomato. Development of water stress tolerant cultivars through screening and selection is one important strategy to overcome this problem. In the present study, seeds of 120 local and exotic lines of tomato were allowed to germinate at varying levels of polyethylene glycol (PEG8000) induced water stress (PEG8000 0, 2.5%, 5.0% and 7.5%) for two weeks. Increasing PEG concentrations in the growth medium (water stress) caused a consistent decrease in seed germination percentage and seedling growth of all tomato cultivars. Moreover, a significant amount of genetic variability was found in all attributes of 120 genotypes of tomato. All lines/cultivars of tomato were ranked on the basis of relative water stress tolerance using 13 morphometric traits and categorized in four groups (tolerant, moderately tolerant, moderately sensitive, and sensitive) through multivariate analysis. Of 120 lines, 18, 25, 29 and 48 lines were ranked as tolerant, moderately tolerant, moderately sensitive and sensitive respectively. The germination percentage or speeds of germination were not found as effective indicator of genotypic differences for water stress at the seedling stage. Moreover, degree of water stress tolerance at the germination and seedling growth stage did not maintain in all tomato lines. Thus, it is not certain whether such variation is detectable at the later vegetative or reproductive growth stages. This needs to be further investigated. Overall, lines 19905, 19906, LA0716, and LA0722 were found to be water stress tolerant at least at early growth stages. (author)

  3. ECONOMIC EFFICIENCY IN TOMATOES PRODUCTION IN GREENHOUSES

    Directory of Open Access Journals (Sweden)

    A POPESCU

    2003-07-01

    Full Text Available This study aimed to appreciate the evolution of economic efficiency in tomatoes production in greenhouses within a private firm situated next to the capital. The firm owns 4 ha greenhouses and the weight of tomatoes crop in the cultivated area is just 38.75 %. In fact, during the last three years, the tomatoes cultivated surface has been diminished in favour of flowers production which, like tomatoes production is an important income source for any producer. The reduction of the tomatoes cultivated area was compensated by the increase of intensification grade using new high performance hybrids and modern technologies. Thus, the scientific production management has been looking for maintaining the total production at the same level from a year to another by an increased average tomatoes yield by 53.33 % . The continuous increase of farm input price has doubled the cost per surface unit and increased the cost per tomatoes kilogram by 33 %. The increase of tomatoes demand and of market price by 31 % have had a positive influence on the farm incomes which has doubled during the last three years. In the year 2000, the company has obtained USD 41,818 income/ha of which subtracting the related production cost we can easily get USD 4,815 profit/ha. The average profit rate recorded by the firm is 13 % in the period 2000-2002, when the study was made. As a conclusion, tomatoes production in greenhouses is a good deal. To keep a high economic efficiency, under the diminishing of the cultivated area, the producers have to increase average tomatoes production by using high performance technology based on high economic value hybrids.

  4. Using XML to encode TMA DES metadata

    Directory of Open Access Journals (Sweden)

    Oliver Lyttleton

    2011-01-01

    Full Text Available Background: The Tissue Microarray Data Exchange Specification (TMA DES is an XML specification for encoding TMA experiment data. While TMA DES data is encoded in XML, the files that describe its syntax, structure, and semantics are not. The DTD format is used to describe the syntax and structure of TMA DES, and the ISO 11179 format is used to define the semantics of TMA DES. However, XML Schema can be used in place of DTDs, and another XML encoded format, RDF, can be used in place of ISO 11179. Encoding all TMA DES data and metadata in XML would simplify the development and usage of programs which validate and parse TMA DES data. XML Schema has advantages over DTDs such as support for data types, and a more powerful means of specifying constraints on data values. An advantage of RDF encoded in XML over ISO 11179 is that XML defines rules for encoding data, whereas ISO 11179 does not. Materials and Methods: We created an XML Schema version of the TMA DES DTD. We wrote a program that converted ISO 11179 definitions to RDF encoded in XML, and used it to convert the TMA DES ISO 11179 definitions to RDF. Results: We validated a sample TMA DES XML file that was supplied with the publication that originally specified TMA DES using our XML Schema. We successfully validated the RDF produced by our ISO 11179 converter with the W3C RDF validation service. Conclusions: All TMA DES data could be encoded using XML, which simplifies its processing. XML Schema allows datatypes and valid value ranges to be specified for CDEs, which enables a wider range of error checking to be performed using XML Schemas than could be performed using DTDs.

  5. Using XML to encode TMA DES metadata.

    Science.gov (United States)

    Lyttleton, Oliver; Wright, Alexander; Treanor, Darren; Lewis, Paul

    2011-01-01

    The Tissue Microarray Data Exchange Specification (TMA DES) is an XML specification for encoding TMA experiment data. While TMA DES data is encoded in XML, the files that describe its syntax, structure, and semantics are not. The DTD format is used to describe the syntax and structure of TMA DES, and the ISO 11179 format is used to define the semantics of TMA DES. However, XML Schema can be used in place of DTDs, and another XML encoded format, RDF, can be used in place of ISO 11179. Encoding all TMA DES data and metadata in XML would simplify the development and usage of programs which validate and parse TMA DES data. XML Schema has advantages over DTDs such as support for data types, and a more powerful means of specifying constraints on data values. An advantage of RDF encoded in XML over ISO 11179 is that XML defines rules for encoding data, whereas ISO 11179 does not. We created an XML Schema version of the TMA DES DTD. We wrote a program that converted ISO 11179 definitions to RDF encoded in XML, and used it to convert the TMA DES ISO 11179 definitions to RDF. We validated a sample TMA DES XML file that was supplied with the publication that originally specified TMA DES using our XML Schema. We successfully validated the RDF produced by our ISO 11179 converter with the W3C RDF validation service. All TMA DES data could be encoded using XML, which simplifies its processing. XML Schema allows datatypes and valid value ranges to be specified for CDEs, which enables a wider range of error checking to be performed using XML Schemas than could be performed using DTDs.

  6. Using XML to encode TMA DES metadata

    Science.gov (United States)

    Lyttleton, Oliver; Wright, Alexander; Treanor, Darren; Lewis, Paul

    2011-01-01

    Background: The Tissue Microarray Data Exchange Specification (TMA DES) is an XML specification for encoding TMA experiment data. While TMA DES data is encoded in XML, the files that describe its syntax, structure, and semantics are not. The DTD format is used to describe the syntax and structure of TMA DES, and the ISO 11179 format is used to define the semantics of TMA DES. However, XML Schema can be used in place of DTDs, and another XML encoded format, RDF, can be used in place of ISO 11179. Encoding all TMA DES data and metadata in XML would simplify the development and usage of programs which validate and parse TMA DES data. XML Schema has advantages over DTDs such as support for data types, and a more powerful means of specifying constraints on data values. An advantage of RDF encoded in XML over ISO 11179 is that XML defines rules for encoding data, whereas ISO 11179 does not. Materials and Methods: We created an XML Schema version of the TMA DES DTD. We wrote a program that converted ISO 11179 definitions to RDF encoded in XML, and used it to convert the TMA DES ISO 11179 definitions to RDF. Results: We validated a sample TMA DES XML file that was supplied with the publication that originally specified TMA DES using our XML Schema. We successfully validated the RDF produced by our ISO 11179 converter with the W3C RDF validation service. Conclusions: All TMA DES data could be encoded using XML, which simplifies its processing. XML Schema allows datatypes and valid value ranges to be specified for CDEs, which enables a wider range of error checking to be performed using XML Schemas than could be performed using DTDs. PMID:21969921

  7. Genome Sequences of Two Pseudomonas syringae pv. tomato Race 1 Strains, Isolated from Tomato Fields in California

    OpenAIRE

    Thapa, Shree P.; Coaker, Gitta

    2016-01-01

    Pseudomonas syringae pv. tomato race 1 strains have evolved to overcome genetic resistance in tomato. Here, we present the draft genome sequences of two race 1 P.?syringae pv. tomato strains, A9 and 407, isolated from diseased tomato plants in California.

  8. Effects of tomato variety, temperature differential and post-stem removal time on internalization of Salmonella Thompson into tomatoes

    Science.gov (United States)

    Tomatoes have been implicated in several Salmonellosis outbreaks due to possible contamination through bacterial infiltration into tomatoes during post-harvest handling. The aim of this study was to determine the effects of tomato variety, dump tank water to tomato pulp temperature differential, and...

  9. THE CHARACTERISATION OF FUNGI Passalora fulva (Cooke U.Braun&Crous PATHOTYPES, CAUSER OF TOMATO LEAF MOLD IN CROATIA

    Directory of Open Access Journals (Sweden)

    Adrijana Novak

    2012-12-01

    Full Text Available Tomato is considered one of the most widely grown vegetable crops in the world and production of it is rising every year in Croatia as well as in the world. This research paper shows results on tomato leaf mould caused by Passalora fulva (Cooke U.Braun & Crous (syn. Cladosporium fulvum (Cooke, which can cause significant reduction of yield and quality of tomato. Other than economic loss, tomato leaf mould can be the cause of allergies because it produces lots of spores. During research, the following materials and methods have been used: collecting samples of plant material infected with tomato leaf mould and assessments of disease intensity, isolation and determination of the pathogen, detecting pathotypes using biassay, susceptibility testing of different tomato genotypes infected with P. fulva, molecular identification and testing the effects of essential oils in vitro on conidia germination. Visual controls of greenhouse and outdoor growing tomato were conducted during the period from 2006 to 2011. Samples (17 from 14 localities in 10 counties (Istra County, Koprivnica-Križevci County, KrapinaZagorje County, Međimurje County, Osijek-BaranjaCounty, Primorje-Gorski Kotar County, Varaždin County, Virovitica-Podravina County, Zadar County and Zagreb County were collected. Symptoms were detected on 6 different tomato genotypes: Belle, Jeremy, Minaret, Amaneta, Gravitet and test genotype. Outdoors, P. fulva was not found. For isolation and determination of P. fulva 4 different growing media were used: PDA (potato – dextrose agar, tomato – agar, carrot – agar and V8 – agar. By measuring the size of conidia on carrot – agar it was determined that they were the closest in size to the conidia from infected tomato leaf. Bioassay for the first time in Croatia confirmed presence of two different physiological pathotypes of P. fulva, Cf – 0 and Cf – 5. Other pathotypes obtained by bioassay were not confirmed by sequencing because the

  10. Influence of Heat Treatments on Carotenoid Content of Cherry Tomatoes

    OpenAIRE

    D'Evoli, Laura; Lombardi-Boccia, Ginevra; Lucarini, Massimo

    2013-01-01

    Tomatoes and tomato products are rich sources of carotenoids—principally lycopene, followed by β-carotene and lutein. The aim of this work was to study the effect of heat treatment on carotenoid content in cherry tomatoes. Raw and canned products were sampled and analysed; furthermore whole, skin and pulp fractions of cherry tomatoes were analysed when raw and home-processed, in order to better understand heat treatment effects. Lycopene content in canned tomatoes was two-fold higher than in ...

  11. Evaluation of the Content of Lead, Cadmium, Mercury, Arsenic, Tin, Copper and Zinc during the Production Process Flow of Tomato Broth

    Directory of Open Access Journals (Sweden)

    Corina Andrei

    2013-11-01

    Full Text Available Heavy metals are among the largest contaminants of food products. Once metals are present in vegetables, their concentrations are rarely modified by industrial processing techniques, although in some cases washing may decrease the metal content. The main objective of this study was to quantify the effect of industrial processing on the content of lead, cadmium, mercury, arsenic, tin, copper and zinc in tomatoes and products resulting on flow technology of tomato broth. For the determination of essential elements and/or potentially toxic was use atomic absorption spectrometry. The analytical results for quantitative evaluation the concentrations of the investigated elements on the samples of tomatoes taken from the technological process of the production of tomato broth indicated the presence of Pb, Cd, Cu and Zn but with a level of concentration that significantly decreased in the finished product and the absence of metals Hg and As in all investigated samples. Effect of industrial processing on the content of tin in tomato samples analyzed was characterized by fluctuations in the residual content that led to a significant increase in concentration of 0.100 ± 0.041 mg kg-1 (tomatoes - unprocessed to 0.200 ± 0.041 mg kg-1 (tomato broth.

  12. Effects of Short-Term Biosolarization Using Mature Compost and Industrial Tomato Waste Amendments on the Generation and Persistence of Biocidal Soil Conditions and Subsequent Tomato Growth.

    Science.gov (United States)

    Achmon, Yigal; Sade, Nir; Wilhelmi, María Del Mar Rubio; Fernández-Bayo, Jesus D; Harrold, Duff R; Stapleton, James J; VanderGheynst, Jean S; Blumwald, Eduardo; Simmons, Christopher W

    2018-06-06

    Conventional solarization and biosolarization with mature compost and tomato processing residue amendments were compared with respect to generation of pesticidal conditions and tomato ( Solanum lycopersicum L.) plant growth in treated soils. Soil oxygen depletion was examined as a response that has previously not been measured across multiple depths during biosolarization. For biosolarized soil, volatile fatty acids were found to accumulate concurrent with oxygen depletion, and the magnitude of these changes varied by soil depth. Two consecutive years of experimentation showed varying dissipation of volatile fatty acids from biosolarized soils post-treatment. When residual volatile fatty acids were detected in the biosolarized soil, fruit yield did not significantly differ from plants grown in solarized soil. However, when there was no residual volatile fatty acids in the soil at the time of planting, plants grown in biosolarized soil showed a significantly greater vegetation amount, fruit quantity, and fruit ripening than those of plants grown in solarized soil.

  13. Mercury- Distributed Metadata Management, Data Discovery and Access System

    Science.gov (United States)

    Palanisamy, Giri; Wilson, Bruce E.; Devarakonda, Ranjeet; Green, James M.

    2007-12-01

    Mercury is a federated metadata harvesting, search and retrieval tool based on both open source and ORNL- developed software. It was originally developed for NASA, and the Mercury development consortium now includes funding from NASA, USGS, and DOE. Mercury supports various metadata standards including XML, Z39.50, FGDC, Dublin-Core, Darwin-Core, EML, and ISO-19115 (under development). Mercury provides a single portal to information contained in disparate data management systems. It collects metadata and key data from contributing project servers distributed around the world and builds a centralized index. The Mercury search interfaces then allow the users to perform simple, fielded, spatial and temporal searches across these metadata sources. This centralized repository of metadata with distributed data sources provides extremely fast search results to the user, while allowing data providers to advertise the availability of their data and maintain complete control and ownership of that data. Mercury supports various projects including: ORNL DAAC, NBII, DADDI, LBA, NARSTO, CDIAC, OCEAN, I3N, IAI, ESIP and ARM. The new Mercury system is based on a Service Oriented Architecture and supports various services such as Thesaurus Service, Gazetteer Web Service and UDDI Directory Services. This system also provides various search services including: RSS, Geo-RSS, OpenSearch, Web Services and Portlets. Other features include: Filtering and dynamic sorting of search results, book-markable search results, save, retrieve, and modify search criteria.

  14. Effects of Vegetables on Cardiovascular Diseases and Related Mechanisms

    Directory of Open Access Journals (Sweden)

    Guo-Yi Tang

    2017-08-01

    Full Text Available Epidemiological studies have shown that vegetable consumption is inversely related to the risk of cardiovascular diseases. Moreover, research has indicated that many vegetables like potatoes, soybeans, sesame, tomatoes, dioscorea, onions, celery, broccoli, lettuce and asparagus showed great potential in preventing and treating cardiovascular diseases, and vitamins, essential elements, dietary fibers, botanic proteins and phytochemicals were bioactive components. The cardioprotective effects of vegetables might involve antioxidation; anti-inflammation; anti-platelet; regulating blood pressure, blood glucose, and lipid profile; attenuating myocardial damage; and modulating relevant enzyme activities, gene expression, and signaling pathways as well as some other biomarkers associated to cardiovascular diseases. In addition, several vegetables and their bioactive components have been proven to protect against cardiovascular diseases in clinical trials. In this review, we analyze and summarize the effects of vegetables on cardiovascular diseases based on epidemiological studies, experimental research, and clinical trials, which are significant to the application of vegetables in prevention and treatment of cardiovascular diseases.

  15. Nutritional evaluation of dried tomato seeds.

    Science.gov (United States)

    Persia, M E; Parsons, C M; Schang, M; Azcona, J

    2003-01-01

    Two samples of tomato seeds, a by-product of the tomato canning industry were evaluated to determine proximate analysis, amino acid content, and digestibility, TMEn, and protein efficiency ratio. Tomato seeds were also used to replace corn and soybean meal (SBM) in a chick diet on an equal true amino acid digestibility and TMEn basis. Tomato seeds were found to contain 8.5% moisture, 25% CP, 20.0% fat, 3.1% ash, 35.1% total dietary fiber, 0.12% Ca, 0.58% P, and 3,204 kcal/kg of TMEn. The total amounts of methionine, cystine, and lysine in the tomato seeds were 0.39, 0.40, and 1.34%, respectively, and their true digestibility coefficients, determined in cecectomized roosters, were 75, 70, and 54%, respectively. The protein efficiency ratio (weight gain per unit of protein intake) value when fed to chicks at 9% CP was 2.5 compared to 3.6 for SBM (P seeds could replace corn and SBM without any adverse affects on chick weight gain, feed intake, or gain:feed ratio from 8 to 21 d posthatch. Tomato seeds at any level in the diet did not significantly affect skin pigmentation. Although the protein quality of tomato seeds may not be as high as SBM, tomato seeds do contain substantial amounts of digestible amino acids and TMEn. When formulating diets on a true digestible amino acid and TMEn basis, tomato seeds can be supplemented into chick rations at up to 15% without any adverse affects on growth performance.

  16. Genome-wide identification and expression analysis of aquaporins in tomato.

    Science.gov (United States)

    Reuscher, Stefan; Akiyama, Masahito; Mori, Chiharu; Aoki, Koh; Shibata, Daisuke; Shiratake, Katsuhiro

    2013-01-01

    The family of aquaporins, also called water channels or major intrinsic proteins, is characterized by six transmembrane domains that together facilitate the transport of water and a variety of low molecular weight solutes. They are found in all domains of life, but show their highest diversity in plants. Numerous studies identified aquaporins as important targets for improving plant performance under drought stress. The phylogeny of aquaporins is well established based on model species like Arabidopsis thaliana, which can be used as a template to investigate aquaporins in other species. In this study we comprehensively identified aquaporin encoding genes in tomato (Solanum lycopersicum), which is an important vegetable crop and also serves as a model for fleshy fruit development. We found 47 aquaporin genes in the tomato genome and analyzed their structural features. Based on a phylogenetic analysis of the deduced amino acid sequences the aquaporin genes were assigned to five subfamilies (PIPs, TIPs, NIPs, SIPs and XIPs) and their substrate specificity was assessed on the basis of key amino acid residues. As ESTs were available for 32 genes, expression of these genes was analyzed in 13 different tissues and developmental stages of tomato. We detected tissue-specific and development-specific expression of tomato aquaporin genes, which is a first step towards revealing the contribution of aquaporins to water and solute transport in leaves and during fruit development.

  17. Towards allele mining of bacterial wilt disease resistance gene in tomato

    International Nuclear Information System (INIS)

    Galvez, H.F.; Narciso, J.O.; Opina, N.L.; Canama, A.O.; Colle, M.G.; Latiza, M.A.; Caspillo, C.L.; Bituin, J.L.; Frankie, R.B.; Hautea, D.M.

    2005-01-01

    Tomato (Lycopersicon esculentum Mill.) is the most important vegetable commodity of the Philippines. Bacterial wilt caused by Ralstonia solanacearum is one serious constraint in tomato production particularly during off-season planting. A major locus derived from H7996 that confers resistance to bacterial wilt has been mapped in the tomato genome. To validate the biological function of the resistance locus and generate multiple allele -mimics-, targeted mutation was induced in tomato using gamma ray and ethyl methane sulfonate (EMS) mutagens. Suitable mutagen treatment was established by evaluating a wide range of mutagen doses/concentrations for a) percent seed germination, b) reduction in plant height, and c) loss of resistance. Six hundred Gy and 1.0% EMS were identified to generate large M1 families of H7996. From 10,000 initial seeds treated with either gamma ray or EMS, a total of 3,663 M1 plants were generated. M2 seeds were harvested from all surviving M1 plants. Several DNA markers have been resourced and are being developed specific to the bacterial wilt resistant gene. In the large M2 population, of H7996, both the phenotypic manifestation of bacterial wilt susceptibility and nucleotide changes in the resistance locus will be evaluated. Large M3 families for the different allele series of the bacterial wilt resistance gene will be established for future high throughput TILLING (Targeting Induced Local Lesions in Genomes) analysis in the gene region

  18. Genome-wide identification and expression analysis of aquaporins in tomato.

    Directory of Open Access Journals (Sweden)

    Stefan Reuscher

    Full Text Available The family of aquaporins, also called water channels or major intrinsic proteins, is characterized by six transmembrane domains that together facilitate the transport of water and a variety of low molecular weight solutes. They are found in all domains of life, but show their highest diversity in plants. Numerous studies identified aquaporins as important targets for improving plant performance under drought stress. The phylogeny of aquaporins is well established based on model species like Arabidopsis thaliana, which can be used as a template to investigate aquaporins in other species. In this study we comprehensively identified aquaporin encoding genes in tomato (Solanum lycopersicum, which is an important vegetable crop and also serves as a model for fleshy fruit development. We found 47 aquaporin genes in the tomato genome and analyzed their structural features. Based on a phylogenetic analysis of the deduced amino acid sequences the aquaporin genes were assigned to five subfamilies (PIPs, TIPs, NIPs, SIPs and XIPs and their substrate specificity was assessed on the basis of key amino acid residues. As ESTs were available for 32 genes, expression of these genes was analyzed in 13 different tissues and developmental stages of tomato. We detected tissue-specific and development-specific expression of tomato aquaporin genes, which is a first step towards revealing the contribution of aquaporins to water and solute transport in leaves and during fruit development.

  19. Mulching for sustainable use of saline water to grow tomato in sultanate of oman

    International Nuclear Information System (INIS)

    Wahaibi, N.S.A.; Hussain, N.; Rawah, A.A.

    2007-01-01

    Tomato is grown in 991 hectares with production of 44477 tons in the sultanate of Oman. It is very important vegetable crop of Oman oat present being an integral part of daily diet of the people in various from like salad. Ketchup and kitchen cooking. Oman agriculture relies upon groundwater only, a major portion of which is saline that may concentrate further with the ever increasing pumping and probable seawater intrusions. Hence, the use of saline water is inevitable that can ultimately salinized the good productive soils. The production potential of these soils will gradually decrease and sustainability cannot be kept. This study was conducted to manage the saline water for avoiding bad effect on crop yields and soil health. A field experiment was conducted on tomato (Ginan variety) crop. Two mulching materials: organic matter (from date palm residues) and black plastic sheet, were tested in comparison to control (without any mulch). Two saline waters (EC=3 and 6 dSm/sup -1/) were used for irrigation. Uniform dose of fertilizers was applied. Four pickings of tomato were obtained and yield data were recorded EC moisture % age and temperature of soils were recorded after harvesting of crops. It was observed that data palm mulch proved as the most superior in terms of tomato fruit yield and control of increase in soil EC and temperature. It was followed by black plastic mulch. Both types of mulches indicated significant differences over control as well as among each other. (author)

  20. Carotenoid Profile of Tomato Sauces: Effect of Cooking Time and Content of Extra Virgin Olive Oil

    Directory of Open Access Journals (Sweden)

    Anna Vallverdú-Queralt

    2015-04-01

    Full Text Available The consumption of carotenoid-rich vegetables such as tomatoes and tomato sauces is associated with reduced risk of several chronic diseases. The predominant carotenoids in tomato products are in the (all-E configuration, but (Z isomers can be formed during thermal processing. The effect of cooking time (15, 30, 45 and 60 min and the addition of extra virgin olive oil (5% and 10% on the carotenoid extractability of tomato sauces was monitored using liquid chromatography-tandem mass spectrometry (LC-ESI-MS/MS and LC-ultraviolet detection (LC-UV. The thermal treatment and the addition of extra virgin olive oil increased the levels of antioxidant activity, total carotenoids, Z-lycopene isomers, α-carotene and β-carotene. These results are of particular nutritional benefit since higher lycopene intake has been associated with a reduced risk of lethal prostate and a reduction of prostate-specific antigen (PSA levels. Moreover, β-carotene has been reported to suppress the up-regulation of heme oxygenase-1 gene expression in a dose dependent manner and to suppress UVA-induced HO-1 gene expression in cultured FEK4.

  1. Genome-wide identification and characterization of the bHLH gene family in tomato.

    Science.gov (United States)

    Sun, Hua; Fan, Hua-Jie; Ling, Hong-Qing

    2015-01-22

    The basic helix-loop-helix (bHLH) proteins are a large superfamily of transcription factors, and play a central role in a wide range of metabolic, physiological, and developmental processes in higher organisms. Tomato is an important vegetable crop, and its genome sequence has been published recently. However, the bHLH gene family of tomato has not been systematically identified and characterized yet. In this study, we identified 159 bHLH protein-encoding genes (SlbHLH) in tomato genome and analyzed their structures. Although bHLH domains were conserved among the bHLH proteins between tomato and Arabidopsis, the intron sequences and distribution of tomato bHLH genes were extremely different compared with Arabidopsis. The gene duplication analysis showed that 58.5% and 6.3% of SlbHLH genes belonged to low-stringency and high-stringency duplication, respectively, indicating that the SlbHLH genes are mainly generated via short low-stringency region duplication in tomato. Subsequently, we classified the SlbHLH genes into 21 subfamilies by phylogenetic tree analysis, and predicted their possible functions by comparison with their homologous genes of Arabidopsis. Moreover, the expression profile analysis of SlbHLH genes from 10 different tissues showed that 21 SlbHLH genes exhibited tissue-specific expression. Further, we identified that 11 SlbHLH genes were associated with fruit development and ripening (eight of them associated with young fruit development and three with fruit ripening). The evolutionary analysis revealed that 92% SlbHLH genes might be evolved from ancestor(s) originated from early land plant, and 8% from algae. In this work, we systematically identified SlbHLHs by analyzing the tomato genome sequence using a set of bioinformatics approaches, and characterized their chromosomal distribution, gene structures, duplication, phylogenetic relationship and expression profiles, as well predicted their possible biological functions via comparative analysis

  2. Meta-Data Objects as the Basis for System Evolution

    CERN Document Server

    Estrella, Florida; Tóth, N; Kovács, Z; Le Goff, J M; Clatchey, Richard Mc; Toth, Norbert; Kovacs, Zsolt; Goff, Jean-Marie Le

    2001-01-01

    One of the main factors driving object-oriented software development in the Web- age is the need for systems to evolve as user requirements change. A crucial factor in the creation of adaptable systems dealing with changing requirements is the suitability of the underlying technology in allowing the evolution of the system. A reflective system utilizes an open architecture where implicit system aspects are reified to become explicit first-class (meta-data) objects. These implicit system aspects are often fundamental structures which are inaccessible and immutable, and their reification as meta-data objects can serve as the basis for changes and extensions to the system, making it self- describing. To address the evolvability issue, this paper proposes a reflective architecture based on two orthogonal abstractions - model abstraction and information abstraction. In this architecture the modeling abstractions allow for the separation of the description meta-data from the system aspects they represent so that th...

  3. Statistical Data Processing with R – Metadata Driven Approach

    Directory of Open Access Journals (Sweden)

    Rudi SELJAK

    2016-06-01

    Full Text Available In recent years the Statistical Office of the Republic of Slovenia has put a lot of effort into re-designing its statistical process. We replaced the classical stove-pipe oriented production system with general software solutions, based on the metadata driven approach. This means that one general program code, which is parametrized with process metadata, is used for data processing for a particular survey. Currently, the general program code is entirely based on SAS macros, but in the future we would like to explore how successfully statistical software R can be used for this approach. Paper describes the metadata driven principle for data validation, generic software solution and main issues connected with the use of statistical software R for this approach.

  4. A Generic Metadata Editor Supporting System Using Drupal CMS

    Science.gov (United States)

    Pan, J.; Banks, N. G.; Leggott, M.

    2011-12-01

    Metadata handling is a key factor in preserving and reusing scientific data. In recent years, standardized structural metadata has become widely used in Geoscience communities. However, there exist many different standards in Geosciences, such as the current version of the Federal Geographic Data Committee's Content Standard for Digital Geospatial Metadata (FGDC CSDGM), the Ecological Markup Language (EML), the Geography Markup Language (GML), and the emerging ISO 19115 and related standards. In addition, there are many different subsets within the Geoscience subdomain such as the Biological Profile of the FGDC (CSDGM), or for geopolitical regions, such as the European Profile or the North American Profile in the ISO standards. It is therefore desirable to have a software foundation to support metadata creation and editing for multiple standards and profiles, without re-inventing the wheels. We have developed a software module as a generic, flexible software system to do just that: to facilitate the support for multiple metadata standards and profiles. The software consists of a set of modules for the Drupal Content Management System (CMS), with minimal inter-dependencies to other Drupal modules. There are two steps in using the system's metadata functions. First, an administrator can use the system to design a user form, based on an XML schema and its instances. The form definition is named and stored in the Drupal database as a XML blob content. Second, users in an editor role can then use the persisted XML definition to render an actual metadata entry form, for creating or editing a metadata record. Behind the scenes, the form definition XML is transformed into a PHP array, which is then rendered via Drupal Form API. When the form is submitted the posted values are used to modify a metadata record. Drupal hooks can be used to perform custom processing on metadata record before and after submission. It is trivial to store the metadata record as an actual XML file

  5. COMPARISON OF CAROTENOID CONTENT IN TOMATO, TOMATO PULP AND KETCHUP BY LIQUID CHROMATOGRAPHY

    Directory of Open Access Journals (Sweden)

    J. J. T. GAMA

    2009-01-01

    Full Text Available

    Although tomatoes are commonly consumed fresh, over 80 % the consumption of tomatoes is in the form of processed products such as tomato pulp, ketchup, juice and sauce. Research has indicated the potential health benefits of a diet rich in tomatoes and tomato products. The present study was carried out to determine the carotenoid content of fresh tomato, tomato pulp and ketchup by high performance liquid chromatography. The major differences among these products were in the concentration of some of the pigments. Tomato had all-trans-lycopene (1046-1099 μg/g DW, cislycopene (125-132 μg/g DW and all-trans- -carotene (45-59 μg/g DW as principal carotenoids. Tomato pulp and ketchup had all-trans-lycopene (951-999 μg/g DW and 455-476 μg/g DW, all-trans- -carotene (76-88 DW μg/g and 20-27 DW μg/g and cis-lycopene (71-83 μg/g DW and 14-25 μg/g DW as the main pigments, respectively. They also contained other carotenoids in much smaller amounts (lycoxanthin, zeaxanthin, anteraxanthin, lutein, -carotene, -carotene and phytofluene.

  6. In Interactive, Web-Based Approach to Metadata Authoring

    Science.gov (United States)

    Pollack, Janine; Wharton, Stephen W. (Technical Monitor)

    2001-01-01

    NASA's Global Change Master Directory (GCMD) serves a growing number of users by assisting the scientific community in the discovery of and linkage to Earth science data sets and related services. The GCMD holds over 8000 data set descriptions in Directory Interchange Format (DIF) and 200 data service descriptions in Service Entry Resource Format (SERF), encompassing the disciplines of geology, hydrology, oceanography, meteorology, and ecology. Data descriptions also contain geographic coverage information, thus allowing researchers to discover data pertaining to a particular geographic location, as well as subject of interest. The GCMD strives to be the preeminent data locator for world-wide directory level metadata. In this vein, scientists and data providers must have access to intuitive and efficient metadata authoring tools. Existing GCMD tools are not currently attracting. widespread usage. With usage being the prime indicator of utility, it has become apparent that current tools must be improved. As a result, the GCMD has released a new suite of web-based authoring tools that enable a user to create new data and service entries, as well as modify existing data entries. With these tools, a more interactive approach to metadata authoring is taken, as they feature a visual "checklist" of data/service fields that automatically update when a field is completed. In this way, the user can quickly gauge which of the required and optional fields have not been populated. With the release of these tools, the Earth science community will be further assisted in efficiently creating quality data and services metadata. Keywords: metadata, Earth science, metadata authoring tools

  7. Kuchler Vegetation

    Data.gov (United States)

    California Natural Resource Agency — Digital version of potential natural plant communites as compiled and published on 'Map of the Natural Vegetation of California' by A. W. Kuchler, 1976. Source map...

  8. Wieslander Vegetation

    Data.gov (United States)

    California Natural Resource Agency — Digital version of the 1945 California Vegetation Type Maps by A. E. Wieslander of the U.S. Forest Service. Source scale of maps are 1:100,000. These compiled maps...

  9. Genome-wide identification and expression profiling of tomato Hsp20 gene family in response to biotic and abiotic stresses

    Directory of Open Access Journals (Sweden)

    jiahong yu

    2016-08-01

    Full Text Available The Hsp20 genes are involved in the response of plants to environment stresses including heat shock and also play a vital role in plant growth and development. They represent the most abundant small heat shock proteins (sHsps in plants, but little is known about this family in tomato (Solanum lycopersicum, an important vegetable crop in the world. Here, we characterized heat shock protein 20 (SlHsp20 gene family in tomato through integration of gene structure, chromosome location, phylogenetic relationship and expression profile. Using bioinformatics-based methods, we identified at least 42 putative SlHsp20 genes in tomato. Sequence analysis revealed that most of SlHsp20 genes possessed no intron or a relatively short intron in length. Chromosome mapping indicated that inter-arm and intra-chromosome duplication events contributed remarkably to the expansion of SlHsp20 genes. Phylogentic tree of Hsp20 genes from tomato and other plant species revealed that SlHsp20 genes were grouped into 13 subfamilies, indicating that these genes may have a common ancestor that generated diverse subfamilies prior to the mono-dicot split. In addition, expression analysis using RNA-seq in various tissues and developmental stages of cultivated tomato and the wild relative Solanum pimpinellifolium revealed that most of these genes (83% were expressed in at least one stage from at least one genotype. Out of 42 genes, 4 genes were expressed constitutively in almost all the tissues analyzed, implying that these genes might have specific housekeeping function in tomato cell under normal growth conditions. Two SlHsp20 genes displayed differential expression levels between cultivated tomato and S. pimpinellifolium in vegetative (leaf and root and reproductive organs (floral bud and flower, suggesting inter-species diversification for functional specialization during the process of domestication. Based on genome-wide microarray analysis, we showed that the transcript

  10. Genome-Wide Identification and Expression Profiling of Tomato Hsp20 Gene Family in Response to Biotic and Abiotic Stresses.

    Science.gov (United States)

    Yu, Jiahong; Cheng, Yuan; Feng, Kun; Ruan, Meiying; Ye, Qingjing; Wang, Rongqing; Li, Zhimiao; Zhou, Guozhi; Yao, Zhuping; Yang, Yuejian; Wan, Hongjian

    2016-01-01

    The Hsp20 genes are involved in the response of plants to environment stresses including heat shock and also play a vital role in plant growth and development. They represent the most abundant small heat shock proteins (sHsps) in plants, but little is known about this family in tomato (Solanum lycopersicum), an important vegetable crop in the world. Here, we characterized heat shock protein 20 (SlHsp20) gene family in tomato through integration of gene structure, chromosome location, phylogenetic relationship, and expression profile. Using bioinformatics-based methods, we identified at least 42 putative SlHsp20 genes in tomato. Sequence analysis revealed that most of SlHsp20 genes possessed no intron or a relatively short intron in length. Chromosome mapping indicated that inter-arm and intra-chromosome duplication events contributed remarkably to the expansion of SlHsp20 genes. Phylogentic tree of Hsp20 genes from tomato and other plant species revealed that SlHsp20 genes were grouped into 13 subfamilies, indicating that these genes may have a common ancestor that generated diverse subfamilies prior to the mono-dicot split. In addition, expression analysis using RNA-seq in various tissues and developmental stages of cultivated tomato and the wild relative Solanum pimpinellifolium revealed that most of these genes (83%) were expressed in at least one stage from at least one genotype. Out of 42 genes, 4 genes were expressed constitutively in almost all the tissues analyzed, implying that these genes might have specific housekeeping function in tomato cell under normal growth conditions. Two SlHsp20 genes displayed differential expression levels between cultivated tomato and S. pimpinellifolium in vegetative (leaf and root) and reproductive organs (floral bud and flower), suggesting inter-species diversification for functional specialization during the process of domestication. Based on genome-wide microarray analysis, we showed that the transcript levels of SlHsp20

  11. Accumulation of heavy metals by vegetables grown in mine wastes

    Energy Technology Data Exchange (ETDEWEB)

    Cobb, G.P.; Sands, K.; Waters, M.; Wixson, B.G.; Dorward-King, E.

    2000-03-01

    Lead, cadmium, arsenic, and zinc were quantified in mine wastes and in soils mixed with mine wastes. Metal concentrations were found to be heterogeneous in the wastes. Iceberg lettuce, Cherry Belle radishes, Roma bush beans, and Better Boy tomatoes were cultivated in mine wastes and in waste-amended soils. Lettuce and radishes had 100% survival in the 100% mine waste treatments compared to 0% and 25% survival for tomatoes and beans, respectively. Metal concentrations were determined in plant tissues to determine uptake and distribution of metals in the edible plant parts. Individual soil samples were collected beneath each plant to assess metal content in the immediate plant environment. This analysis verified heterogeneous metal content of the mine wastes. The four plant species effectively accumulated and translocated lead, cadmium, arsenic, and zinc. Tomato and bean plants contained the four metals mainly in the roots and little was translocated to the fruits. Radish roots accumulated less metals compared to the leaves, whereas lettuce roots and leaves accumulated similar concentrations of the four metals. Lettuce leaves and radish roots accumulated significantly more metals than bean and tomato fruits. This accumulation pattern suggests that consumption of lettuce leaves or radish roots from plants grown in mine wastes would pose greater risks to humans and wildlife than would consumption of beans or tomatoes grown in the same area. The potential risk may be mitigated somewhat in humans, as vegetables grown in mine wastes exhibited stunted growth and chlorosis.

  12. SM4AM: A Semantic Metamodel for Analytical Metadata

    DEFF Research Database (Denmark)

    Varga, Jovan; Romero, Oscar; Pedersen, Torben Bach

    2014-01-01

    Next generation BI systems emerge as platforms where traditional BI tools meet semi-structured and unstructured data coming from the Web. In these settings, the user-centric orientation represents a key characteristic for the acceptance and wide usage by numerous and diverse end users in their data....... We present SM4AM, a Semantic Metamodel for Analytical Metadata created as an RDF formalization of the Analytical Metadata artifacts needed for user assistance exploitation purposes in next generation BI systems. We consider the Linked Data initiative and its relevance for user assistance...

  13. The Benefits and Future of Standards: Metadata and Beyond

    Science.gov (United States)

    Stracke, Christian M.

    This article discusses the benefits and future of standards and presents the generic multi-dimensional Reference Model. First the importance and the tasks of interoperability as well as quality development and their relationship are analyzed. Especially in e-Learning their connection and interdependence is evident: Interoperability is one basic requirement for quality development. In this paper, it is shown how standards and specifications are supporting these crucial issues. The upcoming ISO metadata standard MLR (Metadata for Learning Resource) will be introduced and used as example for identifying the requirements and needs for future standardization. In conclusion a vision of the challenges and potentials for e-Learning standardization is outlined.

  14. Performance of Tomato with Organic Manures in Plastic Tunnel

    Directory of Open Access Journals (Sweden)

    Shova Shrestha

    2018-05-01

    Full Text Available Tomato is one of the most demanded vegetable with increasing trend of commercial cultivation in Nepal. As it is the heavy feeder crop thus soil nutrient management has been always challenging. Since, in modern world organic production has been favored by consumers for many reasons thus we aimed to compare the efficacy of various compost, mineral fertilizers and their combinations in tomato production and soil productivity. For the purpose a field experiment in plastic tunnel was carried out in Horticulture Research Division, Khumaltar in two consecutive years (2014 and 2015. Srijana, a popular tomato hybrid among commercial producers, was purposively selected. Eight treatments (control, recommended doses of chemical fertilizers, compost 15 t ha-1 + cattle urine, compost 10 t ha-1 + cattle urine, compost 12.5 t ha-1 + cattle urine, compost 15 t ha-1 + 1/4 recommended dose of chemical fertilizers, compost 10 t ha-1 + ¾ recommended dose of chemical fertilizer and compost 12.5 t ha-1 + 1/2 recommended dose of chemical fertilizer were laid out in randomized complete block design and replicated thrice. The result showed significant (p < 0.05 positive correlation between the plant height and yield of tomato. The treatment with compost dose of 12.5 t ha-1 with half dose of recommended dose of chemical fertilizers produced the highest incremental yield (85% increment over other treatments followed by compost 15 t ha-1 with cattle urine. Addition of soil organic carbon, soil nitrogen, soil potassium by the increasing level of compost though not significant, but increment in carbon content, nitrogen content and potassium content of soil observed in successive years. For commercial producer at plastic tunnel, compost at the rate 12.5 t ha-1 with half dose of recommended level of chemical fertilizer (100:90:40 kg N:P:K ha-1 is recommended to apply in field, while for organic producer, application of 15 tha-1 compost with fermented cattle urine is

  15. The potentiality of depleted water to modify the tomatoes

    International Nuclear Information System (INIS)

    Butnaru, Gallia; Blidar, A.; Titescu, Gh.; Stefanescu, I.

    2004-01-01

    The possibility to improve the tomatoes bio-productivity parameters was tested using H 2 O-d and deuterium depleted water (DDW). There are presented the results obtained by seeds moisten before sowing. The plants vegetation until the first harvest and the fruits production and quality were studied. Making use of DDW has the following advantages: -accessibility, as the practical work is easy and economical; - nonpolluting, making use of the plants own bio-productive resources thus promoting the ecological agriculture. The effects registered during the experiments are: - seeds germination rhythm was faster in DDW conditions; - plants productivity was increased; - the capacity of light energetic convertibility was enhanced in the stress condition; - DDW seems to act as a 'helper' in the critical life cycle periods. (authors)

  16. Tree tomato water requirements determined by neutron probe

    International Nuclear Information System (INIS)

    1994-01-01

    The dynamics of water was studied at ''La Tola'', experimental teaching center of the Central University of Ecuador, in a sandy-loan, typic durustoll soil in which trees tomato were growing. All the components of the crop water balance were determined. Real evapotranspiration (ETR) was estimated through the mass balance method, using every 5-10 days a neutron probe to access the volumetric humidity of the soil. The real evapotranspiration was in direct relation with the growth of the crop, reaching its maximum value of 3,8 mm day-1, at vegetative stage. The soil layer supplying most of the water for the consumptive use of the crop was between 0-40 cm being the root activity also greater in that layer

  17. Linked data for libraries, archives and museums how to clean, link and publish your metadata

    CERN Document Server

    Hooland, Seth van

    2014-01-01

    This highly practical handbook teaches you how to unlock the value of your existing metadata through cleaning, reconciliation, enrichment and linking and how to streamline the process of new metadata creation. Libraries, archives and museums are facing up to the challenge of providing access to fast growing collections whilst managing cuts to budgets. Key to this is the creation, linking and publishing of good quality metadata as Linked Data that will allow their collections to be discovered, accessed and disseminated in a sustainable manner. This highly practical handbook teaches you how to unlock the value of your existing metadata through cleaning, reconciliation, enrichment and linking and how to streamline the process of new metadata creation. Metadata experts Seth van Hooland and Ruben Verborgh introduce the key concepts of metadata standards and Linked Data and how they can be practically applied to existing metadata, giving readers the tools and understanding to achieve maximum results with limited re...

  18. The effect of the lenght of storage on the amount of lycopene in the fruits of tomato (Lycopersicon esculentum L.

    Directory of Open Access Journals (Sweden)

    Anton Uher

    2008-01-01

    Full Text Available We focused on tomatoes for industrial processing due to its economical importance for its lycopene content. The objective of our research is to find the variation of lycopene content in tomato fruits depending upon the length of after harvest storage and thermic treatment, which is inevitable when being industrialy processed. From the point of view of nutritional qualities the most relevant contentual substance of tomatos are carotenoids, included lycopene.At average for tree following experimental years we learnt significant differences regarding the content of lycopene and the length of storage of tomato fruits. Immediately after the harvest and proccesing tomato fruits contained, at average for tree years, 103.24 mg of lycopene. After 14 days the content of lycopene declined to 46.76 mg . kg−1 of fresh mass. After 30 days the average value dropped to 29.26 mg . kg−1. This fact comfirms that boiling respectively thermic treatment increases the content of lycopene in tomato fruits, particulary in our experiment to the value 83.33 mg . kg−1. At varieties Ladislav, Peto 86, Prémium, Salus the content of lycopene has even risen in comparison with its content up to 48 hours after the harvest. Tomato (Lycopersicon esculentum L. belongs to the most signifficant vegetable varieties either for its exploitation in processing industry as well as for its nutritional value with extraordinary beneficial effect for human organism.Although the content of lycopene is genetically stable attribute, its content in our experiment ranged from 45.39 mg . kg−1 (Prémium variety to 77.98 mg . kg−1 (Zámčan variety, which are significant differences.

  19. Dyniqx: a novel meta-search engine for metadata based cross search

    OpenAIRE

    Zhu, Jianhan; Song, Dawei; Eisenstadt, Marc; Barladeanu, Cristi; Rüger, Stefan

    2008-01-01

    The effect of metadata in collection fusion has not been sufficiently studied. In response to this, we present a novel meta-search engine called Dyniqx for metadata based cross search. Dyniqx exploits the availability of metadata in academic search services such as PubMed and Google Scholar etc for fusing search results from heterogeneous search engines. In addition, metadata from these search engines are used for generating dynamic query controls such as sliders and tick boxes etc which are ...

  20. Fast processing of digital imaging and communications in medicine (DICOM) metadata using multiseries DICOM format

    OpenAIRE

    Ismail, Mahmoud; Philbin, James

    2015-01-01

    The digital imaging and communications in medicine (DICOM) information model combines pixel data and its metadata in a single object. There are user scenarios that only need metadata manipulation, such as deidentification and study migration. Most picture archiving and communication system use a database to store and update the metadata rather than updating the raw DICOM files themselves. The multiseries DICOM (MSD) format separates metadata from pixel data and eliminates duplicate attributes...

  1. Collaborative Metadata Curation in Support of NASA Earth Science Data Stewardship

    Science.gov (United States)

    Sisco, Adam W.; Bugbee, Kaylin; le Roux, Jeanne; Staton, Patrick; Freitag, Brian; Dixon, Valerie

    2018-01-01

    Growing collection of NASA Earth science data is archived and distributed by EOSDIS’s 12 Distributed Active Archive Centers (DAACs). Each collection and granule is described by a metadata record housed in the Common Metadata Repository (CMR). Multiple metadata standards are in use, and core elements of each are mapped to and from a common model – the Unified Metadata Model (UMM). Work done by the Analysis and Review of CMR (ARC) Team.

  2. Postharvest fungal deterioration of tomato ( Lycopersicum ...

    African Journals Online (AJOL)

    Journal Home · ABOUT THIS JOURNAL · Advanced Search · Current Issue · Archives ... tomatoes and pepper were sourced from Mile 12 Market in Lagos state. ... the ingestion of mycotoxins that are usually associated with fungal species), ...

  3. Fertilizers applied to certified organic tomato culture

    International Nuclear Information System (INIS)

    Martins, T.C.G.; De Nadai Fernandes, E.A.; Ferrari, A.A.; Bacchi, M.A.; Tagliaferro, F.S.

    2010-01-01

    The tomato culture demands large quantities of mineral nutrients, which are supplied by synthetic fertilizers in the conventional cultivation system. In the organic cultivation system only alternative fertilizers are allowed by the certifiers and accepted as safe for humans and environment. The chemical composition of rice bran, oyster flour, cattle manure and ground charcoal, as well as soils and tomato fruits were evaluated by instrumental neutron activation analysis (INAA). The potential contribution of organic fertilizers to the enrichment of chemical elements in soil and their transfer to fruits was investigated using concentration ratios for fertilizer and soil samples, and also for soil and tomato. Results evidenced that these alternative fertilizers could be taken as important sources of Br, Ca, Ce, K, Na and Zn for the organic tomato culture. (author)

  4. Callus formation and organogenesis of tomato (Lycopersicon ...

    African Journals Online (AJOL)

    USER

    2010-07-12

    Jul 12, 2010 ... propagated plants upon transfer to soil under natural conditions. ... Effect of high temperature and heat shock on tomato (Lycopersicon esculentum Mill) genotypes .... Modulation of mineral and fatty acid profiles during ...

  5. (edta) on the germination of tomato

    African Journals Online (AJOL)

    Dr A.B.Ahmed

    response of plant to salinity stress varies according to plant ... National Horticultural Research Institute (NIHORT), Ibadan, Oyo. State .... the work of Mgbeze et al. ... accumulation of four tomato cultivars. American. Journal of Plant Physiology, ...

  6. Tomato leaves methanol extract possesses anti- inflammatory ...

    African Journals Online (AJOL)

    GREGORY

    2011-12-16

    Dec 16, 2011 ... demonstrated, the anti-inflammatory effect of tomato leaves and its associated molecular mechanisms have not yet .... dissolved in 10% of culture-grade dimethylsulfoxide (DMSO; Sigma-. Aldrich .... In Vitro Cell. Dev. Biol.

  7. Turkish tomato greenhouse gets geothermal heating

    NARCIS (Netherlands)

    Sikkema, A.; Maaswinkel, R.H.M.

    2011-01-01

    Wageningen UR Greenhouse Horticulture will set up an ultramodern greenhouse in Turkey, together with Dutch greenhouse builders and contractors. Geothermal energy will be used there to provide heat and carbon dioxide for tomato cultivation.

  8. Combination of ozone and packaging treatments maintained the quality and improved the shelf life of tomato fruit

    Science.gov (United States)

    Zainuri; Jayaputra; Sauqi, A.; Sjah, T.; Desiana, R. Y.

    2018-01-01

    Tomato is very important vegetable crop but has short shelf life. The objective of this research was to determine the effect of ozone and packaging combination treatment on the quality and the storage life of tomato fruit. There were six treatments including: control (without ozone and packaging); without ozone and packaged with polyethylene bag; without ozone and polyethylene terephtalate punnet; with ozone but without packaging; with ozone and packaged with polyethylene bag; and with ozone and polyethylene terephtalate punnet. Each treatment was made into 3 replications. Tomato samples were harvested at turning stage. Ozone treatment was applied for 60 seconds. Tomatoes were then treated with and without packaging. The fruit were then stored at room temperature for up to 12 days. The parameters for assessment were water content, color, texture, weight loss and the population of naturally contamination Escherichia coli. Each parameter was assessed on day 0, 6 and 12 of storage. The results indicated that combination of ozone and packaging treatments significantly affected the physical and biochemical changes (water content, color, texture and weight loss) of the fruit, suppressed the microbiological contamination on the fruit and maintained fruit freshness or quality after 12 days of storage. The combination of ozone and perforated polyethylene packaging treatment was the best treatment to maintain the quality and prolonged the shelf life of tomato fruit to be 12 days at room temperature.

  9. A Post-Harvest Prediction Mass Loss Model for Tomato Fruit Using A Numerical Methodology Centered on Approximation Error Minimization

    Directory of Open Access Journals (Sweden)

    Francisco Javier Bucio

    2017-10-01

    Full Text Available Due to its nutritional and economic value, the tomato is considered one of the main vegetables in terms of production and consumption in the world. For this reason, an important case study is the fruit maturation parametrized by its mass loss in this study. This process develops in the fruit mainly after harvest. Since that parameter affects the economic value of the crop, the scientific community has been progressively approaching the issue. However, there is no a state-of-the-art practical model allowing the prediction of the tomato fruit mass loss yet. This study proposes a prediction model for tomato mass loss in a continuous and definite time-frame using regression methods. The model is based on a combination of adjustment methods such as least squares polynomial regression leading to error estimation, and cross validation techniques. Experimental results from a 50 fruit of tomato sample studied over a 54 days period were compared to results from the model using a second-order polynomial approach found to provide optimal data fit with a resulting efficiency of ~97%. The model also allows the design of precise logistic strategies centered on post-harvest tomato mass loss prediction usable by producers, distributors, and consumers.

  10. Metadata capture in an electronic notebook: How to make it as simple as possible?

    Directory of Open Access Journals (Sweden)

    Menzel, Julia

    2015-09-01

    Full Text Available In the last few years electronic laboratory notebooks (ELNs have become popular. ELNs offer the great possibility to capture metadata automatically. Due to the high documentation effort metadata documentation is neglected in science. To close the gap between good data documentation and high documentation effort for the scientists a first user-friendly solution to capture metadata in an easy way was developed.At first, different protocols for the Western Blot were collected within the Collaborative Research Center 1002 and analyzed. Together with existing metadata standards identified in a literature search a first version of the metadata scheme was developed. Secondly, the metadata scheme was customized for future users including the implementation of default values for automated metadata documentation.Twelve protocols for the Western Blot were used to construct one standard protocol with ten different experimental steps. Three already existing metadata standards were used as models to construct the first version of the metadata scheme consisting of 133 data fields in ten experimental steps. Through a revision with future users the final metadata scheme was shortened to 90 items in three experimental steps. Using individualized default values 51.1% of the metadata can be captured with present values in the ELN.This lowers the data documentation effort. At the same time, researcher could benefit by providing standardized metadata for data sharing and re-use.

  11. PRODUCTION AND MARKETABILITY OF CONVENTIONAL, SUSTAINABLE AND ORGANIC PRODUCED TOMATOES

    Directory of Open Access Journals (Sweden)

    Dean BAN

    2007-07-01

    Full Text Available Conventional agricultural production is denoted by high levels of chemisation, strait specialised production, high yields and low costs per production unit, however this production causes risky interventions, which could affect negatively on environment and human health Research results indicate possibilities for growing vegetables in alternative systems, less risky for environment with satisfying economic success. The aim of this research was to determine economic success of organic, sustainable and conventional production of tomato in the Mediterranean area of Republic Croatia. Bianual research was conducted during 2002/2003. During vegetation we examined parameters of growth, marketable yields and costs for materials, work and machinery which are used in economic analysis. Economical analysis of tomatoes production indicate worst results in organic production system. Loses in tomatoes organic production were consequences of two main factors: lower marketed yield and equal product price for all three production types. Lower yields in organic production were expected, therefore bad financial results were caused by mainly low market prices, which do not validate quality and food safety. Therefore financial success is preconditioned by higher market validation, which can be obtained through market analysis and product development. Consumer awareness about organic agriculture is still very weak and this point requires further attention. The link between organic agriculture and the environment/nature protection is missing too. The purchase of organic food is influenced by the level of information and knowledge of consumers with reference to these products. Doubts about the truthfulness and significance of some data were raised by main places where organic food is purchased, since an excessive greatest limitations are high prices and a low level of information to consumers. Current standard of life of most Croatian consumers does not permit them to

  12. Impact of FFS on farmer's adoption of IPM options for tomato: A case study from the Gezira State, Sudan

    Directory of Open Access Journals (Sweden)

    Ahmed Mirghani Abdel Rahman

    2012-09-01

    Full Text Available In Sudan pests and diseases are the major problem of vegetables production. Tomato crop is considered as the most important vegetable crop in the country according to its economic and nutrition value. There are many pest and diseases retarding tomato production such as whitefly, American bollworm, TYLCV and powdery mildew. Therefore some IPM options for tomato and onion were validated in FFS in order to help farmers in controlling the most important pests and diseases. The main objective of this study was to determine the impact of FFS on farmer's adoption of IPM options for tomato in the Gezira State, Sudan. Field survey was used to collect data from three Farmer Field Schools in the Gezira State namely: Um Dagarsi, Hantoub and Faris in the 2009/2010 growing season. All FFS participants were used, i.e. 30 FFS- participants from each school. Equal number of non-FFS participants (90 was used for comparison, by using the simple random sampling technique. The collected data were statistically analyzed and interpreted using percentage, frequency distribution and chi-square test. The results showed that the FFS schools were positively affected farmer's adoption of IPM options for tomato. It can be concluded that the FFS approach is very efficient in the transfer of farm technology for vegetable farmers through their participation in various activities of FFS schools. Thus, FFS approach must become national policy, share authority of extension organizations in control and execution of FFS activities with farmer unions for more effective participations of clientele in all activities of the schools and More efforts should be exerted in distribution of all inputs to farmers with reasonable prices through various agricultural centres.

  13. Using NDVI and guided sampling to develop yield prediction maps of processing tomato crop

    Energy Technology Data Exchange (ETDEWEB)

    Fortes, A.; Henar Prieto, M. del; García-Martín, A.; Córdoba, A.; Martínez, L.; Campillo, C.

    2015-07-01

    The use of yield prediction maps is an important tool for the delineation of within-field management zones. Vegetation indices based on crop reflectance are of potential use in the attainment of this objective. There are different types of vegetation indices based on crop reflectance, the most commonly used of which is the NDVI (normalized difference vegetation index). NDVI values are reported to have good correlation with several vegetation parameters including the ability to predict yield. The field research was conducted in two commercial farms of processing tomato crop, Cantillana and Enviciados. An NDVI prediction map developed through ordinary kriging technique was used for guided sampling of processing tomato yield. Yield was studied and related with NDVI, and finally a prediction map of crop yield for the entire plot was generated using two geostatistical methodologies (ordinary and regression kriging). Finally, a comparison was made between the yield obtained at validation points and the yield values according to the prediction maps. The most precise yield maps were obtained with the regression kriging methodology with RRMSE values of 14% and 17% in Cantillana and Enviciados, respectively, using the NDVI as predictor. The coefficient of correlation between NDVI and yield was correlated in the point samples taken in the two locations, with values of 0.71 and 0.67 in Cantillana and Enviciados, respectively. The results suggest that the use of a massive sampling parameter such as NDVI is a good indicator of the distribution of within-field yield variation. (Author)

  14. Metadata Harvesting in Regional Digital Libraries in the PIONIER Network

    Science.gov (United States)

    Mazurek, Cezary; Stroinski, Maciej; Werla, Marcin; Weglarz, Jan

    2006-01-01

    Purpose: The paper aims to present the concept of the functionality of metadata harvesting for regional digital libraries, based on the OAI-PMH protocol. This functionality is a part of regional digital libraries platform created in Poland. The platform was required to reach one of main objectives of the Polish PIONIER Programme--to enrich the…

  15. Metadata Quality Improvement : DASISH deliverable 5.2A

    NARCIS (Netherlands)

    L'Hours, Hervé; Offersgaard, Lene; Wittenberg, M.; Wloka, Bartholomäus

    2014-01-01

    The aim of this task was to analyse and compare the different metadata strategies of CLARIN, DARIAH and CESSDA, and to identify possibilities of cross-fertilization to take profit from each other solutions where possible. To have a better understanding in which stages of the research lifecycle

  16. Competence Based Educational Metadata for Supporting Lifelong Competence Development Programmes

    NARCIS (Netherlands)

    Sampson, Demetrios; Fytros, Demetrios

    2008-01-01

    Sampson, D., & Fytros, D. (2008). Competence Based Educational Metadata for Supporting Lifelong Competence Development Programmes. In P. Diaz, Kinshuk, I. Aedo & E. Mora (Eds.), Proceedings of the 8th IEEE International Conference on Advanced Learning Technologies (ICALT 2008), pp. 288-292. July,

  17. Metadata Schema Used in OCLC Sampled Web Pages

    Directory of Open Access Journals (Sweden)

    Fei Yu

    2005-12-01

    Full Text Available The tremendous growth of Web resources has made information organization and retrieval more and more difficult. As one approach to this problem, metadata schemas have been developed to characterize Web resources. However, many questions have been raised about the use of metadata schemas such as which metadata schemas have been used on the Web? How did they describe Web accessible information? What is the distribution of these metadata schemas among Web pages? Do certain schemas dominate the others? To address these issues, this study analyzed 16,383 Web pages with meta tags extracted from 200,000 OCLC sampled Web pages in 2000. It found that only 8.19% Web pages used meta tags; description tags, keyword tags, and Dublin Core tags were the only three schemas used in the Web pages. This article revealed the use of meta tags in terms of their function distribution, syntax characteristics, granularity of the Web pages, and the length distribution and word number distribution of both description and keywords tags.

  18. A metadata schema for data objects in clinical research.

    Science.gov (United States)

    Canham, Steve; Ohmann, Christian

    2016-11-24

    A large number of stakeholders have accepted the need for greater transparency in clinical research and, in the context of various initiatives and systems, have developed a diverse and expanding number of repositories for storing the data and documents created by clinical studies (collectively known as data objects). To make the best use of such resources, we assert that it is also necessary for stakeholders to agree and deploy a simple, consistent metadata scheme. The relevant data objects and their likely storage are described, and the requirements for metadata to support data sharing in clinical research are identified. Issues concerning persistent identifiers, for both studies and data objects, are explored. A scheme is proposed that is based on the DataCite standard, with extensions to cover the needs of clinical researchers, specifically to provide (a) study identification data, including links to clinical trial registries; (b) data object characteristics and identifiers; and (c) data covering location, ownership and access to the data object. The components of the metadata scheme are described. The metadata schema is proposed as a natural extension of a widely agreed standard to fill a gap not tackled by other standards related to clinical research (e.g., Clinical Data Interchange Standards Consortium, Biomedical Research Integrated Domain Group). The proposal could be integrated with, but is not dependent on, other moves to better structure data in clinical research.

  19. Standardizing metadata and taxonomic identification in metabarcoding studies

    NARCIS (Netherlands)

    Tedersoo, Leho; Ramirez, Kelly; Nilsson, R; Kaljuvee, Aivi; Koljalg, Urmas; Abarenkov, Kessy

    2015-01-01

    High-throughput sequencing-based metabarcoding studies produce vast amounts of ecological data, but a lack of consensus on standardization of metadata and how to refer to the species recovered severely hampers reanalysis and comparisons among studies. Here we propose an automated workflow covering

  20. The evolution of chondrichthyan research through a metadata ...

    African Journals Online (AJOL)

    We compiled metadata from Sharks Down Under (1991) and the two Sharks International conferences (2010 and 2014), spanning 23 years. Analysis of the data highlighted taxonomic biases towards charismatic species, a declining number of studies in fundamental science such as those related to taxonomy and basic life ...

  1. Transforming and enhancing metadata for enduser discovery: a case study

    Directory of Open Access Journals (Sweden)

    Edward M. Corrado

    2014-05-01

    The Libraries’ workflow and portions of code will be shared; issues and challenges involved will be discussed. While this case study is specific to Binghamton University Libraries, examples of strategies used at other institutions will also be introduced. This paper should be useful to anyone interested in describing large quantities of photographs or other materials with preexisting embedded metadata.

  2. Training and Best Practice Guidelines: Implications for Metadata Creation

    Science.gov (United States)

    Chuttur, Mohammad Y.

    2012-01-01

    In response to the rapid development of digital libraries over the past decade, researchers have focused on the use of metadata as an effective means to support resource discovery within online repositories. With the increasing involvement of libraries in digitization projects and the growing number of institutional repositories, it is anticipated…

  3. MMI's Metadata and Vocabulary Solutions: 10 Years and Growing

    Science.gov (United States)

    Graybeal, J.; Gayanilo, F.; Rueda-Velasquez, C. A.

    2014-12-01

    The Marine Metadata Interoperability project (http://marinemetadata.org) held its public opening at AGU's 2004 Fall Meeting. For 10 years since that debut, the MMI guidance and vocabulary sites have served over 100,000 visitors, with 525 community members and continuous Steering Committee leadership. Originally funded by the National Science Foundation, over the years multiple organizations have supported the MMI mission: "Our goal is to support collaborative research in the marine science domain, by simplifying the incredibly complex world of metadata into specific, straightforward guidance. MMI encourages scientists and data managers at all levels to apply good metadata practices from the start of a project, by providing the best guidance and resources for data management, and developing advanced metadata tools and services needed by the community." Now hosted by the Harte Research Institute at Texas A&M University at Corpus Christi, MMI continues to provide guidance and services to the community, and is planning for marine science and technology needs for the next 10 years. In this presentation we will highlight our major accomplishments, describe our recent achievements and imminent goals, and propose a vision for improving marine data interoperability for the next 10 years, including Ontology Registry and Repository (http://mmisw.org/orr) advancements and applications (http://mmisw.org/cfsn).

  4. Metafier - a Tool for Annotating and Structuring Building Metadata

    DEFF Research Database (Denmark)

    Holmegaard, Emil; Johansen, Aslak; Kjærgaard, Mikkel Baun

    2017-01-01

    in achieving this goal, but often they work as silos. Improving at scale the energy performance of buildings depends on applications breaking these silos and being portable among buildings. To enable portable building applications, the building instrumentation should be supported by a metadata layer...

  5. Big Earth Data Initiative: Metadata Improvement: Case Studies

    Science.gov (United States)

    Kozimor, John; Habermann, Ted; Farley, John

    2016-01-01

    Big Earth Data Initiative (BEDI) The Big Earth Data Initiative (BEDI) invests in standardizing and optimizing the collection, management and delivery of U.S. Government's civil Earth observation data to improve discovery, access use, and understanding of Earth observations by the broader user community. Complete and consistent standard metadata helps address all three goals.

  6. Modelling the Survival of Escherichia coli O157:H7 on Raw Portioned Tomatoes, Inoculated with Aspergillus fumigatus and Emericella nidulans

    Directory of Open Access Journals (Sweden)

    Daniela Cardillo

    2009-01-01

    The results of this paper suggested that the metabiotic interactions aspergilli/E. coli O 157:H7 could be of public concern, as the consumption of tomatoes (or other fruits and vegetables contaminated both by the moulds and the pathogen is a possible scenario.

  7. Comparative energy input–output and financial analyses of greenhouse and open field vegetables production in West Java, Indonesia

    International Nuclear Information System (INIS)

    Kuswardhani, Nita; Soni, Peeyush; Shivakoti, Ganesh P.

    2013-01-01

    This paper estimates energy consumption per unit floor area of greenhouse and open field for tomato, chili and lettuce production. Primary data were collected from 530 vegetable farmers during Jan–Dec, 2010 in West Java, Indonesia. Energy estimates were calculated from actual amount of inputs and outputs and corresponding conversion factors. Results reveal that the total input energy used in greenhouse (GH) production of tomato, chili (medium and high land) and lettuce were 47.62, 41.55, 58.84, and 24.54 GJ/ha respectively. Whereas, the requirement of total input energy for open field (OF) production of tomato, chili (medium and high land) and lettuce were 49.01, 41.04, 57.94 and 23.87 GJ/ha, respectively. The ratio of output to input energy was higher in greenhouse production (0.85, 0.45 and 0.49) than open field vegetable production (0.52, 0.175 and 0.186) for tomato, chili medium land and chili highland, respectively, but output–input ratio of lettuce open field production was twice as that of greenhouse vegetable production. Financial analysis revealed higher mean net returns from greenhouse vegetable production as 7043 $/ha (922–15,299 $/ha) when compared to 571 $/ha (44–1172 $/ha) from open field vegetable production. Among the greenhouse vegetables, tomato cultivation was the most profitable in terms of energy efficiency and financial productivity. - Highlights: ► Energy input–output analysis is carried out to compare vegetables production in greenhouse and open field. ► Tomato, Chili and Lettuce production in West Java, Indonesia. ► Economic analysis is conducted to compare the two production systems

  8. Provenance metadata gathering and cataloguing of EFIT++ code execution

    International Nuclear Information System (INIS)

    Lupelli, I.; Muir, D.G.; Appel, L.; Akers, R.; Carr, M.; Abreu, P.

    2015-01-01

    Highlights: • An approach for automatic gathering of provenance metadata has been presented. • A provenance metadata catalogue has been created. • The overhead in the code runtime is less than 10%. • The metadata/data size ratio is about ∼20%. • A visualization interface based on Gephi, has been presented. - Abstract: Journal publications, as the final product of research activity, are the result of an extensive complex modeling and data analysis effort. It is of paramount importance, therefore, to capture the origins and derivation of the published data in order to achieve high levels of scientific reproducibility, transparency, internal and external data reuse and dissemination. The consequence of the modern research paradigm is that high performance computing and data management systems, together with metadata cataloguing, have become crucial elements within the nuclear fusion scientific data lifecycle. This paper describes an approach to the task of automatically gathering and cataloguing provenance metadata, currently under development and testing at Culham Center for Fusion Energy. The approach is being applied to a machine-agnostic code that calculates the axisymmetric equilibrium force balance in tokamaks, EFIT++, as a proof of principle test. The proposed approach avoids any code instrumentation or modification. It is based on the observation and monitoring of input preparation, workflow and code execution, system calls, log file data collection and interaction with the version control system. Pre-processing, post-processing, and data export and storage are monitored during the code runtime. Input data signals are captured using a data distribution platform called IDAM. The final objective of the catalogue is to create a complete description of the modeling activity, including user comments, and the relationship between data output, the main experimental database and the execution environment. For an intershot or post-pulse analysis (∼1000

  9. Provenance metadata gathering and cataloguing of EFIT++ code execution

    Energy Technology Data Exchange (ETDEWEB)

    Lupelli, I., E-mail: ivan.lupelli@ccfe.ac.uk [CCFE, Culham Science Centre, Abingdon, Oxon OX14 3DB (United Kingdom); Muir, D.G.; Appel, L.; Akers, R.; Carr, M. [CCFE, Culham Science Centre, Abingdon, Oxon OX14 3DB (United Kingdom); Abreu, P. [Instituto de Plasmas e Fusão Nuclear, Instituto Superior Técnico, Universidade de Lisboa, 1049-001 Lisboa (Portugal)

    2015-10-15

    Highlights: • An approach for automatic gathering of provenance metadata has been presented. • A provenance metadata catalogue has been created. • The overhead in the code runtime is less than 10%. • The metadata/data size ratio is about ∼20%. • A visualization interface based on Gephi, has been presented. - Abstract: Journal publications, as the final product of research activity, are the result of an extensive complex modeling and data analysis effort. It is of paramount importance, therefore, to capture the origins and derivation of the published data in order to achieve high levels of scientific reproducibility, transparency, internal and external data reuse and dissemination. The consequence of the modern research paradigm is that high performance computing and data management systems, together with metadata cataloguing, have become crucial elements within the nuclear fusion scientific data lifecycle. This paper describes an approach to the task of automatically gathering and cataloguing provenance metadata, currently under development and testing at Culham Center for Fusion Energy. The approach is being applied to a machine-agnostic code that calculates the axisymmetric equilibrium force balance in tokamaks, EFIT++, as a proof of principle test. The proposed approach avoids any code instrumentation or modification. It is based on the observation and monitoring of input preparation, workflow and code execution, system calls, log file data collection and interaction with the version control system. Pre-processing, post-processing, and data export and storage are monitored during the code runtime. Input data signals are captured using a data distribution platform called IDAM. The final objective of the catalogue is to create a complete description of the modeling activity, including user comments, and the relationship between data output, the main experimental database and the execution environment. For an intershot or post-pulse analysis (∼1000

  10. A Metadata Standard for Hydroinformatic Data Conforming to International Standards

    Science.gov (United States)

    Notay, Vikram; Carstens, Georg; Lehfeldt, Rainer

    2017-04-01

    The affordable availability of computing power and digital storage has been a boon for the scientific community. The hydroinformatics community has also benefitted from the so-called digital revolution, which has enabled the tackling of more and more complex physical phenomena using hydroinformatic models, instruments, sensors, etc. With models getting more and more complex, computational domains getting larger and the resolution of computational grids and measurement data getting finer, a large amount of data is generated and consumed in any hydroinformatics related project. The ubiquitous availability of internet also contributes to this phenomenon with data being collected through sensor networks connected to telecommunications networks and the internet long before the term Internet of Things existed. Although generally good, this exponential increase in the number of available datasets gives rise to the need to describe this data in a standardised way to not only be able to get a quick overview about the data but to also facilitate interoperability of data from different sources. The Federal Waterways Engineering and Research Institute (BAW) is a federal authority of the German Federal Ministry of Transport and Digital Infrastructure. BAW acts as a consultant for the safe and efficient operation of the German waterways. As part of its consultation role, BAW operates a number of physical and numerical models for sections of inland and marine waterways. In order to uniformly describe the data produced and consumed by these models throughout BAW and to ensure interoperability with other federal and state institutes on the one hand and with EU countries on the other, a metadata profile for hydroinformatic data has been developed at BAW. The metadata profile is composed in its entirety using the ISO 19115 international standard for metadata related to geographic information. Due to the widespread use of the ISO 19115 standard in the existing geodata infrastructure

  11. ONEMercury: Towards Automatic Annotation of Earth Science Metadata

    Science.gov (United States)

    Tuarob, S.; Pouchard, L. C.; Noy, N.; Horsburgh, J. S.; Palanisamy, G.

    2012-12-01

    Earth sciences have become more data-intensive, requiring access to heterogeneous data collected from multiple places, times, and thematic scales. For example, research on climate change may involve exploring and analyzing observational data such as the migration of animals and temperature shifts across the earth, as well as various model-observation inter-comparison studies. Recently, DataONE, a federated data network built to facilitate access to and preservation of environmental and ecological data, has come to exist. ONEMercury has recently been implemented as part of the DataONE project to serve as a portal for discovering and accessing environmental and observational data across the globe. ONEMercury harvests metadata from the data hosted by multiple data repositories and makes it searchable via a common search interface built upon cutting edge search engine technology, allowing users to interact with the system, intelligently filter the search results on the fly, and fetch the data from distributed data sources. Linking data from heterogeneous sources always has a cost. A problem that ONEMercury faces is the different levels of annotation in the harvested metadata records. Poorly annotated records tend to be missed during the search process as they lack meaningful keywords. Furthermore, such records would not be compatible with the advanced search functionality offered by ONEMercury as the interface requires a metadata record be semantically annotated. The explosion of the number of metadata records harvested from an increasing number of data repositories makes it impossible to annotate the harvested records manually, urging the need for a tool capable of automatically annotating poorly curated metadata records. In this paper, we propose a topic-model (TM) based approach for automatic metadata annotation. Our approach mines topics in the set of well annotated records and suggests keywords for poorly annotated records based on topic similarity. We utilize the

  12. Assessment of genetic diversity in tomato for fruit morphology, composition and yield

    International Nuclear Information System (INIS)

    Zaif, K.; Amjad, M.; Saeed, A.

    2016-01-01

    Postharvest losses are of great concern in vegetable crops, including tomato, due to their perishable nature. Damage to tomato fruit during transportation is related to its shape besides other factors. Therefore, this study was conducted to assess genetic diversity in the available tomato germplasm (35 genotypes) for fruit morphology, biochemical composition and yield. Considerable variation was observed for all studied traits except number of locules per fruit, TSS and reducing sugars, for which very low range was recorded. While, moderate level of variation existed for stem-end blockiness, blossom-end blockiness and elongated shape which suggested that fruit of most of the varieties could belong to more than one category of fruit shape. Fruit length and diameter had significantly positive correlation with heart shape of tomato, while later was also correlated with blossom-end-blockiness. Heart shape of tomato fruit was also correlated with stem-end blockiness. Yield showed significantly positive correlation with number of inflorescence per plant. Principal component analysis (PCA) revealed PC-I to PC-VI had Eigen values >1, which contributed 73.86% of total variability for different traits. The highest factor loading values for blossom-end-blockiness, stem-end-blockiness, heart shape and elongated shape was recorded in PC-6, PC-4, PC-6 and PC-2, respectively. Thirty five genotypes were grouped into three clusters. Higher yield and stem-end-blockiness was observed in genotypes from cluster II, while higher values for blossom-end-blockiness, heart shape and elongated shape were noticed in cluster I followed by cluster III. So, it can be assumed that genotypes in cluster II showed higher yield and also possessed blocky fruit, a desirable character for transportation and processing purpose. Moreover, it is suggested that genotypes of cluster I and cluster II can be crossed to find heterosis for yield and fruit shape related traits. (author)

  13. Antiviral Activity of Sukomycin Against Potato Virus Y And Tomato Mosaic Virus

    Directory of Open Access Journals (Sweden)

    Nikolay Petrov

    2016-12-01

    Full Text Available Potato virus Y (PVY and Tomato mosaic virus (ToMV are one of the most important plant viruses that strongly influence the quality and quantity of vegetable production and cause substantial losses to farmers. The most convetional and common method of pest and disease control is trough the use of pesticides. Unfortunately, most of them are synthetic compounds without antiviral activities and possess inherent toxicities that endanger the health of the farm operators, consumers and the environment. In order to carry out a control of viral infections in plants and to reduce the loss of production it is necessary the search for alternative and environmentally friendly methods for control. Sukomycin is a complex of substances with antimicrobial and antiviral activities produced from Streptomyces hygroscopicus isolated from soil. This natural complex reduces significantly symptoms and DAS-ELISA values of Potato virus Y and Tomato mosaic virus in tobacco plants.

  14. Radioactivity in tomatoes grown on mine tailings from Oka, a niobium mining region

    International Nuclear Information System (INIS)

    Boulet, M.; Boudreau, A.; Roy, J.C.

    1983-01-01

    The radioactivity contained in the tailings of a niobium mine in the Oka region, Quebec, was the object of concern for the population of the area in 1979. To find the impact of these tailings on fruit and vegetables grown in this environment, an investigation of the radioactivity found on tomatoes grown in green houses in niobium tailings and in vermiculites was undertaken. The tailings contained a high level of natural radioactivity and a small amount of 137 Cs while the vermiculites had a very low level of natural radioactivity and an appreciable amount of 137 Cs. Cesium-137 was the only nuclide detected in tomato ashes in measurable quantity. Absence of natural radioactivity is explained by its presence as insoluble minerals

  15. The measurement of radioactivity in tomatoes cultivated on mining residues from the Oka niobium mining community

    International Nuclear Information System (INIS)

    Boulet, M.; Boudreau, A.; Roy, J.C.

    1983-01-01

    The radioactivity contained in the tailings of a niobium mine in the Oka region, Quebec, was the object of concern for the population of the area in 1979. To find the impact of these tailings on fruit and vegetables grown in this environment, an investigation of the radioactivity found on tomatoes grown in green houses in niobium tailings and in vermiculites was undertaken. The tailings contained a high level of natural radioactivity and a small amount of 137 Cs while the vermiculites has a very low level of natural radioactivity and an appreciable amount of 137 Cs. Cesium-137 was the only nuclide detected in tomato ashes in measurable quantity. Absence of natural radioactivity is explained by its presence as insoluble minerals. (author) [fr

  16. Tomato Yield and Water Use Efficiency - Coupling Effects between Growth Stage Specific Soil Water Deficits

    DEFF Research Database (Denmark)

    Chen, Si; Zhenjiang, Zhou; Andersen, Mathias Neumann

    2015-01-01

    To investigate the sensitivity of tomato yield and water use efficiency (WUE) to soil water content at different growth stages, the central composite rotatable design (CCRD) was employed in a five-factor-five-level pot experiment under regulated deficit irrigation. Two regression models concerning...... the effects of stage-specific soil water content on tomato yield and WUE were established. The results showed that the lowest available soil water (ASW) content (around 28%) during vegetative growth stage (here denoted θ1) resulted in high yield and WUE. Moderate (around 69% ASW) during blooming and fruit...... effects of ASW in two growth stages were between θ2 and θ5, θ3. In both cases a moderate θ2 was a precondition for maximum yield response to increasing θ5 and θ3. Sensitivity analysis revealed that yield was most sensitive to soil water content at fruit maturity (θ5). Numerical inspection...

  17. Principal component analysis of tomato genotypes based on some morphological and biochemical quality indicators

    Directory of Open Access Journals (Sweden)

    Glogovac Svetlana

    2012-01-01

    Full Text Available This study investigates variability of tomato genotypes based on morphological and biochemical fruit traits. Experimental material is a part of tomato genetic collection from Institute of Filed and Vegetable Crops in Novi Sad, Serbia. Genotypes were analyzed for fruit mass, locule number, index of fruit shape, fruit colour, dry matter content, total sugars, total acidity, lycopene and vitamin C. Minimum, maximum and average values and main indicators of variability (CV and σ were calculated. Principal component analysis was performed to determinate variability source structure. Four principal components, which contribute 93.75% of the total variability, were selected for analysis. The first principal component is defined by vitamin C, locule number and index of fruit shape. The second component is determined by dry matter content, and total acidity, the third by lycopene, fruit mass and fruit colour. Total sugars had the greatest part in the fourth component.

  18. VEGETATION MAPPING IN WETLANDS

    Directory of Open Access Journals (Sweden)

    F. PEDROTTI

    2004-01-01

    Full Text Available The current work examines the main aspects of wetland vegetation mapping, which can be summarized as analysis of the ecological-vegetational (ecotone gradients; vegetation complexes; relationships between vegetation distribution and geomorphology; vegetation of the hydrographic basin lo which the wetland in question belongs; vegetation monitoring with help of four vegetation maps: phytosociological map of the real and potential vegetation, map of vegetation dynamical tendencies, map of vegetation series.

  19. ASDC Collaborations and Processes to Ensure Quality Metadata and Consistent Data Availability

    Science.gov (United States)

    Trapasso, T. J.

    2017-12-01

    With the introduction of new tools, faster computing, and less expensive storage, increased volumes of data are expected to be managed with existing or fewer resources. Metadata management is becoming a heightened challenge from the increase in data volume, resulting in more metadata records needed to be curated for each product. To address metadata availability and completeness, NASA ESDIS has taken significant strides with the creation of the United Metadata Model (UMM) and Common Metadata Repository (CMR). These UMM helps address hurdles experienced by the increasing number of metadata dialects and the CMR provides a primary repository for metadata so that required metadata fields can be served through a growing number of tools and services. However, metadata quality remains an issue as metadata is not always inherent to the end-user. In response to these challenges, the NASA Atmospheric Science Data Center (ASDC) created the Collaboratory for quAlity Metadata Preservation (CAMP) and defined the Product Lifecycle Process (PLP) to work congruently. CAMP is unique in that it provides science team members a UI to directly supply metadata that is complete, compliant, and accurate for their data products. This replaces back-and-forth communication that often results in misinterpreted metadata. Upon review by ASDC staff, metadata is submitted to CMR for broader distribution through Earthdata. Further, approval of science team metadata in CAMP automatically triggers the ASDC PLP workflow to ensure appropriate services are applied throughout the product lifecycle. This presentation will review the design elements of CAMP and PLP as well as demonstrate interfaces to each. It will show the benefits that CAMP and PLP provide to the ASDC that could potentially benefit additional NASA Earth Science Data and Information System (ESDIS) Distributed Active Archive Centers (DAACs).

  20. Impact of Manure Fertilization on the Abundance of Antibiotic-Resistant Bacteria and Frequency of Detection of Antibiotic Resistance Genes in Soil and on Vegetables at Harvest

    OpenAIRE

    Marti, Romain; Scott, Andrew; Tien, Yuan-Ching; Murray, Roger; Sabourin, Lyne; Zhang, Yun; Topp, Edward

    2013-01-01

    Consumption of vegetables represents a route of direct human exposure to bacteria found in soil. The present study evaluated the complement of bacteria resistant to various antibiotics on vegetables often eaten raw (tomato, cucumber, pepper, carrot, radish, lettuce) and how this might vary with growth in soil fertilized inorganically or with dairy or swine manure. Vegetables were sown into field plots immediately following fertilization and harvested when of marketable quality. Vegetable and ...

  1. INTEGRATED WEED MANAGEMENT ON THE PROCESSING TOMATO CROP AND TOMATO FOR CONSUMPTION IN NATURA

    Directory of Open Access Journals (Sweden)

    Y. O. Castro

    2016-11-01

    Full Text Available Weeds cause direct and indirect damage to processing tomato and tomato for consumption in natura. The coexistence period is decisive for the intensity of damage, although the economic cost is also considered for decision making when to control the weeds. There are similarities between processing tomato and tomato for consumption in natura cropping system and peculiarities. This causes the management has adopted its common applications and its variables within each system. As control alternative, the farmer has basically the preventive control, mechanical, cultural, biological and chemical. The application of a single method is not recommended. Ideally, the methods needs to be integrated in order to combat weeds, highly evolved populations and resistant to unfavorable conditions. Consider weed management taking only one control measure is to underestimate the evolutionary ability of such species. Therefore, it is necessary to integrate the various methods available to the weed interference not impede the tomato production.

  2. Synergistic Effects of Agronet Covers and Companion Cropping on Reducing Whitefly Infestation and Improving Yield of Open Field-Grown Tomatoes

    Directory of Open Access Journals (Sweden)

    Stella Mutisya

    2016-09-01

    Full Text Available Tomatoes (Lycopersicon esculentum Mill are one of the biggest vegetable crops in the world, supplying a wide range of vitamins, minerals and fibre in human diets. In the tropics, tomatoes are predominantly grown under sub-optimal conditions by subsistence farmers, with exposure to biotic and abiotic stresses in the open field. Whitefly (Bemisia tabaci Gennadius is one of the major pests of the tomato, potentially causing up to 100% yield loss. To control whitefly, most growers indiscriminately use synthetic insecticides which negatively impact the environment, humans, and other natural pest management systems, while also increasing cost of production. This study sought to investigate the effectiveness of agronet covers and companion planting with aromatic basil (Ocimum basilicum L. as an alternative management strategy for whitefly in tomatoes and to evaluate the use of these treatments ontomato growth and yield. Two trials were conducted at the Horticulture Research and Training Field, Egerton University, Njoro, Kenya. Treatments comprised a combination of two factors, (1 growing environment (agronet and no agronet and (2 companion planting with a row of basil surrounding tomato plants, a row of basil in between adjacent rows of tomato, no companion planting. Agronet covers and companion cropping with a row of basil planted between adjacent tomato rows significantly lowered B. tabaci infestation in tomatoes by 68.7%. Better tomato yields were also recorded in treatments where the two treatments were used in combination. Higher yield (13.75 t/ha was obtained from tomatoes grown under agronet cover with a basil row planted in between adjacent rows of the tomato crop compared to 5.9 t/ha in the control. Non-marketable yield was also lowered to5.9 t/ha compared to 9.8 t/ha in the control following the use of the two treatments in combination. The results of this study demonstrate the potential viability of using companion cropping and agronet

  3. Economics Of Wholesale Marketing Of Tomato Fruits In Ibadan ...

    African Journals Online (AJOL)

    Economics Of Wholesale Marketing Of Tomato Fruits In Ibadan Metropolis Of Oyo State, Nigeria. ... fruits, determining marketing efficiency, margin and marketing costs associated with tomato marketing. ... EMAIL FULL TEXT EMAIL FULL TEXT

  4. TARGET MICROFLORA OF A TOMATO C ROPPED SOIL.

    African Journals Online (AJOL)

    The effect of benomyl on the microflora of a tomato cropped soil was investigated. ... both in culture and soil treatments. ... pseudomonads to benomyl in culture .... bacterial pathogens of tomato solanucearum. Indian Pin to 11:01. in vitro.

  5. Yield and Adaptability Evaluation of Newly Introduced Tomato ...

    African Journals Online (AJOL)

    High yield is a major ambition to tomato plant breeders and farmers. The purpose of the ... Tabora Region on the growth and yield of newly introduced tomato varieties. The tested ..... (1985). Evaluation of some American tomatocultivars grown.

  6. Effect of tomato cultivars, honey finisher and processing methods on ...

    African Journals Online (AJOL)

    use

    2011-12-14

    Dec 14, 2011 ... microbiological and sensory quality of tomato ketchup that was prepared using low-cost ... The color of tomato ketchup samples were measured by comparing it with standard color chart .... multiple rage tests. RESULTS AND ...

  7. Vegetative regeneration

    Science.gov (United States)

    George A. Schier; John R. Jones; Robert P. Winokur

    1985-01-01

    Aspen is noted for its ability to regenerate vegetatively by adventitious shoots or suckers that arise on its long lateral roots. It also produces sprouts from stumps and root collars; but they are not common. In a survey of regeneration after clearcutting mature aspen in Utah. Baker (1918b) found that 92% of the shoots originated from roots, 7% from root collars, and...

  8. Understory vegetation

    Science.gov (United States)

    Steve Sutherland; Todd F. Hutchinson; Jennifer L. Windus

    2003-01-01

    This chapter documents patterns of species composition and diversity within the understory vegetation layer and provides a species list for the four study areas in southern Ohio. Within each of 108 plots, we recorded the frequency of all vascular plant species in sixteen 2-m² quadrats. We recorded 297 species, including 187 forbs (176 perennials, 9 annuals, 2...

  9. Eco-Friendly Nets and Floating Row Covers Reduce Pest Infestation and Improve Tomato (Solanum lycopersicum L. Yields for Smallholder Farmers in Kenya

    Directory of Open Access Journals (Sweden)

    Elisha O. Gogo

    2014-01-01

    Full Text Available Tomato (Solanum lycopersicum L. is an important vegetable for supplying vitamins, minerals and fiber in human diets worldwide. Successful open field production of tomato in the tropics is limited by insect pests among other constraints. Two trials were conducted at the Horticulture Research and Teaching Field, Egerton University, Kenya with the objective of evaluating the effects of agricultural nets (agronets herein called eco-friendly nets (EFNs and floating row covers (FRCs on pest population and yield of tomatoes. A randomized complete block design with five replications was used. Tomato plants were protected with either fine mesh EFN (0.4-mm pore diameter, large mesh EFN (0.9-mm pore diameter or FRC. The EFN and FRC were maintained permanently closed or opened thrice a week from 9 am to 3 pm. Two control treatments were used: open unsprayed (untreated control or open and sprayed with alpha-cypermethrin based insecticide (treated control. The use of EFN and FRC helped to manage pests with the lowest pest population obtained under FRC maintained permanently covered and the highest population recorded in the untreated control. Covering tomato plants with EFN or FRC also resulted in more marketable fruit and lower yield losses compared with the unprotected systems. The EFN and FRC offer great potential as part of integrated systems for pest management and yield improvement in tomato production in regions with a tropical climate.

  10. Treating metadata as annotations: separating the content markup from the content

    Directory of Open Access Journals (Sweden)

    Fredrik Paulsson

    2007-11-01

    Full Text Available The use of digital learning resources creates an increasing need for semantic metadata, describing the whole resource, as well as parts of resources. Traditionally, schemas such as Text Encoding Initiative (TEI have been used to add semantic markup for parts of resources. This is not sufficient for use in a ”metadata ecology”, where metadata is distributed, coherent to different Application Profiles, and added by different actors. A new methodology, where metadata is “pointed in” as annotations, using XPointers, and RDF is proposed. A suggestion for how such infrastructure can be implemented, using existing open standards for metadata, and for the web is presented. We argue that such methodology and infrastructure is necessary to realize the decentralized metadata infrastructure needed for a “metadata ecology".

  11. Comparative study of oxidation in canned foods with a combination of vegetables and covering oils

    Directory of Open Access Journals (Sweden)

    E. Bravi

    2015-06-01

    Full Text Available The effects of sunflower (SFO, extra-virgin olive (EVO, and soybean oils (SBO, in combination with canned aubergins and dried tomatoes were studied during an accelerated shelf-life trial. Hydrolytic and oxidative quality parameters was determined and a sensorial test was run. For both canned vegetables, the SBO showed greater resistance to the oxidation at the end of the shelflife trial. The SBO in both vegetables yielded similar results for peroxide formation, whereas a reduced formation of secondary oxidation products was observed in aubergins. The results highlighted a higher oxidation stability of canned vegetables in SBO and EVO than those in SFO. The sensorial test underlined differences between the oils, in aubergins and dried tomatoes, after 30 days of accelerated storage (corresponding to the sell-by date. Flavour and texture were judged better for vegetables in SBO.

  12. Industrial processing versus home processing of tomato sauce

    NARCIS (Netherlands)

    Tomas, Merve; Beekwilder, Jules; Hall, Robert D.; Sagdic, Osman; Boyacioglu, Dilek; Capanoglu, Esra

    2017-01-01

    The effect of industrial and home processing, in vitro gastrointestinal digestion, individual phenolic content, and antioxidant capacity of tomato into tomato sauce were investigated. Industrial processing of tomato fruit into sauce had an overall positive effect on the total antioxidant capacity

  13. Economics Of Tomato Production In Yewa North Local Government ...

    African Journals Online (AJOL)

    Questions relating to the socio-economic characteristics of the tomato farmers, tomato outputs, output prices and cost of resources viz. labour, seed, fertilizer and land used in production, as well as constraints to tomato production were asked in the questionnaire. Production function analysis was used to show the ...

  14. Morphological and Molecular Identification of Colletotrichum acutatum from Tomato Fruit

    OpenAIRE

    Svetlana Živković; Saša Stojanović; Žarko IVanović; Nenad Trkulja; Nenad Dolovac; Goran Aleksić; Jelica Balaž

    2010-01-01

    Colletotrichum gloeosporioides, Colletotrichum acutatum, Colletotrichum coccodes, and Colletotrichum dematium are the four main species of Colletotrichum that cause tomato anthracnose. In Serbia, the occurrence of anthracnose on tomato fruit has been recorded during the last several years. Typical fruit symptoms include dark, sunken, and circular lesion with orange conidial masses. Pathogen isolates were obtained from a diseased tomato fruits, on PDA medium...

  15. Vision-based judgment of tomato maturity under growth conditions ...

    African Journals Online (AJOL)

    To determine the picking time of tomato and design the control strategy for the harvesting robot, the judgment of tomato maturity under natural conditions is ... Hue-mean and red-green color-difference image mean can be used as a criterion for the judgment of tomato maturity, and the tests indicated that the redgreen mean ...

  16. RESEARCH ON THE DEVELOPMENT OF ALTERNATIVE TECHNOLOGIES FOR THE PRODUCTION OF TOMATO SEEDLINGS IN DRĂGANU ARGEŞ

    OpenAIRE

    Florina Uleanu; Adriana Bădulescu

    2017-01-01

    This paper aims to find the most efficient techniques for the production of seedlings because it represents one of the greatest concerns of the vegetable growers, being a subject of great interest. A special attention shows determining influence of different pots, plastic or biodegradable, on the growth and development of tomato seedlings. The replanting of the seedlings was carried out in various pots (of polyethylene film, from peat, Jiffy pots, small and big alveolar pallets ) filled wi...

  17. Microbial safety of raw mixed-vegetable salad sold as an ...

    African Journals Online (AJOL)

    Alex

    2012-06-21

    Jun 21, 2012 ... A recent popular street vended food is fried rice, which is a good imitation of that sold in Chinese restaurants, especially in the cities. Semi boiled rice is fried in oil with chopped vegetables, soy sauce and egg, and served with tomato ketchup and fried chicken. Kose is fried fritters of dehulled cowpea paste ...

  18. Fungi of genus Alternaria occurring on tomato

    Directory of Open Access Journals (Sweden)

    Joanna Marcinkowska

    2013-12-01

    Full Text Available Tomato early blight in central Poland was caused by Alternaria solani (A. porri f. sp., solani and A. alernata (A. tenuis. A. alternata was isolated more often than A. solani. All isolates of A. solani in controlled conditions killed tomato seedlings, while pathogenic isolates of A. alternata caused only slight seedling blight. In greenhouse tests A. solani proved to be strongly pathogenic for leaves and stems of tomato but A. alternata was weakly pathogenic. The latter species attacked only injured fruits while, A. solanicould penetrate through undamaged peel of fruits. Both of these species caused the same type of symptoms; the differences consisted only in intensification of disease symptoms. During 1974 and 1975 field tomatoes were moderately attacked by early blight. Thebest development of this disease occurred by the turn of August and September. Determinate variety 'New Yorker' was distinguished by more severe infection of stem parts of tomato whereas the fruits of a stock variety 'Apollo' were more strongly attacked.

  19. Superfamily of ankyrin repeat proteins in tomato.

    Science.gov (United States)

    Yuan, Xiaowei; Zhang, Shizhong; Qing, Xiaohe; Sun, Meihong; Liu, Shiyang; Su, Hongyan; Shu, Huairui; Li, Xinzheng

    2013-07-10

    The ankyrin repeat (ANK) protein family plays a crucial role in plant growth and development and in response to biotic and abiotic stresses. However, no detailed information concerning this family is available for tomato (Solanum lycopersicum) due to the limited information on whole genome sequences. In this study, we identified a total of 130 ANK genes in tomato genome (SlANK), and these genes were distributed across all 12 chromosomes at various densities. And chromosomal localizations of SlANK genes indicated 25 SlANK genes were involved in tandem duplications. Based on their domain composition, all of the SlANK proteins were grouped into 13 subgroups. A combined phylogenetic tree was constructed with the aligned SlANK protein sequences. This tree revealed that the SlANK proteins comprise five major groups. An analysis of the expression profiles of SlANK genes in tomato in different tissues and in response to stresses showed that the SlANK proteins play roles in plant growth, development and stress responses. To our knowledge, this is the first report of a genome-wide analysis of the tomato ANK gene family. This study provides valuable information regarding the classification and putative functions of SlANK genes in tomato. Crown Copyright © 2013. Published by Elsevier B.V. All rights reserved.

  20. Comparative study of oxidation in canned foods with a combination of vegetables and covering oils

    OpenAIRE

    E. Bravi; A. Mangione; O. Marconi; G. Perretti

    2015-01-01

    The effects of sunflower (SFO), extra-virgin olive (EVO), and soybean oils (SBO), in combination with canned aubergins and dried tomatoes were studied during an accelerated shelf-life trial. Hydrolytic and oxidative quality parameters was determined and a sensorial test was run. For both canned vegetables, the SBO showed greater resistance to the oxidation at the end of the shelflife trial. The SBO in both vegetables yielded similar results for peroxide formation, whereas a reduced formation ...

  1. componente vegetal

    Directory of Open Access Journals (Sweden)

    Fabio Moscovich

    2005-01-01

    Full Text Available In order to determine environmental impact, indicators based on vegetation characteristics that would generate the forestry monoculture with the adjacent native forest, 32 sample unit were installed in an area of LIPSIA private enterprise, Esperanza Department, Misiones with those characteristics. The plots of 100 m2 were distributed systematically every 25 meters. The vegetation was divided in stratum: superior (DBH ≥ 10 cm, middle (1,6 cm ≤ DBH > 10 cm and inferior (DBH< cm. There were installed 10 plots in a logged native forest, 10 plots in a 18 years old Pinus elliottii Engelm. with approximately 400 trees/ha., 6 plots in a 10 – 25 years old Araucaria angustifolia (Bertd. Kuntze limiting area with approximately 900 trees/ha., and 6 plots located in this plantation. In the studied area were identified 150 vegetation species. In the inferior stratum there were found differences as function of various floristic diversity indexes. In all the cases the native forest showed larger diversity than plantations, followed by Pinus elliottii, Araucaria plantation and Araucaria limiting area. All the studied forest fitted to a logarithmical series of species distributions, that would indicate the incidence of a environmental factor in this distribution.

  2. Content-aware network storage system supporting metadata retrieval

    Science.gov (United States)

    Liu, Ke; Qin, Leihua; Zhou, Jingli; Nie, Xuejun

    2008-12-01

    Nowadays, content-based network storage has become the hot research spot of academy and corporation[1]. In order to solve the problem of hit rate decline causing by migration and achieve the content-based query, we exploit a new content-aware storage system which supports metadata retrieval to improve the query performance. Firstly, we extend the SCSI command descriptor block to enable system understand those self-defined query requests. Secondly, the extracted metadata is encoded by extensible markup language to improve the universality. Thirdly, according to the demand of information lifecycle management (ILM), we store those data in different storage level and use corresponding query strategy to retrieval them. Fourthly, as the file content identifier plays an important role in locating data and calculating block correlation, we use it to fetch files and sort query results through friendly user interface. Finally, the experiments indicate that the retrieval strategy and sort algorithm have enhanced the retrieval efficiency and precision.

  3. Leveraging Python to improve ebook metadata selection, ingest, and management

    Directory of Open Access Journals (Sweden)

    Kelly Thompson

    2017-10-01

    Full Text Available Libraries face many challenges in managing descriptive metadata for ebooks, including quality control, completeness of coverage, and ongoing management. The recent emergence of library management systems that automatically provide descriptive metadata for e-resources activated in system knowledge bases means that ebook management models are moving toward both greater efficiency and more complex implementation and maintenance choices. Automated and data-driven processes for ebook management have always been desirable, but in the current environment, they become necessary. In addition to initial selection of a record source, automation can be applied to quality control processes and ongoing maintenance in order to keep manual, eyes-on work to a minimum while providing the best possible discovery and access. In this article, we describe how we are using Python scripts to address these challenges.

  4. Data Bookkeeping Service 3 - Providing event metadata in CMS

    CERN Document Server

    Giffels, Manuel; Riley, Daniel

    2014-01-01

    The Data Bookkeeping Service 3 provides a catalog of event metadata for Monte Carlo and recorded data of the Compact Muon Solenoid (CMS) experiment at the Large Hadron Collider (LHC) at CERN, Geneva. It comprises all necessary information for tracking datasets, their processing history and associations between runs, files and datasets, on a large scale of about $200,000$ datasets and more than $40$ million files, which adds up in around $700$ GB of metadata. The DBS is an essential part of the CMS Data Management and Workload Management (DMWM) systems, all kind of data-processing like Monte Carlo production, processing of recorded event data as well as physics analysis done by the users are heavily relying on the information stored in DBS.

  5. ATLAS Metadata Infrastructure Evolution for Run 2 and Beyond

    CERN Document Server

    van Gemmeren, Peter; The ATLAS collaboration; Malon, David; Vaniachine, Alexandre

    2015-01-01

    ATLAS developed and employed for Run 1 of the Large Hadron Collider a sophisticated infrastructure for metadata handling in event processing jobs. This infrastructure profits from a rich feature set provided by the ATLAS execution control framework, including standardized interfaces and invocation mechanisms for tools and services, segregation of transient data stores with concomitant object lifetime management, and mechanisms for handling occurrences asynchronous to the control framework’s state machine transitions. This metadata infrastructure is evolving and being extended for Run 2 to allow its use and reuse in downstream physics analyses, analyses that may or may not utilize the ATLAS control framework. At the same time, multiprocessing versions of the control framework and the requirements of future multithreaded frameworks are leading to redesign of components that use an incident-handling approach to asynchrony. The increased use of scatter-gather architectures, both local and distributed, requires ...

  6. Indexing of ATLAS data management and analysis system metadata

    CERN Document Server

    Grigoryeva, Maria; The ATLAS collaboration

    2017-01-01

    This manuscript is devoted to the development of the system to manage metainformation of modern HENP experiments. The main purpose of the system is to provide scientists with transparent access to the actual and historical metadata related to data analysis, processing and modeling. The system design addresses the following goals : providing a flexible and fast search for metadata on various combinations of keywords, generating aggregated reports, categorized according to selected parameters, such as the studied physical process, scientific topic, physical group, etc. The article presents the architecture of the developed indexing and search system, as well as the results of performance tests. The comparison of the query execution speed within the developed system and in case of querying the original relational databases showed that the developed system provides results faster. Also the new system allows much more complex search requests, than the original storages.

  7. Conditions and configuration metadata for the ATLAS experiment

    International Nuclear Information System (INIS)

    Gallas, E J; Pachal, K E; Tseng, J C L; Albrand, S; Fulachier, J; Lambert, F; Zhang, Q

    2012-01-01

    In the ATLAS experiment, a system called COMA (Conditions/Configuration Metadata for ATLAS), has been developed to make globally important run-level metadata more readily accessible. It is based on a relational database storing directly extracted, refined, reduced, and derived information from system-specific database sources as well as information from non-database sources. This information facilitates a variety of unique dynamic interfaces and provides information to enhance the functionality of other systems. This presentation will give an overview of the components of the COMA system, enumerate its diverse data sources, and give examples of some of the interfaces it facilitates. We list important principles behind COMA schema and interface design, and how features of these principles create coherence and eliminate redundancy among the components of the overall system. In addition, we elucidate how interface logging data has been used to refine COMA content and improve the value and performance of end-user reports and browsers.

  8. Conditions and configuration metadata for the ATLAS experiment

    CERN Document Server

    Gallas, E J; Albrand, S; Fulachier, J; Lambert, F; Pachal, K E; Tseng, J C L; Zhang, Q

    2012-01-01

    In the ATLAS experiment, a system called COMA (Conditions/Configuration Metadata for ATLAS), has been developed to make globally important run-level metadata more readily accessible. It is based on a relational database storing directly extracted, refined, reduced, and derived information from system-specific database sources as well as information from non-database sources. This information facilitates a variety of unique dynamic interfaces and provides information to enhance the functionality of other systems. This presentation will give an overview of the components of the COMA system, enumerate its diverse data sources, and give examples of some of the interfaces it facilitates. We list important principles behind COMA schema and interface design, and how features of these principles create coherence and eliminate redundancy among the components of the overall system. In addition, we elucidate how interface logging data has been used to refine COMA content and improve the value and performance of end-user...

  9. A case for user-generated sensor metadata

    Science.gov (United States)

    Nüst, Daniel

    2015-04-01

    Cheap and easy to use sensing technology and new developments in ICT towards a global network of sensors and actuators promise previously unthought of changes for our understanding of the environment. Large professional as well as amateur sensor networks exist, and they are used for specific yet diverse applications across domains such as hydrology, meteorology or early warning systems. However the impact this "abundance of sensors" had so far is somewhat disappointing. There is a gap between (community-driven) sensor networks that could provide very useful data and the users of the data. In our presentation, we argue this is due to a lack of metadata which allows determining the fitness of use of a dataset. Syntactic or semantic interoperability for sensor webs have made great progress and continue to be an active field of research, yet they often are quite complex, which is of course due to the complexity of the problem at hand. But still, we see the most generic information to determine fitness for use is a dataset's provenance, because it allows users to make up their own minds independently from existing classification schemes for data quality. In this work we will make the case how curated user-contributed metadata has the potential to improve this situation. This especially applies for scenarios in which an observed property is applicable in different domains, and for set-ups where the understanding about metadata concepts and (meta-)data quality differs between data provider and user. On the one hand a citizen does not understand the ISO provenance metadata. On the other hand a researcher might find issues in publicly accessible time series published by citizens, which the latter might not be aware of or care about. Because users will have to determine fitness for use for each application on their own anyway, we suggest an online collaboration platform for user-generated metadata based on an extremely simplified data model. In the most basic fashion

  10. Data Bookkeeping Service 3 - Providing Event Metadata in CMS

    Energy Technology Data Exchange (ETDEWEB)

    Giffels, Manuel [CERN; Guo, Y. [Fermilab; Riley, Daniel [Cornell U.

    2014-01-01

    The Data Bookkeeping Service 3 provides a catalog of event metadata for Monte Carlo and recorded data of the Compact Muon Solenoid (CMS) experiment at the Large Hadron Collider (LHC) at CERN, Geneva. It comprises all necessary information for tracking datasets, their processing history and associations between runs, files and datasets, on a large scale of about 200, 000 datasets and more than 40 million files, which adds up in around 700 GB of metadata. The DBS is an essential part of the CMS Data Management and Workload Management (DMWM) systems [1], all kind of data-processing like Monte Carlo production, processing of recorded event data as well as physics analysis done by the users are heavily relying on the information stored in DBS.

  11. Genetic divergence of tomato subsamples

    Directory of Open Access Journals (Sweden)

    André Pugnal Mattedi

    2014-02-01

    Full Text Available Understanding the genetic variability of a species is crucial for the progress of a genetic breeding program and requires characterization and evaluation of germplasm. This study aimed to characterize and evaluate 101 tomato subsamples of the Salad group (fresh market and two commercial controls, one of the Salad group (cv. Fanny and another of the Santa Cruz group (cv. Santa Clara. Four experiments were conducted in a randomized block design with three replications and five plants per plot. The joint analysis of variance was performed and characteristics with significant complex interaction between control and experiment were excluded. Subsequently, the multicollinearity diagnostic test was carried out and characteristics that contributed to severe multicollinearity were excluded. The relative importance of each characteristics for genetic divergence was calculated by the Singh's method (Singh, 1981, and the less important ones were excluded according to Garcia (1998. Results showed large genetic divergence among the subsamples for morphological, agronomic and organoleptic characteristics, indicating potential for genetic improvement. The characteristics total soluble solids, mean number of good fruits per plant, endocarp thickness, mean mass of marketable fruit per plant, total acidity, mean number of unmarketable fruit per plant, internode diameter, internode length, main stem thickness and leaf width contributed little to the genetic divergence between the subsamples and may be excluded in future studies.

  12. An institutional repository initiative and issues concerning metadata

    OpenAIRE

    BAYRAM, Özlem; ATILGAN, Doğan; ARSLANTEKİN, Sacit

    2006-01-01

    Ankara University has become one of the fist open access initiatives in Turkey. Ankara University Open Access Program (AUO) was formed as part of the Open Access project (http://acikarsiv.ankara.edu.tr ) and supported by the University with an example of an open access institutional repository. As for the further step, the system will require the metadata tools to enable international recognization. According to Budapest Open Access Initiative, as suggested two strategies for open access t...

  13. Standardizing metadata and taxonomic identification in metabarcoding studies.

    Science.gov (United States)

    Tedersoo, Leho; Ramirez, Kelly S; Nilsson, R Henrik; Kaljuvee, Aivi; Kõljalg, Urmas; Abarenkov, Kessy

    2015-01-01

    High-throughput sequencing-based metabarcoding studies produce vast amounts of ecological data, but a lack of consensus on standardization of metadata and how to refer to the species recovered severely hampers reanalysis and comparisons among studies. Here we propose an automated workflow covering data submission, compression, storage and public access to allow easy data retrieval and inter-study communication. Such standardized and readily accessible datasets facilitate data management, taxonomic comparisons and compilation of global metastudies.

  14. Automated Atmospheric Composition Dataset Level Metadata Discovery. Difficulties and Surprises

    Science.gov (United States)

    Strub, R. F.; Falke, S. R.; Kempler, S.; Fialkowski, E.; Goussev, O.; Lynnes, C.

    2015-12-01

    The Atmospheric Composition Portal (ACP) is an aggregator and curator of information related to remotely sensed atmospheric composition data and analysis. It uses existing tools and technologies and, where needed, enhances those capabilities to provide interoperable access, tools, and contextual guidance for scientists and value-adding organizations using remotely sensed atmospheric composition data. The initial focus is on Essential Climate Variables identified by the Global Climate Observing System - CH4, CO, CO2, NO2, O3, SO2 and aerosols. This poster addresses our efforts in building the ACP Data Table, an interface to help discover and understand remotely sensed data that are related to atmospheric composition science and applications. We harvested GCMD, CWIC, GEOSS metadata catalogs using machine to machine technologies - OpenSearch, Web Services. We also manually investigated the plethora of CEOS data providers portals and other catalogs where that data might be aggregated. This poster is our experience of the excellence, variety, and challenges we encountered.Conclusions:1.The significant benefits that the major catalogs provide are their machine to machine tools like OpenSearch and Web Services rather than any GUI usability improvements due to the large amount of data in their catalog.2.There is a trend at the large catalogs towards simulating small data provider portals through advanced services. 3.Populating metadata catalogs using ISO19115 is too complex for users to do in a consistent way, difficult to parse visually or with XML libraries, and too complex for Java XML binders like CASTOR.4.The ability to search for Ids first and then for data (GCMD and ECHO) is better for machine to machine operations rather than the timeouts experienced when returning the entire metadata entry at once. 5.Metadata harvest and export activities between the major catalogs has led to a significant amount of duplication. (This is currently being addressed) 6.Most (if not

  15. Improving Earth Science Metadata: Modernizing ncISO

    Science.gov (United States)

    O'Brien, K.; Schweitzer, R.; Neufeld, D.; Burger, E. F.; Signell, R. P.; Arms, S. C.; Wilcox, K.

    2016-12-01

    ncISO is a package of tools developed at NOAA's National Center for Environmental Information (NCEI) that facilitates the generation of ISO 19115-2 metadata from NetCDF data sources. The tool currently exists in two iterations: a command line utility and a web-accessible service within the THREDDS Data Server (TDS). Several projects, including NOAA's Unified Access Framework (UAF), depend upon ncISO to generate the ISO-compliant metadata from their data holdings and use the resulting information to populate discovery tools such as NCEI's ESRI Geoportal and NOAA's data.noaa.gov CKAN system. In addition to generating ISO 19115-2 metadata, the tool calculates a rubric score based on how well the dataset follows the Attribute Conventions for Dataset Discovery (ACDD). The result of this rubric calculation, along with information about what has been included and what is missing is displayed in an HTML document generated by the ncISO software package. Recently ncISO has fallen behind in terms of supporting updates to conventions such updates to the ACDD. With the blessing of the original programmer, NOAA's UAF has been working to modernize the ncISO software base. In addition to upgrading ncISO to utilize version1.3 of the ACDD, we have been working with partners at Unidata and IOOS to unify the tool's code base. In essence, we are merging the command line capabilities into the same software that will now be used by the TDS service, allowing easier updates when conventions such as ACDD are updated in the future. In this presentation, we will discuss the work the UAF project has done to support updated conventions within ncISO, as well as describe how the updated tool is helping to improve metadata throughout the earth and ocean sciences.

  16. Effects of gamma radiation in tomato seeds

    Energy Technology Data Exchange (ETDEWEB)

    Wiendl, Toni A.; Wiendl, Fritz W.; Franco, Suely S.H.; Franco, Jose G.; Althur, Valter, E-mail: tawiendl@hotmail.com, E-mail: gilmita@uol.com.br [Instituto de Pesquisas Energeticas e Nucleares (IPEN/CNEN-SP), Sao Paulo, SP (Brazil); Arthur, Paula B., E-mail: arthur@cena.usp.br [Centro de Energia Nuclear na Agricultura (CENA/USP), Piracicaba, SP (Brazil)

    2013-07-01

    Tomato dry seeds of the hybrid 'Gladiador' F1 were exposed to low doses of gamma radiation from Co-60 source at 0,509 kGy tax rate in order to study stimulation effects of radiation on germination and plant growth. Eight treatments radiation doses were applied as follows: 0 (control); 2,5; 5,0; 7,5; 10,0; 12,5; 15,0; 20,0 Gy. Seed germination as well as green fruits number, harvested fruit number, fruit weight and total production were assessed to identify occurrence of stimulation. Tomato seeds and plants were handled as for usual tomato production in Brazil. Low doses of gamma radiation treatment in the seeds stimulate germination and substantially increase fruit number and total production up to 86% at 10 Gy dose. There are evidences that the use of low doses of gamma radiation can stimulate germination and plant production thus, showing hormetic effects. (author)

  17. Improving tomato seed quality- challenges and possibilities

    DEFF Research Database (Denmark)

    Shrestha, Santosh

    The thesis investigates the possibility of using single seed near-infrared (NIR) spectroscopy, multispectral imaging (MSI) and NIR hyperspectral imaging (NIR-HSI) in combination with chemometrics for rapid determination of the tomato seed quality. The results of the PhD study are compiled in four...... manuscripts (MS). These non-destructive methods show the potential of sorting tomato seeds as per their viability and varietal identity. The results are discussed in the context of possible contribution from these methods in the improvement of the seed quality in Nepal. In MS I, potential application of NIR...... spectroscopy in combination with chemometrics for prediction of tomato seed viability is demonstrated. The work in MS I also emphasises on identifying the important NIR spectral regions for the chemometric model that are relevant to the separation of viable and non-viable seeds. The NIR-HIS method was also...

  18. Effects of gamma radiation in tomato seeds

    International Nuclear Information System (INIS)

    Wiendl, Toni A.; Wiendl, Fritz W.; Franco, Suely S.H.; Franco, Jose G.; Althur, Valter; Arthur, Paula B.

    2013-01-01

    Tomato dry seeds of the hybrid 'Gladiador' F1 were exposed to low doses of gamma radiation from Co-60 source at 0,509 kGy tax rate in order to study stimulation effects of radiation on germination and plant growth. Eight treatments radiation doses were applied as follows: 0 (control); 2,5; 5,0; 7,5; 10,0; 12,5; 15,0; 20,0 Gy. Seed germination as well as green fruits number, harvested fruit number, fruit weight and total production were assessed to identify occurrence of stimulation. Tomato seeds and plants were handled as for usual tomato production in Brazil. Low doses of gamma radiation treatment in the seeds stimulate germination and substantially increase fruit number and total production up to 86% at 10 Gy dose. There are evidences that the use of low doses of gamma radiation can stimulate germination and plant production thus, showing hormetic effects. (author)

  19. Distribution of Tomato spotted wilt virus in dahlia plants.

    Science.gov (United States)

    Asano, S; Hirayama, Y; Matsushita, Y

    2017-04-01

    Tomato spotted wilt virus (TSWV) causes significant losses in the production of the ornamental plant Dahlia variabilis in Japan. The purpose of this study was to examine the distribution of TSWV in dahlia plants and identify plant parts that can be used in the selection of TSWV-free plants. The distribution of TSWV was investigated using reverse transcriptional polymerase chain reaction (RT-PCR) and tissue blot immunoassay. The detection rate of TSWV in latent infected compound leaves was the highest in the petiole, and it decreased from the veins and rachis to the lamina. The tissue blot immunoassays of the leaflets showed an uneven distribution of TSWV, especially along the edge of the leaf blade. In stems, the detection rate of TSWV was high partway up the stem compared to that in the upper and the lower parts of the stem during the vegetative growth stage. A highly uneven distribution was observed in the bulb. Our results indicated that middle parts of the stem as well as the petioles, rachis, and veins of compound leaves are suitable for detection of TSWV in dahlias. This study is the first to report uneven distribution of TSWV in dahlia plants. In this study, the distribution of Tomato spotted wilt virus (TSWV) in various parts of dahlia plants was investigated for the first time. The distribution of TSWV was uneven in compound leaves, leaflets, stems, and bulbs. The middle parts of the stem or the petiole and leaf veins should be sampled to detect TSWV when selecting healthy plants. © 2017 The Society for Applied Microbiology.

  20. STUDY OF THE USE OF EDIBLE POWDERS TOMATO SAUCE TECHNOLOGIES

    Directory of Open Access Journals (Sweden)

    O. Benderska

    2018-04-01

    Full Text Available Considered the technology for the production of edible powders from vegetable raw materials. The technology for producing powders from berries is developed to produce a high-quality product in which all ingredients of raw materials are stored in a concentrated form.The current trend in nutrition is related to the expansion of the range of functional products whose daily use contributes to the prevention of hypovitaminoses and metabolic disorders, and ultimately to the rehabilitation of the population. New, non-traditional sources of local raw materials, including plant based products, need to be explored and exploited in order to address the issue of instantiate new generation of healthy foods, and the development of technologies for obtaining functionalities. The use of fruit crops, the most source of biologically active substances, is very promising in this direction.The Department of Preservation Technology of the National University Food Technology has conducted a study to enable the use of fruit and berries for food powders. To this end, powder has been obtained from the blueberry berries of ordinary, with the establishment of its physico-chemical properties.The patterns of the influence of the blueberry powder on the functional properties of the foodstuffs were investigated in the example of tomato sauces.Analysis of the results of the studies has shown that a blueberry berry powder can be used in the production of canned and other products not only to enrich their functional ingredients but also to provide them with new technological properties. The food powders received do not contain harmful impurities, have high food value, are easily absorbed by the body, compact and long periods of time. Studies have shown that the blueberry powder is a rich source of vitamins (c acid, β-carotene, tocopherol and can be used successfully in the manufacture of tomato sauces with functional properties.

  1. Fast processing of digital imaging and communications in medicine (DICOM) metadata using multiseries DICOM format.

    Science.gov (United States)

    Ismail, Mahmoud; Philbin, James

    2015-04-01

    The digital imaging and communications in medicine (DICOM) information model combines pixel data and its metadata in a single object. There are user scenarios that only need metadata manipulation, such as deidentification and study migration. Most picture archiving and communication system use a database to store and update the metadata rather than updating the raw DICOM files themselves. The multiseries DICOM (MSD) format separates metadata from pixel data and eliminates duplicate attributes. This work promotes storing DICOM studies in MSD format to reduce the metadata processing time. A set of experiments are performed that update the metadata of a set of DICOM studies for deidentification and migration. The studies are stored in both the traditional single frame DICOM (SFD) format and the MSD format. The results show that it is faster to update studies' metadata in MSD format than in SFD format because the bulk data is separated in MSD and is not retrieved from the storage system. In addition, it is space efficient to store the deidentified studies in MSD format as it shares the same bulk data object with the original study. In summary, separation of metadata from pixel data using the MSD format provides fast metadata access and speeds up applications that process only the metadata.

  2. ORGANIZATION OF DIGITAL RESOURCES IN REPEC THROUGH REDIF METADATA

    Directory of Open Access Journals (Sweden)

    Salvador Enrique Vazquez Moctezuma

    2018-06-01

    Full Text Available Introduction: The disciplinary repository RePEc (Research Papers in Economics provides access to a wide range of preprints, journal articles, books, book chapters and software about economic and administrative sciences. This repository adds bibliographic records produced by different universities, institutes, editors and authors that work collaboratively following the norms of the documentary organization. Objective: In this paper, mainly, we identify and analyze the functioning of RePEc, which includes the organization of the files, which is characterized using the protocol Guildford and metadata ReDIF (Research Documentation Information Format templates own for the documentary description. Methodology: Part of this research was studied theoretically in the literature; another part was carried out by observing a series of features visible on the RePEc website and in the archives of a journal that collaborates in this repository. Results: The repository is a decentralized collaborative project and it also provides several services derived from the metadata analysis. Conclusions: We conclude that the ReDIF templates and the Guildford communication protocol are key elements for organizing records in RePEc, and there is a similarity with the Dublin Core metadata

  3. Embedding Metadata and Other Semantics in Word Processing Documents

    Directory of Open Access Journals (Sweden)

    Peter Sefton

    2009-10-01

    Full Text Available This paper describes a technique for embedding document metadata, and potentially other semantic references inline in word processing documents, which the authors have implemented with the help of a software development team. Several assumptions underly the approach; It must be available across computing platforms and work with both Microsoft Word (because of its user base and OpenOffice.org (because of its free availability. Further the application needs to be acceptable to and usable by users, so the initial implementation covers only small number of features, which will only be extended after user-testing. Within these constraints the system provides a mechanism for encoding not only simple metadata, but for inferring hierarchical relationships between metadata elements from a ‘flat’ word processing file.The paper includes links to open source code implementing the techniques as part of a broader suite of tools for academic writing. This addresses tools and software, semantic web and data curation, integrating curation into research workflows and will provide a platform for integrating work on ontologies, vocabularies and folksonomies into word processing tools.

  4. The ATLAS Eventlndex: data flow and inclusion of other metadata

    Science.gov (United States)

    Barberis, D.; Cárdenas Zárate, S. E.; Favareto, A.; Fernandez Casani, A.; Gallas, E. J.; Garcia Montoro, C.; Gonzalez de la Hoz, S.; Hrivnac, J.; Malon, D.; Prokoshin, F.; Salt, J.; Sanchez, J.; Toebbicke, R.; Yuan, R.; ATLAS Collaboration

    2016-10-01

    The ATLAS EventIndex is the catalogue of the event-related metadata for the information collected from the ATLAS detector. The basic unit of this information is the event record, containing the event identification parameters, pointers to the files containing this event as well as trigger decision information. The main use case for the EventIndex is event picking, as well as data consistency checks for large production campaigns. The EventIndex employs the Hadoop platform for data storage and handling, as well as a messaging system for the collection of information. The information for the EventIndex is collected both at Tier-0, when the data are first produced, and from the Grid, when various types of derived data are produced. The EventIndex uses various types of auxiliary information from other ATLAS sources for data collection and processing: trigger tables from the condition metadata database (COMA), dataset information from the data catalogue AMI and the Rucio data management system and information on production jobs from the ATLAS production system. The ATLAS production system is also used for the collection of event information from the Grid jobs. EventIndex developments started in 2012 and in the middle of 2015 the system was commissioned and started collecting event metadata, as a part of ATLAS Distributed Computing operations.

  5. Metabolonote: A wiki-based database for managing hierarchical metadata of metabolome analyses

    Directory of Open Access Journals (Sweden)

    Takeshi eAra

    2015-04-01

    Full Text Available Metabolomics—technology for comprehensive detection of small molecules in an organism—lags behind the other omics in terms of publication and dissemination of experimental data. Among the reasons for this are difficulty precisely recording information about complicated analytical experiments (metadata, existence of various databases with their own metadata descriptions, and low reusability of the published data, resulting in submitters (the researchers who generate the data being insufficiently motivated. To tackle these issues, we developed Metabolonote, a Semantic MediaWiki-based database designed specifically for managing metabolomic metadata. We also defined a metadata and data description format, called TogoMD, with an ID system that is required for unique access to each level of the tree-structured metadata such as study purpose, sample, analytical method, and data analysis. Separation of the management of metadata from that of data and permission to attach related information to the metadata provide advantages for submitters, readers, and database developers. The metadata are enriched with information such as links to comparable data, thereby functioning as a hub of related data resources. They also enhance not only readers' understanding and use of data, but also submitters' motivation to publish the data. The metadata are computationally shared among other systems via APIs, which facilitates the construction of novel databases by database developers. A permission system that allows publication of immature metadata and feedback from readers also helps submitters to improve their metadata. Hence, this aspect of Metabolonote, as a metadata preparation tool, is complementary to high-quality and persistent data repositories such as MetaboLights. A total of 808 metadata for analyzed data obtained from 35 biological species are published currently. Metabolonote and related tools are available free of cost at http://metabolonote.kazusa.or.jp/.

  6. Design of Tomato Drying System by Utilizing Brine Geothermal

    Science.gov (United States)

    Afuar, W.; Sibarani, B.; Abdurrahman, G.; Hendrarsakti, J.

    2016-09-01

    Cultivation of tomato plants in Indonesia has been started since 1961.Tomatoes generally will rot in three days if left on storage. Moreover, low quality tomatoes have cheaper price. After harvested, tomatoes need to be treated by drying process so it can last longer. Energy for drying tomatoes can be obtained by utilizing heat from geothermal brine. Purpose of this research is to design a tomato drying system by extracting heat of geothermal brine from separator with certain flow rate to heat up water by using a heat exchanger. Furthermore, this water will be used to heat up the surrounding air which is circulated by blower system to heat up the tomatoes chamber. Tomatoes drying process needs temperature range of 50-70°C to evaporate water content from 95.7% to 26%. After that treatment, the tomatoes are expected to have better durability. The objective of this study is to determine the quantity of hot brine which is needed for drying tomatoes and to design a drying system so that tomatoes can last longer.

  7. Screening tomato genotypes for adaptation to high temperature in West Africa

    DEFF Research Database (Denmark)

    Kugblenu, Yvonne O.; Danso, Eric Oppong; Ofori, Kwadjo

    2013-01-01

    ’ with a combined average of 85.7 g. The first two principal components (PCs) accounted for 79.7% of total variation. The first PC had positive weights for number of flowers per truss, number of fruits per plant, total number of flowers, yield per plant and number of trusses. PC2 explained 11% of the total......Tomato is an important vegetable widely grown in the tropics due to its nutritional value and financial benefits for farmers. In Ghana, there is an undersupply caused by production ceasing entirely from October to May due to high temperatures. Heat stress has been reported to cause excessive flower...

  8. Metadata Wizard: an easy-to-use tool for creating FGDC-CSDGM metadata for geospatial datasets in ESRI ArcGIS Desktop

    Science.gov (United States)

    Ignizio, Drew A.; O'Donnell, Michael S.; Talbert, Colin B.

    2014-01-01

    Creating compliant metadata for scientific data products is mandated for all federal Geographic Information Systems professionals and is a best practice for members of the geospatial data community. However, the complexity of the The Federal Geographic Data Committee’s Content Standards for Digital Geospatial Metadata, the limited availability of easy-to-use tools, and recent changes in the ESRI software environment continue to make metadata creation a challenge. Staff at the U.S. Geological Survey Fort Collins Science Center have developed a Python toolbox for ESRI ArcDesktop to facilitate a semi-automated workflow to create and update metadata records in ESRI’s 10.x software. The U.S. Geological Survey Metadata Wizard tool automatically populates several metadata elements: the spatial reference, spatial extent, geospatial presentation format, vector feature count or raster column/row count, native system/processing environment, and the metadata creation date. Once the software auto-populates these elements, users can easily add attribute definitions and other relevant information in a simple Graphical User Interface. The tool, which offers a simple design free of esoteric metadata language, has the potential to save many government and non-government organizations a significant amount of time and costs by facilitating the development of The Federal Geographic Data Committee’s Content Standards for Digital Geospatial Metadata compliant metadata for ESRI software users. A working version of the tool is now available for ESRI ArcDesktop, version 10.0, 10.1, and 10.2 (downloadable at http:/www.sciencebase.gov/metadatawizard).

  9. Data catalog project—A browsable, searchable, metadata system

    International Nuclear Information System (INIS)

    Stillerman, Joshua; Fredian, Thomas; Greenwald, Martin; Manduchi, Gabriele

    2016-01-01

    Modern experiments are typically conducted by large, extended groups, where researchers rely on other team members to produce much of the data they use. The experiments record very large numbers of measurements that can be difficult for users to find, access and understand. We are developing a system for users to annotate their data products with structured metadata, providing data consumers with a discoverable, browsable data index. Machine understandable metadata captures the underlying semantics of the recorded data, which can then be consumed by both programs, and interactively by users. Collaborators can use these metadata to select and understand recorded measurements. The data catalog project is a data dictionary and index which enables users to record general descriptive metadata, use cases and rendering information as well as providing them a transparent data access mechanism (URI). Users describe their diagnostic including references, text descriptions, units, labels, example data instances, author contact information and data access URIs. The list of possible attribute labels is extensible, but limiting the vocabulary of names increases the utility of the system. The data catalog is focused on the data products and complements process-based systems like the Metadata Ontology Provenance project [Greenwald, 2012; Schissel, 2015]. This system can be coupled with MDSplus to provide a simple platform for data driven display and analysis programs. Sites which use MDSplus can describe tree branches, and if desired create ‘processed data trees’ with homogeneous node structures for measurements. Sites not currently using MDSplus can either use the database to reference local data stores, or construct an MDSplus tree whose leaves reference the local data store. A data catalog system can provide a useful roadmap of data acquired from experiments or simulations making it easier for researchers to find and access important data and understand the meaning of the

  10. Data catalog project—A browsable, searchable, metadata system

    Energy Technology Data Exchange (ETDEWEB)

    Stillerman, Joshua, E-mail: jas@psfc.mit.edu [MIT Plasma Science and Fusion Center, Cambridge, MA (United States); Fredian, Thomas; Greenwald, Martin [MIT Plasma Science and Fusion Center, Cambridge, MA (United States); Manduchi, Gabriele [Consorzio RFX, Euratom-ENEA Association, Corso Stati Uniti 4, Padova 35127 (Italy)

    2016-11-15

    Modern experiments are typically conducted by large, extended groups, where researchers rely on other team members to produce much of the data they use. The experiments record very large numbers of measurements that can be difficult for users to find, access and understand. We are developing a system for users to annotate their data products with structured metadata, providing data consumers with a discoverable, browsable data index. Machine understandable metadata captures the underlying semantics of the recorded data, which can then be consumed by both programs, and interactively by users. Collaborators can use these metadata to select and understand recorded measurements. The data catalog project is a data dictionary and index which enables users to record general descriptive metadata, use cases and rendering information as well as providing them a transparent data access mechanism (URI). Users describe their diagnostic including references, text descriptions, units, labels, example data instances, author contact information and data access URIs. The list of possible attribute labels is extensible, but limiting the vocabulary of names increases the utility of the system. The data catalog is focused on the data products and complements process-based systems like the Metadata Ontology Provenance project [Greenwald, 2012; Schissel, 2015]. This system can be coupled with MDSplus to provide a simple platform for data driven display and analysis programs. Sites which use MDSplus can describe tree branches, and if desired create ‘processed data trees’ with homogeneous node structures for measurements. Sites not currently using MDSplus can either use the database to reference local data stores, or construct an MDSplus tree whose leaves reference the local data store. A data catalog system can provide a useful roadmap of data acquired from experiments or simulations making it easier for researchers to find and access important data and understand the meaning of the

  11. ncISO Facilitating Metadata and Scientific Data Discovery

    Science.gov (United States)

    Neufeld, D.; Habermann, T.

    2011-12-01

    Increasing the usability and availability climate and oceanographic datasets for environmental research requires improved metadata and tools to rapidly locate and access relevant information for an area of interest. Because of the distributed nature of most environmental geospatial data, a common approach is to use catalog services that support queries on metadata harvested from remote map and data services. A key component to effectively using these catalog services is the availability of high quality metadata associated with the underlying data sets. In this presentation, we examine the use of ncISO, and Geoportal as open source tools that can be used to document and facilitate access to ocean and climate data available from Thematic Realtime Environmental Distributed Data Services (THREDDS) data services. Many atmospheric and oceanographic spatial data sets are stored in the Network Common Data Format (netCDF) and served through the Unidata THREDDS Data Server (TDS). NetCDF and THREDDS are becoming increasingly accepted in both the scientific and geographic research communities as demonstrated by the recent adoption of netCDF as an Open Geospatial Consortium (OGC) standard. One important source for ocean and atmospheric based data sets is NOAA's Unified Access Framework (UAF) which serves over 3000 gridded data sets from across NOAA and NOAA-affiliated partners. Due to the large number of datasets, browsing the data holdings to locate data is impractical. Working with Unidata, we have created a new service for the TDS called "ncISO", which allows automatic generation of ISO 19115-2 metadata from attributes and variables in TDS datasets. The ncISO metadata records can be harvested by catalog services such as ESSI-labs GI-Cat catalog service, and ESRI's Geoportal which supports query through a number of services, including OpenSearch and Catalog Services for the Web (CSW). ESRI's Geoportal Server provides a number of user friendly search capabilities for end users

  12. Carotenoids and lycopene content in fresh and dried tomato fruits and tomato juice

    Directory of Open Access Journals (Sweden)

    Andrea Mendelová

    2013-01-01

    Full Text Available Important component of the tomato are carotenoid dyes, especially lycopene. The importance of lycopene in the diet of people in recent years has grown mainly for its pharmacological effects due to its ability to reduce the risk of carcinoma diseases and prevention of cardiovascular diseases. The aim of this work was to analyze the content of total carotenoids and lycopene in 8 varieties of tomato and to monitor dynamic changes after their different treatments (heating, drying. The experiment included following tomato varieties: Bambino F1, Darina F1, Diana F1, Denár, Milica F1, Orange F1, Paulína F1, Šejk F1.We found that processing of tomato fruits into juices and dried slices positively affected the presence of carotenoids and lycopene. Processing leads to an increase in the content of carotenoids that can be attributed to better availability of these components in the human body.

  13. Activation tagging in tomato identifies a transcriptional regulator of anthocyanin biosynthesis, modification, and transport.

    Science.gov (United States)

    Mathews, Helena; Clendennen, Stephanie K; Caldwell, Colby G; Liu, Xing Liang; Connors, Karin; Matheis, Nikolaus; Schuster, Debra K; Menasco, D J; Wagoner, Wendy; Lightner, Jonathan; Wagner, D Ry

    2003-08-01

    We have developed a high-throughput T-DNA insertional mutagenesis program in tomato using activation tagging to identify genes that regulate metabolic pathways. One of the activation-tagged insertion lines (ant1) showed intense purple pigmentation from the very early stage of shoot formation in culture, reflecting activation of the biosynthetic pathway leading to anthocyanin accumulation. The purple coloration resulted from the overexpression of a gene that encodes a MYB transcription factor. Vegetative tissues of ant1 plants displayed intense purple color, and the fruit showed purple spotting on the epidermis and pericarp. The gene-to-trait relationship of ant1 was confirmed by the overexpression of ANT1 in transgenic tomato and in tobacco under the control of a constitutive promoter. Suppression subtractive hybridization and RNA hybridization analysis of the purple tomato plants indicated that the overexpression of ANT1 caused the upregulation of genes that encode proteins in both the early and later steps of anthocyanidin biosynthesis as well as genes involved in the glycosylation and transport of anthocyanins into the vacuole.

  14. Cultivation of Tomato Tissues Capable of Forming Flowers and Fruits in Vitro

    Science.gov (United States)

    Galston, Arthur W.

    1998-01-01

    The final phase of this research project was designed to develop a practical method for producing a steady supply of fresh cherry tomato fruits over a period of several months, for possible use as a fresh vegetable supplement to a standard diet of astronauts on extended missions. This effort was successful. We were able to excise immature flowers from Pixie tomato plants grown in a controlled condition room, implant them on artificial media under aseptic conditions, and get them to develop into edible fruits in a little over a month. The medium (Murashige-Skoog) was purchased from Sigma, supplemented with sugar plus a synthetic analog of the plant hormone cytokinin, and adjusted to pH 5.8. A temperature of at least 25 C and visible light helped to produce ripe red fruits within 7 weeks. To ensure a steady supply of such tomatoes, we found it possible to store the explanted flower buds in MS medium at 5 C for at least 6 weeks without significant loss of ability to develop into fruits. This means that many containers could be prepared before launch and put into a refrigerator; a convenient number could then be removed periodically to guarantee a succession of harvests during the life of an extended mission. Details are found in the attached reprints. Subsequent applications for funds for flight or continued research were denied, and the project was terminated.

  15. Effect of gamma radiation on the color and ph of tomatoes

    International Nuclear Information System (INIS)

    Fabbri, Adriana D.T.; Sabato, Susy F.

    2009-01-01

    Tomato (Lycopersicum esculentum Mill) is one of the most widely grown vegetables in Brazil. It has great economic importance in view of constant increases in demand, both in the forms of natural or industrialized product. However, the issue that most affects its culture is its short life in post-harvest, because of its susceptibility to various types of pests. Some pest-damaged fruits are even unable to be sold in the market. The control of chemical insecticides, a practice used by most farmers, promotes a reduction in the population of pests. However, there are many pests such as the tomato moth, that are more difficult to control due to their resistance to pesticides. Based on the fact that the energy use of ionizing radiation in food has shown positive results in various fields of application, such as in the control of insect infestation, delay of fruit's ripening and reduction of microbial load, the irradiation can be identified as a potential solution to this problem. Due to these factors, this work aims to study the physic-chemical characteristics of tomatoes, under the effect of different doses of gamma radiation (0.25 kGy, 0.5 kGy , 1.0 kGy and 2.0 kGy). (author)

  16. Fungitoxic potential of tagetes erectus for the management of alternaria alternata strains of tomato

    International Nuclear Information System (INIS)

    Mehmood, T.; Shafique, S.; Shafique, S.; Zaheer, Z.

    2014-01-01

    Tomato (Lycopersicum esculentum Mill.) is economically the most vital vegetable crops of this world but diseases reduce tomato production to a greater extent worldwide. Plants exudates contribute a lot in fight against pathogens. The current study indicates the pathogenic potential of Alternaria alternata FCBP-573 against tomato. RAPD analysis confirmed that A. alternata FCBP-573 had variability in its genetic constitution with other two isolates; this disparity in genetic constitution might be a cause to stir up more pathogenicity in this isolate. Therefore, it was selected as the most pathogenic isolate and subjected to biological control through Tagetes erectus L. In antifungal bioassays different plant parts of T. erectus with 1-4% concentrations of aqueous, and organic extracts of each part were evaluated against A. alternata FCBP- 573. Results revealed that the growth of A. alternata FCBP-573 was greatly inhibited at 4% concentration of methanol extract followed by aqueous and n-hexane extract. Among different plant parts tested, root extract exhibited more promising results by causing 81-92% reduction in biomass. The research concludes that aqueous and organic extracts of ornamentals have potential to obstruct dreadful effect of pathogenic fungi by suppressing their growth. T. erectus conferred vital and surprisingly stable compounds having inhibitory potential against A. alternata FCBP-573. (author)

  17. Tomato as a Source of Carotenoids and Polyphenols Targeted to Cancer Prevention

    Directory of Open Access Journals (Sweden)

    Raúl Martí

    2016-06-01

    Full Text Available A diet rich in vegetables has been associated with a reduced risk of many diseases related to aging and modern lifestyle. Over the past several decades, many researches have pointed out the direct relation between the intake of bioactive compounds present in tomato and a reduced risk of suffering different types of cancer. These bioactive constituents comprise phytochemicals such as carotenoids and polyphenols. The direct intake of these chemoprotective molecules seems to show higher efficiencies when they are ingested in its natural biological matrix than when they are ingested isolated or in dietary supplements. Consequently, there is a growing trend for improvement of the contents of these bioactive compounds in foods. The control of growing environment and processing conditions can ensure the maximum potential accumulation or moderate the loss of bioactive compounds, but the best results are obtained developing new varieties via plant breeding. The modification of single steps of metabolic pathways or their regulation via conventional breeding or genetic engineering has offered excellent results in crops such as tomato. In this review, we analyse the potential of tomato as source of the bioactive constituents with cancer-preventive properties and the result of modern breeding programs as a strategy to increase the levels of these compounds in the diet.

  18. Susceptibility of the tomato mutant high pigment-2dg (hp-2dg) to Orobanche spp. infection.

    Science.gov (United States)

    López-Ráez, Juan Antonio; Charnikhova, Tatsiana; Mulder, Patrick; Kohlen, Wouter; Bino, Raoul; Levin, Ilan; Bouwmeester, Harro

    2008-08-13

    The consumption of natural products with potential health benefits has been continuously growing, and enhanced pigmentation is of major economic importance in fruits and vegetables. The tomato hp-2 ( dg ) is an important mutant line that has been introgressed into commercial tomato cultivars marketed as lycopene rich tomatoes (LRT) because of their enhanced fruit pigmentation, attributed to higher levels of carotenoids, including lycopene. Strigolactones are signaling compounds that mediate host finding in root parasitic plants and are biosynthetically derived from carotenoids. Considering the high carotenoid content of the hp-2 ( dg ) mutant, we studied its susceptibility to the root parasite Orobanche. In a field experiment, the average number of Orobanche aegyptiaca plants growing on hp-2 ( dg ) was surprisingly significantly reduced compared with its isogenic wild-type counterpart. In vitro assays and LC-MS/MS analysis showed that this reduction was associated with a lower production of strigolactones, which apparently renders the high-carotenoid hp-2 ( dg ) mutant less susceptible to Orobanche.

  19. Population Modeling Approach to Optimize Crop Harvest Strategy. The Case of Field Tomato.

    Science.gov (United States)

    Tran, Dinh T; Hertog, Maarten L A T M; Tran, Thi L H; Quyen, Nguyen T; Van de Poel, Bram; Mata, Clara I; Nicolaï, Bart M

    2017-01-01

    In this study, the aim is to develop a population model based approach to optimize fruit harvesting strategies with regard to fruit quality and its derived economic value. This approach was applied to the case of tomato fruit harvesting under Vietnamese conditions. Fruit growth and development of tomato (cv. "Savior") was monitored in terms of fruit size and color during both the Vietnamese winter and summer growing seasons. A kinetic tomato fruit growth model was applied to quantify biological fruit-to-fruit variation in terms of their physiological maturation. This model was successfully calibrated. Finally, the model was extended to translate the fruit-to-fruit variation at harvest into the economic value of the harvested crop. It can be concluded that a model based approach to the optimization of harvest date and harvest frequency with regard to economic value of the crop as such is feasible. This approach allows growers to optimize their harvesting strategy by harvesting the crop at more uniform maturity stages meeting the stringent retail demands for homogeneous high quality product. The total farm profit would still depend on the impact a change in harvesting strategy might have on related expenditures. This model based harvest optimisation approach can be easily transferred to other fruit and vegetable crops improving homogeneity of the postharvest product streams.

  20. 32P assessed phosphate uptake by tomato plants Hebros in relation to soil nutrient substance supplies

    International Nuclear Information System (INIS)

    Stoyanova, I.; Rankov, V.; Dimitrov, G.

    1978-01-01

    The uptake of phosphates by tomato plants, cv.Hebros, was assessed by 32 P in a vegetation pot experiment. Leached meadow-cinnamon soil was used, taken from a stationary field experiment to which, for a period of eight years, various rates of NPK were applied. As a result of that significant changes occurred in the soil nutrient substance supplies (concerning total and mobile forms of nitrogen, phosphorus, potassium, pH and salts concentration). It was established that the coefficient of phasphate utilization by tomato plants was the highest (19.15%) on soil receiving a N 210 P 210 K 210 fertilizer application. Long-term fertilization with higher rates at a 1:1:1 NPK ratio increased the content of nutrient substances in the soil, but the coefficient of utilization of available phosphate diminished and was lowest (11.40%) in the case when a N 960 P 960 K 720 mineral fertilizer rate was applied. Following prolonged mineral fertilization with growing N rates (from 240 up to 720 kg/ha) at a background of P 720 K 210 , the coefficient of phosphate utilization by tomato plants also diminished from 16.16 to 12.26%. (author)

  1. High relative humidity pre-harvest reduces post-harvest proliferation of Salmonella in tomatoes.

    Science.gov (United States)

    Devleesschauwer, Brecht; Marvasi, Massimiliano; Giurcanu, Mihai C; Hochmuth, George J; Speybroeck, Niko; Havelaar, Arie H; Teplitski, Max

    2017-09-01

    Outbreaks of human illness caused by enteric pathogens such as Salmonella are increasingly linked to the consumption of fruits and vegetables. Knowledge on the factors affecting Salmonella proliferation on fresh produce therefore becomes increasingly important to safeguard public health. Previous experiments showed a limited impact of pre-harvest production practices on Salmonella proliferation on tomatoes, but suggested a significant effect of harvest time. We explored the data from two previously published and one unpublished experiment using regression trees, which allowed overcoming the interpretational difficulties of classical statistical models with higher order interactions. We assessed the effect of harvest time by explicitly modeling the climatic conditions at harvest time and by performing confirmatory laboratory experiments. Across all datasets, regression trees confirmed the dominant effect of harvest time on Salmonella proliferation, with humidity-related factors emerging as the most important underlying climatic factors. High relative humidity the week prior to harvest was consistently associated with lower Salmonella proliferation. A controlled lab experiment confirmed that tomatoes containing their native epimicrobiota supported significantly lower Salmonella proliferation when incubated at higher humidity prior to inoculation. The complex interactions between environmental conditions and the native microbiota of the tomato crop remain to be fully understood. Copyright © 2017 Elsevier Ltd. All rights reserved.

  2. AP2/ERF Transcription Factors Involved in Response to Tomato Yellow Leaf Curly Virus in Tomato

    Directory of Open Access Journals (Sweden)

    Ying Huang

    2016-07-01

    Full Text Available Tomato yellow leaf curly virus (TYLCV, transmitted by the whitefly (, causes leaf curling and yellowing, plant dwarfism, and growth inhibition in tomato ( L.. The APETALA2 (AP2 and ethylene response factor (ERF transcription factor (TF family, the largest plant-specific TF family, was identified to function in plant development and pathogen defense. Our study aimed to analyze the mechanism underlying the function of ERF (SlERF TFs in response to TYLCV infection and improve useful information to increase the resistance to TYLCV in tomato. A total of 22 tomato AP2/ERF TFs in response to TYLCV were identified according to transcriptome database. Five ERF-B3 TFs were identified in cultivars Hongbeibei (highly resistant, Zheza-301, Zhefen-702 (both resistant, Jinpeng-1, and Xianke-6 (both susceptible. Interaction network indicated that SlERF TFs could interact with mitogen-activated protein kinase (MAPK. Expression profiles of five ERF-B3 genes (, , , , and were detected by quantitative real-time–polymerase chain reaction (qRT-PCR after TYLCV infection in five tomato cultivars. expression was upregulated in five tomato cultivars. The expressions of three genes (, , and were upregulated in Zheza-301 and Zhefen-702. and expressions were downregulated in Hongbeibei and Xianke-6, respectively. Yeast one-hybrid showed that the GCC-box binding ability of ERF-B3 TFs differed in resistant and susceptible tomato cultivars. Expression profiles were related to the GCC-box binding ability of SlERF TFs in resistant and susceptible tomato cultivars. The defense mechanism underlying the tomato’s response to TYLCV involved a complicated network, which provided important information for us in breeding and genetic analysis.

  3. Pepino mosaic virus and Tomato chlorosis virus causing mixed infection in protected tomato crops in Sicily

    Directory of Open Access Journals (Sweden)

    SALVATORE DAVINO

    2008-07-01

    Full Text Available An unusual virus-like yellow leaf disorder associated with fruit marbling was observed during the winter of 2005 in some greenhouse tomato crops in the province of Ragusa Sicily (Southern Italy. Leaf samples from 250 symptomatic tomato plants were serologically tested by DAS-ELISA technique for 5 viruses: Tomato spotted wilt virus (TSWV, Impatiens necrotic spot virus (INSV, Tobacco mosaic virus (TMV, Cucumber mosaic virus (CMV and Pepino mosaic virus (PepMV. PepMV was detected in 215 of the samples. The virus was mechanically transmitted to cucumber, wild metel, wild tobacco and ‘Rio Grande’ tomato. The experimental host range of PepMV-Ragusa differed from that of the PepMV found in Sardinia in 2001, which infected ‘Camone’ tomato. By applying RT-PCR to 25 PepMV-infected tomato plants, the expected 844 bp DNA fragment for PepMV and the expected 439 bp DNA fragment for Tomato chlororis virus (ToCV were obtained from all the samples tested. Sequences of the obtained amplicons were used to study the phylogenetic relationships of the viruses with isolates from other countries. Nucleotide sequence alignments showed that the sequence CP-PepMV-Ragusa (Genbank acc. No. DQ 517884 were 99% homologous with both US2 and Spain-Murcia isolates, while those of ToCV-Ragusa (Genbank acc. No. DQ517885 isolate HSP70, were 99% homologous with the Florida isolate, and 98% with the Lebanon isolate. The results proved that the unusual disorder found in greenhouse tomatoes in Sicily can be associated with infections by PepMV and ToCV, reported for the first time in a mixed infection.

  4. A Novel Architecture of Metadata Management System Based on Intelligent Cache

    Institute of Scientific and Technical Information of China (English)

    SONG Baoyan; ZHAO Hongwei; WANG Yan; GAO Nan; XU Jin

    2006-01-01

    This paper introduces a novel architecture of metadata management system based on intelligent cache called Metadata Intelligent Cache Controller (MICC). By using an intelligent cache to control the metadata system, MICC can deal with different scenarios such as splitting and merging of queries into sub-queries for available metadata sets in local, in order to reduce access time of remote queries. Application can find results patially from local cache and the remaining portion of the metadata that can be fetched from remote locations. Using the existing metadata, it can not only enhance the fault tolerance and load balancing of system effectively, but also improve the efficiency of access while ensuring the access quality.

  5. Effect of Selenium on Control of Postharvest Gray Mold of Tomato Fruit and the Possible Mechanisms Involved

    Science.gov (United States)

    Wu, Zhilin; Yin, Xuebin; Bañuelos, Gary S.; Lin, Zhi-Qing; Zhu, Zhu; Liu, Ying; Yuan, Linxi; Li, Miao

    2016-01-01

    Selenium (Se) has important benefits for crop growth and stress tolerance at low concentrations. However, there is very little information on antimicrobial effect of Se against the economically important fungus Botrytis cinerea. In the present study, using sodium selenite as Se source, we investigated the effect of Se salts on spore germination and mycelial growth of the fungal pathogen in vitro and gray mold control in harvested tomato fruit. Se treatment at 24 mg/L significantly inhibited spore germination of the fungal pathogen and effectively controlled gray mold in harvested tomato fruit. Se treatment at 24 mg/L seems to induce the generation of intracellular reactive oxygen species in the fungal spores. The membrane integrity damage was observed with fluorescence microscopy following staining with propidium iodide after treatment of the spores with Se. These results suggest that Se has the potential for controlling gray mold rot of tomato fruits and might be useful in integrated control against gray mold disease of postharvest fruits and vegetables caused by B. cinerea. The mechanisms by which Se decreased gray mold decay of tomato fruit may be directly related to the severe damage to the conidia plasma membrane and loss of cytoplasmic materials from the hyphae. PMID:26779128

  6. Changes in Polyphenols Contents and Antioxidant Capacities of Organically and Conventionally Cultivated Tomato (Solanum lycopersicum L. Fruits during Ripening

    Directory of Open Access Journals (Sweden)

    Dea Anton

    2017-01-01

    Full Text Available Polyphenols of fruits and vegetables form an important part of human dietary compounds. Relatively little is known about accumulation of phenolics during fruits ripening process. The goal of this work was to study the changes in antioxidant activity and in content of 30 polyphenols during ripening of tomato fruits. Five organically and conventionally grown tomato cultivars were investigated at three different ripening stages. Phenolic compounds were extracted with methanol and extracts were analyzed by HPLC-DAD-MS/MS. During ripening, four different changing patterns were observed: (1 high level in green fruits with minimal changes; (2 continuous increase with maximum level in red-ripe fruits; (3 decrease; (4 increase and achieving maximum level at half-ripe stage. Similar change patterns were found for organic and conventional fruits. The accumulation patterns of phenolic compounds were similar in standard-type tomatoes but differed in several cases in cherry-type cultivar. Although contents of some polyphenols decreased during ripening, total phenolics and free radical scavenging activity increased in all studied cultivars and in case of both cultivation modes. The changes in content of phenolic compounds during ripening were greatly influenced by cultivars, but cultivation mode had only minor impact on dynamics in polyphenols contents in tomato fruits.

  7. Effect of the Application of Gibberellin (GA3 on Tomato Seed Germination (Solanum Lycopersicum L. Variety Santa Cruz

    Directory of Open Access Journals (Sweden)

    Yuli Alexandra Deaquiz-Oyola

    2013-12-01

    Full Text Available The tomato is one of the most important vegetable, economical and nutritionally, around the world. For this reason the germination process in the tomato is a vital stage in the growth and development of plants. In this study, the effect of different doses of gibberellin over the germination of Santa Cruz variety tomato seeds was evaluated. The seeds were embedded for 24 hours in different concentrations of gibberellic acid, sown in a peat substrate in the screen house of the UPTC. A complete randomized design was used with 4 treatments corresponding to 0, 100, 200 and 400 mg L-1 of GAs with three replicates, for a total of 12 experimental units (EU, and each unit with 35 seeds. The treatment of 0 mg L-1 had a favorable impact on the mean germination time (GT, average speed of germination (ASG and germination percentage (GP, showing significant differences with respect to the other treatments. The seeds soaked in 400 mg L-1 of GAs presented the lowest values in the variables GT, ASG and GP, attributed to negative effect this type of hormone over this tomato variety, which delayed the death of the embryo and the seed germination.

  8. Effect of selenium on control of postharvest gray mould of tomato fruit and the possible mechanisms involved

    Directory of Open Access Journals (Sweden)

    Zhilin eWu

    2016-01-01

    Full Text Available Selenium (Se has important benefits for crop growth and stress tolerance at low concentrations. However, there is very little information on antimicrobial effect of selenium against the economically important fungus Botrytis cinerea. In the present study, using sodium selenite as Se source, we investigated the effect of Se salts on spore germination and mycelial growth of the fungal pathogen in vitro and gray mould control in harvested tomato fruit. Se treatment at 24 mg/L significantly inhibited spore germination of the fungal pathogen and effectively controlled gray mould in harvested tomato fruit. Se treatment at 24 mg/L seems to induce the generation of intracellular reactive oxygen species in the fungal spores. The membrane integrity damage was observed with fluorescence microscopy following staining with propidium iodide after treatment of the spores with Se. These results suggest that Se has the potential for controlling gray mould rot of tomato fruits and might be useful in integrated control against gray mould disease of postharvest fruits and vegetables caused by B. cinerea. The mechanisms by which Se decreased gray mould decay of tomato fruit may be directly related to the severe damage to the conidia plasma membrane and loss of cytoplasmic materials from the hyphae.

  9. An Assessment of the Evolving Common Metadata Repository Standards for Airborne Field Campaigns

    Science.gov (United States)

    Northup, E. A.; Chen, G.; Early, A. B.; Beach, A. L., III; Walter, J.; Conover, H.

    2016-12-01

    The NASA Earth Venture Program has led to a dramatic increase in airborne observations, requiring updated data management practices with clearly defined data standards and protocols for metadata. While the current data management practices demonstrate some success in serving airborne science team data user needs, existing metadata models and standards such as NASA's Unified Metadata Model (UMM) for Collections (UMM-C) present challenges with respect to accommodating certain features of airborne science metadata. UMM is the model implemented in the Common Metadata Repository (CMR), which catalogs all metadata records for NASA's Earth Observing System Data and Information System (EOSDIS). One example of these challenges is with representation of spatial and temporal metadata. In addition, many airborne missions target a particular geophysical event, such as a developing hurricane. In such cases, metadata about the event is also important for understanding the data. While coverage of satellite missions is highly predictable based on orbit characteristics, airborne missions feature complicated flight patterns where measurements can be spatially and temporally discontinuous. Therefore, existing metadata models will need to be expanded for airborne measurements and sampling strategies. An Airborne Metadata Working Group was established under the auspices of NASA's Earth Science Data Systems Working Group (ESDSWG) to identify specific features of airborne metadata that can not be currently represented in the UMM and to develop new recommendations. The group includes representation from airborne data users and providers. This presentation will discuss the challenges and recommendations in an effort to demonstrate how airborne metadata curation/management can be improved to streamline data ingest and discoverability to a broader user community.

  10. Extraction of CT dose information from DICOM metadata: automated Matlab-based approach.

    Science.gov (United States)

    Dave, Jaydev K; Gingold, Eric L

    2013-01-01

    The purpose of this study was to extract exposure parameters and dose-relevant indexes of CT examinations from information embedded in DICOM metadata. DICOM dose report files were identified and retrieved from a PACS. An automated software program was used to extract from these files information from the structured elements in the DICOM metadata relevant to exposure. Extracting information from DICOM metadata eliminated potential errors inherent in techniques based on optical character recognition, yielding 100% accuracy.

  11. Improving Access to NASA Earth Science Data through Collaborative Metadata Curation

    Science.gov (United States)

    Sisco, A. W.; Bugbee, K.; Shum, D.; Baynes, K.; Dixon, V.; Ramachandran, R.

    2017-12-01

    The NASA-developed Common Metadata Repository (CMR) is a high-performance metadata system that currently catalogs over 375 million Earth science metadata records. It serves as the authoritative metadata management system of NASA's Earth Observing System Data and Information System (EOSDIS), enabling NASA Earth science data to be discovered and accessed by a worldwide user community. The size of the EOSDIS data archive is steadily increasing, and the ability to manage and query this archive depends on the input of high quality metadata to the CMR. Metadata that does not provide adequate descriptive information diminishes the CMR's ability to effectively find and serve data to users. To address this issue, an innovative and collaborative review process is underway to systematically improve the completeness, consistency, and accuracy of metadata for approximately 7,000 data sets archived by NASA's twelve EOSDIS data centers, or Distributed Active Archive Centers (DAACs). The process involves automated and manual metadata assessment of both collection and granule records by a team of Earth science data specialists at NASA Marshall Space Flight Center. The team communicates results to DAAC personnel, who then make revisions and reingest improved metadata into the CMR. Implementation of this process relies on a network of interdisciplinary collaborators leveraging a variety of communication platforms and long-range planning strategies. Curating metadata at this scale and resolving metadata issues through community consensus improves the CMR's ability to serve current and future users and also introduces best practices for stewarding the next generation of Earth Observing System data. This presentation will detail the metadata curation process, its outcomes thus far, and also share the status of ongoing curation activities.

  12. DESIGN AND PRACTICE ON METADATA SERVICE SYSTEM OF SURVEYING AND MAPPING RESULTS BASED ON GEONETWORK

    Directory of Open Access Journals (Sweden)

    Z. Zha

    2012-08-01

    Full Text Available Based on the analysis and research on the current geographic information sharing and metadata service,we design, develop and deploy a distributed metadata service system based on GeoNetwork covering more than 30 nodes in provincial units of China.. By identifying the advantages of GeoNetwork, we design a distributed metadata service system of national surveying and mapping results. It consists of 31 network nodes, a central node and a portal. Network nodes are the direct system metadata source, and are distributed arround the country. Each network node maintains a metadata service system, responsible for metadata uploading and management. The central node harvests metadata from network nodes using OGC CSW 2.0.2 standard interface. The portal shows all metadata in the central node, provides users with a variety of methods and interface for metadata search or querying. It also provides management capabilities on connecting the central node and the network nodes together. There are defects with GeoNetwork too. Accordingly, we made improvement and optimization on big-amount metadata uploading, synchronization and concurrent access. For metadata uploading and synchronization, by carefully analysis the database and index operation logs, we successfully avoid the performance bottlenecks. And with a batch operation and dynamic memory management solution, data throughput and system performance are significantly improved; For concurrent access, , through a request coding and results cache solution, query performance is greatly improved. To smoothly respond to huge concurrent requests, a web cluster solution is deployed. This paper also gives an experiment analysis and compares the system performance before and after improvement and optimization. Design and practical results have been applied in national metadata service system of surveying and mapping results. It proved that the improved GeoNetwork service architecture can effectively adaptive for

  13. Flexible Authoring of Metadata for Learning : Assembling forms from a declarative data and view model

    OpenAIRE

    Enoksson, Fredrik

    2011-01-01

    With the vast amount of information in various formats that is produced today it becomes necessary for consumers ofthis information to be able to judge if it is relevant for them. One way to enable that is to provide information abouteach piece of information, i.e. provide metadata. When metadata is to be edited by a human being, a metadata editorneeds to be provided. This thesis describes the design and practical use of a configuration mechanism for metadataeditors called annotation profiles...

  14. CHARACTERISTICS AND PHENOTYPICAL VARIABILITY OF TOMATO INITIAL BREEDING MATERIAL ACCORDING TO THE MAIN ECONOMICALLY VALUABLE TRAITS AND PROPERTIES

    Directory of Open Access Journals (Sweden)

    R. K. Rechets

    2016-01-01

    Full Text Available The market of Moldova has a large assortment of seed of foreign selection, such as large-fruited tomatoes, cherry and cocktail tomato. Therefore, it is necessary to launch the breeding program for hybrid development of local origin tomato typed, such as ‘Cherry’ and ‘Cocktail’ with a different form, mass and fruit color. Initially, 15 parental forms of tomato were studied for the main economically valuable traits in the open field condition. Phenotypic variation in tomato varieties and breeding accession was identified depending on the terms of cultivation. Such varieties and lines of tomato as ‘Trapesa’, ‘Rosovaya Kapelka’, ‘Seniyorita’, ‘Ocharovaniye’, ‘L. 46/06’, ‘L. 49/09’, ‘L 295/09,’ ‘L. 336/11’, ‘L. 354/11’, ‘L. 357/11’, ‘L. 388/09 (nor’, ‘L.498 (released by TARI, ‘Tigris’, ‘Vishnya Zheltaya’ (released by OOO ‘Gavrish’, ‘Denezhnoye Derevo’ (national breeding program were used as the initial breeding material. Totally, 15 breeding accessions were used for the study, where all of them differed in the type of bush (determinate and indeterminate; a vegetation period (ultra-early, early, middle, late; a form (roundish, oval; a fruit color (red, pink, black, orange, tiger and with a NOR gene; a fruit weight (from 10 g and above; a structure of brush (dense, loose. Lines and varieties of tomato of different terms of ripening characterized by the shortened internode, high fruit setting on the bush, high content of biologically active substances, and complex resistance to diseases were used to breed tomato hybrids of ‘cherry’ and ‘cocktail’ types with different fruit form and color.

  15. 21 CFR 156.145 - Tomato juice.

    Science.gov (United States)

    2010-04-01

    ...). The food is preserved by heat sterilization (canning), refrigeration, or freezing. When sealed in a... 21 Food and Drugs 2 2010-04-01 2010-04-01 false Tomato juice. 156.145 Section 156.145 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN...

  16. Enhanced regeneration in explants of tomato (Lycopersicon ...

    African Journals Online (AJOL)

    USER

    2010-06-14

    Jun 14, 2010 ... The development of a cost effective and efficient protocol for mass propagation of high quality tomato seedlings via tissue culture could help to reduce the price per seedling. A good in vitro plant regeneration system may also assist in further improvement of the commercially important cultivars for disease.

  17. Peroxidase gene expression during tomato fruit ripening

    International Nuclear Information System (INIS)

    Biggs, M.S.; Flurkey, W.H.; Handa, A.K.

    1987-01-01

    Auxin oxidation has been reported to play a critical role in the initiation of pear fruit ripening and a tomato fruit peroxidase (POD) has been shown to have IAA-oxidase activity. However, little is known about changes in the expression of POD mRNA in tomato fruit development. They are investigating the expression of POD mRNA during tomato fruit maturation. Fruit pericarp tissues from six stages of fruit development and ripening (immature green, mature green, breaker, turning, ripe, and red ripe fruits) were used to extract poly (A) + RNAs. These RNAs were translated in vitro in a rabbit reticulocyte lysate system using L- 35 S-methionine. The 35 S-labeled products were immunoprecipitated with POD antibodies to determine the relative proportions of POD mRNA. High levels of POD mRNA were present in immature green and mature green pericarp, but declined greatly by the turning stage of fruit ripening. In addition, the distribution of POD mRNA on free vs bound polyribosomes will be presented, as well as the presence or absence of POD mRNA in other tomato tissues

  18. Temperature field for radiative tomato peeling

    International Nuclear Information System (INIS)

    Cuccurullo, G; Giordano, L

    2017-01-01

    Nowadays peeling of tomatoes is performed by using steam or lye, which are expensive and polluting techniques, thus sustainable alternatives are searched for dry peeling and, among that, radiative heating seems to be a fairly promising method. This paper aims to speed up the prediction of surface temperatures useful for realizing dry-peeling, thus a 1D-analytical model for the unsteady temperature field in a rotating tomato exposed to a radiative heating source is presented. Since only short times are of interest for the problem at hand, the model involves a semi-infinite slab cooled by convective heat transfer while heated by a pulsating heat source. The model being linear, the solution is derived following the Laplace Transform method. A 3D finite element model of the rotating tomato is introduced as well in order to validate the analytical solution. A satisfactory agreement is attained. Therefore, two different ways to predict the onset of the peeling conditions are available which can be of help for proper design of peeling plants. Particular attention is paid to study surface temperature uniformity, that being a critical parameter for realizing an easy tomato peeling. (paper)

  19. Tomato leaves methanol extract possesses antiinflammatory activity ...

    African Journals Online (AJOL)

    Recently, the leaves of tomato plant that contained several active compounds including alkaloid, steroid and flavanoid has been used for the treatment of variety of diseases and as anti-cancer, antioxidant and anti-gout. Although, a number of pharmacological properties have already been demonstrated, the ...

  20. Genetic (in)stability in tomato

    NARCIS (Netherlands)

    Wisman, E.

    1993-01-01

    In the present study tomato lines carrying unstable alleles of the loci yv or sulfurea were characterized. In addition, we aimed at the isolation of an endogenous transposable element supposedly active in the unstable lines. Since the unstable loci were not cloned, we

  1. How to grasp a ripe tomato

    NARCIS (Netherlands)

    Verhagen, L.

    2012-01-01

    Fortunately, we don’t have to think about this when we are standing in the supermarket after a busy day. We adjust our grip without effort, making sure we don’t squish an overripe tomato, while we firmly grasp a hard green one. This is actually a complex task in which humans are surprisingly

  2. Nitrogen determination on tomato ( Lycopersicon esculentum Mill ...

    African Journals Online (AJOL)

    In order to investigate the effectiveness of a new method based on color image analysis and the Minolta SPAD-502 chlorophyll meter for the diagnosis of nitrogen deficiencies of tomato seedlings, a field experiment was conducted. In this study, five levels of nitrogen fertilization were established so as to induce nitrogen ...

  3. Response of Pratylenchus spp Infected Tomato ( Lycopersicon ...

    African Journals Online (AJOL)

    The need to reduce the negative impact of synthetic nematicides on the environment necessitated the search for bio-pesticides. This study was conducted to evaluate the nematicidal potential of chromatographic fractions from Mangifera indica on tomato in the screenhouse and field. M. indica bark was extracted with ...

  4. Assessment of the nutritional values of genetically modified wheat, corn, and tomato crops.

    Science.gov (United States)

    Venneria, Eugenia; Fanasca, Simone; Monastra, Giovanni; Finotti, Enrico; Ambra, Roberto; Azzini, Elena; Durazzo, Alessandra; Foddai, Maria Stella; Maiani, Giuseppe

    2008-10-08

    The genetic modification in fruit and vegetables could lead to changes in metabolic pathways and, therefore, to the variation of the molecular pattern, with particular attention to antioxidant compounds not well-described in the literature. The aim of the present study was to compare the quality composition of transgenic wheat ( Triticum durum L.), corn ( Zea mays L.), and tomato ( Lycopersicum esculentum Mill.) to the nontransgenic control with a similar genetic background. In the first experiment, Ofanto wheat cultivar containing the tobacco rab1 gene and nontransgenic Ofanto were used. The second experiment compared two transgenic lines of corn containing Bacillus thuringiensis "Cry toxin" gene (PR33P67 and Pegaso Bt) to their nontransgenic forms. The third experiment was conducted on transgenic tomato ( Lycopersicum esculentum Mill.) containing the Agrobacterium rhizogenes rolD gene and its nontransgenic control (cv. Tondino). Conventional and genetically modified crops were compared in terms of fatty acids content, unsaponifiable fraction of antioxidants, total phenols, polyphenols, carotenoids, vitamin C, total antioxidant activity, and mineral composition. No significant differences were observed for qualitative traits analyzed in wheat and corn samples. In tomato samples, the total antioxidant activity (TAA), measured by FRAP assay, and the naringenin content showed a lower value in genetically modified organism (GMO) samples (0.35 mmol of Fe (2+) 100 g (-1) and 2.82 mg 100 g (-1), respectively), in comparison to its nontransgenic control (0.41 mmol of Fe (2+) 100 g (-1) and 4.17 mg 100 g (-1), respectively). On the basis of the principle of substantial equivalence, as articulated by the World Health Organization, the Organization for Economic Cooperation and Development, and the United Nations Food and Agriculture Organization, these data support the conclusion that GM events are nutritionally similar to conventional varieties of wheat, corn, and tomato on

  5. Impact of Magnetic Treatment of Irrigation Water on the Growth and Yield of Tomato

    Directory of Open Access Journals (Sweden)

    Kamorudeen Olaniyi YUSUF

    2015-09-01

    Full Text Available This study was carried out to determine whether magnetic treatment of the irrigation water may actually enhance vegetative growth and yield of tomato. Three magnetic flux densities of 124, 319 and 719 G (treatments T1, T2 and T3 were used to treat the water and a control experiment (Tc which was irrigated with non-magnetically treated water was also set up. The magnetic field was produced by an electromagnet that had a variable voltage unit varying the voltage from 4 to 12 V. The tomato were planted in buckets, kept in a transparent garden shed for 130 days and irrigated with magnetically treated water and non-magnetically treated water. A completely randomized design experimental layout was used in this study and each of the three treatments was replicated seven times. The results indicated that tomato crop irrigated with magnetically treated water grew faster than that of the non-magnetically treated water and the stem diameters were bigger than those of control. The heights of tomato plants (T1, T2 T3 and Tc after 47 days were 560.0, 556.4, 588.6 and 469.3 mm respectively. The total yield after 130 days of survey for T1, T2 T3 and Tc were 892.1, 1075.8, 1045.7 and 637.7 g respectively. The percentage increment in yield from the plants treated with magnetically treated water varied from 39.9 to 68.7% compared to the yield from untreated water.

  6. Studies of Big Data metadata segmentation between relational and non-relational databases

    Science.gov (United States)

    Golosova, M. V.; Grigorieva, M. A.; Klimentov, A. A.; Ryabinkin, E. A.; Dimitrov, G.; Potekhin, M.

    2015-12-01

    In recent years the concepts of Big Data became well established in IT. Systems managing large data volumes produce metadata that describe data and workflows. These metadata are used to obtain information about current system state and for statistical and trend analysis of the processes these systems drive. Over the time the amount of the stored metadata can grow dramatically. In this article we present our studies to demonstrate how metadata storage scalability and performance can be improved by using hybrid RDBMS/NoSQL architecture.

  7. Studies of Big Data metadata segmentation between relational and non-relational databases

    CERN Document Server

    Golosova, M V; Klimentov, A A; Ryabinkin, E A; Dimitrov, G; Potekhin, M

    2015-01-01

    In recent years the concepts of Big Data became well established in IT. Systems managing large data volumes produce metadata that describe data and workflows. These metadata are used to obtain information about current system state and for statistical and trend analysis of the processes these systems drive. Over the time the amount of the stored metadata can grow dramatically. In this article we present our studies to demonstrate how metadata storage scalability and performance can be improved by using hybrid RDBMS/NoSQL architecture.

  8. Defense Virtual Library: Technical Metadata for the Long-Term Management of Digital Materials: Preliminary Guidelines

    National Research Council Canada - National Science Library

    Flynn, Marcy

    2002-01-01

    ... of the digital materials being preserved. This report, prepared by Silver Image Management (SIM), proposes technical metadata elements appropriate for digital objects in the Defense Virtual Library...

  9. A Shared Infrastructure for Federated Search Across Distributed Scientific Metadata Catalogs

    Science.gov (United States)

    Reed, S. A.; Truslove, I.; Billingsley, B. W.; Grauch, A.; Harper, D.; Kovarik, J.; Lopez, L.; Liu, M.; Brandt, M.

    2013-12-01

    The vast amount of science metadata can be overwhelming and highly complex. Comprehensive analysis and sharing of metadata is difficult since institutions often publish to their own repositories. There are many disjoint standards used for publishing scientific data, making it difficult to discover and share information from different sources. Services that publish metadata catalogs often have different protocols, formats, and semantics. The research community is limited by the exclusivity of separate metadata catalogs and thus it is desirable to have federated search interfaces capable of unified search queries across multiple sources. Aggregation of metadata catalogs also enables users to critique metadata more rigorously. With these motivations in mind, the National Snow and Ice Data Center (NSIDC) and Advanced Cooperative Arctic Data and Information Service (ACADIS) implemented two search interfaces for the community. Both the NSIDC Search and ACADIS Arctic Data Explorer (ADE) use a common infrastructure which keeps maintenance costs low. The search clients are designed to make OpenSearch requests against Solr, an Open Source search platform. Solr applies indexes to specific fields of the metadata which in this instance optimizes queries containing keywords, spatial bounds and temporal ranges. NSIDC metadata is reused by both search interfaces but the ADE also brokers additional sources. Users can quickly find relevant metadata with minimal effort and ultimately lowers costs for research. This presentation will highlight the reuse of data and code between NSIDC and ACADIS, discuss challenges and milestones for each project, and will identify creation and use of Open Source libraries.

  10. Improving Scientific Metadata Interoperability And Data Discoverability using OAI-PMH

    Science.gov (United States)

    Devarakonda, Ranjeet; Palanisamy, Giri; Green, James M.; Wilson, Bruce E.

    2010-12-01

    While general-purpose search engines (such as Google or Bing) are useful for finding many things on the Internet, they are often of limited usefulness for locating Earth Science data relevant (for example) to a specific spatiotemporal extent. By contrast, tools that search repositories of structured metadata can locate relevant datasets with fairly high precision, but the search is limited to that particular repository. Federated searches (such as Z39.50) have been used, but can be slow and the comprehensiveness can be limited by downtime in any search partner. An alternative approach to improve comprehensiveness is for a repository to harvest metadata from other repositories, possibly with limits based on subject matter or access permissions. Searches through harvested metadata can be extremely responsive, and the search tool can be customized with semantic augmentation appropriate to the community of practice being served. However, there are a number of different protocols for harvesting metadata, with some challenges for ensuring that updates are propagated and for collaborations with repositories using differing metadata standards. The Open Archive Initiative Protocol for Metadata Handling (OAI-PMH) is a standard that is seeing increased use as a means for exchanging structured metadata. OAI-PMH implementations must support Dublin Core as a metadata standard, with other metadata formats as optional. We have developed tools which enable our structured search tool (Mercury; http://mercury.ornl.gov) to consume metadata from OAI-PMH services in any of the metadata formats we support (Dublin Core, Darwin Core, FCDC CSDGM, GCMD DIF, EML, and ISO 19115/19137). We are also making ORNL DAAC metadata available through OAI-PMH for other metadata tools to utilize, such as the NASA Global Change Master Directory, GCMD). This paper describes Mercury capabilities with multiple metadata formats, in general, and, more specifically, the results of our OAI-PMH implementations and

  11. The Theory and Implementation for Metadata in Digital Library/Museum

    Directory of Open Access Journals (Sweden)

    Hsueh-hua Chen

    1998-12-01

    Full Text Available Digital Libraries and Museums (DL/M have become one of the important research issues of Library and Information Science as well as other related fields. This paper describes the basic concepts of DL/M and briefly introduces the development of Taiwan Digital Museum Project. Based on the features of various collections, wediscuss how to maintain, to manage and to exchange metadata, especially from the viewpoint of users. We propose the draft of metadata, MICI (Metadata Interchange for Chinese Information , developed by ROSS (Resources Organization and SearchingSpecification team. Finally, current problems and future development of metadata will be touched.[Article content in Chinese

  12. Antioxidant activities of various fruits and vegetables produced in Taiwan.

    Science.gov (United States)

    Huang, Hui-Yu; Chang, Chen-Kang; Tso, Tim K; Huang, Ju-Jen; Chang, Wei-Wei; Tsai, Ying-Chieh

    2004-08-01

    Fruits and vegetables have been known to contain a variety of antioxidant components. It has been suggested that antioxidants may protect biomolecules from oxidative damage and therefore be associated with reduced risks of cardiovascular disease and certain cancer. The antioxidant abilities of various parts of eight common fruits and vegetables produced in Taiwan were investigated, including tomato, guava, squash, tangerine, wax gourd, pineapple, chayote, and eggplant. Squash, wax gourd, tomato, and guava seeds showed the highest antioxidant activities in thiobarbituric acid assay. Wax guard and squash seeds showed the highest antioxidant activities in iodometric assay. At the level of 1 g fresh sample, low-density lipoprotein peroxidation was inhibited by at least 90% by tomato meat, guava meat, squash seed, wax gourd meat, core, and seed, and eggplant skin. The total phenolic content was significantly correlated with antioxidant activities measured by thiobarbituric acid (r=0.715, P<0.01) and iodometric (r=0.749, P<0.01) assays. The results of this study could be used for development of merchandise with potential health benefits from agricultural products.

  13. Influence of Heat Treatments on Carotenoid Content of Cherry Tomatoes

    Directory of Open Access Journals (Sweden)

    Laura D'Evoli

    2013-07-01

    Full Text Available Tomatoes and tomato products are rich sources of carotenoids—principally lycopene, followed by β-carotene and lutein. The aim of this work was to study the effect of heat treatment on carotenoid content in cherry tomatoes. Raw and canned products were sampled and analysed; furthermore whole, skin and pulp fractions of cherry tomatoes were analysed when raw and home-processed, in order to better understand heat treatment effects. Lycopene content in canned tomatoes was two-fold higher than in raw tomatoes (11.60 mg/100 g versus 5.12 mg/100 g. Lutein and β-carotene were respectively 0.15 mg/100 g and 0.75 mg/100 g in canned tomatoes versus 0.11 mg/100 g and 1.00 mg/100 g in raw tomatoes. For home-processed tomatoes, β-carotene and lutein showed a content decrease in all thermally treated products. This decrease was more evident for β-carotene in the skin fraction (−17%, while for lutein it was greater in the pulp fraction (−25%. Lycopene presented a different pattern: after heat treatment its concentration increased both in the whole and in pulp fractions, while in the skin fraction it decreased dramatically (−36%. The analysis of the isomers formed during the thermal treatment suggests that lycopene is rather stable inside the tomato matrix.

  14. Accumulation of anthocyanins in tomato skin extends shelf life.

    Science.gov (United States)

    Bassolino, Laura; Zhang, Yang; Schoonbeek, Henk-Jan; Kiferle, Claudia; Perata, Pierdomenico; Martin, Cathie

    2013-11-01

    Shelf life is one of the most important traits for the tomato (Solanum lycopersicum) industry. Two key factors, post-harvest over-ripening and susceptibility to post-harvest pathogen infection, determine tomato shelf life. Anthocyanins accumulate in the skin of Aft/Aft atv/atv tomatoes, the result of introgressing alleles affecting anthocyanin biosynthesis in fruit from two wild relatives of tomato, which results in extended fruit shelf life. Compared with ordinary, anthocyanin-less tomatoes, the fruits of Aft/Aft atv/atv keep longer during storage and are less susceptible to Botrytis cinerea, a major tomato pathogen, post-harvest. Using genetically modified tomatoes over-producing anthocyanins, we confirmed that skin-specific accumulation of anthocyanins in tomato is sufficient to reduce the susceptibility of fruit to Botrytis cinerea. Our data indicate that accumulation of anthocyanins in tomato fruit, achieved either by traditional breeding or genetic engineering can be an effective way to extend tomato shelf life. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

  15. Influence of Heat Treatments on Carotenoid Content of Cherry Tomatoes.

    Science.gov (United States)

    D'Evoli, Laura; Lombardi-Boccia, Ginevra; Lucarini, Massimo

    2013-07-31

    Tomatoes and tomato products are rich sources of carotenoids-principally lycopene, followed by β-carotene and lutein. The aim of this work was to study the effect of heat treatment on carotenoid content in cherry tomatoes. Raw and canned products were sampled and analysed; furthermore whole, skin and pulp fractions of cherry tomatoes were analysed when raw and home-processed, in order to better understand heat treatment effects. Lycopene content in canned tomatoes was two-fold higher than in raw tomatoes (11.60 mg/100 g versus 5.12 mg/100 g). Lutein and β-carotene were respectively 0.15 mg/100 g and 0.75 mg/100 g in canned tomatoes versus 0.11 mg/100 g and 1.00 mg/100 g in raw tomatoes. For home-processed tomatoes, β-carotene and lutein showed a content decrease in all thermally treated products. This decrease was more evident for β-carotene in the skin fraction (-17%), while for lutein it was greater in the pulp fraction (-25%). Lycopene presented a different pattern: after heat treatment its concentration increased both in the whole and in pulp fractions, while in the skin fraction it decreased dramatically (-36%). The analysis of the isomers formed during the thermal treatment suggests that lycopene is rather stable inside the tomato matrix.

  16. Estimation of the nutritive value of tomato pomace for ruminant using ...

    African Journals Online (AJOL)

    Jane

    2011-07-06

    Jul 6, 2011 ... composition and estimation of nutritive value of dried tomato pomace (DTP) using in vitro gas ... of processed products such as tomato juice, paste, puree ..... of feeding ensiled mixed tomato and apple pomace on performance.

  17. Arsenic and Lead Uptake by Vegetable Crops Grown on Historically Contaminated Orchard Soils

    Directory of Open Access Journals (Sweden)

    M. B. McBride

    2013-01-01

    Full Text Available Transfer of Pb and As into vegetables grown on orchard soils historically contaminated by Pb arsenate pesticides was measured in the greenhouse. Lettuce, carrots, green beans, and tomatoes were grown on soils containing a range of total Pb (16.5–915 mg/kg and As (6.9–211 mg/kg concentrations. The vegetables were acid-digested and analyzed for total Pb and As using ICP-mass spectrometry. Vegetable contamination was dependent on soil total Pb and As concentrations, pH, and vegetable species. Arsenic concentrations were the highest in lettuce and green beans, lower in carrots, and much lower in tomato fruit. Transfer of Pb into lettuce and beans was generally lower than that of As, and Pb and As were strongly excluded from tomato fruit. Soil metal concentrations as high as 400 mg/kg Pb and 100 mg/kg As produced vegetables with concentrations of Pb and As below the limits of international health standards.

  18. Building a scalable event-level metadata service for ATLAS

    International Nuclear Information System (INIS)

    Cranshaw, J; Malon, D; Goosens, L; Viegas, F T A; McGlone, H

    2008-01-01

    The ATLAS TAG Database is a multi-terabyte event-level metadata selection system, intended to allow discovery, selection of and navigation to events of interest to an analysis. The TAG Database encompasses file- and relational-database-resident event-level metadata, distributed across all ATLAS Tiers. An oracle hosted global TAG relational database, containing all ATLAS events, implemented in Oracle, will exist at Tier O. Implementing a system that is both performant and manageable at this scale is a challenge. A 1 TB relational TAG Database has been deployed at Tier 0 using simulated tag data. The database contains one billion events, each described by two hundred event metadata attributes, and is currently undergoing extensive testing in terms of queries, population and manageability. These 1 TB tests aim to demonstrate and optimise the performance and scalability of an Oracle TAG Database on a global scale. Partitioning and indexing strategies are crucial to well-performing queries and manageability of the database and have implications for database population and distribution, so these are investigated. Physics query patterns are anticipated, but a crucial feature of the system must be to support a broad range of queries across all attributes. Concurrently, event tags from ATLAS Computing System Commissioning distributed simulations are accumulated in an Oracle-hosted database at CERN, providing an event-level selection service valuable for user experience and gathering information about physics query patterns. In this paper we describe the status of the Global TAG relational database scalability work and highlight areas of future direction

  19. Revision of IRIS/IDA Seismic Station Metadata

    Science.gov (United States)

    Xu, W.; Davis, P.; Auerbach, D.; Klimczak, E.

    2017-12-01

    Trustworthy data quality assurance has always been one of the goals of seismic network operators and data management centers. This task is considerably complex and evolving due to the huge quantities as well as the rapidly changing characteristics and complexities of seismic data. Published metadata usually reflect instrument response characteristics and their accuracies, which includes zero frequency sensitivity for both seismometer and data logger as well as other, frequency-dependent elements. In this work, we are mainly focused studying the variation of the seismometer sensitivity with time of IRIS/IDA seismic recording systems with a goal to improve the metadata accuracy for the history of the network. There are several ways to measure the accuracy of seismometer sensitivity for the seismic stations in service. An effective practice recently developed is to collocate a reference seismometer in proximity to verify the in-situ sensors' calibration. For those stations with a secondary broadband seismometer, IRIS' MUSTANG metric computation system introduced a transfer function metric to reflect two sensors' gain ratios in the microseism frequency band. In addition, a simulation approach based on M2 tidal measurements has been proposed and proven to be effective. In this work, we compare and analyze the results from three different methods, and concluded that the collocated-sensor method is most stable and reliable with the minimum uncertainties all the time. However, for epochs without both the collocated sensor and secondary seismometer, we rely on the analysis results from tide method. For the data since 1992 on IDA stations, we computed over 600 revised seismometer sensitivities for all the IRIS/IDA network calibration epochs. Hopefully further revision procedures will help to guarantee that the data is accurately reflected by the metadata of these stations.

  20. Riparian Vegetation Mapping Along the Hanford Reach

    International Nuclear Information System (INIS)

    FOGWELL, T.W.

    2003-01-01

    to support development of a complete data layer describing riparian vegetation cover types on the Columbia River adjacent to the Hanford Site boundaries. Included with this report are the preliminary riparian vegetation maps and the associated metadata for that GIS layer

  1. A Metadata based Knowledge Discovery Methodology for Seeding Translational Research.

    Science.gov (United States)

    Kothari, Cartik R; Payne, Philip R O

    2015-01-01

    In this paper, we present a semantic, metadata based knowledge discovery methodology for identifying teams of researchers from diverse backgrounds who can collaborate on interdisciplinary research projects: projects in areas that have been identified as high-impact areas at The Ohio State University. This methodology involves the semantic annotation of keywords and the postulation of semantic metrics to improve the efficiency of the path exploration algorithm as well as to rank the results. Results indicate that our methodology can discover groups of experts from diverse areas who can collaborate on translational research projects.

  2. Radiological dose and metadata management; Radiologisches Dosis- und Metadatenmanagement

    Energy Technology Data Exchange (ETDEWEB)

    Walz, M.; Madsack, B. [TUeV SUeD Life Service GmbH, Aerztliche Stelle fuer Qualitaetssicherung in der Radiologie, Nuklearmedizin und Strahlentherapie Hessen, Frankfurt (Germany); Kolodziej, M. [INFINITT Europe GmbH, Frankfurt/M (Germany)

    2016-12-15

    This article describes the features of management systems currently available in Germany for extraction, registration and evaluation of metadata from radiological examinations, particularly in the digital imaging and communications in medicine (DICOM) environment. In addition, the probable relevant developments in this area concerning radiation protection legislation, terminology, standardization and information technology are presented. (orig.) [German] Dieser Artikel stellt die aktuell in Deutschland verfuegbaren Funktionen von Managementsystemen zur Erfassung und Auswertung von Metadaten zu radiologischen Untersuchungen insbesondere im DICOM-Umfeld (Digital Imaging and Communications in Medicine) vor. Ausserdem werden die in diesem Bereich voraussichtlich relevanten Entwicklungen von Strahlenschutzgesetzgebung ueber Terminologie und Standardisierung bis zu informationstechnischen Aspekten dargestellt. (orig.)

  3. Twenty-first century metadata operations challenges, opportunities, directions

    CERN Document Server

    Lee Eden, Bradford

    2014-01-01

    It has long been apparent to academic library administrators that the current technical services operations within libraries need to be redirected and refocused in terms of both format priorities and human resources. A number of developments and directions have made this reorganization imperative, many of which have been accelerated by the current economic crisis. All of the chapters detail some aspect of technical services reorganization due to downsizing and/or reallocation of human resources, retooling professional and support staff in higher level duties and/or non-MARC metadata, ""value-a

  4. A Flexible Online Metadata Editing and Management System

    Energy Technology Data Exchange (ETDEWEB)

    Aguilar, Raul [Arizona State University; Pan, Jerry Yun [ORNL; Gries, Corinna [Arizona State University; Inigo, Gil San [University of New Mexico, Albuquerque; Palanisamy, Giri [ORNL

    2010-01-01

    A metadata editing and management system is being developed employing state of the art XML technologies. A modular and distributed design was chosen for scalability, flexibility, options for customizations, and the possibility to add more functionality at a later stage. The system consists of a desktop design tool or schema walker used to generate code for the actual online editor, a native XML database, and an online user access management application. The design tool is a Java Swing application that reads an XML schema, provides the designer with options to combine input fields into online forms and give the fields user friendly tags. Based on design decisions, the tool generates code for the online metadata editor. The code generated is an implementation of the XForms standard using the Orbeon Framework. The design tool fulfills two requirements: First, data entry forms based on one schema may be customized at design time and second data entry applications may be generated for any valid XML schema without relying on custom information in the schema. However, the customized information generated at design time is saved in a configuration file which may be re-used and changed again in the design tool. Future developments will add functionality to the design tool to integrate help text, tool tips, project specific keyword lists, and thesaurus services. Additional styling of the finished editor is accomplished via cascading style sheets which may be further customized and different look-and-feels may be accumulated through the community process. The customized editor produces XML files in compliance with the original schema, however, data from the current page is saved into a native XML database whenever the user moves to the next screen or pushes the save button independently of validity. Currently the system uses the open source XML database eXist for storage and management, which comes with third party online and desktop management tools. However, access to

  5. Generation of Multiple Metadata Formats from a Geospatial Data Repository

    Science.gov (United States)

    Hudspeth, W. B.; Benedict, K. K.; Scott, S.

    2012-12-01

    The Earth Data Analysis Center (EDAC) at the University of New Mexico is partnering with the CYBERShARE and Environmental Health Group from the Center for Environmental Resource Management (CERM), located at the University of Texas, El Paso (UTEP), the Biodiversity Institute at the University of Kansas (KU), and the New Mexico Geo- Epidemiology Research Network (GERN) to provide a technical infrastructure that enables investigation of a variety of climate-driven human/environmental systems. Two significant goals of this NASA-funded project are: a) to increase the use of NASA Earth observational data at EDAC by various modeling communities through enabling better discovery, access, and use of relevant information, and b) to expose these communities to the benefits of provenance for improving understanding and usability of heterogeneous data sources and derived model products. To realize these goals, EDAC has leveraged the core capabilities of its Geographic Storage, Transformation, and Retrieval Engine (Gstore) platform, developed with support of the NSF EPSCoR Program. The Gstore geospatial services platform provides general purpose web services based upon the REST service model, and is capable of data discovery, access, and publication functions, metadata delivery functions, data transformation, and auto-generated OGC services for those data products that can support those services. Central to the NASA ACCESS project is the delivery of geospatial metadata in a variety of formats, including ISO 19115-2/19139, FGDC CSDGM, and the Proof Markup Language (PML). This presentation details the extraction and persistence of relevant metadata in the Gstore data store, and their transformation into multiple metadata formats that are increasingly utilized by the geospatial community to document not only core library catalog elements (e.g. title, abstract, publication data, geographic extent, projection information, and database elements), but also the processing steps used to

  6. Latest developments for the IAGOS database: Interoperability and metadata

    Science.gov (United States)

    Boulanger, Damien; Gautron, Benoit; Thouret, Valérie; Schultz, Martin; van Velthoven, Peter; Broetz, Bjoern; Rauthe-Schöch, Armin; Brissebrat, Guillaume

    2014-05-01

    In-service Aircraft for a Global Observing System (IAGOS, http://www.iagos.org) aims at the provision of long-term, frequent, regular, accurate, and spatially resolved in situ observations of the atmospheric composition. IAGOS observation systems are deployed on a fleet of commercial aircraft. The IAGOS database is an essential part of the global atmospheric monitoring network. Data access is handled by open access policy based on the submission of research requests which are reviewed by the PIs. Users can access the data through the following web sites: http://www.iagos.fr or http://www.pole-ether.fr as the IAGOS database is part of the French atmospheric chemistry data centre ETHER (CNES and CNRS). The database is in continuous development and improvement. In the framework of the IGAS project (IAGOS for GMES/COPERNICUS Atmospheric Service), major achievements will be reached, such as metadata and format standardisation in order to interoperate with international portals and other databases, QA/QC procedures and traceability, CARIBIC (Civil Aircraft for the Regular Investigation of the Atmosphere Based on an Instrument Container) data integration within the central database, and the real-time data transmission. IGAS work package 2 aims at providing the IAGOS data to users in a standardized format including the necessary metadata and information on data processing, data quality and uncertainties. We are currently redefining and standardizing the IAGOS metadata for interoperable use within GMES/Copernicus. The metadata are compliant with the ISO 19115, INSPIRE and NetCDF-CF conventions. IAGOS data will be provided to users in NetCDF or NASA Ames format. We also are implementing interoperability between all the involved IAGOS data services, including the central IAGOS database, the former MOZAIC and CARIBIC databases, Aircraft Research DLR database and the Jülich WCS web application JOIN (Jülich OWS Interface) which combines model outputs with in situ data for

  7. Improve data integration performance by employing metadata management utility

    Energy Technology Data Exchange (ETDEWEB)

    Wei, M.; Sung, A.H. [New Mexico Petroleum Recovery Research Center, Socorro, NM (United States)

    2005-07-01

    This conference paper explored ways of integrating petroleum and exploration data obtained from different sources in order to provide more comprehensive data for various analysis purposes and to improve the integrity and consistency of integrated data. This paper proposes a methodology to enhance oil and gas industry data integration performance by cooperating data management utilities in Microsoft SQL Server database management system (DBMS) for small scale data integration without support of commercial software. By semi-automatically capturing metadata, data sources are investigated in detail, data quality problems are partially cleansed, and the performance of data integration is improved. 20 refs., 7 tabs., 1 fig.

  8. Evolution of the architecture of the ATLAS Metadata Interface (AMI)

    Science.gov (United States)

    Odier, J.; Aidel, O.; Albrand, S.; Fulachier, J.; Lambert, F.

    2015-12-01

    The ATLAS Metadata Interface (AMI) is now a mature application. Over the years, the number of users and the number of provided functions has dramatically increased. It is necessary to adapt the hardware infrastructure in a seamless way so that the quality of service re - mains high. We describe the AMI evolution since its beginning being served by a single MySQL backend database server to the current state having a cluster of virtual machines at French Tier1, an Oracle database at Lyon with complementary replication to the Oracle DB at CERN and AMI back-up server.

  9. Evolution of the Architecture of the ATLAS Metadata Interface (AMI)

    CERN Document Server

    Odier, Jerome; The ATLAS collaboration; Fulachier, Jerome; Lambert, Fabian

    2015-01-01

    The ATLAS Metadata Interface (AMI) is now a mature application. Over the years, the number of users and the number of provided functions has dramatically increased. It is necessary to adapt the hardware infrastructure in a seamless way so that the quality of service remains high. We describe the evolution from the beginning of the application life, using one server with a MySQL backend database, to the current state in which a cluster of virtual machines on the French Tier 1 cloud at Lyon, an Oracle database also at Lyon, with replication to Oracle at CERN and a back-up server are used.

  10. Response of vegetable seed germination to solar radiation penetrating through soil

    International Nuclear Information System (INIS)

    Hamamoto, H.

    1999-01-01

    Response of vegetable seeds to irradiation and emergence of plants seeded at various depths were investigated to clarify the effects of solar radiation through soil on vegetable seed germination. Seeds of eight vegetable species were germinated in Petri dishes under 11-h irradiation per day. Seed germination was delayed in tomato (Licopersicon esculentum Mill.) but accelerated in perilla (Perilla ocymoides L.) and Japanese hornwort (Cryptotaenia japonica Hassk.) with increase in irradiation at the intensities higher than 0.4W m -2 . Seeds of Japanese radish (Raphanus sativus L.), watermelon (Citrullus lanatus Matsum.), and Chinese cabbage (Brassica campestris L.) showed delayed germination at more than 4-6W m -2 . No effect of irradiation on lettuce (Lactuca sativa L.) and carrot (Daucus carota L.) seed germination was seen. For tomato, Japanese radish and Japanese hornwort, the effects of irradiation time on germination were also investigated. Tomato seed germination was delayed and Japanese hornwort seed germination was accelerated with increase in irradiation time beyond 2h per day. The emergence of tomato and Japanese hornwort covered with Shimokuriyagawa loam soil (Kuriyagawa soil) and vermiculite at depths of less than 5mm, 5-10mm and 10-15mm was observed. Plants emerged more rapidly from 5-10mm depths than from less than 5mm depth in tomato. The plants seeded at 10-15mm depths emerged as rapidly as those at 5-10mm depths using vermiculite but later than those at other depths using Kuriyagawa soil, probably due to high bulk density. The early emergence of Japanese hornwort was fastest from less than 5mm depth. The plants seeded at 5-10mm depths did not emerge much slower than those at less than 5mm depth. A seeding depth of 5-10mm was suitable for the rapid emergence of those vegetables covered with both the soil and vermiculite. (author)

  11. Effect of green spinach (Amaranthus tricolor L.) and tomato (Solanum lycopersicum) addition in physical, chemical, and sensory properties of marshmallow as an alternative prevention of iron deficiency anemia

    Science.gov (United States)

    Yudhistira, B.; Affandi, D. R.; Nusantari, P. N.

    2018-01-01

    Iron deficiency anemia is the most common nutritional disorder in the world. Consuming vegetable which contain iron, including spinach, is an alternative to fulfill iron requirement. Fe will be more easily absorbed in the presence of vitamin C. Tomato is one of vitamin C source that can be used. Spinach can be applied into confectionary products in the form of marshmallow. This research aimed to find out the physical, chemical and sensory properties of green spinach Marshmallow in addition of Tomato, the best formula, and define the category of nutrition contents based on Acuan Label Gizi (ALG). This study used a completely randomized design (CRD) with one factor that was different proportion of spinach:tomato (75%: 25%; 50%: 50%; 25%: 75%). The data were analyzed using One Way Anova with 5% significance level. The result of this study showed that the difference of spinach and tomato proportion affect tensile strength, moisture, ash content, Fe content, crude fiber, vitamin C, color and marshmallow’s flavor. Best marshmallow formulation of 25% spinach in addition of 75% tomato had Fe content of 1.159 mg/100g and vitamin C of 44 mg/100g.

  12. Towards Precise Metadata-set for Discovering 3D Geospatial Models in Geo-portals

    Science.gov (United States)

    Zamyadi, A.; Pouliot, J.; Bédard, Y.

    2013-09-01

    Accessing 3D geospatial models, eventually at no cost and for unrestricted use, is certainly an important issue as they become popular among participatory communities, consultants, and officials. Various geo-portals, mainly established for 2D resources, have tried to provide access to existing 3D resources such as digital elevation model, LIDAR or classic topographic data. Describing the content of data, metadata is a key component of data discovery in geo-portals. An inventory of seven online geo-portals and commercial catalogues shows that the metadata referring to 3D information is very different from one geo-portal to another as well as for similar 3D resources in the same geo-portal. The inventory considered 971 data resources affiliated with elevation. 51% of them were from three geo-portals running at Canadian federal and municipal levels whose metadata resources did not consider 3D model by any definition. Regarding the remaining 49% which refer to 3D models, different definition of terms and metadata were found, resulting in confusion and misinterpretation. The overall assessment of these geo-portals clearly shows that the provided metadata do not integrate specific and common information about 3D geospatial models. Accordingly, the main objective of this research is to improve 3D geospatial model discovery in geo-portals by adding a specific metadata-set. Based on the knowledge and current practices on 3D modeling, and 3D data acquisition and management, a set of metadata is proposed to increase its suitability for 3D geospatial models. This metadata-set enables the definition of genuine classes, fields, and code-lists for a 3D metadata profile. The main structure of the proposal contains 21 metadata classes. These classes are classified in three packages as General and Complementary on contextual and structural information, and Availability on the transition from storage to delivery format. The proposed metadata set is compared with Canadian Geospatial

  13. openPDS: protecting the privacy of metadata through SafeAnswers.

    Directory of Open Access Journals (Sweden)

    Yves-Alexandre de Montjoye

    Full Text Available The rise of smartphones and web services made possible the large-scale collection of personal metadata. Information about individuals' location, phone call logs, or web-searches, is collected and used intensively by organizations and big data researchers. Metadata has however yet to realize its full potential. Privacy and legal concerns, as well as the lack of technical solutions for personal metadata management is preventing metadata from being shared and reconciled under the control of the individual. This lack of access and control is furthermore fueling growing concerns, as it prevents individuals from understanding and managing the risks associated with the collection and use of their data. Our contribution is two-fold: (1 we describe openPDS, a personal metadata management framework that allows individuals to collect, store, and give fine-grained access to their metadata to third parties. It has been implemented in two field studies; (2 we introduce and analyze SafeAnswers, a new and practical way of protecting the privacy of metadata at an individual level. SafeAnswers turns a hard anonymization problem into a more tractable security one. It allows services to ask questions whose answers are calculated against the metadata instead of trying to anonymize individuals' metadata. The dimensionality of the data shared with the services is reduced from high-dimensional metadata to low-dimensional answers that are less likely to be re-identifiable and to contain sensitive information. These answers can then be directly shared individually or in aggregate. openPDS and SafeAnswers provide a new way of dynamically protecting personal metadata, thereby supporting the creation of smart data-driven services and data science research.

  14. Metadata Design in the New PDS4 Standards - Something for Everybody

    Science.gov (United States)

    Raugh, Anne C.; Hughes, John S.

    2015-11-01

    The Planetary Data System (PDS) archives, supports, and distributes data of diverse targets, from diverse sources, to diverse users. One of the core problems addressed by the PDS4 data standard redesign was that of metadata - how to accommodate the increasingly sophisticated demands of search interfaces, analytical software, and observational documentation into label standards without imposing limits and constraints that would impinge on the quality or quantity of metadata that any particular observer or team could supply. And yet, as an archive, PDS must have detailed documentation for the metadata in the labels it supports, or the institutional knowledge encoded into those attributes will be lost - putting the data at risk.The PDS4 metadata solution is based on a three-step approach. First, it is built on two key ISO standards: ISO 11179 "Information Technology - Metadata Registries", which provides a common framework and vocabulary for defining metadata attributes; and ISO 14721 "Space Data and Information Transfer Systems - Open Archival Information System (OAIS) Reference Model", which provides the framework for the information architecture that enforces the object-oriented paradigm for metadata modeling. Second, PDS has defined a hierarchical system that allows it to divide its metadata universe into namespaces ("data dictionaries", conceptually), and more importantly to delegate stewardship for a single namespace to a local authority. This means that a mission can develop its own data model with a high degree of autonomy and effectively extend the PDS model to accommodate its own metadata needs within the common ISO 11179 framework. Finally, within a single namespace - even the core PDS namespace - existing metadata structures can be extended and new structures added to the model as new needs are identifiedThis poster illustrates the PDS4 approach to metadata management and highlights the expected return on the development investment for PDS, users and data

  15. Energy use pattern analyses of greenhouse vegetable production

    Energy Technology Data Exchange (ETDEWEB)

    Canakci, M.; Akinci, I. [Department of Agricultural Machinery, Faculty of Agriculture, Akdeniz University, 07070 Antalya (Turkey)

    2006-07-15

    Greenhouse farming is a growing industry in many states. It is a very expensive way to produce greenhouse crops and there are many variables to consider before the farmer decides to take this route. A good location is essential for crop planning and growing. However, current studies related to energy use patterns and resources present in vegetable production are very limited. This research attempts to investigate the energy use patterns in greenhouse vegetable production, to determine the energy output-input ratio and their relationships. Antalya province, which has greenhouse area of about 13,337ha (30.2%), is the center of greenhouse farming in Turkey. A questionnaire was distributed to 101 greenhouse farms from 11 villages in order to obtain the available data for vegetable production. Power requirement of the machines used in greenhouse operations were measured by using a computer based data acquisition system. Energy and economical variables (i.e. output-input ratio, specific energy, production cost, net return, etc.) were calculated by using the standard equations. As a result, the operational energy and energy source requirements of the greenhouse vegetable production were found between the ranges of 23,883.5-28,034.7 and 45,763.3-49,978.8MJ/1000m{sup 2}, respectively. The energy ratio of four major greenhouse vegetables-tomato, pepper, cucumber and eggplant-was 0.32, 0.19, 0.31, 0.23, respectively. The crop yields increased as a function of the total energy inputs with the best form being second-degree polynomial. The net return of the vegetable production was found in the 595.6-2775.3$/1000m{sup 2} ranges. Among the greenhouse vegetables, tomato cultivation resulted in being the most profitable. (author)

  16. Vegetable Grafting: The Implications of a Growing Agronomic Imperative for Vegetable Fruit Quality and Nutritive Value

    Directory of Open Access Journals (Sweden)

    Marios C. Kyriacou

    2017-05-01

    Full Text Available Grafting has become an imperative for intensive vegetable production since chlorofluorocarbon-based soil fumigants were banned from use on grounds of environmental protection. Compelled by this development, research into rootstock–scion interaction has broadened the potential applications of grafting in the vegetable industry beyond aspects of soil phytopathology. Grafting has been increasingly tapped for cultivation under adverse environs posing abiotic and biotic stresses to vegetable crops, thus enabling expansion of commercial production onto otherwise under-exploited land. Vigorous rootstocks have been employed not only in the open field but also under protected cultivation where increase in productivity improves distribution of infrastructural and energy costs. Applications of grafting have expanded mainly in two families: the Cucurbitaceae and the Solanaceae, both of which comprise major vegetable crops. As the main drives behind the expansion of vegetable grafting have been the resistance to soilborne pathogens, tolerance to abiotic stresses and increase in yields, rootstock selection and breeding have accordingly conformed to the prevailing demand for improving productivity, arguably at the expense of fruit quality. It is, however, compelling to assess the qualitative implications of this growing agronomic practice for human nutrition. Problems of impaired vegetable fruit quality have not infrequently been associated with the practice of grafting. Accordingly, the aim of the current review is to reassess how the practice of grafting and the prevalence of particular types of commercial rootstocks influence vegetable fruit quality and, partly, storability. Physical, sensorial and bioactive aspects of quality are examined with respect to grafting for watermelon, melon, cucumber, tomato, eggplant, and pepper. The physiological mechanisms at play which mediate rootstock effects on scion performance are discussed in interpreting the

  17. Induction of mutations in tomato variety Solar Set

    International Nuclear Information System (INIS)

    Peiris, R.

    1995-01-01

    The production of tomatoes in Sri Lanka is hampered by many problems. Tomato is an economic crop which is nutritious and has export potential. The major constraint for tomato production is Bacterial Wilt caused by Pseudomonas Solanacearum. A study was initiated with the obnjective of finding tomato genotype having resistance to bacterial wilt. The seeds of the varity, Solar Set which is highly susceptible to bacterial wilt was exposed to irradiation from Co 60 source after adjusting moisture content to 14%. The dosese given were 0, 25, 30, 35, 40, 45, 50 krad. The seeds were sown in plastic trays and germination count was taken after 3 days. The LD50 value for the induction of mutants in tomato variety Solar Set is observed to be 35.6 Kr and it is the best dose value for the induction of beneficial mutants in tomato variety, Solar Set by irradiation

  18. Preparation of function-enhanced vegetable oils

    Directory of Open Access Journals (Sweden)

    Hiroshi Maeda

    2016-01-01

    Full Text Available Background: Previously, we (HM found that most commercially available edible oils, which were processed by hexane extraction followed by a number of purification steps, were extremely low in anti-peroxy radical (ROO., or radical scavenging activity. This is a great contrast to the respective virgin oils as exemplified by extra-virgin olive oil or crude rape seed oil [1-4] (Figure 1. Therefore, such highly purified oils will became prooxidant and less desirable food components in terms of health oriented diet. Oxidized oils may eventually cause DNA cleavages, modification of proteins, RNA, and lipids, as well as cellular damage, or promote inflammation and carcinogenesis at later time [5-9]. These commercial oils of low antioxidant activity may be improved by adding functionally effective antioxidative components, by using dried vegetable-waste such as tomato-juice-waste-residues and wine-ferment-waste-residues. Their antioxiative components will be transferred into the functionally poor grade edible oils, and consequently, one can improve the quality of such functionally poor oils and thereby contributing human health [2,8,9]. The purpose of this paper is to report a practical procedure to fortify functionally low grade conventional edible oils to functionally enriched edible oils using dried vegetable-waste residues such as tomato juice waste, and wine-ferment-residues, or other vegetable-waste residues. Methods: (1 Preparation and measurements of lycopene and carotenoid enriched oils. To 5.0g or 1.0g of the dried residue of tomato juice waste, 100ml of commercial rape seed (canola oil was added respectively. Each mixture was incubated at room temperature in dark for several weeks. Amount of lycopene and carotenoids extracted into the oil was monitored by increase of absorption (400-550nm and fluorescence at 470nm of carotenoid. Grape-juice ferment (wine waste was similarly prepared after hot air drying, and immersed in canola oil. (2

  19. Screening of tomato varieties for fruit tree based Agroforestry system

    Directory of Open Access Journals (Sweden)

    J. Hossain

    2014-12-01

    Full Text Available An experiment was conducted with four tomato varieties under a six year old orchard was accomplished at the Bangabandhu Sheikh Mujibur Rahman Agricultural University (BSMRAU research farm during October 2011 to April 2012. The experiment was laid out in a Randomized Complete Block Design with three replications. Four tomato varieties (BARI Tomato 2, BARI Tomato 8, BARI Tomato 14 and BARI Tomato 15 were grown under guava, mango, olive and control. Results showed that light availability in control plot (999.75 μ mol m-2s-1 was remarkably higher over fruit tree based agroforestry systems and it was 58.8, 43.9 and 31.5% of the control for guava, mango and olive based systems, respectively. The shortest tomato plant was observed in olive based system (54.91 cm, while the tallest plant was observed in mango based system (60.09 cm. The highest SPAD value and number of primary branches per plant was recorded in control plot. Fruit length, fruit girth was found lowest in olive based system. The highest yield (34.06 t ha-1 was recorded in control plot while the lowest yield (10.26 t ha-1 was recorded in olive based system. The economic performance of fruit tree based tomato production system showed that both the net return and BCR of mango and guava based system was higher over control and olive based system. The contents of organic carbon, nitrogen, available phosphorus, potassium and sulfur of before experimentation soil were slightly higher in fruit tree based agroforestry systems than the control. After experimentation, nutrient elements in soil were found increased slightly than initial soils. Fruit tree based agroforestry systems could be ranked based on the economic performance as mango> guava> control> olive based system with BARI Tomato 15, BARI Tomato 2, BARI Tomato 14 and BARI Tomato 8, respectively.

  20. LICOPENE AND Β-CAROTENE IN TOMATO

    Directory of Open Access Journals (Sweden)

    I. Yu. Kondratieva

    2016-01-01

    Full Text Available The high antioxidant activity in tomato fruits is caused not only by sufficient content of vitamin C and polyphenols but also the carotenoids and the fat soluble antioxidants. Lycopene and beta-carotene are the main fat-soluble antioxidants, the consumption of which influences positively on human’s health. It is known that tomato fruits are the source of lycopene for human diet, providing up to 85% of the total lycopene in food. The breeding program for tomato cultivars with high content of carotenoids is a very important task for breeders. In our study the content of betacarotene and lycopene was assessed in 18 tomato accessions with red, pink, yellow and orange fruits obtained in Solanaceae Breeding Laboratory at VNIISSOK. All plants were grown in experimental open field in Odintsovo region, Moscow oblast, VNIISSOK. It was revealed that the typical concentration ratio of lycopene to beta-carotene for pink and red fruits was 1.5 to 10.25, but for yellow and orange fruits was 0 to 0.63. Highest ratio was observed in red fruits in line 230-16. The highest lycopene content was found in red fruits of tree type tomato lines 198-16 and 86F1 (11.5 and 8.7 g/100g. respectively. The highest content of betacarotene was in yellow fruits of line 53-16 F1 (4.1 mg/100g and orange fruits of line 184-16 (6.2 mg/100g. All studied accessions with orange fruits had the higher content of beta-carotene than in standard and highest content of lycopene in this group of accessions. Thus, these fruits had the high nutritional value. The balanced content of lycopene and beta-carotene and low acidity in pink and yellow-orange tomato fruits makes these cultivars the most valuable for children’s diet and people with problems of digestive system.

  1. Analysis of Clonostachys rosea-induced resistance to tomato gray mold disease in tomato leaves.

    Directory of Open Access Journals (Sweden)

    Liana Dalcantara Ongouya Mouekouba

    Full Text Available Tomato gray mold disease, caused by Botrytis cinerea, is a serious disease in tomato. Clonostachys rosea is an antagonistic microorganism to B. cinerea. To investigate the induced resistance mechanism of C. rosea, we examined the effects of these microorganisms on tomato leaves, along with changes in the activities of three defense enzymes (PAL, PPO, GST, second messengers (NO, H2O2, O2(- and phytohormones (IAA, ABA, GA3, ZT, MeJA, SA and C2H4. Compared to the control, all treatments induced higher levels of PAL, PPO and GST activity in tomato leaves and increased NO, SA and GA3 levels. The expression of WRKY and MAPK, two important transcription factors in plant disease resistance, was upregulated in C. rosea- and C. rosea plus B. cinerea-treated samples. Two-dimensional gel electrophoresis analysis showed that two abundant proteins were present in the C. rosea plus B. cinerea-treated samples but not in the other samples. These proteins were determined (by mass spectrum analysis to be LEXYL2 (β-xylosidase and ATP synthase CF1 alpha subunit. Therefore, C. rosea plus B. cinerea treatment induces gray mold resistance in tomato. This study provides a basis for elucidating the mechanism of C. rosea as a biocontrol agent.

  2. Screening of tomato genotypes for resistance to tomato fruit borer (helicoverpa armiger hubner) in Pakistan

    International Nuclear Information System (INIS)

    Sajjad, M.; Ashfaq, M.; Suhail, A.

    2011-01-01

    Tomato genotypes viz., Roma Local, Rio Grande, Tanja, Chico III, Long Tipped, Red-Top, FS-8001, FS-8002, Tropic, Pakit, Peelo, NARC-1, Roma VFN, Pant Bahr, Ebein, Nova Mech, Rockingham, Nagina, Shalkot-96, Pomodoro, Manik, Gressilesse, Nadir, Early Mech, Tommy, Pusha Rubi, Tropic boy, Big Long, Sahil, Sun 6002, Money-Maker and Royesta were evaluated to screen out the suitable resistant/susceptible genotypes against the fruit borer in Pakistan. The results imparted that the percentage of fruit infestation and larval population per plant on tested genotypes of tomato varied significantly. Roma VF, NARC-1 and FS-8002 were categorized as susceptible genotypes with fruit infestation (37.69%, 37.08% and 36.41%, respectively) and larval population per plant (1.02%, 1.02% and 0.84 %, respectively). Whereas, the genotypes Sahil, Pakit and Nova Mecb had fruit infestation (12.30%, 13.14% and 13.96%, respectively) and larval population per plant (0.42%, 0.42% and 0.43%, respectively) and declared as resistant genotypes to tomato fruit borer. Lower values of host plant susceptibility indices (HPSI) were recorded on resistant genotypes. Sahil, Pakit and Nova Mecb could be used as a source of resistance for developing tomato genotypes resistant to tomato fruit borer. (author)

  3. ARIADNE: a tracking system for relationships in LHCb metadata

    International Nuclear Information System (INIS)

    Shapoval, I; Clemencic, M; Cattaneo, M

    2014-01-01

    The data processing model of the LHCb experiment implies handling of an evolving set of heterogeneous metadata entities and relationships between them. The entities range from software and databases states to architecture specificators and software/data deployment locations. For instance, there is an important relationship between the LHCb Conditions Database (CondDB), which provides versioned, time dependent geometry and conditions data, and the LHCb software, which is the data processing applications (used for simulation, high level triggering, reconstruction and analysis of physics data). The evolution of CondDB and of the LHCb applications is a weakly-homomorphic process. It means that relationships between a CondDB state and LHCb application state may not be preserved across different database and application generations. These issues may lead to various kinds of problems in the LHCb production, varying from unexpected application crashes to incorrect data processing results. In this paper we present Ariadne – a generic metadata relationships tracking system based on the novel NoSQL Neo4j graph database. Its aim is to track and analyze many thousands of evolving relationships for cases such as the one described above, and several others, which would otherwise remain unmanaged and potentially harmful. The highlights of the paper include the system's implementation and management details, infrastructure needed for running it, security issues, first experience of usage in the LHCb production and potential of the system to be applied to a wider set of LHCb tasks.

  4. ARIADNE: a Tracking System for Relationships in LHCb Metadata

    Science.gov (United States)

    Shapoval, I.; Clemencic, M.; Cattaneo, M.

    2014-06-01

    The data processing model of the LHCb experiment implies handling of an evolving set of heterogeneous metadata entities and relationships between them. The entities range from software and databases states to architecture specificators and software/data deployment locations. For instance, there is an important relationship between the LHCb Conditions Database (CondDB), which provides versioned, time dependent geometry and conditions data, and the LHCb software, which is the data processing applications (used for simulation, high level triggering, reconstruction and analysis of physics data). The evolution of CondDB and of the LHCb applications is a weakly-homomorphic process. It means that relationships between a CondDB state and LHCb application state may not be preserved across different database and application generations. These issues may lead to various kinds of problems in the LHCb production, varying from unexpected application crashes to incorrect data processing results. In this paper we present Ariadne - a generic metadata relationships tracking system based on the novel NoSQL Neo4j graph database. Its aim is to track and analyze many thousands of evolving relationships for cases such as the one described above, and several others, which would otherwise remain unmanaged and potentially harmful. The highlights of the paper include the system's implementation and management details, infrastructure needed for running it, security issues, first experience of usage in the LHCb production and potential of the system to be applied to a wider set of LHCb tasks.

  5. Event metadata records as a testbed for scalable data mining

    International Nuclear Information System (INIS)

    Gemmeren, P van; Malon, D

    2010-01-01

    At a data rate of 200 hertz, event metadata records ('TAGs,' in ATLAS parlance) provide fertile grounds for development and evaluation of tools for scalable data mining. It is easy, of course, to apply HEP-specific selection or classification rules to event records and to label such an exercise 'data mining,' but our interest is different. Advanced statistical methods and tools such as classification, association rule mining, and cluster analysis are common outside the high energy physics community. These tools can prove useful, not for discovery physics, but for learning about our data, our detector, and our software. A fixed and relatively simple schema makes TAG export to other storage technologies such as HDF5 straightforward. This simplifies the task of exploiting very-large-scale parallel platforms such as Argonne National Laboratory's BlueGene/P, currently the largest supercomputer in the world for open science, in the development of scalable tools for data mining. Using a domain-neutral scientific data format may also enable us to take advantage of existing data mining components from other communities. There is, further, a substantial literature on the topic of one-pass algorithms and stream mining techniques, and such tools may be inserted naturally at various points in the event data processing and distribution chain. This paper describes early experience with event metadata records from ATLAS simulation and commissioning as a testbed for scalable data mining tool development and evaluation.

  6. DataNet: A flexible metadata overlay over file resources

    CERN Multimedia

    CERN. Geneva

    2014-01-01

    Managing and sharing data stored in files results in a challenge due to data amounts produced by various scientific experiments [1]. While solutions such as Globus Online [2] focus on file transfer and synchronization, in this work we propose an additional layer of metadata over file resources which helps to categorize and structure the data, as well as to make it efficient in integration with web-based research gateways. A basic concept of the proposed solution [3] is a data model consisting of entities built from primitive types such as numbers, texts and also from files and relationships among different entities. This allows for building complex data structure definitions and mix metadata and file data into a single model tailored for a given scientific field. A data model becomes actionable after being deployed as a data repository which is done automatically by the proposed framework by using one of the available PaaS (platform-as-a-service) platforms and is exposed to the world as a REST service, which...

  7. Metadata In, Library Out. A Simple, Robust Digital Library System

    Directory of Open Access Journals (Sweden)

    Tonio Loewald

    2010-06-01

    Full Text Available Tired of being held hostage to expensive systems that did not meet our needs, the University of Alabama Libraries developed an XML schema-agnostic, light-weight digital library delivery system based on the principles of "Keep It Simple, Stupid!" Metadata and derivatives reside in openly accessible web directories, which support the development of web agents and new usability software, as well as modification and complete retrieval at any time. The file name structure is echoed in the file system structure, enabling the delivery software to make inferences about relationships, sequencing, and complex object structure without having to encapsulate files in complex metadata schemas. The web delivery system, Acumen, is built of PHP, JSON, JavaScript and HTML5, using MySQL to support fielded searching. Recognizing that spreadsheets are more user-friendly than XML, an accompanying widget, Archivists Utility, transforms spreadsheets into MODS based on rules selected by the user. Acumen, Archivists Utility, and all supporting software scripts will be made available as open source.

  8. Search for microorganisms which can disrupt communication between plant pathogenic bacteria causing hairy roots disease in greenhouse vegetables

    NARCIS (Netherlands)

    Streminska, M.A.; Stijger, I.

    2016-01-01

    Hairy roots disease is an important problem in cultivation of greenhouse vegetables (tomato, aubergine and cucumber). Infection is caused by rhizogenic bacteria from Agrobacterium/Rhizobium group. It has been shown that infection process is regulated by environmental factors and quorum sensing

  9. Co-silencing of tomato S-adenosylhomocysteine hydrolase genes confers increased immunity against Pseudomonas syringae pv. tomato DC3000 and enhanced tolerance to drought stress

    Directory of Open Access Journals (Sweden)

    Li Xiao Hui

    2015-09-01

    Full Text Available S-adenosylhomocysteine hydrolase (SAHH, catalyzing the reversible hydrolysis of S-adenosylhomocysteine to adenosine and homocysteine, is a key enzyme that maintain the cellular methylation potential in all organisms. We report here the biological functions of tomato SlSAHHs in stress response. The tomato genome contains three SlSAHH genes that encode SlSAHH proteins with high level of sequence identity. qRT-PCR analysis revealed that SlSAHHs responded with distinct expression induction patterns to Pseudomonas syringae pv. tomato (Pst DC3000 and Botrytis cinerea as well as to defense signaling hormones such as salicylic acid, jasmonic acid and a precursor of ethylene. Virus-induced gene silencing-based knockdown of individual SlSAHH gene did not affect the growth performance and the response to Pst DC3000. However, co-silencing of three SlSAHH genes using a conserved sequence led to significant inhibition of vegetable growth. The SlSAHH-co-silenced plants displayed increased resistance to Pst DC3000 but did not alter the resistance to B. cinerea. Co-silencing of SlSAHHs resulted in constitutively activated defense responses including elevated SA level, upregulated expression of defense-related and PAMP-triggered immunity marker genes and increased callose deposition and H2O2 accumulation. Furthermore, the SlSAHH-co-silenced plants also exhibited enhanced drought stress tolerance although they had relatively small roots. These data demonstrate that, in addition to the functions in growth and development, SAHHs also play important roles in regulating biotic and abiotic stress responses in plants.

  10. Effects of elevated CO2 concentration on growth and water usage of tomato seedlings under different ammonium/nitrate ratios

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Increasing atmospheric CO2 concentration is generally expected to enhance photosynthesis and growth of agricultural C3 vegetable crops,and therefore results in an increase in crop yield.However,little is known about the combined effect of elevated CO2 and N species on plant growth and development.Two growth-chamber experiments were conducted to determine the effects of NH4+/NO3- ratio and elevated CO2 concentration on the physiological development and water use of tomato seedlings.Tomato was grown for 45 d in containers with nutrient solutions varying in NH4+/NO3- ratios and CO2 concentrations in growth chambers.Results showed that plant height,stem thickness,total dry weight,dry weight of the leaves,stems and roots,G value (total plant dry weight/seedling days),chlorophyll content,photosynthetic rate,leaf-level and whole plant-level water use efficiency and cumulative water consumption of tomato seedlings were increased with increasing proportion of NO3- in nutrient solutions in the elevated CO2 treatment.Plant biomass,plant height,stem thickness and photosynthetic rate were 67%,22%,24% and 55% higher at elevated CO2 concentration than at ambient CO2 concentration,depending on the values of NH4+/NO3- ratio.These results indicated that elevating CO2 concentration did not mitigate the adverse effects of 100% NH4+-N (in nutrient solution) on the tomato seedlings.At both CO2 levels,NH4+/NO3- ratios of nutrient solutions strongly influenced almost every measure of plant performance,and nitrate-fed plants attained a greater biomass production,as compared to ammonium-fed plants.These phenomena seem to be related to the coordinated regulation of photosynthetic rate and cumulative water consumption of tomato seedlings.

  11. Inconsistencies between Academic E-Book Platforms: A Comparison of Metadata and Search Results

    Science.gov (United States)

    Wiersma, Gabrielle; Tovstiadi, Esta

    2017-01-01

    This article presents the results of a study of academic e-books that compared the metadata and search results from major academic e-book platforms. The authors collected data and performed a series of test searches designed to produce the same result regardless of platform. Testing, however, revealed metadata-related errors and significant…

  12. Document Classification in Support of Automated Metadata Extraction Form Heterogeneous Collections

    Science.gov (United States)

    Flynn, Paul K.

    2014-01-01

    A number of federal agencies, universities, laboratories, and companies are placing their documents online and making them searchable via metadata fields such as author, title, and publishing organization. To enable this, every document in the collection must be catalogued using the metadata fields. Though time consuming, the task of identifying…

  13. iLOG: A Framework for Automatic Annotation of Learning Objects with Empirical Usage Metadata

    Science.gov (United States)

    Miller, L. D.; Soh, Leen-Kiat; Samal, Ashok; Nugent, Gwen

    2012-01-01

    Learning objects (LOs) are digital or non-digital entities used for learning, education or training commonly stored in repositories searchable by their associated metadata. Unfortunately, based on the current standards, such metadata is often missing or incorrectly entered making search difficult or impossible. In this paper, we investigate…

  14. An Assistant for Loading Learning Object Metadata: An Ontology Based Approach

    Science.gov (United States)

    Casali, Ana; Deco, Claudia; Romano, Agustín; Tomé, Guillermo

    2013-01-01

    In the last years, the development of different Repositories of Learning Objects has been increased. Users can retrieve these resources for reuse and personalization through searches in web repositories. The importance of high quality metadata is key for a successful retrieval. Learning Objects are described with metadata usually in the standard…

  15. Effect of Salicylic Acid on Prevention of Chilling Injury of Cherry Tomato (Lycopersicun esculentum cv. Messina(

    Directory of Open Access Journals (Sweden)

    hanifeh seyed hajizadeh

    2018-02-01

    Full Text Available Introduction: Fruits and vegetables play a major role in providing vitamins and minerals that are essential in the metabolism. In addition to providing vitamins and minerals compounds, they are called secondary metabolites. Tomatoes are one of the most vegetables in diets of people around the world. Low temperature stress associated with the production of reactive oxygen species causing damage can occur before or after harvest, farm, transportation, storage and marketing. Today, a greater emphasis is placed on post-harvest storage of agricultural products to increase productivity and make better use of labor resources, worker, energy and money, rather than an increase in production. One of the most promising treatments is the use of salicylic acid for prevention of the frost damage of post-harvest fruits and vegetables with different mechanisms such as increased enzymatic and non-enzymatic antioxidant system activity. Salicylic acid is known as a signal molecule in the induction defense mechanisms in plants. SA is a well-known phenol that can prevent ACO activity that is the direct precursor of ethylene and decreases Reactive Oxygen Species (ROS with increasing enzyme antioxidant activity. Salicylic acid is a natural phenolic compound known as a plant hormone having positive effect on storage life and quality of fruits. This study aimed to investigate the effects of pre- and post-harvest application of salicylic acid on antioxidant properties and quality of tomato and its effect was evaluated on prevention of chilling injury of cherry tomatoes during cold storage. Material and Methods: This research was conducted in a greenhouse of Horticulture Department of University of Maragheh. Treatments were included before harvest at fruit set stage with the control (distilled water and 0.75 mM salicylic acid spraying and after harvest, red ripened fruits were used for treatments control and immersion in 0.75 mM salicylic acid. Then all the treated fruits

  16. The Impact of the Agricultural Trade Liberalization on the Elements of the Marketing Mix of Fruit and Vegetables in BIH

    OpenAIRE

    Dončić, Dalibor; Nastić, Rade

    2013-01-01

    In this paper, we analyzed in detail elements of the marketing mix of fruit and vegetables, therefore this product, price, distribution, promotion and people in Bosnia and Herzegovina, after seven years of liberal market within CEFTA. Each element of the marketing mix is analyzed for the most important vegetable species (cabbage, onions, peppers, tomatoes) and fruit species (apple, pear, plum). The analyzed elements of the marketing mix are compared with the characteristics of the elements of...

  17. Preliminary design, construction and evaluation of robot of tomato seed planting for the trays of greenhouse

    Directory of Open Access Journals (Sweden)

    J Ghezavati

    2015-09-01

    Full Text Available Introduction: From an economic viewpoint, tomato is considered as the second most valuable crop after potato. It is also preceded by the potato in terms of per capita consumption in the world. In 2008, the cultivation area used for the tomato as equal to 163,539 hectares in Iran and the production of it was equal to 5,887,715 tons with an average production of 117,887 tons in 4352 hectares in the provinces, respectively. Having high production volume and quality, costly hybrid seeds are currently used for the major planting areas of vegetable in Iran. Most of the used transplanted seedlings are 83%. Since the seeds are expensive, the percentage of seedlings and healthy and disease-free seeds should be used for maximized germination and be transferred to the fields of open space. Preparing seedlings in transplanting trays is a technology to respond to this need. Trays are covered with a layer of Peat and Miculite fertilizers. Then, one seed is manually placed in each cell after gauging and preparing a suitable field. However, manually placing seeds is time-consuming and requires hard labor. Sixteen working labors per hour are required for 15 × 7 cell in order to have 10200 seedlings grown in 100 trays. Due to lack of adequate labor, production capacity of greenhouses is reduced, especially in the farming season when finding labor for planting vegetable sprouts is laborious. Therefore, mechanizing tray seeding operations is essential to increase the capacity of the growing industry of greenhouses in Iran. Materials and Methods: Initially, the tomato seeds were examined in the laboratory. The most important parameters of the study included size, shape, weight, the speed of getting out of the tank and the minimum carrying speed. Then, a vacuum-based single seed picking unit was prepared to investigate the factors influencing the design, so that a single tomato seed can be harvested from the masses. The most important factors considered in the

  18. Effects of pre-sowing gamma irradiation of tomato seeds on production and yield of open field tomato crops

    Energy Technology Data Exchange (ETDEWEB)

    Zhamyansurehn, D [Institut Fiziki i Matematiki Akademii Nauk Mongol' skoj Narodnoj Respubliki, Ulan Bator; Voloozh, D

    1976-01-01

    The following conclusions may be drawn from results obtained in experiments with pre-sowing irradiation of tomato seeds and its effect on tomato crops. The dose of 2500 R proved to be optimum for increase of tomato crops yield. The yield increase resulted from increase in average weight, quantity and the dry matter of the fruit. The irradiation did not significantly affect the concentration of sugar, phosphorus, nitrogen and ascorbic acid in the fruit.

  19. Effects of pre-sowing gamma irradiation of tomato seeds on production and yield of open field tomato crops

    International Nuclear Information System (INIS)

    Zhamyansurehn, D.; Voloozh, D.

    1976-01-01

    The following conclusions may be drawn from results obtained in experiments with pre-sowing irradiation of tomato seeds and its effect on tomato crops. The dose of 2500 R proved to be optimum for increase of tomato crops yield. The yield increase resulted from increase in average weight, quantity and the dry matter of the fruit. The irradiation did not significantly affect the concentration of sugar, phosphorus, nitrogen and ascorbic acid in the fruit. (author)

  20. First report of bacterial speck of tomato caused by Pseudomonas syringae pv. tomato race 1 in Portugal

    OpenAIRE

    Cruz, L.; Cruz, J.; Eloy, M.; Oliveira, Helena; Vaz, H.; Tenreiro, R.

    2010-01-01

    Protected and open field tomato crops are economically important for Portuguese agriculture. In 1983, Pseudomonas syringae pv. tomato (Okabe, 1933) Young, Dye & Wilkie, 1978 was first reported affecting protected crops (3) and then later under open field conditions (1). In the 2009 spring/summer season, several outbreaks of bacterial speck of tomato showing an unusual degree of severity were observed in open fields from the Tagus Valley Region