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Sample records for vascular plants bryophytes

  1. How do bryophytes govern generative recruitment of vascular plants?

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    Soudzilovskaia, N.A.; Graae, B.J.; Douma, J.C.; Grau, O.; Milbau, A.; Shevtsova, A.; Wolters, L.; Cornelissen, J.H.C.

    2011-01-01

    Interactions between vascular plants and bryophytes determine plant community composition in many ecosystems. Yet, little is known about the importance of interspecific differences between bryophytes with respect to their effects on vascular plants. We compared the extent to which species-specific

  2. Shifts in bryophyte carbon isotope ratio across an elevation × soil age matrix on Mauna Loa, Hawaii: do bryophytes behave like vascular plants?

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    Waite, Mashuri; Sack, Lawren

    2011-05-01

    The carbon isotope ratio (δ(13)C) of vascular plant leaf tissue is determined by isotope discrimination, primarily mediated by stomatal and mesophyll diffusion resistances and by photosynthetic rate. These effects lead to predictable trends in leaf δ(13)C across natural gradients of elevation, irradiance and nutrient supply. Less is known about shifts in δ(13)C for bryophytes at landscape scale, as bryophytes lack stomata in the dominant gametophyte phase, and thus lack active control over CO(2) diffusion. Twelve bryophyte species were sampled across a matrix of elevation and soil ages on Mauna Loa, Hawaii Island. We tested hypotheses based on previous findings for vascular plants, which tend to have less negative δ(13)C at higher elevations or irradiances, and for leaves with higher leaf mass per area (LMA). Across the matrix, bryophytes spanned the range of δ(13)C values typical of C(3) vascular plants. Bryophytes were remarkably similar to vascular plants in exhibiting less negative δ(13)C with increasing elevation, and with lower overstory cover; additionally δ(13)C was related to bryophyte canopy projected mass per area, a trait analogous to LMA in vascular plants, also correlated negatively with overstory cover. The similarity of responses of δ(13)C in bryophytes and vascular plants to environmental factors, despite differing morphologies and diffusion pathways, points to a strong direct role of photosynthetic rate in determining δ(13)C variation at the landscape scale.

  3. Species richness of vascular plants, bryophytes, and lichens along an altitudinal gradient in western Norway

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    Grytnes, John Arvid; Heegaard, Einar; Ihlen, Per G.

    2006-05-01

    Species richness patterns of ground-dwelling vascular plants, bryophytes, and lichens were compared along an altitudinal gradient (310-1135 m a.s.l.), in western Norway. Total species richness peaked at intermediate altitudes, vascular plant species richness peaked immediately above the forest limit (at 600-700 m a.s.l.), bryophyte species richness had no statistically significant trend, whereas lichen richness increased from the lowest point and up to the forest limit, with no trend above. It is proposed that the pattern in vascular plant species richness is enhanced by an ecotone effect. Bryophyte species richness responds to local scale factors whereas the lichen species richness may be responding to the shading from the forest trees.

  4. Does cross-taxon analysis show similarity in diversity patterns between vascular plants and bryophytes? Some answers from a literature review.

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    Bagella, Simonetta

    2014-04-01

    The objective of this study was to clarify the taxon surrogacy hypothesis relative to vascular plants and bryophytes. A literature review was conducted to obtain papers that met the following criteria: (i) they examined species richness values; or (ii) they evaluated the species richness within the same study sites, or under the same spatial variation conditions. Twenty-seven papers were accessed. The richness of the two taxa, compared in 32 cases, positively co-varied in about half of the comparisons. The response to the spatial variation in environmental or human-induced factors of the two taxa in terms of species richness was rather variable. Based on current knowledge, the main documented findings regard forest habitats and nival gradients. In forest habitats, co-variation in species richness is likely when similar environments are analysed and seems to be strengthened for boreal forests. Along the nival gradient, a different response in terms of richness of the two taxa suggests that vascular plants cannot be considered good surrogates for bryophytes. Copyright © 2014 Académie des sciences. Published by Elsevier SAS. All rights reserved.

  5. Contrasting species-environment relationships in communities of testate amoebae, bryophytes and vascular plants along the fen-bog gradient.

    Science.gov (United States)

    Lamentowicz, Mariusz; Lamentowicz, Lukasz; van der Knaap, Willem O; Gabka, Maciej; Mitchell, Edward A D

    2010-04-01

    We studied the vegetation, testate amoebae and abiotic variables (depth of the water table, pH, electrical conductivity, Ca and Mg concentrations of water extracted from mosses) along the bog to extremely rich fen gradient in sub-alpine peatlands of the Upper Engadine (Swiss Alps). Testate amoeba diversity was correlated to that of mosses but not of vascular plants. Diversity peaked in rich fen for testate amoebae and in extremely rich fen for mosses, while for testate amoebae and mosses it was lowest in bog but for vascular plants in extremely rich fen. Multiple factor and redundancy analyses (RDA) revealed a stronger correlation of testate amoebae than of vegetation to water table and hydrochemical variables and relatively strong correlation between testate amoeba and moss community data. In RDA, hydrochemical variables explained a higher proportion of the testate amoeba and moss data than water table depth. Abiotic variables explained a higher percentage of the species data for testate amoebae (30.3% or 19.5% for binary data) than for mosses (13.4%) and vascular plants (10%). These results show that (1) vascular plant, moss and testate amoeba communities respond differently to ecological gradients in peatlands and (2) testate amoebae are more strongly related than vascular plants to the abiotic factors at the mire surface. These differences are related to vertical trophic gradients and associated niche differentiation.

  6. Composition and distribution patterns of bryophytes at a reclaimed surface mine in Grundy County, Illinois, with a list of vascular plants

    Energy Technology Data Exchange (ETDEWEB)

    Rastorfer, J.R.

    1981-12-01

    Bryological surveys and collections were made in order to assess the natural colonization of mosses (and liverworts) on acid minesoils of a reclamation demonstration site located adjacent to Goose Lake Prairie State Park in northeastern Illinois. Four types of fine-textured mineral soils were recognized within the site; these were designated as abandoned (cultivated) field soil, oil minesoil (spoil), reclaimed minesoil 1972 to 1973, and reclaimed minesoil 1975 to 1976. The two reclaimed minesoils were distinguished by reclamation efforts begun in 1972 and 1975. Thirty moss taxa and one liverwort species were found on the site, and two additional moss species were found in areas adjacent to the site. Of the 33 bryophyte taxa recognized, 14 species of mosses were new reports for Grundy County. Comparative distribution patterns indicate that the major pioneer species of mosses on reclaimed minesoil were Barbula unguiculata, Ceratodon purpureus, Ditrichum pallidum, and Funaria hygrometrica. On the other hand, Bryum caespiticium and Weissia controversa were considered later seral species rather than primary invaders. Distribution patterns also indicate that mosses were generally unable to colonize unshaded bare reclaimed minesoil. However, moss colonization was successful in those areas where the harsh microhabitat conditions were ameliorated by vascular vegetation. Shoots of both living and dead higher plants most likely affect the proliferation of mosses by shading the soil surface, which results in increased moisture and decreased temperature at the soil surface in contrast to conditions of fully exposed soil.

  7. Contrasts between bryophyte and vascular plant synecological responses in an SO/sub 2/-stressed white spruce association in Central Alberta

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    Winner, W.E.; Bewley, J.D.

    1978-01-01

    Canopy coverage analysis was used to examine the synecological changes exhibited by vascular plants and terrestrial mosses in a white spruce association exposed to SO/sub 2/ fumigation. Both these understory components were found to decline in coverage as SO/sub 2/ stress increased, but mosses were more sensitive to SO/sub 2/ in the more heavily stressed areas. This was observed along both an angle-dependent and a distance-dependent gradient of pollution stress. Diversity steadily declined with increasing SO/sub 2/ stress along the angle-dependent gradient but some localized increases in diversity occurred with increasing stress along the distance-dependent gradient. This was due to invasion of openings resulting from attrition of SO/sub 2/-sensitive species by weedy angiosperms and by vegetative growth of moss species more tolerant of pollution stress. Conclusions have been drawn about the productive strategy of vascular plants and mosses subjected to increasing concentrations of SO/sub 2/. We have elucidated the ecological consequences for community structure of the systematic removal of pollution-sensitive understory species from an otherwise stable vegetation unit.

  8. bryophyte extracts with activity against plant pathogenic fungi

    African Journals Online (AJOL)

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    ABSTRACT: The effects of extracts from 17 different bryophyte species were investigated against economically important plant pathogenic fungi ... remedies of diseases in various forms. Similarly, before the discovery of the synthetic ... and divided into the classes Anthocerotae (horn- worts), Hepaticae (liverworts) and Musci ...

  9. Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants.

    Science.gov (United States)

    Nickrent, D L; Parkinson, C L; Palmer, J D; Duff, R J

    2000-12-01

    A widely held view of land plant relationships places liverworts as the first branch of the land plant tree, whereas some molecular analyses and a cladistic study of morphological characters indicate that hornworts are the earliest land plants. To help resolve this conflict, we used parsimony and likelihood methods to analyze a 6, 095-character data set composed of four genes (chloroplast rbcL and small-subunit rDNA from all three plant genomes) from all major land plant lineages. In all analyses, significant support was obtained for the monophyly of vascular plants, lycophytes, ferns (including PSILOTUM: and EQUISETUM:), seed plants, and angiosperms. Relationships among the three bryophyte lineages were unresolved in parsimony analyses in which all positions were included and weighted equally. However, in parsimony and likelihood analyses in which rbcL third-codon-position transitions were either excluded or downweighted (due to apparent saturation), hornworts were placed as sister to all other land plants, with mosses and liverworts jointly forming the second deepest lineage. Decay analyses and Kishino-Hasegawa tests of the third-position-excluded data set showed significant support for the hornwort-basal topology over several alternative topologies, including the commonly cited liverwort-basal topology. Among the four genes used, mitochondrial small-subunit rDNA showed the lowest homoplasy and alone recovered essentially the same topology as the multigene tree. This molecular phylogeny presents new opportunities to assess paleontological evidence and morphological innovations that occurred during the early evolution of terrestrial plants.

  10. Phytohormone Profiling across the Bryophytes.

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    Lenka Záveská Drábková

    Full Text Available Bryophytes represent a very diverse group of non-vascular plants such as mosses, liverworts and hornworts and the oldest extant lineage of land plants. Determination of endogenous phytohormone profiles in bryophytes can provide substantial information about early land plant evolution. In this study, we screened thirty bryophyte species including six liverworts and twenty-four mosses for their phytohormone profiles in order to relate the hormonome with phylogeny in the plant kingdom.Samples belonging to nine orders (Pelliales, Jungermanniales, Porellales, Sphagnales, Tetraphidales, Polytrichales, Dicranales, Bryales, Hypnales were collected in Central and Northern Bohemia. The phytohormone content was analysed with a high performance liquid chromatography electrospray tandem-mass spectrometry (HPLC-ESI-MS/MS.As revealed for growth hormones, some common traits such as weak conjugation of both cytokinins and auxins, intensive production of cisZ-type cytokinins and strong oxidative degradation of auxins with abundance of a major primary catabolite 2-oxindole-3-acetic acid were pronounced in all bryophytes. Whereas apparent dissimilarities in growth hormones profiles between liverworts and mosses were evident, no obvious trends in stress hormone levels (abscisic acid, jasmonic acid, salicylic acid were found with respect to the phylogeny.The apparent differences in conjugation and/or degradation strategies of growth hormones between liverworts and mosses might potentially show a hidden link between vascular plants and liverworts. On the other hand, the complement of stress hormones in bryophytes probably correlate rather with prevailing environmental conditions and plant survival strategy than with plant evolution.

  11. Terrestrial bryophytes as indicators of fluoride emission from a phosphorus plant, Long Harbour, Newfoundland, Canada

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    Roberts, B.A.; Thompson, L.K.; Sidhu, S.S.

    1979-01-01

    A study of the effects of fluoride emissions (HF, SiF/sub 4/) on certain species of bryophytes was carried out in the vicinity of an industrial palnt producing elemental phosphorus at Long Harbour, Nfld. Damage symptoms varied from mild phyllid chlorosis (yellowing) to severe browning of up to 95% of the phyllids. Polytrichum commune Hedw. was the main bryophyte species used in the survey. Random collections from 45 sample sites were analysed for total fluoride. The fluoride concentrations in phyllid tissue ranged from a high of 6066 ppm (dry weight) at a distance of 1 km northeast of the emission source to 44 ppm (dry weight) 11.7 km northeast of the emission source in the direction of the prevailing wind. Control samples were obtained from similar sites in areas far removed from the industrial plant and contained, on average, 11.3 ppm (dry weight). The concentration of fluoride in the bryophyte phyllid tissue was inversely correlated with distance from the emission source, in the direction of the prevailing wind. The severity of acropetal scorching was found to be correlated with the concentration of fluoride in the bryophyte phyllid tissue, and in addition, samples high in fluoride had fewer sporophytes. Fluoride concentrations in bryophyte tissue are compared with concentrations of fluoride in the needles of balsam fir, Abies Balsamea I., in four damage zones, and also with available and total fluoride in soil humus and concentrations of fluoride in air. The total area affected by fluoride emissions was increased using bryophytes as the pollution indicator species, especially in areas far from the industrial plant.

  12. Vascular flora of the Penobscot Experimental Forest, with provisional lists of lichens and bryophytes

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    Alison C. Dibble

    2014-01-01

    A compilation of plant lists from all available sources since the 1950s represents the flora of the Penobscot Experimental Forest (PEF), Bradley, Maine. More than 300 taxa of vascular plants in 71 families and 186 genera are included. Approximately 85 percent of the taxa are native to Maine. Ten of 45 nonnative species are considered invasive. Infraspecific taxa have...

  13. Characteristics of vascular and bryophyte flora in the landscape reserve «Grofa» (The Ukrainian Carpathians

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    I. S. Pozynych

    2010-09-01

    Full Text Available Information about the landscape reserve of statewide value «Grofa» is presented. The floristic composition of forest and meadow associations of the reserve has been investigated. Typical and rare species for these phytocenoses have been revealed. The rare species and plants from the Red Data Book have been described. As a results of our investigation 117 species (87 Bryophyta and 30 Marshantiophyta have been recorded. Species representation of bryophytes in widespread communities has been described.

  14. Origin and radiation of the earliest vascular land plants.

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    Steemans, Philippe; Hérissé, Alain Le; Melvin, John; Miller, Merrell A; Paris, Florentin; Verniers, Jacques; Wellman, Charles H

    2009-04-17

    Colonization of the land by plants most likely occurred in a stepwise fashion starting in the Mid-Ordovician. The earliest flora of bryophyte-like plants appears to have been cosmopolitan and dominated the planet, relatively unchanged, for some 30 million years. It is represented by fossilized dispersed cryptospores and fragmentary plant remains. In the Early Silurian, cryptospore abundance and diversity diminished abruptly as trilete spores appeared, became abundant, and underwent rapid diversification. This change coincides approximately with the appearance of vascular plant megafossils and probably represents the origin and adaptive radiation of vascular plants. We have obtained a diverse trilete spore occurrence from the Late Ordovician that suggests that vascular plants originated and diversified earlier than previously hypothesized, in Gondwana, before migrating elsewhere and secondarily diversifying.

  15. Plant Vascular Biology 2010

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    Ding, Biao

    2014-11-17

    This grant supported the Second International Conference on Plant Vascular Biology (PVB 2010) held July 24-28, 2010 on the campus of Ohio State University, Columbus, Ohio. Biao Ding (Ohio State University; OSU) and David Hannapel (Iowa State University; ISU) served as co-chairs of this conference. Biao Ding served as the local organizer. PVB is defined broadly here to include studies on the biogenesis, structure and function of transport systems in plants, under conditions of normal plant growth and development as well as of plant interactions with pathogens. The transport systems cover broadly the xylem, phloem, plasmodesmata and vascular cell membranes. The PVB concept has emerged in recent years to emphasize the integrative nature of the transport systems and approaches to investigate them.

  16. Bryophyte communities as biomonitors of environmental factors in the Goujiang karst bauxite, southwestern China.

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    Wang, Shiqiang; Zhang, Zhaohui; Wang, Zhihui

    2015-12-15

    Bauxite mining on karst results in several ecological and environmental issues including heavy metal pollution, soil erosion and the destruction of vegetation. In turn, these may affect the distribution of plant communities and endanger human health. In general, bryophytes (mosses, liverworts and hornworts) are pioneer plants, lacking roots, vascular systems and well-developed cuticles. Due to their high sensitivity to the environment, they are often used to monitor air and soil pollution. A total of 25 bryophyte taxa from 19 genera and 9 families were recorded on Goujiang karst bauxite near the city of Zunyi in the Guizhou Province of southwestern China. Eleven principal bryophyte communities were identified, most of which consisted of only one species (monospecific assemblage), although the proportion of these single-species communities differed at the six locations. The levels of heavy metals also differed in soil from the six locations: iron, 8748.9-10,023μg/g; zinc, 146.7-240.9μg/g; copper, 24.6-60.4μg/g; and nickel, 35.6-95.1μg/g. A canonical correspondence analysis (CCA) of the bryophyte communities and environmental variables revealed the effect of gradient (slope), altitude and heavy metals in the soil on the distribution of the principal bryophyte communities. More than 36% of bryophyte taxa identified reproduced asexually by gemmae, as gemmiferous bryophyte communities tolerate substrates with high levels of heavy metals more readily than non-gemmiferous communities do. The distribution of heavy metals in the soil is reflected in the distribution of the bryophyte communities. The distribution characteristics of the principal bryophyte communities and of the gemmiferous bryophyte communities are useful in monitoring heavy metal pollution in karst bauxite. Copyright © 2015 Elsevier B.V. All rights reserved.

  17. The Rengen Grassland experiment: bryophytes biomass and element concentrations after 65 years of fertilizer application.

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    Hejcman, Michal; Száková, Jirina; Schellberg, Jürgen; Srek, Petr; Tlustos, Pavel; Balík, Jirí

    2010-07-01

    The Rengen Grassland Experiment in Germany, established in 1941, consists of the following fertilizer treatments applied under a two cut management: control, Ca, CaN, CaNP, CaNP-KCl, and CaNP-K(2)SO(4). The aim of this study was (1) to identify effects of fertilizer application on biomass and species composition of bryophytes and (2) to investigate the impact of fertilizer application on macro- (N, P, K, Ca, Mg), micro- (Cu, Fe, Mn, Zn), and toxic (As, Cd, Cr, Pb, Ni) element concentrations in bryophyte biomass. In June 2006, Rhytidiadelphus squarrosus was the only bryophyte species recorded in the control. In treatment Ca, R. squarrosus was the dominant bryophyte species whereas Brachythecium rutabulum occurred sporadically only in a single plot of that treatment. The latter was the only bryophyte species collected in CaN, CaNP, CaNP-KCl, and CaNP-K(2)SO(4) treatments. Dry matter accumulation of bryophytes was highest in the control (180 g m(-2)) followed by Ca (46 g m(-2)), CaNP (25 g m(-2)), CaNP-KCl (15 g m(-2)), CaNP-K(2)SO(4) (9 g m(-2)), and CaN (2 g m(-2)) treatments. A negative correlation between biomass production of bryophytes and dry matter production of vascular plants was revealed up to a threshold value of 400 g m(-2). Above this limit, biomass production of bryophytes remained obviously unaffected by further increase in biomass production of vascular plants. A significant effect of treatment on As, Cd, Cr, Fe, Mn, Ni, Pb, P, Ca, Mg, K, and N concentrations was revealed. Concentrations of these elements were a function of amount of elements supplied with fertilizers. Bryophytes seem to be promising bio-indicators not only for airborne deposition of toxic element but also for fertilizer introduced as well.

  18. The mitochondrial genome of the lycophyte Huperzia squarrosa: the most archaic form in vascular plants.

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    Liu, Yang; Wang, Bin; Cui, Peng; Li, Libo; Xue, Jia-Yu; Yu, Jun; Qiu, Yin-Long

    2012-01-01

    Mitochondrial genomes have maintained some bacterial features despite their residence within eukaryotic cells for approximately two billion years. One of these features is the frequent presence of polycistronic operons. In land plants, however, it has been shown that all sequenced vascular plant chondromes lack large polycistronic operons while bryophyte chondromes have many of them. In this study, we provide the completely sequenced mitochondrial genome of a lycophyte, from Huperzia squarrosa, which is a member of the sister group to all other vascular plants. The genome, at a size of 413,530 base pairs, contains 66 genes and 32 group II introns. In addition, it has 69 pseudogene fragments for 24 of the 40 protein- and rRNA-coding genes. It represents the most archaic form of mitochondrial genomes of all vascular plants. In particular, it has one large conserved gene cluster containing up to 10 ribosomal protein genes, which likely represents a polycistronic operon but has been disrupted and greatly reduced in the chondromes of other vascular plants. It also has the least rearranged gene order in comparison to the chondromes of other vascular plants. The genome is ancestral in vascular plants in several other aspects: the gene content resembling those of charophytes and most bryophytes, all introns being cis-spliced, a low level of RNA editing, and lack of foreign DNA of chloroplast or nuclear origin.

  19. Bryophytes - an emerging source for herbal remedies and chemical production

    DEFF Research Database (Denmark)

    Sabovljevic, Marko S.; Sabovljević, Aneta D.; Ikram, Nur Kusaira K.

    2016-01-01

    biomass in various ecosystems, bryophytes are a seldom part of ethnomedicine and rarely subject to medicinal and chemical analyses. Still, hundreds of novel natural products have been isolated from bryophytes. Bryophytes have been shown to contain numerous potentially useful natural products, including...... loss, plant growth regulators and allelopathic activities. Bryophytes also cause allergies and contact dermatitis. All these effects highlight bryophytes as potential source for herbal remedies and production of chemicals to be used in various products....

  20. Bryophyte in the Beginning of Terrestrial Life

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    Özcan ŞİMŞEK

    2016-12-01

    Full Text Available The beginning of life has been wondered by human beings since ancient ages. The widely accepted opinion is that life began in water and after that landed. In this process, the landing of plants and adapting to terrestrial life of plants are important stages. The last 20 years it’s been done many researches to find out the relationship of bryophytes and tracheophytes. The results of these researches revealed that in evolutionary development process bryophytes and tracheophytes are sister groups. Thesis about earliest land plants are bryophytes is widely accepted recent years. To understand evolutionary process and plants of today’s better, researches about bryophytes must increase.

  1. The Use of Bryophytes as Indicators of Hydric Soils and Wetland Hydrology during Wetland Delineations in the United States

    Science.gov (United States)

    2010-09-01

    readily observed without the aid of optical magnification, including all vascular plant species and mosses (e.g., Sphagnum spp.), as well as large algae ...in lakes, pools or ponds ) or rheophilous (occurring in streams or running water). In addition, many bryophytes are classified as obligate aquatics...Mosses and other bryophytes, an illustrated glossary. 2nd ed. New Zealand: Micro -Optics Press. Malcom, N., J. Shevock, and D. Norris. 2009

  2. Vascular pattern formation in plants.

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    Scarpella, Enrico; Helariutta, Ykä

    2010-01-01

    Reticulate tissue systems exist in most multicellular organisms, and the principles underlying the formation of cellular networks have fascinated philosophers, mathematicians, and biologists for centuries. In particular, the beautiful and varied arrangements of vascular tissues in plants have intrigued mankind since antiquity, yet the organizing signals have remained elusive. Plant vascular tissues form systems of interconnected cell files throughout the plant body. Vascular cells are aligned with one another along continuous lines, and vascular tissues differentiate at reproducible positions within organ environments. However, neither the precise path of vascular differentiation nor the exact geometry of vascular networks is fixed or immutable. Several recent advances converge to reconcile the seemingly conflicting predictability and plasticity of vascular tissue patterns. A control mechanism in which an apical-basal flow of signal establishes a basic coordinate system for body axis formation and vascular strand differentiation, and in which a superimposed level of radial organizing cues elaborates cell patterns, would generate a reproducible tissue configuration in the context of an underlying robust, self-organizing structure, and account for the simultaneous regularity and flexibility of vascular tissue patterns. Copyright 2010 Elsevier Inc. All rights reserved.

  3. Comparative cryptogam ecology: a review of bryophyte and lichen traits that drive biogeochemistry.

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    Cornelissen, Johannes H C; Lang, Simone I; Soudzilovskaia, Nadejda A; During, Heinjo J

    2007-05-01

    Recent decades have seen a major surge in the study of interspecific variation in functional traits in comparative plant ecology, as a tool to understanding and predicting ecosystem functions and their responses to environmental change. However, this research has been biased almost exclusively towards vascular plants. Very little is known about the role and applicability of functional traits of non-vascular cryptogams, particularly bryophytes and lichens, with respect to biogeochemical cycling. Yet these organisms are paramount determinants of biogeochemistry in several biomes, particularly cold biomes and tropical rainforests, where they: (1) contribute substantially to above-ground biomass (lichens, bryophytes); (2) host nitrogen-fixing bacteria, providing major soil N input (lichens, bryophytes); (3) control soil chemistry and nutrition through the accumulation of recalcitrant polyphenols (bryophytes) and through their control over soil and vegetation hydrology and temperatures; (4) both promote erosion (rock weathering by lichens) and prevent it (biological crusts in deserts); (5) provide a staple food to mammals such as reindeer (lichens) and arthropodes, with important feedbacks to soils and biota; and (6) both facilitate and compete with vascular plants. Here we review current knowledge about interspecific variation in cryptogam traits with respect to biogeochemical cycling and discuss to what extent traits and measuring protocols needed for bryophytes and lichens correspond with those applied to vascular plants. We also propose and discuss several new or recently introduced traits that may help us understand and predict the control of cryptogams over several aspects of the biogeochemistry of ecosystems. Whilst many methodological challenges lie ahead, comparative cryptogam ecology has the potential to meet some of the important challenges of understanding and predicting the biogeochemical and climate consequences of large-scale environmental changes driving

  4. Effects of bryophytes on succession from alkaline marsh to Sphagnum bog

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    Glime, J.M.; Wetzel, R.G.; Kennedy, B.J.

    1982-10-01

    The alkaline eastern marsh of Lawrence Lake, a marl lake in southwestern Michigan, was sampled by randomly placed line transects to determine the bryophyte cover and corresponding vascular plant zones. Cluster analysis indicated three distinct bryophyte zones which correspond with the recognized vascular plant zones. Mosses occupied over 50% of the surface in some areas. Invasion of Sphagnum, vertical zonation of the mosses on hummocks, zonation with distance from the lake, the abundance of non-Sphagnum moss hummocks, and the ability of the non-Sphagnum species to lower the pH of marsh water during laboratory incubations are evidence that non-Sphagnum mosses facilitate succession from alkaline marsh to Sphagnum bog.

  5. The ALDH21 gene found in lower plants and some vascular plants codes for a NADP+ -dependent succinic semialdehyde dehydrogenase.

    Science.gov (United States)

    Kopečná, Martina; Vigouroux, Armelle; Vilím, Jan; Končitíková, Radka; Briozzo, Pierre; Hájková, Eva; Jašková, Lenka; von Schwartzenberg, Klaus; Šebela, Marek; Moréra, Solange; Kopečný, David

    2017-10-01

    Lower plant species including some green algae, non-vascular plants (bryophytes) as well as the oldest vascular plants (lycopods) and ferns (monilophytes) possess a unique aldehyde dehydrogenase (ALDH) gene named ALDH21, which is upregulated during dehydration. However, the gene is absent in flowering plants. Here, we show that ALDH21 from the moss Physcomitrella patens codes for a tetrameric NADP + -dependent succinic semialdehyde dehydrogenase (SSALDH), which converts succinic semialdehyde, an intermediate of the γ-aminobutyric acid (GABA) shunt pathway, into succinate in the cytosol. NAD + is a very poor coenzyme for ALDH21 unlike for mitochondrial SSALDHs (ALDH5), which are the closest related ALDH members. Structural comparison between the apoform and the coenzyme complex reveal that NADP + binding induces a conformational change of the loop carrying Arg-228, which seals the NADP + in the coenzyme cavity via its 2'-phosphate and α-phosphate groups. The crystal structure with the bound product succinate shows that its carboxylate group establishes salt bridges with both Arg-121 and Arg-457, and a hydrogen bond with Tyr-296. While both arginine residues are pre-formed for substrate/product binding, Tyr-296 moves by more than 1 Å. Both R121A and R457A variants are almost inactive, demonstrating a key role of each arginine in catalysis. Our study implies that bryophytes but presumably also some green algae, lycopods and ferns, which carry both ALDH21 and ALDH5 genes, can oxidize SSAL to succinate in both cytosol and mitochondria, indicating a more diverse GABA shunt pathway compared with higher plants carrying only the mitochondrial ALDH5. © 2017 The Authors The Plant Journal © 2017 John Wiley & Sons Ltd.

  6. Concentrations of selected heavy metals in bryophyte tissues at Cu-mine heap Podlipa in Ľubietová (Central Slovakia)

    Science.gov (United States)

    Širka, Pavel; Midula, Pavol

    2017-04-01

    Mine heaps and wastes created by mining industry belong to one of the most extreme man-made habitat types. In addition to their specific microclimatic conditions mine heaps are also characterized by increased contents of heavy metals and toxic substances in the soil substrate. These substances are transported into plant bodies and create difficult conditions for their growth. However, there are some plants that can cope with extremely high metal contents and are capable of growing on metalliferous habitats. These plants develop unique adaptation mechanisms and basically represent modified ecotypes with specific tolerances to certain heavy metals adapted through microevolutionary processes. The toxic effects of heavy metals on vascular plants are known for quite a long time, however, bryophytes are also known to accumulate certain heavy metals without any visible signs of damage. Because of this ability they have been successfully used in biomonitoring. Chemical analysis of contaminants in samples of bryophytes can reflect the state of environmental pollution. The aim of this work was to analyze the concentrations of 6 heavy metals (Fe, Cu, Zn, Mn, Pb and Cd) in tissues of 16 bryophyte samples at an abandoned Cu deposit Podlipa in Ľubietová and to compare them with concentrations of these elemens in soil samples and 9 vascular plant species (belonging to different growth forms) in a research performed by Andráš et al. (2014) in the studied area. Bryophytes were collected at 10 sampling sites randomly chosen in the dump-field area and consist of 14 different moss species. Only above-ground parts of bryophyte thalli (separated from rhizoids, gravel, soil, needles etc.) were used for analysis. Samples were dried at room temperature and subjected to microwave mineralization (MWS - 2 Berghof). The detailed procedure is defined in the Application Report MWS - 2 / Food, Pharma, Cosmetics (Berghof). In order to determine the concentrations of studied elements, atomic

  7. Vascular plants promote ancient peatland carbon loss with climate warming.

    Science.gov (United States)

    Walker, Tom N; Garnett, Mark H; Ward, Susan E; Oakley, Simon; Bardgett, Richard D; Ostle, Nicholas J

    2016-05-01

    Northern peatlands have accumulated one third of the Earth's soil carbon stock since the last Ice Age. Rapid warming across northern biomes threatens to accelerate rates of peatland ecosystem respiration. Despite compensatory increases in net primary production, greater ecosystem respiration could signal the release of ancient, century- to millennia-old carbon from the peatland organic matter stock. Warming has already been shown to promote ancient peatland carbon release, but, despite the key role of vegetation in carbon dynamics, little is known about how plants influence the source of peatland ecosystem respiration. Here, we address this issue using in situ (14)C measurements of ecosystem respiration on an established peatland warming and vegetation manipulation experiment. Results show that warming of approximately 1 °C promotes respiration of ancient peatland carbon (up to 2100 years old) when dwarf-shrubs or graminoids are present, an effect not observed when only bryophytes are present. We demonstrate that warming likely promotes ancient peatland carbon release via its control over organic inputs from vascular plants. Our findings suggest that dwarf-shrubs and graminoids prime microbial decomposition of previously 'locked-up' organic matter from potentially deep in the peat profile, facilitating liberation of ancient carbon as CO2. Furthermore, such plant-induced peat respiration could contribute up to 40% of ecosystem CO2 emissions. If consistent across other subarctic and arctic ecosystems, this represents a considerable fraction of ecosystem respiration that is currently not acknowledged by global carbon cycle models. Ultimately, greater contribution of ancient carbon to ecosystem respiration may signal the loss of a previously stable peatland carbon pool, creating potential feedbacks to future climate change. © 2016 John Wiley & Sons Ltd.

  8. Vegetation of Europe: hierarchical floristic classification system of vascular plant, bryophyte, lichen, and algal communities

    Czech Academy of Sciences Publication Activity Database

    Mucina, L.; Bültmann, H.; Dierssen, K.; Theurillat, J. P.; Raus, T.; Carni, A.; Šumberová, Kateřina; Willner, W.; Dengler, J.; Gavilán García, R.; Chytrý, M.; Hájek, M.; Di Pietro, R.; Iakushenko, D.; Pallas, J.; Daniëls, F. J. A.; Bergmeier, E.; Santos Guerra, A.; Ermakov, N.; Valachovič, M.; Schaminée, J.H.J.; Lysenko, T.; Didukh, Y. P.; Pignatti, S.; Rodwell, J. S.; Capelo, J.; Weber, H. E.; Solomeshch, A.; Dimopoulos, P.; Aguiar, C.; Hennekens, S. M.; Tichý, L.

    2016-01-01

    Roč. 19, Suppl. 1 (2016), s. 3-264 ISSN 1402-2001 R&D Projects: GA ČR GB14-36079G Institutional support: RVO:67985939 Keywords : Europe * syntaxonomy * vegetation classification Subject RIV: EH - Ecology, Behaviour Impact factor: 2.474, year: 2016

  9. Vegetation of Europe: hierarchical floristic classification system of vascular plant, bryophyte, lichen, and algal communities

    NARCIS (Netherlands)

    Mucina, L.; Bültmann, Helga; Dierssen, Klaus; Theurillat, Jean-Paul; Raus, Thomas; Carni, Andraz; Šumberová, Kateřina; Willner, Wolfgang; Dengler, J.; Schaminee, J.H.J.; Hennekens, S.M.

    2016-01-01

    Aims: Vegetation classification consistent with the Braun-Blanquet approach is
    widely used in Europe for applied vegetation science, conservation planning
    and landmanagement. During the long history of syntaxonomy,many concepts
    and names of vegetation units have been proposed, but there

  10. Uses of Bryophytes

    Indian Academy of Sciences (India)

    important. The multifarious uses and applications of the bryophyte flora are being increasingly recognized .... The physical structure of peat is highly absorbent and perme- .... bial activity has been seen in extracts ofReboulia andPaliaviciania,.

  11. Forensic botany: usability of bryophyte material in forensic studies.

    Science.gov (United States)

    Virtanen, Viivi; Korpelainen, Helena; Kostamo, Kirsi

    2007-10-25

    Two experiments were performed to test the relevance of bryophyte (Plantae, Bryophyta) material for forensic studies. The first experiment was conducted to reveal if, and how well, plant fragments attach to footwear in general. In the test, 16 persons walked outdoors wearing rubber boots or hiking boots. After 24h of use outdoors the boots were carefully cleaned, and all plant fragments were collected. Afterwards, all plant material was examined to identify the species. In the second experiment, fresh material of nine bryophyte species was kept in a shed in adverse conditions for 18 months, after which DNA was extracted and subjected to genotyping to test the quality of the material. Both experiments give support for the usability of bryophyte material in forensic studies. The bryophyte fragments become attached to shoes, where they remain even after the wearer walks on a dry road for several hours. Bryophyte DNA stays intact, allowing DNA profiling after lengthy periods following detachment from the original plant source. Based on these experiments, and considering the fact that many bryophytes are clonal plants, we propose that bryophytes are among the most usable plants to provide botanical evidence for forensic investigations.

  12. Early vascular plants in the Czech Republic

    OpenAIRE

    Uhlířová, Monika

    2017-01-01

    Vascular plants are characterized as a group of plants, which are already fully adapted to live on the land. Their evolution is a result of a set of adaptations that have required the necessary changes at anatomical and morphological level. Some evidences about the rise of vascular plants appear in the fossil record from the Middle Ordovician in the form of spores and later also from the Early Silurian in the form of megafossils. The aim of the thesis is to briefly describe and discuss the mo...

  13. Bryophytes and revegetation of coal spoils in southern Iowa. [14 refs

    Energy Technology Data Exchange (ETDEWEB)

    Carvey, K.; Farrar, D.R.; Glenn-Lewin, D.C.

    1976-01-01

    Strip mining of coal in southern Iowa has left many scattered areas of coal spoils which provide a type of habitat unique to the region. The occurrence and distribution of 29 mosses and 2 liverworts on these spoils was determined and related to the general process of spoil revegetation. The spoil bryophyte flora was compared with Conard's (1956) list of bryophytes for the region. An increase in per cent cover and in species diversity of bryophytes was observed with increasing age of spoils, and was correlated with increased vascular plant cover. Dicranella heteromalla and Ceratodon purpureus were found to be common throughout the spoils, whereas all other species were limited to more protected sites, especially on north-facing slopes. Mosses did not appear to colonize very exposed areas on the spoils, but were limited to areas with some protection provided, especially by vascular plants. Several disjunct or highly localized moss populations were found including one new state record and thirteen new county records.

  14. Small-scale hydropower plants and rare bryophytes and lichens. Knowledge and lack of knowledge; Smaakraftverk og sjeldne moser og lav. Kunnskap og kunnskapsmangler

    Energy Technology Data Exchange (ETDEWEB)

    Evju, Marianne; Hassel, Kristian; Hagen, Dagmar; Erikstad, Lars

    2011-08-15

    There is a large and increasing interest for the development of small-scale hydropower in Norway. Small-scale hydropower plants may impact the biological diversity negatively through destruction, degradation or fragmentation of habitats. Both the environmental investigations and the treatment of applications for small-scale hydropower plants put a great emphasis on red listed species, and in particular on red-listed bryophytes and lichens growing in stream ravines and in meadows and rock faces influenced by waterfalls. Bryophytes and lichens can be difficult to identify in the field, and knowledge of the species' ecology, distribution and population sizes is insufficient. A large review of environmental investigations of small-scale hydropower plants, documented that red-listed lichens were rarely recorded, and red-listed bryophytes were never recorded. In this report, we try to make visible the knowledge we have and the knowledge we lack of red listed bryophytes and lichens in areas in which the development of small-scale hydropower is relevant. Most focus is placed on bryophytes. The report is mainly a collation of existing knowledge. There is a great variation among stream ravines in the occurrence of species. Several factors, such as stability of moisture conditions, tree species composition and bedrock, interact to affect the occurrence of species. Red-listed bryophytes and lichens occur both in the forest and in affiliation with the stream. A reduction of local moisture, through e.g. logging of forest close to the stream or reduction of the water flow, will probably affect the species negatively. River regulation will change the frequency of flooding and affect the ice drift in the stream, which may negatively affect species living on dead wood in or close to the stream. Several species are vulnerable to deteriorated habitat quality and habitat fragmentation as their habitat requirements are narrow and their dispersal capacity is limited. However, we

  15. Modeling species distributions from heterogeneous data for the biogeographic regionalization of the European bryophyte flora.

    Directory of Open Access Journals (Sweden)

    Rubén G Mateo

    Full Text Available The definition of biogeographic regions provides a fundamental framework for a range of basic and applied questions in biogeography, evolutionary biology, systematics and conservation. Previous research suggested that environmental forcing results in highly congruent regionalization patterns across taxa, but that the size and number of regions depends on the dispersal ability of the taxa considered. We produced a biogeographic regionalization of European bryophytes and hypothesized that (1 regions defined for bryophytes would differ from those defined for other taxa due to the highly specific eco-physiology of the group and (2 their high dispersal ability would result in the resolution of few, large regions. Species distributions were recorded using 10,000 km2 MGRS pixels. Because of the lack of data across large portions of the area, species distribution models employing macroclimatic variables as predictors were used to determine the potential composition of empty pixels. K-means clustering analyses of the pixels based on their potential species composition were employed to define biogeographic regions. The optimal number of regions was determined by v-fold cross-validation and Moran's I statistic. The spatial congruence of the regions identified from their potential bryophyte assemblages with large-scale vegetation patterns is at odds with our primary hypothesis. This reinforces the notion that post-glacial migration patterns might have been much more similar in bryophytes and vascular plants than previously thought. The substantially lower optimal number of clusters and the absence of nested patterns within the main biogeographic regions, as compared to identical analyses in vascular plants, support our second hypothesis. The modelling approach implemented here is, however, based on many assumptions that are discussed but can only be tested when additional data on species distributions become available, highlighting the substantial

  16. Lake sediment multi-taxon DNA from North Greenland records early post-glacial appearance of vascular plants and accurately tracks environmental changes

    DEFF Research Database (Denmark)

    Epp, L. S.; Gussarova, C.; Boessenkool, S.

    2015-01-01

    temperatures. Lake sediments contain DNA paleorecords of the surrounding ecosystems and can be used to retrieve a variety of organismal groups from a single sample. In this study, we analyzed vascular plant, bryophyte, algal (in particular diatom) and copepod DNA retrieved from a sediment core spanning...... phases, and distinct temporal changes in plant presence were recovered. The plant DNA was mostly in agreement with expected vegetation history, but very early occurrences of vascular plants, including the woody Empetrum nigrum, document terrestrial vegetation very shortly after glacial retreat. Our study...... core. Our DNA record was stratigraphically coherent, with no indication of leaching between layers, and our cross-taxon comparisons were in accordance with previously inferred local ecosystem changes. Authentic ancient plant DNA was retrieved from nearly all layers, both from the marine and the limnic...

  17. Total flavonoid concentrations of bryophytes from Tianmu Mountain, Zhejiang Province (China: Phylogeny and ecological factors.

    Directory of Open Access Journals (Sweden)

    Xin Wang

    Full Text Available The flavonoids in bryophytes may have great significance in phylogeny and metabolism research. However, to date there has been little research on bryophyte metabolites, especially flavonoids. To redress this somewhat, we determined flavonoid concentrations of bryophytes from Tianmu Mountain through a colorimetric assay and considered the factors influencing the results. This is the first time that the flavonoid contents of bryophytes have been examined in detail. The results revealed a range of total flavonoid concentrations in 90 samples collected from Tianmu Mountain from 1.8 to 22.3 mg/g (w/w. The total flavonoid contents of liverworts were generally higher than those of mosses; acrocarpous mosses had generally higher values than that of pleurocarpous mosses. The total flavonoid contents of bryophytes growing at lower light levels were general higher than those growing in full-sun. The total flavonoid contents of epiphytic bryophytes were highest, while those of aquatic bryophytes were the lowest. Total flavonoid contents of species growing at low-latitudes were much higher than those at high-latitude individuals. In conclusion, total flavonoid contents of bryophytes have some connection with plant phylogeny; more flavonoids might be contained in relatively primitive bryophytes. Meanwhile, the effects of ecological factors on total flavonoid contents of bryophytes exist; light and habitat (especially tree habitat and river habitat might be representative factor.

  18. Vascular Plants of the Hanford Site

    International Nuclear Information System (INIS)

    Sackschewsky, Michael R.; Downs, Janelle L.

    2001-01-01

    This report provides an updated listing of the vascular plants present on and near the U.S. Department of Energy Hanford Site. This document is an update of a listing of plants prepared by Sackschewdky et al. in 1992. Since that time there has been a significant increase in the botanical knowledge of the Hanford Site. The present listing is based on an examination of herbarium collections held at PNNL, at WSU-Tri Cities, WSU-Pullman, Brigham Young University, and The University of Washington, and on examination of ecological literature derived from the Hanford and Benton county areas over the last 100 years. Based on the most recent analysis, there are approximately 725 different plant species that have been documented on or around the Hanford Site. This represents an approximate 20% increase in the number of species reported within Sackschewsky et al. (1992). This listing directly supports DOE and contractor efforts to assess the potential impacts of Hanford Site operations

  19. Establishing a minimum postmortem interval of human remains in an advanced state of skeletonization using the growth rate of bryophytes and plant roots.

    Science.gov (United States)

    Cardoso, H F V; Santos, A; Dias, R; Garcia, C; Pinto, M; Sérgio, C; Magalhães, T

    2010-09-01

    This paper illustrates the usefulness and efficiency of botanical evidence in establishing a minimum postmortem interval (PMI). The case under analysis refers to the remains of an adult male in an advanced state of skeletonization recovered from a wooded area in northern Portugal. The skeleton showed several taphonomical changes, which included the presence of green algae, bryophytes, and growing shrub roots in, around, and through the remains. By determining the age of both the bryophytes and shrub roots, it was concluded that the minimum amount of time elapsed since death was 3 years, to which several months or a few years have to be added to account for the complete decomposition of the remains. The disappearance of the presumptive individual had occurred 6 years before and is fully consistent with the estimate of the PMI. This report illustrates a novel use of bryophytes in a forensic setting.

  20. Therapeutic potential of bryophytes and derived compounds against cancer

    Directory of Open Access Journals (Sweden)

    Abhijit Dey

    2015-08-01

    Full Text Available Bryophytes, taxonomically placed between the algae and the pteridophytes, are divided into three classes such as Liverworts, Hornworts and Mosses. Indigenous use involves this small group of plants to treat various diseases. Bryophytes have been investigated pharmacologically for active biomolecules. Several constituents with therapeutic potential have been isolated, characterized and investigated for antibacterial, antifungal, antiviral, antioxidative, antiinflamatory and anticancerous efficacy. The present review deals with the literature covering the anticancerous potential of bryophytes. Apart from the examples of the compounds and the containing bryophyte genera, the authors have tried to include the examples of cancer cell lines on which the efficacy have been tested and the mode of action of certain cytotoxic agents. Crude extracts and isolated compounds from bryophytes were found to possess potent cytotoxic properties. Different types of terpenoids and bibenzyls have been reported among the most potent cytotoxic compounds. Most of these compounds were found to induce apoptosis by activating a number of genes and enzymes. Biochemical markers such as DNA fragmentation, nuclear condensation, proteolysis of poly (ADP-ribose polymerase, activation of caspases, inhibition of antiapoptotic nuclear transcriptional factor-kappaB, activation of p38 mitogen-activated protein kinase etc. have been found to be associated with apoptotic and necrotic response. This review summarizes recent scientific findings and suggests further investigations to evaluate the cytotoxic efficacy of bryophytes.

  1. Hyphomycetes (fungos conidiais associados a briófitas em decomposição Hyphomycetes (conidial fungi associated with decomposing bryophytes

    Directory of Open Access Journals (Sweden)

    Rosely Ana Piccolo Grandi

    2008-06-01

    Full Text Available Com o objetivo de verificar quais Hyphomycetes participam da decomposição de briófitas, foram feitas coletas esporádicas de exemplares das plantas no Instituto de Botânica, Parque Estadual das Fontes do Ipiranga, São Paulo, SP e na Reserva Biológica de Paranapiacaba, Santo André, SP, de setembro/2001 a fevereiro/2006. Foram coletadas oito espécies de briófitas e aplicada a técnica da lavagem sucessiva de substratos para isolamento dos fungos. Foram identificados 17 táxons de Hyphomycetes. Os fungos obtidos já foram encontrados no folhedo de várias plantas vasculares mas estão sendo referidos, no Brasil, pela primeira vez sobre briófitas. Merece destaque o isolamento de Arthrobotrys oligospora Fresen. e Monacrosporium aphrobrochum (Drechsler Subram., que apresentam estruturas para aprisionar nematóides, mostrando que em briófitas em decomposição ocorrem representantes de fungos conidiais predadores de nematóides.Bryophyte specimens were collected occasionally at the Botanical Institute, Fontes do Ipiranga State Park, São Paulo, SP and Paranapiacaba Biological Reserve, Santo André, SP, from September 2001 to February 2006, aiming to verify which Hyphomycetes take part in bryophyte decomposition. Eight species of bryophytes were collected and the technique of successive washing was applied to plant material to isolate the fungi. Seventeen taxa of Hyphomycetes were isolated. These fungi were previously recorded on leaf litter of vascular plants but this is the first time they are reported on bryophytes in Brazil. It is relevant to note that Arthrobotrys oligospora Fresen. and Monacrosporium aphrobrochum (Drechsler Subram. were isolated and these fungi have structures to capture nematodes, showing that nematode predatory conidial fungi can occur on dead bryophytes.

  2. Vascular Plants of the Hanford Site

    Energy Technology Data Exchange (ETDEWEB)

    Sackschewsky, Michael R.; Downs, Janelle L.

    2001-09-28

    This report provides an updated listing of the vascular plants present on and near the U.S. Department of Energy Hanford Site. This document is an update of a listing of plants prepared by Sackschewdky et al. in 1992. Since that time there has been a significant increase in the botanical knowledge of the Hanford Site. The present listing is based on an examination of herbarium collections held at PNNL, at WSU-Tri Cities, WSU-Pullman, Bringham Young University, and The University of Washington, and on examination of ecological literature derived from the Hanford and Benton county areas over the last 100 years. Based on the most recent analysis, there are approximately 725 different plant species that have been documented on or around the Hanford Site. This represents an approximate 20% increase in the number of species reported within Sackschewsky et al. (1992). This listing directly supports DOE and contractor efforts to assess the potential impacts of Hanford Site operations on the biological environment, including impacts to rare habitats and to species listed as endangered or\\ threatened. This document includes a listing of plants currently listed as endangered, threatened, or otherwise of concern to the Washington Natural Heritage Program or the U.S. Fish and Wildlife Service, as well as those that are currently listed as noxious weeds by the State of Washington. Also provided is an overview of how plants on the Hanford Site can be used by people. This information may be useful in developing risk assessment models, and as supporting information for clean-up level and remediation decisions.

  3. Metal accumulation by stream bryophytes, related to chemical speciation

    Energy Technology Data Exchange (ETDEWEB)

    Tipping, E. [Centre for Ecology and Hydrology, Lancaster Environment Centre, Library Avenue, Bailrigg, Lancaster LA1 4AP (United Kingdom)], E-mail: et@ceh.ac.uk; Vincent, C.D.; Lawlor, A.J.; Lofts, S. [Centre for Ecology and Hydrology, Lancaster Environment Centre, Library Avenue, Bailrigg, Lancaster LA1 4AP (United Kingdom)

    2008-12-15

    Metal accumulation by aquatic bryophytes was investigated using data for headwater streams of differing chemistry. The Windermere Humic Aqueous Model (WHAM) was applied to calculate chemical speciation, including competitive proton and metal interactions with external binding sites on the plants. The speciation modelling approach gives smaller deviations between observed and predicted bryophyte contents of Cu, Zn, Cd and Pb than regressions based on total filtered metal concentrations. If all four metals, and Ni, are considered together, the WHAM predictions are superior at the 1% level. Optimised constants for bryophyte binding by the trace metals are similar to those for humic substances and simple carboxylate ligands. Bryophyte contents of Na, Mg and Ca are approximately explained by binding at external sites, while most of the K is intracellular. Oxide phases account for some of the Al, and most of the Mn, Fe and Co. - Speciation modelling can be used to interpret the accumulation of Ni, Cu, Zn, Cd and Pb by bryophytes, supporting its use to quantify trace metal bioavailability in the field.

  4. Bryophyte and vascular plant responses to base-richness and water level gradients in Western Carpathian Sphagnum-rich mires

    Czech Academy of Sciences Publication Activity Database

    Hájková, Petra; Hájek, Michal

    2004-01-01

    Roč. 39, č. 4 (2004), s. 335-351 ISSN 1211-9520 R&D Projects: GA ČR(CZ) GA206/02/0568 Institutional research plan: CEZ:AV0Z6005908 Keywords : fen * poor-rich gradient * water table Subject RIV: EF - Botanics Impact factor: 0.968, year: 2004

  5. Correlates of monoicy and dioicy in hornworts, the apparent sister group to vascular plants.

    Science.gov (United States)

    Villarreal, Juan Carlos; Renner, Susanne S

    2013-11-02

    Whether male and female gametes are produced by single or separate individuals shapes plant mating and hence patterns of genetic diversity among and within populations. Haploid-dominant plants ("bryophytes": liverworts, mosses and hornworts) can have unisexual (dioicous) or bisexual (monoicous) gametophytes, and today, 68% of liverwort species, 57% of moss species, and 40% of hornwort species are dioicous. The transitions between the two sexual systems and possible correlations with other traits have been studied in liverworts and mosses, but not hornworts. Here we use a phylogeny for 98 of the 200 species of hornworts, the sister group to vascular plants, representing roughly equal proportions of all monoicous and all dioicous species, to test whether transitions in sexual systems are predominantly from monoicy to dioicy as might be expected based on studies of mosses. We further investigate possible correlations between sexual system and spore size, antheridium number, ploidy level, and diversification rate, with character selection partly based on findings in mosses and liverworts. Hornworts underwent numerous transitions between monoicy and dioicy. The transition rate from dioicy to monoicy was 2× higher than in the opposite direction, but monoicous groups have higher extinction rates; diversification rates do not correlate with sexual system. A correlation important in mosses, that between monoicy and polyploidy, apparently plays a small role: of 20 species with chromosome counts, only one is polyploid, the monoicous Anthoceros punctatus. A contingency test revealed that transitions to dioicy were more likely in species with small spores, supporting the hypothesis that small but numerous spores may be advantageous for dioicous species that depend on dense carpets of gametophytes for reproductive assurance. However, we found no evidence for increased antheridium-per-chamber numbers in dioicous species. Sexual systems in hornworts are labile, and the higher

  6. The lichen and bryophyte vegetation of Cuverville Island, Antarctica

    NARCIS (Netherlands)

    de Leeuw, C; Aptroot, A; van Zanten, B

    1998-01-01

    In the Antarctic summer of 1993 the vegetation of Cuverville Island, a small island near the west coast of the Antarctic Peninsula, was mapped and described. Eleven different plant communities of algae, lichens, bryophytes and spermatophytes have been distinguished. The 51 species Vary from endemic

  7. Phytohormone profiling across the bryophytes

    Czech Academy of Sciences Publication Activity Database

    Záveská Drábková, Lenka; Dobrev, Petre; Motyka, Václav

    2015-01-01

    Roč. 10, č. 5 (2015), s. 1-19, e0125411 E-ISSN 1932-6203 R&D Projects: GA ČR(CZ) GAP506/11/0774 Institutional support: RVO:67985939 ; RVO:61389030 Keywords : cytokinins * auxins * bryophytes Subject RIV: EF - Botanics; ED - Physiology (UEB-Q) Impact factor: 3.057, year: 2015

  8. Methane dynamics in Northern Wetlands: Significance of vascular plants

    Energy Technology Data Exchange (ETDEWEB)

    Joabsson, Anna

    2001-09-01

    The studies presented illustrate several different aspects of the impact of vascular plants on methane emissions from northern natural wetlands. The subject has been approached on different scales, ranging from the study of microbial substrates in the vicinity of a single plant root, to an attempt to extrapolate some of the results to the entire northern hemisphere north of 50 meridian. The main overall conclusions from the papers are that vascular plants affect net methane emissions 1) by offering an efficient route of transport to the atmosphere so that methane oxidation in oxic surface soils is avoided, and 2) by being sources of methanogenic substrate. The degree to which vascular wetland plants affect methane emissions seems to be dependent on species-specific differences in both the capacity to act as gas conduits and the exudation of labile carbon compounds to the soil. An intimate coupling between vascular plant production and methane emission was found in an Arctic tundra wetland, although other environmental variables (water table, temperature) also contributed significantly to the explained variation in methane exchange. Studies of vascular plant extidation of organic acids suggest that the available pool of methanogenic substrates is both qualitatively and quantitatively correlated to vascular plant production (photosynthetic rate). On global scales, vascular plant production as a single factor does not seem to be sufficient to explain the majority of variation in methane flux patterns. Based on comparable experiments at five different sites in the northwestern Eurasian and Greenlandic North, we suggest that mean seasonal soil temperature is the best predictor of methane exchange on broad spatial and temporal scales.

  9. The plant vascular system: Evolution, development and functions

    Science.gov (United States)

    William J. Lucas; Andrew Groover; Raffael Lichtenberger; Kaori Furuta; Shri-Ram Yadav; Yka Helariutta; Xin-Qiang He; Hiroo Fukuda; Julie Kang; Siobhan M. Brady; John W. Patrick; John Sperry; Akiko Yoshida; Ana-Flor Lopez-Millan; Michael A. Grusak; Pradeep Kachroo

    2013-01-01

    The emergence of the tracheophyte-based vascular system of land plants had major impacts on the evolution of terrestrial biology, in general, through its role in facilitating the development of plants with increased stature, photosynthetic output, and ability to colonize a greatly expanded range of environmental habitats. Recently, considerable progress has been made...

  10. The perception of strigolactones in vascular plants.

    Science.gov (United States)

    Lumba, Shelley; Holbrook-Smith, Duncan; McCourt, Peter

    2017-05-17

    Small-molecule hormones play central roles in plant development, ranging from cellular differentiation and organ formation to developmental response instruction in changing environments. A recently discovered collection of related small molecules collectively called strigolactones are of particular interest, as these hormones also function as ecological communicators between plants and fungi and between parasitic plants and their hosts. Advances from model plant systems have begun to unravel how, as a hormone, strigolactone is perceived and transduced. In this Review, we summarize this information and examine how understanding strigolactone hormone signaling is leading to insights into parasitic plant infections. We specifically focus on how the development of chemical probes can be used in combination with model plant systems to dissect strigolactone's perception in the parasitic plant Striga hermonthica. This information is particularly relevant since Striga is considered one of the largest impediments to food security in sub-Saharan Africa.

  11. Diversification of Root Hair Development Genes in Vascular Plants.

    Science.gov (United States)

    Huang, Ling; Shi, Xinhui; Wang, Wenjia; Ryu, Kook Hui; Schiefelbein, John

    2017-07-01

    The molecular genetic program for root hair development has been studied intensively in Arabidopsis ( Arabidopsis thaliana ). To understand the extent to which this program might operate in other plants, we conducted a large-scale comparative analysis of root hair development genes from diverse vascular plants, including eudicots, monocots, and a lycophyte. Combining phylogenetics and transcriptomics, we discovered conservation of a core set of root hair genes across all vascular plants, which may derive from an ancient program for unidirectional cell growth coopted for root hair development during vascular plant evolution. Interestingly, we also discovered preferential diversification in the structure and expression of root hair development genes, relative to other root hair- and root-expressed genes, among these species. These differences enabled the definition of sets of genes and gene functions that were acquired or lost in specific lineages during vascular plant evolution. In particular, we found substantial divergence in the structure and expression of genes used for root hair patterning, suggesting that the Arabidopsis transcriptional regulatory mechanism is not shared by other species. To our knowledge, this study provides the first comprehensive view of gene expression in a single plant cell type across multiple species. © 2017 American Society of Plant Biologists. All Rights Reserved.

  12. Vascular Gene Expression: A Hypothesis

    Directory of Open Access Journals (Sweden)

    Angélica Concepción eMartínez-Navarro

    2013-07-01

    Full Text Available The phloem is the conduit through which photoassimilates are distributed from autotrophic to heterotrophic tissues and is involved in the distribution of signaling molecules that coordinate plant growth and responses to the environment. Phloem function depends on the coordinate expression of a large array of genes. We have previously identified conserved motifs in upstream regions of the Arabidopsis genes, encoding the homologs of pumpkin phloem sap mRNAs, displaying expression in vascular tissues. This tissue-specific expression in Arabidopsis is predicted by the overrepresentation of GA/CT-rich motifs in gene promoters. In this work we have searched for common motifs in upstream regions of the homologous genes from plants considered to possess a primitive vascular tissue (a lycophyte, as well as from others that lack a true vascular tissue (a bryophyte, and finally from chlorophytes. Both lycophyte and bryophyte display motifs similar to those found in Arabidopsis with a significantly low E-value, while the chlorophytes showed either a different conserved motif or no conserved motif at all. These results suggest that these same genes are expressed coordinately in non- vascular plants; this coordinate expression may have been one of the prerequisites for the development of conducting tissues in plants. We have also analyzed the phylogeny of conserved proteins that may be involved in phloem function and development. The presence of CmPP16, APL, FT and YDA in chlorophytes suggests the recruitment of ancient regulatory networks for the development of the vascular tissue during evolution while OPS is a novel protein specific to vascular plants.

  13. Diversity of vascular plants of Piestany and surroundings (presentation)

    International Nuclear Information System (INIS)

    Penzesova, A.; Galusova, T.

    2013-01-01

    In this presentation is a summary of the results of floristic research aimed at determining diversity of vascular plants of Piestany and its surroundings. Plant taxa we determined using the designation keys. We have compiled a list of plant species occurring in the monitored area, we evaluated the selected botanical-phytogeographical characteristics of flora, we've put together a list of local protected, endangered and rare species and a list of local invasive and expansive species according to sources. (Authors)

  14. Uses of Bryophytes

    Indian Academy of Sciences (India)

    heating value is superior to that of wood. House Construction. In parts of the globe where woody plants are scarce and bryo- phytes common, these tiny plants are used in the construction of houses and their furnishings. At Kapkot in the Himalayas, villagers use moss mats with shrubs, grasses, and bamboo to make a pharki ...

  15. Vascular Plants of the Chimbote Wetlands, Peru

    OpenAIRE

    Arana, César; Salinas, Letty

    2013-01-01

    Los humedales de Chimbote (09°05’51"S; 78°32’52"O) presentan una flora vascular compuesta por 41 especies en 18 familias. El 61% magnoliópsidas y el 39% liliópsidas. Las familias con mayor número de especies fueron Poaceae, Cyperaceae y Asteraceae. Las formas de crecimiento dominantes fueron las hierbas (85%) seguidas de arbustos (10%). En comparación con los humedales costeros de Lima, en Chimbote se presenta mayor riqueza de especies que en Medio Mundo (16 especies) y El Paraíso (25), aunqu...

  16. Stochastic processes dominate during boreal bryophyte community assembly.

    Science.gov (United States)

    Fenton, Nicole J; Bergeron, Yves

    2013-09-01

    Why are plant species found in certain locations and not in others? The study of community assembly rules has attempted to answer this question, and many studies articulate the historic dichotomy of deterministic (predictable niches) vs. stochastic (random or semi-random processes). The study of successional sequences to determine whether they converge, as would be expected by deterministic theory, or diverge, as stochastic theory would suggest, has been one method used to investigate this question. In this article we ask the question: Do similar boreal bryophyte communities develop in the similar habitat created by convergent succession after fires of different severities? Or do the stochastic processes generated by fires of different severity lead to different communities? Specifically we predict that deterministic structure will be more important for large forest-floor species than stochastic processes, and that the inverse will be true for small bryophyte species. We used multivariate regression trees and model selection to determine the relative weight of structure (forest structure, substrates, soil structure) and processes (fire severity) for two groups of bryophyte species sampled in 12 sites (seven high-severity and five low-severity fires). Contrary to our first hypothesis, processes were as important for large forest-floor bryophytes as for small pocket species. Fire severity, its interaction with the quality of available habitat, and its impact on the creation of biological legacies played dominant roles in determining community structure. In this study, sites with nearly identical forest structure, generated via convergent succession after high- and low-severity fire, were compared to see whether these sites supported similar bryophyte communities. While similar to some degree, both the large forest-floor species and the pocket species differed after high-severity fire compared to low-severity fire. This result suggests that the "how," or process of

  17. The vascular plants: open system of growth.

    Science.gov (United States)

    Basile, Alice; Fambrini, Marco; Pugliesi, Claudio

    2017-03-01

    What is fascinating in plants (true also in sessile animals such as corals and hydroids) is definitely their open and indeterminate growth, as a result of meristematic activity. Plants as well as animals are characterized by a multicellular organization, with which they share a common set of genes inherited from a common eukaryotic ancestor; nevertheless, circa 1.5 billion years of evolutionary history made the two kingdoms very different in their own developmental biology. Flowering plants, also known as angiosperms, arose during the Cretaceous Period (145-65 million years ago), and up to date, they count around 235,000 species, representing the largest and most diverse group within the plant kingdom. One of the foundations of their success relies on the plant-pollinator relationship, essentially unique to angiosperms that pushed large speciation in both plants and insects and on the presence of the carpel, the structure devoted to seed enclosure. A seed represents the main organ preserving the genetic information of a plant; during embryogenesis, the primary axis of development is established by two groups of pluripotent cells: the shoot apical meristem (SAM), responsible for gene rating all aboveground organs, and the root apical meristem (RAM), responsible for producing all underground organs. During postembryonic shoot development, axillary meristem (AM) initiation and outgrowth are responsible for producing all secondary axes of growth including inflorescence branches or flowers. The production of AMs is tightly linked to the production of leaves and their separation from SAM. As leaf primordia are formed on the flanks of the SAM, a region between the apex and the developing organ is established and referred to as boundary zone. Interaction between hormones and the gene network in the boundary zone is fundamental for AM initiation. AMs only develop at the adaxial base of the leaf; thus, AM initiation is also strictly associated with leaf polarity. AMs

  18. Toxicity, Uptake, and Translocation of Engineered Nanomaterials in Vascular plants.

    Science.gov (United States)

    Miralles, Pola; Church, Tamara L; Harris, Andrew T

    2012-09-04

    To exploit the promised benefits of engineered nanomaterials, it is necessary to improve our knowledge of their bioavailability and toxicity. The interactions between engineered nanomaterials and vascular plants are of particular concern, as plants closely interact with soil, water, and the atmosphere, and constitute one of the main routes of exposure for higher species, i.e. accumulation through the food chain. A review of the current literature shows contradictory evidence on the phytotoxicity of engineered nanomaterials. The mechanisms by which engineered nanomaterials penetrate plants are not well understood, and further research on their interactions with vascular plants is required to enable the field of phytotoxicology to keep pace with that of nanotechnology, the rapid evolution of which constantly produces new materials and applications that accelerate the environmental release of nanomaterials.

  19. Distributions of vascular plants in the Czech Republic. Part 3

    Czech Academy of Sciences Publication Activity Database

    Kaplan, Zdeněk; Danihelka, Jiří; Lepší, M.; Lepší, P.; Ekrt, L.; Chrtek, Jindřich; Kocián, J.; Prančl, Jan; Kobrlová, L.; Hroneš, M.; Šulc, Václav

    2016-01-01

    Roč. 88, č. 4 (2016), s. 459-544 ISSN 0032-7786 R&D Projects: GA ČR GB14-36079G Institutional support: RVO:67985939 Keywords : distribution * vascular plants * Czech Republic Subject RIV: EF - Botanics Impact factor: 3.000, year: 2016

  20. VASCULAR PLANTS AS ENGINEERS OF OXYGEN IN AQUATIC SYSTEMS

    Science.gov (United States)

    The impact of organisms on oxygen is one of the most dramatic examples of ecosystem engineering on Earth. In aquatic systems, which have much lower oxygen concentrations than the atmosphere, vascular aquatic plants can affect oxygen concentrations significantly not only on long t...

  1. Rare vascular plant species at risk : recovery by seeding?

    NARCIS (Netherlands)

    Pegtel, Dick M.

    . Rare vascular plant species are endangered worldwide. Population losses are most commonly caused by human-related factors. Conservation management seeks to halt this adverse trend and if possible, to enhance long-lasting self-sustainable populations. In general, rare species are poorly recruited

  2. Flora of vascular plants in the Chilgapsan Provincial Park, Korea

    Directory of Open Access Journals (Sweden)

    Ro-Young Lee

    2014-09-01

    Full Text Available The flora of Chilgapsan Provincial Park in Cheongyang-gun (Chungcheongnam-do, Korea was surveyed from 2000 to 2014. In 19 field surveys, vascular plants were revealed 490 taxa belonging to 97 families, 309 genera, 433 species, four subspecies, 48 varieties, and five forms. Plants of various categories were discovered in this study. For the Korean endemic plants 15 taxa were recorded, and 11 taxa designated by the Korean Forest Service as rare plants were investigated in this region. The plants above the third degree among the floristic regional indicator plants designated by the Korean Ministry of Environment were 10 taxa. In addition, 33 taxa of naturalized and 73 taxa of cultivated plants were recorded.

  3. Physicochemical hydrodynamics of porous structures in vascular plants

    Science.gov (United States)

    Ryu, Jeongeun; Ahn, Sungsook; Kim, Seung-Gon; Kim, Taejoo; Lee, Sang Joon

    2013-11-01

    Transport of sap flow through xylem conduits of vascular plants has been considered as a passive process, because the xylem conduits are regarded as inert, dead wood. However, plants can actively regulate water transport using ion-mediated response for adapting to environmental changes. In order to understand the active regulation mechanism of physicochemical hydrodynamics of porous structures in vascular plants, the effects of specific ion types and their ionic ratios on the water transport were experimentally investigated under in vivocondition. Based on the experimental results, the principle of ionic effects will be explained through in-vitro comparative experiments and theoretical considerations. This work was supported by the National Research Foundation of Korea(NRF) grant funded by the Korea government (MSIP) (No. 2008-0061991).

  4. The compact Selaginella genome identifies changes in gene content associated with the evolution of vascular plants

    Energy Technology Data Exchange (ETDEWEB)

    Grigoriev, Igor V.; Banks, Jo Ann; Nishiyama, Tomoaki; Hasebe, Mitsuyasu; Bowman, John L.; Gribskov, Michael; dePamphilis, Claude; Albert, Victor A.; Aono, Naoki; Aoyama, Tsuyoshi; Ambrose, Barbara A.; Ashton, Neil W.; Axtell, Michael J.; Barker, Elizabeth; Barker, Michael S.; Bennetzen, Jeffrey L.; Bonawitz, Nicholas D.; Chapple, Clint; Cheng, Chaoyang; Correa, Luiz Gustavo Guedes; Dacre, Michael; DeBarry, Jeremy; Dreyer, Ingo; Elias, Marek; Engstrom, Eric M.; Estelle, Mark; Feng, Liang; Finet, Cedric; Floyd, Sandra K.; Frommer, Wolf B.; Fujita, Tomomichi; Gramzow, Lydia; Gutensohn, Michael; Harholt, Jesper; Hattori, Mitsuru; Heyl, Alexander; Hirai, Tadayoshi; Hiwatashi, Yuji; Ishikawa, Masaki; Iwata, Mineko; Karol, Kenneth G.; Koehler, Barbara; Kolukisaoglu, Uener; Kubo, Minoru; Kurata, Tetsuya; Lalonde, Sylvie; Li, Kejie; Li, Ying; Litt, Amy; Lyons, Eric; Manning, Gerard; Maruyama, Takeshi; Michael, Todd P.; Mikami, Koji; Miyazaki, Saori; Morinaga, Shin-ichi; Murata, Takashi; Mueller-Roeber, Bernd; Nelson, David R.; Obara, Mari; Oguri, Yasuko; Olmstead, Richard G.; Onodera, Naoko; Petersen, Bent Larsen; Pils, Birgit; Prigge, Michael; Rensing, Stefan A.; Riano-Pachon, Diego Mauricio; Roberts, Alison W.; Sato, Yoshikatsu; Scheller, Henrik Vibe; Schulz, Burkhard; Schulz, Christian; Shakirov, Eugene V.; Shibagaki, Nakako; Shinohara, Naoki; Shippen, Dorothy E.; Sorensen, Iben; Sotooka, Ryo; Sugimoto, Nagisa; Sugita, Mamoru; Sumikawa, Naomi; Tanurdzic, Milos; Theilsen, Gunter; Ulvskov, Peter; Wakazuki, Sachiko; Weng, Jing-Ke; Willats, William W.G.T.; Wipf, Daniel; Wolf, Paul G.; Yang, Lixing; Zimmer, Andreas D.; Zhu, Qihui; Mitros, Therese; Hellsten, Uffe; Loque, Dominique; Otillar, Robert; Salamov, Asaf; Schmutz, Jeremy; Shapiro, Harris; Lindquist, Erika; Lucas, Susan; Rokhsar, Daniel

    2011-04-28

    We report the genome sequence of the nonseed vascular plant, Selaginella moellendorffii, and by comparative genomics identify genes that likely played important roles in the early evolution of vascular plants and their subsequent evolution

  5. Diversity of vascular plants of Piestany and surroundings

    International Nuclear Information System (INIS)

    Penzesova, A.; Galusova, T.

    2013-01-01

    In the present work is a summary of the results of floristic research aimed at determining diversity of vascular plants of Piestany and its surroundings. Plant taxa we determined using the designation keys. We have compiled a list of plant species occurring in the monitored area, we evaluated the selected botanical-phytogeographical characteristics of flora, we've put together a list of local protected, endangered and rare species and a list of local invasive and expansive species according to sources. (Authors)

  6. Temporal deconvolution of vascular plant signatures delivered to coastal sediments

    Science.gov (United States)

    Vonk, J.; Drenzek, N. J.; Hughen, K. A.; Stanley, R.; Montluçon, D. B.; McIntyre, C.; Southon, J. R.; Santos, G.; Andersson, A.; Sköld, M.; Eglinton, T. I.

    2017-12-01

    Presently, relatively little is known about the amount of time that lapses between the photosynthetic fixation of carbon by vascular land plants and its incorporation into the marine sedimentary record. It is clear that there are multiple potential intermediate storage pools and transport trajectories that vascular plant carbon may experience, and the age of vascular plant carbon accumulating in marine sediments will reflect these different pre-depositional histories. Here we use molecular-level radiocarbon (14C) analysis to develop down-core 14C profiles for higher plant leaf wax-derived fatty acids isolated from sediments from three sites across a 60-degrees latitudinal gradient (Cariaco Basin, Saanich Inlet, and Mackenzie Delta). The sediment profiles were used as a direct measure of the storage and transport times experienced by these biomolecular tracer compounds. Residence times are evaluated by comparing these records to the 14C history of atmospheric CO2. Using a modeling framework, we conclude that there is, in addition to a variable "young" pool, a millennial pool of compounds that consists of 49-78 % of the fractional contribution of organic carbon (OC) that exhibits variable ages for the different depositional settings. For the Mackenzie Delta sediments, we find a mean age of the millennial pool of 28 ky, suggesting pre-aging in permafrost soils, whereas the millennial pool in Saanich Inlet and Cariaco Basin sediments is younger with 7.9 and 2.4-3.2 ky, respectively, suggesting limited storage in terrestrial reservoirs. The "young" pool, conditionally defined as vascular plant C in deltaic and marine settings undergoes pre-aging in terrestrial reservoirs. The age distribution, reflecting storage and transport times, depends on landscape-specific factors such as local topography, hydrographic characteristics, and degree of soil build-up and preservation.

  7. Macroecological and macroevolutionary patterns of leaf herbivory across vascular plants.

    Science.gov (United States)

    Turcotte, Martin M; Davies, T Jonathan; Thomsen, Christina J M; Johnson, Marc T J

    2014-07-22

    The consumption of plants by animals underlies important evolutionary and ecological processes in nature. Arthropod herbivory evolved approximately 415 Ma and the ensuing coevolution between plants and herbivores is credited with generating much of the macroscopic diversity on the Earth. In contemporary ecosystems, herbivory provides the major conduit of energy from primary producers to consumers. Here, we show that when averaged across all major lineages of vascular plants, herbivores consume 5.3% of the leaf tissue produced annually by plants, whereas previous estimates are up to 3.8× higher. This result suggests that for many plant species, leaf herbivory may play a smaller role in energy and nutrient flow than currently thought. Comparative analyses of a diverse global sample of 1058 species across 2085 populations reveal that models of stabilizing selection best describe rates of leaf consumption, and that rates vary substantially within and among major plant lineages. A key determinant of this variation is plant growth form, where woody plant species experience 64% higher leaf herbivory than non-woody plants. Higher leaf herbivory in woody species supports a key prediction of the plant apparency theory. Our study provides insight into how a long history of coevolution has shaped the ecological and evolutionary relationships between plants and herbivores. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

  8. Stomatal Blue Light Response Is Present in Early Vascular Plants.

    Science.gov (United States)

    Doi, Michio; Kitagawa, Yuki; Shimazaki, Ken-ichiro

    2015-10-01

    Light is a major environmental factor required for stomatal opening. Blue light (BL) induces stomatal opening in higher plants as a signal under the photosynthetic active radiation. The stomatal BL response is not present in the fern species of Polypodiopsida. The acquisition of a stomatal BL response might provide competitive advantages in both the uptake of CO2 and prevention of water loss with the ability to rapidly open and close stomata. We surveyed the stomatal opening in response to strong red light (RL) and weak BL under the RL with gas exchange technique in a diverse selection of plant species from euphyllophytes, including spermatophytes and monilophytes, to lycophytes. We showed the presence of RL-induced stomatal opening in most of these species and found that the BL responses operated in all euphyllophytes except Polypodiopsida. We also confirmed that the stomatal opening in lycophytes, the early vascular plants, is driven by plasma membrane proton-translocating adenosine triphosphatase and K(+) accumulation in guard cells, which is the same mechanism operating in stomata of angiosperms. These results suggest that the early vascular plants respond to both RL and BL and actively regulate stomatal aperture. We also found three plant species that absolutely require BL for both stomatal opening and photosynthetic CO2 fixation, including a gymnosperm, C. revoluta, and the ferns Equisetum hyemale and Psilotum nudum. © 2015 American Society of Plant Biologists. All Rights Reserved.

  9. Method for treating wastewater using microorganisms and vascular aquatic plants

    Science.gov (United States)

    Wolverton, B. C. (Inventor)

    1983-01-01

    A method for treating wastewater compresses subjecting the wastewater to an anaerobic setting step for at least 6 hours and passing the liquid effluent from the anaerobic settling step through a filter cell in an upflow manner. There the effluent is subjected first to the action of anaerobic and facultative microorganisms, and then to the action of aerobic microorganisms and the roots of at least one vascular aquatic plant.

  10. New Chorological Data for Rare Vascular Plants from Romania

    Directory of Open Access Journals (Sweden)

    Anastasiu Paulina

    2015-11-01

    Full Text Available New chorological data about seven rare vascular plant taxa are reported in the present paper: Conringia austriaca, Jurinea multiflora, Linaria arvensis, Nonea pallens, Ophrys apifera, Ophrys scolopax subsp. cornuta, Saponaria officinalis. For Linaria arvensis, previously considered doubtful in the absence of the herbarium material, we confirm its presence in Romania. The report of Nonea pallens is the first for Dobrogea, while the report of Jurinea multiflora is the first for Muntenia region of Romania.

  11. Dataset of herbarium specimens of threatened vascular plants in Catalonia.

    Science.gov (United States)

    Nualart, Neus; Ibáñez, Neus; Luque, Pere; Pedrol, Joan; Vilar, Lluís; Guàrdia, Roser

    2017-01-01

    This data paper describes a specimens' dataset of the Catalonian threatened vascular plants conserved in five public Catalonian herbaria (BC, BCN, HGI, HBIL and MTTE). Catalonia is an administrative region of Spain that includes large autochthon plants diversity and 199 taxa with IUCN threatened categories (EX, EW, RE, CR, EN and VU). This dataset includes 1,618 records collected from 17 th century to nowadays. For each specimen, the species name, locality indication, collection date, collector, ecology and revision label are recorded. More than 94% of the taxa are represented in the herbaria, which evidence the paper of the botanical collections as an essential source of occurrence data.

  12. Exclusion of brown lemmings reduces vascular plant cover and biomass in Arctic coastal tundra: resampling of a 50 + year herbivore exclosure experiment near Barrow, Alaska

    International Nuclear Information System (INIS)

    Johnson, D R; Lara, M J; Tweedie, C E; Shaver, G R; Batzli, G O; Shaw, J D

    2011-01-01

    To determine the role lemmings play in structuring plant communities and their contribution to the 'greening of the Arctic', we measured plant cover and biomass in 50 + year old lemming exclosures and control plots in the coastal tundra near Barrow, Alaska. The response of plant functional types to herbivore exclusion varied among land cover types. In general, the abundance of lichens and bryophytes increased with the exclusion of lemmings, whereas graminoids decreased, although the magnitude of these responses varied among land cover types. These results suggest that sustained lemming activity promotes a higher biomass of vascular plant functional types than would be expected without their presence and highlights the importance of considering herbivory when interpreting patterns of greening in the Arctic. In light of the rapid environmental change ongoing in the Arctic and the potential regional to global implications of this change, further exploration regarding the long-term influence of arvicoline rodents on ecosystem function (e.g. carbon and energy balance) should be considered a research priority.

  13. Radiocontamination patterns of vascular plants in a forest ecosystem

    International Nuclear Information System (INIS)

    Nimis, P.L.; Bolognini, G.; Giovani, C.

    1994-01-01

    This study is based on measurements of radiocesium and potassium-40 in leaves, stems and roots of 48 vascular plants in a natural beech forest in the Carnic Alps (NE Italy). The data have been submitted to numerical classification, and the main results are: (a) radiocontamination patterns and ecology of the species are well related, (b) three main groups of species with different radiocontamination can be distinguished: plants in clearings, forest plants rooting in the organic soil layer, forest plants rooting in the mineral layer; (c) radiocesium tends to be retained in the roots, especially in plants in the clearings; (d) Pteridophytes, contrary to all other plants, are able to discriminate between cesium and potassium at leaf level; (e) for all other species, cesium and potassium, once taken up by the plant, exhibit a similar behaviour; (f) total contamination by radiocesium is related to the depth of the root systems, and to the unequal distribution of radiocesium in the soil profile. Species-specific mechanisms of differential absorption are not evident in the investigated forest; the radiocontamination of plants can be easily explained in ecological terms. Radiocontamination on a water basis (Bq/l) is suggested as being much more appropriate for solving certain radioecological problems

  14. Patterns and Environmental Determinants of Medicinal Plant : Vascular Plant Ratios in Xinjiang, Northwest China

    Science.gov (United States)

    Zhang, Bengang; Xiao, Peigen; Qi, Yaodong; Zhang, Zhao; Liu, Haitao; Li, Xiaojin; Wang, Guoping; Terwei, André

    2016-01-01

    With both a full collection of native vascular plant distributions and a full checklist of source plants of the Chinese Materia Medica (CMM), the Uygur Medicine (UM), and the Kazak Medicine (KM) for the Xinjiang region, we defined medicinal plant: vascular plant ratios (simplified as medicinal plant ratios hereafter) as the value of medicinal plant richness divided by vascular plant richness. We aimed to find whether the ratios are constant or change in different environments, which environmental variables determine medicinal plant ratios, and whether the ratios are more influenced by human or by natural environments. Finally, suggestions for medicinal plant conservation were addressed. We found that (1) medicinal plant ratios were not constant, and they were high in the Tarim Basin which was largely covered by desert, while they were relatively low in mountainous areas, especially in the Tianshan Mountains where the general species richness was high; (2) medicinal plant ratios were not significantly influenced by human activities, indicated by human population density distributions, but they were highly correlated with plant species richness and climate, i.e. ratios decreased with plant species richness and MAP, and were related quadratically with MAT; (3) CMM ratio and UM ratio were more influenced by plant richness than by climate, while KM ratio was more influenced by climate. We concluded that the percentages of plants used as medicines were not influenced by distances from human settlements, but were determined by species richness or climate. We suggest that (1), in general, the medicinal plant ratio could be a complementary indicator for medicinal plant conservation planning and (2), for the region of Xinjiang, not only high diversity areas, but also some extreme environments should be considered as compensation for a better protection of medicinal plants. PMID:27391239

  15. Patterns and Environmental Determinants of Medicinal Plant : Vascular Plant Ratios in Xinjiang, Northwest China.

    Directory of Open Access Journals (Sweden)

    Liping Li

    Full Text Available With both a full collection of native vascular plant distributions and a full checklist of source plants of the Chinese Materia Medica (CMM, the Uygur Medicine (UM, and the Kazak Medicine (KM for the Xinjiang region, we defined medicinal plant: vascular plant ratios (simplified as medicinal plant ratios hereafter as the value of medicinal plant richness divided by vascular plant richness. We aimed to find whether the ratios are constant or change in different environments, which environmental variables determine medicinal plant ratios, and whether the ratios are more influenced by human or by natural environments. Finally, suggestions for medicinal plant conservation were addressed. We found that (1 medicinal plant ratios were not constant, and they were high in the Tarim Basin which was largely covered by desert, while they were relatively low in mountainous areas, especially in the Tianshan Mountains where the general species richness was high; (2 medicinal plant ratios were not significantly influenced by human activities, indicated by human population density distributions, but they were highly correlated with plant species richness and climate, i.e. ratios decreased with plant species richness and MAP, and were related quadratically with MAT; (3 CMM ratio and UM ratio were more influenced by plant richness than by climate, while KM ratio was more influenced by climate. We concluded that the percentages of plants used as medicines were not influenced by distances from human settlements, but were determined by species richness or climate. We suggest that (1, in general, the medicinal plant ratio could be a complementary indicator for medicinal plant conservation planning and (2, for the region of Xinjiang, not only high diversity areas, but also some extreme environments should be considered as compensation for a better protection of medicinal plants.

  16. Patterns and Environmental Determinants of Medicinal Plant : Vascular Plant Ratios in Xinjiang, Northwest China.

    Science.gov (United States)

    Li, Liping; Zhang, Bengang; Xiao, Peigen; Qi, Yaodong; Zhang, Zhao; Liu, Haitao; Li, Xiaojin; Wang, Guoping; Terwei, André

    2016-01-01

    With both a full collection of native vascular plant distributions and a full checklist of source plants of the Chinese Materia Medica (CMM), the Uygur Medicine (UM), and the Kazak Medicine (KM) for the Xinjiang region, we defined medicinal plant: vascular plant ratios (simplified as medicinal plant ratios hereafter) as the value of medicinal plant richness divided by vascular plant richness. We aimed to find whether the ratios are constant or change in different environments, which environmental variables determine medicinal plant ratios, and whether the ratios are more influenced by human or by natural environments. Finally, suggestions for medicinal plant conservation were addressed. We found that (1) medicinal plant ratios were not constant, and they were high in the Tarim Basin which was largely covered by desert, while they were relatively low in mountainous areas, especially in the Tianshan Mountains where the general species richness was high; (2) medicinal plant ratios were not significantly influenced by human activities, indicated by human population density distributions, but they were highly correlated with plant species richness and climate, i.e. ratios decreased with plant species richness and MAP, and were related quadratically with MAT; (3) CMM ratio and UM ratio were more influenced by plant richness than by climate, while KM ratio was more influenced by climate. We concluded that the percentages of plants used as medicines were not influenced by distances from human settlements, but were determined by species richness or climate. We suggest that (1), in general, the medicinal plant ratio could be a complementary indicator for medicinal plant conservation planning and (2), for the region of Xinjiang, not only high diversity areas, but also some extreme environments should be considered as compensation for a better protection of medicinal plants.

  17. Distribution and functional traits of charophytes and vascular plants

    DEFF Research Database (Denmark)

    Båstrup-Spohr, Lars

    rare species are specialists in particular environments, while the abundant species have traits such as broad salinity tolerance, tall shoots, vegetative reproduction and variable life form. Vascular plants, in contrast to charophytes, occupy the entire gradient from submerged to drained conditions......A large variety of plant species of very different evolutionary origin are found within and along the margins of aquatic ecosystems. These species have very different adaptations depending on the particular environmental condition under which they grow. This thesis examines the role...... of these adaptations or functional traits for the distribution on large scales and along specific environmental gradients. Characean algae (charophytes) are an ancient group of aquatic plants found in most aquatic ecosystems. I confirmed that they have declined markedly during the 20th century, most likely...

  18. Use of Non Vascular Plant Organisms as Indicators of Urban Air Pollution (Tunja, Boyacá, Colombiano)

    OpenAIRE

    Diego Fernando Simijaca Salcedo; Maria Eugenia Morales Puentes; Diana Lúcia Vargas Rojas

    2014-01-01

    Lichens and bryophytes are useful organisms in air quality determination. In the city of Tunja (Boyacá, Colombia), is evident the lack of green areas by the increase of building, which contributes to the detriment of the atmospheric purity making unhealthy conditions to the citizens and habitats and population reduction of cryptogamic plants. Using the Index of Atmospheric Purity (IAP) we identified the greater influence air pollutants areas. Parmotrema  austrosinense has the highest frequenc...

  19. Investigating water transport through the xylem network in vascular plants.

    Science.gov (United States)

    Kim, Hae Koo; Park, Joonghyuk; Hwang, Ildoo

    2014-04-01

    Our understanding of physical and physiological mechanisms depends on the development of advanced technologies and tools to prove or re-evaluate established theories, and test new hypotheses. Water flow in land plants is a fascinating phenomenon, a vital component of the water cycle, and essential for life on Earth. The cohesion-tension theory (CTT), formulated more than a century ago and based on the physical properties of water, laid the foundation for our understanding of water transport in vascular plants. Numerous experimental tools have since been developed to evaluate various aspects of the CTT, such as the existence of negative hydrostatic pressure. This review focuses on the evolution of the experimental methods used to study water transport in plants, and summarizes the different ways to investigate the diversity of the xylem network structure and sap flow dynamics in various species. As water transport is documented at different scales, from the level of single conduits to entire plants, it is critical that new results be subjected to systematic cross-validation and that findings based on different organs be integrated at the whole-plant level. We also discuss the functional trade-offs between optimizing hydraulic efficiency and maintaining the safety of the entire transport system. Furthermore, we evaluate future directions in sap flow research and highlight the importance of integrating the combined effects of various levels of hydraulic regulation.

  20. Reconstructing relative genome size of vascular plants through geological time.

    Science.gov (United States)

    Lomax, Barry H; Hilton, Jason; Bateman, Richard M; Upchurch, Garland R; Lake, Janice A; Leitch, Ilia J; Cromwell, Avery; Knight, Charles A

    2014-01-01

    The strong positive relationship evident between cell and genome size in both animals and plants forms the basis of using the size of stomatal guard cells as a proxy to track changes in plant genome size through geological time. We report for the first time a taxonomic fine-scale investigation into changes in stomatal guard-cell length and use these data to infer changes in genome size through the evolutionary history of land plants. Our data suggest that many of the earliest land plants had exceptionally large genome sizes and that a predicted overall trend of increasing genome size within individual lineages through geological time is not supported. However, maximum genome size steadily increases from the Mississippian (c. 360 million yr ago (Ma)) to the present. We hypothesise that the functional relationship between stomatal size, genome size and atmospheric CO2 may contribute to the dichotomy reported between preferential extinction of neopolyploids and the prevalence of palaeopolyploidy observed in DNA sequence data of extant vascular plants. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

  1. Vascular Plant and Vertebrate Inventory of Chiricahua National Monument

    Science.gov (United States)

    Powell, Brian F.; Schmidt, Cecilia A.; Halvorson, William L.; Anning, Pamela

    2009-01-01

    This report summarizes the results of the first comprehensive inventory of vascular plants and vertebrates at Chiricahua National Monument (NM) in Arizona. This project was part of a larger effort to inventory vascular plants and vertebrates in eight National Park Service units in the Sonoran Desert Network of parks in Arizona and New Mexico. In 2002, 2003, and 2004 we surveyed for plants and vertebrates (amphibians, reptiles, birds, and mammals) at Chiricahua NM to document the presence of species within the boundaries of the monument. Because we used repeatable study designs and standardized field methods, these inventories can serve as the first step in a biological monitoring program for the monument. This report is also the first summary of previous research from the monument and therefore it provides an important overview of survey efforts to date. We used data from our inventory and previous research to compile complete species lists for the monument and to assess inventory completeness. We recorded a total of 424 species, including 37 not previously found at the monument (Table 1). We found 10 species of non-native plants and one non-native mammal. Most non-native plants were found along the western boundary of the monument. Based on a review of our inventory and past research at the monument, there have been a total of 1,137 species of plants and vertebrates found at the monument. We believe the inventories of vascular plants and vertebrates are nearly complete and that the monument has one of the most complete inventories of any unit in the Sonoran Desert Network. The mammal community at the monument had the highest species richness (69 species) and the amphibian and reptile community was among the lowest species richness (33 species) of any park in the Sonoran Desert Network. Species richness of the plant and bird communities was intermediate. Among the important determinants of species richness for all groups is the geographic location of the monument

  2. Double-filter identification of vascular-expressed genes using Arabidopsis plants with vascular hypertrophy and hypotrophy.

    Science.gov (United States)

    Ckurshumova, Wenzislava; Scarpella, Enrico; Goldstein, Rochelle S; Berleth, Thomas

    2011-08-01

    Genes expressed in vascular tissues have been identified by several strategies, usually with a focus on mature vascular cells. In this study, we explored the possibility of using two opposite types of altered tissue compositions in combination with a double-filter selection to identify genes with a high probability of vascular expression in early organ primordia. Specifically, we generated full-transcriptome microarray profiles of plants with (a) genetically strongly reduced and (b) pharmacologically vastly increased vascular tissues and identified a reproducible cohort of 158 transcripts that fulfilled the dual requirement of being underrepresented in (a) and overrepresented in (b). In order to assess the predictive value of our identification scheme for vascular gene expression, we determined the expression patterns of genes in two unbiased subsamples. First, we assessed the expression patterns of all twenty annotated transcription factor genes from the cohort of 158 genes and found that seventeen of the twenty genes were preferentially expressed in leaf vascular cells. Remarkably, fifteen of these seventeen vascular genes were clearly expressed already very early in leaf vein development. Twelve genes with published leaf expression patterns served as a second subsample to monitor the representation of vascular genes in our cohort. Of those twelve genes, eleven were preferentially expressed in leaf vascular tissues. Based on these results we propose that our compendium of 158 genes represents a sample that is highly enriched for genes expressed in vascular tissues and that our approach is particularly suited to detect genes expressed in vascular cell lineages at early stages of their inception. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

  3. Gravity sensing and signal transduction in vascular plant primary roots.

    Science.gov (United States)

    Baldwin, Katherine L; Strohm, Allison K; Masson, Patrick H

    2013-01-01

    During gravitropism, the potential energy of gravity is converted into a biochemical signal. How this transfer occurs remains one of the most exciting mysteries in plant cell biology. New experiments are filling in pieces of the puzzle. In this review, we introduce gravitropism and give an overview of what we know about gravity sensing in roots of vascular plants, with special highlight on recent papers. When plant roots are reoriented sideways, amyloplast resedimentation in the columella cells is a key initial step in gravity sensing. This process somehow leads to cytoplasmic alkalinization of these cells followed by relocalization of auxin efflux carriers (PINs). This changes auxin flow throughout the root, generating a lateral gradient of auxin across the cap that upon transmission to the elongation zone leads to differential cell elongation and gravibending. We will present the evidence for and against the following players having a role in transferring the signal from the amyloplast sedimentation into the auxin signaling cascade: mechanosensitive ion channels, actin, calcium ions, inositol trisphosphate, receptors/ligands, ARG1/ARL2, spermine, and the TOC complex. We also outline auxin transport and signaling during gravitropism.

  4. Non-native vascular plants from Canary Islands (Spain): nomenclatural and taxonomical adjustments

    OpenAIRE

    Verloove, F.

    2013-01-01

    Se propone correcciones taxonómicas y nomenclaturales respecto a 88 taxones no nativos de la lista de plantas vasculares de las Islas Canarias (España). Non-native vascular plants from Canary Islands (Spain): nomenclatural and taxonomical adjustments. Corrections and other adjustments are proposed for 88 non-native taxa from the checklist of vascular plants from the Canary Islands (Spain).

  5. Vascular Plant and Vertebrate Inventory of Coronado National Memorial

    Science.gov (United States)

    Schmidt, Cecilia A.; Powell, Brian F.; Swann, Don E.; Halvorson, William L.

    2007-01-01

    We conducted inventories for amphibians and reptiles, birds, and mammals; and summarized past inventories for vascular plants at Coronado National Memorial (NM) in Arizona. We used our data as well as data from previous research to compile species lists for the memorial, assess inventory completeness, and make suggestions on future monitoring efforts. There have been 940 species of plants and vertebrates recorded at Coronado NM (Table 1), of which 46 (5%) are non-native. The species richness of the memorial is one of the highest in the Sonoran Desert Network of park units, third only to park units that are two and one-half (Chiricahua National Monument), 19 (Saguaro National Park) and 70 (Organ Pipe Cactus National Monument) times larger in area. The high species diversities are due to the large elevational gradient, overlap of bigeographical regions, wide range of geology and soils, and diverse vegetation communities present at the memorial. Changes in species composition have occurred at the memorial over the last 20 years in all major taxonomic groups. These changes are likely due to increases in grassy plant species (both native and non-native) at the lower elevations of the memorial. We suspect that grassy plant cover has increased because of changes in grazing intensity, introduction of some non-native species, and a recent fire. All recent vertebrate inventories have yielded grassland obligate species not previously recorded at the memorial. Based on the review of past studies, we believe the inventory for most taxa, except bats, is nearly complete, though some rare or elusive species will likely be added with additional survey effort.

  6. Vascular Plant and Vertebrate Inventory of Tuzigoot National Monument

    Science.gov (United States)

    Powell, Brian F.; Albrecht, E.W.; Halvorson, William Lee; Schmidt, Cecilia A.; Anning, P.; Docherty, K.

    2005-01-01

    Executive Summary From 2002 to 2004, we surveyed for plants and vertebrates (amphibians, reptiles, birds, and mammals) at Tuzigoot National Monument (NM) and adjacent areas in Arizona. This was the first effort of its kind in the area and was part of a larger effort to inventory vascular plants and vertebrates in eight National Park Service units in Arizona and New Mexico. In addition to our own surveys, we also compiled a complete list of species that have been found by previous studies. We found 330 species, including 142 that had not previously been recorded at the monument (Table 1). We found 39 species of non-native plants, 11 non-native fishes, three non-native birds, and one non-native species each of amphibian and mammal. Based on our work and that of others, there have been 597 species of plants and vertebrates found at the monument. The bird community at the monument had the highest species richness of any national park unit in central and southern Arizona. We found all other taxa to have intermediate species richness compared to other park units in the region. This extraordinary species richness observed for birds, as well as for some other taxa, is due primarily to Tavasci Marsh and the Verde River, two critical sources of perennial water, which provide habitat for many regionally rare or uncommon species. The location of the monument at the northern edge of the Sonoran Desert and at the southern edge of the Mogollon Rim also plays an important role in determining the distribution and community composition of the plant and vertebrate communities. Based on our findings, we believe the high number of non-native species, especially fish and plants, should be of particular management concern. We detail other management challenges, most notably the rapid increase in housing and associated commercial development near the monument, which will continue to impact the plant and vertebrate communities. Based on our data and a review of past studies, we believe the

  7. Aboveground persistence of vascular plants in relationship to the levels of airborne nutrient deposition

    NARCIS (Netherlands)

    Hendriks, R.J.J.; Ozinga, W.A.; Berg, van den L.J.L.; Noordwijk, E.; Schaminee, J.H.J.; Groenendael, van J.M.

    2014-01-01

    This paper examines whether high atmospheric nitrogen deposition affects aboveground persistence of vascular plants. We combined information on local aboveground persistence of vascular plants in 245 permanent plots in the Netherlands with estimated level of nitrogen deposition at the time of

  8. Morphological peculiarities of bryophytes asexual organs

    Directory of Open Access Journals (Sweden)

    Oksana Lobachevska

    2013-04-01

    Full Text Available The main types of brood organs of dominant bryophyte species on dumps of the mining factories were determined. The special features of morphology, localization and genesis of specialized asexual propagula and gemmae were detected. The analysis of their role in reproductive strategy of colonist species was conducted.

  9. Bryophytes from Tuxedni Wilderness area, Alaska

    Science.gov (United States)

    Schofield, W.B.; Talbot, S. S.; Talbot, S.L.

    2002-01-01

    The bryoflora of two small maritime islands, Chisik and Duck Island (2,302 ha), comprising Tuxedni Wilderness in western lower Cook Inlet, Alaska, was examined to determine species composition in an area where no previous collections had been reported. The field study was conducted from sites selected to represent the totality of environmental variation within Tuxedni Wilderness. Data were analyzed using published reports to compare the bryophyte distribution patterns at three levels, the Northern Hemisphere, North America, and Alaska. A total of 286 bryophytes were identified: 230 mosses and 56 liverworts. Bryum miniatum, Dichodontium olympicum, and Orthotrichum pollens are new to Alaska. The annotated list of species for Tuxedni Wilderness expands the known range for many species and fills distribution gaps within Hulte??n's Central Pacific Coast district. Compared with bryophyte distribution in the Northern Hemisphere, the bryoflora of Tuxedni Wilderness primarily includes taxa of boreal (61%), montane (13%), temperate (11%), arctic-alpine (7%), cosmopolitan (7%), distribution; 4% of the total moss flora are North America endemics. A brief summary of the botanical exploration of the general area is provided, as is a description of the bryophytes present in the vegetation and habitat types of Chisik and Duck Islands.

  10. Electrical output of bryophyte microbial fuel cell systems is sufficient to power a radio or an environmental sensor.

    Science.gov (United States)

    Bombelli, Paolo; Dennis, Ross J; Felder, Fabienne; Cooper, Matt B; Madras Rajaraman Iyer, Durgaprasad; Royles, Jessica; Harrison, Susan T L; Smith, Alison G; Harrison, C Jill; Howe, Christopher J

    2016-10-01

    Plant microbial fuel cells are a recently developed technology that exploits photosynthesis in vascular plants by harnessing solar energy and generating electrical power. In this study, the model moss species Physcomitrella patens , and other environmental samples of mosses, have been used to develop a non-vascular bryophyte microbial fuel cell (bryoMFC). A novel three-dimensional anodic matrix was successfully created and characterized and was further tested in a bryoMFC to determine the capacity of mosses to generate electrical power. The importance of anodophilic microorganisms in the bryoMFC was also determined. It was found that the non-sterile bryoMFCs operated with P. patens delivered over an order of magnitude higher peak power output (2.6 ± 0.6 µW m -2 ) than bryoMFCs kept in near-sterile conditions (0.2 ± 0.1 µW m -2 ). These results confirm the importance of the microbial populations for delivering electrons to the anode in a bryoMFC. When the bryoMFCs were operated with environmental samples of moss (non-sterile) the peak power output reached 6.7 ± 0.6 mW m -2 . The bryoMFCs operated with environmental samples of moss were able to power a commercial radio receiver or an environmental sensor (LCD desktop weather station).

  11. Interferences between Sphagnum and vascular plants: effects on plant community structure and peat formation

    OpenAIRE

    Malmer, Nils; Albinsson, C; Svensson, B M; Wallén, Bo

    2003-01-01

    The interference between vascular plants and peat mosses with respect to nitrogen and phosphorus was studied in a fertilization experiment and with respect to competition for light in a removal experiment in poor fens with either soligenous or topogenous hydrology using Narthecium ossifragum (L.) Huds. and three species of Sphagnum sect. Sphagnum as targets. Adding fertilizer either on the moss surface or below it confirmed the hypotheses of an asymmetric competition for nutrients, viz. that ...

  12. Vascular Plant and Vertebrate Inventory of Tumacacori National Historical Park

    Science.gov (United States)

    Powell, Brian F.; Albrecht, Eric W.; Halvorson, William L.; Schmidt, Cecilia A.; Anning, Pamela; Docherty, Kathleen

    2005-01-01

    Executive Summary This report summarizes the results of the first comprehensive biological inventory of Tumacacori National Historical Park (NHP) in southern Arizona. These surveys were part of a larger effort to inventory vascular plants and vertebrates in eight National Park Service units in Arizona and New Mexico. From 2000 to 2003 we surveyed for vascular plants and vertebrates (fish, amphibians, reptiles, birds, and mammals) at Tumacacori NHP to document presence of species within the administrative boundaries of the park's three units. Because we used repeatable study designs and standardized field techniques, these inventories can serve as the first step in a long-term monitoring program. We recorded 591 species at Tumacacori NHP, significantly increasing the number of known species for the park (Table 1). Species of note in each taxonomic group include: * Plants: second record in Arizona of muster John Henry, a non-native species that is ranked a 'Class A noxious weed' in California; * Amphibian: Great Plains narrow-mouthed toad; * Reptiles: eastern fence lizard and Sonoran mud turtle; * Birds: yellow-billed cuckoo, green kingfisher, and one observation of the endangered southwestern willow flycatcher; * Fishes: four native species including an important population of the endangered Gila topminnow in the Tumacacori Channel; * Mammals: black bear and all four species of skunk known to occur in Arizona. We recorded 79 non-native species (Table E.S.1), many of which are of management concern, including: Bermudagrass, tamarisk, western mosquitofish, largemouth bass, bluegill, sunfish, American bullfrog, feral cats and dogs, and cattle. We also noted an abundance of crayfish (a non-native invertebrate). We review some of the important non-native species and make recommendations to remove them or to minimize their impacts on the native biota of the park. Based on the observed species richness, Tumacacori NHP possesses high biological diversity of plants, fish

  13. Vascular Plant and Vertebrate Inventory of Tonto National Monument

    Science.gov (United States)

    Albrecht, Eric W.; Powell, Brian F.; Halvorson, William L.; Schmidt, Cecilia A.

    2007-01-01

    This report summarizes the results of the first biological inventory of plants and vertebrates at Tonto National Monument (NM). From 2001 to 2003, we surveyed for vascular plants and vertebrates (amphibians, reptiles, birds, and mammals) at Tonto NM to record species presence. We focused most of our efforts along the Cave Springs riparian area, but surveyed other areas as well. We recorded 149 species in the riparian area, and 369 species overall in the monument, including 65 plant species and four bird species that were previously unrecorded for the monument. We recorded 78 plant species in the riparian area that previous studies had not indicated were present there. Several species of each taxonomic group were found only in the riparian area, suggesting that because of their concentration in this small area these populations are vulnerable to disturbance and may be of management concern. Four of the bird species that we recorded (Bell's vireo, yellow warbler, summer tanager, and Abert's towhee) have been identified as riparian 'obligate' species by other sources. Bird species that are obligated to riparian areas are targets of conservation concern due to widespread degradation of riparian areas in the desert southwest over the last century. The flora and fauna of the riparian area would benefit from continued limited public access. The dependence of the riparian area on the spring and surface flow suggests monitoring of this resource per se would benefit management of the riparian area's flora and fauna as well. The monument would benefit from incorporating monitoring protocols developed by the Sonoran Desert Network Inventory and Monitoring program rather than initiating a separate program for the riparian area. Park managers can encourage the Inventory and Monitoring program to address the unique monitoring challenges presented by small spatial areas such as this riparian area, and can request specific monitoring recommendations. We suggest that repeat

  14. Vascular Plant and Vertebrate Inventory of Montezuma Castle National Monument

    Science.gov (United States)

    Schmidt, Cecilia A.; Drost, Charles A.; Halvorson, William Lee

    2006-01-01

    Executive Summary We summarize past inventory efforts for vascular plants and vertebrates at Montezuma Castle National Monument (NM) in Arizona. We used data from previous research to compile complete species lists for the monument and to assess inventory completeness. There have been 784 species recorded at Montezuma Castle NM, of which 85 (11%) are non-native. In each taxon-specific chapter we highlight areas of resources that contributed to species richness or unique species for the monument. Of particular importance are Montezuma Well and Beaver and Wet Beaver creeks and the surrounding riparian vegetation, which are responsible for the monument having one of the highest numbers of bird species in the Sonoran Desert Network of park units. Beaver Creek is also home to populations of federally-listed fish species of concern. Other important resources include the cliffs along the creeks and around Montezuma Well (for cliff and cave roosting bats). Based on the review of past studies, we believe the inventory for most taxa is nearly complete, though some rare or elusive species will be added with additional survey effort. We recommend additional inventory, monitoring and research studies.

  15. High migration rates shape the postglacial history of amphi-Atlantic bryophytes.

    Science.gov (United States)

    Désamoré, Aurélie; Patiño, Jairo; Mardulyn, Patrick; Mcdaniel, Stuart F; Zanatta, Florian; Laenen, Benjamin; Vanderpoorten, Alain

    2016-11-01

    Paleontological evidence and current patterns of angiosperm species richness suggest that European biota experienced more severe bottlenecks than North American ones during the last glacial maximum. How well this pattern fits other plant species is less clear. Bryophytes offer a unique opportunity to contrast the impact of the last glacial maximum in North America and Europe because about 60% of the European bryoflora is shared with North America. Here, we use population genetic analyses based on approximate Bayesian computation on eight amphi-Atlantic species to test the hypothesis that North American populations were less impacted by the last glacial maximum, exhibiting higher levels of genetic diversity than European ones and ultimately serving as a refugium for the postglacial recolonization of Europe. In contrast with this hypothesis, the best-fit demographic model involved similar patterns of population size contractions, comparable levels of genetic diversity and balanced migration rates between European and North American populations. Our results thus suggest that bryophytes have experienced comparable demographic glacial histories on both sides of the Atlantic. Although a weak, but significant genetic structure was systematically recovered between European and North American populations, evidence for migration from and towards both continents suggests that amphi-Atlantic bryophyte population may function as a metapopulation network. Reconstructing the biogeographic history of either North American or European bryophyte populations therefore requires a large, trans-Atlantic geographic framework. © 2016 John Wiley & Sons Ltd.

  16. Genome Analysis of Conserved Dehydrin Motifs in Vascular Plants

    Directory of Open Access Journals (Sweden)

    Ahmad A. Malik

    2017-05-01

    Full Text Available Dehydrins, a large family of abiotic stress proteins, are defined by the presence of a mostly conserved motif known as the K-segment, and may also contain two other conserved motifs known as the Y-segment and S-segment. Using the dehydrin literature, we developed a sequence motif definition of the K-segment, which we used to create a large dataset of dehydrin sequences by searching the Pfam00257 dehydrin dataset and the Phytozome 10 sequences of vascular plants. A comprehensive analysis of these sequences reveals that lysine residues are highly conserved in the K-segment, while the amino acid type is often conserved at other positions. Despite the Y-segment name, the central tyrosine is somewhat conserved, but can be substituted with two other small aromatic amino acids (phenylalanine or histidine. The S-segment contains a series of serine residues, but in some proteins is also preceded by a conserved LHR sequence. In many dehydrins containing all three of these motifs the S-segment is linked to the K-segment by a GXGGRRKK motif (where X can be any amino acid, suggesting a functional linkage between these two motifs. An analysis of the sequences shows that the dehydrin architecture and several biochemical properties (isoelectric point, molecular mass, and hydrophobicity score are dependent on each other, and that some dehydrin architectures are overexpressed during certain abiotic stress, suggesting that they may be optimized for a specific abiotic stress while others are involved in all forms of dehydration stress (drought, cold, and salinity.

  17. Distribution of rare earths, thorium and uranium in bryophytes and soils in Tripui Ecological Station, Minas Gerais, Brazil

    International Nuclear Information System (INIS)

    Palmieri, Helena E.L.; Nalini Junior, Herminio A.; Friese, Kurt

    2007-01-01

    The concentrations of rare earth elements (REEs), thorium and uranium were determined in liverworts (Noteroclada confluens (Tayl.) and Dumortirea hirsute (Sw.) Nees), in mosses (Leucobryum martianum (Hornsh.) Hampe, Vesicularia vesicularis (Schwaegr.) Broth., Pyrrhobruym spiniforme (Hedw.) Mitt. and Sematophyllum subsimplex (Hedw.) Mitt.) and in the soil upon which they were growing. The samples were collected on the margins of the main streams of the Tripui Ecological Station, located in the valley of the Tripui stream near the town of Ouro Preto, Minas Gerais State, Brazil. For decades, this Station has been the object of interest of many studies due to its historical, ecological and environmental importance. Analyses in bryophytes (mosses and liverworts) were determined by inductively coupled plasma mass spectrometry (ICP-MS) and in the soil samples by using neutron activation analysis (NAA), specifically the k 0 -standardization method and the energy dispersive spectrometry technique (EDS). Lanthanum (La), cerium (Ce) and neodymium (Nd) were present in higher concentrations in soils and bryophytes than other REEs. It was observed that in all the collected bryophytes species the elements Th, U, Y, La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er and Yb were transferred from the soil water to these plants. These bryophytes presented different capacities of accumulating these elements with the liverworts (Noteroclada confluens and Dumortirea hirsute) and the moss Leucobryum martianum showing a more efficient accumulation capacity than the other bryophyte species. (author)

  18. Moss and vascular plant indices in Ohio wetlands have similar environmental predictors

    Science.gov (United States)

    Stapanian, Martin A.; Schumacher, William; Gara, Brian; Adams, Jean V.; Viau, Nick

    2016-01-01

    Mosses and vascular plants have been shown to be reliable indicators of wetland habitat delineation and environmental quality. Knowledge of the best ecological predictors of the quality of wetland moss and vascular plant communities may determine if similar management practices would simultaneously enhance both populations. We used Akaike's Information Criterion to identify models predicting a moss quality assessment index (MQAI) and a vascular plant index of biological integrity based on floristic quality (VIBI-FQ) from 27 emergent and 13 forested wetlands in Ohio, USA. The set of predictors included the six metrics from a wetlands disturbance index (ORAM) and two landscape development intensity indices (LDIs). The best single predictor of MQAI and one of the predictors of VIBI-FQ was an ORAM metric that assesses habitat alteration and disturbance within the wetland, such as mowing, grazing, and agricultural practices. However, the best single predictor of VIBI-FQ was an ORAM metric that assessed wetland vascular plant communities, interspersion, and microtopography. LDIs better predicted MQAI than VIBI-FQ, suggesting that mosses may either respond more rapidly to, or recover more slowly from, anthropogenic disturbance in the surrounding landscape than vascular plants. These results supported previous predictive studies on amphibian indices and metrics and a separate vegetation index, indicating that similar wetland management practices may result in qualitatively the same ecological response for three vastly different wetland biological communities (amphibians, vascular plants, and mosses).

  19. Bilaterally symmetric axes with rhizoids composed the rooting structure of the common ancestor of vascular plants.

    Science.gov (United States)

    Hetherington, Alexander J; Dolan, Liam

    2018-02-05

    There are two general types of rooting systems in extant land plants: gametophyte rhizoids and sporophyte root axes. These structures carry out the rooting function in the free-living stage of almost all land plant gametophytes and sporophytes, respectively. Extant vascular plants develop a dominant, free-living sporophyte on which roots form, with the exception of a small number of taxa that have secondarily lost roots. However, fossil evidence indicates that early vascular plants did not develop sporophyte roots. We propose that the common ancestor of vascular plants developed a unique rooting system-rhizoidal sporophyte axes. Here we present a synthesis and reinterpretation of the rootless sporophytes of Horneophyton lignieri , Aglaophyton majus , Rhynia gwynne-vaughanii and Nothia aphylla preserved in the Rhynie chert. We show that the sporophyte rooting structures of all four plants comprised regions of plagiotropic (horizontal) axes that developed unicellular rhizoids on their underside. These regions of axes with rhizoids developed bilateral symmetry making them distinct from the other regions which were radially symmetrical. We hypothesize that rhizoidal sporophyte axes constituted the rooting structures in the common ancestor of vascular plants because the phylogenetic positions of these plants span the origin of the vascular lineage.This article is part of a discussion meeting issue 'The Rhynie cherts: our earliest terrestrial ecosystem revisited'. © 2017 The Authors.

  20. Plant physiology in theory and practice: an analysis of the WBE model for vascular plants.

    Science.gov (United States)

    Petit, Giai; Anfodillo, Tommaso

    2009-07-07

    The theoretical model of West, Brown and Enquist (hereafter WBE) proposed the fractal geometry of the transport system as the origin of the allometric scaling laws observed in nature. The WBE model has either been criticized for some restrictive and biologically unrealistic constraints or its reliability debated on the evidence of empirical tests. In this work, we revised the structure of the WBE model for vascular plants, highlighting some critical assumptions and simplifications and discuss them with regard to empirical evidence from plant anatomy and physiology. We conclude that the WBE model had the distinct merit of shedding light on some important features such as conduit tapering. Nonetheless, it is over-simplistic and a revised model would be desirable with an ontogenetic perspective that takes some important phenomena into account, such as the transformation of the inner sapwood into heartwood and the effect of hydraulic constraints in limiting the growth in height.

  1. Peatland Bryophytes in a Changing Environment : Ecophysiological Traits and Ecosystem Function

    OpenAIRE

    Granath, Gustaf

    2012-01-01

    Peatlands are peat forming ecosystems in which not fully decomposed plant material builds up the soil. The sequestration of carbon into peat is mainly associated with the bryophyte genus Sphagnum (peat mosses), which dominate and literally form most peatlands. The responses of Sphagnum to environmental change help us to understand peatland development and function and to predict future changes in a rapidly changing world. In this thesis, the overarching aim was to use ecophysiological traits ...

  2. Glacial refugia and post-glacial colonization patterns in European bryophytes

    OpenAIRE

    Kyrkjeeide, Magni Olsen; Stenøien, Hans K.; Flatberg, Kjell Ivar; Hassel, Kristian

    2014-01-01

    Most species are assumed to have survived south or east of the ice sheet covering northern Europe during the last glacial maximum. Molecular and macrofossil evidence suggests, however, that some species may have survived in ice-free areas in Scandinavia. In plants, inbreeding and vegetative growth are associated with low genetic load and enhanced survival in small, isolated populations. These characteristics are often found in bryophytes, possibly allowing them to survive extreme conditions i...

  3. Modelling the development and arrangement of the primary vascular structure in plants.

    Science.gov (United States)

    Cartenì, Fabrizio; Giannino, Francesco; Schweingruber, Fritz Hans; Mazzoleni, Stefano

    2014-09-01

    The process of vascular development in plants results in the formation of a specific array of bundles that run throughout the plant in a characteristic spatial arrangement. Although much is known about the genes involved in the specification of procambium, phloem and xylem, the dynamic processes and interactions that define the development of the radial arrangement of such tissues remain elusive. This study presents a spatially explicit reaction-diffusion model defining a set of logical and functional rules to simulate the differentiation of procambium, phloem and xylem and their spatial patterns, starting from a homogeneous group of undifferentiated cells. Simulation results showed that the model is capable of reproducing most vascular patterns observed in plants, from primitive and simple structures made up of a single strand of vascular bundles (protostele), to more complex and evolved structures, with separated vascular bundles arranged in an ordered pattern within the plant section (e.g. eustele). The results presented demonstrate, as a proof of concept, that a common genetic-molecular machinery can be the basis of different spatial patterns of plant vascular development. Moreover, the model has the potential to become a useful tool to test different hypotheses of genetic and molecular interactions involved in the specification of vascular tissues.

  4. Herbarium of the University of Malaga (Spain: Vascular Plants Collection

    Directory of Open Access Journals (Sweden)

    Jose García Sánchez

    2013-09-01

    Full Text Available The herbarium of University of Málaga (MGC Herbarium is formed by four biological collections. The vascular plants collection (MGC-Cormof is the main collection of the herbarium. MGC-Cormof dataset aims to digitize and publish data associated with over 76.000 specimens deposited in the collection, of which 97.2% of the specimens are identified at species level. Since 2011, the University of Malaga’s Central Research Service (SCAI has been responsible for maintaining the herbariums and the dataset. The collection is growing continuously, with an annual intake of about 1.500 specimens. Nearly 96% of the collection is digitized, by Herbar v3.7.1 software (F. Pando et al. 1996–2011, making over 73.000 specimens accessible through the GBIF network (http://data.gbif.org/datasets/resource/8105/. At present, 247 families and 8.110 taxa, distributed in angiosperms (93.97%, ferns and fern allies (4.89% and gymnosperms (1.14%, constitute the MGC-Cormof collection. The families and genera best represented in the collection are Compositae, Leguminosae, Gramineae, Labiatae, Caryophyllaceae, Teucrium, Silene, Asplenium, Linaria and Quercus. Most of the specimens are from the Western Mediterranean Region, fundamentally Southern Spain (Andalusia: 82% of specimens and Northern Morocco (2.17%. Approximately, 63% of the specimens are georeferenced. The identification of the specimens in the collection has been carried out by the plant biology department at the University of Malaga and plus 40% of the specimens has been reviewed by experts. The MGC-Cormof dataset has been revised by DarwinTest v3.2 tool (Ortega-Maqueda and Pando 2008 before being published in GBIF. The data included in this database are important for conservation works, taxonomy, flora, cartography, phenology, palynology, among others.El Herbario de la Universidad de Málaga (Herbario MGC está constituido por cuatro colecciones biológicas. La colección de plantas vasculares (MGC Cormof es la

  5. Comparative genomics reveals conservative evolution of the xylem transcriptome in vascular plants.

    Science.gov (United States)

    Li, Xinguo; Wu, Harry X; Southerton, Simon G

    2010-06-21

    Wood is a valuable natural resource and a major carbon sink. Wood formation is an important developmental process in vascular plants which played a crucial role in plant evolution. Although genes involved in xylem formation have been investigated, the molecular mechanisms of xylem evolution are not well understood. We use comparative genomics to examine evolution of the xylem transcriptome to gain insights into xylem evolution. The xylem transcriptome is highly conserved in conifers, but considerably divergent in angiosperms. The functional domains of genes in the xylem transcriptome are moderately to highly conserved in vascular plants, suggesting the existence of a common ancestral xylem transcriptome. Compared to the total transcriptome derived from a range of tissues, the xylem transcriptome is relatively conserved in vascular plants. Of the xylem transcriptome, cell wall genes, ancestral xylem genes, known proteins and transcription factors are relatively more conserved in vascular plants. A total of 527 putative xylem orthologs were identified, which are unevenly distributed across the Arabidopsis chromosomes with eight hot spots observed. Phylogenetic analysis revealed that evolution of the xylem transcriptome has paralleled plant evolution. We also identified 274 conifer-specific xylem unigenes, all of which are of unknown function. These xylem orthologs and conifer-specific unigenes are likely to have played a crucial role in xylem evolution. Conifers have highly conserved xylem transcriptomes, while angiosperm xylem transcriptomes are relatively diversified. Vascular plants share a common ancestral xylem transcriptome. The xylem transcriptomes of vascular plants are more conserved than the total transcriptomes. Evolution of the xylem transcriptome has largely followed the trend of plant evolution.

  6. Use of non vascular plant organisms as indicators of urban air pollution (Tunja, Boyaca, Colombia)

    International Nuclear Information System (INIS)

    Simijaca Salcedo, Diego Fernando; Vargas Rojas, Diana Lucia; Morales Puentes, Maria Eugenia

    2014-01-01

    Lichens and bryophytes are useful organisms in air quality determination. In the city of Tunja (Boyaca, Colombia), is evident the lack of green areas by the increase of building, which contributes to the detriment of the atmospheric purity making unhealthy conditions to the citizens and habitats and population reduction of cryptogamic plants. Using the index of atmospheric purity (IAP) we identified the greater influence air pollutants areas. Parmotrema austrosinense has the highest frequency; and the normal femenina station with an IAP of 52,2196 is an atmospheric pollutants influenced area; Parque Santander and semaforos, are the most contaminated (IAP 8,5333) with only two species (Heterodermia albicans and Lobariaceae sp.). We highlight the evaluation in the reserva forestal protectora el Malmo with an IAP of 34,0281 and 23 species. IAP values were grouped in isocontamination areas to be represented cartographically. The use of bioindicators organisms is a natural and economic strategy allowing us to mapping urban areas and makes revegetation cities designs, generating the contaminants diminution air impact improving the citizen's life quality.

  7. The Root-Associated Microbial Community of the World’s Highest Growing Vascular Plants

    Czech Academy of Sciences Publication Activity Database

    Angel, R.; Conrad, R.; Dvorský, Miroslav; Kopecký, Martin; Kotilínek, M.; Hiiesalu, Inga; Schweingruber, F. H.; Doležal, Jiří

    2016-01-01

    Roč. 72, č. 2 (2016), s. 394-406 ISSN 0095-3628 Institutional support: RVO:67985939 Keywords : vascular plants * upward migration * subnival soil * plant-associated bacteria Subject RIV: EF - Botanics Impact factor: 3.630, year: 2016

  8. New insights on the evolution of Leafy cotyledon1 (LEC1) type genes in vascular plants.

    Science.gov (United States)

    Cagliari, Alexandro; Turchetto-Zolet, Andreia Carina; Korbes, Ana Paula; Maraschin, Felipe Dos Santos; Margis, Rogerio; Margis-Pinheiro, Marcia

    2014-01-01

    NF-Y is a conserved oligomeric transcription factor found in all eukaryotes. In plants, this regulator evolved with a broad diversification of the genes coding for its three subunits (NF-YA, NF-YB and NF-YC). The NF-YB members can be divided into Leafy Cotyledon1 (LEC1) and non-LEC1 types. Here we presented a comparative genomic study using phylogenetic analyses to validate an evolutionary model for the origin of LEC-type genes in plants and their emergence from non-LEC1-type genes. We identified LEC1-type members in all vascular plant genomes, but not in amoebozoa, algae, fungi, metazoa and non-vascular plant representatives, which present exclusively non-LEC1-type genes as constituents of their NF-YB subunits. The non-synonymous to synonymous nucleotide substitution rates (Ka/Ks) between LEC1 and non-LEC1-type genes indicate the presence of positive selection acting on LEC1-type members to the fixation of LEC1-specific amino acid residues. The phylogenetic analyses demonstrated that plant LEC1-type genes are evolutionary divergent from the non-LEC1-type genes of plants, fungi, amoebozoa, algae and animals. Our results point to a scenario in which LEC1-type genes have originated in vascular plants after gene expansion in plants. We suggest that processes of neofunctionalization and/or subfunctionalization were responsible for the emergence of a versatile role for LEC1-type genes in vascular plants, especially in seed plants. LEC1-type genes besides being phylogenetic divergent also present different expression profile when compared with non-LEC1-type genes. Altogether, our data provide new insights about the LEC1 and non-LEC1 evolutionary relationship during the vascular plant evolution. Copyright © 2014 Elsevier Inc. All rights reserved.

  9. Structural evolution of the 4/1 genes and proteins in non-vascular and lower vascular plants.

    Science.gov (United States)

    Morozov, Sergey Y; Milyutina, Irina A; Bobrova, Vera K; Ryazantsev, Dmitry Y; Erokhina, Tatiana N; Zavriev, Sergey K; Agranovsky, Alexey A; Solovyev, Andrey G; Troitsky, Alexey V

    2015-12-01

    The 4/1 protein of unknown function is encoded by a single-copy gene in most higher plants. The 4/1 protein of Nicotiana tabacum (Nt-4/1 protein) has been shown to be alpha-helical and predominantly expressed in conductive tissues. Here, we report the analysis of 4/1 genes and the encoded proteins of lower land plants. Sequences of a number of 4/1 genes from liverworts, lycophytes, ferns and gymnosperms were determined and analyzed together with sequences available in databases. Most of the vascular plants were found to encode Magnoliophyta-like 4/1 proteins exhibiting previously described gene structure and protein properties. Identification of the 4/1-like proteins in hornworts, liverworts and charophyte algae (sister lineage to all land plants) but not in mosses suggests that 4/1 proteins are likely important for plant development but not required for a primary metabolic function of plant cell. Copyright © 2015 Elsevier B.V. and Société Française de Biochimie et Biologie Moléculaire (SFBBM). All rights reserved.

  10. Mapping and Quantification of Vascular Branching in Plants, Animals and Humans by VESGEN Software

    Science.gov (United States)

    Parsons-Wingerter, P. A.; Vickerman, M. B.; Keith, P. A.

    2010-01-01

    Humans face daunting challenges in the successful exploration and colonization of space, including adverse alterations in gravity and radiation. The Earth-determined biology of plants, animals and humans is significantly modified in such extraterrestrial environments. One physiological requirement shared by larger plants and animals with humans is a complex, highly branching vascular system that is dynamically responsive to cellular metabolism, immunological protection and specialized cellular/tissue function. VESsel GENeration (VESGEN) Analysis has been developed as a mature beta version, pre-release research software for mapping and quantification of the fractal-based complexity of vascular branching. Alterations in vascular branching pattern can provide informative read-outs of altered vascular regulation. Originally developed for biomedical applications in angiogenesis, VESGEN 2D has provided novel insights into the cytokine, transgenic and therapeutic regulation of angiogenesis, lymphangiogenesis and other microvascular remodeling phenomena. Vascular trees, networks and tree-network composites are mapped and quantified. Applications include disease progression from clinical ophthalmic images of the human retina; experimental regulation of vascular remodeling in the mouse retina; avian and mouse coronary vasculature, and other experimental models in vivo. We envision that altered branching in the leaves of plants studied on ISS such as Arabidopsis thaliana cans also be analyzed.

  11. Alkalinity and trophic state regulate aquatic plant distribution in Danish lakes

    DEFF Research Database (Denmark)

    Vestergaard, Ole Skafte; Sand-Jensen, Kaj

    2000-01-01

    distinct differences in the distribution of species and growth forms among the lakes. The lakes separated into five groups of characteristic species compositions. Alkalinity was the main factor responsible for the species distribution. Lakes of high alkalinity were dominated by vascular plants...... of the elodeid growth form, lakes of intermediate alkalinity contained a variety of elodeids and vascular plants of the isoetid growth form, while lakes of low alkalinity and low pH had several isoetids and bryophytes, but very few elodeids. Alkalinity is a close descriptor of the bicarbonate concentration...

  12. Flora of vascular plants of selected Poznań cemeteries

    Directory of Open Access Journals (Sweden)

    Aneta Czarna

    2012-12-01

    Full Text Available The presence of 395 species of vascular flora at four rarely used cemeteries within the Poznań city was confirmed in 2010. Apart from naturally occurring species, cultivated species were noted equally. Among species appearing spontaneously between the graves, species new for the flora of Poland: Chionodoxa forbesii, Ch. luciliae, Puschkinia scilloides, new for the flora of Wielkopolska: Bidens ferulifolius, Hyacinthoides hispanica and new for the flora of Poznań: Erigeron ramosus, Lilium bulbiferum, Pimpinella nigra, Poa subcaerulea, Veronica hederifolia s.s., were recorded. Names of taxa originating from cultivation are underlined.

  13. Vascular plant-mediated controls on atmospheric carbon assimilation and peat carbon decomposition under climate change.

    Science.gov (United States)

    Gavazov, Konstantin; Albrecht, Remy; Buttler, Alexandre; Dorrepaal, Ellen; Garnett, Mark H; Gogo, Sebastien; Hagedorn, Frank; Mills, Robert T E; Robroek, Bjorn J M; Bragazza, Luca

    2018-03-23

    Climate change can alter peatland plant community composition by promoting the growth of vascular plants. How such vegetation change affects peatland carbon dynamics remains, however, unclear. In order to assess the effect of vegetation change on carbon uptake and release, we performed a vascular plant-removal experiment in two Sphagnum-dominated peatlands that represent contrasting stages of natural vegetation succession along a climatic gradient. Periodic measurements of net ecosystem CO 2 exchange revealed that vascular plants play a crucial role in assuring the potential for net carbon uptake, particularly with a warmer climate. The presence of vascular plants, however, also increased ecosystem respiration, and by using the seasonal variation of respired CO 2 radiocarbon (bomb- 14 C) signature we demonstrate an enhanced heterotrophic decomposition of peat carbon due to rhizosphere priming. The observed rhizosphere priming of peat carbon decomposition was matched by more advanced humification of dissolved organic matter, which remained apparent beyond the plant growing season. Our results underline the relevance of rhizosphere priming in peatlands, especially when assessing the future carbon sink function of peatlands undergoing a shift in vegetation community composition in association with climate change. © 2018 John Wiley & Sons Ltd.

  14. [Diversity and distribution of the threatened medicinal vascular plants in Lancang].

    Science.gov (United States)

    Chi, Xiu-Lian; Yuan, Yi-Kai; Fang, Bo; Zhang, Xiao-Bo; Yang, Han-Yu; Zhao, Zhi-Ping; Li, Guo; Fu, Kai-Cong; Guo, Lan-Ping; Huang, Lu-Qi

    2017-11-01

    The rich diversity in medicinal plants provides an important material basic for the development of Traditional Chinese medicine in China. It is important to explore the present situation of medicinal plants within special regions in order to provide scientific instructions for their sustainable protection and exploitation and utilization. In this study, we carried out the field survey according to the guideline of national survey of Chinese material medica resources and the guideline of plant species diversity survey and estimation at county level with the line transect method. With the field surveyed data, we explored the diversity and distribution of the threatened medicinal vascular plants in Lancang. We found that there were 33 species of the threatened medicinal vascular plants in this county. These species were from 23 genera and 17 families, and were composed of one critical endangered, 10 endangered and 22 vulnerable species. They were widely distributed across the whole county and were most concentrated in the town of Nuozhadu, Fazhanhe, Nuofu and Zhutang, which were located in the southeastern, southwestern and western of Lancang, respectively. We also found that the plant species richness followed a unimodal pattern along elevation. In addition, we found that the areas of Nuozhadu Nature Reserve in Lancang only covered six threatened medicinal vascular plants, while most of the regions with high species richness were not well protected. Therefore, we proposed to make more efforts to improve the protection measurements in order to better protect and utilize the medicinal plants in Lancang. Copyright© by the Chinese Pharmaceutical Association.

  15. Projected range contractions of European protected oceanic montane plant communities: focus on climate change impacts is essential for their future conservation.

    Science.gov (United States)

    Hodd, Rory L; Bourke, David; Skeffington, Micheline Sheehy

    2014-01-01

    Global climate is rapidly changing and while many studies have investigated the potential impacts of this on the distribution of montane plant species and communities, few have focused on those with oceanic montane affinities. In Europe, highly sensitive bryophyte species reach their optimum occurrence, highest diversity and abundance in the north-west hyperoceanic regions, while a number of montane vascular plant species occur here at the edge of their range. This study evaluates the potential impact of climate change on the distribution of these species and assesses the implications for EU Habitats Directive-protected oceanic montane plant communities. We applied an ensemble of species distribution modelling techniques, using atlas data of 30 vascular plant and bryophyte species, to calculate range changes under projected future climate change. The future effectiveness of the protected area network to conserve these species was evaluated using gap analysis. We found that the majority of these montane species are projected to lose suitable climate space, primarily at lower altitudes, or that areas of suitable climate will principally shift northwards. In particular, rare oceanic montane bryophytes have poor dispersal capacity and are likely to be especially vulnerable to contractions in their current climate space. Significantly different projected range change responses were found between 1) oceanic montane bryophytes and vascular plants; 2) species belonging to different montane plant communities; 3) species categorised according to different biomes and eastern limit classifications. The inclusion of topographical variables in addition to climate, significantly improved the statistical and spatial performance of models. The current protected area network is projected to become less effective, especially for specialised arctic-montane species, posing a challenge to conserving oceanic montane plant communities. Conservation management plans need significantly

  16. Projected range contractions of European protected oceanic montane plant communities: focus on climate change impacts is essential for their future conservation.

    Directory of Open Access Journals (Sweden)

    Rory L Hodd

    Full Text Available Global climate is rapidly changing and while many studies have investigated the potential impacts of this on the distribution of montane plant species and communities, few have focused on those with oceanic montane affinities. In Europe, highly sensitive bryophyte species reach their optimum occurrence, highest diversity and abundance in the north-west hyperoceanic regions, while a number of montane vascular plant species occur here at the edge of their range. This study evaluates the potential impact of climate change on the distribution of these species and assesses the implications for EU Habitats Directive-protected oceanic montane plant communities. We applied an ensemble of species distribution modelling techniques, using atlas data of 30 vascular plant and bryophyte species, to calculate range changes under projected future climate change. The future effectiveness of the protected area network to conserve these species was evaluated using gap analysis. We found that the majority of these montane species are projected to lose suitable climate space, primarily at lower altitudes, or that areas of suitable climate will principally shift northwards. In particular, rare oceanic montane bryophytes have poor dispersal capacity and are likely to be especially vulnerable to contractions in their current climate space. Significantly different projected range change responses were found between 1 oceanic montane bryophytes and vascular plants; 2 species belonging to different montane plant communities; 3 species categorised according to different biomes and eastern limit classifications. The inclusion of topographical variables in addition to climate, significantly improved the statistical and spatial performance of models. The current protected area network is projected to become less effective, especially for specialised arctic-montane species, posing a challenge to conserving oceanic montane plant communities. Conservation management plans need

  17. Use of gold nanoparticles to detect water uptake in vascular plants.

    Science.gov (United States)

    Hwang, Bae Geun; Ahn, Sungsook; Lee, Sang Joon

    2014-01-01

    Direct visualization of water-conducting pathways and sap flows in xylem vessels is important for understanding the physiology of vascular plants and their sap ascent. Gold nanoparticles (AuNPs) combined with synchrotron X-ray imaging technique is a new promising tool for investigating plant hydraulics in opaque xylem vessels of vascular plants. However, in practical applications of AuNPs for real-time quantitative visualization of sap flows, their interaction with a vascular network needs to be verified in advance. In this study, the effect of AuNPs on the water-refilling function of xylem vessels is experimentally investigated with three monocot species. Discrepancy in the water uptakes starts to appear at about 20 min to 40 min after the supply of AuNP solution to the test plant by the possible gradual accumulation of AuNPs on the internal structures of vasculature. However conclusively, it is observed that the water-refilling speeds in individual xylem vessels are virtually unaffected by hydrophilically surface-modified AuNPs (diameter ∼20 nm). Therefore, the AuNPs can be effectively used as flow tracers in the xylem vessels in the first 20∼30 min without any physiological barrier. As a result, AuNPs are found to be useful for visualizing various fluid dynamic phenomena occurring in vascular plants.

  18. Foliar uptake of zinc by vascular plants. Radiometric study

    International Nuclear Information System (INIS)

    Maresova, J.; Remenarova, L.; Hornik, M.; Pipiska, M.; Augustin, J.; Lesny, J.

    2012-01-01

    The aim of this paper was to obtain quantitative data of foliar uptake kinetics and long distance transport of zinc in tobacco (Nicotiana tabacum L.) and hop (Humulus lupulus L.) plants. Zinc was used as a model of microelement and toxic metal, tobacco and hop as a representatives of agriculturally important plants. A tip of leaf blade was immersed in the solution spiked with 65 ZnCl 2 and foliar uptake and translocation to other parts of the plant grown in nutrient solution was measured by gamma-spectrometry and autoradiography. We found that foliar zinc uptake by both plants is dependent on the initial metal concentration within the range C 0 = 10-100 μmol dm -3 ZnCl 2 . Zinc is immobilized mainly in immersed part of the contact leaf and only 0 = 0.1 mmol dm -3 ZnCl 2 concentrations >2.5 mg/g Zn and 4.8 mg/g Zn (dry wt.) in immersed part of tobacco and hop leaf plant, respectively were found after 5 days of exposure. Low mobility of zinc entering the plant via the leaf surface can be attributed to the immobilization of zinc into Zn-ligand complexes with high stability constants log K at pH 6.0-8.0, such as the reaction products of Zn 2+ ions with citric acid, histidine or phosphates. Zinc can be extracted from dried leaves by the solutions of inorganic salts, carboxylic acids, amino acids and synthetic complexing ligands such as EDTA. Anionic (SDS) and non-ionic (Tween 40) surfactants causes the decrease of the Zn foliar uptake, but not translocation of Zn from the contact leaf area. Obtained data are discussed from the point of view of possible limited efficiency of liquid formulations designed for practical applications as Zn foliar fertilizers. (author)

  19. Invasive vascular plant species of limnocrenic karst springs in Poland

    Science.gov (United States)

    Spałek, Krzysztof

    2015-04-01

    Natural water reservoirs are very valuable floristic sites in Poland. Among them, the most important for preservation of biodiversity of flora are limnocrenic karst springs. The long-term process of human pressure on habitats of this type caused disturbance of their biological balance. Changes in the water regime, industrial development and chemisation of agriculture, especially in the period of last two hundred years, led to systematic disappearance of localities of many plant species connected with rare habitats and also to appear numerous invasive plant species. They are: Acorus calamus, Echinocystis lobata, Elodea canadensis, Erechtites hieraciifolia, Impatiens glandulifera, Solidago canadensis, S. gigantea and S. graminifolia. Fielworks were conducted in 2010-2014.

  20. Database of Vascular Plants of Canada (VASCAN): a community contributed taxonomic checklist of all vascular plants of Canada, Saint Pierre and Miquelon, and Greenland.

    Science.gov (United States)

    Desmet, Peter; Brouillet, Luc

    2013-01-01

    The Database of Vascular Plants of Canada or VASCAN (http://data.canadensys.net/vascan) is a comprehensive and curated checklist of all vascular plants reported in Canada, Greenland (Denmark), and Saint Pierre and Miquelon (France). VASCAN was developed at the Université de Montréal Biodiversity Centre and is maintained by a group of editors and contributors. For every core taxon in the checklist (species, subspecies, or variety), VASCAN provides the accepted scientific name, the accepted French and English vernacular names, and their synonyms/alternatives in Canada, as well as the distribution status (native, introduced, ephemeral, excluded, extirpated, doubtful or absent) of the plant for each province or territory, and the habit (tree, shrub, herb and/or vine) of the plant in Canada. For reported hybrids (nothotaxa or hybrid formulas) VASCAN also provides the hybrid parents, except if the parents of the hybrid do not occur in Canada. All taxa are linked to a classification. VASCAN refers to a source for all name, classification and distribution information. All data have been released to the public domain under a CC0 waiver and are available through Canadensys and the Global Biodiversity Information Facility (GBIF). VASCAN is a service to the scientific community and the general public, including administrations, companies, and non-governmental organizations.

  1. THE DISTRIBUTION AND SPREAD OF ALIEN VASCULAR PLANTS ...

    African Journals Online (AJOL)

    Surveys of alien plants at subantarctic Prince Edward Island in 2001 show that the ranges of all three introduced species have increased since the last survey in 1998. Poa annua, the longest-established species, increased its range substantially after 1987, prior to which it was confined to a single site for more than 20 years ...

  2. Distributions of vascular plants in the Czech Republic. Part 4

    Czech Academy of Sciences Publication Activity Database

    Kaplan, Zdeněk; Danihelka, Jiří; Koutecký, P.; Šumberová, Kateřina; Ekrt, L.; Grulich, V.; Řepka, R.; Hroudová, Zdenka; Štěpánková, Jitka; Dvořák, V.; Dančák, M.; Dřevojan, P.; Wild, Jan

    2017-01-01

    Roč. 89, č. 2 (2017), s. 115-201 ISSN 0032-7786 R&D Projects: GA ČR GB14-36079G Institutional support: RVO:67985939 Keywords : distribution * maps * phytogeography Subject RIV: EF - Botanics OBOR OECD: Plant sciences, botany Impact factor: 3.000, year: 2016

  3. Vascular plant diversity and community Structure of nandi forests ...

    African Journals Online (AJOL)

    Abundance data of species was used for species diversity, similarity, species richness estimation and plant community analysis. PC-ORD, CANOCO and EstimateS were used to analyze the data. A total of 321 species ... Keywords: floristic composition, ordination, rarefaction, species accumulation, species richness.

  4. Distributions of vascular plants in the Czech Republic. Part 5

    Czech Academy of Sciences Publication Activity Database

    Kaplan, Zdeněk; Danihelka, Jiří; Šumberová, Kateřina; Chrtek, Jindřich; Rotreklová, O.; Ekrt, L.; Štěpánková, Jitka; Taraška, V.; Trávníček, B.; Prančl, Jan; Ducháček, M.; Hroneš, M.; Kobrlová, L.; Horák, D.; Wild, Jan

    2017-01-01

    Roč. 89, č. 4 (2017), s. 333-439 ISSN 0032-7786 R&D Projects: GA ČR GB14-36079G Institutional support: RVO:67985939 Keywords : distribution * maps * phytogeography Subject RIV: EF - Botanics OBOR OECD: Plant sciences, botany Impact factor: 3.000, year: 2016

  5. Short history of the Phytography of Malaysian vascular plants

    NARCIS (Netherlands)

    Wit, de H.C.D.

    1948-01-01

    For various reasons the space occupied by pre-Linnean Malaysian phytography in this concise history seems too large and out of proportion in comparison to the survey of post-Linnean work. Modern plant description, though based on, and derived from, ancient beginnings and traditions, maintains but

  6. Comparative Genomics Yields Insights into Niche Adaptation of Plant Vascular Wilt Pathogens

    NARCIS (Netherlands)

    Klosterman, S.J.; Subbarao, K.V.; Kang, S.; Veronese, P.; Gold, S.E.; Thomma, B.P.H.J.; Chen, Z.J.; Henrissat, B.; Lee, Y.H.; Park, J.; Garcia-Pedrajas, M.D.; Barbara, D.J.; Anchieta, A.; Jonge, de R.; Santhanam, P.; Maruthachalam, K.; Atallah, Z.; Amyotte, S.G.; Paz, Z.; Inderbitzin, P.; Hayes, R.J.; Heiman, D.I.; Young, S.; Zeng, Q.; Engels, R.; Galagan, J.; Cuomo, C.; Dobinson, K.F.; Ma, L.J.

    2011-01-01

    The vascular wilt fungi Verticillium dahliae and V. albo-atrum infect over 200 plant species, causing billions of dollars in annual crop losses. The characteristic wilt symptoms are a result of colonization and proliferation of the pathogens in the xylem vessels, which undergo fluctuations in

  7. Sphagnum modifies climate-change impacts on subarctic vascular bog plants.

    NARCIS (Netherlands)

    Dorrepaal, E.; Aerts, R.; Cornelissen, J.H.C.; van Logtestijn, R.S.P; Callaghan, T.V.

    2006-01-01

    1. Vascular plant growth forms in northern peatlands differ in their strategies to cope with the harsh climate, low nutrient availability and progressively increasing height of the Sphagnum carpet in which they grow. Climate change may therefore affect growth forms differentially, both directly and

  8. New records of alien vascular plants from Marion and Prince Edward Islands, sub-Antarctic

    NARCIS (Netherlands)

    Gremmen, N.J.M.; Smith, V.

    1999-01-01

    A survey was made of the distribution of introduced vascular plants on Marion and Prince Edward Islands. The results of this survey were compared to results of previous surveys (1965/66, 1975, 1981, 1989). Four new introductions to Marion Island have taken place, three of which involved species that

  9. Interactions between soil phototrophs and vascular plants in Himalayan cold deserts

    Czech Academy of Sciences Publication Activity Database

    Řeháková, Klára; Čapková, Kateřina; Dvorský, Miroslav; Kopecký, Martin; Altman, Jan; Šmilauer, P.; Doležal, Jiří

    2017-01-01

    Roč. 115, dec 2017 (2017), s. 568-578 ISSN 0038-0717 R&D Projects: GA ČR GA13-13368S Institutional support: RVO:67985939 Keywords : microbial communities * vascular plants * interactions Subject RIV: EH - Ecology, Behaviour OBOR OECD: Ecology Impact factor: 4.857, year: 2016

  10. Species diversity of vascular plants in Si Phang-nga National Park, Phangnga Province

    Directory of Open Access Journals (Sweden)

    Leeratiwong, C.

    2005-07-01

    Full Text Available A survey of the vascular plants in Si Phang-nga National Park, Phangnga Province, was conducted from September 2002 to August 2003. Five hundred and forty three species of 287 genera and 111 families were collected. The most diverse family was Rubiaceae, 53 species. Four species of these collected plants are endemic to Thailand, Argostemma lobulatum, Aristolochia helix, Crinum thaianum and Mallotus hymenophyllus and three species, Hedyotis hedyotidea, Lipocarpha microcephala and Pterolobium intergum are newly recorded for southern Thailand.

  11. Patterns of species diversity and phylogenetic structure of vascular plants on the Qinghai-Tibetan Plateau.

    Science.gov (United States)

    Yan, Yujing; Yang, Xian; Tang, Zhiyao

    2013-11-01

    Large-scale patterns of species richness and the underlying mechanisms regulating these patterns have long been the central issues in biogeography and macroecology. Phylogenetic community structure is a result of combined effects of contemporary ecological interactions, environmental filtering, and evolutionary history, and it links community ecology with biogeography and trait evolution. The Qinghai-Tibetan Plateau provides a good opportunity to test the influence of contemporary climate on shaping species richness because of its unique geological history, cold climate, and high biodiversity. In this study, based on high-resolution distributions of ˜9000 vascular plant species, we explored how species richness and phylogenetic structure of vascular plants correlate with climates on the highest (and species rich) plateau on the Earth. The results showed that most of the vascular plants were distributed on the eastern part of the plateau; there was a strong association between species richness and climate, even after the effects of habitat heterogeneity were controlled. However, the responses of richness to climate remarkably depended on life-forms. Richness of woody plants showed stronger climatic associations than that of herbaceous plants; energy and water availability together regulated richness pattern of woody plants; whereas water availability predominantly regulated richness pattern of herbaceous plants. The phylogenetic structure of vascular species clustered in most areas of the plateau, suggesting that rapid speciation and environment filtering dominated the assembly of communities on the plateau. We further propose that biodiversity conservation in this area should better take into account ecological features for different life-forms and phylogenetic lineages.

  12. Disjunct populations of European vascular plant species keep the same climatic niches

    DEFF Research Database (Denmark)

    Wasof, Safaa; Lenoir, Jonathan; Aarrestad, Per Arild

    2015-01-01

    separated for thousands of years. Location: European Alps and Fennoscandia. Methods: Of the studied pool of 888 terrestrial vascular plant species occurring in both the Alps and Fennoscandia, we used two complementary approaches to test and quantify climatic-niche shifts for 31 species having strictly......Aim: Previous research on how climatic niches vary across species ranges has focused on a limited number of species, mostly invasive, and has not, to date, been very conclusive. Here we assess the degree of niche conservatism between distant populations of native alpine plant species that have been...... to be largely valid for arctic-alpine plants....

  13. Vascular plants of the Nevada Test Site and Central-Southern Nevada: ecologic and geographic distributions

    Energy Technology Data Exchange (ETDEWEB)

    Beatley, J.C.

    1976-01-01

    The physical environment of the Nevada Test Site and surrounding area is described with regard to physiography, geology, soils, and climate. A discussion of plant associations is given for the Mojave Desert, Transition Desert, and Great Basin Desert. The vegetation of disturbed sites is discussed with regard to introduced species as well as endangered and threatened species. Collections of vascular plants were made during 1959 to 1975. The plants, belonging to 1093 taxa and 98 families are listed together with information concerning ecologic and geographic distributions. Indexes to families, genera, and species are included. (HLW)

  14. Further studies on the effect of sulphur dioxide on lichens and bryophytes

    Energy Technology Data Exchange (ETDEWEB)

    Gilbert, O L

    1970-01-01

    After comparing sixteen aspects of their biology it is clear that despite wide differences in botanical affinity bryophytes and lichens are outstandingly similar in their response to SO/sub 2/. This suggests that these lower plants can only colonize inhospitable habitats by adaptations which carry with them an inherent susceptibility to air pollution. Extensive laboratory and field work has emphasized the controlling influence of habitat on the survival of species. Among the strongest modifying influences are shelter, the pH, and buffer capacity of the substratum. Water relations were found to have little effect. The extreme sensitivity of most epiphytes and the problems raised by resistant species are discussed.

  15. Bryophytes from Simeonof Island in the Shumagin Islands, southwestern Alaska

    Science.gov (United States)

    Schofield, W.B.; Talbot, S. S.; Talbot, S.L.

    2004-01-01

    Simeonof Island is located south of the Alaska Peninsula in the hyperoceanic sector of the middle boreal subzone. We examined the bryoflora of Simeonof Island to determine species composition in an area where no previous collections had been reported. This field study was conducted in sites selected to represent the spectrum of environmental variation within Simeonof Island. Data were analyzed using published reports to compare bryophyte distribution patterns at three levels, the Northern Hemisphere, North America, and Alaska. A total of 271 bryophytes were identified: 202 mosses and 69 liverworts. The annotated list of species for Simeonof Island expands the known range for many species and fills distribution gaps within Hulte??n's Western Pacific Coast district. Maps and notes on the distribution of 14 significant distribution records are presented. Compared with bryophyte distribution in the Northern Hemisphere, the bryoflora of Simeonof Island primarily includes taxa of boreal (55%), temperate (20%), arctic (10%), and cosmopolitan (8%) distribution; 6% of the moss flora are western North America endemics. A description of the bryophytes present in the vegetation and habitat types is provided as is a quantitative analysis of the most frequently occurring bryophytes in crowberry heath.

  16. Vasorelaxation induced by common edible tropical plant extracts in isolated rat aorta and mesenteric vascular bed.

    Science.gov (United States)

    Runnie, I; Salleh, M N; Mohamed, S; Head, R J; Abeywardena, M Y

    2004-06-01

    In this study, the vasodilatory actions of nine edible tropical plant extracts were investigated. Ipomoea batatas (sweet potato leaf), Piper betle (betel leaf), Anacardium occidentale (cashew leaf), Gynandropsis gynandra (maman leaf), Carica papaya (papaya leaf), and Mentha arvensis (mint leaf) extracts exhibited more than 50% relaxing effect on aortic ring preparations, while Piper betle and Cymbopogon citratus (lemongrass stalk) showed comparable vasorelaxation on isolated perfused mesenteric artery preparation. The vascular effect on the aortic ring preparations were mainly endothelium-dependent, and mediated by nitric oxide (NO) as supported by the inhibition of action in the presence of N(omega)-nitro-L-arginine (NOLA), an nitric oxide synthase (NOS) inhibitor, or by the removal of endothelium. In contrast, vasodilatory actions in resistance vessels (perfused mesenteric vascular beds) appear to involve several biochemical mediators, including NO, prostanoids, and endothelium-dependent hyperpolarizing factors (EDHFs). Total phenolic contents and antioxidant capacities varied among different extracts and found to be independent of vascular relaxation effects. This study demonstrates that many edible plants common in Asian diets to possess potential health benefits, affording protection at the vascular endothelium level.

  17. Bryophyte diversity patterns in flooded and tierra firme forests in the Araracuara Region, Colombian Amazonia

    OpenAIRE

    Benavides, Juan C.; Idarraga, Alvaro; Alvarez, Esteban

    2004-01-01

    We investigated patterns of bryophyte species richness and composition in two forest types of Colombian Amazonia, non-flooded tierra firme forest and floodplain forest of the Caquetá River. A total of 109 bryophyte species were recorded from 14 0.2 ha plots. Bryophyte life forms and habitats were analyzed, including the canopy and epiphylls. Bryophyte species did not show significant differences between landscapes but mosses and liverworts were different and with opposite responses balancing ...

  18. The study of distribution characteristics of vascular and naturalized plants in Dokdo, South Korea

    Directory of Open Access Journals (Sweden)

    Su-Young Jung

    2014-06-01

    Full Text Available This study was performed to investigate the distribution of vascular plants and the characteristics of naturalized plants in Dokdo Island, South Korea. The survey was conducted a total of 5 times from June 2012 to September 2013. The number of plants confirmed in this study was 60 taxa in total: 29 families, 49 genera, 55 species, 2 subspecies and 3 varieties. To classify them by regional groups, 53 taxa were confirmed in the Dongdo and 38 taxa were confirmed in the Seodo. Among them, the distribution of Stellaria neglecta Weihe and Puccinellia nipponica Ohwi was first discovered in this study. The naturalized plants distributed in Dokdo was 7 taxa: Chenopodium album L., Sonchus asper (L. Hill, Sonchus oleraceus L., Ipomoea purpurea Roth, Brassica juncea (L. Czern., etc. Overall, concerns over the naturalized plants in Dokdo are high regardless of the scale of their distribution and the appearance frequency.

  19. Microbial community dynamics and transformation of vascular plant detritus in two wetland ecosystems

    International Nuclear Information System (INIS)

    Moran, M.A.

    1987-01-01

    The microbial ecology of two wetland ecosystems in southeastern Georgia, USA, was studied with respect to microbial community dynamics and microbially-mediated transformations of vascular plant detritus. In the Okefenokee Swamp, biomass of microorganisms in the water column and sediments was generally lower in winter months and higher during spring and summer. Biomass and activity (measured as 14 C-lignocellulose mineralization) differed significantly among five habitats within the Okefenokee, and also among locations within each habitat. Significant heterogeneity in the structure of Okefenokee microbial communities was found at scales from 30 cm to 150 m. In field and laboratory studies of vascular plant decomposition in the Okefenokee and a salt marsh on Sapelo Island, the mathematical model which best describes decomposition kinetics is the decaying coefficient model

  20. Challenges in tracing the fate and effects of atmospheric polycyclic aromatic hydrocarbon deposition in vascular plants.

    Science.gov (United States)

    Desalme, Dorine; Binet, Philippe; Chiapusio, Geneviève

    2013-05-07

    Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous organic pollutants that raise environmental concerns because of their toxicity. Their accumulation in vascular plants conditions harmful consequences to human health because of their position in the food chain. Consequently, understanding how atmospheric PAHs are taken up in plant tissues is crucial for risk assessment. In this review we synthesize current knowledge about PAH atmospheric deposition, accumulation in both gymnosperms and angiosperms, mechanisms of transfer, and ecological and physiological effects. PAHs emitted in the atmosphere partition between gas and particulate phases and undergo atmospheric deposition on shoots and soil. Most PAH concentration data from vascular plant leaves suggest that contamination occurs by both direct (air-leaf) and indirect (air-soil-root) pathways. Experimental studies demonstrate that PAHs affect plant growth, interfering with plant carbon allocation and root symbioses. Photosynthesis remains the most studied physiological process affected by PAHs. Among scientific challenges, identifying specific physiological transfer mechanisms and improving the understanding of plant-symbiont interactions in relation to PAH pollution remain pivotal for both fundamental and applied environmental sciences.

  1. The Heavy Links between Geological Events and Vascular Plants Evolution: A Brief Outline.

    Science.gov (United States)

    Piombino, Aldo

    2016-01-01

    Since the rise of photosynthesis, life has influenced terrestrial atmosphere, particularly the O2 and the CO2 content (the latter being originally more than 95%), changing the chemistry of waters, atmosphere, and soils. Billions of years after, a far offspring of these first unicellular forms conquered emerging lands, not only completely changing landscape, but also modifying geological cycles of deposition and erosion, many chemical and physical characteristics of soils and fresh waters, and, more, the cycle of various elements. So, there are no doubts that vascular plants modified geology; but it is true that also geology has affected (and, more, has driven) plant evolution. New software, PyRate, has determined vascular plant origin and diversification through a Bayesian analysis of fossil record from Silurian to today, particularly observing their origination and extinction rate. A comparison between PyRate data and geological history suggests that geological events massively influenced plant evolution and that also the rise of nonflowering seed plants and the fast diffusion of flowering plants can be explained, almost partly, with the environmental condition changes induced by geological phenomena.

  2. Rhynchostegium megapolitanum (Web. et Mohr) B.S.G.-A rare bryophyte in dune ecosystems of Zealand, Denmark

    DEFF Research Database (Denmark)

    Johnsen, Ib

    2014-01-01

    Rhynchostegium megapolitanum was observed during a study of the effects of the invasive non-native Rosa rugosa in a sand dune. The vascular as well as the epiphytic and epigeic cryptogam vegetation was recorded., and soil properties were measured. Epihytic lichens were abundant on dead or dying b...... branches of Rosa rugosa scrubs, under which the stable substrate and high light exposure provided growth conditions for an epigeic community dominated by lichens and bryophytes. The occurrence of the rare bryophyte Rhynchostegium megapolitanum is discussed......Rhynchostegium megapolitanum was observed during a study of the effects of the invasive non-native Rosa rugosa in a sand dune. The vascular as well as the epiphytic and epigeic cryptogam vegetation was recorded., and soil properties were measured. Epihytic lichens were abundant on dead or dying...

  3. Bryophytes of beach forests in Chon Buri Province, Thailand

    Directory of Open Access Journals (Sweden)

    Phiangphak Sukkharak

    2014-10-01

    Full Text Available An investigation of bryophyte diversity of three beach forests including Had Tung Prong, Had Tein Talay, and the beach forest in Thai Island and Sea Natural History Museum in Chon Buri Province, Thailand, was carried out. From 137 enumerated specimens, 16 species (6 mosses, 10 liverworts in 12 genera (5 mosses, 7 liverworts and eight families (5 mosses, 3 liverworts were found. Among those the most common families of mosses are Fissidentaceae (2 species and the most common families of liverwort are Lejeuneaceae (8 species. A comparison of species richness among the three areas revealed that the highest species richness of bryophytes was found in Had Tung Prong. Moreover, of all bryophyte species found, Weissia edentula Mitt. was the most common one.

  4. Application of vascular aquatic plants for pollution removal, energy and food production in a biological system

    Science.gov (United States)

    Wolverton, B. C.; Barlow, R. M.; Mcdonald, R. C.

    1975-01-01

    Vascular aquatic plants such as water hyacinths (Eichhornia crassipes) (Mart.) Solms and alligator weeds (Alternanthera philoxeroides) (Mart.) Griesb., when utilized in a controlled biological system (including a regular program of harvesting to achieve maximum growth and pollution removal efficiency), may represent a remarkably efficient and inexpensive filtration and disposal system for toxic materials and sewage released into waters near urban and industrial areas. The harvested and processed plant materials are sources of energy, fertilizer, animal feed, and human food. Such a system has industrial, municipal, and agricultural applications.

  5. Origins of native vascular plants of Antarctica: comments from a historical phytogeography viewpoint.

    Science.gov (United States)

    Mosyakin, S L; Bezusko, L G; Mosyakin, A S

    2007-01-01

    The article provides an overview of the problem of origin of the only native vascular plants of Antarctica, Deschampsia antartica (Poaceae) and Colobanthus quitensis (Caryophyllaceae), from the viewpoint of modern historical phytogeography and related fields of science. Some authors suggested the Tertiary relict status of these plants in Antarctica, while others favour their recent Holocene immigration. Direct data (fossil or molecular genetic ones) for solving this controversy is still lacking. However, there is no convincing evidence supporting the Tertiary relict status of these plants in Antarctica. Most probably D. antarctica and C. quitensis migrated to Antarctica in the Holocene or Late Pleistocene (last interglacial?) through bird-aided long-distance dispersal. It should be critically tested by (1) appropriate methods of molecular phylogeography, (2) molecular clock methods, if feasible, (3) direct paleobotanical studies, (4) paleoclimatic reconstructions, and (5) comparison with cases of taxa with similar distribution/dispersal patterns. The problem of the origin of Antarctic vascular plants is a perfect model for integration of modern methods of molecular phylogeography and phylogenetics, population biology, paleobiology and paleogeography for solving a long-standing enigma of historical plant geography and evolution.

  6. Bryophyte and lichen indicators of air pollution in Christchurch, New Zealand

    Energy Technology Data Exchange (ETDEWEB)

    Daly, G T

    1970-01-01

    In the winters of 1968 and 1969 a survey was made of the growth and distribution of bryophyte and lichen species within communities on tree trunks, stone walls, nonmetallic roofs and soil in Christchurch, New Zealand. The survey was stimulated by European and Scandinavian work which has shown that high levels of urban and industrial air pollution have caused severe reductions in the distribution of normally-abundant cryptogams. The present survey has demonstrated that a similar, but at present less severe, reduction in bryophyte and lichen flora occurs in Christchurch. Removal of sensitive species through their inability to grow at even moderate levels of winter pollution is considered the most likely cause. An initial transplant experiment indicates that damage to sensitive mosses like Hypnum and Brachythecium may occur within 3 months of exposure to city air. Gilbert and others have shown that in northern England sensitive mosses and lichens begin to die when the average winter sulphur dioxide level reaches 50 ..mu..g/m/sup 3/ of air. This relationship has been confirmed in Christchurch, a moderately polluted city. Numbers of species and the area covered by sensitive mosses, hepatics and lichens reduce sharply along a broad transect into the centre of Christchurch from the west. Further work should display the distribution patterns of sensitive species. However, the information reported here demonstrates the possibility of using changes in selected mosses and lichens to indicate the trends in winter sulphur dioxide pollution in the city. Many of the genera and species of bryophytes and lichens prominent in the English survey were also found to be common in Christchurch. Introduction on plants and building materials during colonial times is considered likely.

  7. Edge effects on understory epiphytic ferns and epiphyllous bryophytes in moist afromontane forests of Ethiopia

    Directory of Open Access Journals (Sweden)

    Hylander Kristoffer

    2013-12-01

    Full Text Available Most studies on edge effects in tropical forests have been conducted in landscapes with low human population density and in situations where the edges have been left unused after logging of the adjacent area. Here we studied forest margins heavily used by local farmers in a forest/agriculture mosaic landscape in Ethiopia. We compared forest structure and plant species composition across 41 forest-agriculture ecotones from 200 m out into the agricultural area to 200 m into the forest. There are strong edge effects from the edge and into the forest on canopy cover and number of stumps and apparently these forest-agricultural edges are intensively used by humans. They are penetrated by paths, beehives are found in the trees, timber of various dimensions is harvested and there is sometimes substantial cover of perennial wild (or semi-wild crops such as coffee and spices. The number of understory epiphytic fern species as well as number of epiphyllous (i.e., growing on leaves bryophyte species was lower at 20 m than at 75 m from the edge. The number of fern species was higher in newly created edges and thereafter they declined, which indicates an extinction debt. This pattern was not seen for the epiphyllous bryophytes. It is likely that different human management activities are responsible for many of the found edge effects besides wind and sun effects from the edge. Tropical forest margins provide important resources for people in many landscapes. It is important to understand how such use affects the biota of the forests. This study shows that there are substantial edge effects, but that the edge effects do not seem to become worse over time for epiphyllous bryophytes and only slightly so for ferns.

  8. Diaspore bank of bryophytes in tropical rain forests: the importance of breeding system, phylum and microhabitat.

    Science.gov (United States)

    Maciel-Silva, Adaíses S; Válio, Ivany Ferraz Marques; Rydin, Håkan

    2012-02-01

    Diaspore banks are crucial for the maintenance and resilience of plant communities, but diaspore banks of bryophytes remain poorly known, especially from tropical ecosystems. This is the first study to focus on the role of diaspore banks of bryophytes in tropical rain forests. Our aim was to test whether microhabitat (substrate type) and species traits (breeding system, phylum) are important in explaining the diaspore bank composition. Using samples cultivated in the laboratory, we assessed the number of species and shoots emerging from bark, decaying wood and soil from two sites of the Atlantic rain forest (montane and sea level) in Brazil by comparing the contribution of species by phylum (mosses, liverworts) and breeding system (monoicous, dioicous). More species emerged from bark (68) and decaying wood (55) than from soil (22). Similar numbers of species were found at both sites. Mosses were more numerous in terms of number of species and shoots, and monoicous species dominated over dioicous species. Substrate pH had only weak effects on shoot emergence. Species commonly producing sporophytes and gemmae had a high contribution to the diaspore banks. These superficial diaspore banks represented the extant vegetation rather well, but held more monoicous species (probably short-lived species) compared to dioicous ones. We propose that diaspore bank dynamics are driven by species traits and microhabitat characteristics, and that short-term diaspore banks of bryophytes in tropical rain forests contribute to fast (re)establishment of species after disturbances and during succession, particularly dioicous mosses investing in asexual reproduction and monoicous mosses investing in sexual reproduction.

  9. Traditional ecological knowledge among Sami reindeer herders in northern Sweden about vascular plants grazed by reindeer

    Directory of Open Access Journals (Sweden)

    Berit Inga

    2013-03-01

    Full Text Available Traditional knowledge about how reindeer utilize forage resources was expected to be crucial to reindeer herders. Seventeen Sami reindeer herders in four reindeer herding communities in Sweden (“samebyar” in Swedish were interviewed about plants species considered to be important reindeer food plants in scientific literature. Among 40 plant species, which the informants were asked to identify and indicate whether and when they were grazed by reindeer, they identified a total of 21 plant taxa and five plant groups. They especially recognised species that were used as human food by the Sami themselves, but certain specific forage plants were also identified. Detailed knowledge of vascular plants at the species level was surprisingly general, which may indicate that knowledge of pasture resources in a detailed species level is not of vital importance. This fact is in sharp contradiction to the detailed knowledge that Sami people express for example about reindeer (as an animal or snow (as physical element. The plausible explanation is that observations of individual plant species are unnecessarily detailed information in large-scale reindeer pastoralism, because the animals graze freely under loose herding and border surveillance.

  10. Floristic inventory of vascular plant in Nam Ha National Biodiversity Conservation Area, Lao People's Democratic Republic

    Directory of Open Access Journals (Sweden)

    Jeong Ho Park

    2018-06-01

    Full Text Available The floristic inventory of vascular plants in Nam Ha National Biodiversity Conservation Area was conducted to understand the plant diversity in the northern area of Lao People's Democratic Republic. From the joint field surveys between Korean and Laos experts conducted during 2015–2017, it was found that there are 64 families, 145 genera, and 189 species distributed in the Nam Ba National Biodiversity Conservation Area, and a total of 56 families, 117 genera, and 148 species which comprise more than 78% of the total species were identified as endemic plants to the Lao People's Democratic Republic. Considering the usage of the plants, there are 91 species of medicinal plants, 33 species of ornamental plants, eight species of edible plants, and 16 species of economic plants. In addition, it was found out that Dalbergia balansae and Cinnamomum macrocarpum are categorized as vulnerable in the International Union for Conservation of Nature (IUCN Red list, and 13 more species are categorized as the least concern.

  11. Vascular plant and vertebrate species richness in national parks of the eastern United States

    Science.gov (United States)

    Hatfield, Jeffrey S.; Myrick, Kaci E.; Huston, Michael A.; Weckerly, Floyd W.; Green, M. Clay

    2013-01-01

    Given the estimates that species diversity is diminishing at 50-100 times the normal rate, it is critical that we be able to evaluate changes in species richness in order to make informed decisions for conserving species diversity. In this study, we examined the potential of vascular plant species richness to be used as a surrogate for vertebrate species richness in the classes of amphibians, reptiles, birds, and mammals. Vascular plants, as primary producers, represent the biotic starting point for ecological community structure and are the logical place to start for understanding vertebrate species associations. We used data collected by the United States (US) National Park Service (NPS) on species presence within parks in the eastern US to estimate simple linear regressions between plant species richness and vertebrate richness. Because environmental factors may also influence species diversity, we performed simple linear regressions of species richness versus natural logarithm of park area, park latitude, mean annual precipitation, mean annual temperature, and human population density surrounding the parks. We then combined plant species richness and environmental variables in multiple regressions to determine the variables that remained as significant predictors of vertebrate species richness. As expected, we detected significant relationships between plant species richness and amphibian, bird, and mammal species richness. In some cases, plant species richness was predicted by park area alone. Species richness of mammals was only related to plant species richness. Reptile species richness, on the other hand, was related to plant species richness, park latitude and annual precipitation, while amphibian species richness was related to park latitude, park area, and plant species richness. Thus, plant species richness predicted species richness of different vertebrate groups to varying degrees and should not be used exclusively as a surrogate for vertebrate

  12. Antioxidant and signal modulation properties of plant polyphenols in controlling vascular inflammation.

    Science.gov (United States)

    Kostyuk, Vladimir A; Potapovich, Alla I; Suhan, Tatyana O; de Luca, Chiara; Korkina, Liudmila G

    2011-05-11

    Oxidized low-density lipoproteins (oxLDL) play a critical role in the initiation of atherosclerosis through activation of inflammatory signaling. In the present work we investigated the role of antioxidant and signal modulation properties of plant polyphenols in controlling vascular inflammation. Significant decrease in intracellular NO level and superoxide overproduction was found in human umbilical vein endothelial cells (HUVEC) treated with oxLDL, but not with LDL. The redox imbalance was prevented by the addition of quercetin or resveratrol. Expression analysis of 14 genes associated with oxidative stress and inflammation revealed oxLDL-mediated up-regulation of genes specifically involved in leukocyte recruitment and adhesion. This up-regulation could be partially avoided by the addition of verbascoside or resveratrol, while treatment with quercetin resulted in a further increase in the expression of these genes. Lipopolysaccharide (LPS)-treated HUVEC were also used for the evaluation of anti-inflammatory potency of plant polyphenols. Significant differences between HUVEC treaded with oxLDL and LPS were found in both the expression pattern of inflammation-related genes and the effects of plant polyphenols on cellular responses. The present data indicate that plant polyphenols may affect vascular inflammation not only as antioxidants but also as modulators of inflammatory redox signaling pathways. Crown Copyright © 2011. Published by Elsevier B.V. All rights reserved.

  13. RAINBIO: a mega-database of tropical African vascular plants distributions

    Directory of Open Access Journals (Sweden)

    Dauby Gilles

    2016-11-01

    Full Text Available The tropical vegetation of Africa is characterized by high levels of species diversity but is undergoing important shifts in response to ongoing climate change and increasing anthropogenic pressures. Although our knowledge of plant species distribution patterns in the African tropics has been improving over the years, it remains limited. Here we present RAINBIO, a unique comprehensive mega-database of georeferenced records for vascular plants in continental tropical Africa. The geographic focus of the database is the region south of the Sahel and north of Southern Africa, and the majority of data originate from tropical forest regions. RAINBIO is a compilation of 13 datasets either publicly available or personal ones. Numerous in depth data quality checks, automatic and manual via several African flora experts, were undertaken for georeferencing, standardization of taxonomic names and identification and merging of duplicated records. The resulting RAINBIO data allows exploration and extraction of distribution data for 25,356 native tropical African vascular plant species, which represents ca. 89% of all known plant species in the area of interest. Habit information is also provided for 91% of these species.

  14. Silicon in vascular plants: uptake, transport and its influence on mineral stress under acidic conditions.

    Science.gov (United States)

    Pontigo, Sofía; Ribera, Alejandra; Gianfreda, Liliana; de la Luz Mora, María; Nikolic, Miroslav; Cartes, Paula

    2015-07-01

    So far, considerable advances have been achieved in understanding the mechanisms of Si uptake and transport in vascular plants. This review presents a comprehensive update about this issue, but also provides the new insights into the role of Si against mineral stresses that occur in acid soils. Such information could be helpful to understand both the differential Si uptake ability as well as the benefits of this mineral element on plants grown under acidic conditions. Silicon (Si) has been widely recognized as a beneficial element for many plant species, especially under stress conditions. In the last few years, great efforts have been made to elucidate the mechanisms involved in uptake and transport of Si by vascular plants and recently, different Si transporters have been identified. Several researches indicate that Si can alleviate various mineral stresses in plants growing under acidic conditions, including aluminium (Al) and manganese (Mn) toxicities as well as phosphorus (P) deficiency all of which are highly detrimental to crop production. This review presents recent findings concerning the influence of uptake and transport of Si on mineral stress under acidic conditions because a knowledge of this interaction provides the basis for understanding the role of Si in mitigating mineral stress in acid soils. Currently, only four Si transporters have been identified and there is little information concerning the response of Si transporters under stress conditions. More investigations are therefore needed to establish whether there is a relationship between Si transporters and the benefits of Si to plants subjected to mineral stress. Evidence presented suggests that Si supply and its subsequent accumulation in plant tissues could be exploited as a strategy to improve crop productivity on acid soils.

  15. Inventory of Bryophytes in the “Bulgarka” Nature Park

    Directory of Open Access Journals (Sweden)

    Plamen S. Stoyanov

    2016-06-01

    Full Text Available This study reports data on the diversity of bryophytes in the Bulgarka Nature Park. The registered 55 species belonged to 23 families and 46 genera. Six species were with conservationstatus; 2 were assessed as Not Evaluated. The main threats were assessed and measures towardsbryophyte conservation were proposed.

  16. Patterns of bryophyte diversity in arable fields of Lithuania

    Directory of Open Access Journals (Sweden)

    Danguolė Andriušaitytė

    2013-03-01

    Full Text Available The paper presents research data on bryophyte diversity in arable land throughout the territory of Lithuania. The bryoflora was analyzed regarding systematic structure and morphological forms, life-history strategies, mode of reproduction and frequency of species. Bryophyte diversity in arable fields of Lithuania was compared with that of Slovakia and the British Isles, which are positioned in different geographical regions of Europe. A total of 97 species of bryophytes of 25 families and 48 genera were ascertained. Dominance of acrocarpous mosses and thalloid liverworts, high representation of Pottiaceae, Bryaceae, Mielichhoferiaceae and Ricciaceae families as well as Bryum, Dicranella, Pohlia and Riccia genera, wide distribution of annual shuttles and ephemeral colonists, high reproduction effort of the species (frequent sporophytes and asexual propagules were specific features of the bryophytes of the studied habitats as a result of adaptations to regular disturbances. The distribution of species into six frequency groups seemed to be uneven. The most abundant group of species with the lowest frequency (1–3 records covered 53.6% of all species. The group contained about 90% of all many-year potential life span species recorded in the habitat. Species with short life span were distributed quite evenly throughout frequency groups. No regionally-specific species were ascertained in the studied habitat. Most of arable-land-specific species recorded in Lithuania is distributed throughout different regions of Europe.

  17. Fungal root symbionts of high-altitude vascular plants in the Himalayas.

    Science.gov (United States)

    Kotilínek, Milan; Hiiesalu, Inga; Košnar, Jiří; Šmilauerová, Marie; Šmilauer, Petr; Altman, Jan; Dvorský, Miroslav; Kopecký, Martin; Doležal, Jiří

    2017-07-26

    Arbuscular mycorrhizal fungi (AMF) and dark septate endophytes (DSE) form symbiotic relationships with plants influencing their productivity, diversity and ecosystem functions. Only a few studies on these fungi, however, have been conducted in extreme elevations and none over 5500 m a.s.l., although vascular plants occur up to 6150 m a.s.l. in the Himalayas. We quantified AMF and DSE in roots of 62 plant species from contrasting habitats along an elevational gradient (3400-6150 m) in the Himalayas using a combination of optical microscopy and next generation sequencing. We linked AMF and DSE communities with host plant evolutionary history, ecological preferences (elevation and habitat type) and functional traits. We detected AMF in elevations up to 5800 m, indicating it is more constrained by extreme conditions than the host plants, which ascend up to 6150 m. In contrast, DSE were found across the entire gradient up to 6150 m. AMF diversity was unimodally related to elevation and positively related to the intensity of AMF colonization. Mid-elevation steppe and alpine plants hosted more diverse AMF communities than plants from deserts and the subnival zone. Our results bring novel insights to the abiotic and biotic filters structuring AMF and DSE communities in the Himalayas.

  18. Survey of protected vascular plants on the Oak Ridge Reservation, Oak Ridge, Tennessee

    Energy Technology Data Exchange (ETDEWEB)

    Awl, D.J.; Pounds, L.R.; Rosensteel, B.A.; King, A.L.; Hamlett, P.A.

    1996-06-01

    Vascular plant surveys were initiated during fiscal year 1992 by the environmentally sensitive areas program to determine the baseline condition of threatened and endangered (T&E) vascular plant species on the Oak Ridge Reservation (ORR). T&E species receive protection under federal and state regulations. In addition, the National Environmental Policy Act (NEPA) requires that federally-funded projects avoid or mitigate impacts to listed species. T&E plant species found on or near the U.S. Department of Energy`s (DOE) Oak Ridge Reservation (ORR) are identified. Twenty-eight species identified on the ORR are listed by the Tennessee Department of Environment and Conservation as either endangered, threatened, or of special concern. Four of these have been under review by the U.S. Fish and Wildlife Service for possible listing (listed in the formerly-used C2 candidate category). Additional species listed by the state occur near and may be present on the ORR. A range of habitats support the rare taxa on the ORR: river bluffs, sinkholes, calcareous barrens, wetlands, utility corridors, and forests. The list of T&E plant species and their locations on the ORR should be considered provisional because the entire ORR has not been surveyed, and state and federal status of all species continues to be updated. The purpose of this document is to present information on the listed T&E plant species currently known to occur on the ORR as well as listed species potentially occurring on the ORR based on geographic range and habitat availability. For the purpose of this report, {open_quotes}T&E species{close_quotes} include all federal- and state-listed species, including candidates for listing, and species of special concern. Consideration of T&E plant habitats is an important component of resource management and land-use planning; protection of rare species in their natural habitat is the best method of ensuring their long-term survival.

  19. Survey of protected vascular plants on the Oak Ridge Reservation, Oak Ridge, Tennessee

    International Nuclear Information System (INIS)

    Awl, D.J.; Pounds, L.R.; Rosensteel, B.A.; King, A.L.; Hamlett, P.A.

    1996-06-01

    Vascular plant surveys were initiated during fiscal year 1992 by the environmentally sensitive areas program to determine the baseline condition of threatened and endangered (T ampersand E) vascular plant species on the Oak Ridge Reservation (ORR). T ampersand E species receive protection under federal and state regulations. In addition, the National Environmental Policy Act (NEPA) requires that federally-funded projects avoid or mitigate impacts to listed species. T ampersand E plant species found on or near the U.S. Department of Energy's (DOE) Oak Ridge Reservation (ORR) are identified. Twenty-eight species identified on the ORR are listed by the Tennessee Department of Environment and Conservation as either endangered, threatened, or of special concern. Four of these have been under review by the U.S. Fish and Wildlife Service for possible listing (listed in the formerly-used C2 candidate category). Additional species listed by the state occur near and may be present on the ORR. A range of habitats support the rare taxa on the ORR: river bluffs, sinkholes, calcareous barrens, wetlands, utility corridors, and forests. The list of T ampersand E plant species and their locations on the ORR should be considered provisional because the entire ORR has not been surveyed, and state and federal status of all species continues to be updated. The purpose of this document is to present information on the listed T ampersand E plant species currently known to occur on the ORR as well as listed species potentially occurring on the ORR based on geographic range and habitat availability. For the purpose of this report, open-quotes T ampersand E speciesclose quotes include all federal- and state-listed species, including candidates for listing, and species of special concern. Consideration of T ampersand E plant habitats is an important component of resource management and land-use planning; protection of rare species in their natural habitat is the best method of ensuring their

  20. The French Muséum national d'histoire naturelle vascular plant herbarium collection dataset

    Science.gov (United States)

    Le Bras, Gwenaël; Pignal, Marc; Jeanson, Marc L.; Muller, Serge; Aupic, Cécile; Carré, Benoît; Flament, Grégoire; Gaudeul, Myriam; Gonçalves, Claudia; Invernón, Vanessa R.; Jabbour, Florian; Lerat, Elodie; Lowry, Porter P.; Offroy, Bérangère; Pimparé, Eva Pérez; Poncy, Odile; Rouhan, Germinal; Haevermans, Thomas

    2017-02-01

    We provide a quantitative description of the French national herbarium vascular plants collection dataset. Held at the Muséum national d'histoire naturelle, Paris, it currently comprises records for 5,400,000 specimens, representing 90% of the estimated total of specimens. Ninety nine percent of the specimen entries are linked to one or more images and 16% have field-collecting information available. This major botanical collection represents the results of over three centuries of exploration and study. The sources of the collection are global, with a strong representation for France, including overseas territories, and former French colonies. The compilation of this dataset was made possible through numerous national and international projects, the most important of which was linked to the renovation of the herbarium building. The vascular plant collection is actively expanding today, hence the continuous growth exhibited by the dataset, which can be fully accessed through the GBIF portal or the MNHN database portal (available at: https://science.mnhn.fr/institution/mnhn/collection/p/item/search/form). This dataset is a major source of data for systematics, global plants macroecological studies or conservation assessments.

  1. The French Muséum national d’histoire naturelle vascular plant herbarium collection dataset

    Science.gov (United States)

    Le Bras, Gwenaël; Pignal, Marc; Jeanson, Marc L.; Muller, Serge; Aupic, Cécile; Carré, Benoît; Flament, Grégoire; Gaudeul, Myriam; Gonçalves, Claudia; Invernón, Vanessa R.; Jabbour, Florian; Lerat, Elodie; Lowry, Porter P.; Offroy, Bérangère; Pimparé, Eva Pérez; Poncy, Odile; Rouhan, Germinal; Haevermans, Thomas

    2017-01-01

    We provide a quantitative description of the French national herbarium vascular plants collection dataset. Held at the Muséum national d’histoire naturelle, Paris, it currently comprises records for 5,400,000 specimens, representing 90% of the estimated total of specimens. Ninety nine percent of the specimen entries are linked to one or more images and 16% have field-collecting information available. This major botanical collection represents the results of over three centuries of exploration and study. The sources of the collection are global, with a strong representation for France, including overseas territories, and former French colonies. The compilation of this dataset was made possible through numerous national and international projects, the most important of which was linked to the renovation of the herbarium building. The vascular plant collection is actively expanding today, hence the continuous growth exhibited by the dataset, which can be fully accessed through the GBIF portal or the MNHN database portal (available at: https://science.mnhn.fr/institution/mnhn/collection/p/item/search/form). This dataset is a major source of data for systematics, global plants macroecological studies or conservation assessments. PMID:28195585

  2. Anti-atherosclerotic plants which modulate the phenotype of vascular smooth muscle cells.

    Science.gov (United States)

    Saleh Al-Shehabi, Tuqa; Iratni, Rabah; Eid, Ali H

    2016-10-15

    Cardiovascular disease (CVD) remains the leading cause of global death, with atherosclerosis being a major contributor to this mortality. Several mechanisms are implicated in the pathogenesis of this disease. A key element in the development and progression of atherosclerotic lesions is the phenotype of vascular smooth muscle cells. Under pathophysiologic conditions such as injury, these cells switch from a contractile to a synthetic phenotype that often possesses high proliferative and migratory capacities. Despite major advances made in the management and treatment of atherosclerosis, mortality associated with this disease remains high. This mandates that other approaches be sought. Herbal medicine, especially for the treatment of CVD, has been gaining more attention in recent years. This is in no small part due to the evidence-based values associated with the consumption of many plants as well as the relatively cheaper prices, easier access and conventional folk medicine "inherited" over generations. Sections: In this review, we provide a brief introduction about the pathogenesis of atherosclerosis then we highlight the role of vascular smooth muscle cells in this disease, especially when a phenotypic switch of these cells arises. We then thoroughly discuss the various plants that show potentially beneficial effects as anti-atherosclerotic, with prime attention given to herbs and plants that inhibit the phenotypic switch of vascular smooth muscle cells. Accumulating evidence provides the justification for the use of botanicals in the treatment or prevention of atherosclerosis. However, further studies, especially clinical ones, are warranted to better define several pharmacological parameters of these herbs, such as toxicity, tolerability, and efficacy. Copyright © 2015 Elsevier Ltd. All rights reserved.

  3. Vascular Plant and Vertebrate Inventory of Organ Pipe Cactus National Monument

    Science.gov (United States)

    Schmidt, Cecilia A.; Powell, Brian F.; Halvorson, William L.

    2007-01-01

    Executive Summary We summarized inventory and monitoring efforts for plants and vertebrates at Organ Pipe Cactus National Monument (NM) in Arizona. We used data from previous research to compile complete species lists for the monument and to assess inventory completeness. There have been 1,031 species of plants and vertebrates observed at the monument. Most of the species on the list are documented by voucher specimens. There are 59 non-native species established in the monument: one mammal, three birds, and 55 non-native plants. Most non-native plant species were first recorded along roads. In each taxon-specific chapter, we highlight areas that contribute disproportionately to species richness or that have unique species for the monument. Of particular importance are Quitobaquito Springs and Pond, which are responsible for the monument having one of the highest number of bird species in the Sonoran Desert Network of parks. Quitobaquito also contains the only fish in the monument, the endangered Quitobaquito pupfish (Cyprinodon eremus). Other important resources for the plants and vertebrates include the xeroriparian washes (e.g., Alamo Canyon) and the Ajo Mountains. Based on the review of past studies, we believe the inventories of vascular plants and vertebrates are nearly complete and that the monument has one of the most complete inventories of any unit in the Sonoran Desert Network.

  4. A bHLH-Based Feedback Loop Restricts Vascular Cell Proliferation in Plants.

    Science.gov (United States)

    Vera-Sirera, Francisco; De Rybel, Bert; Úrbez, Cristina; Kouklas, Evangelos; Pesquera, Marta; Álvarez-Mahecha, Juan Camilo; Minguet, Eugenio G; Tuominen, Hannele; Carbonell, Juan; Borst, Jan Willem; Weijers, Dolf; Blázquez, Miguel A

    2015-11-23

    Control of tissue dimensions in multicellular organisms requires the precise quantitative regulation of mitotic activity. In plants, where cells are immobile, tissue size is achieved through control of both cell division orientation and mitotic rate. The bHLH transcription factor heterodimer formed by target of monopteros5 (TMO5) and lonesome highway (LHW) is a central regulator of vascular width-increasing divisions. An important unanswered question is how its activity is limited to specify vascular tissue dimensions. Here we identify a regulatory network that restricts TMO5/LHW activity. We show that thermospermine synthase ACAULIS5 antagonizes TMO5/LHW activity by promoting the accumulation of SAC51-LIKE (SACL) bHLH transcription factors. SACL proteins heterodimerize with LHW-therefore likely competing with TMO5/LHW interactions-prevent activation of TMO5/LHW target genes, and suppress the over-proliferation caused by excess TMO5/LHW activity. These findings connect two thus-far disparate pathways and provide a mechanistic understanding of the quantitative control of vascular tissue growth. Copyright © 2015 Elsevier Inc. All rights reserved.

  5. The Root-Associated Microbial Community of the World's Highest Growing Vascular Plants.

    Science.gov (United States)

    Angel, Roey; Conrad, Ralf; Dvorsky, Miroslav; Kopecky, Martin; Kotilínek, Milan; Hiiesalu, Inga; Schweingruber, Fritz; Doležal, Jiří

    2016-08-01

    Upward migration of plants to barren subnival areas is occurring worldwide due to raising ambient temperatures and glacial recession. In summer 2012, the presence of six vascular plants, growing in a single patch, was recorded at an unprecedented elevation of 6150 m.a.s.l. close to the summit of Mount Shukule II in the Western Himalayas (Ladakh, India). Whilst showing multiple signs of stress, all plants have managed to establish stable growth and persist for several years. To learn about the role of microbes in the process of plant upward migration, we analysed the root-associated microbial community of the plants (three individuals from each) using microscopy and tagged amplicon sequencing. No mycorrhizae were found on the roots, implying they are of little importance to the establishment and early growth of the plants. However, all roots were associated with a complex bacterial community, with richness and diversity estimates similar or even higher than the surrounding bare soil. Both soil and root-associated communities were dominated by members of the orders Sphingomonadales and Sphingobacteriales, which are typical for hot desert soils, but were different from communities of temperate subnival soils and typical rhizosphere communities. Despite taxonomic similarity on the order level, the plants harboured a unique set of highly dominant operational taxonomic units which were not found in the bare soil. These bacteria have been likely transported with the dispersing seeds and became part of the root-associated community following germination. The results indicate that developing soils act not only as a source of inoculation to plant roots but also possibly as a sink for plant-associated bacteria.

  6. Arbuscular mycorrhizal fungi associations of vascular plants confined to river valleys: towards understanding the river corridor plant distribution.

    Science.gov (United States)

    Nobis, Agnieszka; Błaszkowski, Janusz; Zubek, Szymon

    2015-01-01

    The group of river corridor plants (RCP) includes vascular plant species which grow mainly or exclusively in the valleys of large rivers. Despite the long recognized fact that some plant species display a corridor-like distribution pattern in Central Europe, there is still no exhaustive explanation of the mechanisms generating this peculiar distribution. The main goal of this study was therefore to investigate whether arbuscular mycorrhizal fungi (AMF) and fungal root endophytes influence the RCP distribution. Arbuscular mycorrhizae (AM) were observed in 19 out of 33 studied RCP. Dark septate endophytes (DSE) and Olpidium spp. were recorded with low abundance in 15 and 10 plant species, respectively. The spores of AMF were found only in 32% of trap cultures established from the soils collected in the river corridor habitats. In total, six widespread AMF species were identified. Because the percentage of non-mycorrhizal species in the group of RCP is significant and the sites in river corridors are characterized by low AMF species diversity, RCP can be outcompeted outside river valleys by the widespread species that are able to benefit from AM associations in more stable plant-AMF communities in non-river habitats.

  7. Local above-ground persistence of vascular plants : Life-history trade-offs and environmental constraints

    NARCIS (Netherlands)

    Ozinga, Wim A.; Hennekens, Stephan M.; Schaminee, Joop H. J.; Smits, Nina A. C.; Bekker, Renee M.; Roemermann, Christine; Klimes, Leos; Bakker, Jan P.; van Groenendael, Jan M.

    Questions: 1. Which plant traits and habitat characteristics best explain local above-ground persistence of vascular plant species and 2. Is there a trade-off between local above-ground persistence and the ability for seed dispersal and below-ground persistence in the soil seed bank? Locations: 845

  8. Vascular plants of Mt. Dosolsan in the Demilitarized Zone Civilian Control Line

    Directory of Open Access Journals (Sweden)

    Jong Bin An

    2018-06-01

    Full Text Available This study is aimed at identifying the distribution of vascular plants growing at Mt. Dosolsan in Yanggu-gun, Gangwon-do. Field surveys were conducted for each season from March 2014 to November 2016. The flora of study area is found to consist of 516 taxa, 91 families, 296 genus, 455 species, four subspecies, 50 varieties, and seven forma. Rare plants were found to be of 31 taxa. Among them, rare plant species consisted of critically endangered species (CR degree: 2 (Lilium dauricum Ker Gawl., Cypripedium macranthos Sw., endangered species (EN degree: 5 (Loranthus tanakae Franch. & Sav. etc., vulnerable species (VU degree: 7 (Dryopteris laeta (Kom. C.Chr. etc., and least concerned (LC degree: 17 (Botrychium virginianum (L. Sw. etc.. In all the surveyed areas, a total of 20 taxa (Pseudostellaria setulosa Ohwi etc. were found to be endemic to Korea. The floristic special plants found in the surveyed areas were two taxa of grade V, 24 taxa of grade IV, and 31 taxa of grade III. The naturalized plants were identified as 15 taxa and included Chenopodium album L., Lotus corniculatus L., Robinia pseudoacacia L. etc.

  9. Bacterial diversity in rhizosphere soil from Antarctic vascular plants of Admiralty Bay, maritime Antarctica.

    Science.gov (United States)

    Teixeira, Lia C R S; Peixoto, Raquel S; Cury, Juliano C; Sul, Woo Jun; Pellizari, Vivian H; Tiedje, James; Rosado, Alexandre S

    2010-08-01

    The Antarctic is a pristine environment that contributes to the maintenance of the global climate equilibrium. The harsh conditions of this habitat are fundamental to selecting those organisms able to survive in such an extreme habitat and able to support the relatively simple ecosystems. The DNA of the microbial community associated with the rhizospheres of Deschampsia antarctica Desv (Poaceae) and Colobanthus quitensis (Kunth) BartI (Caryophyllaceae), the only two native vascular plants that are found in Antarctic ecosystems, was evaluated using a 16S rRNA multiplex 454 pyrosequencing approach. This analysis revealed similar patterns of bacterial diversity between the two plant species from different locations, arguing against the hypothesis that there would be differences between the rhizosphere communities of different plants. Furthermore, the phylum distribution presented a peculiar pattern, with a bacterial community structure different from those reported of many other soils. Firmicutes was the most abundant phylum in almost all the analyzed samples, and there were high levels of anaerobic representatives. Also, some phyla that are dominant in most temperate and tropical soils, such as Acidobacteria, were rarely found in the analyzed samples. Analyzing all the sample libraries together, the predominant genera found were Bifidobacterium (phylum Actinobacteria), Arcobacter (phylum Proteobacteria) and Faecalibacterium (phylum Firmicutes). To the best of our knowledge, this is the first major bacterial sequencing effort of this kind of soil, and it revealed more than expected diversity within these rhizospheres of both maritime Antarctica vascular plants in Admiralty Bay, King George Island, which is part of the South Shetlands archipelago.

  10. Testing the Efficacy of DNA Barcodes for Identifying the Vascular Plants of Canada.

    Science.gov (United States)

    Braukmann, Thomas W A; Kuzmina, Maria L; Sills, Jesse; Zakharov, Evgeny V; Hebert, Paul D N

    2017-01-01

    Their relatively slow rates of molecular evolution, as well as frequent exposure to hybridization and introgression, often make it difficult to discriminate species of vascular plants with the standard barcode markers (rbcL, matK, ITS2). Previous studies have examined these constraints in narrow geographic or taxonomic contexts, but the present investigation expands analysis to consider the performance of these gene regions in discriminating the species in local floras at sites across Canada. To test identification success, we employed a DNA barcode reference library with sequence records for 96% of the 5108 vascular plant species known from Canada, but coverage varied from 94% for rbcL to 60% for ITS2 and 39% for matK. Using plant lists from 27 national parks and one scientific reserve, we tested the efficacy of DNA barcodes in identifying the plants in simulated species assemblages from six biogeographic regions of Canada using BLAST and mothur. Mean pairwise distance (MPD) and mean nearest taxon distance (MNTD) were strong predictors of barcode performance for different plant families and genera, and both metrics supported ITS2 as possessing the highest genetic diversity. All three genes performed strongly in assigning the taxa present in local floras to the correct genus with values ranging from 91% for rbcL to 97% for ITS2 and 98% for matK. However, matK delivered the highest species discrimination (~81%) followed by ITS2 (~72%) and rbcL (~44%). Despite the low number of plant taxa in the Canadian Arctic, DNA barcodes had the least success in discriminating species from this biogeographic region with resolution ranging from 36% with rbcL to 69% with matK. Species resolution was higher in the other settings, peaking in the Woodland region at 52% for rbcL and 87% for matK. Our results indicate that DNA barcoding is very effective in identifying Canadian plants to a genus, and that it performs well in discriminating species in regions where floristic diversity is

  11. Overview of bryophyte flora research in Serbia with presentation of the Serbian BRYO database

    Directory of Open Access Journals (Sweden)

    Pantović Jovana

    2017-10-01

    Full Text Available Bryophyte flora research in Serbia was rather sporadic until the end of the 19th century, when a group of mostly high-school teachers started researching bryophytes. This was the first fruitful period of exploration, with many new country records. Thereafter, not many researchers investigated bryophytes in Serbia, and the majority of chorological data came from vegetation, ecological, or palaeobotanical studies. This lasted until the 1990s, when a revival of bryophyte investigation occurred, bringing with it many floristic studies and new species records for the country. At the present time, Serbia is considered to be rich in bryophyte diversity, with as many as 797 species. However, further study and a critical approach to the bryophyte flora of Serbia are needed.

  12. N and P addition inhibits growth of rich fen bryophytes

    DEFF Research Database (Denmark)

    Andersen, Dagmar Kappel; Ejrnæs, Rasmus; Riis, Tenna

    2016-01-01

    vernicosus and paludella squarrosa) rich fen bryophytes were grown in mixed culture and subjected to rainwater or groundwater and three levels of N (0, 1 and 3 mg N L-1) and P (0, 0.05 and 0.1 mg P NL-1). All species responded negatively to higher N-levels and three of four species responded negatively...... to rainwater and higher P-levels. C. cuspidata had highest relative growth rate in all treatments, and the infrequently occurringrare species had lower relative growth rate and were more negatively affected by high levels of N than the frequently occurringcommon species. A negative effect of rainwater seemed...... to be caused by higher background levels of N in rainwater compared to groundwater rather than a pH-effect per se. We found a negative effect of high initial bryophyte density in three of four species indicating density dependent inhibition between species.We suggest that maintenance of oligotrophic conditions...

  13. Photosynthetic limitations in two Antarctic vascular plants: importance of leaf anatomical traits and Rubisco kinetic parameters.

    Science.gov (United States)

    Sáez, Patricia L; Bravo, León A; Cavieres, Lohengrin A; Vallejos, Valentina; Sanhueza, Carolina; Font-Carrascosa, Marcel; Gil-Pelegrín, Eustaquio; Javier Peguero-Pina, José; Galmés, Jeroni

    2017-05-17

    Particular physiological traits allow the vascular plants Deschampsia antarctica Desv. and Colobanthus quitensis (Kunth) Bartl. to inhabit Antarctica. The photosynthetic performance of these species was evaluated in situ, focusing on diffusive and biochemical constraints to CO2 assimilation. Leaf gas exchange, Chl a fluorescence, leaf ultrastructure, and Rubisco catalytic properties were examined in plants growing on King George and Lagotellerie islands. In spite of the species- and population-specific effects of the measurement temperature on the main photosynthetic parameters, CO2 assimilation was highly limited by CO2 diffusion. In particular, the mesophyll conductance (gm)-estimated from both gas exchange and leaf chlorophyll fluorescence and modeled from leaf anatomy-was remarkably low, restricting CO2 diffusion and imposing the strongest constraint to CO2 acquisition. Rubisco presented a high specificity for CO2 as determined in vitro, suggesting a tight co-ordination between CO2 diffusion and leaf biochemistry that may be critical ultimately to optimize carbon balance in these species. Interestingly, both anatomical and biochemical traits resembled those described in plants from arid environments, providing a new insight into plant functional acclimation to extreme conditions. Understanding what actually limits photosynthesis in these species is important to anticipate their responses to the ongoing and predicted rapid warming in the Antarctic Peninsula. © The Author 2017. Published by Oxford University Press on behalf of the Society for Experimental Biology.

  14. Sample sequencing of vascular plants demonstrates widespread conservation and divergence of microRNAs.

    Science.gov (United States)

    Chávez Montes, Ricardo A; de Fátima Rosas-Cárdenas, Flor; De Paoli, Emanuele; Accerbi, Monica; Rymarquis, Linda A; Mahalingam, Gayathri; Marsch-Martínez, Nayelli; Meyers, Blake C; Green, Pamela J; de Folter, Stefan

    2014-04-23

    Small RNAs are pivotal regulators of gene expression that guide transcriptional and post-transcriptional silencing mechanisms in eukaryotes, including plants. Here we report a comprehensive atlas of sRNA and miRNA from 3 species of algae and 31 representative species across vascular plants, including non-model plants. We sequence and quantify sRNAs from 99 different tissues or treatments across species, resulting in a data set of over 132 million distinct sequences. Using miRBase mature sequences as a reference, we identify the miRNA sequences present in these libraries. We apply diverse profiling methods to examine critical sRNA and miRNA features, such as size distribution, tissue-specific regulation and sequence conservation between species, as well as to predict putative new miRNA sequences. We also develop database resources, computational analysis tools and a dedicated website, http://smallrna.udel.edu/. This study provides new insights on plant sRNAs and miRNAs, and a foundation for future studies.

  15. Constraining Biomarkers of Dissolved Organic Matter Sourcing Using Microbial Incubations of Vascular Plant Leachates of the California landscape

    Science.gov (United States)

    Harfmann, J.; Hernes, P.; Chuang, C. Y.; Kaiser, K.; Spencer, R. G.; Guillemette, F.

    2017-12-01

    Source origin of dissolved organic matter (DOM) is crucial in determining reactivity, driving chemical and biological processing of carbon. DOM source biomarkers such as lignin (a vascular plant marker) and D-amino acids (bacterial markers) are well-established tools in tracing DOM origin and fate. The development of high-resolution mass spectrometry and optical studies has expanded our toolkit; yet despite these advances, our understanding of DOM sources and fate remains largely qualitative. Quantitative data on DOM pools and fluxes become increasingly necessary as we refine our comprehension of its composition. In this study, we aim to calibrate and quantify DOM source endmembers by performing microbial incubations of multiple vascular plant leachates, where total DOM is constrained by initial vascular plant input and microbial production. Derived endmembers may be applied to endmember mixing models to quantify DOM source contributions in aquatic systems.

  16. Relationship between the shoot characteristics and plant resistance to vascular-streak dieback on cocoa

    Directory of Open Access Journals (Sweden)

    Agung Wahyu Soesilo

    2014-12-01

    Full Text Available Vascular-streak dieback (Oncobasidium theobromae is a serious disease on cocoa damaging the vegetative tissue especially on the branches and leaves. This research was aimed to identify the relationship between characteristics of sprouting ability and VSD resistance to confirm the response of cocoa to pruning treatment on VSD control and developing criteria for selection. Trial was carried out at Kaliwining Experimental Station of ICCRI, a VSD-endemic area by using 668 plants of hybrid populayion which were derivated from intercrossing among seven clones performing different response to VSD. The resistance was evaluated by scoring the plant damage with the scale of 0-6 on drought season in the year of 2009 and 2011. The characteristics of sprouting ability was assessed by recording the pruned trees for the variables of the number of re-growth shoot, shoot height, number of new shoot per pruned branches, shoot diameter and number of leaves per shoot. It was analyzed that the variables of the number of shoot per pruned branches, shoot diameter, shoot height and number of leaves per shoot were not significantly correlated to the score of VSD damage. Grouping of the resistance also performed similar results whereas mean of the sprouting variables were not different among group but the percentage of sprouted branches tend to be higher with the higher of the resistance (lower score. This result confirmed any mechanism of tolerance on VSD resistance by accelerating shoot rejuvenation on resistant plant. Key words : vascular-streak diaback, cocoa, resistance, characteristics of sprouting

  17. Vascular Plant and Vertebrate Inventory of Casa Grande Ruins National Monument

    Science.gov (United States)

    Powell, Brian F.; Albrecht, Eric W.; Schmidt, Cecilia A.; Halvorson, William L.; Anning, Pamela; Docherty, Kathleen

    2006-01-01

    Executive Summary This report summarizes results of the first comprehensive biological inventory of Casa Grande Ruins National Monument (NM) in southern Arizona. Surveys at the monument were part of a larger effort to inventory vascular plants and vertebrates in eight National Park Service units in Arizona and New Mexico. In 2001 and 2002 we surveyed for vascular plants and vertebrates (amphibians, reptiles, birds, and mammals) at Casa Grande Ruins NM to document the presence, and in some cases relative abundance, of species. By using repeatable study designs and standardized field techniques, which included quantified survey effort, we produced inventories that can serve as the basis for a biological monitoring program. Of the National Park Service units in the region, no other has experienced as much recent ecological change as Casa Grande Ruins NM. Once situated in a large and biologically diverse mesquite bosque near the perennially flowing Gila River, the monument is now a patch of sparse desert vegetation surrounded by urban and commercial development that is rapidly replacing agriculture as the dominant land use in the area. Roads, highways, and canals surround the monument. Development, and its associated impacts, has important implications for the plants and animals that live in the monument. The plant species list is small and the distribution and number of non-native plants appears to be increasing. Terrestrial vertebrates are also being impacted by the changing landscape, which is increasing the isolation of these populations from nearby natural areas and thereby reducing the number of species at the monument. These observations are alarming and are based on our review of previous studies, our research in the monument, and our knowledge of the biogeography and ecology of the Sonoran Desert. Together, these data suggest that the monument has lost a significant portion of its historic complement of species and these changes will likely intensify as

  18. Use of aquatic bryophytes as bio monitors for radioactive studies

    International Nuclear Information System (INIS)

    Damianova, A.; Penev, I.; Drenska, M.

    2006-01-01

    As a widespread water moss Fontinalis antipyretics is frequently used as a biomonitor for trace elements pollution in lakes and running waters. The purpose of this study is to use Fontinalis antipyretics as a tool for monitoring of radioactivity in waters from different rivers (Musalenska Bistriza, Iskar, Maritza, etc.) in Rila Mountain. The radioactivity of aquatic moss, water samples and sediments were measured using HPG detector with the parameters FWHM 2 kev at 6 0Co efficiency 35% with low background. The dose rate measurements (μR/h) show different values according to the place of sampling and reflect the present ecological status of the river ecosystems. The ongoing measurements will allowed the absolute value of 1 37Cs in bryophytes to be determined and eventually some seasonal variations to be observed. A special interest is whether the measured activity is accidental or is as a consequence of a long time accumulation in the bryophytes. In this case they could probably be used for water purification. On that basis the bryophytes could be used for controlling radioactivity of river ecosystems even in high-mountain difficult accessible places replacing the transportation of large volumes of water

  19. Application of the Red List Index for conservation assessment of Spanish vascular plants.

    Science.gov (United States)

    Saiz, Juan Carlos Moreno; Lozano, Felipe Domínguez; Gómez, Manuel Marrero; Baudet, Ángel Bañares

    2015-06-01

    The International Union for Conservation of Nature (IUCN) Red List Index (RLI) is used to measure trends in extinction risk of species over time. The development of 2 red lists for Spanish vascular flora during the past decade allowed us to apply the IUCN RLI to vascular plants in an area belonging to a global biodiversity hotspot. We used the Spanish Red Lists from 2000 and 2010 to assess changes in level of threat at a national scale and at the subnational scales of Canary Islands, Balearic Islands, and peninsular Spain. We assigned retrospective IUCN categories of threat to 98 species included in the Spanish Red List of 2010 but absent in the Spanish Red List of 2000. In addition, we tested the effect of different random and taxonomic and spatial Spanish samples on the overall RLI value. From 2000 to 2010, the IUCN categories of 768 species changed (10% of Spanish flora), mainly due to improved knowledge (63%), modifications in IUCN criteria (14%), and changes in threat status (12%). All measured national and subnational RLI values decreased during this period, indicating a general decline in the conservation status of the Spanish vascular flora. The Canarian RLI value (0.84) was the lowest, although the fastest deterioration in conservation status occurred on peninsular Spain (from 0.93 in 2000 to 0.92 in 2010). The RLI values based on subsamples of the Spanish Red List were not representative of RLI values for the entire country, which would discourage the use of small areas or small taxonomic samples to assess general trends in the endangerment of national biotas. The role of the RLI in monitoring of changes in biodiversity at the global and regional scales needs further reassessment because additional areas and taxa are necessary to determine whether the index is sufficiently sensitive for use in assessing temporal changes in species' risk of extinction. © 2015 Society for Conservation Biology.

  20. Vascular plant flora in the Cytadela cemeteries in Poznań (Poland

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    Aneta Czarna

    2016-12-01

    Full Text Available The paper presents the spontaneous vascular flora and the flora originating from old or contemporary plantations found in all six currently existing cemeteries located in immediate vicinity on the slopes of the Cytadela Park in Poznań. These studies were carried out in the years 2011–2014. Over this period, 255 species of vascular plants were found. The most interesting species include: Chionodoxa luciliae, Rumex rugosus, Aegopodium podagraria ‘Variegatum’, Ficaria verna f. plenifolia, Galanthus nivalis f. pleniflora, Ornithogalum boucheanum, Ranunculus repens ‘Plena’, and hybrids: Dactylis ×intercedens, Gagea ×pomeranica, Ornithogalum boucheanum × O. nutans, Viola cyanea × V. odorata. A great number of spring geophytes, namely 31 species, was also found. Among species occurring spontaneously outside the graves, some were new for Poland, e.g., Chionodoxa luciliae, Ornithogalum boucheanum × O. nutans, Viola cyanea × V. odorata, while others were new for the Wielkopolska region: Rumex rugosus, Dactylis ×intercedens, Gagea ×pomeranica, as well as new for Poznań: Erigeron ramosus, Lilium bulbiferum, Muscari armeniacus, M. neglectum, Pimpinella nigra, Poa subcaerulea, and Veronica hederifolia s. s.

  1. Studies on distribution pattern of 14C-assimilates in relation to vascular pattern derived from phyllotaxis of tomato plants

    International Nuclear Information System (INIS)

    Shishido, Y.; Seyama, N.; Hori, Y.

    1988-01-01

    The association of distribution of photosynthetic assimilates in tomato with phyllotaxis and arrangement of the vascular system was studied. To ascertain the phyllotaxis of tomato plants, which was alternate with four orthostichies with devergence of 90° (270°) and 180°, the vascular system was revealed by methylene blue (0.5%), eothine (1.0%) and fuchsin (1.0%) from leaf petioles and the distribution of photosynthetic assmilates was measured by 14 C. The vascular system of tomato basically consisted of four orthostichies with two vascular bundles from each leaf. The arrangement of the vascular systems evidently affected the movement of 14 C-assimilates to sinks. Such movement from each leaf was affected by the degree of connection of the vascular bundles. Since tomato has a sympodial branching system, the leaf which is apparently situated just above the inflorescence differentiated before the inflorescence. The vascular bundles of the leaf of the sympodial branch around the inflorescence developed between the inflorescence and the leaf just above it. This results in a comparatively small proportion of distribution to the inflorescence from the leaf just above it

  2. Bryophyte colonization history of the virgin volcanic island Surtsey, Iceland

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    G. V. Ingimundardóttir

    2014-08-01

    Full Text Available The island Surtsey was formed in a volcanic eruption south of Iceland in 1963–1967 and has since then been protected and monitored by scientists. The first two moss species were found on Surtsey as early as 1967 and several new bryophyte species were discovered every year until 1973 when regular sampling ended. Systematic bryophyte inventories in a grid of 100 m × 100 m quadrats were made in 1971 and 1972: the number of observed species doubled, with 36 species found in 1971 and 72 species in 1972. Here we report results from an inventory in 2008, when every other of the grid's quadrats were searched for bryophytes. Despite lower sampling intensity than in 1972, distributional expansion and contraction of earlier colonists was revealed as well as the presence of new colonists. A total of 38 species were discovered, 15 of those were not encountered in 1972 and eight had never been reported from Surtsey before (Bryum elegans, Ceratodon heterophyllus, Didymodon rigidulus, Eurhynchium praelongum, Schistidium confertum, S. papillosum, Tortula hoppeana and T. muralis. Habitat loss due to erosion and reduced thermal activity in combination with successional vegetation changes are likely to have played a significant role in the decline of some bryophyte species which were abundant in 1972 (Leptobryum pyriforme, Schistidium apocarpum coll., Funaria hygrometrica, Philonotis spp., Pohlia spp, Schistidium strictum, Sanionia uncinata while others have continued to thrive and expand (e.g. Schistidium maritimum, Racomitrium lanuginosum, R. ericoides, R. fasciculare and Bryum argenteum. Some species (especially Bryum spp. benefit from the formation of new habitats, such as grassland within a gull colony, which was established in 1984. Several newcomers are rarely producing sporophytes on Iceland and are unlikely to have been dispersed by airborne spores. They are more likely to have been introduced to Surtsey by seagulls in the form of vegetative fragments

  3. Bryophyte colonization history of the virgin volcanic island Surtsey, Iceland

    Science.gov (United States)

    Ingimundardóttir, G. V.; Weibull, H.; Cronberg, N.

    2014-08-01

    The island Surtsey was formed in a volcanic eruption south of Iceland in 1963-1967 and has since then been protected and monitored by scientists. The first two moss species were found on Surtsey as early as 1967 and several new bryophyte species were discovered every year until 1973 when regular sampling ended. Systematic bryophyte inventories in a grid of 100 m × 100 m quadrats were made in 1971 and 1972: the number of observed species doubled, with 36 species found in 1971 and 72 species in 1972. Here we report results from an inventory in 2008, when every other of the grid's quadrats were searched for bryophytes. Despite lower sampling intensity than in 1972, distributional expansion and contraction of earlier colonists was revealed as well as the presence of new colonists. A total of 38 species were discovered, 15 of those were not encountered in 1972 and eight had never been reported from Surtsey before (Bryum elegans, Ceratodon heterophyllus, Didymodon rigidulus, Eurhynchium praelongum, Schistidium confertum, S. papillosum, Tortula hoppeana and T. muralis). Habitat loss due to erosion and reduced thermal activity in combination with successional vegetation changes are likely to have played a significant role in the decline of some bryophyte species which were abundant in 1972 (Leptobryum pyriforme, Schistidium apocarpum coll., Funaria hygrometrica, Philonotis spp., Pohlia spp, Schistidium strictum, Sanionia uncinata) while others have continued to thrive and expand (e.g. Schistidium maritimum, Racomitrium lanuginosum, R. ericoides, R. fasciculare and Bryum argenteum). Some species (especially Bryum spp.) benefit from the formation of new habitats, such as grassland within a gull colony, which was established in 1984. Several newcomers are rarely producing sporophytes on Iceland and are unlikely to have been dispersed by airborne spores. They are more likely to have been introduced to Surtsey by seagulls in the form of vegetative fragments or dispersal agents

  4. Bryophyte-Feeders in a Basal Brachyceran Lineage (Diptera: Rhagionidae: Spaniinae: Adult Oviposition Behavior and Changes in the Larval Mouthpart Morphology Accompanied with the Diet Shifts.

    Directory of Open Access Journals (Sweden)

    Yume Imada

    Full Text Available Dipteran larval morphology exhibits overwhelming variety, affected by their diverse feeding habits and habitat use. In particular, larval mouthpart morphology is associated with feeding behavior, providing key taxonomic traits. Despite most larval Brachycera being carnivorous, a basal brachyceran family, Rhagionidae, contains bryophyte-feeding taxa with multiple feeding habits. To elucidate the life history, biology, and morphological evolution of the bryophyte-feeding rhagionids, the larval feeding behavior and morphology, and the adult oviposition behavior of four species belonging to three genera of Spaniinae (Spania Meigen, Litoleptis Chillcott and Ptiolina Zetterstedt are described. Moreover, changes of the larval morphology associated with the evolution of bryophyte-feeding are traced by molecular phylogenetic analyses. Spania and Litoleptis (thallus-miners of thallose liverworts share a toothed form of apical mandibular sclerite with an orifice on its dorsal surface, which contrasts to those of the other members of Rhagionidae possessing a blade-like mandibular hook with an adoral groove; whereas, Ptiolina (stem borer of mosses exhibits a weak groove on the adoral surface of mandible and highly sclerotized maxilla with toothed projections. Based on the larval feeding behavior of the thallus-miners, it is inferred that the toothed mandibles with the dorsal orifice facilitate scraping plant tissue and then imbibing it with a great deal of the sap. A phylogeny indicated that the bryophyte-feeding genera formed a clade with Spaniopsis and was sister to Symphoromyia, which presumably are detritivores. This study indicates that the loss or reduction of adoral mandibular groove and mandibular brush is coincident with the evolution of bryophyte-feeding, and it is subsequently followed by the occurrence of dorsal mandibular orifice and the loss of creeping welts accompanying the evolution of thallus-mining.

  5. Herbarium of vascular plants collection of the university of extremadura (Spain).

    Science.gov (United States)

    Espinosa, Marta; López, Josefa

    2013-01-01

    The herbarium of University of Extremadura (UNEX Herbarium) is formed by 36451 specimens of vascular plants whose main origin is the autonomous region of Extremadura (Spain) and Portugal, although it also contains a smaller number of specimens from different places, including the rest of peninsular Spain, the Baleares Islands, the Macaronesian region (Canary Islands, Madeira and Azores), northwest of Africa (Morocco) and Brazil. 98% of the total records are georeferenced. It is an active collection in continuous growth. Its data can be accessed through the GBIF data portal at http://data.gbif.org/datasets/resource/255 and http://www.eweb.unex.es/eweb/botanica/herbario/. This paper describes the specimen associated data set of the UNEX Herbarium, with an objective to disseminate the data contained in a data set with potential users, and promote the multiple uses of the data.

  6. Florisitic summary of 'Manual of Vascular Plants of Northeastern United States and Adjacent Canada', second edition

    Science.gov (United States)

    Bennett, J.P.

    1996-01-01

    The second edition of the Manual of Vascular Plants of Northeastern United States and Adjacent Canada by Gleason and Cronquist (1991) is the most recent and up-to-date taxonomic treatment of the flora of that region. Since no floristic summary of the Manual was included in the publication, a computer analysis of the taxonomic data of the Manual was performed in order to generate a floristic summary. Totals of 4285 species, 1091 genera, and 191 families were tabulated. The largest genus was Carex, with 230 species; the largest family was the Asteraceae, with 528 species. Comparisons made with earlier floras of the same region indicated small declines on the order of 10% for these taxonomic groups.

  7. Compiled data on the vascular aquatic plant program, 1975 - 1977. [for sewage lagoon

    Science.gov (United States)

    Wolverton, B. C.; Mcdonald, R.

    1977-01-01

    The performance of a single cell, facultative sewage lagoon was significantly improved with the introduction of vascular aquatic plants. Water hyacinth (Eichhornia crassipes) was the dominant plant from April to November; duckweed (Lemna spp.) and (Spirodela spp.) flourished from December to March. This 2 ha lagoon received approximately 475 cu m/day of untreated sewage and has a variable COD sub 5 loading rate of 22-30 kg/ha/day. During the first 14 months of operation with aquatic plants, the average influent BOD sub 5 was reduced by 95% from 110 mg/l to an average of 5 mg/l in the effluent. The average influent suspended solids were reduced by 90% from 97 mg/l to 10 mg/l in the effluent. Significant reductions in nitrogen and phosphorus were effected. The monthly kjeldahl nitrogen for influent and effluent averaged 12.0 and 3.4 mg/l, respectively, a reduction of 72%. The total phosphorus was reduced on an average of 56% from 3.7 mg/l influent to 1.6 mg/l effluent.

  8. Dynamic analysis on cavitation and embolization in vascular plants under tension

    Science.gov (United States)

    Ryu, Jeongeun; Hwang, Bae Geun; Kim, Yangmin; Lee, Sang Joon

    2014-11-01

    Plants can transport sap water from the soil to the tip of their leaves using the tensile forces created by leaf transpiration without any mechanical pumps. However, the high tension adversely induces a thermodynamically metastable state in sap water with negative pressure and gas bubbles are prone to be formed in xylem vessels. Cavitation easily breaks down continuous water columns and grows into embolization, which limits water transport through xylem vessels. Meanwhile, the repair process of embolization is closely related to water management and regulation of sap flow in plants. In this study, the cavitation and embolization phenomena of liquid water in vascular plants and a physical model system are experimentally and theoretically investigated in detail under in vivo and in vitro conditions. This study will not only shed light on the understanding of these multiphase flows under tension but also provide a clue to solve cavitation problems in micro-scale conduits and microfluidic network systems. This work was supported by the National Research Foundation of Korea (NRF) grant funded by the Korea government (MSIP) (No. 2008-0061991).

  9. Further studies on the effect of sulfur dioxide on lichens and bryophytes

    Energy Technology Data Exchange (ETDEWEB)

    Gilbert, O L

    1970-01-01

    After comparing sixteen aspects of their biology it is clear that despite wide differences in botanical affinity bryophytes and lichens are outstandingly similar in their response to SO/sub 2/. This suggests that these lower plants can only colonize inhospitable habitats by adaptations which carry with them an inherent susceptibility to air pollution. Extensive laboratory and field work has emphasized the controlling influence of habitat on the survival of species. Among the strongest modifying influences are shelter, the pH and buffer capacity of the substratum and nutrient flushing. There is an apparent connection between survival and age of substratum. Water relations were found to have little effect. The extreme sensitivity of most epiphytes and the problems raised by resistant species are discussed. 34 references, 5 figures, 7 tables.

  10. Moss and liverwort xyloglucans contain galacturonic acid and are structurally distinct from the xyloglucans synthesized by hornworts and vascular plants.

    Science.gov (United States)

    Peña, Maria J; Darvill, Alan G; Eberhard, Stefan; York, William S; O'Neill, Malcolm A

    2008-11-01

    Xyloglucan is a well-characterized hemicellulosic polysaccharide that is present in the cell walls of all seed-bearing plants. The cell walls of avascular and seedless vascular plants are also believed to contain xyloglucan. However, these xyloglucans have not been structurally characterized. This lack of information is an impediment to understanding changes in xyloglucan structure that occurred during land plant evolution. In this study, xyloglucans were isolated from the walls of avascular (liverworts, mosses, and hornworts) and seedless vascular plants (club and spike mosses and ferns and fern allies). Each xyloglucan was fragmented with a xyloglucan-specific endo-glucanase and the resulting oligosaccharides then structurally characterized using NMR spectroscopy, MALDI-TOF and electrospray mass spectrometry, and glycosyl-linkage and glycosyl residue composition analyses. Our data show that xyloglucan is present in the cell walls of all major divisions of land plants and that these xyloglucans have several common structural motifs. However, these polysaccharides are not identical because specific plant groups synthesize xyloglucans with unique structural motifs. For example, the moss Physcomitrella patens and the liverwort Marchantia polymorpha synthesize XXGGG- and XXGG-type xyloglucans, respectively, with sidechains that contain a beta-D-galactosyluronic acid and a branched xylosyl residue. By contrast, hornworts synthesize XXXG-type xyloglucans that are structurally homologous to the xyloglucans synthesized by many seed-bearing and seedless vascular plants. Our results increase our understanding of the evolution, diversity, and function of structural motifs in land-plant xyloglucans and provide support to the proposal that hornworts are sisters to the vascular plants.

  11. Do oxygen stable isotopes track precipitation moisture source in vascular plant dominated peatlands?

    Science.gov (United States)

    Charman, D.; Amesbury, M. J.; Newnham, R.; Loader, N.; Goodrich, J. P.; Gallego-Sala, A. V.; Royles, J.; Keller, E. D.; Baisden, W. T.

    2014-12-01

    Variations in the isotopic composition of precipitation are determined by fractionation processes which occur during temperature and humidity dependent phase changes associated with evaporation and condensation. Oxygen stable isotope ratios have therefore been frequently used as a source of palaeoclimate data from a variety of proxy archives. Exploitation of this record from ombrotrophic peatlands, where the source water used in cellulose synthesis is derived solely from precipitation, has been mostly limited to Northern Hemisphere Sphagnum-dominated bogs, with limited application in the Southern Hemisphere (SH) or in peatlands dominated by vascular plants. Throughout New Zealand (NZ), the preserved root matrix of the restionaceous wire rush (Empodisma spp.) forms deep peat deposits. NZ provides an ideal location to undertake empirical research into oxygen isotope fractionation in vascular peatlands because sites are ideally suited to single taxon analysis, preserve potentially high resolution full Holocene palaeoclimate records and are situated in the climatically sensitive SH mid-latitudes. Crucially, large gradients exist in the mean isotopic composition of precipitation across NZ, caused primarily by the relative influence of different climate modes. We test the capacity for δ18O analysis of Empodisma alpha cellulose from ombrotrophic restiad peatlands in NZ to provide a methodology for developing palaeoclimate records. We took surface plant, water and precipitation samples over spatial (six sites spanning >10° latitude) and temporal (monthly measurements over one year) gradients. We found a strong link between the isotopic compositions of surface root water, the most likely source water for plant growth, and precipitation in both datasets. Back-trajectory modelling of precipitation moisture source for rain days prior to sampling showed clear seasonality in the temporal data that was reflected in surface root water. The link between source water and plant

  12. Identification of the vascular plants of Churchill, Manitoba, using a DNA barcode library

    Directory of Open Access Journals (Sweden)

    Kuzmina Maria L

    2012-11-01

    Full Text Available Abstract Background Because arctic plant communities are highly vulnerable to climate change, shifts in their composition require rapid, accurate identifications, often for specimens that lack diagnostic floral characters. The present study examines the role that DNA barcoding can play in aiding floristic evaluations in the arctic by testing the effectiveness of the core plant barcode regions (rbcL, matK and a supplemental ribosomal DNA (ITS2 marker for a well-studied flora near Churchill, Manitoba. Results This investigation examined 900 specimens representing 312 of the 354 species of vascular plants known from Churchill. Sequencing success was high for rbcL: 95% for fresh specimens and 85% for herbarium samples (mean age 20 years. ITS2 worked equally well for the fresh and herbarium material (89% and 88%. However, sequencing success was lower for matK, despite two rounds of PCR amplification, which reflected less effective primer binding and sensitivity to the DNA degradation (76% of fresh, 45% of herbaria samples. A species was considered as taxonomically resolved if its members showed at least one diagnostic difference from any other taxon in the study and formed a monophyletic clade. The highest species resolution (69% was obtained by combining information from all three genes. The joint sequence information for rbcL and matK distinguished 54% of 286 species, while rbcL and ITS2 distinguished 63% of 285 species. Discrimination of species within Salix, which constituted 8% of the flora, was particularly problematic. Despite incomplete resolution, the barcode results revealed 22 misidentified herbarium specimens, and enabled the identification of field specimens which were otherwise too immature to identify. Although seven cases of ITS2 paralogy were noted in the families Cyperaceae, Juncaceae and Juncaginaceae, this intergenic spacer played an important role in resolving congeneric plant species at Churchill. Conclusions Our results

  13. Identification of the vascular plants of Churchill, Manitoba, using a DNA barcode library.

    Science.gov (United States)

    Kuzmina, Maria L; Johnson, Karen L; Barron, Hannah R; Hebert, Paul Dn

    2012-11-28

    Because arctic plant communities are highly vulnerable to climate change, shifts in their composition require rapid, accurate identifications, often for specimens that lack diagnostic floral characters. The present study examines the role that DNA barcoding can play in aiding floristic evaluations in the arctic by testing the effectiveness of the core plant barcode regions (rbcL, matK) and a supplemental ribosomal DNA (ITS2) marker for a well-studied flora near Churchill, Manitoba. This investigation examined 900 specimens representing 312 of the 354 species of vascular plants known from Churchill. Sequencing success was high for rbcL: 95% for fresh specimens and 85% for herbarium samples (mean age 20 years). ITS2 worked equally well for the fresh and herbarium material (89% and 88%). However, sequencing success was lower for matK, despite two rounds of PCR amplification, which reflected less effective primer binding and sensitivity to the DNA degradation (76% of fresh, 45% of herbaria samples). A species was considered as taxonomically resolved if its members showed at least one diagnostic difference from any other taxon in the study and formed a monophyletic clade. The highest species resolution (69%) was obtained by combining information from all three genes. The joint sequence information for rbcL and matK distinguished 54% of 286 species, while rbcL and ITS2 distinguished 63% of 285 species. Discrimination of species within Salix, which constituted 8% of the flora, was particularly problematic. Despite incomplete resolution, the barcode results revealed 22 misidentified herbarium specimens, and enabled the identification of field specimens which were otherwise too immature to identify. Although seven cases of ITS2 paralogy were noted in the families Cyperaceae, Juncaceae and Juncaginaceae, this intergenic spacer played an important role in resolving congeneric plant species at Churchill. Our results provided fast and cost-effective solution to create a

  14. Linear-motion tattoo machine and prefabricated needle sets for the delivery of plant viruses by vascular puncture inoculation

    Science.gov (United States)

    Vascular puncture inoculation (VPI) of plant viruses previously has been conducted either manually or by use of a commercial engraving tool and laboratory-fabricated needle arrays. In an effort to improve this technique, a linear-motion tattoo machine driving industry-standard needle arrays was tes...

  15. Fifty-five new records of vascular plants, and other discoveries for the flora of Santa Catarina, southern Brazil

    DEFF Research Database (Denmark)

    Funez, Luís A.; Hassemer, Gustavo; Ferreira, João Paulo R.

    2017-01-01

    The flora of Santa Catarina is the best known in Brazil, and yet considerable knowledge gaps remain. Aiming at filling these gaps, we present here 55 new records of vascular plants for this Brazilian state, and the re-collection of four species after more than 50 years. About 50% of new records...

  16. Germination, survival and growth of three vascular plants on biological soil crusts from a Mexican tropical desert.

    Science.gov (United States)

    Godínez-Alvarez, H; Morín, C; Rivera-Aguilar, V

    2012-01-01

    Information about the effects of biological soil crusts (BSC) on germination, seedling survival and growth of vascular plants is controversial because they can have positive, neutral or negative effects. This controversy may be because most studies conducted until now have just analysed one or two recruitment stages independently. To understand the BSC effects on vascular plants, it is necessary to consider each stage of the recruitment process and synthesise all this information. The goal of this study was twofold. First, we analyse germination, seedling survival and growth of three vascular plants (Agave marmorata, Prosopis laevigata and Neobuxbaumia tetetzo) on BSC (cyanobacteria and mixed crust) from a tropical desert region of south-central México. Second, we synthesise the information to determine the total effect of BSC on plant species performance. We conducted experiments under controlled conditions to evaluate the proportion of germinated seeds, proportion of surviving seedlings and seedling dry weight in BSC and bare soil. Results showed that BSC have different effects on germination, seedling survival and growth of plant species. Plant species performance was qualitatively higher on BSC than bare soil. The highest performance of A. marmorata and P. laevigata was observed on cyanobacteria and mixed crusts, respectively. The highest performance of N. tetetzo was on both crust types. © 2011 German Botanical Society and The Royal Botanical Society of the Netherlands.

  17. Soft X-ray induced chemical modification of polysaccharides in vascular plant cell walls

    International Nuclear Information System (INIS)

    Cody, George D.; Brandes, Jay; Jacobsen, Chris; Wirick, Susan

    2009-01-01

    Scanning transmission X-ray microscopy and micro carbon X-ray Absorption Near Edge Spectroscopy (C-XANES) can provide quantitative information regarding the distribution of the biopolymers cellulose, hemicellulose, and lignin in vascular plant cell walls. In the case of angiosperms, flowering plants, C-XANES may also be able to distinguish variations in lignin monomer distributions throughout the cell wall. Polysaccharides are susceptible to soft X-ray irradiation induced chemical transformations that may complicate spectral analysis. The stability of a model polysaccharide, cellulose acetate, to variable doses of soft X-rays under conditions optimized for high quality C-XANES spectroscopy was investigated. The primary chemical effect of soft X-ray irradiation on cellulose acetate involves mass loss coincident with de-acetylation. A lesser amount of vinyl ketone formation also occurs. Reduction in irradiation dose via defocusing does enable high quality pristine spectra to be obtained. Radiation induced chemical modification studies of oak cell wall reveals that cellulose and hemicellulose are less labile to chemical modification than cellulose acetate. Strategies for obtaining pristine C-XANES spectra of polysaccharides are presented.

  18. Predicting Vascular Plant Diversity in Anthropogenic Peatlands: Comparison of Modeling Methods with Free Satellite Data

    Directory of Open Access Journals (Sweden)

    Ivan Castillo-Riffart

    2017-07-01

    Full Text Available Peatlands are ecosystems of great relevance, because they have an important number of ecological functions that provide many services to mankind. However, studies focusing on plant diversity, addressed from the remote sensing perspective, are still scarce in these environments. In the present study, predictions of vascular plant richness and diversity were performed in three anthropogenic peatlands on Chiloé Island, Chile, using free satellite data from the sensors OLI, ASTER, and MSI. Also, we compared the suitability of these sensors using two modeling methods: random forest (RF and the generalized linear model (GLM. As predictors for the empirical models, we used the spectral bands, vegetation indices and textural metrics. Variable importance was estimated using recursive feature elimination (RFE. Fourteen out of the 17 predictors chosen by RFE were textural metrics, demonstrating the importance of the spatial context to predict species richness and diversity. Non-significant differences were found between the algorithms; however, the GLM models often showed slightly better results than the RF. Predictions obtained by the different satellite sensors did not show significant differences; nevertheless, the best models were obtained with ASTER (richness: R2 = 0.62 and %RMSE = 17.2, diversity: R2 = 0.71 and %RMSE = 20.2, obtained with RF and GLM respectively, followed by OLI and MSI. Diversity obtained higher accuracies than richness; nonetheless, accurate predictions were achieved for both, demonstrating the potential of free satellite data for the prediction of relevant community characteristics in anthropogenic peatland ecosystems.

  19. Effects of reindeer density on vascular plant diversity on North Scandinavian mountains

    Directory of Open Access Journals (Sweden)

    Johan Olofsson

    2005-04-01

    Full Text Available We studied the effects of reindeer grazing on species richness and diversity of vascular plants on dolomite influenced low alpine sites in the species rich northern part of the Scandes using 8 sites with different reindeer densities. Two sites were situated inside Malla Strict Nature Reserve, where reindeer grazing have been totally prohibited since 1981, and strongly restricted since 1950s. The six other sites were located in other species rich hotspot sites standardized to be as similar to the dolomite-influenced sites in Malla Strict Reserve as possible but varying in reindeer densities commonly found in the Fennoscandian mountain chain. Each site with a habitat complex especially rich in rare vascular plants (the Dryas heath – low herb meadow complex was systematically sampled in four plots of 2 m x 10 m. The plots were divided to 20 squares of 1 m x 1 m, and complete species lists of vascular plants were compiled for each of the squares. The first DCA (detrended correspondence analysis axis was strongly related to an index of reindeer grazing, indicating that grazing has a strong impact on the composition of the vegetation. None of the characteristics indices of biodiversity (species richness, evenness or Shannon-Wiener H’ was correlated with reindeer density. The local abundances of categories consisting of relatively rare plants (Ca favored plants and red listed plants of Finland showed significant, positive correlation with the intensity of reindeer grazing. We conclude that even though the density of reindeer has no influence on the total species richness or diversity of vascular plants, reindeer may still be important for regional biodiversity as it seems to favour rare and threatened plants. Moreover, our results imply that standard diversity indices may have limited value in the context of conservation biology, as these indices are equally influenced by rarities and by trivial species.Abstract in Swedish / Sammandrag: Vi

  20. Northward invading non-native vascular plant species in and adjacent to Wood Buffalo National Park

    Energy Technology Data Exchange (ETDEWEB)

    Wein, R.W.; Wein, G.; Bahret, S.; Cody, W.J. (Alberta University, Edmonton, AB (Canada). Canadian Circumpolar Institute)

    A survey of the non-native vascular plant species in Wood Buffalo National Park, Canada's largest forested National Park, documented their presence and abundance in key locations. Most of the fifty-four species (nine new records) were found in disturbed sites including roadsides, settlements, farms, areas of altered hydrological regimes, recent bums, and intensive bison grazing. Species that have increased most in geographic area and abundance in recent years include [ital Agropyron repens], [ital Bromus inermis], [ital Chenopodium album], [ital Melilotus spp.], [ital Trifolium spp.], [ital Plantago major], [ital Achillea millefolium], [ital Crepis tectorum] and [ital Sonchus arvensis]. An additional 20 species, now common in the Peace River and Fort Vermilion areas, have the potential to invade the Park if plant communities are subjected to additional stress as northern climates are modified by the greenhouse effect and as other human-caused activities disturb the vegetation. It is recommended that permanent plots be located in key locations and monitored for species invasion and changing abundances as input to management plans.

  1. Ethnobotany of food plants in the high river Ter valley (Pyrenees, Catalonia, Iberian Peninsula): non-crop food vascular plants and crop food plants with medicinal properties.

    Science.gov (United States)

    Rigat, Montse; Bonet, Maria Àngels; Garcia, Sònia; Garnatje, Teresa; Vallès, Joan

    2009-01-01

    The present study reports a part of the findings of an ethnobotanical research project conducted in the Catalan region of the high river Ter valley (Iberian Peninsula), concerning the use of wild vascular plants as food and the medicinal uses of both wild and cultivated food plants. We have detected 100 species which are or have been consumed in this region, 83 of which are treated here (the remaining are the cultivated food plants without additional medicinal uses). Some of them, such as Achillea ptarmica subsp. pyrenaica, Convolvulus arvensis, Leontodon hispidus, Molopospermum peloponnesiacum and Taraxacum dissectum, have not been previously reported, or have only very rarely been cited or indicated as plant foods in very restricted geographical areas. Several of these edible wild plants have a therapeutic use attributed to them by local people, making them a kind of functional food. They are usually eaten raw, dressed in salads or cooked; the elaboration of products from these species such as liquors or marmalades is a common practice in the region. The consumption of these resources is still fairly alive in popular practice, as is the existence of homegardens, where many of these plants are cultivated for private consumption.

  2. Species richness and distribution of understorey bryophytes in different forest types in Colombian Amazonia

    NARCIS (Netherlands)

    Benavides, J.C.; Duque, A.J.; Duivenvoorden, J.F.; Cleef, A.M.

    2006-01-01

    The first bryophyte survey results from Colombian Amazonia are presented. Bryophyte species, differentiated into mosses and liverworts, and further into four life-form classes, were sampled in 0.1-ha plots. These plots were distributed over four landscape units in the middle Caquetá area:

  3. Vascular Plant and Vertebrate Inventory of Saguaro National Park, Tucson Mountain District

    Science.gov (United States)

    Powell, Brian F.; Halvorson, William L.; Schmidt, Cecilia A.

    2007-01-01

    This report summarizes the results of the first comprehensive inventory of plants and vertebrates at the Tucson Mountain District (TMD) of Saguaro National Park, Arizona. From 2001 to 2003 we surveyed for vascular plants and vertebrates (amphibians, reptiles, birds, and mammals) at the district to document the presence of species within its boundaries. Park staff also carried out extensive infrared-triggered camera work for medium and large mammals from 2002-2005 and results from that effort are reported here. Our spatial sampling design for all taxa employed a combination of random and nonrandom survey sites. Survey effort was greatest for medium and large mammals and herpetofauna. Because we used repeatable study designs and standardized field methods, these inventories can serve as the first step in a biological monitoring program for the district. We also provide an overview of previous survey efforts in the district. We use data from our inventory and other surveys to compile species lists and to assess inventory completeness. The survey effort for herpetofauna, birds, and medium and large mammals was the most comprehensive ever undertaken in the district. We recorded a total of 320 plant and vertebrate species, including 21 species not previously found in the district (Table 1). Based on a review of our inventory and past research at the district, there have been a total of 723 species of plants and vertebrates found there. We believe inventories for most taxonomic groups are nearly complete. Based on our surveys, we believe the native plant and vertebrate community compositions of the district are relatively intact, though some species loss has occurred and threats are increasing, particularly to herpetofauna and larger mammals. Of particular note is the relatively small number of non-native species and their low abundance in the district, which is in contrast to many nearby natural areas. Rapidly expanding development on the west, north, and east sides of

  4. Origin and Evolution of The Early- Silurian Land Vascular Plants: Evidence From Biomarkers

    Science.gov (United States)

    Jin, R.

    2016-12-01

    Origin and early evolution of land vascular plants, is one of the most intriguing hotspots in the life science research. During the 1970s and 1980s,Pinnatiramosus qianensis was found in early-Silurian strata in guizhou of south China.43 years have passed. But so far, the biological characteristics and belonging of the age of this unique plant have been debated again and again, up in the air.Biomarkers have a good stability in the process of organic evolution, no more or less changed, so they have a special `function of mark'. While biomarkers can provide information about organic matter of hydrocarbon source rock (the source), the period of deposition and burial (diagenesis) environmental conditions, and many other aspects of information.This paper obtained the sedimentary environment, source of organic matter input and other relevant information, through extracting and analyzing biomarkers of the 26 samples in the late Ordovician to early Silurian strata in NorthGuizhou areas. According to the results, Pr/Ph of late Ordovician Meitan Fm-early Silurian Hanjiadian Fm is high.It manifests more pristane, characterized by reductive environment. At the bottom of the Hanjiadian Fm, Pr/Ph has a volatility.Some huge environmental changes may have taken place in the corresponding period. N-alkanes do not have parity advantage or has even carbon advantage slightly.The peak carbon is mainly in low carbon number.(C21 + C22)/(C28 + C29) is high.Aquatic organisms is a major source of organic matter during this period,C21-/C22+ is low.This may be caused by the relatively serious loss of light hydrocarbon during the separation of components. In the Hanjiadian Fm,information of C29/C27 sterane ratios and oleanane index showed a trend of rising at the same time, indicating that during this period, there was a gradual increase input in the number of higher plants.The stable carbon isotope of saturated hydrocarbon and aromatic hydrocarbon in the Hanjiadian Fm also gradually become

  5. Mosses in Ohio wetlands respond to indices of disturbance and vascular plant integrity

    Science.gov (United States)

    Stapanian, Martin A.; Schumacher, William; Gara, Brian; Viau, Nick

    2016-01-01

    We examined the relationships between an index of wetland habitat quality and disturbance (ORAM score) and an index of vascular plant integrity (VIBI-FQ score) with moss species richness and a moss quality assessment index (MQAI) in 45 wetlands in three vegetation types in Ohio, USA. Species richness of mosses and MQAI were positively associated with ORAM and VIBI-FQ scores. VIBI-FQ score was a better predictor of both moss species richness and MQAI than was either ORAM score or vegetation type. This result was consistent with the strict microhabitat requirements for many moss species, which may be better assessed by VIBI-FQ than ORAM. Probability curves as a function of VIBI-FQ score were then generated for presence of groups of moss species having the same degree of fidelity to substrate and plant communities relative to other species in the moss flora (coefficients of conservatism, CCs). Species having an intermediate- or high degree of fidelity to substrate and plant communities (i.e., species with CC ≥ 5) had a 50% probability of presence (P50) and 90% probability of presence (P90) in wetlands with intermediate- and high VIBI-FQ scores, respectively. Although moss species richness, probability of presence of species based on CC, and MQAI may reflect wetland habitat quality, the 95% confidence intervals around P50 and P90 values may be too wide for regulatory use. Moss species richness, MQAI, and presence of groups of mosses may be more useful for evaluating moss habitat quality in wetlands than a set of “indicator species.”

  6. Is the tier-1 effect assessment for herbicides protective for aquatic algae and vascular plant communities?

    Science.gov (United States)

    van Wijngaarden, René P A; Arts, Gertie H P

    2018-01-01

    In the aquatic tier-1 effect assessment for plant protection products with an herbicidal mode of action in Europe, it is usually algae and/or vascular plants that determine the environmental risks. This tier includes tests with at least 2 algae and 1 macrophyte (Lemna). Although such tests are considered to be of a chronic nature (based on the duration of the test in relation to the life cycle of the organism), the measurement endpoints derived from the laboratory tests with plants (including algae) and used in the first-tier effect assessment for herbicides are acute effect concentrations affecting 50% of the test organisms (EC50 values) and not no-observed-effect concentrations (NOECs) or effect concentrations affecting 10% of the test organisms (EC10) values. Other European legislative frameworks (e.g., the Water Framework Directive) use EC10 values. The present study contributes to a validation of the tiered herbicide risk assessment approach by comparing the standard first-tier effect assessment with results of microcosm and mesocosm studies. We evaluated EC50 and EC10 values for standard test algae and macrophytes based on either the growth rate endpoint (E r C50) or the lowest available endpoint for growth rate or biomass/yield (E r /E y C50). These values were compared with the regulatory acceptable concentrations for the threshold option as derived from microcosm and mesocosm studies. For these studies, protection is maintained if growth rate is taken as the regulatory endpoint instead of the lowest value of either growth rate or biomass/yield in conjunction with the standard assessment factor of 10. Based on a limited data set of 14 herbicides, we did not identify a need to change the current practice. Environ Toxicol Chem 2018;37:175-183. © 2017 SETAC. © 2017 SETAC.

  7. Disentangling environmental correlates of vascular plant biodiversity in a Mediterranean hotspot.

    Science.gov (United States)

    Molina-Venegas, Rafael; Aparicio, Abelardo; Pina, Francisco José; Valdés, Benito; Arroyo, Juan

    2013-10-01

    We determined the environmental correlates of vascular plant biodiversity in the Baetic-Rifan region, a plant biodiversity hotspot in the western Mediterranean. A catalog of the whole flora of Andalusia and northern Morocco, the region that includes most of the Baetic-Rifan complex, was compiled using recent comprehensive floristic catalogs. Hierarchical cluster analysis (HCA) and detrended correspondence analysis (DCA) of the different ecoregions of Andalusia and northern Morocco were conducted to determine their floristic affinities. Diversity patterns were studied further by focusing on regional endemic taxa. Endemic and nonendemic alpha diversities were regressed to several environmental variables. Finally, semi-partial regressions on distance matrices were conducted to extract the respective contributions of climatic, altitudinal, lithological, and geographical distance matrices to beta diversity in endemic and nonendemic taxa. We found that West Rifan plant assemblages had more similarities with Andalusian ecoregions than with other nearby northern Morocco ecoregions. The endemic alpha diversity was explained relatively well by the environmental variables related to summer drought and extreme temperature values. Of all the variables, geographical distance contributed by far the most to spatial turnover in species diversity in the Baetic-Rifan hotspot. In the Baetic range, elevation was the most significant driver of nonendemic species beta diversity, while lithology and elevation were the main drivers of endemic beta diversity. Despite the fact that Andalusia and northern Morocco are presently separated by the Atlantic Ocean and the Mediterranean Sea, the Baetic and Rifan mountain ranges have many floristic similarities - especially in their western ranges - due to past migration of species across the Strait of Gibraltar. Climatic variables could be shaping the spatial distribution of endemic species richness throughout the Baetic-Rifan hotspot. Determinants

  8. Large-scale proteome comparative analysis of developing rhizomes of the ancient vascular plant Equisetum hyemale.

    Directory of Open Access Journals (Sweden)

    Tiago Santana Balbuena

    2012-06-01

    Full Text Available Equisetum hyemale is a widespread vascular plant species, whose reproduction is mainly dependent on the growth and development of the rhizomes. Due to its key evolutionary position, the identification of factors that could be involved in the existence of the rhizomatous trait may contribute to a better understanding of the role of this underground organ for the successful propagation of this and other plant species. In the present work, we characterized the proteome of E. hyemale rhizomes using a GeLC-MS spectral-counting proteomics strategy. A total of 1,911 and 1,860 non-redundant proteins were identified in the rhizomes apical tip and elongation zone, respectively. Rhizome- characteristic proteins were determined by comparisons of the developing rhizome tissues to developing roots. A total of 87 proteins were found to be up-regulated in both E. hyemale rhizome tissues in relation to developing roots. Hierarchical clustering indicated a vast dynamic range in the expression of the 87 characteristic proteins and revealed, based on the expression profile, the existence of 9 major protein groups. Gene ontology analyses suggested an over-representation of the terms involved in macromolecular and protein biosynthetic processes, gene expression and nucleotide and protein binding functions. Spatial differences analysis between the rhizome apical tip and the elongation zone revealed that only eight proteins were up-regulated in the apical tip including RNA-binding proteins and an acyl carrier protein, as well as a KH-domain protein and a T-complex subunit; while only seven proteins were up-regulated in the elongation zone including phosphomannomutase, galactomannan galactosyltransferase, endoglucanase 10 and 25 and mannose-1-phosphate guanyltransferase subunits alpha and beta. This is the first large scale characterization of the proteome of a plant rhizome. Implications of the findings were discussed in relation to other underground organs and related

  9. Bryophyte extracts with activity against plant pathogenic fungi ...

    African Journals Online (AJOL)

    Three dose levels of five candidate extracts sprayed at three pre-infectional time intervals were compared under low and high inoculum pressures of the late blight, Phytophthora infestans, of tomatoes and powdery mildew, Blumeria graminis, of wheat. In general, extracts from B. trilobata and D. albicans showed better ...

  10. Vascular Plant and Vertebrate Inventory of Saguaro National Park, Rincon Mountain District

    Science.gov (United States)

    Powell, Brian F.; Halvorson, William Lee; Schmidt, Cecilia A.

    2006-01-01

    Executive Summary This report summarizes the results of the first comprehensive inventory of plants and vertebrates at the Rincon Mountain District (RMD) of Saguaro National Park, Arizona. From 2001 to 2003 we surveyed for vascular plants and vertebrates (amphibians, reptiles, birds, and mammals) at the district to document the presence of species within its boundaries. Park staff also surveyed for medium and large mammals using infrared-triggered cameras from 1999 to 2005. This report summarizes the methods and results of these two efforts. Our spatial sampling design was ambitious and was one of the first of its kind in the region to colocate study sites for vegetation and vertebrates using a stratified random design. We also chose the location of some study sites non-randomly in areas that we thought would have the highest species richness. Because we used repeatable study designs and standardized field methods, these inventories can serve as the first step in a biological monitoring program for the district. We also provide an important overview of most previous survey efforts in the district. We use data from our inventory and other surveys to compile species lists and to assess inventory completeness. With the exception of plants, our survey effort was the most comprehensive ever undertaken in the district. We recorded a total of 801 plant and vertebrate species, including 50 species not previously found in the district (Table 1) of which five (all plants) are non-native species. Based on a review of our inventory and past research at the district, there have been a total of 1,479 species of plants and vertebrates found there. We believe inventories for all taxonomic groups are nearly complete. In particular, the plant, amphibian and reptile, and mammal species lists are the most complete of any comparably large natural area of the 'sky island' region of southern Arizona and adjacent Mexico. For each taxon-specific chapter we discuss patterns of species

  11. Effects of bryophyte and lichen cover on permafrost soil temperature at large scale

    Directory of Open Access Journals (Sweden)

    P. Porada

    2016-09-01

    Full Text Available Bryophyte and lichen cover on the forest floor at high latitudes exerts an insulating effect on the ground. In this way, the cover decreases mean annual soil temperature and can protect permafrost soil. Climate change, however, may change bryophyte and lichen cover, with effects on the permafrost state and related carbon balance. It is, therefore, crucial to predict how the bryophyte and lichen cover will react to environmental change at the global scale. To date, current global land surface models contain only empirical representations of the bryophyte and lichen cover, which makes it impractical to predict the future state and function of bryophytes and lichens. For this reason, we integrate a process-based model of bryophyte and lichen growth into the global land surface model JSBACH (Jena Scheme for Biosphere–Atmosphere Coupling in Hamburg. The model simulates bryophyte and lichen cover on upland sites. Wetlands are not included. We take into account the dynamic nature of the thermal properties of the bryophyte and lichen cover and their relation to environmental factors. Subsequently, we compare simulations with and without bryophyte and lichen cover to quantify the insulating effect of the organisms on the soil. We find an average cooling effect of the bryophyte and lichen cover of 2.7 K on temperature in the topsoil for the region north of 50° N under the current climate. Locally, a cooling of up to 5.7 K may be reached. Moreover, we show that using a simple, empirical representation of the bryophyte and lichen cover without dynamic properties only results in an average cooling of around 0.5 K. This suggests that (a bryophytes and lichens have a significant impact on soil temperature in high-latitude ecosystems and (b a process-based description of their thermal properties is necessary for a realistic representation of the cooling effect. The advanced land surface scheme, including a dynamic bryophyte and lichen model, will

  12. Evolutionary aspects of non-cell-autonomous regulation in vascular plants: structural background and models to study

    Directory of Open Access Journals (Sweden)

    Anastasiia I. Evkaikina

    2014-02-01

    Full Text Available Plasmodesmata (PD serve for the exchange of information in form of miRNA, proteins and mRNA between adjacent cells in the course of plant development. This fundamental role of PD is well established in angiosperms but has not yet been traced back to the evolutionary ancient plant taxa where functional studies lag behind studies of PD structure and ontogenetic origin. There is convincing evidence that the ability to form secondary (post-cytokinesis PD, which can connect any adjacent cells, contrary to primary PD which form during cytokinesis and link only cells of the same lineage, appeared in the evolution of higher plants at least twice: in seed plants and in some representatives of the Lycopodiophyta. The (inability to form secondary PD is manifested in the symplastic organization of the shoot apical meristem (SAM which in most taxa of seedless vascular plants differs dramatically from that in seed plants. Lycopodiophyta appear to be suitable models to analyze the transport of developmental regulators via PD in SAMs with symplastic organization both different from, as well as analogous to, that in angiosperms, and to understand the evolutionary aspects of the role of this transport in the morphogenesis of vascular plant taxa.

  13. Aquatic vascular plants as handicraft: a case study in southern Brazil

    Directory of Open Access Journals (Sweden)

    Mabel R. Báez-Lizarazo

    2017-11-01

    Full Text Available ABSTRACT This study aimed to evaluate knowledge about and the usage and importance of aquatic vascular plants (AVPs in the production of handicrafts by communities on the north coast of the state of Rio Grande do Sul in southern Brazil. The snowball technique was employed to locate people who use and have knowledge regarding the use of AVPs for handicrafts. Data were collected through semi-structured interviews and guided tours with 35 interviewees who were involved in artisanal activity at the time of the study. The data were analyzed using the importance value (IV index and the consensus value for the forms of use (CMU. The Spearman correlation test (rs was employed to determine the correlations of each social variable with the knowledge variables, and Mann-Whitney U tests to verify whether men and women exhibited differences in knowledge. The interviewees cited 16 AVPs that were employed in 17 types of handicrafts, among which the four main species were Schoenoplectus californicus, Typha domingensis, T. latifolia and Androtrichum giganteum. Interviewee age, residence time on site and time working with handicrafts were the main social parameters that described the level of knowledge and use of AVPs. These AVPs reflect cultural knowledge and complement family incomes.

  14. UV-absorbing compounds in subarctic herbarium bryophytes

    Energy Technology Data Exchange (ETDEWEB)

    Huttunen, S. [Botany Division, Department of Biology, P.O. Box 3000, FIN-90 014 University of Oulu (Finland)]. E-mail: satu.huttunen@oulu.fi; Lappalainen, N.M. [Botany Division, Department of Biology, P.O. Box 3000, FIN-90 014 University of Oulu (Finland); Turunen, J. [Botany Division, Department of Biology, P.O. Box 3000, FIN-90 014 University of Oulu (Finland)

    2005-01-01

    The UV-B-absorbing compounds of herbarium specimens of 10 subarctic bryophyte species collected during the years 1926-1996 and available at the Botanical Museum, University of Oulu, were studied. We studied whether herbarium specimens reflect changes in the past radiation climate through their methanol-extractable compounds. The order of gametophytes based on the average amount of total compounds (sum of A{sub 280-320nm}) per mass from the lowest to the highest was Polytrichum commune, Pleurozium schreberi, Hylocomium splendens, Sphagnum angustifolium, Dicranum scoparium, Funaria hygrometrica, Sphagnum fuscum, Sphagnum warnstorfii, Sphagnum capillifolium and Polytrichastrum alpinum, and the amount of UV-B-absorbing compounds per specific surface area correlated with the summertime daily global radiation and latitude. P. alpinum, F. hygrometrica and three Sphagnum species seem to be good indicators for further studies. The amount of UV-B-absorbing compounds revealed no significant trends from the 1920s till the 1990s, with the exception of S. capillifolium, which showed a significant decreasing trend. - UV-B-absorbing compounds in subarctic herbarium bryophytes indicate the radiation climate of the collecting site and time.

  15. UV-absorbing compounds in subarctic herbarium bryophytes

    International Nuclear Information System (INIS)

    Huttunen, S.; Lappalainen, N.M.; Turunen, J.

    2005-01-01

    The UV-B-absorbing compounds of herbarium specimens of 10 subarctic bryophyte species collected during the years 1926-1996 and available at the Botanical Museum, University of Oulu, were studied. We studied whether herbarium specimens reflect changes in the past radiation climate through their methanol-extractable compounds. The order of gametophytes based on the average amount of total compounds (sum of A 280-320nm ) per mass from the lowest to the highest was Polytrichum commune, Pleurozium schreberi, Hylocomium splendens, Sphagnum angustifolium, Dicranum scoparium, Funaria hygrometrica, Sphagnum fuscum, Sphagnum warnstorfii, Sphagnum capillifolium and Polytrichastrum alpinum, and the amount of UV-B-absorbing compounds per specific surface area correlated with the summertime daily global radiation and latitude. P. alpinum, F. hygrometrica and three Sphagnum species seem to be good indicators for further studies. The amount of UV-B-absorbing compounds revealed no significant trends from the 1920s till the 1990s, with the exception of S. capillifolium, which showed a significant decreasing trend. - UV-B-absorbing compounds in subarctic herbarium bryophytes indicate the radiation climate of the collecting site and time

  16. The conservation value of karst dolines for vascular plants in woodland habitats of Hungary: refugia and climate change

    Directory of Open Access Journals (Sweden)

    Zoltán Bátori

    2014-01-01

    Full Text Available Limestone (karst surfaces in Hungary are rich in dolines, in which many endangered vascular plant species occur. To date, the majority of studies dealing with doline vegetation have focused on the local rather than the landscape level, without using comparative data from other areas. However, in this study we aimed to compare the vegetation pattern and species composition of dolines under different climate regimes of Hungary with regard to regional species pools. The fieldwork was carried out between 2005 and 2012. Twenty dolines were selected in the Mecsek Mountains (southern Hungary and nine dolines in the Aggtelek Karst area (northern Hungary. More than 900 vascular plants and more than 2000 plots were included in the study. The moving split window (MSW technique, nestedness analysis and principal coordinates analysis (PCoA were used to reveal the vegetation patterns in dolines. Although we found remarkable differences between the species composition of the two regions, dolines of both regions play a similar role in the preservation of different groups of species. Many plants, in particular mountain species, are restricted to the bottom of dolines where appropriate environmental conditions exist. In addition, depending on the doline geometry, many species of drier and warmer forests have colonized the upper slopes and rims. Thus, we can conclude that karst dolines of Hungary can be considered as reservoirs for many vascular plant species, therefore they are particularly important from a conservation point of view. Moreover, these dolines will likely become increasingly indispensable refugia for biodiversity under future global warming.

  17. Response of photosynthetic carbon gain to ecosystem retrogression of vascular plants and mosses in the boreal forest.

    Science.gov (United States)

    Bansal, Sheel; Nilsson, Marie-Charlotte; Wardle, David A

    2012-07-01

    In the long-term absence of rejuvenating disturbances, forest succession frequently proceeds from a maximal biomass phase to a retrogressive phase characterized by reduced nutrient availability [notably nitrogen (N) and phosphorus (P)] and net primary productivity. Few studies have considered how retrogression induces changes in ecophysiological responses associated with photosynthetic carbon (C) gain, and only for trees. We tested the hypothesis that retrogression would negatively impact photosynthetic C gain of four contrasting species, and that this impact would be greater for vascular plants (i.e., trees and shrubs) than for non-vascular plants (i.e., mosses). We used a 5,000-year-old chronosequence of forested islands in Sweden, where retrogression occurs in the long-term absence of lightning-ignited wildfires. Despite fundamental differences in plant form and ecological niche among species, vascular plants and mosses showed similar ecophysiological responses to retrogression. The most common effects of retrogression were reductions in photosynthesis and respiration per unit foliar N, increases in foliar N, δ(13)C and δ(15)N, and decreases in specific leaf areas. In contrast, photosynthesis per unit mass or area generally did not change along the chronosequence, but did vary many-fold between vascular plants and mosses. The consistent increases in foliar N without corresponding increases in mass- or area-based photosynthesis suggest that other factor(s), such as P co-limitation, light conditions or water availability, may co-regulate C gain in retrogressive boreal forests. Against our predictions, traits of mosses associated with C and N were generally highly responsive to retrogression, which has implications for how mosses influence ecosystem processes in boreal forests.

  18. Physiological, vascular and nanomechanical assessment of hybrid poplar leaf traits in micropropagated plants and plants propagated from root cuttings: A contribution to breeding programs.

    Science.gov (United States)

    Ďurkovič, Jaroslav; Husárová, Hana; Javoříková, Lucia; Čaňová, Ingrid; Šuleková, Miriama; Kardošová, Monika; Lukáčik, Ivan; Mamoňová, Miroslava; Lagaňa, Rastislav

    2017-09-01

    Micropropagated plants experience significant stress from rapid water loss when they are transferred from an in vitro culture to either greenhouse or field conditions. This is caused both by inefficient stomatal control of transpiration and the change to a higher light intensity and lower humidity. Understanding the physiological, vascular and biomechanical processes that allow micropropagated plants to modify their phenotype in response to environmental conditions can help to improve both field performance and plant survival. To identify changes between the hybrid poplar [Populus tremula × (Populus × canescens)] plants propagated from in vitro tissue culture and those from root cuttings, we assessed leaf performance for any differences in leaf growth, photosynthetic and vascular traits, and also nanomechanical properties of the tracheary element cell walls. The micropropagated plants showed significantly higher values for leaf area, leaf length, leaf width and leaf dry mass. The greater leaf area and leaf size dimensions resulted from the higher transpiration rate recorded for this stock type. Also, the micropropagated plants reached higher values for chlorophyll a fluorescence parameters and for the nanomechanical dissipation energy of tracheary element cell walls which may indicate a higher damping capacity within the primary xylem tissue under abiotic stress conditions. The performance of the plants propagated from root cuttings was superior for instantaneous water-use efficiency which signifies a higher acclimation capacity to stressful conditions during a severe drought particularly for this stock type. Similarities were found among the majority of the examined leaf traits for both vegetative plant origins including leaf mass per area, stomatal conductance, net photosynthetic rate, hydraulic axial conductivity, indicators of leaf midrib vascular architecture, as well as for the majority of cell wall nanomechanical traits. This research revealed that

  19. Vascular development of the grapevine (Vitis vinifera L.) inflorescence rachis in response to flower number, plant growth regulators and defoliation.

    Science.gov (United States)

    Gourieroux, Aude M; Holzapfel, Bruno P; McCully, Margaret E; Scollary, Geoffrey R; Rogiers, Suzy Y

    2017-09-01

    The grapevine inflorescence is a determinate panicle and as buds emerge, shoot, flower and rachis development occur simultaneously. The growth and architecture of the rachis is determined by genetic and environmental factors but here we examined the role of flower and leaf number as well as hormones on its elongation and vascular development. The consequences of rachis morphology and vascular area on berry size and composition were also assessed. One week prior to anthesis, Merlot and Cabernet Sauvignon field vines were exposed to manual flower removal, exogenous plant growth regulators or pre-bloom leaf removal. Manual removal of half the flowers along the vertical axis of the inflorescence resulted in a shorter rachis in both cultivars. Conversely, inflorescences treated with gibberellic acid (GA 3 ) and the synthetic cytokinin, 6-benzylaminopurine (BAP) resulted in a longer rachis while pre-bloom removal of all leaves on the inflorescence-bearing shoot did not alter rachis length relative to untreated inflorescences. Across the treatments, the cross-sectional areas of the conducting xylem and phloem in the rachis were positively correlated to rachis girth, flower number at anthesis, bunch berry number, bunch berry fresh mass and bunch sugar content at harvest. Conversely, average berry size and sugar content were not linked to rachis vascular area. These data indicate that the morphological and vascular development of the rachis was more responsive to flower number and plant growth regulators than to leaf removal.

  20. The "Martian" flora: new collections of vascular plants, lichens, fungi, algae, and cyanobacteria from the Mars Desert Research Station, Utah

    Science.gov (United States)

    Freebury, Colin E.; Hamilton, Paul B.; Saarela, Jeffery M.

    2016-01-01

    Abstract The Mars Desert Research Station is a Mars analog research site located in the desert outside of Hanksville, Utah, U.S.A. Here we present a preliminary checklist of the vascular plant and lichen flora for the station, based on collections made primarily during a two-week simulated Mars mission in November, 2014. Additionally, we present notes on the endolithic chlorophytes and cyanobacteria, and the identification of a fungal genus also based on these collections. Altogether, we recorded 38 vascular plant species from 14 families, 13 lichen species from seven families, six algae taxa including both chlorophytes and cyanobacteria, and one fungal genus from the station and surrounding area. We discuss this floristic diversity in the context of the ecology of the nearby San Rafael Swell and the desert areas of Wayne and Emery counties in southeastern Utah. PMID:27350765

  1. Vascular Plant and Vertebrate Inventory of Gila Cliff Dwellings National Monument

    Science.gov (United States)

    Powell, Brian F.; Albrecht, Eric W.; Halvorson, William L.; Schmidt, Cecilia A.; Docherty, Kathleen; Anning, Pamela

    2006-01-01

    Executive Summary This report summarizes the results of the first comprehensive biological inventory of Gila Cliff Dwellings National Monument (NM) in western New Mexico. This project was part of a larger effort to inventory plants and vertebrates in eight National Park Service units in Arizona and New Mexico. Our surveys address many of the objectives that were set forth in the monument's natural resource management plan almost 20 years ago, but until this effort, those goals were never accomplished. From 2001 to 2003 we surveyed for vascular plants and vertebrates (amphibians, reptiles, birds, and mammals) at Gila Cliff Dwellings NM to document presence of species within the boundaries of the monument. For all taxonomic groups that we studied, we collected 'incidental' sightings on U.S. Forest Service lands adjacent to the monument, and in a few cases we did formal surveys on those lands. Because we used repeatable study designs and standardized field techniques, these inventories can serve as the first step in a biological monitoring program for Gila Cliff Dwellings NM and surrounding lands. We recorded 552 species at Gila Cliff Dwellings NM and the surrounding lands (Table 1). We found no non-native species of reptiles, birds, or mammals, one non-native amphibian (American bullfrog), and 33 non-native plants. Particularly on lands adjacent to the monument we found that the American bullfrog was very abundant, which is a cause for significant management concern. Species of non-native plants that are of management concern include red brome, bufflegrass, and cheatgrass. For a park unit of its size and geographic location, we found the plant and vertebrate communities to be fairly diverse; for each taxonomic group we found representative species from a wide range of taxonomic orders and/or families. The monument's geographic location, with influences from the Rocky Mountain, Chihuahuan Desert, and Madrean ecological provinces, plays an important role in determining

  2. Revisiting the origin and diversification of vascular plants through a comprehensive Bayesian analysis of the fossil record.

    Science.gov (United States)

    Silvestro, Daniele; Cascales-Miñana, Borja; Bacon, Christine D; Antonelli, Alexandre

    2015-07-01

    Plants have a long evolutionary history, during which mass extinction events dramatically affected Earth's ecosystems and its biodiversity. The fossil record can shed light on the diversification dynamics of plant life and reveal how changes in the origination-extinction balance have contributed to shaping the current flora. We use a novel Bayesian approach to estimate origination and extinction rates in plants throughout their history. We focus on the effect of the 'Big Five' mass extinctions and on estimating the timing of origin of vascular plants, seed plants and angiosperms. Our analyses show that plant diversification is characterized by several shifts in origination and extinction rates, often matching the most important geological boundaries. The estimated origin of major plant clades predates the oldest macrofossils when considering the uncertainties associated with the fossil record and the preservation process. Our findings show that the commonly recognized mass extinctions have affected each plant group differently and that phases of high extinction often coincided with major floral turnovers. For instance, after the Cretaceous-Paleogene boundary we infer negligible shifts in diversification of nonflowering seed plants, but find significantly decreased extinction in spore-bearing plants and increased origination rates in angiosperms, contributing to their current ecological and evolutionary dominance. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  3. Gardening in the zone of death: an experimental assessment of the absolute elevation limit of vascular plants.

    Science.gov (United States)

    Dvorský, Miroslav; Chlumská, Zuzana; Altman, Jan; Čapková, Kateřina; Řeháková, Klára; Macek, Martin; Kopecký, Martin; Liancourt, Pierre; Doležal, Jiří

    2016-04-13

    Vascular plants in the western Tibetan Plateau reach 6000 m--the highest elevation on Earth. Due to the significant warming of the region, plant ranges are expected to shift upwards. However, factors governing maximum elevational limits of plant are unclear. To experimentally assess these factors, we transplanted 12 species from 5750 m to 5900 m (upper edge of vegetation) and 6100 m (beyond range) and monitored their survival for six years. In the first three years (2009-2012), there were plants surviving beyond the regional upper limit of vegetation. This supports the hypothesis of dispersal and/or recruitment limitation. Substantial warming, recorded in-situ during this period, very likely facilitated the survival. The survival was ecologically a non-random process, species better adapted to repeated soil freezing and thawing survived significantly better. No species have survived at 6100 m since 2013, probably due to the extreme snowfall in 2013. In conclusion, apart from the minimum heat requirements, our results show that episodic climatic events are decisive determinants of upper elevational limits of vascular plants.

  4. Divergence and adaptive evolution of the gibberellin oxidase genes in plants.

    Science.gov (United States)

    Huang, Yuan; Wang, Xi; Ge, Song; Rao, Guang-Yuan

    2015-09-29

    The important phytohormone gibberellins (GAs) play key roles in various developmental processes. GA oxidases (GAoxs) are critical enzymes in GA synthesis pathway, but their classification, evolutionary history and the forces driving the evolution of plant GAox genes remain poorly understood. This study provides the first large-scale evolutionary analysis of GAox genes in plants by using an extensive whole-genome dataset of 41 species, representing green algae, bryophytes, pteridophyte, and seed plants. We defined eight subfamilies under the GAox family, namely C19-GA2ox, C20-GA2ox, GA20ox,GA3ox, GAox-A, GAox-B, GAox-C and GAox-D. Of these, subfamilies GAox-A, GAox-B, GAox-C and GAox-D are described for the first time. On the basis of phylogenetic analyses and characteristic motifs of GAox genes, we demonstrated a rapid expansion and functional divergence of the GAox genes during the diversification of land plants. We also detected the subfamily-specific motifs and potential sites of some GAox genes, which might have evolved under positive selection. GAox genes originated very early-before the divergence of bryophytes and the vascular plants and the diversification of GAox genes is associated with the functional divergence and could be driven by positive selection. Our study not only provides information on the classification of GAox genes, but also facilitates the further functional characterization and analysis of GA oxidases.

  5. Evolution of heavy metal tolerance in bryophytes II. An ecological and experimental investigation of the copper moss, Scopelophila cataractae (Pottiaceae)

    Energy Technology Data Exchange (ETDEWEB)

    Shaw, J. (Duke Univ., Durham, NC (USA))

    1987-06-01

    About six bryophyte species (including both mosses and liverworts) are generally thought to be restricted to copper-enriched substrates and are consequently known as copper mosses. One of these, Scopelophila cataractae (Pottiaceae), is known from several sites in southern Arizona and occurs at six localities in the Eastern US. Chemical analyses of substrates from the eastern US localities showed that all but one population grew on copper-enriched soil. The one substrate sample low in copper was very high in iron. Plants from five of the six eastern US localities for S. cataractae were grown experimentally on four soil types ranging from highly to not contaminated, and all grew best on the soil contaminated with copper, lead, and zinc. There was no significant variation in growth between populations on the four soil treatments. This lack of population differentiation is in contrast to flowering plants and may be related to the absence of sexual reproduction in S. cataractae in North America.

  6. Genetic Diversity of Nostoc Symbionts Endophytically Associated with Two Bryophyte Species

    OpenAIRE

    Costa, José-Luis; Paulsrud, Per; Rikkinen, Jouko; Lindblad, Peter

    2001-01-01

    The diversity of the endophytic Nostoc symbionts of two thalloid bryophytes, the hornwort Anthoceros fusiformis and the liverwort Blasia pusilla, was examined using the tRNALeu (UAA) intron sequence as a marker. The results confirmed that many different Nostoc strains are involved in both associations under natural conditions in the field. The level of Nostoc diversity within individual bryophyte thalli varied, but single DNA fragments were consistently amplified from individual symbiotic col...

  7. Tourism and recreation listed as a threat for a wide diversity of vascular plants: a continental scale review.

    Science.gov (United States)

    Rankin, Benjamin Luke; Ballantyne, Mark; Pickering, Catherine Marina

    2015-05-01

    Tourism and recreation are diverse and popular activities. They may also contribute to the risk of extinction for some plants because of the range and severity of their impacts, including in protected areas: but which species, where and how? To evaluate the extent to which tourism and recreation may be threatening process for plants, we conducted a continental level review of listed threats to endangered vascular plants using data from Australia. Of the 659 vascular plant species listed as critically endangered or endangered by the Australian Government, tourism and recreation were listed as a threat(s) for 42%. This is more than those listed as threatened by climate change (26%) and close to the proportion listed as threatened by altered fire regimes (47%). There are plant species with tourism and recreation listed threats in all States and Territories and from all but one bioregion in Australia. Although more than 45 plant families have species with tourism and recreation listed as threats, orchids were the most common species listed as at risk from these threats (90 species). The most common types of threats listed were visitors collecting plants in protected areas (113 species), trampling by hikers and others (84 species), damage from recreational vehicles (59 species) and road infrastructure (39 species). Despite the frequency with which tourism and recreation were listed as threats in Australia, research quantifying these threats and methods to ameliorate their impacts are still limited. Although this lack of information contributes to the challenge of managing tourism and recreation, impacts from visitors will often be easier to manage within natural areas than those from larger scale threats such as altered fire regimes and climate change. Copyright © 2015 Elsevier Ltd. All rights reserved.

  8. Lichen and bryophyte distribution on oak in London in relation to air pollution and bark acidity

    International Nuclear Information System (INIS)

    Larsen, R.S.; Bell, J.N.B.; James, P.W.; Chimonides, P.J.; Rumsey, F.J.; Tremper, A.; Purvis, O.W.

    2007-01-01

    Epiphytic lichen and bryophyte distribution and frequency were investigated on the trunks of 145 young oak trees throughout London and surrounding counties, and compared with pollution levels and bark pH. Sixty-four lichen and four bryophyte species were recorded. Three major zones were identified: (i) two central regions with a few lichens, bryophytes absent; (ii) a surrounding region with a more diverse flora including a high cover of nitrophyte lichens; and (iii) an outer region, characterised by species absent from central London, including acidophytes. Nineteen species were correlated with nitrogen oxides and 16 with bark pH, suggesting that transport-related pollution and bark acidity influence lichen and bryophyte distribution in London today. Lichens and bryophytes are responding to factors that influence human and environmental health in London. Biomonitoring therefore has a practical role to assess the effects of measures to improve London's air quality. - Transport-related pollutants and bark acidity influence lichen and bryophyte distribution and abundance in London today

  9. Landscape scale controls on the vascular plant component of dissolved organic carbon across a freshwater delta

    Science.gov (United States)

    Eckard, Robert S.; Hernes, Peter J.; Bergamaschi, Brian A.; Stepanauskas, Ramunas; Kendall, Carol

    2007-01-01

    Lignin phenol concentrations and compositions were determined on dissolved organic carbon (DOC) extracts (XAD resins) within the Sacramento-San Joaquin River Delta (the Delta), the tidal freshwater portion of the San Francisco Bay Estuary, located in central California, USA. Fourteen stations were sampled, including the following habitats and land-use types: wetland, riverine, channelized waterway, open water, and island drains. Stations were sampled approximately seasonally from December, 1999 through May, 2001. DOC concentrations ranged from 1.3 mg L-1 within the Sacramento River to 39.9 mg L-1 at the outfall from an island drain (median 3.0 mg L-1), while lignin concentrations ranged from 3.0 μL-1 within the Sacramento River to 111 μL-1 at the outfall from an island drain (median 11.6 μL-1). Both DOC and lignin concentrations varied significantly among habitat/land-use types and among sampling stations. Carbon-normalized lignin yields ranged from 0.07 mg (100 mg OC)-1 at an island drain to 0.84 mg (100 mg OC)-1 for a wetland (median 0.36 mg (100 mg OC)-1), and also varied significantly among habitat/land-use types. A simple mass balance model indicated that the Delta acted as a source of lignin during late autumn through spring (10-83% increase) and a sink for lignin during summer and autumn (13-39% decrease). Endmember mixing models using S:V and C:V signatures of landscape scale features indicated strong temporal variation in sources of DOC export from the Delta, with riverine source signatures responsible for 50% of DOC in summer and winter, wetland signatures responsible for 40% of DOC in summer, winter, and late autumn, and island drains responsible for 40% of exported DOC in late autumn. A significant negative correlation was observed between carbon-normalized lignin yields and DOC bioavailability in two of the 14 sampling stations. This study is, to our knowledge, the first to describe organic vascular plant DOC sources at the level of localized

  10. Cavitation Resistance in Seedless Vascular Plants: The Structure and Function of Interconduit Pit Membranes1[W][OPEN

    Science.gov (United States)

    Brodersen, Craig; Jansen, Steven; Choat, Brendan; Rico, Christopher; Pittermann, Jarmila

    2014-01-01

    Plant water transport occurs through interconnected xylem conduits that are separated by partially digested regions in the cell wall known as pit membranes. These structures have a dual function. Their porous construction facilitates water movement between conduits while limiting the spread of air that may enter the conduits and render them dysfunctional during a drought. Pit membranes have been well studied in woody plants, but very little is known about their function in more ancient lineages such as seedless vascular plants. Here, we examine the relationships between conduit air seeding, pit hydraulic resistance, and pit anatomy in 10 species of ferns (pteridophytes) and two lycophytes. Air seeding pressures ranged from 0.8 ± 0.15 MPa (mean ± sd) in the hydric fern Athyrium filix-femina to 4.9 ± 0.94 MPa in Psilotum nudum, an epiphytic species. Notably, a positive correlation was found between conduit pit area and vulnerability to air seeding, suggesting that the rare-pit hypothesis explains air seeding in early-diverging lineages much as it does in many angiosperms. Pit area resistance was variable but averaged 54.6 MPa s m−1 across all surveyed pteridophytes. End walls contributed 52% to the overall transport resistance, similar to the 56% in angiosperm vessels and 64% in conifer tracheids. Taken together, our data imply that, irrespective of phylogenetic placement, selection acted on transport efficiency in seedless vascular plants and woody plants in equal measure by compensating for shorter conduits in tracheid-bearing plants with more permeable pit membranes. PMID:24777347

  11. Post-translational control of nitrate reductase activity responding to light and photosynthesis evolved already in the early vascular plants.

    Science.gov (United States)

    Nemie-Feyissa, Dugassa; Królicka, Adriana; Førland, Nina; Hansen, Margarita; Heidari, Behzad; Lillo, Cathrine

    2013-05-01

    Regulation of nitrate reductase (NR) by reversible phosphorylation at a conserved motif is well established in higher plants, and enables regulation of NR in response to rapid fluctuations in light intensity. This regulation is not conserved in algae NR, and we wished to test the evolutionary origin of the regulatory mechanism by physiological examination of ancient land plants. Especially a member of the lycophytes is of interest since their NR is candidate for regulation by reversible phosphorylation based on sequence analysis. We compared Selaginella kraussiana, a member of the lycophytes and earliest vascular plants, with the angiosperm Arabidopsis thaliana, and also tested the moss Physcomitrella patens. Interestingly, optimization of assay conditions revealed that S. kraussiana NR used NADH as an electron donor like A. thaliana, whereas P. patens NR activity depended on NADPH. Examination of light/darkness effects showed that S. kraussiana NR was rapidly regulated similar to A. thaliana NR when a differential (Mg(2+) contra EDTA) assay was used to reveal activity state of NR. This implies that already existing NR enzyme was post-translationally activated by light in both species. Light had a positive effect also on de novo synthesis of NR in S. kraussiana, which could be shown after the plants had been exposed to a prolonged dark period (7 days). Daily variations in NR activity were mainly caused by post-translational modifications. As for angiosperms, the post-translational light activation of NR in S. kraussiana was inhibited by 3-(3,4-dichlorophenyl)-1*1-dimethylurea (DCMU), an inhibitor of photosynthesis and stomata opening. Evolutionary, a post-translational control mechanism for NR have occurred before or in parallel with development of vascular tissue in land plants, and appears to be part of a complex mechanisms for coordination of CO2 and nitrogen metabolism in these plants. Copyright © 2013 Elsevier GmbH. All rights reserved.

  12. Herbarium of the university of malaga (Spain): vascular plants collection.

    Science.gov (United States)

    García-Sánchez, José; Cabezudo, Baltasar

    2013-01-01

    The herbarium of University of Málaga (MGC Herbarium) is formed by four biological collections. The vascular plants collection (MGC-Cormof) is the main collection of the herbarium. MGC-Cormof dataset aims to digitize and publish data associated with over 76.000 specimens deposited in the collection, of which 97.2% of the specimens are identified at species level. Since 2011, the University of Malaga's Central Research Service (SCAI) has been responsible for maintaining the herbariums and the dataset. The collection is growing continuously, with an annual intake of about 1.500 specimens. Nearly 96% of the collection is digitized, by Herbar v3.7.1 software (F. Pando et al. 1996-2011), making over 73.000 specimens accessible through the GBIF network (http://data.gbif.org/datasets/resource/8105/). At present, 247 families and 8.110 taxa, distributed in angiosperms (93.97%), ferns and fern allies (4.89%) and gymnosperms (1.14%), constitute the MGC-Cormof collection. The families and genera best represented in the collection are Compositae, Leguminosae, Gramineae, Labiatae, Caryophyllaceae, Teucrium, Silene, Asplenium, Linaria and Quercus. Most of the specimens are from the Western Mediterranean Region, fundamentally Southern Spain (Andalusia: 82% of specimens) and Northern Morocco (2.17%). Approximately, 63% of the specimens are georeferenced. The identification of the specimens in the collection has been carried out by the plant biology department at the University of Malaga and plus 40% of the specimens has been reviewed by experts. The MGC-Cormof dataset has been revised by DarwinTest v3.2 tool (Ortega-Maqueda and Pando 2008) before being published in GBIF. The data included in this database are important for conservation works, taxonomy, flora, cartography, phenology, palynology, among others. El Herbario de la Universidad de Málaga (Herbario MGC) está constituido por cuatro colecciones biológicas. La colección de plantas vasculares (MGC Cormof) es la colecci

  13. Using herbarium-derived DNAs to assemble a large-scale DNA barcode library for the vascular plants of Canada.

    Science.gov (United States)

    Kuzmina, Maria L; Braukmann, Thomas W A; Fazekas, Aron J; Graham, Sean W; Dewaard, Stephanie L; Rodrigues, Anuar; Bennett, Bruce A; Dickinson, Timothy A; Saarela, Jeffery M; Catling, Paul M; Newmaster, Steven G; Percy, Diana M; Fenneman, Erin; Lauron-Moreau, Aurélien; Ford, Bruce; Gillespie, Lynn; Subramanyam, Ragupathy; Whitton, Jeannette; Jennings, Linda; Metsger, Deborah; Warne, Connor P; Brown, Allison; Sears, Elizabeth; Dewaard, Jeremy R; Zakharov, Evgeny V; Hebert, Paul D N

    2017-12-01

    Constructing complete, accurate plant DNA barcode reference libraries can be logistically challenging for large-scale floras. Here we demonstrate the promise and challenges of using herbarium collections for building a DNA barcode reference library for the vascular plant flora of Canada. Our study examined 20,816 specimens representing 5076 of 5190 vascular plant species in Canada (98%). For 98% of the specimens, at least one of the DNA barcode regions was recovered from the plastid loci rbcL and matK and from the nuclear ITS2 region. We used beta regression to quantify the effects of age, type of preservation, and taxonomic affiliation (family) on DNA sequence recovery. Specimen age and method of preservation had significant effects on sequence recovery for all markers, but influenced some families more (e.g., Boraginaceae) than others (e.g., Asteraceae). Our DNA barcode library represents an unparalleled resource for metagenomic and ecological genetic research working on temperate and arctic biomes. An observed decline in sequence recovery with specimen age may be associated with poor primer matches, intragenomic variation (for ITS2), or inhibitory secondary compounds in some taxa.

  14. A primary survey on bryophyte species reveals two novel classes of nucleotide-binding site (NBS genes.

    Directory of Open Access Journals (Sweden)

    Jia-Yu Xue

    Full Text Available Due to their potential roles in pathogen defense, genes encoding nucleotide-binding site (NBS domain have been particularly surveyed in many angiosperm genomes. Two typical classes were found: one is the TIR-NBS-LRR (TNL class and the other is the CC-NBS-LRR (CNL class. It is seldom known, however, what kind of NBS-encoding genes are mainly present in other plant groups, especially the most ancient groups of land plants, that is, bryophytes. To fill this gap of knowledge, in this study, we mainly focused on two bryophyte species: the moss Physcomitrella patens and the liverwort Marchantia polymorpha, to survey their NBS-encoding genes. Surprisingly, two novel classes of NBS-encoding genes were discovered. The first novel class is identified from the P. patens genome and a typical member of this class has a protein kinase (PK domain at the N-terminus and a LRR domain at the C-terminus, forming a complete structure of PK-NBS-LRR (PNL, reminiscent of TNL and CNL classes in angiosperms. The second class is found from the liverwort genome and a typical member of this class possesses an α/β-hydrolase domain at the N-terminus and also a LRR domain at the C-terminus (Hydrolase-NBS-LRR, HNL. Analysis on intron positions and phases also confirmed the novelty of HNL and PNL classes, as reflected by their specific intron locations or phase characteristics. Phylogenetic analysis covering all four classes of NBS-encoding genes revealed a closer relationship among the HNL, PNL and TNL classes, suggesting the CNL class having a more divergent status from the others. The presence of specific introns highlights the chimerical structures of HNL, PNL and TNL genes, and implies their possible origin via exon-shuffling during the quick lineage separation processes of early land plants.

  15. Global transcriptome analysis reveals extensive gene remodeling, alternative splicing and differential transcription profiles in non-seed vascular plant Selaginella moellendorffii.

    Science.gov (United States)

    Zhu, Yan; Chen, Longxian; Zhang, Chengjun; Hao, Pei; Jing, Xinyun; Li, Xuan

    2017-01-25

    Selaginella moellendorffii, a lycophyte, is a model plant to study the early evolution and development of vascular plants. As the first and only sequenced lycophyte to date, the genome of S. moellendorffii revealed many conserved genes and pathways, as well as specialized genes different from flowering plants. Despite the progress made, little is known about long noncoding RNAs (lncRNA) and the alternative splicing (AS) of coding genes in S. moellendorffii. Its coding gene models have not been fully validated with transcriptome data. Furthermore, it remains important to understand whether the regulatory mechanisms similar to flowering plants are used, and how they operate in a non-seed primitive vascular plant. RNA-sequencing (RNA-seq) was performed for three S. moellendorffii tissues, root, stem, and leaf, by constructing strand-specific RNA-seq libraries from RNA purified using RiboMinus isolation protocol. A total of 176 million reads (44 Gbp) were obtained from three tissue types, and were mapped to S. moellendorffii genome. By comparing with 22,285 existing gene models of S. moellendorffii, we identified 7930 high-confidence novel coding genes (a 35.6% increase), and for the first time reported 4422 lncRNAs in a lycophyte. Further, we refined 2461 (11.0%) of existing gene models, and identified 11,030 AS events (for 5957 coding genes) revealed for the first time for lycophytes. Tissue-specific gene expression with functional implication was analyzed, and 1031, 554, and 269 coding genes, and 174, 39, and 17 lncRNAs were identified in root, stem, and leaf tissues, respectively. The expression of critical genes for vascular development stages, i.e. formation of provascular cells, xylem specification and differentiation, and phloem specification and differentiation, was compared in S. moellendorffii tissues, indicating a less complex regulatory mechanism in lycophytes than in flowering plants. The results were further strengthened by the evolutionary trend of

  16. Methylobacteria isolated from bryophytes and the 2-fold description of the same microbial species.

    Science.gov (United States)

    Schauer, S; Kutschera, U

    2013-02-01

    On the surface of healthy land plants (embryophytes), numerous non-pathogenic bacteria have been discovered and described. Among these epiphytic microbes, pink-pigmented facultative methylotrophic microbes of the genus Methylobacterium are of special significance, because these microorganisms consume methanol emitted via the stomatal pores and secrete growth-promoting phytohormones. Methylobacterium funariae, Schauer and Kutschera 2011, a species isolated in our lab from the common cord moss, described as a nova species in this journal, was recently characterized for a second time as a "new taxon" under a different name, "M. bullatum." Based on a phylogenetic analysis, we show that these taxa are identical. In addition, we provide novel information on the exact cell size, and describe the correct type locality of this bacterial species, which was classified as a phytosymbiont. Finally, we discuss the hypothesis that certain methylobacteria may preferentially colonize bryophytes. With reference to our recent discovery that thalli of ferns form, like liverworts and moss protonemata, associations with methylobacteria, we argue that the haploid phase of cryptogames are preferred host organisms of these pink-pigmented microbial phytosymbionts.

  17. Bryophyte species richness on retention aspens recovers in time but community structure does not.

    Science.gov (United States)

    Oldén, Anna; Ovaskainen, Otso; Kotiaho, Janne S; Laaka-Lindberg, Sanna; Halme, Panu

    2014-01-01

    Green-tree retention is a forest management method in which some living trees are left on a logged area. The aim is to offer 'lifeboats' to support species immediately after logging and to provide microhabitats during and after forest re-establishment. Several studies have shown immediate decline in bryophyte diversity after retention logging and thus questioned the effectiveness of this method, but longer term studies are lacking. Here we studied the epiphytic bryophytes on European aspen (Populus tremula L.) retention trees along a 30-year chronosequence. We compared the bryophyte flora of 102 'retention aspens' on 14 differently aged retention sites with 102 'conservation aspens' on 14 differently aged conservation sites. We used a Bayesian community-level modelling approach to estimate the changes in bryophyte species richness, abundance (area covered) and community structure during 30 years after logging. Using the fitted model, we estimated that two years after logging both species richness and abundance of bryophytes declined, but during the following 20-30 years both recovered to the level of conservation aspens. However, logging-induced changes in bryophyte community structure did not fully recover over the same time period. Liverwort species showed some or low potential to benefit from lifeboating and high potential to re-colonise as time since logging increases. Most moss species responded similarly, but two cushion-forming mosses benefited from the logging disturbance while several weft- or mat-forming mosses declined and did not re-colonise in 20-30 years. We conclude that retention trees do not function as equally effective lifeboats for all bryophyte species but are successful in providing suitable habitats for many species in the long-term. To be most effective, retention cuts should be located adjacent to conservation sites, which may function as sources of re-colonisation and support the populations of species that require old-growth forests.

  18. Bryophyte species richness on retention aspens recovers in time but community structure does not.

    Directory of Open Access Journals (Sweden)

    Anna Oldén

    Full Text Available Green-tree retention is a forest management method in which some living trees are left on a logged area. The aim is to offer 'lifeboats' to support species immediately after logging and to provide microhabitats during and after forest re-establishment. Several studies have shown immediate decline in bryophyte diversity after retention logging and thus questioned the effectiveness of this method, but longer term studies are lacking. Here we studied the epiphytic bryophytes on European aspen (Populus tremula L. retention trees along a 30-year chronosequence. We compared the bryophyte flora of 102 'retention aspens' on 14 differently aged retention sites with 102 'conservation aspens' on 14 differently aged conservation sites. We used a Bayesian community-level modelling approach to estimate the changes in bryophyte species richness, abundance (area covered and community structure during 30 years after logging. Using the fitted model, we estimated that two years after logging both species richness and abundance of bryophytes declined, but during the following 20-30 years both recovered to the level of conservation aspens. However, logging-induced changes in bryophyte community structure did not fully recover over the same time period. Liverwort species showed some or low potential to benefit from lifeboating and high potential to re-colonise as time since logging increases. Most moss species responded similarly, but two cushion-forming mosses benefited from the logging disturbance while several weft- or mat-forming mosses declined and did not re-colonise in 20-30 years. We conclude that retention trees do not function as equally effective lifeboats for all bryophyte species but are successful in providing suitable habitats for many species in the long-term. To be most effective, retention cuts should be located adjacent to conservation sites, which may function as sources of re-colonisation and support the populations of species that require old

  19. Quantifying progress toward a conservation assessment for all plants.

    Science.gov (United States)

    Bachman, Steven P; Nic Lughadha, Eimear M; Rivers, Malin C

    2018-06-01

    The Global Strategy for Plant Conservation (GSPC) set an ambitious target to achieve a conservation assessment for all known plant species by 2020. We consolidated digitally available plant conservation assessments and reconciled their scientific names and assessment status to predefined standards to provide a quantitative measure of progress toward this target. The 241,919 plant conservation assessments generated represent 111,824 accepted land plant species (vascular plants and bryophytes, not algae). At least 73,081 and up to 90,321 species have been assessed at the global scale, representing 21-26% of known plant species. Of these plant species, at least 27,148 and up to 32,542 are threatened. Eighty plant families, including some of the largest, such as Asteraceae, Orchidaceae, and Rubiaceae, are underassessed and should be the focus of assessment effort if the GSPC target is to be met by 2020. Our data set is accessible online (ThreatSearch) and is a baseline that can be used to directly support other GSPC targets and plant conservation action. Although around one-quarter of a million plant assessments have been compiled, the majority of plants are still unassessed. The challenge now is to build on this progress and redouble efforts to document conservation status of unassessed plants to better inform conservation decisions and conserve the most threatened species. © 2017 The Authors. Conservation Biology published by Wiley Periodicals, Inc. on behalf of Society for Conservation Biology.

  20. Diversity, expression and mRNA targeting abilities of Argonaute-targeting miRNAs among selected vascular plants.

    Science.gov (United States)

    Jagtap, Soham; Shivaprasad, Padubidri V

    2014-12-02

    Micro (mi)RNAs are important regulators of plant development. Across plant lineages, Dicer-like 1 (DCL1) proteins process long ds-like structures to produce micro (mi) RNA duplexes in a stepwise manner. These miRNAs are incorporated into Argonaute (AGO) proteins and influence expression of RNAs that have sequence complementarity with miRNAs. Expression levels of AGOs are greatly regulated by plants in order to minimize unwarranted perturbations using miRNAs to target mRNAs coding for AGOs. AGOs may also have high promoter specificity-sometimes expression of AGO can be limited to just a few cells in a plant. Viral pathogens utilize various means to counter antiviral roles of AGOs including hijacking the host encoded miRNAs to target AGOs. Two host encoded miRNAs namely miR168 and miR403 that target AGOs have been described in the model plant Arabidopsis and such a mechanism is thought to be well conserved across plants because AGO sequences are well conserved. We show that the interaction between AGO mRNAs and miRNAs is species-specific due to the diversity in sequences of two miRNAs that target AGOs, sequence diversity among corresponding target regions in AGO mRNAs and variable expression levels of these miRNAs among vascular plants. We used miRNA sequences from 68 plant species representing 31 plant families for this analysis. Sequences of miR168 and miR403 are not conserved among plant lineages, but surprisingly they differ drastically in their sequence diversity and expression levels even among closely related plants. Variation in miR168 expression among plants correlates well with secondary structures/length of loop sequences of their precursors. Our data indicates a complex AGO targeting interaction among plant lineages due to miRNA sequence diversity and sequences of miRNA targeting regions among AGO mRNAs, thus leading to the assumption that the perturbations by viruses that use host miRNAs to target antiviral AGOs can only be species-specific. We also show

  1. Alien invasive vascular plants in South African natural and semi-natural environments : bibliography from 1830

    CSIR Research Space (South Africa)

    Moran, VC

    1982-12-01

    Full Text Available A compilation of references to research on alien invasive plants in South Africa is given. Crop weeds and indigenous plants are not included. Reference is made to 457 publications. Keyword listings and a keyword index are provided....

  2. Role of endophytic fungi in the migration of the radionuclides in the vascular plants of the Ukrainian Polesye sphagniopratum

    International Nuclear Information System (INIS)

    Zhdanova, N.N.; Sokolova, E.V.; Kurchenko, I.N.; Orlov, A.A.

    2002-01-01

    It is known that the specific activity of 137 Cs in vegetative phytomass of cranberry and sphagnum in oligotrophic conditions of Ukrainian Polessye forest sphagniopratum amounts 5000 - 10000 Bq/kg of air-dry weight. Roots of cranberry in natural conditions never run up to peat and mainly are located in top layer of the sphagnum top which is sodden by a water, but specific activity of the radionuclide in swamp water is low (2 - 10 Bq/l). It was supposed that mycorrhizal and endophytic micromycetes take an essential part in transferring the mineral substances and 137 Cs from sphagnum mosses to ericoid plants under oligotrophic swamp conditions. Endophytic fungi from vascular plants were not investigated in Ukraine. The article is devoted to the estimation of distribution of endophytic fungi in plants which are dominants of the plant cover of sphagniopratum. 47 species of micromycetes which belong to 27 genera were identified. For moss and ericoid plants five mutual species of endophytic fungi was detected

  3. The concepts on which a morphology of the vascular plants should be based

    NARCIS (Netherlands)

    Bremekamp, C.E.B.

    1956-01-01

    It can hardly be denied that the expression “General Plant Morphology”, which is so often met with in botanical textbooks, has little or no meaning. A general morphology of the Plant Kingdom would have to occupy itself with those morphological features that are common to all groups of plants, which

  4. Mosses Are Better than Leaves of Vascular Plants in Monitoring Atmospheric Heavy Metal Pollution in Urban Areas.

    Science.gov (United States)

    Jiang, Yanbin; Fan, Miao; Hu, Ronggui; Zhao, Jinsong; Wu, Yupeng

    2018-05-29

    Mosses and leaves of vascular plants have been used as bioindicators of environmental contamination by heavy metals originating from various sources. This study aims to compare the metal accumulation capabilities of mosses and vascular species in urban areas and quantify the suitability of different taxa for monitoring airborne heavy metals. One pleurocarpous feather moss species, Haplocladium angustifolium , and two evergreen tree species, Cinnamomum bodinieri Osmanthus fragrans , and substrate soil were sampled in the urban area of different land use types in Wuhan City in China. The concentrations of Ag, As, Cd, Co, Cr, Cu, Mn, Mo, Ni, V, Pb, and Zn in these samples were analyzed by inductively coupled plasma mass spectrometry. The differences of heavy metals concentration in the three species showed that the moss species was considerably more capable of accumulating heavy metals than tree leaves (3 times to 51 times). The accumulated concentration of heavy metals in the moss species depended on the metal species and land use type. The enrichment factors of metals for plants and the correlations of metals in plants with corresponding metals in soil reflected that the accumulated metals in plants stemmed mostly from atmospheric deposition, rather than the substrate soil. Anthropogenic factors, such as traffic emissions from automobile transportation and manufacturing industries, were primarily responsible for the variations in metal pollutants in the atmosphere and subsequently influenced the metal accumulation in the mosses. This study elucidated that the moss species H. angustifolium is relatively more suitable than tree leaves of C. bodinieri and O. fragrans in monitoring heavy metal pollution in urban areas, and currently Wuhan is at a lower contamination level of atmospheric heavy metals than some other cities in China.

  5. Reproductive organ and vascular specific promoter of the rice plasma membrane Ca2+ATPase mediates environmental stress responses in plants.

    Science.gov (United States)

    Huda, Kazi Md Kamrul; Banu, Mst Sufara Akhter; Pathi, Krishna Mohan; Tuteja, Narendra

    2013-01-01

    Plasma membrane Ca(2+)ATPase is a transport protein in the plasma membrane of cells and helps in removal of calcium (Ca(2+)) from the cell, hence regulating Ca(2+) level within cells. Though plant Ca(2+)ATPases have been shown to be involved in plant stress responses but their promoter regions have not been well studied. The 1478 bp promoter sequence of rice plasma membrane Ca(2+)ATPase contains cis-acting elements responsive to stresses and plant hormones. To identify the functional region, serial deletions of the promoter were fused with the GUS sequence and four constructs were obtained. These were differentially activated under NaCl, PEG cold, methyl viologen, abscisic acid and methyl jasmonate treatments. We demonstrated that the rice plasma membrane Ca(2+)ATPase promoter is responsible for vascular-specific and multiple stress-inducible gene expression. Only full-length promoter showed specific GUS expression under stress conditions in floral parts. High GUS activity was observed in roots with all the promoter constructs. The -1478 to -886 bp flanking region responded well upon treatment with salt and drought. Only the full-length promoter presented cold-induced GUS expression in leaves, while in shoots slight expression was observed for -1210 and -886 bp flanking region. The -1210 bp deletion significantly responded to exogenous methyl viologen and abscisic acid induction. The -1210 and -886 bp flanking region resulted in increased GUS activity in leaves under methyl jasmonate treatments, whereas in shoots the -886 bp and -519 bp deletion gave higher expression. Salicylic acid failed to induce GUS activities in leaves for all the constructs. The rice plasma membrane Ca(2+)ATPase promoter is a reproductive organ-specific as well as vascular-specific. This promoter contains drought, salt, cold, methyl viologen, abscisic acid and methyl jasmonate related cis-elements, which regulated gene expression. Overall, the tissue-specificity and inducible nature of this

  6. 14CO2 labeling. A reliable technique for rapid measurement of total root exudation capacity and vascular sap flow in crop plants

    International Nuclear Information System (INIS)

    Bhupinder Singh; Sumedha Ahuja; Renu Pandey; Singhal, R.K.

    2014-01-01

    Root release of organic compounds and rate of the vascular sap flow are important for understanding the nutrient and the source-sink dynamics in plants, however, their determination is procedurally cumbersome and time consuming. We report here a simple method involving 14 C labeling for rapid and reliable measurement of root exudates and vascular sap flow rate in a variable groundnut population developed through seed gamma irradiation using a cobalt source ( 60 Co). An experimental hypothesis that a higher 14 C level in the vascular sap would indicate a higher root release of carbon by the roots into the rhizosphere was verified. (author)

  7. High specificity but contrasting biodiversity of Sphagnum-associated bacterial and plant communities in bog ecosystems independent of the geographical region.

    Science.gov (United States)

    Opelt, Katja; Berg, Christian; Schönmann, Susan; Eberl, Leo; Berg, Gabriele

    2007-10-01

    Mosses represent ecological niches that harbor a hitherto largely uncharacterized microbial diversity. To investigate which factors affect the biodiversity of bryophyte-associated bacteria, we analyzed the bacterial communities associated with two moss species, which exhibit different ecological behaviors and importance in bog ecosystems, Sphagnum magellanicum and Sphagnum fallax, from six temperate and boreal bogs in Germany and Norway. Furthermore, their surrounding plant communities were studied. Molecular analysis of bacterial communities was determined by single-strand conformation polymorphism (SSCP) analysis using eubacterial and genus-specific primers for the dominant genera Burkholderia and Serratia as well as by sequence analysis of a Burkholderia 16S rRNA gene clone library. Plant communities were analyzed by monitoring the abundance and composition of bryophyte and vascular plant species, and by determining ecological indicator values. Interestingly, we found a high degree of host specificity for associated bacterial and plant communities of both Sphagnum species independent of the geographical region. Calculation of diversity indices on the basis of SSCP gels showed that the S. fallax-associated communities displayed a statistically significant higher degree of diversity than those associated with S. magellanicum. In contrast, analyses of plant communities of Sphagnum-specific habitats resulted in a higher diversity of S. magellanicum-specific habitats for all six sites. The higher content of nutrients in the S. fallax-associated ecosystems can explain higher diversity of microorganisms.

  8. Vascular plant biodiversity of the lower Coppermine River valley and vicinity (Nunavut, Canada: an annotated checklist of an Arctic flora

    Directory of Open Access Journals (Sweden)

    Jeffery M. Saarela

    2017-01-01

    Full Text Available The Coppermine River in western Nunavut is one of Canada’s great Arctic rivers, yet its vascular plant flora is poorly known. Here, we report the results of a floristic inventory of the lower Coppermine River valley and vicinity, including Kugluk (Bloody Falls Territorial Park and the hamlet of Kugluktuk. The study area is approximately 1,200 km2, extending from the forest-tundra south of the treeline to the Arctic coast. Vascular plant floristic data are based on a review of all previous collections from the area and more than 1,200 new collections made in 2014. Results are presented in an annotated checklist, including citation of all specimens examined, comments on taxonomy and distribution, and photographs for a subset of taxa. The vascular plant flora comprises 300 species (311 taxa, a 36.6% increase from the 190 species documented by previous collections made in the area over the last century, and is considerably more diverse than other local floras on mainland Nunavut. We document 207 taxa for Kugluk (Bloody Falls Territorial Park, an important protected area for plants on mainland Nunavut. A total of 190 taxa are newly recorded for the study area. Of these, 14 taxa (13 species and one additional variety are newly recorded for Nunavut (Allium schoenoprasum, Carex capitata, Draba lonchocarpa, Eremogone capillaris subsp. capillaris, Sabulina elegans, Eleocharis quinqueflora, Epilobium cf. anagallidifolium, Botrychium neolunaria, Botrychium tunux, Festuca altaica, Polygonum aviculare, Salix ovalifolia var. arctolitoralis, Salix ovalifolia var. ovalifolia and Stuckenia pectinata, seven species are newly recorded for mainland Nunavut (Carex gynocrates, Carex livida, Cryptogramma stelleri, Draba simmonsii, Festuca viviparoidea subsp. viviparoidea, Juncus alpinoarticulatus subsp. americanus and Salix pseudomyrsinites and 56 range extensions are reported. The psbA-trnH and rbcL DNA sequence data were used to help identify the three Botrychium

  9. Desiccation tolerance in bryophytes: The dehydration and rehydration transcriptomes in the desiccation-tolerant bryophyte Bryum argenteum.

    Science.gov (United States)

    Gao, Bei; Li, Xiaoshuang; Zhang, Daoyuan; Liang, Yuqing; Yang, Honglan; Chen, Moxian; Zhang, Yuanming; Zhang, Jianhua; Wood, Andrew J

    2017-08-08

    The desiccation tolerant bryophyte Bryum argenteum is an important component of desert biological soil crusts (BSCs) and is emerging as a model system for studying vegetative desiccation tolerance. Here we present and analyze the hydration-dehydration-rehydration transcriptomes in B. argenteum to establish a desiccation-tolerance transcriptomic atlas. B. argenteum gametophores representing five different hydration stages (hydrated (H0), dehydrated for 2 h (D2), 24 h (D24), then rehydrated for 2 h (R2) and 48 h (R48)), were sampled for transcriptome analyses. Illumina high throughput RNA-Seq technology was employed and generated more than 488.46 million reads. An in-house de novo transcriptome assembly optimization pipeline based on Trinity assembler was developed to obtain a reference Hydration-Dehydration-Rehydration (H-D-R) transcriptome comprising of 76,206 transcripts, with an N50 of 2,016 bp and average length of 1,222 bp. Comprehensive transcription factor (TF) annotation discovered 978 TFs in 62 families, among which 404 TFs within 40 families were differentially expressed upon dehydration-rehydration. Pfam term enrichment analysis revealed 172 protein families/domains were significantly associated with the H-D-R cycle and confirmed early rehydration (i.e. the R2 stage) as exhibiting the maximum stress-induced changes in gene expression.

  10. The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants

    KAUST Repository

    Hoehndorf, Robert

    2016-11-14

    Background The systematic analysis of a large number of comparable plant trait data can support investigations into phylogenetics and ecological adaptation, with broad applications in evolutionary biology, agriculture, conservation, and the functioning of ecosystems. Floras, i.e., books collecting the information on all known plant species found within a region, are a potentially rich source of such plant trait data. Floras describe plant traits with a focus on morphology and other traits relevant for species identification in addition to other characteristics of plant species, such as ecological affinities, distribution, economic value, health applications, traditional uses, and so on. However, a key limitation in systematically analyzing information in Floras is the lack of a standardized vocabulary for the described traits as well as the difficulties in extracting structured information from free text. Results We have developed the Flora Phenotype Ontology (FLOPO), an ontology for describing traits of plant species found in Floras. We used the Plant Ontology (PO) and the Phenotype And Trait Ontology (PATO) to extract entity-quality relationships from digitized taxon descriptions in Floras, and used a formal ontological approach based on phenotype description patterns and automated reasoning to generate the FLOPO. The resulting ontology consists of 25,407 classes and is based on the PO and PATO. The classified ontology closely follows the structure of Plant Ontology in that the primary axis of classification is the observed plant anatomical structure, and more specific traits are then classified based on parthood and subclass relations between anatomical structures as well as subclass relations between phenotypic qualities. Conclusions The FLOPO is primarily intended as a framework based on which plant traits can be integrated computationally across all species and higher taxa of flowering plants. Importantly, it is not intended to replace established

  11. The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants.

    Science.gov (United States)

    Hoehndorf, Robert; Alshahrani, Mona; Gkoutos, Georgios V; Gosline, George; Groom, Quentin; Hamann, Thomas; Kattge, Jens; de Oliveira, Sylvia Mota; Schmidt, Marco; Sierra, Soraya; Smets, Erik; Vos, Rutger A; Weiland, Claus

    2016-11-14

    The systematic analysis of a large number of comparable plant trait data can support investigations into phylogenetics and ecological adaptation, with broad applications in evolutionary biology, agriculture, conservation, and the functioning of ecosystems. Floras, i.e., books collecting the information on all known plant species found within a region, are a potentially rich source of such plant trait data. Floras describe plant traits with a focus on morphology and other traits relevant for species identification in addition to other characteristics of plant species, such as ecological affinities, distribution, economic value, health applications, traditional uses, and so on. However, a key limitation in systematically analyzing information in Floras is the lack of a standardized vocabulary for the described traits as well as the difficulties in extracting structured information from free text. We have developed the Flora Phenotype Ontology (FLOPO), an ontology for describing traits of plant species found in Floras. We used the Plant Ontology (PO) and the Phenotype And Trait Ontology (PATO) to extract entity-quality relationships from digitized taxon descriptions in Floras, and used a formal ontological approach based on phenotype description patterns and automated reasoning to generate the FLOPO. The resulting ontology consists of 25,407 classes and is based on the PO and PATO. The classified ontology closely follows the structure of Plant Ontology in that the primary axis of classification is the observed plant anatomical structure, and more specific traits are then classified based on parthood and subclass relations between anatomical structures as well as subclass relations between phenotypic qualities. The FLOPO is primarily intended as a framework based on which plant traits can be integrated computationally across all species and higher taxa of flowering plants. Importantly, it is not intended to replace established vocabularies or ontologies, but rather

  12. Vegetation dynamics at the upper elevational limit of vascular plants in Himalaya.

    Science.gov (United States)

    Dolezal, Jiri; Dvorsky, Miroslav; Kopecky, Martin; Liancourt, Pierre; Hiiesalu, Inga; Macek, Martin; Altman, Jan; Chlumska, Zuzana; Rehakova, Klara; Capkova, Katerina; Borovec, Jakub; Mudrak, Ondrej; Wild, Jan; Schweingruber, Fritz

    2016-05-04

    A rapid warming in Himalayas is predicted to increase plant upper distributional limits, vegetation cover and abundance of species adapted to warmer climate. We explored these predictions in NW Himalayas, by revisiting uppermost plant populations after ten years (2003-2013), detailed monitoring of vegetation changes in permanent plots (2009-2012), and age analysis of plants growing from 5500 to 6150 m. Plant traits and microclimate variables were recorded to explain observed vegetation changes. The elevation limits of several species shifted up to 6150 m, about 150 vertical meters above the limit of continuous plant distribution. The plant age analysis corroborated the hypothesis of warming-driven uphill migration. However, the impact of warming interacts with increasing precipitation and physical disturbance. The extreme summer snowfall event in 2010 is likely responsible for substantial decrease in plant cover in both alpine and subnival vegetation and compositional shift towards species preferring wetter habitats. Simultaneous increase in summer temperature and precipitation caused rapid snow melt and, coupled with frequent night frosts, generated multiple freeze-thaw cycles detrimental to subnival plants. Our results suggest that plant species responses to ongoing climate change will not be unidirectional upward range shifts but rather multi-dimensional, species-specific and spatially variable.

  13. The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants

    KAUST Repository

    Hoehndorf, Robert; AlShahrani, Mona; Gkoutos, Georgios V.; Gosline, George; Groom, Quentin; Hamann, Thomas; Kattge, Jens; de Oliveira, Sylvia Mota; Schmidt, Marco; Sierra, Soraya; Smets, Erik; Vos, Rutger A.; Weiland, Claus

    2016-01-01

    The systematic analysis of a large number of comparable plant trait data can support investigations into phylogenetics and ecological adaptation, with broad applications in evolutionary biology, agriculture, conservation

  14. Northern peatland carbon biogeochemistry. The influence of vascular plants and edaphic factors on carbon dioxide and methane exchange

    International Nuclear Information System (INIS)

    Oequist, M.

    2001-01-01

    The findings reported in this thesis and in the accompanying papers are based on both laboratory and field investigations of carbon transformation dynamics on the process scale and at the resolution of individual peatland plant communities. The data from one of the studies also is extrapolated in an attempt to identify environmental controls on regional scales in order to predict the response of northern peatlands to climate warming. The laboratory experiments focus on how climate variations, inducing fluctuations in groundwater level and also soil freeze-thaw cycles, influences organic matter mineralisation to carbon dioxide and methane. The field studies investigate year-to-year variations and interdecadal differences in carbon gas exchange at a subarctic peatland, and also how the physiological activities of vascular plants control methane emission rates. The main conclusions presented include: Soil freeze-thaw events may be very important for the annual carbon balance in northern peatlands, because they have the potential to increase mineralisation rates and alter biogeochemical degradation pathways. Vascular plants exert a strong influence on methane flux dynamics during the growing season, both by mediating methane transport and through substrate-based interactions with the soil microbial community. However, there are important species-related factors that govern the nature and extent of this influence. Caution has to be taken when extrapolating field data to estimate regional carbon exchange because the relevance of the specific environmental parameters that control this exchange varies depending on resolution. On broad spatial and temporal scales the best predictor of peatland methane emissions is mean soil temperature, but also microbial substrate availability (expressed as the organic acid concentration in peat water) is of importance. This temperature sensitivity represents a strong potential feedback mechanism on climate change

  15. Metabolic patterns of 14C incorporation by selected vascular plants following field incubations with acetate-2-14C in two plant successional stages in Glacier Bay, Alaska

    International Nuclear Information System (INIS)

    Wu, Pei-Hsing Lin

    1975-01-01

    Metabolic patterns of some vascular plants (Dryas sp., Vaccinium sp., Salix sp., Alnus sp., Epilobium sp.), occurring in successional habitats, following acetate-2- 14 C incubations in the field were demonstrated for the first time. Relative radioactivity within the alcoholic soluble fraction of each species reflects its distribution in successional communities. A high level of 14 C-sugars was present in the plants of the pioneer community; on the other hand a high level of 14 C-organic acids was present in the plants of the forest community. Three patterns, based on the relative activities of the sugar- and organic acid-pools were noted which correspond to the range and the frequency of occurrence of each species in the successional stages. Only two types of 14 C-amino acid levels were noted corresponding to the range of distribution. Plants having less than 10% relative radioactivity in amino acid-pools had a limited range of distribution and reside in only one habitat; plants having more than 10% radioactivity showed wider ranges of distribution occurring in at least two habitats. (auth.)

  16. Disentangling the influence of environmental and anthropogenic factors on the distribution of endemic vascular plants in Sardinia.

    Science.gov (United States)

    Fois, Mauro; Fenu, Giuseppe; Cañadas, Eva Maria; Bacchetta, Gianluigi

    2017-01-01

    Due to the impelling urgency of plant conservation and the increasing availability of high resolution spatially interpolated (e.g. climate variables) and categorical data (e.g. land cover and vegetation type), many recent studies have examined relationships among plant species distributions and a diversified set of explanatory factors; nevertheless, global and regional patterns of endemic plant richness remain in many cases unexplained. One such pattern is the 294 endemic vascular plant taxa recorded on a 1 km resolution grid on the environmentally heterogeneous island of Sardinia. Sixteen predictors, including topographic, geological, climatic and anthropogenic factors, were used to model local (number of taxa inside each 1 km grid cell) Endemic Vascular Plant Richness (EVPR). Generalized Linear Models were used to evaluate how each factor affected the distribution of local EVPR. Significant relationships with local EVPR and topographic, geological, climatic and anthropogenic factors were found. In particular, elevation explained the larger fraction of variation in endemic richness but other environmental factors (e.g. precipitation seasonality and slope) and human-related factors (e.g. the Human Influence Index (HII) and the proportion of anthropogenic land uses) were, respectively, positively and negatively correlated with local EVPR. Regional EVPR (number of endemic taxa inside each 100 m elevation interval) was also measured to compare local and regional EVPR patterns along the elevation gradient. In contrast to local, regional EVPR tended to decrease with altitude partly due to the decreasing area covered along altitude. The contrasting results between local and regional patterns suggest that local richness increases as a result of increased interspecific aggregation along altitude, whereas regional richness may depend on the interaction between area and altitude. This suggests that the shape and magnitude of the species-area relationship might vary with

  17. The Integration of Electrical Signals Originating in the Root of Vascular Plants

    Directory of Open Access Journals (Sweden)

    Javier Canales

    2018-01-01

    Full Text Available Plants have developed different signaling systems allowing for the integration of environmental cues to coordinate molecular processes associated to both early development and the physiology of the adult plant. Research on systemic signaling in plants has traditionally focused on the role of phytohormones as long-distance signaling molecules, and more recently the importance of peptides and miRNAs in building up this communication process has also been described. However, it is well-known that plants have the ability to generate different types of long-range electrical signals in response to different stimuli such as light, temperature variations, wounding, salt stress, or gravitropic stimulation. Presently, it is unclear whether short or long-distance electrical communication in plants is linked to nutrient uptake. This review deals with aspects of sensory input in plant roots and the propagation of discrete signals to the plant body. We discuss the physiological role of electrical signaling in nutrient uptake and how nutrient variations may become an electrical signal propagating along the plant.

  18. Measurement and modeling of bryophyte evaporation in a boreal forest chronosequence

    Energy Technology Data Exchange (ETDEWEB)

    Bond-Lamberty, Benjamin; Gower, Stith T.; Amiro, Brian; Ewers, Brent

    2011-01-19

    The effects of changing climate and disturbance on forest water cycling are not well understood. In particular bryophytes contribute significantly to forest evapotranspiration (ET) in poorly-drained boreal forests, but few studies have directly measured this flux and how it changes with stand age and soil drainage. We used large chambers to measure bryophyte evaporation (E) in Canadian Picea mariana forests of varying ages and soil drainages, as well under controlled laboratory conditions, and modeled daily E using site-specific meteorological data to drive a Penman-Monteith-based model. Field measurements of E averaged 0.37 mm day-1, and ranged from 0.03 (Pleurozium schreberii in a 77-year-old dry stand) to 1.43 mm day-1 (Sphagnum riparium in a 43-year-old bog). canopy resistance ranged from ~0 (at 25 °C, some values were <0) to ~1500 s m-1 for dry, cold (5 °C) mosses. In the laboratory, moss canopy resistance was constant until a moss water content of ~6 g g-1 and then climbed sharply with further drying; no difference was observed between the three moss groups (feather mosses, hollow mosses, and hummock mosses) tested. Modeled annual E fluxes from bryophytes ranged from 0.4 mm day-1, in the well-drained stands, to ~1 mm day-1 in the 43-year-old bog, during the growing season. Eddy covariance data imply that bryophytes contributed 18-31% and 49-69% to the total ET flux, at the well- and poorly-drained stands respectively. Bryophyte E was greater in bogs than in upland stands, was driven by low-lying mosses, and did not vary with stand age; this suggests that shifts in forest age due to increasing fire will have little effect on the bryophyte contribution to ET.

  19. Ceratopteris richardii (C-fern: A model for investigating adaptive modification of vascular plant cell walls

    Directory of Open Access Journals (Sweden)

    Olivier eLeroux

    2013-09-01

    Full Text Available Plant cell walls are essential for most aspects of plant growth, development, and survival, including cell division, expansive cell growth, cell-cell communication, biomechanical properties, and stress responses. Therefore, characterising cell wall diversity contributes to our overall understanding of plant evolution and development. Recent biochemical analyses, concomitantly with whole genome sequencing of plants located at pivotal points in plant phylogeny, have helped distinguish between homologous characters and those which might be more derived. Most plant lineages now have at least one fully sequenced representative and although genome sequences for fern species are in progress they not yet available this group. Ferns offer key advantages for the study of developmental processes leading to vascularisation and complex organs as well as the specific differences between diploid sporophyte tissues and haploid gametophyte tissues and the interplay between them. Ceratopteris richardii has been well investigated building a body of knowledge which combined with the genomic and biochemical information available for other plants will progress our understanding of wall diversity and its impact on evolution and development.

  20. Methane transport and emissions from soil as affected by water table and vascular plants.

    Science.gov (United States)

    Bhullar, Gurbir S; Iravani, Majid; Edwards, Peter J; Olde Venterink, Harry

    2013-09-08

    The important greenhouse gas (GHG) methane is produced naturally in anaerobic wetland soils. By affecting the production, oxidation and transport of methane to the atmosphere, plants have a major influence upon the quantities emitted by wetlands. Different species and functional plant groups have been shown to affect these processes differently, but our knowledge about how these effects are influenced by abiotic factors such as water regime and temperature remains limited. Here we present a mesocosm experiment comparing eight plant species for their effects on internal transport and overall emissions of methane under contrasting hydrological conditions. To quantify how much methane was transported internally through plants (the chimney effect), we blocked diffusion from the soil surface with an agar seal. We found that graminoids caused higher methane emissions than forbs, although the emissions from mesocosms with different species were either lower than or comparable to those from control mesocosms with no plant (i.e. bare soil). Species with a relatively greater root volume and a larger biomass exhibited a larger chimney effect, though overall methane emissions were negatively related to plant biomass. Emissions were also reduced by lowering the water table. We conclude that plant species (and functional groups) vary in the degree to which they transport methane to the atmosphere. However, a plant with a high capacity to transport methane does not necessarily emit more methane, as it may also cause more rhizosphere oxidation of methane. A shift in plant species composition from graminoids to forbs and/or from low to high productive species may lead to reduction of methane emissions.

  1. Effects of air pollution on bryophytes in the area of Hunedoara

    Energy Technology Data Exchange (ETDEWEB)

    Peicea, I M

    1973-01-01

    The effects of atmospheric pollution with SO/sub 2/, on bryophyte populations, in the area of the Industrial Complex Hunedoara were investigated. By the comparative analyses of some bryo-ecological indicators for the vegetation of polluted and unpolluted areas, evidence is presented of the increasing effects of a polluted environment in the vicinity of the pollution source. A classification is included of the territory in five areas, according to the degree of pollution. A classification of bryophytes is presented according to the degree of their sensitivity: very resistant, toxitolerant, moderately sensitive, and sensitive species.

  2. Studies on distribution pattern of {sup 14}C-assimilates in relation to vascular pattern derived from phyllotaxis of tomato plants

    Energy Technology Data Exchange (ETDEWEB)

    Shishido, Y. [National Research Inst. of Vegetables, Ornamental Plants and Tea, Ano, Mie (Japan); Seyama, N.; Hori, Y.

    1988-12-15

    The association of distribution of photosynthetic assimilates in tomato with phyllotaxis and arrangement of the vascular system was studied. To ascertain the phyllotaxis of tomato plants, which was alternate with four orthostichies with devergence of 90° (270°) and 180°, the vascular system was revealed by methylene blue (0.5%), eothine (1.0%) and fuchsin (1.0%) from leaf petioles and the distribution of photosynthetic assmilates was measured by {sup 14}C. The vascular system of tomato basically consisted of four orthostichies with two vascular bundles from each leaf. The arrangement of the vascular systems evidently affected the movement of {sup 14}C-assimilates to sinks. Such movement from each leaf was affected by the degree of connection of the vascular bundles. Since tomato has a sympodial branching system, the leaf which is apparently situated just above the inflorescence differentiated before the inflorescence. The vascular bundles of the leaf of the sympodial branch around the inflorescence developed between the inflorescence and the leaf just above it. This results in a comparatively small proportion of distribution to the inflorescence from the leaf just above it.

  3. Regulation of plant vascular stem cells by endodermis-derived EPFL-family peptide hormones and phloem-expressed ERECTA-family receptor kinases.

    Science.gov (United States)

    Uchida, Naoyuki; Tasaka, Masao

    2013-12-01

    Plant vasculatures are complex tissues consisting of (pro)cambium, phloem, and xylem. The (pro)cambium serves as vascular stem cells that produce all vascular cells. The Arabidopsis ERECTA (ER) receptor kinase is known to regulate the architecture of inflorescence stems. It was recently reported that the er mutation enhances a vascular phenotype induced by a mutation of TDR/PXY, which plays a significant role in procambial proliferation, suggesting that ER participates in vascular development. However, detailed molecular mechanisms of the ER-dependent vascular regulation are largely unknown. Here, this work found that ER and its paralogue, ER-LIKE1, were redundantly involved in procambial development of inflorescence stems. Interestingly, their activity in the phloem was sufficient for vascular regulation. Furthermore, two endodermis-derived peptide hormones, EPFL4 and EPFL6, were redundantly involved in such regulation. It has been previously reported that EPFL4 and EPFL6 act as ligands of phloem-expressed ER for stem elongation. Therefore, these findings indicate that cell-cell communication between the endodermis and the phloem plays an important role in procambial development as well as stem elongation. Interestingly, similar EPFL-ER modules control two distinct developmental events by slightly changing their components: the EPFL4/6-ER module for stem elongation and the EPFL4/6-ER/ERL1 module for vascular development.

  4. Phytochemical profiles and antioxidant potential of four Arctic vascular plants from Svalbard

    Digital Repository Service at National Institute of Oceanography (India)

    Singh, P.; Singh, S.M.; DeSouza, L.; Wahidullah, S.

    the chemical composition and antioxidative activities of four Arctic flowering plant species (Dryas octopetala, Carex rupestris, Silene uralensis and Deschampsia alpina.) through in vitro measurements of the free radical scavenging activities (FRS), inhibition...

  5. RELEVANCE OF ROOTED VASCULAR PLANTS AS INDICATORS OF ESTUARINE SEDIMENT QUALITY

    Science.gov (United States)

    Toxicity assessments and numerical quality assessment guidelines for estuarine sediments are rarely based on information for aquatic plants. The effect of this lack of information on contaminated sediment evaluations is largely unknown. For this reason, the toxicities of whole se...

  6. Vegetation dynamics at the upper elevational limit of vascular plants in Himalaya

    Czech Academy of Sciences Publication Activity Database

    Doležal, Jiří; Dvorský, Miroslav; Kopecký, Martin; Liancourt, Pierre; Hiiesalu, Inga; Macek, Martin; Altman, Jan; Chlumská, Z.; Řeháková, Klára; Čapková, Kateřina; Borovec, Jakub; Mudrák, Ondřej; Wild, Jan; Schweingruber, F. H.

    2016-01-01

    Roč. 6, May (2016), s. 1-13, č. článku 24881. ISSN 2045-2322 R&D Projects: GA ČR GA13-13368S EU Projects: European Commission(XE) 267243 Institutional support: RVO:67985939 ; RVO:60077344 Keywords : climate change * plant age * plant distribution Subject RIV: EH - Ecology, Behaviour Impact factor: 4.259, year: 2016

  7. Methane transport and emissions from soil as affected by water table and vascular plants

    OpenAIRE

    Bhullar, Gurbir S; Iravani, Majid; Edwards, Peter J; Olde Venterink, Harry

    2013-01-01

    Background: The important greenhouse gas (GHG) methane is produced naturally in anaerobic wetland soils. By affecting the production, oxidation and transport of methane to the atmosphere, plants have a major influence upon the quantities emitted by wetlands. Different species and functional plant groups have been shown to affect these processes differently, but our knowledge about how these effects are influenced by abiotic factors such as water regime and temperature remains limited. Here...

  8. The effect of environmental change on vascular plant and cryptogam communities from the Falkland Islands and the Maritime Antarctic

    Directory of Open Access Journals (Sweden)

    Convey Peter

    2007-12-01

    Full Text Available Abstract Background Antarctic terrestrial vegetation is subject to one of the most extreme climates on Earth. Currently, parts of Antarctica are one of the fastest warming regions on the planet. During 3 growing seasons, we investigated the effect of experimental warming on the diversity and abundance of coastal plant communities in the Maritime Antarctic region (cryptogams only and the Falkland Islands (vascular plants only. We compared communities from the Falkland Islands (51°S, mean annual temperature 7.9°C, with those of Signy Island (60°S, -2.1°C and Anchorage Island (67°S, -2.6°C, and experimental temperature manipulations at each of the three islands using Open Top Chambers (OTCs. Results Despite the strong difference in plant growth form dominance between the Falkland Islands and the Maritime Antarctic, communities across the gradient did not differ in total diversity and species number. During the summer months, the experimental temperature increase at 5 cm height in the vegetation was similar between the locations (0.7°C across the study. In general, the response to this experimental warming was low. Total lichen cover showed a non-significant decreasing trend at Signy Island (p Conclusion These results suggest that small temperature increases may rapidly lead to decreased soil moisture, resulting in more stressful conditions for plants. The more open plant communities (grass and lichen appeared more negatively affected by such changes than dense communities (dwarf shrub and moss.

  9. Taxonomic and phylogenetic diversity of vascular plants at Ma'anling volcano urban park in tropical Haikou, China: Reponses to soil properties.

    Science.gov (United States)

    Cheng, Xia-Lan; Yuan, Lang-Xing; Nizamani, Mir Mohammad; Zhu, Zhi-Xin; Friedman, Cynthia Ross; Wang, Hua-Feng

    2018-01-01

    Anthropogenic processes and socio-economic factors play important roles in shaping plant diversity in urban parks. To investigate how plant diversity of Ma' anling urban volcano park in Hainan Province, China respond to these factors, we carried out a field investigation on the taxonomic and phylogenetic diversity of vascular plants and soil properties in this area. We found 284 species of vascular plants belonging to 88 families and 241 genera, which included 194 native species, 23 invasive species, 31 naturalized species, 40 cultivars, and 4 rare / endangered plant species. Tree composition and richness significantly varied between different vegetation formations (plantation, secondary forest, and abandoned land). Plant species richness and community composition were significantly affected by elevation (El), soil water content (WC), total soil nitrogen (TN) and soil organic matter (SOM). There were significant diversity differences between plantations and abandoned lands, but not between the plantations and secondary forests. The flora in the study site was tropical in nature, characterized by pantropic distributions. Compared to adjacent areas, floristic composition in the study site was most similar to that of Guangdong, followed by that of Vietnam. Our study revealed the diversity patterns of volcanic plants and provided the basis for future planning of plant conservation, such as preserving plant species, maintaining plant habitats, and coordinating plant management in this region.

  10. Can oxygen stable isotopes be used to track precipitation moisture source in vascular plant-dominated peatlands?

    Science.gov (United States)

    Amesbury, Matthew J.; Charman, Dan J.; Newnham, Rewi M.; Loader, Neil J.; Goodrich, Jordan; Royles, Jessica; Campbell, David I.; Keller, Elizabeth D.; Baisden, W. Troy; Roland, Thomas P.; Gallego-Sala, Angela V.

    2015-11-01

    Variations in the isotopic composition of precipitation are determined by fractionation processes which occur during temperature- and humidity-dependent phase changes associated with evaporation and condensation. Oxygen stable isotope ratios have therefore been frequently used as a source of palaeoclimate data from a variety of proxy archives, which integrate this signal over time. Applications from ombrotrophic peatlands, where the source water used in cellulose synthesis is derived solely from precipitation, have been mostly limited to Northern Hemisphere Sphagnum-dominated bogs, with few in the Southern Hemisphere or in peatlands dominated by vascular plants. New Zealand (NZ) provides an ideal location to undertake empirical research into oxygen isotope fractionation in vascular peatlands because single taxon analysis can be easily carried out, in particular using the preserved root matrix of the restionaceous wire rush (Empodisma spp.) that forms deep Holocene peat deposits throughout the country. Furthermore, large gradients are observed in the mean isotopic composition of precipitation across NZ, caused primarily by the relative influence of different climate modes. Here, we test whether δ18O of Empodisma α-cellulose from ombrotrophic restiad peatlands in NZ can provide a methodology for developing palaeoclimate records of past precipitation δ18O. Surface plant, water and precipitation samples were taken over spatial (six sites spanning >10° latitude) and temporal (monthly measurements over one year) gradients. A link between the isotopic composition of root-associated water, the most likely source water for plant growth, and precipitation in both datasets was found. Back-trajectory modelling of precipitation moisture source for rain days prior to sampling showed clear seasonality in the temporal data that was reflected in root-associated water. The link between source water and plant cellulose was less clear, although mechanistic modelling predicted mean

  11. Reproductive organ and vascular specific promoter of the rice plasma membrane Ca2+ATPase mediates environmental stress responses in plants.

    Directory of Open Access Journals (Sweden)

    Kazi Md Kamrul Huda

    Full Text Available Plasma membrane Ca(2+ATPase is a transport protein in the plasma membrane of cells and helps in removal of calcium (Ca(2+ from the cell, hence regulating Ca(2+ level within cells. Though plant Ca(2+ATPases have been shown to be involved in plant stress responses but their promoter regions have not been well studied.The 1478 bp promoter sequence of rice plasma membrane Ca(2+ATPase contains cis-acting elements responsive to stresses and plant hormones. To identify the functional region, serial deletions of the promoter were fused with the GUS sequence and four constructs were obtained. These were differentially activated under NaCl, PEG cold, methyl viologen, abscisic acid and methyl jasmonate treatments. We demonstrated that the rice plasma membrane Ca(2+ATPase promoter is responsible for vascular-specific and multiple stress-inducible gene expression. Only full-length promoter showed specific GUS expression under stress conditions in floral parts. High GUS activity was observed in roots with all the promoter constructs. The -1478 to -886 bp flanking region responded well upon treatment with salt and drought. Only the full-length promoter presented cold-induced GUS expression in leaves, while in shoots slight expression was observed for -1210 and -886 bp flanking region. The -1210 bp deletion significantly responded to exogenous methyl viologen and abscisic acid induction. The -1210 and -886 bp flanking region resulted in increased GUS activity in leaves under methyl jasmonate treatments, whereas in shoots the -886 bp and -519 bp deletion gave higher expression. Salicylic acid failed to induce GUS activities in leaves for all the constructs.The rice plasma membrane Ca(2+ATPase promoter is a reproductive organ-specific as well as vascular-specific. This promoter contains drought, salt, cold, methyl viologen, abscisic acid and methyl jasmonate related cis-elements, which regulated gene expression. Overall, the tissue-specificity and inducible

  12. Comparison Of Cd And Zn Accumulation In Tissues Of Different Vascular Plants: A Radiometric Study

    Directory of Open Access Journals (Sweden)

    Dürešová Zuzana

    2015-12-01

    Full Text Available The aim of the present work was to compare the accumulation and translocation of Cd and Zn in plants of tobacco (Nicotiana tabacum L., celery (Apium graveolens L., maize (Zea mays L., giant reed (Arundo donax L., and alpine pennycress (Noccaea caerulescens L. under conditions of short-term hydroponic experiments using nutrient solutions spiked with radionuclides 109Cd or 65Zn, and direct gamma-spectrometry. It was found that the time-course of metals accumulation in studied plants was not different in terms of target metal, but it was significantly different on the level of plant species. The highest values of Cd accumulation showed plants of giant reed, whereby the accumulation decreased in the order: giant reed > tobacco > alpine pennycress >> maize and celery. On the basis of concentration ratios (CR [Me]shoot / [Me]root calculation for both metals, it was found that Cd and Zn were in prevailing part accumulated in the root tissues and only partially accumulated in the shoots, where the amount of accumulated Cd and Zn increased from the oldest developed leaves to the youngest developed leaves. The CR values corresponding to these facts were calculated in the range 0.06 – 0.27 for Cd and for Zn 0.06 – 0.48. In terms of plant species, the CR values obtained for Cd decreased in the order: maize > celery > tobacco and giant reed > alpine pennycress. The similarity between studied objects – individual plant species on the basis of the obtained variables defining Cd or Zn accumulation at different conditions of the experiments as well as the relationships between obtained variables and conditions of the experiments were subjected to multivariate analysis method – cluster analysis (CA. According to the findings and this analysis, it can be expected that plants of tobacco and giant reed will dispose with similar characteristics as plants of alpine pennycress, which are classified as Zn/Cd hyperaccumulators, in terms of Cd or Zn accumulation

  13. Co-ordination of physiological and morphological responses of stomata to elevated [CO2] in vascular plants.

    Science.gov (United States)

    Haworth, Matthew; Elliott-Kingston, Caroline; McElwain, Jennifer C

    2013-01-01

    Plant stomata display a wide range of short-term behavioural and long-term morphological responses to atmospheric carbon dioxide concentration ([CO(2)]). The diversity of responses suggests that plants may have different strategies for controlling gas exchange, yet it is not known whether these strategies are co-ordinated in some way. Here, we test the hypothesis that there is co-ordination of physiological (via aperture change) and morphological (via stomatal density change) control of gas exchange by plants. We examined the response of stomatal conductance (G(s)) to instantaneous changes in external [CO(2)] (C(a)) in an evolutionary cross-section of vascular plants grown in atmospheres of elevated [CO(2)] (1,500 ppm) and sub-ambient [O(2)] (13.0 %) compared to control conditions (380 ppm CO(2), 20.9 % O(2)). We found that active control of stomatal aperture to [CO(2)] above current ambient levels was not restricted to angiosperms, occurring in the gymnosperms Lepidozamia peroffskyana and Nageia nagi. The angiosperm species analysed appeared to possess a greater respiratory demand for stomatal movement than gymnosperm species displaying active stomatal control. Those species with little or no control of stomatal aperture (termed passive) to C(a) were more likely to exhibit a reduction in stomatal density than species with active stomatal control when grown in atmospheres of elevated [CO(2)]. The relationship between the degree of stomatal aperture control to C(a) above ambient and the extent of any reduction in stomatal density may suggest the co-ordination of physiological and morphological responses of stomata to [CO(2)] in the optimisation of water use efficiency. This trade-off between stomatal control strategies may have developed due to selective pressures exerted by the costs associated with passive and active stomatal control.

  14. The distribution and spread of alien vascular plants on Prince Edward Island

    NARCIS (Netherlands)

    Ryan, P.G.; Smith, V.; Gremmen, N.J.M.

    2003-01-01

    Surveys of alien plants at subantarctic Prince Edward Island in 2001 show that the ranges of all three introduced species have increased since the last survey in 1998. Poa annua, the longest-established species, increased its range substantially after 1987, prior to which it was confined to a single

  15. Distribution of vascular plants and macroalgae along salinity and elevation gradients in Oregon tidal marshes

    Science.gov (United States)

    Sea level rise due to global climate change may affect the spatial distribution of plants and macroalgae within tidal estuaries. We present preliminary results from on-going research in Oregon to determine how these potential abiotic drives correlate with the presence or absence...

  16. Vascular plant flora of the alpine zone in the southern Rocky Mountains, U.S.A

    Science.gov (United States)

    James F. Fowler; B. E. Nelson; Ronald L. Hartman

    2014-01-01

    Field detection of changes in occurrence, distribution, or abundance of alpine plant species is predicated on knowledge of which species are in specific locations. The alpine zone of the Southern Rocky Mountain Region has been systematically inventoried by the staff and floristics graduate students from the Rocky Mountain Herbarium over the last 27 years. It is...

  17. An evolutionary perspective on leaf economics : Phylogenetics of leaf mass per area in vascular plants

    NARCIS (Netherlands)

    Flores, Olivier; Garnier, Eric; Wright, Ian J.; Reich, Peter B.; Pierce, Simon; Diaz, Sandra; Pakeman, Robin J.; Rusch, Graciela M.; Bernard-Verdier, Maud; Testi, Baptiste; Bakker, Jan P.; Bekker, Renee M.; Cerabolini, Bruno E. L.; Ceriani, Roberta M.; Cornu, Guillaume; Cruz, Pablo; Delcamp, Matthieu; Dolezal, Jiri; Eriksson, Ove; Fayolle, Adeline; Freitas, Helena; Golodets, Carly; Gourlet-Fleury, Sylvie; Hodgson, John G.; Brusa, Guido; Kleyer, Michael; Kunzmann, Dieter; Lavorel, Sandra; Papanastasis, Vasilios P.; Perez-Harguindeguy, Natalia; Vendramini, Fernanda; Weiher, Evan

    In plant leaves, resource use follows a trade-off between rapid resource capture and conservative storage. This "worldwide leaf economics spectrum" consists of a suite of intercorrelated leaf traits, among which leaf mass per area, LMA, is one of the most fundamental as it indicates the cost of leaf

  18. An ancestral stomatal patterning module revealed in the non-vascular land plant Physcomitrella patens

    Science.gov (United States)

    Chater, Caspar C.; Kamisugi, Yasuko

    2016-01-01

    The patterning of stomata plays a vital role in plant development and has emerged as a paradigm for the role of peptide signals in the spatial control of cellular differentiation. Research in Arabidopsis has identified a series of epidermal patterning factors (EPFs), which interact with an array of membrane-localised receptors and associated proteins (encoded by ERECTA and TMM genes) to control stomatal density and distribution. However, although it is well-established that stomata arose very early in the evolution of land plants, until now it has been unclear whether the established angiosperm stomatal patterning system represented by the EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Here, we use molecular genetics to show that the moss Physcomitrella patens has conserved homologues of angiosperm EPF, TMM and at least one ERECTA gene that function together to permit the correct patterning of stomata and that, moreover, elements of the module retain function when transferred to Arabidopsis. Our data characterise the stomatal patterning system in an evolutionarily distinct branch of plants and support the hypothesis that the EPF/TMM/ERECTA module represents an ancient patterning system. PMID:27407102

  19. Ecologic and geographic distributions of the vascular plants of southern Nye County, and adjacent parts of Clark, Lincoln, and Esmeralda Counties, Nevada. [Based on collections made in 1970

    Energy Technology Data Exchange (ETDEWEB)

    Beatley, J. C.

    1971-01-01

    A catalog is compiled of the vascular plants indiginous to Nye, Clark, Lincoln, and Esmeralda Counties of Nevada based on collections made in 1970. This compilation is an update of previous collections in these areas and is a supplement to report, UCLA--12-705. (ERB)

  20. Wild vascular plants gathered for consumption in the Polish countryside: a review

    Directory of Open Access Journals (Sweden)

    Szymański Wojciech M

    2007-04-01

    Full Text Available Abstract Background This paper is an ethnobotanical review of wild edible plants gathered for consumption from the end of the 18th century to the present day, within the present borders of Poland. Methods 42 ethnographic and botanical sources documenting the culinary use of wild plants were analyzed. Results The use of 112 species (3.7% of the flora has been recorded. Only half of them have been used since the 1960s. Three species: Cirsium rivulare, Euphorbia peplus and Scirpus sylvaticus have never before been reported as edible by ethnobotanical literature. The list of wild edible plants which are still commonly gathered includes only two green vegetables (Rumex acetosa leaves for soups and Oxalis acetosella as children's snack, 15 folk species of fruits and seeds (Crataegus spp., Corylus avellana, Fagus sylvatica, Fragaria vesca, Malus domestica, Prunus spinosa, Pyrus spp., Rosa canina, Rubus idaeus, Rubus sect. Rubus, Sambucus nigra, Vaccinium myrtillus, V. oxycoccos, V. uliginosum, V. vitis-idaea and four taxa used for seasoning or as preservatives (Armoracia rusticana root and leaves, Carum carvi seeds, Juniperus communis pseudo-fruits and Quercus spp. leaves. The use of other species is either forgotten or very rare. In the past, several species were used for food in times of scarcity, most commonly Chenopodium album, Urtica dioica, U. urens, Elymus repens, Oxalis acetosella and Cirsium spp., but now the use of wild plants is mainly restricted to raw consumption or making juices, jams, wines and other preserves. The history of the gradual disappearance of the original barszcz, Heracleum sphondylium soup, from Polish cuisine has been researched in detail and two, previously unpublished, instances of its use in the 20th century have been found in the Carpathians. An increase in the culinary use of some wild plants due to media publications can be observed. Conclusion Poland can be characterized as a country where the traditions of culinary

  1. Wild vascular plants gathered for consumption in the Polish countryside: a review.

    Science.gov (United States)

    Łuczaj, Łukasz; Szymański, Wojciech M

    2007-04-15

    This paper is an ethnobotanical review of wild edible plants gathered for consumption from the end of the 18th century to the present day, within the present borders of Poland. 42 ethnographic and botanical sources documenting the culinary use of wild plants were analyzed. The use of 112 species (3.7% of the flora) has been recorded. Only half of them have been used since the 1960s. Three species: Cirsium rivulare, Euphorbia peplus and Scirpus sylvaticus have never before been reported as edible by ethnobotanical literature. The list of wild edible plants which are still commonly gathered includes only two green vegetables (Rumex acetosa leaves for soups and Oxalis acetosella as children's snack), 15 folk species of fruits and seeds (Crataegus spp., Corylus avellana, Fagus sylvatica, Fragaria vesca, Malus domestica, Prunus spinosa, Pyrus spp., Rosa canina, Rubus idaeus, Rubus sect. Rubus, Sambucus nigra, Vaccinium myrtillus, V. oxycoccos, V. uliginosum, V. vitis-idaea) and four taxa used for seasoning or as preservatives (Armoracia rusticana root and leaves, Carum carvi seeds, Juniperus communis pseudo-fruits and Quercus spp. leaves). The use of other species is either forgotten or very rare. In the past, several species were used for food in times of scarcity, most commonly Chenopodium album, Urtica dioica, U. urens, Elymus repens, Oxalis acetosella and Cirsium spp., but now the use of wild plants is mainly restricted to raw consumption or making juices, jams, wines and other preserves. The history of the gradual disappearance of the original barszcz, Heracleum sphondylium soup, from Polish cuisine has been researched in detail and two, previously unpublished, instances of its use in the 20th century have been found in the Carpathians. An increase in the culinary use of some wild plants due to media publications can be observed. Poland can be characterized as a country where the traditions of culinary use of wild plants became impoverished very early, compared to

  2. Species traits and their non-additive interactions control the water economy of bryophyte cushions.

    NARCIS (Netherlands)

    Michel, P.; Lee, W.G.; During, H.J.; Cornelissen, J.H.C.; van der Putten, W.H.

    2012-01-01

    1. Ecological processes in mixed-species assemblages are not always an additive function of those in monocultures. In areas with high ground cover of bryophytes, renowned for their considerable water retention capacity, non-additive interactions in mixed-species cushions could play a key role in the

  3. Species richness and origin of the bryophyte flora of the Colombian Andes

    NARCIS (Netherlands)

    Gradstein, S.R.; Reenen, van G.B.A.; Griffin, D.

    1988-01-01

    Based on data from the ECOANDES project, a phytogeographical analysis has been made of the bryophyte flora along the wet, foggy western slope (1000-4500 m) and the drier eastern slope (500-4500 m) of the Colombian Central Cordillera at the ‘Parque de los Nevados’. Species richness increases with

  4. Preliminary estimation of bryophyte biomass and carbon pool from three contrasting different vegetation types

    Czech Academy of Sciences Publication Activity Database

    Singh, M.K.; Juhász, A.; Csintalan, Z.; Kaligaric, M.; Marek, Michal V.; Urban, Otmar; Tuba, Z.

    2005-01-01

    Roč. 33, č. 1 (2005), s. 267-270 ISSN 0133-3720 Grant - others:EU(CZ) HPRI-CT-2002-00197 Institutional research plan: CEZ:AV0Z60870520 Keywords : bryophyte * carbon pool * rain forest Subject RIV: EH - Ecology, Behaviour Impact factor: 0.320, year: 2005

  5. Bryophytes from restinga in Setiba State Park, Espírito Santo State, Brazil

    OpenAIRE

    Visnadi, Sandra Regina; Vital, Daniel Moreira

    1995-01-01

    A total of 34 bryophyte species were identified (25 hepatics, 9 mosses) from restinga at Setiba State Park, Guarapari Municipality, Espírito Santo State, Brazil. Several species reported previously from restinga appear to be erroneous records, based on misidentification.

  6. Global estimate of lichen and bryophyte contributions to forest precipitation interception

    Science.gov (United States)

    Van Stan, John; Porada, Philipp; Kleidon, Axel

    2017-04-01

    Interception of precipitation by forest canopies plays an important role in its partitioning to evaporation, transpiration and runoff. Field observations show arboreal lichens and bryophytes can substantially enhance forests' precipitation storage and evaporation. However, representations of canopy interception in global land surface models currently ignore arboreal lichen and bryophyte contributions. This study uses the lichen and bryophyte model (LiBry) to provide the first process-based modelling approach estimating these organisms' contributions to canopy water storage and evaporation. The global mean value of forest water storage capacity increased significantly from 0.87 mm to 1.33 mm by the inclusion of arboreal poikilohydric organisms. Global forest canopy evaporation of intercepted precipitation was also greatly enhanced by 44%. Ratio of total versus bare canopy global evaporation exceeded 2 in many forested regions. This altered global patterns in canopy water storage, evaporation, and ultimately the proportion of rainfall evaporated. A sensitivity analysis was also performed. Results indicate rainfall interception is of larger magnitude than previously reported by global land surface modelling work because of the important role of lichen and bryophytes in rainfall interception.

  7. Up in the tree--the overlooked richness of bryophytes and lichens in tree crowns.

    Directory of Open Access Journals (Sweden)

    Steffen Boch

    Full Text Available Assessing diversity is among the major tasks in ecology and conservation science. In ecological and conservation studies, epiphytic cryptogams are usually sampled up to accessible heights in forests. Thus, their diversity, especially of canopy specialists, likely is underestimated. If the proportion of those species differs among forest types, plot-based diversity assessments are biased and may result in misleading conservation recommendations. We sampled bryophytes and lichens in 30 forest plots of 20 m × 20 m in three German regions, considering all substrates, and including epiphytic litter fall. First, the sampling of epiphytic species was restricted to the lower 2 m of trees and shrubs. Then, on one representative tree per plot, we additionally recorded epiphytic species in the crown, using tree climbing techniques. Per tree, on average 54% of lichen and 20% of bryophyte species were overlooked if the crown was not been included. After sampling all substrates per plot, including the bark of all shrubs and trees, still 38% of the lichen and 4% of the bryophyte species were overlooked if the tree crown of the sampled tree was not included. The number of overlooked lichen species varied strongly among regions. Furthermore, the number of overlooked bryophyte and lichen species per plot was higher in European beech than in coniferous stands and increased with increasing diameter at breast height of the sampled tree. Thus, our results indicate a bias of comparative studies which might have led to misleading conservation recommendations of plot-based diversity assessments.

  8. Up in the Tree – The Overlooked Richness of Bryophytes and Lichens in Tree Crowns

    Science.gov (United States)

    Boch, Steffen; Müller, Jörg; Prati, Daniel; Blaser, Stefan; Fischer, Markus

    2013-01-01

    Assessing diversity is among the major tasks in ecology and conservation science. In ecological and conservation studies, epiphytic cryptogams are usually sampled up to accessible heights in forests. Thus, their diversity, especially of canopy specialists, likely is underestimated. If the proportion of those species differs among forest types, plot-based diversity assessments are biased and may result in misleading conservation recommendations. We sampled bryophytes and lichens in 30 forest plots of 20 m × 20 m in three German regions, considering all substrates, and including epiphytic litter fall. First, the sampling of epiphytic species was restricted to the lower 2 m of trees and shrubs. Then, on one representative tree per plot, we additionally recorded epiphytic species in the crown, using tree climbing techniques. Per tree, on average 54% of lichen and 20% of bryophyte species were overlooked if the crown was not been included. After sampling all substrates per plot, including the bark of all shrubs and trees, still 38% of the lichen and 4% of the bryophyte species were overlooked if the tree crown of the sampled tree was not included. The number of overlooked lichen species varied strongly among regions. Furthermore, the number of overlooked bryophyte and lichen species per plot was higher in European beech than in coniferous stands and increased with increasing diameter at breast height of the sampled tree. Thus, our results indicate a bias of comparative studies which might have led to misleading conservation recommendations of plot-based diversity assessments. PMID:24358373

  9. Up in the tree--the overlooked richness of bryophytes and lichens in tree crowns.

    Science.gov (United States)

    Boch, Steffen; Müller, Jörg; Prati, Daniel; Blaser, Stefan; Fischer, Markus

    2013-01-01

    Assessing diversity is among the major tasks in ecology and conservation science. In ecological and conservation studies, epiphytic cryptogams are usually sampled up to accessible heights in forests. Thus, their diversity, especially of canopy specialists, likely is underestimated. If the proportion of those species differs among forest types, plot-based diversity assessments are biased and may result in misleading conservation recommendations. We sampled bryophytes and lichens in 30 forest plots of 20 m × 20 m in three German regions, considering all substrates, and including epiphytic litter fall. First, the sampling of epiphytic species was restricted to the lower 2 m of trees and shrubs. Then, on one representative tree per plot, we additionally recorded epiphytic species in the crown, using tree climbing techniques. Per tree, on average 54% of lichen and 20% of bryophyte species were overlooked if the crown was not been included. After sampling all substrates per plot, including the bark of all shrubs and trees, still 38% of the lichen and 4% of the bryophyte species were overlooked if the tree crown of the sampled tree was not included. The number of overlooked lichen species varied strongly among regions. Furthermore, the number of overlooked bryophyte and lichen species per plot was higher in European beech than in coniferous stands and increased with increasing diameter at breast height of the sampled tree. Thus, our results indicate a bias of comparative studies which might have led to misleading conservation recommendations of plot-based diversity assessments.

  10. Bryophyte flora on the northern slopes of Zlatar Mountain (Southwest Serbia

    Directory of Open Access Journals (Sweden)

    Veljić M.

    2008-01-01

    Full Text Available This work presents a contribution to knowledge of the bryophyte flora of Zlatar Mountain. A total of 127 taxa from 35 families were identified. The hepatics are represented by 18 and mosses by 109 taxa. Representatives of the Holarctic distribution type and the temperate floristic category are highly present the investigated area.

  11. Antibacterial activity of some bryophytes used traditionally for the treatment of burn infections.

    Science.gov (United States)

    Singh, Meenakshi; Singh, Shweta; Nath, Virendra; Sahu, Vinay; Rawat, Ajay Kumar Singh

    2011-05-01

    Plagiochasma appendiculatum L. & L. (Aytoniaceae), Conocephalum conicum (L.) Necker (Conocephalaceae), Bryum argenteum Hedw. (Bryaceae), and Mnium marginatum (With.) P. Beauv. (Mniaceae) are bryophytes (liverworts and mosses) used by traditional healers for the treatment of burn, cuts, wounds, and skin disorders. This study evaluated the antibacterial activity of four bryophytes against some common bacteria responsible for burn infections. Different fractions of bryophytes were screened using the disc diffusion (qualitative) and broth microdilution (quantitative) methods, according to the guidelines of the National Committee for Clinical and Laboratory Standards. Chloroform fractions of liverworts were more active against Gram negative strains while butanol fractions of mosses had significant activity against Gram positive bacteria. Staphylococcus aureus was the most sensitive strain of those tested with the butanol fraction of M. marginatum (moss), with the strongest inhibition zone of 102.92% and minimum inhibitory concentration of 30 μg mL(-1). Our findings support the use of the bryophytes in traditional medicine for burn infections because of their significant antibacterial activity.

  12. Diversity of dead wood inhabiting fungal and bryophytes in semi-natural beech forests in Europe

    NARCIS (Netherlands)

    Ódor, P.; Heilmann-Clausen, J.; Christensen, M.; Aude, E.; Dort, van K.W.; Piltaver, A.; Siller, I.; Veerkamp, M.T.; Walleyn, R.; Standovár, T.; Hees, van A.F.M.; Kosec, J.; Matocec, N.; Kraigher, H.; Grebenc, T.

    2006-01-01

    Saproxylic organisms are among the most threatened species in Europe and constitute a major conservation problem because they depend on the most important forestry product - dead wood. Diversity of fungal and bryophyte communities occurring on dead beech trees was analyzed in five European countries

  13. Water relations and gas exchange of fan bryophytes and their adaptations to microhabitats in an Asian subtropical montane cloud forest.

    Science.gov (United States)

    Song, Liang; Zhang, Yong-Jiang; Chen, Xi; Li, Su; Lu, Hua-Zheng; Wu, Chuan-Sheng; Tan, Zheng-Hong; Liu, Wen-Yao; Shi, Xian-Meng

    2015-07-01

    Fan life forms are bryophytes with shoots rising from vertical substratum that branch repeatedly in the horizontal plane to form flattened photosynthetic surfaces, which are well suited for intercepting water from moving air. However, detailed water relations, gas exchange characteristics of fan bryophytes and their adaptations to particular microhabitats remain poorly understood. In this study, we measured and analyzed microclimatic data, as well as water release curves, pressure-volume relationships and photosynthetic water and light response curves for three common fan bryophytes in an Asian subtropical montane cloud forest (SMCF). Results demonstrate high relative humidity but low light levels and temperatures in the understory, and a strong effect of fog on water availability for bryophytes in the SMCF. The facts that fan bryophytes in dry air lose most of their free water within 1 h, and a strong dependence of net photosynthesis rates on water content, imply that the transition from a hydrated, photosynthetically active state to a dry, inactive state is rapid. In addition, fan bryophytes developed relatively high cell wall elasticity and the osmoregulatory capacity to tolerate desiccation. These fan bryophytes had low light saturation and compensation point of photosynthesis, indicating shade tolerance. It is likely that fan bryophytes can flourish on tree trunks in the SMCF because of substantial annual precipitation, average relative humidity, and frequent and persistent fog, which can provide continual water sources for them to intercept. Nevertheless, the low water retention capacity and strong dependence of net photosynthesis on water content of fan bryophytes indicate a high risk of unbalanced carbon budget if the frequency and severity of drought increase in the future as predicted.

  14. Species richness of vascular plants along the climatic range of the Spanish dehesas at two spatial scales

    Directory of Open Access Journals (Sweden)

    Jose M. Garcia del Barrio

    2014-04-01

    Full Text Available Aims of study: The goals of this paper are to summarize and to compare plant species richness and floristic similarity at two spatial scales; mesohabitat (normal, eutrophic, and oligotrophic dehesas and dehesa habitat; and to establish guidelines for conserving species diversity in dehesas.Area of study: We considered four dehesa sites in the western Peninsular Spain, located along a climatic and biogeographic gradient from north to south. Main results: Average alpha richness for mesohabitats was 75.6 species, and average alpha richness for dehesa sites was 146.3. Gamma richness assessed for the overall dehesa habitat was 340.0 species. The species richness figures of normal dehesa mesohabitat were significantly lesser than of the eutrophic mesohabitat and lesser than the oligotrophic mesohabitat too. No significant differences were found for species richness among dehesa sites. We have found more dissimilarity at local scale (mesohabitat than at regional scale (habitat. Finally, the results of the similarity assessment between dehesa sites reflected both climatic and biogeographic gradients.Research highlights: An effective conservation of dehesas must take into account local and regional conditions all along their distribution range for ensuring the conservation of the main vascular plant species assemblages as well as the associated fauna.Keywords: Agroforestry systems; mesohabitat; non-parametric estimators; alpha richness; gamma richness; floristic similarity; climatic and biogeographic range.

  15. Invasive vascular plant species of oxbow lakes in south-western Poland

    Directory of Open Access Journals (Sweden)

    Spałek Krzysztof

    2015-06-01

    Full Text Available Natural water reservoirs are very valuable floristic sites in south-western Poland. Among them, the most important for the preservation of biodiversity of flora are oxbow lakes. The long-term process of human pressure on habitats of this type caused disturbances of their biological balance. Changes in the water regime, industrial development and chemisation of agriculture, especially in the period of the last two hundred years, led to systematic disappearances of localities of many plant species connected with rare habitats and also to the appearance of numerous invasive plant species. They are: Azolla filiculoides, Echinocystis lobata, Erechtites hieraciifolia, Impatiens glandulifera, I. parviflora, Reynoutria japonica, Solidago canadensis, S. gigantea and S. graminifolia. Field works were conducted in years 2005-2012.

  16. Fungal root symbionts of high-altitude vascular plants in the Himalayas

    Czech Academy of Sciences Publication Activity Database

    Kotilínek, M.; Hiiesalu, Inga; Košnar, J.; Šmilauerová, M.; Šmilauer, P.; Altman, Jan; Dvorský, Miroslav; Kopecký, Martin; Doležal, Jiří

    2017-01-01

    Roč. 7, č. 1 (2017), č. článku 6562. ISSN 2045-2322 R&D Projects: GA ČR GA13-13368S; GA ČR(CZ) GA17-19376S Institutional support: RVO:67985939 Keywords : arbuscular mycorrhiza * molecular ecology * plant ecology Subject RIV: EH - Ecology, Behaviour OBOR OECD: Ecology Impact factor: 4.259, year: 2016

  17. Crystal structure and enzymatic properties of chalcone isomerase from the Antarctic vascular plant Deschampsia antarctica Desv.

    Directory of Open Access Journals (Sweden)

    Sun-Ha Park

    Full Text Available Chalcone isomerase (CHI is an important enzyme for flavonoid biosynthesis that catalyzes the intramolecular cyclization of chalcones into (S-flavanones. CHIs have been classified into two types based on their substrate specificity. Type I CHIs use naringenin chalcone as a substrate and are found in most of plants besides legumes, whereas type II CHIs in leguminous plants can also utilize isoliquiritigenin. In this study, we found that the CHI from the Antarctic plant Deschampsia antarctica (DaCHI1 is of type I based on sequence homology but can use type II CHI substrates. To clarify the enzymatic mechanism of DaCHI1 at the molecular level, the crystal structures of unliganded DaCHI1 and isoliquiritigenin-bound DaCHI1 were determined at 2.7 and 2.1 Å resolutions, respectively. The structures revealed that isoliquiritigenin binds to the active site of DaCHI1 and induces conformational changes. Additionally, the activity assay showed that while DaCHI1 exhibits substrate preference for naringenin chalcone, it can also utilize isoliquiritigenin although the catalytic activity was relatively low. Based on these results, we propose that DaCHI1 uses various substrates to produce antioxidant flavonoids as an adaptation to oxidative stresses associated with harsh environmental conditions.

  18. Crystal structure and enzymatic properties of chalcone isomerase from the Antarctic vascular plant Deschampsia antarctica Desv.

    Science.gov (United States)

    Park, Sun-Ha; Lee, Chang Woo; Cho, Sung Mi; Lee, Hyoungseok; Park, Hyun; Lee, Jungeun; Lee, Jun Hyuck

    2018-01-01

    Chalcone isomerase (CHI) is an important enzyme for flavonoid biosynthesis that catalyzes the intramolecular cyclization of chalcones into (S)-flavanones. CHIs have been classified into two types based on their substrate specificity. Type I CHIs use naringenin chalcone as a substrate and are found in most of plants besides legumes, whereas type II CHIs in leguminous plants can also utilize isoliquiritigenin. In this study, we found that the CHI from the Antarctic plant Deschampsia antarctica (DaCHI1) is of type I based on sequence homology but can use type II CHI substrates. To clarify the enzymatic mechanism of DaCHI1 at the molecular level, the crystal structures of unliganded DaCHI1 and isoliquiritigenin-bound DaCHI1 were determined at 2.7 and 2.1 Å resolutions, respectively. The structures revealed that isoliquiritigenin binds to the active site of DaCHI1 and induces conformational changes. Additionally, the activity assay showed that while DaCHI1 exhibits substrate preference for naringenin chalcone, it can also utilize isoliquiritigenin although the catalytic activity was relatively low. Based on these results, we propose that DaCHI1 uses various substrates to produce antioxidant flavonoids as an adaptation to oxidative stresses associated with harsh environmental conditions.

  19. A Greener Arctic: Vascular Plant Litter Input in Subarctic Peat Bogs Changes Soil Invertebrate Diets and Decomposition Patterns

    Science.gov (United States)

    Krab, E. J.; Berg, M. P.; Aerts, R.; van Logtestijn, R. S. P.; Cornelissen, H. H. C.

    2014-12-01

    Climate-change-induced trends towards shrub dominance in subarctic, moss-dominated peatlands will most likely have large effects on soil carbon (C) dynamics through an input of more easily decomposable litter. The mechanisms by which this increase in vascular litter input interacts with the abundance and diet-choice of the decomposer community to alter C-processing have, however, not yet been unraveled. We used a novel 13C tracer approach to link invertebrate species composition (Collembola), abundance and species-specific feeding behavior to C-processing of vascular and peat moss litters. We incubated different litter mixtures, 100% Sphagnum moss litter, 100% Betula leaf litter, and a 50/50 mixture of both, in mesocosms for 406 days. We revealed the transfer of C from the litters to the soil invertebrate species by 13C labeling of each of the litter types and assessed 13C signatures of the invertebrates Collembola species composition differed significantly between Sphagnum and Betula litter. Within the 'single type litter' mesocosms, Collembola species showed different 13C signatures, implying species-specific differences in diet choice. Surprisingly, the species composition and Collembola abundance changed relatively little as a consequence of Betula input to a Sphagnum based system. Their diet choice, however, changed drastically; species-specific differences in diet choice disappeared and approximately 67% of the food ingested by all Collembola originated from Betula litter. Furthermore, litter decomposition patterns corresponded to these findings; mass loss of Betula increased from 16.1% to 26.2% when decomposing in combination with Sphagnum, while Sphagnum decomposed even slower in combination with Betula litter (1.9%) than alone (4.7%). This study is the first to empirically show that collective diet shifts of the peatland decomposer community from mosses towards vascular plant litter may drive altered decomposition patterns. In addition, we showed that

  20. Annotated checklist and database for vascular plants of the Jemez Mountains

    Energy Technology Data Exchange (ETDEWEB)

    Foxx, T. S.; Pierce, L.; Tierney, G. D.; Hansen, L. A.

    1998-03-01

    Studies done in the last 40 years have provided information to construct a checklist of the Jemez Mountains. The present database and checklist builds on the basic list compiled by Teralene Foxx and Gail Tierney in the early 1980s. The checklist is annotated with taxonomic information, geographic and biological information, economic uses, wildlife cover, revegetation potential, and ethnographic uses. There are nearly 1000 species that have been noted for the Jemez Mountains. This list is cross-referenced with the US Department of Agriculture Natural Resource Conservation Service PLANTS database species names and acronyms. All information will soon be available on a Web Page.

  1. Transcriptome sequencing of the Antarctic vascular plant Deschampsia antarctica Desv. under abiotic stress.

    Science.gov (United States)

    Lee, Jungeun; Noh, Eun Kyeung; Choi, Hyung-Seok; Shin, Seung Chul; Park, Hyun; Lee, Hyoungseok

    2013-03-01

    Antarctic hairgrass (Deschampsia antarctica Desv.) is the only natural grass species in the maritime Antarctic. It has been studied as an extremophile that has successfully adapted to marginal land with the harshest environment for terrestrial plants. However, limited genetic research has focused on this species due to the lack of genomic resources. Here, we present the first de novo assembly of its transcriptome by massive parallel sequencing and its expression profile using D. antarctica grown under various stress conditions. Total sequence reads generated by pyrosequencing were assembled into 60,765 unigenes (28,177 contigs and 32,588 singletons). A total of 29,173 unique protein-coding genes were identified based on sequence similarities to known proteins. The combined results from all three stress conditions indicated differential expression of 3,110 genes. Quantitative reverse transcription polymerase chain reaction showed that several well-known stress-responsive genes encoding late embryogenesis abundant protein, dehydrin 1, and ice recrystallization inhibition protein were induced dramatically and that genes encoding U-box-domain-containing protein, electron transfer flavoprotein-ubiquinone, and F-box-containing protein were induced by abiotic stressors in a manner conserved with other plant species. We identified more than 2,000 simple sequence repeats that can be developed as functional molecular markers. This dataset is the most comprehensive transcriptome resource currently available for D. antarctica and is therefore expected to be an important foundation for future genetic studies of grasses and extremophiles.

  2. The use of vascular plants as traditional boat raw material by Yachai tribe in Mappi Regency

    Directory of Open Access Journals (Sweden)

    YOHANES YOSEPH RAHAWARIN

    2005-07-01

    Full Text Available This research is executed aim to know the plant species and the way of exploiting permanent wood upon which traditional boat making by Yachai tribe in Mappi regency. The Method that used in this research is descriptive method with the structural semi interview technique and direct perception in field. Result of research indicate that the tribe Yachai exploit the plant species have permanent wood upon which traditional boat as much 26 species from 14 family. There are 8 wood species which is often used for the body of boat and also own the good quality according to Yachai tribe, that is Atam (Scihizomeria serrata Hochr, Batki (Adinandra forbesii Baker. F, Chomach (Gordonia papuana Kobuski, Rupke (Tristania sp., Bao (Dillenia papuana artelli, Top (Buchanania macrocarpa Laut, Mitbo (Cordia Dichtoma Forst., and Yunun (Camnosperma brevipetiolata Volkens. While to part of oar exploit 2 wood species that is Bach (Buchanania Arborescens.Bi and Tup (Litsea ampala Merr. Yachai Tribe recognized 3 boat model owning different size measure and function, that is Junun Ramchai, Junun Pochoi and Junun Toch.

  3. Commented list of rare and protected vascular plants of inland water bodies of Estonia

    Directory of Open Access Journals (Sweden)

    Helle Mäemets

    2016-10-01

    Full Text Available This presented overview of rare and protected hydrophytes, emergent plants and hygrophytes of inland water bodies of Estonia includes 60 species. In the commented list are indicated their position in the state protection categories I–III (last version in 2014, and under the Red List of Estonia (last version in 2008; marked are Natura 2000 species of the European Union. Most typical habitats for these rare species are: I. soft-water oligotrophic and semidystrophic lakes; II. mesotrophic lakes with Najas (Caulinia flexilis and Potamogeton rutilus; III. alkaline fens and wet meadows; IV. brackish or freshwater coastal lagoons; V. undamaged river stretches; VI. open shallow littoral of the largest lakes of Peipsi (Pskovsko-Chudskoe and of Võrtsjärv. Main threats of these habitats are briefly concerned, as well as the problem of conservation value of hybrids, based on the example of Sparganium species.

  4. Migration of 137Cs in soils and its transfer to mushrooms and vascular plants in mixed forest

    International Nuclear Information System (INIS)

    Pietrzak-Flis, Z.; Radwan, I.; Rosiak, L.; Wirth, E.

    1996-01-01

    Migration of 137 Cs in the podzol soil and transfer of 137 Cs, 134 Cs and potassium from the soil to mushrooms and vascular plants in the mixed forest at the Kampinos National Park near Warsaw, Poland, was studied in 1994 at locations lying about 6 km apart. In the soil at both locations, up to about 40% of 137 Cs was present in the Of horizon and slightly less in the mixed organic/mineral OhAh horizon. The data indicate a slow vertical migration of radiocesium. Total content of 137 Cs in the soils was 3000 Bq m -2 . The enrichment of the Of horizon in 137 Cs from the decomposing mushroom fruitbodies was evaluated and it was shown that it can significantly contribute to the horizontal displacement of radiocesium. Transfer factors (TF) for mushrooms and Calluna were calculated using the concentrations of 137 Cs in the Of horizons, whereas for grass, Vaccinium myrtillus and Polypodium vulgare TF were calculated using a weighted mean concentration of 137 Cs in the nutritive horizons with organic matter as a weight

  5. Developing novel peat isotope proxies from vascular plant-dominated peatlands of New Zealand to reconstruct Southern Hemisphere climate dynamics

    Science.gov (United States)

    Roland, T.; Amesbury, M. J.; Charman, D.; Newnham, R.; Royles, J.; Griffiths, H.; Ratcliffe, J.; Rees, A.; Campbell, D.; Baisden, T.; Keller, E. D.

    2017-12-01

    The Southern Annular Mode (SAM) is a key control on the strength and position of the southern westerly winds (SWW), which are a major influence on Southern Hemisphere (SH) mid- to high-latitude climate. A shift towards a more positive SAM has occurred since the 1950s, driven by ozone layer thinning and enhanced by greenhouse gas driven warming. Although these recent changes are thought to be unprecedented over the last 1000 years, the longer-term behaviour of the SAM is poorly understood. We are developing stable isotope proxies from plant cellulose in vascular plant-dominated (Empodisma spp.) peatlands in New Zealand that we hypothesise are related to changes in past temperature (δ13C) and precipitation moisture source (δ18O). The moisture source signal is driven by the balance between Southern Ocean sources (depleted δ18O) and sub-tropical sources (enriched δ18O), reflecting the relative states of SAM and the El Niño-Southern Oscillation. We aim to provide palaeoclimatic context for the recent positive trend in the SAM, and explore the long-term relationship between the SAM and ENSO, testing the contention that tropical Pacific variability is a key influence on past and future SAM variability. Terrestrial palaeoclimate records in the Southern Hemisphere are often spatially isolated and temporally fragmented. However, New Zealand is ideally placed to test such hypotheses as it registers strong correlations between SAM, temperature and precipitation, and it straddles the zone of interaction between the SWW and sub-tropical moisture sources, reflected in a strong precipitation δ18O gradient. We report data from surface samples across New Zealand and explore the spatial and temporal patterns in stable isotopes in cellulose and water that we will use to interpret the palaeoenvironmental data. Preliminary downcore data will be used to demonstrate the efficacy of this approach to reconstructing moisture sources and temperature linked to moisture source variability.

  6. On the occurrence of bryophytes and macrolichens in different lowland rain forest types at Mabura Hill, Guyana

    OpenAIRE

    Cornelissen, J. Hans C.; Gradstein, Stephan Robbert

    1990-01-01

    A floristic and ecological study of bryophytes and macrolichens in different lowland rain forest types around Mabura Hill, Guyana, South America, yielded 170 species: 52 mosses, 82 liverworts and 36 macrolichens. Lejeuneaceae account for about 30% of the species and are the dominant cryptogamic family of the lowland rain forest. Special attention was paid to the flora of the forest canopy, by using mountaineering techniques. It appeared that 50% of the bryophyte species and 86% of the macroli...

  7. Bryophyte communities of restingas in Northeastern Brazil and their similarity to those of other restingas in the country

    OpenAIRE

    Silva, Mércia Patrícia Pereira; Zickel, Carmen Sílvia; Pôrto, Kátia Cavalcanti

    2016-01-01

    ABSTRACT Restingas are a coastal component of the Atlantic Forest. They experience high temperatures and possess soils with a low capacity to retain water, low nutrient content and high salt concentrations. Studies on bryophytes of restingas have been mostly conducted in Southeastern Brazil, and so we aimed to characterize the bryophyte flora of seven areas of restinga in the Northeastern Region and to establish their floristic affinities with other restingas in Brazil. Fifty-five species wer...

  8. Combined analysis of the chloroplast genome and transcriptome of the Antarctic vascular plant Deschampsia antarctica Desv.

    Science.gov (United States)

    Lee, Jungeun; Kang, Yoonjee; Shin, Seung Chul; Park, Hyun; Lee, Hyoungseok

    2014-01-01

    Antarctic hairgrass (Deschampsia antarctica Desv.) is the only natural grass species in the maritime Antarctic. It has been researched as an important ecological marker and as an extremophile plant for studies on stress tolerance. Despite its importance, little genomic information is available for D. antarctica. Here, we report the complete chloroplast genome, transcriptome profiles of the coding/noncoding genes, and the posttranscriptional processing by RNA editing in the chloroplast system. The complete chloroplast genome of D. antarctica is 135,362 bp in length with a typical quadripartite structure, including the large (LSC: 79,881 bp) and small (SSC: 12,519 bp) single-copy regions, separated by a pair of identical inverted repeats (IR: 21,481 bp). It contains 114 unique genes, including 81 unique protein-coding genes, 29 tRNA genes, and 4 rRNA genes. Sequence divergence analysis with other plastomes from the BEP clade of the grass family suggests a sister relationship between D. antarctica, Festuca arundinacea and Lolium perenne of the Poeae tribe, based on the whole plastome. In addition, we conducted high-resolution mapping of the chloroplast-derived transcripts. Thus, we created an expression profile for 81 protein-coding genes and identified ndhC, psbJ, rps19, psaJ, and psbA as the most highly expressed chloroplast genes. Small RNA-seq analysis identified 27 small noncoding RNAs of chloroplast origin that were preferentially located near the 5'- or 3'-ends of genes. We also found >30 RNA-editing sites in the D. antarctica chloroplast genome, with a dominance of C-to-U conversions. We assembled and characterized the complete chloroplast genome sequence of D. antarctica and investigated the features of the plastid transcriptome. These data may contribute to a better understanding of the evolution of D. antarctica within the Poaceae family for use in molecular phylogenetic studies and may also help researchers understand the characteristics of the chloroplast

  9. Migration of vascular plant species to a recent wood adjoining ancient woodland

    Directory of Open Access Journals (Sweden)

    Zbigniew Dzwonko

    2014-01-01

    Full Text Available Woodland communities can be restored by natural succession in sites adjoining ancient woodlands which can act as seed sources for trees, shrubs and woodland herbs. The influence of dominant tree species and the distance from an adjacent ancient oak-hornbeam woodland upon the floristic composition of species in a recent pine wood planted on dry rendzina soil were studied. It was found that, in spite of a 52-year long succession, the border between woods was sharp and the composition of species in the recent wood were significantly different than in the adjacent ancient woodland. Canonical correspondence analysis (CCA showed that the distance to the ancient woodland had a significant influence on species distributions in the recent wood. The numbers of species from the Querco-Fagetea class, vegetatively reproducing species and myrmecochores decreased with this distance, whereas the numbers of anemochores increased. The migration rate of many woodland species, calculated on occurrence of the farthest individuals was very slow, varying from 0.0 m year-1 to 0.38 m year-1. The restoration of the field layer vegetation in the studied pine wood was much slower than in recent deciduous woods on rich and moist soils where the migration rate of some species exceeded 1.50 m year-1. Recent woods adjacent to ancient woodlands can be more effectively colonised by woodland species only when they are dominated by broad-leaved trees with quickly decomposing litter, and the spatial continuity of these woods persists for a long period.

  10. Management of vascular wilt of lentil through host plant resistance, biological control agents and chemicals

    International Nuclear Information System (INIS)

    Rafique, K.; Rauf, C.A.; Naz, F.

    2016-01-01

    The management of devastating lentil (Lens culinaris Medik.) wilt disease was investigated through evaluation of host plant resistance, biological control agents and seed treatment with different fungicides against a known most aggressive isolate i.e. FWL12 (KP297995) of Fusarium oxysporum f. sp. lentis. The In vitro screening of germplasm (23 advanced lines and cultivars) for host resistance by root dip method revealed five cultivars viz. Markaz-09, Masoor-86, Masoor-2006, Punjab Masoor-00518 and Punjab Masoor-09 resistant with 20 to 46.67% incidence, 4.44 to 12.95% severity index and 9.60 to 24.94% yield reduction compared with highly susceptible (100% incidence) local lentil line (NARC-08-1). The later line was treated with Trichoderma species as antagonists in pot experiment by drenching. The bio-control treatment revealed maximum positive effect of T. harzianum (26.7% incidence, 8.9% severity index and 16.27% yield reduction), followed by T. viride (66.7% incidence, 17.8% severity index and 31.13% yield reduction). On inoculated untreated control, the fungus produced the characteristic wilt symptoms and significantly caused increased severity index, incidence and decreased 100% yield. In vitro evaluation of four fungicides at five concentrations (10, 20, 30, 50 and 100 ppm) revealed maximum inhibition of the test fungus with benomyl (85.9%), followed by thiophanate methyl (81.2%). Determination of the efficacy of two best fungicides viz. benomyl and thiophanate methyl in reducing wilt infection through In vivo seed treatment of NARC-08-1 in previously inoculated potting mixture revealed 100% seed germination and suppressed wilt disease, the most effective being benomyl with 6.7% incidence, 1.5% wilt severity and 17.16% yield reduction compared to the control. The study concluded that the genetic diversity already present in lentil cultivars is an important source, which could be exploited for breeding wilt resistant lentil genotypes. Moreover, being seed and

  11. Long-term addition of fertilizer, labile carbon, and fungicide alters the biomass of plant functional groups in a subarctic-alpine community

    DEFF Research Database (Denmark)

    Haugwitz-Hardenberg-Reventlow, M S; Michelsen, A.

    2011-01-01

    experiment on a subarctic-alpine fellfield dominated by woody evergreen shrubs, bryophytes, and lichens. To manipulate nutrient availability additions of NPK fertilizer, labile C, and fungicide (benomyl) were done in a fully factorial design, replicated in six blocks. The treatments were run for 10 years...... vascular plant groups. Also, limitation of soil nutrient availability caused by labile C addition decreased the relative proportion of green shoots in evergreen shrubs, although these were expected to cope better with the nutrient limitation than the opportunistic graminoids, which, by contrast, were...... unaffected. Reduced fungal biomass due to benomyl addition was accompanied by increased evergreen shrub and clubmoss biomass. Taken together, the effects of treatments were most pronounced 16 years after initiation of the experiment, but despite changes in biomass the overall plant community composition...

  12. Geographical, Temporal and Environmental Determinants of Bryophyte Species Richness in the Macaronesian Islands

    Science.gov (United States)

    Aranda, Silvia C.; Gabriel, Rosalina; Borges, Paulo A. V.; Santos, Ana M. C.; de Azevedo, Eduardo Brito; Patiño, Jairo; Hortal, Joaquín; Lobo, Jorge M.

    2014-01-01

    Species richness on oceanic islands has been related to a series of ecological factors including island size and isolation (i.e. the Equilibrium Model of Island Biogeography, EMIB), habitat diversity, climate (i.e., temperature and precipitation) and more recently island ontogeny (i.e. the General Dynamic Model of oceanic island biogeography, GDM). Here we evaluate the relationship of these factors with the diversity of bryophytes in the Macaronesian region (Azores, Madeira, Canary Islands and Cape Verde). The predictive power of EMIB, habitat diversity, climate and the GDM on total bryophyte richness, as well as moss and liverwort richness (the two dominant bryophyte groups), was evaluated through ordinary least squares regressions. After choosing the best subset of variables using inference statistics, we used partial regression analyses to identify the independent and shared effects of each model. The variables included within each model were similar for mosses and liverworts, with orographic mist layer being one of the most important predictors of richness. Models combining climate with either the GDM or habitat diversity explained most of richness variation (up to 91%). There was a high portion of shared variance between all pairwise combinations of factors in mosses, while in liverworts around half of the variability in species richness was accounted for exclusively by climate. Our results suggest that the effects of climate and habitat are strong and prevalent in this region, while geographical factors have limited influence on Macaronesian bryophyte diversity. Although climate is of great importance for liverwort richness, in mosses its effect is similar to or, at least, indiscernible from the effect of habitat diversity and, strikingly, the effect of island ontogeny. These results indicate that for highly vagile taxa on oceanic islands, the dispersal process may be less important for successful colonization than the availability of suitable ecological

  13. Bryophyte-cyanobacteria associations during primary succession in recently Deglaciated areas of Tierra del Fuego (Chile).

    Science.gov (United States)

    Arróniz-Crespo, María; Pérez-Ortega, Sergio; De Los Ríos, Asunción; Green, T G Allan; Ochoa-Hueso, Raúl; Casermeiro, Miguel Ángel; de la Cruz, María Teresa; Pintado, Ana; Palacios, David; Rozzi, Ricardo; Tysklind, Niklas; Sancho, Leopoldo G

    2014-01-01

    Bryophyte establishment represents a positive feedback process that enhances soil development in newly exposed terrain. Further, biological nitrogen (N) fixation by cyanobacteria in association with mosses can be an important supply of N to terrestrial ecosystems, however the role of these associations during post-glacial primary succession is not yet fully understood. Here, we analyzed chronosequences in front of two receding glaciers with contrasting climatic conditions (wetter vs drier) at Cordillera Darwin (Tierra del Fuego) and found that most mosses had the capacity to support an epiphytic flora of cyanobacteria and exhibited high rates of N2 fixation. Pioneer moss-cyanobacteria associations showed the highest N2 fixation rates (4.60 and 4.96 µg N g-1 bryo. d-1) very early after glacier retreat (4 and 7 years) which may help accelerate soil development under wetter conditions. In drier climate, N2 fixation on bryophyte-cyanobacteria associations was also high (0.94 and 1.42 µg N g-1 bryo. d-1) but peaked at intermediate-aged sites (26 and 66 years). N2 fixation capacity on bryophytes was primarily driven by epiphytic cyanobacteria abundance rather than community composition. Most liverworts showed low colonization and N2 fixation rates, and mosses did not exhibit consistent differences across life forms and habitat (saxicolous vs terricolous). We also found a clear relationship between cyanobacteria genera and the stages of ecological succession, but no relationship was found with host species identity. Glacier forelands in Tierra del Fuego show fast rates of soil transformation which imply large quantities of N inputs. Our results highlight the potential contribution of bryophyte-cyanobacteria associations to N accumulation during post-glacial primary succession and further describe the factors that drive N2-fixation rates in post-glacial areas with very low N deposition.

  14. Bryophyte-Cyanobacteria Associations during Primary Succession in Recently Deglaciated Areas of Tierra del Fuego (Chile)

    Science.gov (United States)

    Arróniz-Crespo, María; Pérez-Ortega, Sergio; De los Ríos, Asunción; Green, T. G. Allan; Ochoa-Hueso, Raúl; Casermeiro, Miguel Ángel; de la Cruz, María Teresa; Pintado, Ana; Palacios, David; Rozzi, Ricardo; Tysklind, Niklas; Sancho, Leopoldo G.

    2014-01-01

    Bryophyte establishment represents a positive feedback process that enhances soil development in newly exposed terrain. Further, biological nitrogen (N) fixation by cyanobacteria in association with mosses can be an important supply of N to terrestrial ecosystems, however the role of these associations during post-glacial primary succession is not yet fully understood. Here, we analyzed chronosequences in front of two receding glaciers with contrasting climatic conditions (wetter vs drier) at Cordillera Darwin (Tierra del Fuego) and found that most mosses had the capacity to support an epiphytic flora of cyanobacteria and exhibited high rates of N2 fixation. Pioneer moss-cyanobacteria associations showed the highest N2 fixation rates (4.60 and 4.96 µg N g−1 bryo. d−1) very early after glacier retreat (4 and 7 years) which may help accelerate soil development under wetter conditions. In drier climate, N2 fixation on bryophyte-cyanobacteria associations was also high (0.94 and 1.42 µg N g−1 bryo. d−1) but peaked at intermediate-aged sites (26 and 66 years). N2 fixation capacity on bryophytes was primarily driven by epiphytic cyanobacteria abundance rather than community composition. Most liverworts showed low colonization and N2 fixation rates, and mosses did not exhibit consistent differences across life forms and habitat (saxicolous vs terricolous). We also found a clear relationship between cyanobacteria genera and the stages of ecological succession, but no relationship was found with host species identity. Glacier forelands in Tierra del Fuego show fast rates of soil transformation which imply large quantities of N inputs. Our results highlight the potential contribution of bryophyte-cyanobacteria associations to N accumulation during post-glacial primary succession and further describe the factors that drive N2-fixation rates in post-glacial areas with very low N deposition. PMID:24819926

  15. A clade in the QUASIMODO2 family evolved with vascular plants and supports a role for cell wall composition in adaptation to environmental changes.

    Science.gov (United States)

    Fuentes, Sara; Pires, Nuno; Østergaard, Lars

    2010-08-01

    The evolution of plant vascular tissue is tightly linked to the evolution of specialised cell walls. Mutations in the QUASIMODO2 (QUA2) gene from Arabidopsis thaliana were previously shown to result in cell adhesion defects due to reduced levels of the cell wall component homogalacturonic acid. In this study, we provide additional information about the role of QUA2 and its closest paralogues, QUASIMODO2 LIKE1 (QUL1) and QUL2. Within the extensive QUA2 family, our phylogenetic analysis shows that these three genes form a clade that evolved with vascular plants. Consistent with a possible role of this clade in vasculature development, QUA2 is highly expressed in the vascular tissue of embryos and inflorescence stems and overexpression of QUA2 resulted in temperature-sensitive xylem collapse. Moreover, in-depth characterisation of qua2 qul1 qul2 triple mutant and 35S::QUA2 overexpression plants revealed contrasting temperature-dependent stem development with dramatic effects on stem width. Taken together, our results suggest that the QUA2-specific clade contributed to the evolution of vasculature and illustrate the important role that modification of cell wall composition plays in the adaptation to changing environmental conditions, including changes in temperature.

  16. Biomass and selected ecological factors of epiphytic bryophyte along altitudinal gradients in Southern Thailand

    Directory of Open Access Journals (Sweden)

    Sahut Chantanaorrapint

    2011-12-01

    Full Text Available Biomass of epiphytic bryophytes was investigated along three altitudinal transects in southern Thailand: TarutaoNational Park (25-700 m, Khao Nan National Park (400-1,300 m, and Khao Luang National Park (400-1,500 m. The dry weightof epiphytic bryophytes per surface area increased from 1.15 g/m2 in the lowland to a maximum 199 g/m2 at the lower montaneforests. The estimation of dry weight per hectare increased along transect from 2.4 to 620 kg. The water storing capacity ofepiphytic bryophytes was about 1.2 to 2.4 times as dry weight and was generally higher in the lower montane forest (up to1,500 l/ha than in the lowland forests. The bark pH of host trees range between 3.19 and 6.84, and show negative correlationwith the altitude (r=-0.635, p<0.05. Air temperature gradually decreases with the increasing altitude ca 0.6°C per 100 m elevation.

  17. Bryophyte-dominated biological soil crusts mitigate soil erosion in an early successional Chinese subtropical forest

    Directory of Open Access Journals (Sweden)

    S. Seitz

    2017-12-01

    Full Text Available This study investigated the development of biological soil crusts (biocrusts in an early successional subtropical forest plantation and their impact on soil erosion. Within a biodiversity and ecosystem functioning experiment in southeast China (biodiversity and ecosystem functioning (BEF China, the effect of these biocrusts on sediment delivery and runoff was assessed within micro-scale runoff plots under natural rainfall, and biocrust cover was surveyed over a 5-year period. Results showed that biocrusts occurred widely in the experimental forest ecosystem and developed from initial light cyanobacteria- and algae-dominated crusts to later-stage bryophyte-dominated crusts within only 3 years. Biocrust cover was still increasing after 6 years of tree growth. Within later-stage crusts, 25 bryophyte species were determined. Surrounding vegetation cover and terrain attributes significantly influenced the development of biocrusts. Besides high crown cover and leaf area index, the development of biocrusts was favoured by low slope gradients, slope orientations towards the incident sunlight and the altitude of the research plots. Measurements showed that bryophyte-dominated biocrusts strongly decreased soil erosion, being more effective than abiotic soil surface cover. Hence, their significant role in mitigating sediment delivery and runoff generation in mesic forest environments and their ability to quickly colonise soil surfaces after disturbance are of particular interest for soil erosion control in early-stage forest plantations.

  18. Bryophyte-dominated biological soil crusts mitigate soil erosion in an early successional Chinese subtropical forest

    Science.gov (United States)

    Seitz, Steffen; Nebel, Martin; Goebes, Philipp; Käppeler, Kathrin; Schmidt, Karsten; Shi, Xuezheng; Song, Zhengshan; Webber, Carla L.; Weber, Bettina; Scholten, Thomas

    2017-12-01

    This study investigated the development of biological soil crusts (biocrusts) in an early successional subtropical forest plantation and their impact on soil erosion. Within a biodiversity and ecosystem functioning experiment in southeast China (biodiversity and ecosystem functioning (BEF) China), the effect of these biocrusts on sediment delivery and runoff was assessed within micro-scale runoff plots under natural rainfall, and biocrust cover was surveyed over a 5-year period. Results showed that biocrusts occurred widely in the experimental forest ecosystem and developed from initial light cyanobacteria- and algae-dominated crusts to later-stage bryophyte-dominated crusts within only 3 years. Biocrust cover was still increasing after 6 years of tree growth. Within later-stage crusts, 25 bryophyte species were determined. Surrounding vegetation cover and terrain attributes significantly influenced the development of biocrusts. Besides high crown cover and leaf area index, the development of biocrusts was favoured by low slope gradients, slope orientations towards the incident sunlight and the altitude of the research plots. Measurements showed that bryophyte-dominated biocrusts strongly decreased soil erosion, being more effective than abiotic soil surface cover. Hence, their significant role in mitigating sediment delivery and runoff generation in mesic forest environments and their ability to quickly colonise soil surfaces after disturbance are of particular interest for soil erosion control in early-stage forest plantations.

  19. Effects of air pollution from road transport on growth and physiology of six transplanted bryophyte species

    International Nuclear Information System (INIS)

    Bignal, Keeley L.; Ashmore, Mike R.; Headley, Alistair D.

    2008-01-01

    Motor vehicles emit a cocktail of pollutants; however, little is known about the effects of these pollutants on bryophytes located in roadside habitats. Six bryophyte species were transplanted to either a woodland or a moorland site adjacent to a motorway, and were monitored over seven months from autumn through to spring. All species showed an increase in one or more of the following near the motorway: growth, membrane leakage, chlorophyll concentration, and nitrogen concentration. The strongest effects were observed in the first 50-100 m from the motorway: this was consistent with the nitrogen dioxide pollution profile, which decreased to background levels at a distance of 100-125 m. It is hypothesised that motor vehicle pollution was responsible for the effects observed, and that nitrogen oxides had a key influence. The observed effects may lead to changes in vegetation composition with significant implications for nature conservation and management of roadside sites. - Motor vehicle pollution has significant effects on the growth, membrane leakage, chlorophyll and nitrogen content of bryophytes

  20. The Vascular Pathogen Verticillium longisporum Does Not Affect Water Relations and Plant Responses to Drought Stress of Its Host, Brassica napus.

    Science.gov (United States)

    Lopisso, Daniel Teshome; Knüfer, Jessica; Koopmann, Birger; von Tiedemann, Andreas

    2017-04-01

    Verticillium longisporum is a host-specific vascular pathogen of oilseed rape (Brassica napus L.) that causes economic crop losses by impairing plant growth and inducing premature senescence. This study investigates whether plant damage through Verticillium stem striping is due to impaired plant water relations, whether V. longisporum affects responses of a susceptible B. napus variety to drought stress, and whether drought stress, in turn, affects plant responses to V. longisporum. Two-factorial experiments on a susceptible cultivar of B. napus infected or noninfected with V. longisporum and exposed to three watering levels (30, 60, and 100% field capacity) revealed that drought stress and V. longisporum impaired plant growth by entirely different mechanisms. Although both stresses similarly affected plant growth parameters (plant height, hypocotyl diameter, and shoot and root dry matter), infection of B. napus with V. longisporum did not affect any drought-related physiological or molecular genetic plant parameters, including transpiration rate, stomatal conductance, photosynthesis rate, water use efficiency, relative leaf water content, leaf proline content, or the expression of drought-responsive genes. Thus, this study provides comprehensive physiological and molecular genetic evidence explaining the lack of wilt symptoms in B. napus infected with V. longisporum. Likewise, drought tolerance of B. napus was unaffected by V. longisporum, as was the level of disease by drought conditions, thus excluding a concerted action of both stresses in the field. Although it is evident that drought and vascular infection with V. longisporum impair plant growth by different mechanisms, it remains to be determined by which other factors V. longisporum causes crop loss.

  1. Historical nitrogen content of bryophyte tissue as an indicator of increased nitrogen deposition in the Cape Metropolitan Area, South Africa

    International Nuclear Information System (INIS)

    Wilson, D.; Stock, W.D.; Hedderson, T.

    2009-01-01

    Information on changes in precipitation chemistry in the rapidly expanding Cape Metropolitan Area (CMA) of South Africa is scarce. To obtain a long-term record of N deposition we investigated changes in moss foliar N, C:N ratios and nitrogen isotope values that might reflect precipitation chemistry. Tissue from 9 species was obtained from herbarium specimens collected between 1875 and 2000 while field samples were collected in 2001/2002. There is a strong trend of increasing foliar N content in all mosses collected over the past century (1.32-1.69 %N). Differences exist between ectohydric mosses which have higher foliar N than the mixohydric group. C:N ratios declined while foliar δ 15 N values showed no distinct pattern. From relationships between moss tissue N and N deposition rates we estimated an increase of 6-13 kg N ha -1 a -1 since 1950. Enhanced N deposition rates of this magnitude could lead to biodiversity losses in native ecosystems. - This study of bryophyte tissue nutrient contents shows a historical increase in N deposition rates to the low nutrient adapted plant biodiversity hotspot in the Western Cape, South Africa

  2. Historical nitrogen content of bryophyte tissue as an indicator of increased nitrogen deposition in the Cape Metropolitan Area, South Africa

    Energy Technology Data Exchange (ETDEWEB)

    Wilson, D. [Botany Department, University of Cape Town, Rondebosch 7701 (South Africa); Stock, W.D. [Botany Department, University of Cape Town, Rondebosch 7701 (South Africa); Centre for Ecosystem Management, School of Natural Sciences, Edith Cowan University, 100 Joondalup Drive, Joondalup, Perth, WA 6027 (Australia)], E-mail: w.stock@ecu.edu.au; Hedderson, T. [Botany Department, University of Cape Town, Rondebosch 7701 (South Africa)

    2009-03-15

    Information on changes in precipitation chemistry in the rapidly expanding Cape Metropolitan Area (CMA) of South Africa is scarce. To obtain a long-term record of N deposition we investigated changes in moss foliar N, C:N ratios and nitrogen isotope values that might reflect precipitation chemistry. Tissue from 9 species was obtained from herbarium specimens collected between 1875 and 2000 while field samples were collected in 2001/2002. There is a strong trend of increasing foliar N content in all mosses collected over the past century (1.32-1.69 %N). Differences exist between ectohydric mosses which have higher foliar N than the mixohydric group. C:N ratios declined while foliar {delta}{sup 15}N values showed no distinct pattern. From relationships between moss tissue N and N deposition rates we estimated an increase of 6-13 kg N ha{sup -1} a{sup -1} since 1950. Enhanced N deposition rates of this magnitude could lead to biodiversity losses in native ecosystems. - This study of bryophyte tissue nutrient contents shows a historical increase in N deposition rates to the low nutrient adapted plant biodiversity hotspot in the Western Cape, South Africa.

  3. DNA Barcoding the Canadian Arctic Flora: Core Plastid Barcodes (rbcL + matK) for 490 Vascular Plant Species

    Science.gov (United States)

    Saarela, Jeffery M.; Sokoloff, Paul C.; Gillespie, Lynn J.; Consaul, Laurie L.; Bull, Roger D.

    2013-01-01

    Accurate identification of Arctic plant species is critical for understanding potential climate-induced changes in their diversity and distributions. To facilitate rapid identification we generated DNA barcodes for the core plastid barcode loci (rbcL and matK) for 490 vascular plant species, representing nearly half of the Canadian Arctic flora and 93% of the flora of the Canadian Arctic Archipelago. Sequence recovery was higher for rbcL than matK (93% and 81%), and rbcL was easier to recover than matK from herbarium specimens (92% and 77%). Distance-based and sequence-similarity analyses of combined rbcL + matK data discriminate 97% of genera, 56% of species, and 7% of infraspecific taxa. There is a significant negative correlation between the number of species sampled per genus and the percent species resolution per genus. We characterize barcode variation in detail in the ten largest genera sampled (Carex, Draba, Festuca, Pedicularis, Poa, Potentilla, Puccinellia, Ranunculus, Salix, and Saxifraga) in the context of their phylogenetic relationships and taxonomy. Discrimination with the core barcode loci in these genera ranges from 0% in Salix to 85% in Carex. Haplotype variation in multiple genera does not correspond to species boundaries, including Taraxacum, in which the distribution of plastid haplotypes among Arctic species is consistent with plastid variation documented in non-Arctic species. Introgression of Poa glauca plastid DNA into multiple individuals of P. hartzii is problematic for identification of these species with DNA barcodes. Of three supplementary barcode loci (psbA–trnH, psbK–psbI, atpF–atpH) collected for a subset of Poa and Puccinellia species, only atpF–atpH improved discrimination in Puccinellia, compared with rbcL and matK. Variation in matK in Vaccinium uliginosum and rbcL in Saxifraga oppositifolia corresponds to variation in other loci used to characterize the phylogeographic histories of these Arctic-alpine species. PMID

  4. The moss Funaria hygrometrica has cuticular wax similar to vascular plants, with distinct composition on leafy gametophyte, calyptra and sporophyte capsule surfaces.

    Science.gov (United States)

    Busta, Lucas; Budke, Jessica M; Jetter, Reinhard

    2016-09-01

    Aerial surfaces of land plants are covered with a waxy cuticle to protect against water loss. The amount and composition of cuticular waxes on moss surfaces had rarely been investigated. Accordingly, the degree of similarity between moss and vascular plant waxes, and between maternal and offspring moss structure waxes is unknown. To resolve these issues, this study aimed at providing a comprehensive analysis of the waxes on the leafy gametophyte, gametophyte calyptra and sporophyte capsule of the moss Funaria hygrometrica Waxes were extracted from the surfaces of leafy gametophytes, gametophyte calyptrae and sporophyte capsules, separated by gas chromatography, identified qualitatively with mass spectrometry, and quantified with flame ionization detection. Diagnostic mass spectral peaks were used to determine the isomer composition of wax esters. The surfaces of the leafy gametophyte, calyptra and sporophyte capsule of F. hygrometrica were covered with 0·94, 2·0 and 0·44 μg cm(-2) wax, respectively. While each wax mixture was composed of mainly fatty acid alkyl esters, the waxes from maternal and offspring structures had unique compositional markers. β-Hydroxy fatty acid alkyl esters were limited to the leafy gametophyte and calyptra, while alkanes, aldehydes and diol esters were restricted to the sporophyte capsule. Ubiquitous fatty acids, alcohols, fatty acid alkyl esters, aldehydes and alkanes were all found on at least one surface. This is the first study to determine wax coverage (μg cm(-2)) on a moss surface, enabling direct comparisons with vascular plants, which were shown to have an equal amount or more wax than F. hygrometrica Wax ester biosynthesis is of particular importance in this species, and the ester-forming enzyme(s) in different parts of the moss may have different substrate preferences. Furthermore, the alkane-forming wax biosynthesis pathway, found widely in vascular plants, is active in the sporophyte capsule, but not in the leafy

  5. Potential Responses of Vascular Plants from the Pristine "Lost World" of the Neotropical Guayana Highlands to Global Warming: Review and New Perspectives.

    Science.gov (United States)

    Rull, Valentí; Vegas-Vilarrúbia, Teresa

    2017-01-01

    The neotropical Guayana Highlands (GH) are one of the few remaining pristine environments on Earth, and they host amazing biodiversity with a high degree endemism, especially among vascular plants. Despite the lack of direct human disturbance, GH plants and their communities are threatened with extinction from habitat loss due to global warming (GW). Geographic information systems simulations involving the entire known vascular GH flora (>2430 species) predict potential GW-driven extinctions on the order of 80% by the end of this century, including nearly half of the endemic species. These estimates and the assessment of an environmental impact value for each species led to the hierarchization of plants by their risk of habitat loss and the definition of priority conservation categories. However, the predictions assume that all species will respond to GW by migrating upward and at equal rates, which is unlikely, so current estimates should be considered preliminary and incomplete (although they represent the best that can be done with the existing information). Other potential environmental forcings (i.e., precipitation shifts, an increase in the atmospheric CO 2 concentration) and idiosyncratic plant responses (i.e., resistance, phenotypic acclimation, rapid evolution) should also be considered, so detailed eco-physiological studies of the more threatened species are urgently needed. The main obstacles to developing such studies are the remoteness and inaccessibility of the GH and, especially, the difficulty in obtaining official permits for fieldwork.

  6. Potential Responses of Vascular Plants from the Pristine “Lost World” of the Neotropical Guayana Highlands to Global Warming: Review and New Perspectives

    Science.gov (United States)

    Rull, Valentí; Vegas-Vilarrúbia, Teresa

    2017-01-01

    The neotropical Guayana Highlands (GH) are one of the few remaining pristine environments on Earth, and they host amazing biodiversity with a high degree endemism, especially among vascular plants. Despite the lack of direct human disturbance, GH plants and their communities are threatened with extinction from habitat loss due to global warming (GW). Geographic information systems simulations involving the entire known vascular GH flora (>2430 species) predict potential GW-driven extinctions on the order of 80% by the end of this century, including nearly half of the endemic species. These estimates and the assessment of an environmental impact value for each species led to the hierarchization of plants by their risk of habitat loss and the definition of priority conservation categories. However, the predictions assume that all species will respond to GW by migrating upward and at equal rates, which is unlikely, so current estimates should be considered preliminary and incomplete (although they represent the best that can be done with the existing information). Other potential environmental forcings (i.e., precipitation shifts, an increase in the atmospheric CO2 concentration) and idiosyncratic plant responses (i.e., resistance, phenotypic acclimation, rapid evolution) should also be considered, so detailed eco-physiological studies of the more threatened species are urgently needed. The main obstacles to developing such studies are the remoteness and inaccessibility of the GH and, especially, the difficulty in obtaining official permits for fieldwork. PMID:28179913

  7. The colonization of Bacillus thuringiensis strains in bryophytes

    Czech Academy of Sciences Publication Activity Database

    Lin, Q.; Zhu, P.; Carballar-Lejarazú, R.; Gelbič, Ivan; Guan, X.; Xu, L.; Zhang, L.

    2017-01-01

    Roč. 41, č. 1 (2017), s. 41-48 ISSN 1300-0152 Institutional support: RVO:60077344 Keywords : Bacillus thuringiensis * GFP * plant colonization Subject RIV: EE - Microbiology, Virology OBOR OECD: Microbiology Impact factor: 1.038, year: 2016 http://journals.tubitak.gov.tr/biology/issues/biy-17-41-1/biy-41-1-5-1510-16.pdf

  8. Response of epiphytic bryophytes to simulated N deposition in a subtropical montane cloud forest in southwestern China.

    Science.gov (United States)

    Song, Liang; Liu, Wen-Yao; Ma, Wen-Zhang; Qi, Jin-Hua

    2012-11-01

    A field manipulation experiment was conducted in a subtropical montane cloud forest in southwestern China to determine the possible responses of epiphytic bryophytes to increasing nitrogen (N) deposition from community to physiology level, and to find sensitive epiphytic bryophytes that may be used as indicators for assessing the degree of N pollution. N addition had significantly negative effects on species richness and cover of the epiphytic bryophyte community. Harmful effects of high N loads were recorded for chlorophyll, growth, and vitality of the species tested. The decline of some epiphytic bryophytes may result from detrimental effects on degradation to photosynthetic pigments. Bazzania himalayana (Mitt.) Schiffn., Bazzania ovistipula (Steph.) Mizut., and Homaliodendron flabellatum (Sm.) Fleisch. are candidates in atmospheric nitrogen monitoring. Epiphytic bryophytes in the montane cloud forest are very sensitive to increasing N deposition and often difficult to recover once they have been destroyed, providing early detection of enhanced N pollution for trees or even the whole forest ecosystem. The inference that increasing N pollution may lead to loss of biodiversity is a concern to the developing economy in western China, and should alert the government to the adverse impacts caused by increased industrial pollution during the process of China's West Development.

  9. Cross-scale analysis of the region effect on vascular plant species diversity in southern and northern European mountain ranges.

    Directory of Open Access Journals (Sweden)

    Jonathan Lenoir

    Full Text Available BACKGROUND: The divergent glacial histories of southern and northern Europe affect present-day species diversity at coarse-grained scales in these two regions, but do these effects also penetrate to the more fine-grained scales of local communities? METHODOLOGY/PRINCIPAL FINDINGS: We carried out a cross-scale analysis to address this question for vascular plants in two mountain regions, the Alps in southern Europe and the Scandes in northern Europe, using environmentally paired vegetation plots in the two regions (n = 403 in each region to quantify four diversity components: (i total number of species occurring in a region (total γ-diversity, (ii number of species that could occur in a target plot after environmental filtering (habitat-specific γ-diversity, (iii pair-wise species compositional turnover between plots (plot-to-plot β-diversity and (iv number of species present per plot (plot α-diversity. We found strong region effects on total γ-diversity, habitat-specific γ-diversity and plot-to-plot β-diversity, with a greater diversity in the Alps even towards distances smaller than 50 m between plots. In contrast, there was a slightly greater plot α-diversity in the Scandes, but with a tendency towards contrasting region effects on high and low soil-acidity plots. CONCLUSIONS/SIGNIFICANCE: We conclude that there are strong regional differences between coarse-grained (landscape- to regional-scale diversity components of the flora in the Alps and the Scandes mountain ranges, but that these differences do not necessarily penetrate to the finest-grained (plot-scale diversity component, at least not on acidic soils. Our findings are consistent with the contrasting regional Quaternary histories, but we also consider alternative explanatory models. Notably, ecological sorting and habitat connectivity may play a role in the unexpected limited or reversed region effect on plot α-diversity, and may also affect the larger-scale diversity

  10. TAS3 miR390-dependent loci in non-vascular land plants: towards a comprehensive reconstruction of the gene evolutionary history

    Directory of Open Access Journals (Sweden)

    Sergey Y. Morozov

    2018-04-01

    Full Text Available Trans-acting small interfering RNAs (ta-siRNAs are transcribed from protein non-coding genomic TAS loci and belong to a plant-specific class of endogenous small RNAs. These siRNAs have been found to regulate gene expression in most taxa including seed plants, gymnosperms, ferns and mosses. In this study, bioinformatic and experimental PCR-based approaches were used as tools to analyze TAS3 and TAS6 loci in transcriptomes and genomic DNAs from representatives of evolutionary distant non-vascular plant taxa such as Bryophyta, Marchantiophyta and Anthocerotophyta. We revealed previously undiscovered TAS3 loci in plant classes Sphagnopsida and Anthocerotopsida, as well as TAS6 loci in Bryophyta classes Tetraphidiopsida, Polytrichopsida, Andreaeopsida and Takakiopsida. These data further unveil the evolutionary pathway of the miR390-dependent TAS3 loci in land plants. We also identified charophyte alga sequences coding for SUPPRESSOR OF GENE SILENCING 3 (SGS3, which is required for generation of ta-siRNAs in plants, and hypothesized that the appearance of TAS3-related sequences could take place at a very early step in evolutionary transition from charophyte algae to an earliest common ancestor of land plants.

  11. TAS3 miR390-dependent loci in non-vascular land plants: towards a comprehensive reconstruction of the gene evolutionary history.

    Science.gov (United States)

    Morozov, Sergey Y; Milyutina, Irina A; Erokhina, Tatiana N; Ozerova, Liudmila V; Troitsky, Alexey V; Solovyev, Andrey G

    2018-01-01

    Trans-acting small interfering RNAs (ta-siRNAs) are transcribed from protein non-coding genomic TAS loci and belong to a plant-specific class of endogenous small RNAs. These siRNAs have been found to regulate gene expression in most taxa including seed plants, gymnosperms, ferns and mosses. In this study, bioinformatic and experimental PCR-based approaches were used as tools to analyze TAS3 and TAS6 loci in transcriptomes and genomic DNAs from representatives of evolutionary distant non-vascular plant taxa such as Bryophyta, Marchantiophyta and Anthocerotophyta. We revealed previously undiscovered TAS3 loci in plant classes Sphagnopsida and Anthocerotopsida, as well as TAS6 loci in Bryophyta classes Tetraphidiopsida, Polytrichopsida, Andreaeopsida and Takakiopsida. These data further unveil the evolutionary pathway of the miR390-dependent TAS3 loci in land plants. We also identified charophyte alga sequences coding for SUPPRESSOR OF GENE SILENCING 3 (SGS3), which is required for generation of ta-siRNAs in plants, and hypothesized that the appearance of TAS3-related sequences could take place at a very early step in evolutionary transition from charophyte algae to an earliest common ancestor of land plants.

  12. Dominant bryophyte control over high-latitude soil temperature fluctuations predicted by heat transfer traits, field moisture regime and laws of thermal insulation.

    NARCIS (Netherlands)

    Soudzilovskaia, N.A.; Cornelissen, J.H.C.; van Bodegom, P.M.

    2013-01-01

    Bryophytes cover large territories in cold biomes, where they control soil temperature regime, and therefore permafrost, carbon and nutrient dynamics. The mechanisms of this control remain unclear. We quantified the dependence of soil temperature fluctuations under bryophyte mats on the interplay of

  13. Using herbarium-derived DNAs to assemble a large-scale DNA barcode library for the vascular plants of Canada1

    Science.gov (United States)

    Kuzmina, Maria L.; Braukmann, Thomas W. A.; Fazekas, Aron J.; Graham, Sean W.; Dewaard, Stephanie L.; Rodrigues, Anuar; Bennett, Bruce A.; Dickinson, Timothy A.; Saarela, Jeffery M.; Catling, Paul M.; Newmaster, Steven G.; Percy, Diana M.; Fenneman, Erin; Lauron-Moreau, Aurélien; Ford, Bruce; Gillespie, Lynn; Subramanyam, Ragupathy; Whitton, Jeannette; Jennings, Linda; Metsger, Deborah; Warne, Connor P.; Brown, Allison; Sears, Elizabeth; Dewaard, Jeremy R.; Zakharov, Evgeny V.; Hebert, Paul D. N.

    2017-01-01

    Premise of the study: Constructing complete, accurate plant DNA barcode reference libraries can be logistically challenging for large-scale floras. Here we demonstrate the promise and challenges of using herbarium collections for building a DNA barcode reference library for the vascular plant flora of Canada. Methods: Our study examined 20,816 specimens representing 5076 of 5190 vascular plant species in Canada (98%). For 98% of the specimens, at least one of the DNA barcode regions was recovered from the plastid loci rbcL and matK and from the nuclear ITS2 region. We used beta regression to quantify the effects of age, type of preservation, and taxonomic affiliation (family) on DNA sequence recovery. Results: Specimen age and method of preservation had significant effects on sequence recovery for all markers, but influenced some families more (e.g., Boraginaceae) than others (e.g., Asteraceae). Discussion: Our DNA barcode library represents an unparalleled resource for metagenomic and ecological genetic research working on temperate and arctic biomes. An observed decline in sequence recovery with specimen age may be associated with poor primer matches, intragenomic variation (for ITS2), or inhibitory secondary compounds in some taxa. PMID:29299394

  14. Cross-scale modelling of alien and native vascular plant species richness in Great Britain: where is geodiversity information most relevant?

    Science.gov (United States)

    Bailey, Joseph; Field, Richard; Boyd, Doreen

    2016-04-01

    We assess the scale-dependency of the relationship between biodiversity and novel geodiversity information by studying spatial patterns of native and alien (archaeophytes and neophytes) vascular plant species richness at varying spatial scales across Great Britain. Instead of using a compound geodiversity metric, we study individual geodiversity components (GDCs) to advance our understanding of which aspects of 'geodiversity' are most important and at what scale. Terrestrial native (n = 1,490) and alien (n = 1,331) vascular plant species richness was modelled across the island of Great Britain at two grain sizes and several extent radii. Various GDCs (landforms, hydrology, geology) were compiled from existing national datasets and automatically extracted landform coverage information (e.g. hollows, valleys, peaks), the latter using a digital elevation model (DEM) and geomorphometric techniques. More traditional predictors of species richness (climate, widely-used topography metrics, land cover diversity, and human population) were also incorporated. Boosted Regression Tree (BRT) models were produced at all grain sizes and extents for each species group and the dominant predictors were assessed. Models with and without geodiversity data were compared. Overarching patterns indicated a clear dominance of geodiversity information at the smallest study extent (12.5km radius) and finest grain size (1x1km), which substantially decreased for each increase in extent as the contribution of climatic variables increased. The contribution of GDCs to biodiversity models was chiefly driven by landform information from geomorphometry, but hydrology (rivers and lakes), and to a lesser extent materials (soil, superficial deposits, and geology), were important, also. GDCs added significantly to vascular plant biodiversity models in Great Britain, independently of widely-used topographic metrics, particularly for native species. The wider consideration of geodiversity alongside

  15. Forests Regenerating after Clear-Cutting Function as Habitat for Bryophyte and Lichen Species of Conservation Concern

    Science.gov (United States)

    Rudolphi, Jörgen; Gustafsson, Lena

    2011-01-01

    The majority of managed forests in Fennoscandia are younger than 70 years old but yet little is known about their potential to host rare and threatened species. In this study, we examined red-listed bryophytes and lichens in 19 young stands originating from clear-cutting (30–70 years old) in the boreal region, finding 19 red-listed species (six bryophytes and 13 lichens). We used adjoining old stands, which most likely never had been clear-cut, as reference. The old stands contained significantly more species, but when taking the amount of biological legacies (i.e., remaining deciduous trees and dead wood) from the previous forest generation into account, bryophyte species number did not differ between old and young stands, and lichen number was even higher in young stands. No dispersal effect could be detected from the old to the young stands. The amount of wetlands in the surroundings was important for bryophytes, as was the area of old forest for both lichens and bryophytes. A cardinal position of young stands to the north of old stands was beneficial to red-listed bryophytes as well as lichens. We conclude that young forest plantations may function as habitat for red-listed species, but that this depends on presence of structures from the previous forest generation, and also on qualities in the surrounding landscape. Nevertheless, at repeated clear-cuttings, a successive decrease in species populations in young production stands is likely, due to increased fragmentation and reduced substrate amounts. Retention of dead wood and deciduous trees might be efficient conservation measures. Although priority needs to be given to preservation of remnant old-growth forests, we argue that young forests rich in biological legacies and located in landscapes with high amounts of old forests may have a conservation value. PMID:21490926

  16. Contrasting land uses in Mediterranean agro-silvo-pastoral systems generated patchy diversity patterns of vascular plants and below-ground microorganisms.

    Science.gov (United States)

    Bagella, Simonetta; Filigheddu, Rossella; Caria, Maria Carmela; Girlanda, Mariangela; Roggero, Pier Paolo

    2014-12-01

    The aims of this paper were (i) to define how contrasting land uses affected plant biodiversity in Mediterranean agro-silvo-pastoral-systems across a gradient of disturbance regimes: cork oak forests, secondary grasslands, hay crops, grass covered vineyards, tilled vineyards; (ii) to determine whether these patterns mirrored those of below-ground microorganisms and whether the components of γ-diversity followed a similar model. The disturbance regimes affected plant assemblage composition. Species richness decreased with increasing land use intensity, the Shannon index showed the highest values in grasslands and hay crops. Plant assemblage composition patterns mirrored those of Basidiomycota and Ascomycota. Richness in Basidiomycota, denitrifying bacteria and microbial biomass showed the same trend as that observed for vascular plant richness. The Shannon index pattern of below-ground microorganisms was different from that of plants. The plant γ-diversity component model weakly mirrored those of Ascomycota. Patchy diversity patterns suggest that the maintenance of contrasting land uses associated with different productions typical of agro-silvo-pastoral-systems can guarantee the conservation of biodiversity. Copyright © 2014 Académie des sciences. Published by Elsevier SAS. All rights reserved.

  17. Response of Vascular Plant Communities to Harvest in Southern Appalachian Mixed-Oak Forests: Two-Year Results

    Science.gov (United States)

    Bryan W. Wender; Sharon M. Hood; David W. Smith; Shepard M. Zedaker; David L. Loftis

    1999-01-01

    A long-term study has been established to monitor the effects of seven silvicultural prescriptions on vascular flora community attributes. Treatments include a control, understory vegetation control, group selection, two levels of shelterwoods, leave-tree, and clearcut. Second growing season. post-treatment results are compared to pre-harvest values for residual~...

  18. Rhizosphere Microbiome Recruited from a Suppressive Compost Improves Plant Fitness and Increases Protection against Vascular Wilt Pathogens of Tomato

    NARCIS (Netherlands)

    Antoniou, Anastasis; Tsolakidou, Maria; Stringlis, I.; Pantelides, Iakovos

    2017-01-01

    Suppressive composts represent a sustainable approach to combat soilborne plant pathogens and an alternative to the ineffective chemical fungicides used against those. Nevertheless, suppressiveness to plant pathogens and reliability of composts are often inconsistent with unpredictable effects.

  19. Supplementary Material for: The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants

    KAUST Repository

    Hoehndorf, Robert; AlShahrani, Mona; Gkoutos, Georgios; Gosline, George; Groom, Quentin; Hamann, Thomas; Kattge, Jens; Oliveira, Sylvia de; Schmidt, Marco; Sierra, Soraya; Smets, Erik; Vos, Rutger; Weiland, Claus

    2016-01-01

    traits of plant species found in Floras. We used the Plant Ontology (PO) and the Phenotype And Trait Ontology (PATO) to extract entity-quality relationships from digitized taxon descriptions in Floras, and used a formal ontological approach based

  20. Species richness and distribution of bryophytes within different phytophysiognomies in the Chapada Diamantina region of Brazil

    Directory of Open Access Journals (Sweden)

    Emilia de Brito Valente

    2013-06-01

    Full Text Available The Chapada Diamantina ecoregion is within the caatinga (shrublands biome of Brazil. Environmental factors determine the phytophysiognomies that distinguish the ecoregion from the surrounding areas. This study aimed to investigate the distribution of bryophyte flora in this ecoregion, by phytophysiognomy and elevational zone. Analyzing specimens we collected from five municipalities in the region, together with specimens (previously collected from the region in herbaria, we identified 400 taxa. The phytophysiognomies that presented the highest species richness and the greatest numbers of exclusive taxa were forests and campos rupestres (dry, rocky grasslands, which respectively accounted for 51% and 40% of the taxa, compared with only 5% and 4%, respectively, for the caatinga and cerrado (savanna. Species richness and the numbers of exclusive taxa were highest in the lower and upper montane zones. There was a predominance of neotropical taxa and a significant number of disjunct species found in Brazil and in the Andes region. We conclude that the Chapada Diamantina region is an important center of bryophyte diversity, harboring not only a great number of species overall but also a considerable number of species exclusive to the region, primarily in forests and campos rupestres at elevations above 800 m.

  1. Plant diversity and conservation status of Himalayan Region Poonch Valley Azad Kashmir (Pakistan).

    Science.gov (United States)

    Khan, Muhammad Azam; Khan, Mir Ajab; Hussain, Mazhar; Mujtaba, Ghulam

    2014-09-01

    The plant diversity of Himalayan region has been reduced to greater extent due to environmental degradation and human exploitation. Anthropogenic disturbance was the major factor responsible for fragmentation of forest vegetation into small patches. Little research has been conducted in the Himalayan region of Poonch Valley of North eastern Pakistan with reference to plants biodiversity and its conservation. The present research was carried out to provide a checklist of vegetation for biodiversity conservation. A total of 430 vascular and 5 nonvascular plant species with 5 species of Bryophytes (5 families), 13 species of Pteridophytes (6 families), 4 species of Gymnosperms (1 family) and 413 species of angiosperms (95 families) were enumerated from the Poonch valley Azad Kashmir. The genera were classified into three categories according to the number of species. 25 plant communities with phytosociological parameters and diversity indices were reported. Present study revealed that there were 145 threatened, 30 endangered, 68 vulnerable and 47 rare species. It is recorded that extensive grazing, uprooting of plants and soil slope erosion intensify the environmental problems. Since there is maximum exploitation of vegetation, the valley showed a decline in plant diversity. The study was also indicated that the main threats to the biodiversity are expansion of settlement and army installations in the forest area of the valley. For sustainable use In-situ and Ex-situ conservation, controlled harvesting and afforestation may be the solution. Moreover, forest area should be declared prohibited for settlements and army installations.

  2. The importance of colony structure versus shoot morphology for the water balance of 22 subarctic bryophyte species

    NARCIS (Netherlands)

    Elumeeva, Tatiana G.; Soudzilovskaia, Nadejda A.; During, Heinjo J.; Cornelissen, Johannes H.C.

    Questions: What are the water economy strategies of the dominant subarctic bryophytes in terms of colony and shoot traits? Can colony water retention capacity be predicted from morphological traits of both colonies and separate shoots? Are suites of water retention traits consistently related to

  3. Supplementary Material for: The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants

    KAUST Repository

    Hoehndorf, Robert

    2016-01-01

    Abstract Background The systematic analysis of a large number of comparable plant trait data can support investigations into phylogenetics and ecological adaptation, with broad applications in evolutionary biology, agriculture, conservation, and the functioning of ecosystems. Floras, i.e., books collecting the information on all known plant species found within a region, are a potentially rich source of such plant trait data. Floras describe plant traits with a focus on morphology and other traits relevant for species identification in addition to other characteristics of plant species, such as ecological affinities, distribution, economic value, health applications, traditional uses, and so on. However, a key limitation in systematically analyzing information in Floras is the lack of a standardized vocabulary for the described traits as well as the difficulties in extracting structured information from free text. Results We have developed the Flora Phenotype Ontology (FLOPO), an ontology for describing traits of plant species found in Floras. We used the Plant Ontology (PO) and the Phenotype And Trait Ontology (PATO) to extract entity-quality relationships from digitized taxon descriptions in Floras, and used a formal ontological approach based on phenotype description patterns and automated reasoning to generate the FLOPO. The resulting ontology consists of 25,407 classes and is based on the PO and PATO. The classified ontology closely follows the structure of Plant Ontology in that the primary axis of classification is the observed plant anatomical structure, and more specific traits are then classified based on parthood and subclass relations between anatomical structures as well as subclass relations between phenotypic qualities. Conclusions The FLOPO is primarily intended as a framework based on which plant traits can be integrated computationally across all species and higher taxa of flowering plants. Importantly, it is not intended to replace established

  4. Changes in Vascular Plant Biodiversity in the Netherlands in the 20th Century Explained by their Climatic and other Environmental Characteristics

    Energy Technology Data Exchange (ETDEWEB)

    Tamis, W.L.M.; Van der Meijden, R.; Udo de Haes, H.A. [Nationaal Herbarium Nederland/Leiden University Branch, P.O. Box 9514, 2300, RA, Leiden (Netherlands); Van ' t Zelfde, M. [Institute of Environmental Sciences, Leiden University, P.O. Box 9518, 2300, RA, Leiden (Netherlands)

    2005-09-01

    In the Netherlands nation-wide databases are available with about 10 million records of occurrences of vascular plant species in the 20th century on a scale of approximately 1 km{sup 2}. These data were analysed with a view to identifying relationships between changes in botanical biodiversity and climatic and other environmental factors. Prior to analysis the data were corrected for several major forms of survey bias. The records were broken down into three periods: 1902-1949, 1975-1984 and 1985-1999. Using multiple regression analysis, differences between successive periods were related to plant functional characteristics as explanatory variables. Between the periods 1902-1949 and 1975-1984 there were small but significant increases in the presence of both thermophilic ('warm') and psychrophilic ('cold') species. However, in the final decades of the 20th century there was a marked increase in thermophilic species only, coinciding with the marked increase in ambient temperature observed during this period, evidence at least of a rapid response of Dutch flora to climate change. Urbanisation was also examined as an alternative explanation for the increase in thermophilic plant species and was found to explain only 50% of the increased presence of such species in the final decades of the 20th century. Besides temperature-related effects, the most important change during the 20th century was a strong decline in oligotrophic and a marked increase in eutrophic plant species.

  5. Rhizosphere Microbiome Recruited from a Suppressive Compost Improves Plant Fitness and Increases Protection against Vascular Wilt Pathogens of Tomato

    Science.gov (United States)

    Antoniou, Anastasis; Tsolakidou, Maria-Dimitra; Stringlis, Ioannis A.; Pantelides, Iakovos S.

    2017-01-01

    Suppressive composts represent a sustainable approach to combat soilborne plant pathogens and an alternative to the ineffective chemical fungicides used against those. Nevertheless, suppressiveness to plant pathogens and reliability of composts are often inconsistent with unpredictable effects. While suppressiveness is usually attributed to the compost’s microorganisms, the mechanisms governing microbial recruitment by the roots and the composition of selected microbial communities are not fully elucidated. Herein, the purpose of the study was to evaluate the impact of a compost on tomato plant growth and its suppressiveness against Fusarium oxysporum f. sp. lycopersici (Foxl) and Verticillium dahliae (Vd). First, growth parameters of tomato plants grown in sterile peat-based substrates including 20 and 30% sterile compost (80P/20C-ST and 70P/30C-ST) or non-sterile compost (80P/20C and 70P/30C) were evaluated in a growth room experiment. Plant height, total leaf surface, and fresh and dry weight of plants grown in the non-sterile compost mixes were increased compared to the plants grown in the sterile compost substrates, indicating the plant growth promoting activity of the compost’s microorganisms. Subsequently, compost’s suppressiveness against Foxl and Vd was evaluated with pathogenicity experiments on tomato plants grown in 70P/30C-ST and 70P/30C substrates. Disease intensity was significantly less in plants grown in the non-sterile compost than in those grown in the sterile compost substrate; AUDPC was 2.3- and 1.4-fold less for Foxl and Vd, respectively. Moreover, fungal quantification in planta demonstrated reduced colonization in plants grown in the non-sterile mixture. To further investigate these findings, we characterized the culturable microbiome attracted by the roots compared to the unplanted compost. Bacteria and fungi isolated from unplanted compost and the rhizosphere of plants were sequence-identified. Community-level analysis revealed

  6. Bryophytes use like atmospheric indicators of heavy metals in the metropolitan area of the Toluca Valley

    International Nuclear Information System (INIS)

    Poblano B, J.

    2013-01-01

    The objective of this work was to evaluate the concentration of Ti, V, Cr, Mn, Fe, Cu, Zn and Pb in species of frequent and abundant bryophytes in the Metropolitan Area of the Toluca Valley (MATV). The concentration of the studied metals was determined in two different seasons (cold-dry and warm-humid) in 11 sites of the MATV, 7 of them classified as urban areas, 2 as transition areas and 2 as protected natural areas. Only epiphyte organisms found to a superior height of 100 cm of the floor were considered and the species determination was realized in the Sciences Faculty of the Universidad Autonoma del Estado de Mexico, while the processing of the samples was carried out in the Instituto Nacional de Investigaciones Nucleares (ININ). The samples processing consisted on separating the bryophytes of the bark of the trees, later on each one of the samples was washed, milled and homogenized, at the end they were subjected to a digestion process accelerated by microwaves. The concentration of Ti, V, Cr, Mn, Fe, Cu, Zn and Pb in the bryophytes was determined applying the X-rays Fluorescence technique, using a spectrometer Tx-2000 Ital-Structures, with a detector type Si (Li), a tube of Mo (40 kV, 30 m A) with 17,4 keV like excitement energy. Each sample was analyzed six times with a counting time of 500 seconds. Additionally enrichment factors were obtained using reference soils considered as not impacted by anthropogenic activities. With the obtained results space and temporary differences were established through descriptive statistic, also the enrichment factor to infer the possible origin of the metals was calculated, as well as the sites that could represent a risk for the health. The species more frequent and abundant were F. ciliaris and L. angustata, presenting the following tendency in their metals concentration Fe>Ti>Mn>Zn>Pb>V ≅ Cu>Cr, being observed that the temporality is a factor that influences in the metals concentration and that in general F. ciliaris

  7. Hydrologic alteration affects aquatic plant assemblages in an arid-land river

    Science.gov (United States)

    Vinson, Mark; Hestmark, Bennett; Barkworth, Mary E.

    2014-01-01

    We evaluated the effects of long-term flow alteration on primary-producer assemblages. In 1962, Flaming Gorge Dam was constructed on the Green River. The Yampa River has remained an unregulated hydrologically variable river that joins the Green River 100 km downstream from Flaming Gorge Dam. In the 1960s before dam construction only sparse occurrences of two macroalgae, Cladophora and Chara, and no submerged vascular plants were recorded in the Green and Yampa rivers. In 2009–2010, aquatic plants were abundant and widespread in the Green River from the dam downstream to the confluence with the Yampa River. The assemblage consisted of six vascular species, Elodea canadensis, Myriophyllum sibiricum, Nasturtium officinale,Potamogeton crispus, Potamogeton pectinatus, and Ranunculus aquatilis, the macroalgae Chara and Cladophora, and the bryophyte, Amblystegium riparium. In the Green River downstream from the Yampa River, and in the Yampa River, only sparse patches of Chara and Cladophora growing in the splash zone on boulders were collected. We attribute the observed changes in the Green River to an increase in water transparency and a reduction in suspended and bed-load sediment and high flow disturbances. The lack of hydrophyte colonization downstream from the confluence with the Yampa River has implications for understanding tributary amelioration of dam effects and for designing more natural flow-regime schedules downstream from large dams.

  8. Increasing functional modularity with residence time in the co-distribution of native and introduced vascular plants

    Czech Academy of Sciences Publication Activity Database

    Hui, C.; Richardson, D. M.; Pyšek, Petr; Le Roux, J. J.; Kučera, T.; Jarošík, Vojtěch

    Sep 2013, č. 4 (2013), , 1-8, no-2454 ISSN 2041-1723 Institutional support: RVO:67985939 Keywords : plant invasions * nature reserves * species pool Subject RIV: EF - Botanics Impact factor: 10.742, year: 2013

  9. The vascular plant species of the Krugłe Bagno aquatic peatland complex (Łęczna – Włodawa Lakeland

    Directory of Open Access Journals (Sweden)

    Barbara Banach

    2014-09-01

    Full Text Available This paper presents the richness of vascular plant species of the Krugłe Bagno aquatic peatland complex and its structure. A field study was carried out in the growing seasons of 2008–2010. The aim of the study was to determine the species richness of the flora and its characteristics as well as to document changes in its composition taking place in successive years of the study. Based on the obtained results, it can be concluded that the stability of the qualitative and quantitative structure of the phytocoenoses and abiotic environmental factors bodes well for the maintenance of this aquatic peatland complex in good condition. However, due to the specificity of its species composition (a large proportion of stenobiontic species, it seems advisable to monitor regularly the biotic and abiotic conditions of this habitat.

  10. Ecology of some mire and bog plant communities in the Western Italian Alps

    Directory of Open Access Journals (Sweden)

    Giorgio BUFFA

    2003-02-01

    Full Text Available During a mire vegetation study, conducted mainly in the subalpine-alpine sector of the Western Italian Alps, the ecology of several plant communities and numerous moss species of this kind of vegetation was evaluated. The study area covered the Piedmontese sector of the Graian Alps, the eastern sector of the Aosta Valley as well as certain localities of the Pennine Alps, the Canavese district and the Maritime Alps. They have a rocky substratum representative of the various regional lithologies and include the main sectors characterised by the highest precipitation. Three hundred and twenty two relevées were made using the phytosociological method and the pH and the conductivity of the water table and its depth were measured directly. Cluster Analysis allowed a classification of the samples and the identification of various groups of plant communities. Ordination performed by DCA and CCA allowed us to identify the ecological features of the various plant communities by using the values of the main environmental parameters, measured directly in the field, and certain climatic parameters (altitude and mean annual precipitation available. The use of climatic parameters is an important result for identifying communities which show greater oceanicity, something that is underlined also by the presence of indicator species such as Sphagnum papillosum and S. subnitens. Furthermore the communities are arranged in a "poor-rich" gradient, and are also profoundly influenced by depth to water table which is inversely correlated to the pH. Therefore we find certain kinds of communities all with a very low water table and which are little affected by its chemistry. Other groups share the fact that the water table is outcropping or near the surface and are distinguishable for their pH values and conductivity. We discuss the different response of the bryophytes and vascular plants of these communities to the environmental parameters considered, in light of their

  11. Uranium in spring water and bryophytes at Basin Creek in central Idaho

    International Nuclear Information System (INIS)

    Shacklette, H.T.; Erdman, J.A.

    1982-01-01

    Arkosic sandstones and conglomerates of Tertiary age beneath the Challis Volcanics of Eocene age at Basin Creek, 10 km northeast of Stanley, Idaho, contain uranium-bearing vitrainized carbon fragments. The economic potential of these sandstones and conglomerates is currently being assessed. Water from 22 springs and associated bryophytes were sampled; two springs were found to contain apparently anomalous concentrations (normalized) of uranium. Water from a third spring contained slightly anomalous amounts of uranium, and two species of mosses at the spring contained anomalous uranium and high levels of both cadmium and lead. Water from a fourth spring was normal for uranium, but the moss from the water contained a moderate uranium level and highly anomalous concentrations of lead, germanium, and thallium. These results suggest that, in the Basin Creek area, moss sampling at springs may give a more reliable indication of uranium occurrence than would water sampling. (Auth.)

  12. Biological response of lichens and bryophytes to environmental pollution in the Murdochville copper mine area, Quebec

    Energy Technology Data Exchange (ETDEWEB)

    LeBlanc, F.; Robitaille, G.; Rao, D.N.

    1974-07-01

    The index of Atmospheric Purity (IAP) is a mathematical formula to correlate the lichen and bryophyte vegetation of an area with the quality of its ambient air. This IAP method has been used in the present study to determine the pollution pattern in the Murdochville Gaspe Copper Mine area, Quebec, where the environment is contaminated with emissions from a copper smelter. Sulfur dioxide, fluoride, lead, cadmium, arsenic, zinc, and copper were the contaminants found in the area. On the basis of this study, the authors concluded that the IAP method can be used for mapping heavy metal pollution more or less in the same manner and with the same degree of efficiency as it has been used for mapping SO/sub 2/ or fluoride pollution.

  13. Anhydrobiosis and programmed cell death in plants: Commonalities and Differences

    Directory of Open Access Journals (Sweden)

    Samer Singh

    2015-05-01

    Full Text Available Anhydrobiosis is an adaptive strategy of certain organisms or specialised propagules to survive in the absence of water while programmed cell death (PCD is a finely tuned cellular process of the selective elimination of targeted cell during developmental programme and perturbed biotic and abiotic conditions. Particularly during water stress both the strategies serve single purpose i.e., survival indicating PCD may also function as an adaptive process under certain conditions. During stress conditions PCD cause targeted cells death in order to keep the homeostatic balance required for the organism survival, whereas anhydrobiosis suspends cellular metabolic functions mimicking a state similar to death until reestablishment of the favourable conditions. Anhydrobiosis is commonly observed among organisms that have ability to revive their metabolism on rehydration after removal of all or almost all cellular water without damage. This feature is widely represented in terrestrial cyanobacteria and bryophytes where it is very common in both vegetative and reproductive stages of life-cycle. In the course of evolution, with the development of advanced vascular system in higher plants, anhydrobiosis was gradually lost from the vegetative phase of life-cycle. Though it is retained in resurrection plants that primarily belong to thallophytes and a small group of vascular angiosperm, it can be mostly found restricted in orthodox seeds of higher plants. On the contrary, PCD is a common process in all eukaryotes from unicellular to multicellular organisms including higher plants and mammals. In this review we discuss physiological and biochemical commonalities and differences between anhydrobiosis and PCD.

  14. Bryophytes as Teaching Materials on the Textbook of Botany (The Latter Term of Meiji to the Beginning of Showa) and Suggestions for Development of New Teaching Material

    OpenAIRE

    Sato, Takayuki; Muko, Heiwa; Ohshika, Kiyoyuki

    2007-01-01

    Bryophytes have some characteristics as teaching material, but it is very difficult to use them in secondary education. Nevertheless, from the latter term of Meiji to the beginning of Showa, there are many teaching materials for natural history.Therefore, we analyzed teaching materials on the textbook of botany that was published at the period, take suggestions for newly development of teaching material. We analyzed composition of textbooks and species of Bryophytes, and compared them to a ma...

  15. Surface reflectance of Antarctic bryophytes and protection from UV and visible light

    International Nuclear Information System (INIS)

    Robinson, S.A.; Wasley, J.; Turnbull, J.

    2000-01-01

    Full text: As well as determining the amount of solar radiation available for photosynthesis, the surface reflectance and absorptance characteristics of plants are their first defence against damaging effects of solar radiation. The solar spectrum can be damaging to plants in many ways. At shorter wavelengths, UV-B (280-320 nm) radiation can cause lesions in nucleic acid and proteins. Excess levels of visible radiation (400-750) can cause photoinhibition whilst high absorbtance of longer wavelengths (>750) leads to increases in temperature that can be detrimental in some environments. The adaptation of surface reflectance properties of vascular plants to particular environments are well known in some ecosystems. For example in desert ecosystems pubescent leaf surfaces that increase reflectance are common and have been demonstrated to be important to protection from photoinhibition. The epidermal characteristics of some plants are also known to change in absorptance, due to the accumulation of specific compounds. For example flavonoids which are effective screens against UV-B radiation, increase upon exposure to UV-B radiation. In this study we surveyed the natural variability in surface reflectance in mosses growing in continental Antarctica. Antarctica is experiencing large increases in incident UV-B radiation due to reductions in concentrations of stratospheric ozone. Additionally over the summer months (November January), when moss is exposed to direct sunlight, levels of visible solar radiation are also high, increasing the likelihood of photoinhibitory damage in moss. Our aim in this study is to describe the natural variability in the surface reflectance characteristics of moss, such that we have a baseline with which to assess future changes in response to changes in global climate, and imposed experimental treatments, and also to develop hypotheses with respect to how mosses have adapted to the cold and arid antarctic environment. Variability in surface

  16. Florabank1: a grid-based database on vascular plant distribution in the northern part of Belgium (Flanders and the Brussels Capital region

    Directory of Open Access Journals (Sweden)

    Wouter Van Landuyt

    2012-05-01

    Full Text Available Florabank1 is a database that contains distributional data on the wild flora (indigenous species, archeophytes and naturalised aliens of Flanders and the Brussels Capital Region. It holds about 3 million records of vascular plants, dating from 1800 till present. Furthermore, it includes ecological data on vascular plant species, redlist category information, Ellenberg values, legal status, global distribution, seed bank etc. The database is an initiative of “Flo.Wer” (www.plantenwerkgroep.be, the Research Institute for Nature and Forest (INBO: www.inbo.be and the National Botanic Garden of Belgium (www.br.fgov.be. Florabank aims at centralizing botanical distribution data gathered by both professional and amateur botanists and to make these data available to the benefit of nature conservation, policy and scientific research.The occurrence data contained in Florabank1 are extracted from checklists, literature and herbarium specimen information. Of survey lists, the locality name (verbatimLocality, species name, observation date and IFBL square code, the grid system used for plant mapping in Belgium (Van Rompaey 1943, is recorded. For records dating from the period 1972–2004 all pertinent botanical journals dealing with Belgian flora were systematically screened. Analysis of herbarium specimens in the collection of the National Botanic Garden of Belgium, the University of Ghent and the University of Liège provided interesting distribution knowledge concerning rare species, this information is also included in Florabank1. The data recorded before 1972 is available through the Belgian GBIF node (http://data.gbif.org/datasets/resource/10969/, not through FLORABANK1, to avoid duplication of information. A dedicated portal providing access to all published Belgian IFBL records at this moment is available at: http://projects.biodiversity.be/ifblAll data in Florabank1 is georeferenced. Every record holds the decimal centroid coordinates of the

  17. Understory Structure and Vascular Plant Diversity in Naturally Regenerated Deciduous Forests and Spruce Plantations on Similar Clear-Cuts: Implications for Forest Regeneration Strategy Selection

    Directory of Open Access Journals (Sweden)

    ZhiQiang Fang

    2014-04-01

    Full Text Available The active effect of natural regeneration on understory vegetation and diversity on clear-cut forestlands, in contrast to conifer reforestation, is still controversial. Here we investigated differences in understory vegetation by comparing naturally regenerated deciduous forests (NR and reforested spruce plantations (SP aged 20–40 years on 12 similar clear-cuts of subalpine old-growth spruce-fir forests from the eastern Tibetan Plateau. We found that 283 of the 334 vascular plant species recorded were present in NR plots, while only 264 species occurred in SP plots. This was consistent with richer species, higher cover, and stem (or shoot density of tree seedlings, shrubs, and ferns in the NR plots than in the SP plots. Moreover, understory plant diversity was limited under dense canopy cover, which occurred more frequently in the SP plots. Our findings implied that natural deciduous tree regeneration could better preserve understory vegetation and biodiversity than spruce reforestation after clear-cutting. This result further informed practices to reduce tree canopy cover for spruce plantations or to integrate natural regeneration and reforestation for clear-cuts in order to promote understory vegetation and species diversity conservation.

  18. Vascular plant species richness along environmental gradients in a cool temperate to sub-alpine mountainous zone in central Japan.

    Science.gov (United States)

    Tsujino, Riyou; Yumoto, Takakazu

    2013-03-01

    In order to clarify how vegetation types change along the environmental gradients in a cool temperate to sub-alpine mountainous zone and the determinant factors that define plant species richness, we established 360 plots (each 4 × 10 m) within which the vegetation type, species richness, elevation, topographic position index (TPI), slope inclination, and ground light index (GLI) of the natural vegetation were surveyed. Mean elevation, TPI, slope inclination, and GLI differed across vegetation types. Tree species richness was negatively correlated with elevation, whereas fern and herb species richness were positively correlated. Tree species richness was greater in the upper slope area than the lower slope area, whereas fern and herb species richness were greater in the lower slope area. Ferns and trees species richness were smaller in the open canopy, whereas herb species richness was greater in the open canopy. Vegetation types were determined firstly by elevation and secondary by topographic configurations, such as topographic position, and slope inclination. Elevation and topography were the most important factors affecting plant richness, but the most influential variables differed among plant life-form groups. Moreover, the species richness responses to these environmental gradients greatly differed among ferns, herbs, and trees.

  19. Transferability of species distribution models for the detection of an invasive alien bryophyte using imaging spectroscopy data

    Science.gov (United States)

    Skowronek, Sandra; Van De Kerchove, Ruben; Rombouts, Bjorn; Aerts, Raf; Ewald, Michael; Warrie, Jens; Schiefer, Felix; Garzon-Lopez, Carol; Hattab, Tarek; Honnay, Olivier; Lenoir, Jonathan; Rocchini, Duccio; Schmidtlein, Sebastian; Somers, Ben; Feilhauer, Hannes

    2018-06-01

    Remote sensing is a promising tool for detecting invasive alien plant species. Mapping and monitoring those species requires accurate detection. So far, most studies relied on models that are locally calibrated and validated against available field data. Consequently, detecting invasive alien species at new study areas requires the acquisition of additional field data which can be expensive and time-consuming. Model transfer might thus provide a viable alternative. Here, we mapped the distribution of the invasive alien bryophyte Campylopus introflexus to i) assess the feasibility of spatially transferring locally calibrated models for species detection between four different heathland areas in Germany and Belgium and ii) test the potential of combining calibration data from different sites in one species distribution model (SDM). In a first step, four different SDMs were locally calibrated and validated by combining field data and airborne imaging spectroscopy data with a spatial resolution ranging from 1.8 m to 4 m and a spectral resolution of about 10 nm (244 bands). A one-class classifier, Maxent, which is based on the comparison of probability densities, was used to generate all SDMs. In a second step, each model was transferred to the three other study areas and the performance of the models for predicting C. introflexus occurrences was assessed. Finally, models combining calibration data from three study areas were built and tested on the remaining fourth site. In this step, different combinations of Maxent modelling parameters were tested. For the local models, the area under the curve for a test dataset (test AUC) was between 0.57-0.78, while the test AUC for the single transfer models ranged between 0.45-0.89. For the combined models the test AUC was between 0.54-0.9. The success of transferring models calibrated in one site to another site highly depended on the respective study site; the combined models provided higher test AUC values than the locally

  20. Mapping multi-scale vascular plant richness in a forest landscape with integrated LiDAR and hyperspectral remote-sensing.

    Science.gov (United States)

    Hakkenberg, C R; Zhu, K; Peet, R K; Song, C

    2018-02-01

    The central role of floristic diversity in maintaining habitat integrity and ecosystem function has propelled efforts to map and monitor its distribution across forest landscapes. While biodiversity studies have traditionally relied largely on ground-based observations, the immensity of the task of generating accurate, repeatable, and spatially-continuous data on biodiversity patterns at large scales has stimulated the development of remote-sensing methods for scaling up from field plot measurements. One such approach is through integrated LiDAR and hyperspectral remote-sensing. However, despite their efficiencies in cost and effort, LiDAR-hyperspectral sensors are still highly constrained in structurally- and taxonomically-heterogeneous forests - especially when species' cover is smaller than the image resolution, intertwined with neighboring taxa, or otherwise obscured by overlapping canopy strata. In light of these challenges, this study goes beyond the remote characterization of upper canopy diversity to instead model total vascular plant species richness in a continuous-cover North Carolina Piedmont forest landscape. We focus on two related, but parallel, tasks. First, we demonstrate an application of predictive biodiversity mapping, using nonparametric models trained with spatially-nested field plots and aerial LiDAR-hyperspectral data, to predict spatially-explicit landscape patterns in floristic diversity across seven spatial scales between 0.01-900 m 2 . Second, we employ bivariate parametric models to test the significance of individual, remotely-sensed predictors of plant richness to determine how parameter estimates vary with scale. Cross-validated results indicate that predictive models were able to account for 15-70% of variance in plant richness, with LiDAR-derived estimates of topography and forest structural complexity, as well as spectral variance in hyperspectral imagery explaining the largest portion of variance in diversity levels. Importantly

  1. Concepts of fen and bog re-examined in relation to bryophyte cover and the acidity of surface waters

    OpenAIRE

    Eville Gorham; Jan A. Janssens

    2014-01-01

    Studies of surface-water pH and bryophyte assemblages in 440 plots from five peatland regions across northern North America reveal a very distinct, two-fold division into fens with a pH mode at 6.76-7.00, in which Amblystegiaceae are prominent, and bogs with a pH mode at 4.01-4.25, in which Sphagnaceae are dominant. The relevance of the data to past and current views on peatland classification is explored.

  2. A Guide to Alaskan Black Spruce Wetland Bryophytes: Species Specific to Delineation for Interior and South Central Regions

    Science.gov (United States)

    2008-06-01

    treatment for North American taxa is that for the new Flora of North America bryophyte volumes, by McQueen and Andrus (2007). In Alaska, a...Note: Nomenclature used in this document follows that in current use in the Flora of North America : Mosses and the TROPICOS Moss nomenclatural...in Moss Flora of North America ) includes 20 species with two varieties in the Alaskan flora. Of these, 14 are described as occurring occasionally

  3. Redox processes in the rhizosphere of restored peatlands - The impact of vascular plant species on electrochemical properties of dissolved organic matter

    Science.gov (United States)

    Agethen, Svenja; Wolff, Franziska; Knorr, Klaus-Holger

    2016-04-01

    Restoration of cut over peatlands in Central Europe is challenging in a landscape overused for agriculture. Excess nutrient availability by excess fertilization triggers uncharacteristic vegetation that is one key driver for carbon cycling. Those nutrient rich systems are often dominated by graminoids, and were often found to emit substantial amounts of methane. Plants grown under nutrient rich conditions provide more labile carbon in rhizodeposition and litter that fuels methanogenesis. Such species often have aerenchyma that facilitates direct CH4 emissions to the atmosphere and therefore impair the climate cooling function of bogs. On the other hand, aerenchymatic tissue supplies oxygen to the rhizosphere, which may reduce methanogenesis or stimulate methane oxidation, as methanogenesis is a strictly anaerobic process. Which of the effects prevail is often unclear. Therefore, the aim of this study was to test the impact of different vegetation on rhizospheric redox conditions and methanogenesis, including aerenchymatic vascular plants that are dominant in restored cut over peatlands. As ombrotrophic peat is poor in inorganic electron acceptors (EAs) to suppress methanogenesis, we analyzed the electron acceptor (EACs) and electron donor capacities (EDCs) of dissolved organic matter (DOM) in the rhizosphere to understand the impact of vegetation on anaerobic organic matter degradation. We planted Juncus effusus, Eriophorum vaginatum, Eriophorum angustifolium, Sphagnum (mixture of S. magellanicum, S. papillosum, S. sec. acutifolia, 1/3 each) plus non-vegetated controls; six replicates per batch; in containers with untreated homogenized peat. The plants grow under constant conditions (20° C, 12h diurnal light cycles and 80% RH). Anoxic conditions were achieved by keeping the water table at +10 cm. For monitoring, the rhizosphere is equipped with suction and gas samplers. We measure dissolved CO2 and CH4 concentrations, inorganic EAs (NO3-, Fe(III), and SO42-) and

  4. The effects of disturbance events on the submerged bryophyte vegetation in the streams of the tatra mountains Slovakia

    International Nuclear Information System (INIS)

    Rudolf, S.; Dana, C.; Ondrej, G.; Anna, C.

    2012-01-01

    Submerged bryophytes are often important constituents of stream vegetation. Almost the whole area of the Tatra mountains (The West Carpathians, 28 streams) has been surveyed by a large number of sampling sites (78) at altitudes between 639 - 2002 m a.s.l. The lower parts of the streams are mostly the areas with disturbance events - roads, clearings, built up areas, avalanche sites, bark beetles infection, wind-thrown trees and ski resorts. Conductivity, pH, dissolved oxygen, redox potential, chemical oxygen demand, calcium carbonate, nitrates, ammonia and chlorides were plotted as ordination axes, for their ecological interpretation, disturbance events were plotted onto CCA ordination diagram. Only bryophytes recorded = 3 times in the streams have been submitted to ordination analyses: Scapania undulata (L.) Dumort., Brachythecium rivulare B. S. G., Fontinalis antipyretica Hedw., Hygrohypnum luridum (Hedw.) Jenn., Hygrohypnum ochraceum (Wilson) Loeske, Palustriella commutata (Hedw.) Ochyra and Platyhypnidium riparioides (Hedw.) Bruch and Schimp. Correlation between disturbance events and bryophytes was seen, shown by Canonical Correspondence Analysis CCA. In the term of heavy metal accumulation, the aquatic bryoflora is relatively well investigated, this is not true in terms of nutrient preferences or tolerances. This is why we have decided to fill this knowledge gap. We have found, that natural and anthropogenic disturbance events result in extra input of nutrients. (author)

  5. The Species Richness of Vascular Plants and Amphibia in Major Plant Communities in Temperate to Tropical Australia: Relationship with Annual Biomass Production

    International Nuclear Information System (INIS)

    Specht, R. L.; Tyler, M.J.

    2010-01-01

    Aerodynamic fluxes (frictional, thermal, evaporative) in the atmosphere as it flows over and through a plant community determine the Foliage Projective Covers and eco-morphological attributes of new leaves developed annually in overstorey and understorey strata. The number of leaves produced on vertical foliage shoots depends on available soil water and nutrients, also ambient temperature, during this short growth season. Stem density (number of stems per hectare) and species richness (number of species per hectare) in the overstorey of major Floristic Groups are correlated with annual shoot growth (ASG, t ha-1) in that stratum. Species richness in the overstorey increases in the climatic gradient from the arid to the humid zone as well as with increasing air temperatures (about 10 degree C) from temperate to tropical Australia. Species richness in the understorey is highest in plant communities in temperate Australia, decreasing in the temperature gradient towards the tropics. As with other major plant and animal groups within an ecosystem, the species richness of Amphibia is correlated with the amount of solar energy fixed (per annum) by the major plant formation in the regional photosynthetic potential determined by the foliage shoots (ASG, t ha-1) produced annually in the overstorey.

  6. The Species Richness of Vascular Plants and Amphibia in Major Plant Communities in Temperate to Tropical Australia: Relationship with Annual Biomass Production

    Directory of Open Access Journals (Sweden)

    R. L. Specht

    2010-01-01

    Full Text Available Aerodynamic fluxes (frictional, thermal, evaporative in the atmosphere as it flows over and through a plant community determine the Foliage Projective Covers and eco-morphological attributes of new leaves developed annually in overstorey and understorey strata. The number of leaves produced on vertical foliage shoots depends on available soil water and nutrients, also ambient temperature, during this short growth season. Stem density (number of stems per hectare and species richness (number of species per hectare in the overstorey of major Floristic Groups are correlated with annual shoot growth (ASG, t ha−1 in that stratum. Species richness in the overstorey increases in the climatic gradient from the arid to the humid zone as well as with increasing air temperatures (about 10oC from temperate to tropical Australia. Species richness in the understorey is highest in plant communities in temperate Australia, decreasing in the temperature gradient towards the tropics. As with other major plant and animal groups within an ecosystem, the species richness of Amphibia is correlated with the amount of solar energy fixed (per annum by the major plant formation in the region—a photosynthetic potential determined by the foliage shoots (ASG, t ha−1 produced annually in the overstorey.

  7. An Internet-based platform for the estimation of outcrossing potential between cultivated and Chilean vascular plants.

    Science.gov (United States)

    Cid, Pablo; Aguirre, Carlos; Sánchez, Miguel Ángel; Zamorano, Daniel; Mihoc, Maritza; Salazar, Erika; Chacón, Gustavo; Navarrete, Humberto; Rosas, Marcelo; Prieto, Humberto

    2017-04-01

    A national-scale study of outcrossing potential within Chilean vascular flora was conducted using an upgraded algorithm, which adds parameters such as pollinator agents, climate, and geographic conditions. Datasets were organized and linked in a Web platform (www.flujogenico.cl), in which the development of a total outcrossing potential (TOP) predictor was formulated. The TOP predictor is the engine in the Web platform, which models the effect of a type of agricultural practice on others (coexistence calculation mode) and on the environment (biodiversity calculation mode). The scale for TOP results uses quintiles in order to define outcrossing potential between species as "very low," "low," "medium," "high," or "very high." In a coexistence analysis considering 256 species (207 genera), the 10 highest TOP values were for genera Citrus , Prunus , Trifolium , Brassica , Allium , Eucalyptus , Cucurbita , Solanum , Lollium , and Lotus . The highest TOP for species in this analysis fell at "high" potential, 4.9% of the determined values. In biodiversity mode, seven out of 256 cultivated species (2.7%) were native, and 249 (97.3%) corresponded to introduced species. The highest TOP was obtained in the genera Senecio , Calceolaria , Viola , Solanum , Poa , Alstroemeria , Valeriana , Vicia , Atriplex , and Campanula , showing "high" potential in 4.9% of the values. On the other hand, 137 genetically modified species, including the commercial and pre-commercial developments, were included and represented 100 genera. Among these, 22 genera had relatives (i.e., members of the same genus) in the native/introduced group. The genera with the highest number of native/introduced relatives ranged from one ( Ipomea , Limonium , Carica , Potentilla , Lotus , Castanea , and Daucus ) to 66 species ( Solanum ). The highest TOP was obtained when the same species were coincident in both groups, such as for Carica chilensis , Prosopis tamarugo , and Solanum tuberosum . Results are

  8. Constitutive expression of DaCBF7, an Antarctic vascular plant Deschampsia antarctica CBF homolog, resulted in improved cold tolerance in transgenic rice plants.

    Science.gov (United States)

    Byun, Mi Young; Lee, Jungeun; Cui, Li Hua; Kang, Yoonjee; Oh, Tae Kyung; Park, Hyun; Lee, Hyoungseok; Kim, Woo Taek

    2015-07-01

    Deschampsia antarctica is an Antarctic hairgrass that grows on the west coast of the Antarctic peninsula. In this report, we have identified and characterized a transcription factor, D. antarctica C-repeat binding factor 7 (DaCBF7), that is a member of the monocot group V CBF homologs. The protein contains a single AP2 domain, a putative nuclear localization signal, and the typical CBF signature. DaCBF7, like other monocot group V homologs, contains a distinct polypeptide stretch composed of 43 amino acids in front of the AP2 motif. DaCBF7 was predominantly localized to nuclei and interacted with the C-repeat/dehydration responsive element (CRT/DRE) core sequence (ACCGAC) in vitro. DaCBF7 was induced by abiotic stresses, including drought, cold, and salinity. To investigate its possible cellular role in cold tolerance, a transgenic rice system was employed. DaCBF7-overexpressing transgenic rice plants (Ubi:DaCBF7) exhibited markedly increased tolerance to cold stress compared to wild-type plants without growth defects; however, overexpression of DaCBF7 exerted little effect on tolerance to drought or salt stress. Transcriptome analysis of a Ubi:DaCBF7 transgenic line revealed 13 genes that were up-regulated in DaCBF7-overexpressing plants compared to wild-type plants in the absence of cold stress and in short- or long-term cold stress. Five of these genes, dehydrin, remorin, Os03g63870, Os11g34790, and Os10g22630, contained putative CRT/DRE or low-temperature responsive elements in their promoter regions. These results suggest that overexpression of DaCBF7 directly and indirectly induces diverse genes in transgenic rice plants and confers enhanced tolerance to cold stress. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  9. The role of certain infauna and vascular plants in the mediation of redox reactions in marine sediments

    Science.gov (United States)

    Hines, Mark E.

    1992-01-01

    The mechanisms by which certain animals and plants affect redox processes in sediments was examined by studying three environments: (1) subtidal sediments dominated by the deposit-feeding polychaete Heteromastus filiformis; (2) a saltmarsh inhabited by the tall form of Spartina alterniflora; and (3) tropical carbonate sediments inhabited by three species of seagrasses. S-35-sulfide production rates were compared to pool sizes of dissolved sulfide and dissolved iron. In all of the sediments studied, rates of sulfide reduction were enhanced by macroorganisms while the rate of turnover of dissolved sulfide increased. The polychaete enhanced microbial activity and redox cycling primarily by subducting particles of organic matter and oxidized iron during sediment reworking. The Spartina species enhanced anaerobic activity by transporting primarily dissolved organic matter and oxidants. Although the final result of both animal and plant activities was the enhancement of sub-surface cycling of sulfur and iron, decreased dissolved sulfide and increased dissolved iron concentrations, the mechanisms which produced these results differed dramatically.

  10. Burn Severity Dominates Understory Plant Community Response to Fire in Xeric Jack Pine Forests

    Directory of Open Access Journals (Sweden)

    Bradley D. Pinno

    2016-04-01

    Full Text Available Fire is the most common disturbance in northern boreal forests, and large fires are often associated with highly variable burn severities across the burnt area. We studied the understory plant community response to a range of burn severities and pre-fire stand age four growing seasons after the 2011 Richardson Fire in xeric jack pine forests of northern Alberta, Canada. Burn severity had the greatest impact on post-fire plant communities, while pre-fire stand age did not have a significant impact. Total plant species richness and cover decreased with disturbance severity, such that the greatest richness was in low severity burns (average 28 species per 1-m2 quadrat and plant cover was lowest in the high severity burns (average 16%. However, the response of individual plant groups differed. Lichens and bryophytes were most common in low severity burns and were effectively eliminated from the regenerating plant community at higher burn severities. In contrast, graminoid cover and richness were positively related to burn severity, while forbs did not respond significantly to burn severity, but were impacted by changes in soil chemistry with increased cover at pH >4.9. Our results indicate the importance of non-vascular plants to the overall plant community in this harsh environment and that the plant community is environmentally limited rather than recruitment or competition limited, as is often the case in more mesic forest types. If fire frequency and severity increase as predicted, we may see a shift in plant communities from stress-tolerant species, such as lichens and ericaceous shrubs, to more colonizing species, such as certain graminoids.

  11. [Altitudinal patterns of species richness and species range size of vascular plants in Xiaolong- shan Reserve of Qinling Mountain: a test of Rapoport' s rule].

    Science.gov (United States)

    Zheng, Zhi; Gong, Da-Jie; Sun, Cheng-Xiang; Li, Xiao-Jun; Li, Wan-Jiang

    2014-09-01

    Altitudinal patterns of species richness and species range size and their underlying mechanisms have long been a key topic in biogeography and biodiversity research. Rapoport's rule stated that the species richness gradually declined with the increasing altitude, while the species ranges became larger. Using altitude-distribution database from Xiaolongshan Reverse, this study explored the altitudinal patterns of vascular plant species richness and species range in Qinling Xiaolongshan Reserve, and examined the relationships between species richness and their distributional middle points in altitudinal bands for different fauna, taxonomic units and growth forms and tested the Rapoport's rule by using Stevens' method, Pagel's method, mid-point method and cross-species method. The results showed that the species richness of vascular plants except small-range species showed a unimodal pattern along the altitude in Qinling Xiaolongshan Reserve and the highest proportion of small-range species was found at the lower altitudinal bands and at the higher altitudinal bands. Due to different assemblages and examining methods, the relationships between species distributing range sizes and the altitudes were different. Increasing taxonomic units was easier to support Rapoport's rule, which was related to niche differences that the different taxonomic units occupied. The mean species range size of angiosperms showed a unimodal pattern along the altitude, while those of the gymnosperms and pteridophytes were unclearly regular. The mean species range size of the climbers was wider with the increasing altitude, while that of the shrubs which could adapt to different environmental situations was not sensitive to the change of altitude. Pagel's method was easier to support the Rapoport's rule, and then was Steven's method. On the contrary, due to the mid-domain effect, the results of the test by using the mid-point method showed that the mean species range size varied in a unimodal

  12. A Revised Similarity Law in Botanic Describes the Genesis of the Vulnerability Curve Shape in Vascular Plants

    Science.gov (United States)

    Mrad, A.; Domec, J. C.; Huang, C. W.; Katul, G. G.

    2017-12-01

    Xylem tissues are specialized in offering the least possible resistance to water flow. However, this is not guaranteed when ascending sap reaches large negative pressures during periods of water stress when embolism within the xylem occurs, an inevitable step toward potential drought-induced mortality. Ongoing research into changing forest patterns and plant survival due to droughts rarely dispute the significance of Vulnerability Curves (VCs), plots that feature loss in relative conductance with declining liquid pressure (ψ). While Earth-Systems models routinely employ various VC functions, the theoretical underpinnings describing their shape remains lacking. VCs are the outcome of microscopic phenomena describing embolism formation, bubble-scale xylem properties allowing embolism spread, and hydraulic processes that dictate the water potential along the flow path. The work here explores how the upscaled version of these gives rise to popular mathematical shapes used to describe VC measurements: The Logistic and Weibull exceedance equations. Each of these two captures a distinct type of embolism spread: The Logistic VC arises when the probability that embolized vessels interact with intact ones describe embolism spread as water pressure decreases (labeled as a similarity law in botanic [1]). The Weibull VC arises when the aforementioned description includes the effects of ψ explicitly. Variability in xylem properties along the flow path is explored analytically using novel approaches borrowed from `super-statistics' and numerical simulations. The numerical simulations intend to single out which xylem network property is significant in describing the VC shape. The model results corroborate previous research (experimental and 3-dimensional high-resolution simulations) on the effect of vessel size and network topology. It is shown that (i) initial embolism locations alter air-seeding pressure and VC slope; (ii) redundancy and size variations decrease bubble

  13. VASCULAR SURGERY

    African Journals Online (AJOL)

    2016-06-02

    Jun 2, 2016 ... with the literature from South Africa over the last four decades, and reflects the high rate of interpersonal violence in the country.14,15 As expected, cervical ... via the intact circle of Willis in young patients is the most likely explanation for the lack of strokes. Five patients were referred to the Durban vascular ...

  14. Vascular Disorders

    Science.gov (United States)

    ... All Topics A-Z Videos Infographics Symptom Picker Anatomy Bones Joints Muscles Nerves Vessels Tendons About Hand Surgery What is a Hand Surgeon? What is a Hand Therapist? Media Find a Hand Surgeon Home Anatomy Vascular Disorders Email to a friend * required fields ...

  15. Epiphytic bryophytes of Quercus forests in Central and North inland Iberian Peninsula

    Directory of Open Access Journals (Sweden)

    Nagore García Medina

    2015-04-01

    Full Text Available Diversity patterns are governed by a complex network of interacting factors. Studies directed to disentangle the most important factors affecting diversity have frequently shown divergent results, which has encouraged a rewarding debate about the relative importance of each factor. Scale dependency has been identified as a direct cause of at least part of such divergences. However, studies with spatially-explicit measurements at different scales are costly and therefore they are relatively scarce despite their importance. Here, we present a database to disentangle the cross-scale variation in the importance of factors affecting the diversity of epiphytic bryophyte communities in Quercus dominated forests (Quercus ilex L., Quercus pyrenaica Willd. and Quercus faginea Lam. in the North-western region of the Iberian Peninsula. We provide species-per-site abundance information with more than 9000 entries and an environmental table containing 20 in situ measured variables at three different scales (forest, stand, and sample. The database will help to advance the research of cross-scale effects of diversity patterns while at the same time providing valuable information on the distribution of a poorly known group of organisms. 

  16. Studies of Physcomitrella patens reveal that ethylene-mediated submergence responses arose relatively early in land-plant evolution

    KAUST Repository

    Yasumura, Yuki; Pierik, Ronald; Fricker, Mark D.; Voesenek, Laurentius A. C. J.; Harberd, Nicholas P.

    2012-01-01

    in the evolution of land plants. We also show that a major component of the bryophyte submergence response is controlled by the phytohormone ethylene, using a perception mechanism that has subsequently been conserved throughout the evolution of land plants. Thus a

  17. The evolution of development of vascular cambia and secondary growth

    Science.gov (United States)

    Andrew Groover; Rachel Spicer

    2010-01-01

    Secondary growth from vascular cambia results in radial, woody growth of stems. The innovation of secondary vascular development during plant evolution allowed the production of novel plant forms ranging from massive forest trees to flexible, woody lianas. We present examples of the extensive phylogenetic variation in secondary vascular growth and discuss current...

  18. Concepts of fen and bog re-examined in relation to bryophyte cover and the acidity of surface waters

    Directory of Open Access Journals (Sweden)

    Eville Gorham

    2014-01-01

    Full Text Available Studies of surface-water pH and bryophyte assemblages in 440 plots from five peatland regions across northern North America reveal a very distinct, two-fold division into fens with a pH mode at 6.76-7.00, in which Amblystegiaceae are prominent, and bogs with a pH mode at 4.01-4.25, in which Sphagnaceae are dominant. The relevance of the data to past and current views on peatland classification is explored.

  19. Vascular ultrasound.

    Science.gov (United States)

    Pilcher, D B; Ricci, M A

    1998-04-01

    Surgeon-interpreted diagnostic ultrasound has become the preferred screening test and often the definitive test for the diagnosis of arterial stenosis, aneurysm, and venous thrombosis. As a modality for surveillance, its noninvasive quality makes it particularly appealing as the test of choice to screen patients for abdominal aortic aneurysms or to perform follow-up examinations on those patients with a carotid endartectomy or in situ bypass grafts. The increasing reliance on intraoperative duplex imaging of vascular procedures demands that the surgeon learn the skills to perform the studies without a technologist or radiologist to interpret the examination.

  20. Paleoecological Calibration In Central Guatemala: Modern Pollen Rain From Bryophyte Polsters And Surface Sediments

    Science.gov (United States)

    Finkelstein, S. A.; Avendano, C. E.; Cowling, S. A.

    2009-05-01

    Paleoecology requires understanding the correspondences between modern pollen rain and local-regional vegetation, in order to develop accurate paleovegetation reconstructions. Paleoecology in Guatemala has been developed largely over decades in the northern lowlands in close relationship with Classic Maya archaeology, where paleoenvironmental reconstructions have been made mainly through the use of fossil pollen. Scarcity of calibration studies in the Mesoamerican region however remains evident; nevertheless, they are necessary to produce reliable reconstructions. We present calibration pollen data from two locations in Central Guatemala: Lachua Lowlands and Purulha Highlands. Pollen spectra were analyzed from surface sediments samples (SS) from a lake and a small pond in Lachua, a river floodplain and a lake shore in Purulha. Bryophyte polsters samples (BP) were collected from the interior of minimally disturbed forests in both Lachua (rain forest) and Purulha (cloud forest). Pollen spectra between SS and BP differed in both locations. Analysis per location indicates that SS were more similar for Purulha, as compared to Lachua. Combined analysis of locations indicates that SS from both locations were related to anemophilous taxa - great production of pollen quantities that has high dispersion capacities-. This provides evidence that the pollen signal from SS is probably more regional than local. BP from Lachua and Purulha differed notably in their pollen signal, each location containing local taxa, tropical and temperate respectively. Some temperate anemophilous taxa were better represented in Lachua than in Purulha. Purulha SS were similar, and contained more taxa related to disturbance and anemophilous taxa. The arboreal pollen (AP) to non-arboreal (NAP) ratio (AP/NAP) of both SS and BP corresponded with the tree- prevalent landscape in Lachua. The SS AP/NAP ratio represented the deforested landscape of the river floodplain and lake environments in Purulha

  1. The estimation of species richness of Dutch bryophytes between 1900 and 2011. Documentation of VBA-procedures based on the Frescalo program

    NARCIS (Netherlands)

    Bijlsma, R.J.

    2013-01-01

    In 2011 the Ministery of Economic Affairs, Agriculture and Innovation asked the BLWG to update the Dutch Red List of bryophytes. The Red List is derived from distribution data recorded between 1900 and 2011 on a quadrant basis (5 x 5 km squares). The Dutch recording grid for distribution data

  2. Composition and structure of the Chironomidae (Insecta: Diptera) community associated with bryophytes in a first-order stream in the Atlantic forest, Brazil.

    Science.gov (United States)

    Rosa, B F J V; Dias-Silva, M V D; Alves, R G

    2013-02-01

    This study describes the structure of the Chironomidae community associated with bryophytes in a first-order stream located in a biological reserve of the Atlantic Forest, during two seasons. Samples of bryophytes adhered to rocks along a 100-m stretch of the stream were removed with a metal blade, and 200-mL pots were filled with the samples. The numerical density (individuals per gram of dry weight), Shannon's diversity index, Pielou's evenness index, the dominance index (DI), and estimated richness were calculated for each collection period (dry and rainy). Linear regression analysis was employed to test the existence of a correlation between rainfall and the individual's density and richness. The high numerical density and richness of Chironomidae taxa observed are probably related to the peculiar conditions of the bryophyte habitat. The retention of larvae during periods of higher rainfall contributed to the high density and richness of Chironomidae larvae. The rarefaction analysis showed higher richness in the rainy season related to the greater retention of food particles. The data from this study show that bryophytes provide stable habitats for the colonization by and refuge of Chironomidae larvae, mainly under conductions of faster water flow and higher precipitation.

  3. Studies on Colombian cryptogams XX. A transect analysis of the bryophyte vegetation along an altitudinal gradient on the Sierra Nevada de Santa Marta, Colombia

    NARCIS (Netherlands)

    Reenen, van G.B.A.; Gradstein, S.R.

    1983-01-01

    Along an altitudinal transect on the northern slope of the Sierra Nevada de Santa Marta, Colombia, 500-4100 m, five altitudinal bryophyte zones are distinguished – four forest zones and one páramo zone – based on ecosystem relevé analysis concerning species presence, substrate preference and

  4. Direct and Indirect Drivers of Moss Community Structure, Function, and Associated Microfauna Across a Successional Gradient

    Science.gov (United States)

    Micael Jonsson; Paul Kardol; Michael J. Gundale; Sheel Bansal; Marie-Charlotte Nilsson; Daniel B. Metcalfe; David A. Wardle

    2015-01-01

    Relative to vascular plants, little is known about what factors control bryophyte communities or how they respond to successional and environmental changes. Bryophytes are abundant in boreal forests, thus changes in moss community composition and functional traits (for example, moisture and nutrient content; rates of photosynthesis and respiration) may have important...

  5. Vascular Epiphytes

    International Nuclear Information System (INIS)

    Chaparro, Angela; Barrera Torres, Eduardo

    1993-01-01

    The author makes reference to the epiphytes, as vegetable species that don't develop his complete vital cycle in the soil, but rather they live on other plants, without obtaining nutritious of them as the orchids, they are constituted partly important in the composition floristic of the Colombian forest; he also mentions that the over-exploitation of some arboreal species and the destruction or alteration of his habitats, they have placed to the epiphytes in extinction danger

  6. Evaluating rapid ground sampling and scaling estimated plant cover using UAV imagery up to Landsat for mapping arctic vegetation

    Science.gov (United States)

    Nelson, P.; Paradis, D. P.

    2017-12-01

    The small stature and spectral diversity of arctic plant taxa presents challenges in mapping arctic vegetation. Mapping vegetation at the appropriate scale is needed to visualize effects of disturbance, directional vegetation change or mapping of specific plant groups for other applications (eg. habitat mapping). Fine spatial grain of remotely sensed data (ca. 10 cm pixels) is often necessary to resolve patches of many arctic plant groups, such as bryophytes and lichens. These groups are also spectrally different from mineral, litter and vascular plants. We sought to explore method to generate high-resolution spatial and spectral data to explore better mapping methods for arctic vegetation. We sampled ground vegetation at seven sites north or west of tree-line in Alaska, four north of Fairbanks and three northwest of Bethel, respectively. At each site, we estimated cover of plant functional types in 1m2 quadrats spaced approximately every 10 m along a 100 m long transect. Each quadrat was also scanned using a field spectroradiometer (PSR+ Spectral Evolution, 400-2500 nm range) and photographed from multiple perspectives. We then flew our small UAV with a RGB camera over the transect and at least 50 m on either side collecting on imagery of the plot, which were used to generate a image mosaic and digital surface model of the plot. We compare plant functional group cover ocular estimated in situ to post-hoc estimation, either automated or using a human observer, using the quadrat photos. We also compare interpolated lichen cover from UAV scenes to estimated lichen cover using a statistical models using Landsat data, with focus on lichens. Light and yellow lichens are discernable in the UAV imagery but certain lichens, especially dark colored lichens or those with spectral signatures similar to graminoid litter, present challenges. Future efforts will focus on integrating UAV-upscaled ground cover estimates to hyperspectral sensors (eg. AVIRIS ng) for better combined

  7. Variabilidade no conteúdo calórico de plantas vasculares em dois reservatórios do Estado do Paraná - DOI: 10.4025/actascibiolsci.v26i2.1611 Variability in the caloric content of vascular plants in two Paraná State reservoirs - DOI: 10.4025/actascibiolsci.v26i2.1611

    Directory of Open Access Journals (Sweden)

    Danielle Peretti

    2004-04-01

    Full Text Available Com o intuito de quantificar o conteúdo calórico das plantas vasculares de dois reservatórios do Estado do Paraná, bem como sua variabilidade espacial e entre grupos ecológicos, foram realizadas amostragens em dezembro de 2002, nas zonas fluvial, de transição e lacustre dos reservatórios Mourão e Rosana. Foram amostradas, ao acaso, folhas maduras de plantas aquáticas e da vegetação ripária de diferentes indivíduos (n = 5, pertencentes à mesma espécie. Para obtenção do conteúdo calórico, em cal.g-1 de peso seco, as amostras foram maceradas em moinho de bola e submetidas à combustão em bomba calorimétrica PARR. Os dados foram submetidos a uma ANOVA modelo nulo, utilizando-se o programa EcoSim versão 7.44. Foi constatado que as plantas vasculares analisadas apresentaram ampla variabilidade calórica. Além disso, foram significativas as variabilidades espacial e entre os grupos ecológicos, não sendo recomendável o uso de um único valor calórico para estes produtores primários em modelos de fluxo de energia, sendo necessária, uma inspeção preliminar da amplitude e dos fatores que são determinantes de tal variaçãoThe present research aimed to quantify the vascular plants caloric content in two reservoirs in Paraná, as well as the spatial and ecological group variabilities. The sampling was done in December 2002, in the fluvial, transition and lacustrine zones in Rosana and Mourão reservoirs. Aquatic macrophytes and riparian vegetation mature leaves, from different individuals (n=5, belonging to the same species, were randomly sampled. In order to obtain the caloric content, in cal.g-1 dry weight, the samples were pulverized in a ball mill and subjected to combustion in a PARR calorimetric bomb. The data were treated with a null model ANOVA (EcoSim 7.44 program. A wide caloric variability was verified in the vascular plants analysed. Besides, the spatial and ecological group variabilities were significant, so it

  8. Bioprinting for vascular and vascularized tissue biofabrication.

    Science.gov (United States)

    Datta, Pallab; Ayan, Bugra; Ozbolat, Ibrahim T

    2017-03-15

    Bioprinting is a promising technology to fabricate design-specific tissue constructs due to its ability to create complex, heterocellular structures with anatomical precision. Bioprinting enables the deposition of various biologics including growth factors, cells, genes, neo-tissues and extra-cellular matrix-like hydrogels. Benefits of bioprinting have started to make a mark in the fields of tissue engineering, regenerative medicine and pharmaceutics. Specifically, in the field of tissue engineering, the creation of vascularized tissue constructs has remained a principal challenge till date. However, given the myriad advantages over other biofabrication methods, it becomes organic to expect that bioprinting can provide a viable solution for the vascularization problem, and facilitate the clinical translation of tissue engineered constructs. This article provides a comprehensive account of bioprinting of vascular and vascularized tissue constructs. The review is structured as introducing the scope of bioprinting in tissue engineering applications, key vascular anatomical features and then a thorough coverage of 3D bioprinting using extrusion-, droplet- and laser-based bioprinting for fabrication of vascular tissue constructs. The review then provides the reader with the use of bioprinting for obtaining thick vascularized tissues using sacrificial bioink materials. Current challenges are discussed, a comparative evaluation of different bioprinting modalities is presented and future prospects are provided to the reader. Biofabrication of living tissues and organs at the clinically-relevant volumes vitally depends on the integration of vascular network. Despite the great progress in traditional biofabrication approaches, building perfusable hierarchical vascular network is a major challenge. Bioprinting is an emerging technology to fabricate design-specific tissue constructs due to its ability to create complex, heterocellular structures with anatomical precision

  9. Insertional mutagenesis in the vascular wilt pathogen Verticillium dahliae

    NARCIS (Netherlands)

    Santhanam, P.

    2014-01-01

    Vascular wilt diseases caused by soil-borne pathogens are among the most

    devastating plant diseases worldwide. The ascomycete fungus Verticillium dahliae

    causes vascular wilt diseases in hundreds of dicotyledonous plant species, including

    important crops such as eggplant,

  10. Synthesis of UDP-apiose in Bacteria: The marine phototroph Geminicoccus roseus and the plant pathogen Xanthomonas pisi.

    Directory of Open Access Journals (Sweden)

    James Amor Smith

    Full Text Available The branched-chain sugar apiose was widely assumed to be synthesized only by plant species. In plants, apiose-containing polysaccharides are found in vascularized plant cell walls as the pectic polymers rhamnogalacturonan II and apiogalacturonan. Apiosylated secondary metabolites are also common in many plant species including ancestral avascular bryophytes and green algae. Apiosyl-residues have not been documented in bacteria. In a screen for new bacterial glycan structures, we detected small amounts of apiose in methanolic extracts of the aerobic phototroph Geminicoccus roseus and the pathogenic soil-dwelling bacteria Xanthomonas pisi. Apiose was also present in the cell pellet of X. pisi. Examination of these bacterial genomes uncovered genes with relatively low protein homology to plant UDP-apiose/UDP-xylose synthase (UAS. Phylogenetic analysis revealed that these bacterial UAS-like homologs belong in a clade distinct to UAS and separated from other nucleotide sugar biosynthetic enzymes. Recombinant expression of three bacterial UAS-like proteins demonstrates that they actively convert UDP-glucuronic acid to UDP-apiose and UDP-xylose. Both UDP-apiose and UDP-xylose were detectable in cell cultures of G. roseus and X. pisi. We could not, however, definitively identify the apiosides made by these bacteria, but the detection of apiosides coupled with the in vivo transcription of bUAS and production of UDP-apiose clearly demonstrate that these microbes have evolved the ability to incorporate apiose into glycans during their lifecycles. While this is the first report to describe enzymes for the formation of activated apiose in bacteria, the advantage of synthesizing apiose-containing glycans in bacteria remains unknown. The characteristics of bUAS and its products are discussed.

  11. Studies of Physcomitrella patens reveal that ethylene-mediated submergence responses arose relatively early in land-plant evolution

    KAUST Repository

    Yasumura, Yuki

    2012-10-18

    Colonization of the land by multicellular green plants was a fundamental step in the evolution of life on earth. Land plants evolved from fresh-water aquatic algae, and the transition to a terrestrial environment required the acquisition of developmental plasticity appropriate to the conditions of water availability, ranging from drought to flood. Here we show that extant bryophytes exhibit submergence-induced developmental plasticity, suggesting that submergence responses evolved relatively early in the evolution of land plants. We also show that a major component of the bryophyte submergence response is controlled by the phytohormone ethylene, using a perception mechanism that has subsequently been conserved throughout the evolution of land plants. Thus a plant environmental response mechanism with major ecological and agricultural importance probably had its origins in the very earliest stages of the colonization of the land. © 2012 Blackwell Publishing Ltd.

  12. Comparative crytpgam ecology: A review of bryophyte and lichen traits that drive biogeochemistry.

    NARCIS (Netherlands)

    Cornelissen, J.H.C.; Lang, S.I.; Soudzilovskaia, N.A.; During, H.J.

    2007-01-01

    • Background: Recent decades have seen a major surge in the study of interspecific variation in functional traits in comparative plant ecology, as a tool to understanding and predicting ecosystem functions and their responses to environmental change. However, this research has been biased almost

  13. Effects of SO/sub 2/ pollution on plant life

    Energy Technology Data Exchange (ETDEWEB)

    Mansfield, T A; Bull, J N

    1972-01-01

    SO/sub 2/ is the most intensively studied of the air pollutants that affect plants. Some lower plants (e.g. lichens and bryophytes) are so sensitive that they cannot tolerate exposure to concentrations above 0.011 ppM. Higher plants appear to be more resistant but recent research shows that other pollutants may inter-act with SO/sub 2/ to increase their susceptibility. The physiological and biochemical effects of SO/sub 2/ are discussed, and the economic implications are briefly considered. 15 references.

  14. Methylobacteria isolated from bryophytes and the 2-fold description of the same microbial species

    OpenAIRE

    Schauer, S.; Kutschera, U.

    2013-01-01

    On the surface of healthy land plants (embryophytes), numerous non-pathogenic bacteria have been discovered and described. Among these epiphytic microbes, pink-pigmented facultative methylotrophic microbes of the genus Methylobacterium are of special significance, because these microorganisms consume methanol emitted via the stomatal pores and secrete growth-promoting phytohormones. Methylobacterium funariae, Schauer and Kutschera 2011, a species isolated in our lab from the common cord moss,...

  15. Bryophytes and Organic layers Control Uptake of Airborne Nitrogen in Low-N Environments

    Science.gov (United States)

    Bähring, Alexandra; Fichtner, Andreas; Friedrich, Uta; von Oheimb, Goddert; Härdtle, Werner

    2017-01-01

    The effects of atmospheric nitrogen (N) deposition on ecosystem functioning largely depend on the retention of N in different ecosystem compartments, but accumulation and partitioning processes have rarely been quantified in long-term field experiments. In the present study we analysed for the first time decadal-scale flows and allocation patterns of N in a heathland ecosystem that has been subject to airborne N inputs over decades. Using a long-term 15N tracer experiment, we quantified N retention and flows to and between ecosystem compartments (above-ground/below-ground vascular biomass, moss layer, soil horizons, leachate). After 9 years, about 60% of the added 15N-tracer remained in the N cycle of the ecosystem. The moss layer proved to be a crucial link between incoming N and its allocation to different ecosystem compartments (in terms of a short-term capture, but long-term release function). However, about 50% of the 15N captured and released by the moss layer was not compensated for by a corresponding increase in recovery rates in any other compartment, probably due to denitrification losses from the moss layer in the case of water saturation after rain events. The O-horizon proved to be the most important long-term sink for added 15N, as reflected by an increase in recovery rates from 18 to 40% within 8 years. Less than 2.1% of 15N were recovered in the podzol-B-horizon, suggesting that only negligible amounts of N were withdrawn from the N cycle of the ecosystem. Moreover, 15N recovery was low in the dwarf shrub above-ground biomass (account for cumulative effects of N additions into ecosystems. PMID:29375589

  16. Contrasting growth responses of dominant peatland plants to warming and vegetation composition.

    Science.gov (United States)

    Walker, Tom N; Ward, Susan E; Ostle, Nicholas J; Bardgett, Richard D

    2015-05-01

    There is growing recognition that changes in vegetation composition can strongly influence peatland carbon cycling, with potential feedbacks to future climate. Nevertheless, despite accelerated climate and vegetation change in this ecosystem, the growth responses of peatland plant species to combined warming and vegetation change are unknown. Here, we used a field warming and vegetation removal experiment to test the hypothesis that dominant species from the three plant functional types present (dwarf-shrubs: Calluna vulgaris; graminoids: Eriophorum vaginatum; bryophytes: Sphagnum capillifolium) contrast in their growth responses to warming and the presence or absence of other plant functional types. Warming was accomplished using open top chambers, which raised air temperature by approximately 0.35 °C, and we measured air and soil microclimate as potential mechanisms through which both experimental factors could influence growth. We found that only Calluna growth increased with experimental warming (by 20%), whereas the presence of dwarf-shrubs and bryophytes increased growth of Sphagnum (46%) and Eriophorum (20%), respectively. Sphagnum growth was also negatively related to soil temperature, which was lower when dwarf-shrubs were present. Dwarf-shrubs may therefore promote Sphagnum growth by cooling the peat surface. Conversely, the effect of bryophyte presence on Eriophorum growth was not related to any change in microclimate, suggesting other factors play a role. In conclusion, our findings reveal contrasting abiotic and biotic controls over dominant peatland plant growth, suggesting that community composition and carbon cycling could be modified by simultaneous climate and vegetation change.

  17. Bryophytes and Organic layers Control Uptake of Airborne Nitrogen in Low-N Environments

    Directory of Open Access Journals (Sweden)

    Alexandra Bähring

    2017-12-01

    Full Text Available The effects of atmospheric nitrogen (N deposition on ecosystem functioning largely depend on the retention of N in different ecosystem compartments, but accumulation and partitioning processes have rarely been quantified in long-term field experiments. In the present study we analysed for the first time decadal-scale flows and allocation patterns of N in a heathland ecosystem that has been subject to airborne N inputs over decades. Using a long-term 15N tracer experiment, we quantified N retention and flows to and between ecosystem compartments (above-ground/below-ground vascular biomass, moss layer, soil horizons, leachate. After 9 years, about 60% of the added 15N-tracer remained in the N cycle of the ecosystem. The moss layer proved to be a crucial link between incoming N and its allocation to different ecosystem compartments (in terms of a short-term capture, but long-term release function. However, about 50% of the 15N captured and released by the moss layer was not compensated for by a corresponding increase in recovery rates in any other compartment, probably due to denitrification losses from the moss layer in the case of water saturation after rain events. The O-horizon proved to be the most important long-term sink for added 15N, as reflected by an increase in recovery rates from 18 to 40% within 8 years. Less than 2.1% of 15N were recovered in the podzol-B-horizon, suggesting that only negligible amounts of N were withdrawn from the N cycle of the ecosystem. Moreover, 15N recovery was low in the dwarf shrub above-ground biomass (<3.9% after 9 years and in the leachate (about 0.03% within 1 year, indicating still conservative N cycles of the ecosystem, even after decades of N inputs beyond critical load thresholds. The continuous accumulation of reactive forms of airborne N suggests that critical load-estimates need to account for cumulative effects of N additions into ecosystems.

  18. Dominance hierarchies, diversity and species richness of vascular plants in an alpine meadow: contrasting short and medium term responses to simulated global change

    Directory of Open Access Journals (Sweden)

    Juha M. Alatalo

    2014-05-01

    Full Text Available We studied the impact of simulated global change on a high alpine meadow plant community. Specifically, we examined whether short-term (5 years responses are good predictors for medium-term (7 years changes in the system by applying a factorial warming and nutrient manipulation to 20 plots in Latnjajaure, subarctic Sweden. Seven years of experimental warming and nutrient enhancement caused dramatic shifts in dominance hierarchies in response to the nutrient and the combined warming and nutrient enhancement treatments. Dominance hierarchies in the meadow moved from a community being dominated by cushion plants, deciduous, and evergreen shrubs to a community being dominated by grasses, sedges, and forbs. Short-term responses were shown to be inconsistent in their ability to predict medium-term responses for most functional groups, however, grasses showed a consistent and very substantial increase in response to nutrient addition over the seven years. The non-linear responses over time point out the importance of longer-term studies with repeated measurements to be able to better predict future changes. Forecasted changes to temperature and nutrient availability have implications for trophic interactions, and may ultimately influence the access to and palatability of the forage for grazers. Depending on what anthropogenic change will be most pronounced in the future (increase in nutrient deposits, warming, or a combination of them both, different shifts in community dominance hierarchies may occur. Generally, this study supports the productivity–diversity relationship found across arctic habitats, with community diversity peaking in mid-productivity systems and degrading as nutrient availability increases further. This is likely due the increasing competition in plant–plant interactions and the shifting dominance structure with grasses taking over the experimental plots, suggesting that global change could have high costs to biodiversity in the

  19. Plant-Associated Methylobacteria as Co-Evolved Phytosymbionts: A Hypothesis

    OpenAIRE

    Kutschera, Ulrich

    2007-01-01

    Due to their wall-associated pectin metabolism, growing plant cells emit significant amounts of the one-carbon alcohol methanol. Pink-pigmented microbes of the genus Methylobacterium that colonize the surfaces of leaves (epiphytes) are capable of growth on this volatile C1-compound as sole source of carbon and energy. In this article the results of experiments with germ-free (gnotobiotic) sporophytes of angiosperms (sunflower, maize) and gametophytes of bryophytes (a moss and two liverwort sp...

  20. Convergent evolution of vascular optimization in kelp (Laminariales).

    Science.gov (United States)

    Drobnitch, Sarah Tepler; Jensen, Kaare H; Prentice, Paige; Pittermann, Jarmila

    2015-10-07

    Terrestrial plants and mammals, although separated by a great evolutionary distance, have each arrived at a highly conserved body plan in which universal allometric scaling relationships govern the anatomy of vascular networks and key functional metabolic traits. The universality of allometric scaling suggests that these phyla have each evolved an 'optimal' transport strategy that has been overwhelmingly adopted by extant species. To truly evaluate the dominance and universality of vascular optimization, however, it is critical to examine other, lesser-known, vascularized phyla. The brown algae (Phaeophyceae) are one such group--as distantly related to plants as mammals, they have convergently evolved a plant-like body plan and a specialized phloem-like transport network. To evaluate possible scaling and optimization in the kelp vascular system, we developed a model of optimized transport anatomy and tested it with measurements of the giant kelp, Macrocystis pyrifera, which is among the largest and most successful of macroalgae. We also evaluated three classical allometric relationships pertaining to plant vascular tissues with a diverse sampling of kelp species. Macrocystis pyrifera displays strong scaling relationships between all tested vascular parameters and agrees with our model; other species within the Laminariales display weak or inconsistent vascular allometries. The lack of universal scaling in the kelps and the presence of optimized transport anatomy in M. pyrifera raises important questions about the evolution of optimization and the possible competitive advantage conferred by optimized vascular systems to multicellular phyla. © 2015 The Author(s).

  1. Esau's Plant anatomy: meristems, cells, and tissues of the plant body : their structure, function, and development

    National Research Council Canada - National Science Library

    Evert, Ray Franklin; Esau, Katherine; Eichhorn, Susan E

    2006-01-01

    ... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . The Body of a Vascular Plant Is Composed of Three Tissue Systems . . . . . . . . . . . . . . . . . . . . . Structurally Stem, Leaf, and Root Differ Primarily...

  2. Vascular grading of angiogenesis

    DEFF Research Database (Denmark)

    Hansen, S; Grabau, D A; Sørensen, Flemming Brandt

    2000-01-01

    The study aimed to evaluate the prognostic value of angiogenesis by vascular grading of primary breast tumours, and to evaluate the prognostic impact of adding the vascular grade to the Nottingham Prognostic Index (NPI). The investigation included 836 patients. The median follow-up time was 11...... years and 4 months. The microvessels were immunohistochemically stained by antibodies against CD34. Angiogenesis was graded semiquantitatively by subjective scoring into three groups according to the expected number of microvessels in the most vascular tumour area. The vascular grading between observers...... for 24% of the patients, who had a shift in prognostic group, as compared to NPI, and implied a better prognostic dissemination. We concluded that the angiogenesis determined by vascular grading has independent prognostic value of clinical relevance for patients with breast cancer....

  3. Vascular grading of angiogenesis

    DEFF Research Database (Denmark)

    Hansen, S; Grabau, D A; Sørensen, Flemming Brandt

    2000-01-01

    The study aimed to evaluate the prognostic value of angiogenesis by vascular grading of primary breast tumours, and to evaluate the prognostic impact of adding the vascular grade to the Nottingham Prognostic Index (NPI). The investigation included 836 patients. The median follow-up time was 11...... years and 4 months. The microvessels were immunohistochemically stained by antibodies against CD34. Angiogenesis was graded semiquantitatively by subjective scoring into three groups according to the expected number of microvessels in the most vascular tumour area. The vascular grading between observers...... impact for 24% of the patients, who had a shift in prognostic group, as compared to NPI, and implied a better prognostic dissemination. We concluded that the angiogenesis determined by vascular grading has independent prognostic value of clinical relevance for patients with breast cancer....

  4. North Carolina Seagrass Submersed Rooted Vasculars 1990 Geoform

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A GIS data set of polygon data interpreted from aerial photography taken by NOAA/NOS Photogrammetry Branch depicting areas of Aquatic Beds of Rooted Vascular Plants...

  5. North Carolina Seagrass Submersed Rooted Vasculars 1990 Biotic

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A GIS data set of polygon data interpreted from aerial photography taken by NOAA/NOS Photogrammetry Branch depicting areas of Aquatic Beds of Rooted Vascular Plants...

  6. North Carolina Seagrass Submersed Rooted Vasculars 1990 Substrate

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A GIS data set of polygon data interpreted from aerial photography taken by NOAA/NOS Photogrammetry Branch depicting areas of Aquatic Beds of Rooted Vascular Plants...

  7. Preliminary results of studies on the distribution of invasive alien vascular plant species occurring in semi-natural and natural habitats in NW Poland

    Directory of Open Access Journals (Sweden)

    Popiela Agnieszka

    2015-03-01

    Full Text Available In Western Pomerania, as in other areas of Europe, alien species play an increasingly important role. In particular, invasive plants tend to spread rapidly and in large numbers which may reduce diversity of native species, leading to the phenomenon of “trivialisation of flora”, and transform ecosystems. The list of invasive species (32 taxa includes alien species occurring throughout Western Pomerania, and penetrating natural or semi-natural habitats. The second group consists of potentially invasive species (23 taxa, i.e. those distributed across the area under study and tending to increase the number of their localities in semi-natural and natural habitats, taxa invasive only locally, as well as species with missing data, which does not currently allow including them into the first group. Invasive weeds, as well as some epecophytes and archaeophytes occurring only on anthropogenic sites and tending to spread, were not taken into account. Among hemiagriophytes, the most common and troublesome ones are: Conyza canadensis, Erigeron annuus, Lolium multiflorum, Lupinus polyphyllus, Solidago canadensis, S. gigantea. Among holoagriophytes, i.e. the taxa which received the highest naturalisation status, very expansive species, successful in land colonisation, like Acer negundo, Bidens frondosa, B. connata, Clematis vitalba, Elodea canadensis, Epilobium ciliatum, Heracleum sosnowskyi, Impatiens glandulifera, I. parviflora, Padus serotina, Quercus rubra and Robinia pseudoacacia, should be given particular attention. Among the invasive and potentially invasive species, most taxa penetrate plant communities of the Artemisietea and Molinio-Arrhenatheretea class, followed by Querco-Fagetea, Vaccinio-Piceetea, Stellarietea mediae, Salicetea purpurae and Koelerio-Corynophoretea. The number of invasive species is twice as high when compared to the situation of these species in Poland; on the contrary, the number of species inhabiting anthropogenic, semi

  8. High potential for weathering and climate effects of non-vascular vegetation in the Late Ordovician

    Science.gov (United States)

    Porada, Philipp; Lenton, Tim; Pohl, Alexandre; Weber, Bettina; Mander, Luke; Donnadieu, Yannick; Beer, Christian; Pöschl, Ulrich; Kleidon, Axel

    2017-04-01

    Early non-vascular vegetation in the Late Ordovician may have strongly increased chemical weathering rates of surface rocks at the global scale. This could have led to a drawdown of atmospheric CO2 and, consequently, a decrease in global temperature and an interval of glaciations. Under current climatic conditions, usually field or laboratory experiments are used to quantify enhancement of chemical weathering rates by non-vascular vegetation. However, these experiments are constrained to a small spatial scale and a limited number of species. This complicates the extrapolation to the global scale, even more so for the geological past, where physiological properties of non-vascular vegetation may have differed from current species. Here we present a spatially explicit modelling approach to simulate large-scale chemical weathering by non-vascular vegetation in the Late Ordovician. For this purpose, we use a process-based model of lichens and bryophytes, since these organisms are probably the closest living analogue to Late Ordovician vegetation. The model explicitly represents multiple physiological strategies, which enables the simulated vegetation to adapt to Ordovician climatic conditions. We estimate productivity of Ordovician vegetation with the model, and relate it to chemical weathering by assuming that the organisms dissolve rocks to extract phosphorus for the production of new biomass. Thereby we account for limits on weathering due to reduced supply of unweathered rock material in shallow regions, as well as decreased transport capacity of runoff for dissolved weathered material in dry areas. We simulate a potential global weathering flux of 2.8 km3 (rock) per year, which we define as volume of primary minerals affected by chemical transformation. Our estimate is around 3 times larger than today's global chemical weathering flux. Furthermore, chemical weathering rates simulated by our model are highly sensitive to atmospheric CO2 concentration, which implies

  9. Vascular Access in Children

    International Nuclear Information System (INIS)

    Krishnamurthy, Ganesh; Keller, Marc S.

    2011-01-01

    Establishment of stable vascular access is one of the essential and most challenging procedures in a pediatric hospital. Many clinical specialties provide vascular service in a pediatric hospital. At the top of the “expert procedural pyramid” is the pediatric interventional radiologist, who is best suited and trained to deliver this service. Growing awareness regarding the safety and high success rate of vascular access using image guidance has led to increased demand from clinicians to provide around-the-clock vascular access service by pediatric interventional radiologists. Hence, the success of a vascular access program, with the pediatric interventional radiologist as the key provider, is challenging, and a coordinated multidisciplinary team effort is essential for success. However, there are few dedicated pediatric interventional radiologists across the globe, and also only a couple of training programs exist for pediatric interventions. This article gives an overview of the technical aspects of pediatric vascular access and provides useful tips for obtaining vascular access in children safely and successfully using image guidance.

  10. Pediatric vascular access

    International Nuclear Information System (INIS)

    Donaldson, James S.

    2006-01-01

    Pediatric interventional radiologists are ideally suited to provide vascular access services to children because of inherent safety advantages and higher success from using image-guided techniques. The performance of vascular access procedures has become routine at many adult interventional radiology practices, but this service is not as widely developed at pediatric institutions. Although interventional radiologists at some children's hospitals offer full-service vascular access, there is little or none at others. Developing and maintaining a pediatric vascular access service is a challenge. Interventionalists skilled in performing such procedures are limited at pediatric institutions, and institutional support from clerical staff, nursing staff, and technologists might not be sufficiently available to fulfill the needs of such a service. There must also be a strong commitment by all members of the team to support such a demanding service. There is a slippery slope of expected services that becomes steeper and steeper as the vascular access service grows. This review is intended primarily as general education for pediatric radiologists learning vascular access techniques. Additionally, the pediatric or adult interventional radiologist seeking to expand services might find helpful tips. The article also provides education for the diagnostic radiologist who routinely interprets radiographs containing vascular access devices. (orig.)

  11. Vascular malformations in pediatrics

    International Nuclear Information System (INIS)

    Reith, W.; Shamdeen, M.G.

    2003-01-01

    Vascular malformations are the cause of nearly all non-traumatic intracranial hemorrhage in children beyond the neonatal stage. Therefore, any child presenting with spontaneous intracranial hemorrhage should be evaluated for child abuse and for vascular malformations. Intracerebral malformations of the cerebral vasculature include vein of Galen malformations, arteriovenous malformation (AVM), cavernomas, dural arteriovenous fistulas, venous anomalies (DVA), and capillary teleangiectasies. Although a few familial vascular malformation have been reported, the majority are sporadic. Clinical symptoms, diagnostic and therapeutic options are discussed. (orig.) [de

  12. A case study of intragenomic ITS variation in bryophytes: Assessment of gene flow and role of polyploidy in the origin of European taxa of the Tortula muralis (Musci: Pottiaceae) complex

    Czech Academy of Sciences Publication Activity Database

    Košnar, J.; Herbstová, Miroslava; Kolář, Filip; Koutecký, P.; Kučera, J.

    2012-01-01

    Roč. 61, č. 4 (2012), s. 709-720 ISSN 0040-0262 Institutional research plan: CEZ:AV0Z50510513; CEZ:AV0Z60050516 Institutional support: RVO:60077344 ; RVO:67985939 Keywords : bryophytes * gene flow * intragenomic variation * Tortula Subject RIV: EF - Botanics; EF - Botanics (BU-J) Impact factor: 2.782, year: 2012

  13. Uterine Vascular Lesions

    Science.gov (United States)

    Vijayakumar, Abhishek; Srinivas, Amruthashree; Chandrashekar, Babitha Moogali; Vijayakumar, Avinash

    2013-01-01

    Vascular lesions of the uterus are rare; most reported in the literature are arteriovenous malformations (AVMs). Uterine AVMs can be congenital or acquired. In recent years, there has been an increasing number of reports of acquired vascular lesions of the uterus following pregnancy, abortion, cesarean delivery, and curettage. It can be seen from these reports that there is confusion concerning the terminology of uterine vascular lesions. There is also a lack of diagnostic criteria and management guidelines, which has led to an increased number of unnecessary invasive procedures (eg, angiography, uterine artery embolization, hysterectomy for abnormal vaginal bleeding). This article familiarizes readers with various vascular lesions of the uterus and their management. PMID:24340126

  14. Magnetic resonance vascular imaging

    International Nuclear Information System (INIS)

    Axel, L

    1989-01-01

    The basis principles of MRI are reviewed in order to understand how blood flow effects arise in conventional imaging. Then some of the ways these effects have ben used in MRI techniques specifically designed for vascular imaging, are considered. (author)

  15. Mercury in bryophytes (moss)

    Energy Technology Data Exchange (ETDEWEB)

    Yeaple, D S

    1972-01-28

    Recent reports in the literature, concerning the ability of certain mosses and lichens to concentrate heavy metals, have led to an investigation of the potential application of mosses as indicators of the transport of mercury through the atmosphere. A number of moss samples were collected to provide information regarding the level of mercury in moss around several types of populated areas. The results reported are from moss collected within an 80 mile radius of Boston, Massachusetts, along the Maine coast, near the tops of Mount Katahdin in Maine and Mount Washington in New Hampshire, and from Walden, New York, a small town located about 60 miles north of New York City. The data are admittedly limited, but provide sufficient insight into the usefulness of moss as an indicator to warrant the pursuit of a more detailed investigation. 6 references, 1 table.

  16. Ecology of the Nevada Test Site. I. Geographic and ecologic distributions of the vascular flora (annotated checklist)

    Energy Technology Data Exchange (ETDEWEB)

    Beatley, J C

    1965-04-01

    A checklist of vascular plants of the Nevada Test Site is presented for use in studies of plant ecology. Data on the occurrence and distribution of plant species are included. Collections were made from both undisturbed and disturbed sites.

  17. Release of volatile mercury from vascular plants

    Science.gov (United States)

    Siegel, S. M.; Puerner, N. J.; Speitel, T. W.

    1974-01-01

    Volatile, organic solvent soluble mercury has been found in leaves and seeds of several angiosperms. Leaves of garlic vine, avocado, and haole-koa release mercury in volatile form rapidly at room temperature. In garlic vine, the most active release is temperature dependent, but does not parallel the vapor-pressure temperature relationship for mercury. Mercury can be trapped in nitric-perchloric acid digestion fluid, or n-hexane, but is lost from the hexane unless the acid mixture is present. Seeds of haole-koa also contain extractable mercury but volatility declines in the series n-hexane (90%), methanol (50%), water (10%). This suggests that reduced volatility may accompany solvolysis in the more polar media.

  18. Energy from vascular plant wastewater treatment systems

    Energy Technology Data Exchange (ETDEWEB)

    Wolverton, B.C.; McDonald, R.C.

    1981-04-01

    Water hyacinth (Eichhornia crassipes) duckweed (Spirodela sp. and Lemna sp.), water pennywort (Hydrocotyle ranunculoides), and kudzu (Pueraria lobata) were anaerobically fermented using an anaerobic filter technique that reduced the total digestion time from 90 d to an average of 23 d and produced 0.14 to 0.22 m/sup 3/ CH/sub 4//kg (dry weight) (2.3 to 3.6 ft/sup 3//lb) from mature filters for the 3 aquatic species. Kudzu required an average digestion time of 33 d and produced an average of 0.21 m/sup 3/ CH/sub 4//kg (dry weight) (3.4 ft/sup 3//lb). The anaerobic filter provided a large surface area for the anaerobic bacteria to establish and maintain an optimal balance of facultative, acid-forming, and methane-producing bacteria. Consequently the efficiency of the process was greatly improved over prior batch fermentations.

  19. Vascular Morphodynamics During Secondary Growth.

    Science.gov (United States)

    de Reuille, Pierre Barbier; Ragni, Laura

    2017-01-01

    Quantification of vascular morphodynamics during secondary growth has been hampered by the scale of the process. Even in the tiny model plant Arabidopsis thaliana, the xylem can include more than 2000 cells in a single cross section, rendering manual counting impractical. Moreover, due to its deep location, xylem is an inaccessible tissue, limiting live imaging. A novel method to visualize and measure secondary growth progression has been proposed: "the Quantitative Histology" approach. This method is based on a detailed anatomical atlas, and image segmentation coupled with machine learning to automatically extract cell shapes and identify cell type. Here we present a new version of this approach, with a user-friendly interface implemented in the open source software LithoGraphX.

  20. Overview of vascular disease

    International Nuclear Information System (INIS)

    Bisset, G.S. III

    1998-01-01

    Vascular disease in the pediatric population is a poorly understood process which is often underestimated in its incidence. The common beginnings of such ubiquitous diseases as atherosclerosis manifest themselves at a cellular level shortly after birth. Other common systemic disorders, including congestive heart failure and sepsis, are also intricately associated with dysfunctional vasculature. Progress in the understanding of normal and pathophysiologic processes within the vascular system begins with the 'control center' - the endothelial cell. The purpose of this review is to consolidate a body of knowledge on the processes that occur at the cellular level within the blood vessel wall, and to simplify the understanding of how imbalances in these physiologic parameters result in vascular disease. (orig.)

  1. Convergent evolution of vascular optimization in kelp (Laminariales)

    DEFF Research Database (Denmark)

    Drobnitch, Sarah Tepler; Jensen, Kaare Hartvig; Prentice, Paige

    2015-01-01

    Terrestrial plants and mammals, although separated by a great evolutionary distance, have each arrived at a highly conserved body plan in which universal allometric scaling relationships govern the anatomy of vascular networks and key functional metabolic traits. The universality of allometric...... (Phaeophyceae) are one such group—as distantly related to plants as mammals, they have convergently evolved a plant-like body plan and a specialized phloem-like transport network. To evaluate possible scaling and optimization in the kelp vascular system, we developed a model of optimized transport anatomy...... and tested it with measurements of the giant kelp, Macrocystis pyrifera, which is among the largest and most successful of macroalgae. We also evaluated three classical allometric relationships pertaining to plant vascular tissues with a diverse sampling of kelp species. Macrocystis pyrifera displays strong...

  2. Renal posttransplant's vascular complications

    Directory of Open Access Journals (Sweden)

    Bašić Dragoslav

    2003-01-01

    Full Text Available INTRODUCTION Despite high graft and recipient survival figures worldwide today, a variety of technical complications can threaten the transplant in the postoperative period. Vascular complications are commonly related to technical problems in establishing vascular continuity or to damage that occurs during donor nephrectomy or preservation [13]. AIM The aim of the presenting study is to evaluate counts and rates of vascular complications after renal transplantation and to compare the outcome by donor type. MATERIAL AND METHODS A total of 463 kidneys (319 from living related donor LD and 144 from cadaveric donor - CD were transplanted during the period between June 1975 and December 1998 at the Urology & Nephrology Institute of Clinical Centre of Serbia in Belgrade. Average recipients' age was 33.7 years (15-54 in LD group and 39.8 (19-62 in CD group. Retrospectively, we analyzed medical records of all recipients. Statistical analysis is estimated using Hi-squared test and Fischer's test of exact probability. RESULTS Major vascular complications including vascular anastomosis thrombosis, internal iliac artery stenosis, internal iliac artery rupture obliterant vasculitis and external iliac vein rupture were analyzed. In 25 recipients (5.4% some of major vascular complications were detected. Among these cases, 22 of them were from CD group vs. three from LD group. Relative rate of these complications was higher in CD group vs. LD group (p<0.0001. Among these complications dominant one was vascular anastomosis thrombosis which occurred in 18 recipients (17 from CD vs. one from LD. Of these recipients 16 from CD lost the graft, while the rest of two (one from each group had lethal outcome. DISCUSSION Thrombosis of renal allograft vascular anastomosis site is the most severe complication following renal transplantation. In the literature, renal allograft thrombosis is reported with different incidence rates, from 0.5-4% [14, 15, 16]. Data from the

  3. SIFlore, a dataset of geographical distribution of vascular plants covering five centuries of knowledge in France: Results of a collaborative project coordinated by the Federation of the National Botanical Conservatories.

    Science.gov (United States)

    Just, Anaïs; Gourvil, Johan; Millet, Jérôme; Boullet, Vincent; Milon, Thomas; Mandon, Isabelle; Dutrève, Bruno

    2015-01-01

    More than 20 years ago, the French Muséum National d'Histoire Naturelle (MNHN, Secretariat of the Fauna and Flora) published the first part of an atlas of the flora of France at a 20km spatial resolution, accounting for 645 taxa (Dupont 1990). Since then, at the national level, there has not been any work on this scale relating to flora distribution, despite the obvious need for a better understanding. In 2011, in response to this need, the Federation des Conservatoires Botaniques Nationaux (FCBN, http://www.fcbn.fr) launched an ambitious collaborative project involving eleven national botanical conservatories of France. The project aims to establish a formal procedure and standardized system for data hosting, aggregation and publication for four areas: flora, fungi, vegetation and habitats. In 2014, the first phase of the project led to the development of the national flora dataset: SIFlore. As it includes about 21 million records of flora occurrences, this is currently the most comprehensive dataset on the distribution of vascular plants (Tracheophyta) in the French territory. SIFlore contains information for about 15'454 plant taxa occurrences (indigenous and alien taxa) in metropolitan France and Reunion Island, from 1545 until 2014. The data records were originally collated from inventories, checklists, literature and herbarium records. SIFlore was developed by assembling flora datasets from the regional to the national level. At the regional level, source records are managed by the national botanical conservatories that are responsible for flora data collection and validation. In order to present our results, a geoportal was developed by the Fédération des conservatoires botaniques nationaux that allows the SIFlore dataset to be publically viewed. This portal is available at: http://siflore.fcbn.fr. As the FCBN belongs to the Information System for Nature and Landscapes' (SINP), a governmental program, the dataset is also accessible through the websites of

  4. Major Vascular Neurocognitive Disorder: A Reappraisal to Vascular Dementia

    Directory of Open Access Journals (Sweden)

    Emre Kumral

    2017-03-01

    Full Text Available Major vascular neurocognitive disorder (NCD is the second leading form of dementia after Alzheimer’s disease, accounting for 17-20% of all dementias. Vascular NCD is a progressive disease caused by reduced cerebral blood flow related to multiple large volume or lacunar infarcts that induce a sudden onset and stepwise decline in cognitive abilities. Despite its prevalence and clinical importance, there is still controversy in the terminology of vascular NCD. Only after the release of Diagnostic and Statistical Manual of Mental Disorders-5 (DSM-5 (2013 did the American Psychiatric Association define vascular dementia as “major vascular NCD”. This review includes an overview of risk factors, pathophysiology, types, diagnostic and clinical features of major vascular NCD, and current treatment options of vascular NCD regarding to DSM-5 criteria

  5. Electronic plants

    Science.gov (United States)

    Stavrinidou, Eleni; Gabrielsson, Roger; Gomez, Eliot; Crispin, Xavier; Nilsson, Ove; Simon, Daniel T.; Berggren, Magnus

    2015-01-01

    The roots, stems, leaves, and vascular circuitry of higher plants are responsible for conveying the chemical signals that regulate growth and functions. From a certain perspective, these features are analogous to the contacts, interconnections, devices, and wires of discrete and integrated electronic circuits. Although many attempts have been made to augment plant function with electroactive materials, plants’ “circuitry” has never been directly merged with electronics. We report analog and digital organic electronic circuits and devices manufactured in living plants. The four key components of a circuit have been achieved using the xylem, leaves, veins, and signals of the plant as the template and integral part of the circuit elements and functions. With integrated and distributed electronics in plants, one can envisage a range of applications including precision recording and regulation of physiology, energy harvesting from photosynthesis, and alternatives to genetic modification for plant optimization. PMID:26702448

  6. Vascular cognitive impairment

    Directory of Open Access Journals (Sweden)

    N.V. Vakhnina

    2014-01-01

    Full Text Available Vascular pathology of the brain is the second most common cause of cognitive impairment after Alzheimer's disease. The article describes the modern concepts of etiology, pathogenetic mechanisms, clinical features and approaches to diagnosis and therapy of vascular cognitive impairment (VCI. Cerebrovascular accident, chronic cerebral circulatory insufficiency and their combination, sometimes in combination with a concomitant neurodegenerative process, are shown to be the major types of brain lesions leading to VCI. The clinical presentation of VCI is characterized by the neuropsychological status dominated by impairment of the executive frontal functions (planning, control, attention in combination with focal neurological symptoms. The diagnosis is based on comparing of the revealed neuropsychological and neurological features with neuroimaging data. Neurometabolic, acetylcholinergic, glutamatergic, and other vasoactive drugs and non-pharmacological methods are widely used to treat VCI. 

  7. Vascular Surgery and Robotics

    Directory of Open Access Journals (Sweden)

    Indrani Sen

    2016-01-01

    Full Text Available The application of robotics to Vascular surgery has not progressed as rapidly as of endovascular technology, but this is changing with the amalgamation of these two fields. The advent of Endovascular robotics is an exciting field which overcomes many of the limitations of endovascular therapy like vessel tortuosity and operator fatigue. This has much clinical appeal for the surgeon and hold significant promise of better patient outcomes. As with most newer technological advances, it is still limited by cost and availability. However, this field has seen some rapid progress in the last decade with the technology moving into the clinical realm. This review details the development of robotics, applications, outcomes, advantages, disadvantages and current advances focussing on Vascular and Endovascular robotics

  8. Accumulation of uranium by aquatic plants in field conditions: Prospects for phytoremediation

    International Nuclear Information System (INIS)

    Favas, Paulo J.C.; Pratas, João; Varun, Mayank; D'Souza, Rohan; Paul, Manoj S.

    2014-01-01

    A study was undertaken to determine Uranium concentrations in water and aquatic plants in the uraniferous region of Beiras, Central Portugal. Samples were collected from running water (n = 200) at places where aquatic species were observed. Plant samples were collected from 28 species of submerged, free-floating and rooted emergent plants including 2 bryophytes and 1 pteridophyte. Uranium concentrations in surface waters ranged from 0.23 to 1217 μg L −1 . The aquatic plant species studied, including several previously untested species, exhibited the ability to accumulate U in concentrations many times that of the ambient water. In general submerged plants exhibited higher U content followed by rooted emergent and free floating species. The highest U concentrations were observed in the bryophyte Fontinalis antipyretica (up to 4979 mg kg −1 ) followed by Callitriche stagnalis (1963 mg kg −1 ), Callitriche hamulata (379 mg kg −1 ), Ranunculus peltatus subsp. saniculifolius (243 mg kg −1 ), Callitriche lusitanica (218 mg kg −1 ), and Ranunculus trichophyllus (65.8 mg kg −1 ). In two out of three rooted emergent species U seemed to be preferentially partitioned in rhizome/roots with highest rhizome U content recorded in Typha latifolia (380 mg kg −1 ). Among the free-floating species, the highest U content (42.5 mg kg −1 ) was seen in Lemna minor. The bryophyte F. antipyretica and Callitrichaceae members seem to be promising candidates for the development of phytofiltration methodologies based on U accumulation, abundance and biomass production. - Highlights: • Exploration of U contamination extent in uraniferous province of Central Portugal • A group of previously untested species with the ability to accumulate U was assessed • U accumulation patterns in the species indicate their potential in bioindication and phytoremediation of U-contaminated water

  9. Accumulation of uranium by aquatic plants in field conditions: Prospects for phytoremediation

    Energy Technology Data Exchange (ETDEWEB)

    Favas, Paulo J.C., E-mail: pjcf@utad.pt [School of Life Sciences and the Environment, University of Trás-os-Montes e Alto Douro, 5001-801 Vila Real (Portugal); IMAR-CMA Marine and Environmental Research Centre, Faculty of Sciences and Technology, University of Coimbra, 3001-401 Coimbra (Portugal); Pratas, João [Department of Earth Sciences, Faculty of Sciences and Technology, University of Coimbra, 3001-401 Coimbra (Portugal); IMAR-CMA Marine and Environmental Research Centre, Faculty of Sciences and Technology, University of Coimbra, 3001-401 Coimbra (Portugal); Varun, Mayank; D' Souza, Rohan; Paul, Manoj S. [Department of Botany, St. John' s College, Agra 282 002 (India)

    2014-02-01

    A study was undertaken to determine Uranium concentrations in water and aquatic plants in the uraniferous region of Beiras, Central Portugal. Samples were collected from running water (n = 200) at places where aquatic species were observed. Plant samples were collected from 28 species of submerged, free-floating and rooted emergent plants including 2 bryophytes and 1 pteridophyte. Uranium concentrations in surface waters ranged from 0.23 to 1217 μg L{sup −1}. The aquatic plant species studied, including several previously untested species, exhibited the ability to accumulate U in concentrations many times that of the ambient water. In general submerged plants exhibited higher U content followed by rooted emergent and free floating species. The highest U concentrations were observed in the bryophyte Fontinalis antipyretica (up to 4979 mg kg{sup −1}) followed by Callitriche stagnalis (1963 mg kg{sup −1}), Callitriche hamulata (379 mg kg{sup −1}), Ranunculus peltatus subsp. saniculifolius (243 mg kg{sup −1}), Callitriche lusitanica (218 mg kg{sup −1}), and Ranunculus trichophyllus (65.8 mg kg{sup −1}). In two out of three rooted emergent species U seemed to be preferentially partitioned in rhizome/roots with highest rhizome U content recorded in Typha latifolia (380 mg kg{sup −1}). Among the free-floating species, the highest U content (42.5 mg kg{sup −1}) was seen in Lemna minor. The bryophyte F. antipyretica and Callitrichaceae members seem to be promising candidates for the development of phytofiltration methodologies based on U accumulation, abundance and biomass production. - Highlights: • Exploration of U contamination extent in uraniferous province of Central Portugal • A group of previously untested species with the ability to accumulate U was assessed • U accumulation patterns in the species indicate their potential in bioindication and phytoremediation of U-contaminated water.

  10. Vascular lesions following radiation

    International Nuclear Information System (INIS)

    Fajardo, L.F.; Berthrong, M.

    1988-01-01

    The special radiation sensitivity of the vascular system is mainly linked to that of endothelial cells, which are perhaps the most radiation-vulnerable elements of mesenchymal tissues. Within the vascular tree, radiation injures most often capillaries, sinusoids, and small arteries, in that order. Lesions of veins are observed less often, but in certain tissues the veins are regularly damaged (e.g., intestine) or are the most affected structures (i.e., liver). Large arteries do suffer the least; however, when significant damage does occur in an elastic artery (e.g., thrombosis or rupture), it tends to be clinically significant and even fatal. Although not always demonstrable in human tissues, radiation vasculopathy generally is dose and time dependent. Like other radiation-induced lesions, the morphology in the vessels is not specific, but it is characteristic enough to be often recognizable. Vascular injury, especially by therapeutic radiation is not just a morphologic marker. It is a mediator of tissue damage; perhaps the most consistent pathogenetic mechanism in delayed radiation injury

  11. Vascular lumen formation.

    Science.gov (United States)

    Lammert, Eckhard; Axnick, Jennifer

    2012-04-01

    The vascular system developed early in evolution. It is required in large multicellular organisms for the transport of nutrients, oxygen, and waste products to and from tissues. The vascular system is composed of hollow tubes, which have a high level of complexity in vertebrates. Vasculogenesis describes the de novo formation of blood vessels, e.g., aorta formation in vertebrate embryogenesis. In contrast, angiogenesis is the formation of blood vessels from preexisting ones, e.g., sprouting of intersomitic blood vessels from the aorta. Importantly, the lumen of all blood vessels in vertebrates is lined and formed by endothelial cells. In both vasculogenesis and angiogenesis, lumen formation takes place in a cord of endothelial cells. It involves a complex molecular mechanism composed of endothelial cell repulsion at the cell-cell contacts within the endothelial cell cords, junctional rearrangement, and endothelial cell shape change. As the vascular system also participates in the course of many diseases, such as cancer, stroke, and myocardial infarction, it is important to understand and make use of the molecular mechanisms of blood vessel formation to better understand and manipulate the pathomechanisms involved.

  12. Pulmonary vascular imaging

    International Nuclear Information System (INIS)

    Fedullo, P.F.; Shure, D.

    1987-01-01

    A wide range of pulmonary vascular imaging techniques are available for the diagnostic evaluation of patients with suspected pulmonary vascular disease. The characteristics of any ideal technique would include high sensitivity and specificity, safety, simplicity, and sequential applicability. To date, no single technique meets these ideal characteristics. Conventional pulmonary angiography remains the gold standard for the diagnosis of acute thromboembolic disease despite the introduction of newer techniques such as digital subtraction angiography and magnetic resonance imaging. Improved noninvasive lower extremity venous testing methods, particularly impedance plethysmography, and ventilation-perfusion scanning can play significant roles in the noninvasive diagnosis of acute pulmonary emboli when properly applied. Ventilation-perfusion scanning may also be useful as a screening test to differentiate possible primary pulmonary hypertension from chronic thromboembolic pulmonary hypertension. And, finally, angioscopy may be a useful adjunctive technique to detect chronic thromboembolic disease and determine operability. Optimal clinical decision-making, however, will continue to require the proper interpretation of adjunctive information obtained from the less-invasive techniques, applied with an understanding of the natural history of the various forms of pulmonary vascular disease and with a knowledge of the capabilities and shortcomings of the individual techniques

  13. Bryophyte Communities from Abandoned Mercury Mine in Eastern Guizhou Province%废弃汞矿山苔藓植物群落生态研究

    Institute of Scientific and Technical Information of China (English)

    潘莎; 张朝晖

    2011-01-01

    对贵州省铜仁市云场坪镇废弃汞矿山的苔藓植物群落进行了研究,通过野外全面调查和实验室仔细鉴定,发现废弃汞矿山苔藓植物群落的种类组成有13科52属62种(苔类植物2科2属2种,藓类植物11科50属60种).应用双向指示种分析法(TWINSPAN)和除趋势对应分析(DCA)分析其分布格局表明,该区12个样点分为2个类型组,组1为废石、废渣样地,组2为废洞样地,说明废洞与废石、废渣生境差异性较大,忿函、废渣生境较相似;北地扭口藓群落(Barbula fallax Com.)、阔叶小石藓群落(Weisia planifolia Corn.)、尖叶扭口藓群落(Barbula conystricta Com.)、拟丛净口藓群落(Gymnostomum anoectangioides Com.)、硬叶净口藓群落(Gymnostomum subrigidulumCom.)为该矿区废石、废渣上的优势群落,其生物量为55.20 -448.20 g·m-,,饱和吸水量为260.80-3 599.40 g-m-2,说明在矿区这种干旱且保水能力弱的环境区域,苔藓植物群落以其特有的生态功能在矿区生态环境治理中具有十分重要的作用.%The bryophyte communities were investigated in abandoned mercury mine of Yunchangping town,Guizhou province. Based on the extensive investigation and identification of the bryophyte specimens, 62 taxa in 52 genera of 13 families were found (2 species in 2 genera of 2 families are Hepaticae, 60 taxa in 50 genera of 11 families are Musci). Two-way Indicator Species Analysis (TWINSPAN) and Detrended Correspondence Analysis (DCA) were used to analyze their distribution patterns. The results showed that 12 sampling plots could be classified into two groups. Group 1 contained waste rock sampling plots and waste solid sampling plots, group 2 contained abandoned mercury mine caves, which indicated the habitats of abandoned mercury mine caves are different from waste rock and waste solid, the habitats of waste rock and waste solid are similar. The dominant communities are Barbula fallax Com. , Weisia planifolia Com. , Barbula

  14. Briófitas do Parque Nacional da Restinga de Jurubatiba, RJ, Brasil Bryophytes of Restinga de Jurubatiba National Park, Rio de Janeiro State, Brazil

    Directory of Open Access Journals (Sweden)

    Caio Amitrano de Alencar Imbassahy

    2009-06-01

    Full Text Available Este trabalho representa uma síntese do conhecimento florístico de briófitas do Parque Nacional da Restinga de Jurubatiba, com resultados de campo, material de herbário e publicações. Foram registrados 61 táxons de briófitas, pertencentes a 15 famílias e 33 gêneros. Para cada táxon foram analisados a distribuição geográfica, o tipo de substrato e a forma de vida. A família predominante foi Lejeuneaceae (25 espécies, seguida de Jubulaceae (sete, Calymperaceae (quatro e Sphagnaceae (quatro. Entre as espécies, predominaram as de distribuição Neotropical (35%. Com relação ao substrato preferencial, a maior parte dos táxons é corticícola. A forma de vida predominante foi o tapete, seguido pelo tufo e a trama. O Parque possui brioflora bastante representativa no que diz respeito à vegetação de restinga, com 45% dos táxons de briófitas conhecidas para as restingas no Brasil e 82% das conhecidas para as restingas do estado do Rio de Janeiro. É apresentada uma chave para identificação das espécies.We present a synthesis of the bryophyte flora in Restinga de Jurubatiba National Park, based on field work, herbaria material and bibliography. Sixty one taxa were recorded, in 15 families and 33 genera. For each taxa, we analyze geographic distribution, substrata and life form. The most species-rich family was Lejeuneaceae (25 species, followed by Jubulaceae (seven, Calymperaceae (four and Sphagnaceae (four. Most taxa have a Neotropical (35% distribution, and most taxa prefer the corticicolous substrate. Mat was the most common life form. The bryoflora of this National Park is an important reservoir of bryophyte diversity in the restingas, with 45% of the taxa known from the sandy coastal plains of Brazil and 82% known from the this habitat in Rio de Janeiro state. A key to identification of the species is given.

  15. Briófitas da caatinga 1: Estação Experimental do IPA, Caruaru - PE Bryophyte of caatinga 1: experimental station at the IPA, Caruaru - PE

    Directory of Open Access Journals (Sweden)

    Kátia Cavalcanti Pôrto

    1994-07-01

    Full Text Available Foi realizado o levantamento da brioflora de uma caatinga arbórea pertencente a Estação Experimental da Empresa Pernambucana de Pesquisas Agropecuárias (IPA, situada no município de Caruaru (8º08'00"-8º10'00"S, 36º02'00"-36º 10'00"W, Pernambuco. A área estudada compreende 20ha, tem altitude aproximada de 550m e médias anuais de precipitação e temperatura de 671 mm e 23ºC, respectivamente. As coletas foram realizadas durante as estações de estiagem (out-nov/1990 e chuvosa (mai-jun/1991, tendo sido investigados os seguintes substratos: solo, rocha, caules vivos e em decomposição. Registraram-se 16 espécies de briófitas, sendo 14 Bryopsida e 2 Hepaticopsida. Bryaceae e Fissidentaceae foram as famílias de maior representatividade específica na área. A maioria das coletas indicou a predominância de espécies terrícolas e saxícolas, seguindo-se as corticícolas e as epíxilas. O trabalho contém informações sobre distribuição geográfica e aspectos ecológicos das espécies.A floristic survey of bryophyte was carried out in a experimental station at the Empresa Pernambucana de Pesquisa Agropecuária at Caruaru (Lat. 8º08'00"-8º10'00"S; Long. 36º02'00"-36º10,00"W, Pernambuco State. This area has 20ha, an altitude of 550m, an annual rainfall average of 671mm and 23ºC of temperature. The bryophytes were collected during the dry season (oct-nov/1990 and the rain season (may-jui/1991, on the following substrata: soil, rocks, living and dead trunks. There were identified 16 species, 14 Bryopsida and 2 Hepaticopsida. Bryaceae and Fissidentaceae were the most rich families in number of species. In the studied area, the terricolous species were predominant followed by saxicolous, corticolous and the species of decaying wood. Geographical distribution and ecological informations about the species were included.

  16. Evolution of plant cell wall: Arabinogalactan-proteins from three moss genera show structural differences compared to seed plants.

    Science.gov (United States)

    Bartels, Desirée; Baumann, Alexander; Maeder, Malte; Geske, Thomas; Heise, Esther Marie; von Schwartzenberg, Klaus; Classen, Birgit

    2017-05-01

    Arabinogalactan-proteins (AGPs) are important proteoglycans of plant cell walls. They seem to be present in most, if not all seed plants, but their occurrence and structure in bryophytes is widely unknown and actually the focus of AGP research. With regard to evolution of plant cell wall, we isolated AGPs from the three mosses Sphagnum sp., Physcomitrella patens and Polytrichastrum formosum. The moss AGPs show structural characteristics common for AGPs of seed plants, but also unique features, especially 3-O-methyl-rhamnose (trivial name acofriose) as terminal monosaccharide not found in arabinogalactan-proteins of angiosperms and 1,2,3-linked galactose as branching point never found in arabinogalactan-proteins before. Copyright © 2017 Elsevier Ltd. All rights reserved.

  17. Evolution of allosteric regulation in chorismate mutases from early plants

    Energy Technology Data Exchange (ETDEWEB)

    Kroll, Kourtney; Holland, Cynthia K.; Starks, Courtney M.; Jez, Joseph M.

    2017-09-28

    Plants, fungi, and bacteria synthesize the aromatic amino acids: l-phenylalanine, l-tyrosine, and l-tryptophan. Chorismate mutase catalyzes the branch point reaction of phenylalanine and tyrosine biosynthesis to generate prephenate. In Arabidopsis thaliana, there are two plastid-localized chorismate mutases that are allosterically regulated (AtCM1 and AtCM3) and one cytosolic isoform (AtCM2) that is unregulated. Previous analysis of plant chorismate mutases suggested that the enzymes from early plants (i.e. bryophytes/moss, lycophytes, and basal angiosperms) formed a clade distinct from the isoforms found in flowering plants; however, no biochemical information on these enzymes is available. To understand the evolution of allosteric regulation in plant chorismate mutases, we analyzed a basal lineage of plant enzymes homologous to AtCM1 based on sequence similarity. The chorismate mutases from the moss/bryophyte Physcomitrella patens (PpCM1 and PpCM2), the lycophyte Selaginella moellendorffii (SmCM), and the basal angiosperm Amborella trichopoda (AmtCM1 and AmtCM2) were characterized biochemically. Tryptophan was a positive effector for each of the five enzymes examined. Histidine was a weak positive effector for PpCM1 and AmtCM1. Neither tyrosine nor phenylalanine altered the activity of SmCM; however, tyrosine was a negative regulator of the other four enzymes. Phenylalanine down-regulates both moss enzymes and AmtCM2. The 2.0 Å X-ray crystal structure of PpCM1 in complex with the tryptophan identified the allosteric effector site and reveals structural differences between the R- (more active) and T-state (less active) forms of plant chorismate mutases. Molecular insight into the basal plant chorismate mutases guides our understanding of the evolution of allosteric regulation in these enzymes.

  18. Vascular remodeling and mineralocorticoids.

    Science.gov (United States)

    Weber, K T; Sun, Y; Campbell, S E; Slight, S H; Ganjam, V K

    1995-01-01

    Circulating mineralocorticoid hormones are so named because of their important homeostatic properties that regulate salt and water balance via their action on epithelial cells. A broader range of functions in nonclassic target cellular sites has been proposed for these steroids and includes their contribution to wound healing following injury. A chronic, inappropriate (relative to intravascular volume and dietary sodium intake) elevation of these circulating hormones evokes a wound healing response in the absence of tissue injury--a wound healing response gone awry. The adverse remodeling of vascularized tissues seen in association with chronic mineralocorticoid excess is the focus of this review.

  19. Bryophyte and pteridophyte spores and other palynomorphs in quaternary marine sediments from Campos Basin, southeastern Brazil: Core BU-91-GL-05

    Directory of Open Access Journals (Sweden)

    Aline Gonçalves de Freitas

    2015-06-01

    Full Text Available This paper presents morphological descriptions and ecological data of cryptogam spores and other non-pollen palynomorphs from Quaternary sediments of Campos Basin, Rio de Janeiro, SE Brazil. The ages were derived from biostratigraphy of planktonic foraminifers and two radiocarbon dates, and suggest that sediment deposition started in the last 140,000 years BP. Thirty different types of palynomorphs were identified, described, and photographed: two bryophyte spores (sensu lato; 21 pteridophyte spores; four freshwater microalgae; onePseudoschizaea; and two microfungi. Some of the identified spores (Sphagnum, Blechnum, Cyatheaceae, Dennstaedtiaceae, Lycopodiella, Microgramma, Polypodium, Acrostichum, Pityrogramma, and Lygodium are related to the modern flora found on the northern coast of Rio de Janeiro State, at the Restinga of Jurubatiba, from vegetation types such as shrub swamp/coastal swamp formation, seasonally flooded forest, Clusia and Ericaceae woods, and disturbed vegetation. The freshwater microalgae and the microfungi are also presently recorded from the coastal lagoons of this region. The high spore concentration in slope sediments reflects the intense terrigenous influx, caused by a relative low sealevel during glacial stages. Palynological analysis suggests the presence of taxa from flooded forests and humid areas in the coastal plain during glacial and interglacial stages of the Late Pleistocene.

  20. Interventional vascular radiology

    International Nuclear Information System (INIS)

    Yune, H.Y.

    1984-01-01

    The papers published during this past year in the area of interventional vascular radiology presented some useful modifications and further experiences both in the area of thromboembolic therapy and in dilation and thrombolysis, but no new techniques. As an introductory subject, an excellent monograph reviewing the current spectrum of pharmacoangiography was presented in Radiographics. Although the presented material is primarily in diagnostic application of various pharmacologic agents used today to facilitate demonstration of certain diagnostic criteria of various disease processes, both vasodilatory and vasoconstrictive reaction to these agents are widely used in various therapeutic vascular procedures. This monograph should be reviewed by every angiographer whether or not he or she performs interventional procedures, and it would be very convenient to have this table available in the angiography suite. In a related subject, Bookstein and co-workers have written an excellent review concerning pharmacologic manipulations of various blood coagulative parameters during angiography. Understanding the proper method of manipulation of the bloodclotting factors during angiography, and especially during interventional angiography, is extremely important. Particularly, the method of manipulating the coagulation with the use of heparin and protamine and modification of the platelet activity by using aspirin and dipyridamole are succinctly reviewed. The systemic and selective thrombolytic activities of streptokianse are also discussed

  1. Vascular dysfunction in preeclampsia.

    Science.gov (United States)

    Brennan, Lesley J; Morton, Jude S; Davidge, Sandra T

    2014-01-01

    Preeclampsia is a complex disorder which affects an estimated 5% of all pregnancies worldwide. It is diagnosed by hypertension in the presence of proteinuria after the 20th week of pregnancy and is a prominent cause of maternal morbidity and mortality. As delivery is currently the only known treatment, preeclampsia is also a leading cause of preterm delivery. Preeclampsia is associated with maternal vascular dysfunction, leading to serious cardiovascular risk both during and following pregnancy. Endothelial dysfunction, resulting in increased peripheral resistance, is an integral part of the maternal syndrome. While the cause of preeclampsia remains unknown, placental ischemia resulting from aberrant placentation is a fundamental characteristic of the disorder. Poor placentation is believed to stimulate the release of a number of factors including pro- and antiangiogenic factors and inflammatory activators into the maternal systemic circulation. These factors are critical mediators of vascular function and impact the endothelium in distinctive ways, including enhanced endothelial oxidative stress. The mechanisms of action and the consequences on the maternal vasculature will be discussed in this review. © 2013 John Wiley & Sons Ltd.

  2. Vascular Remodeling in Experimental Hypertension

    Directory of Open Access Journals (Sweden)

    Norma R. Risler

    2005-01-01

    Full Text Available The basic hemodynamic abnormality in hypertension is an increased peripheral resistance that is due mainly to a decreased vascular lumen derived from structural changes in the small arteries wall, named (as a whole vascular remodeling. The vascular wall is an active, flexible, and integrated organ made up of cellular (endothelial cells, smooth muscle cells, adventitia cells, and fibroblasts and noncellular (extracellular matrix components, which in a dynamic way change shape or number, or reorganize in response to physiological and pathological stimuli, maintaining the integrity of the vessel wall in physiological conditions or participating in the vascular changes in cardiovascular diseases such as hypertension. Research focused on new signaling pathways and molecules that can participate in the mechanisms of vascular remodeling has provided evidence showing that vascular structure is not only affected by blood pressure, but also by mechanisms that are independent of the increased pressure. This review will provide an overview of the evidence, explaining some of the pathophysiologic mechanisms participating in the development of the vascular remodeling, in experimental models of hypertension, with special reference to the findings in spontaneously hypertensive rats as a model of essential hypertension, and in fructose-fed rats as a model of secondary hypertension, in the context of the metabolic syndrome. The understanding of the mechanisms producing the vascular alterations will allow the development of novel pharmacological tools for vascular protection in hypertensive disease.

  3. Additive Manufacturing of Vascular Grafts and Vascularized Tissue Constructs.

    Science.gov (United States)

    Elomaa, Laura; Yang, Yunzhi Peter

    2017-10-01

    There is a great need for engineered vascular grafts among patients with cardiovascular diseases who are in need of bypass therapy and lack autologous healthy blood vessels. In addition, because of the severe worldwide shortage of organ donors, there is an increasing need for engineered vascularized tissue constructs as an alternative to organ transplants. Additive manufacturing (AM) offers great advantages and flexibility of fabrication of cell-laden, multimaterial, and anatomically shaped vascular grafts and vascularized tissue constructs. Various inkjet-, extrusion-, and photocrosslinking-based AM techniques have been applied to the fabrication of both self-standing vascular grafts and porous, vascularized tissue constructs. This review discusses the state-of-the-art research on the use of AM for vascular applications and the key criteria for biomaterials in the AM of both acellular and cellular constructs. We envision that new smart printing materials that can adapt to their environment and encourage rapid endothelialization and remodeling will be the key factor in the future for the successful AM of personalized and dynamic vascular tissue applications.

  4. Cardiac and vascular malformations

    International Nuclear Information System (INIS)

    Ley, S.; Ley-Zaporozhan, J.

    2015-01-01

    Malformations of the heart and great vessels show a high degree of variation. There are numerous variants and defects with only few clinical manifestations and are only detected by chance, such as a persistent left superior vena cava or a partial anomalous pulmonary venous connection. Other cardiovascular malformations are manifested directly after birth and need prompt mostly surgical interventions. At this point in time echocardiography is the diagnostic modality of choice for morphological and functional characterization of malformations. Additional imaging using computed tomography (CT) or magnetic resonance imaging (MRI) is only required in a minority of cases. If so, the small anatomical structures, the physiological tachycardia and tachypnea are a challenge for imaging modalities and strategies. This review article presents the most frequent vascular, cardiac and complex cardiovascular malformations independent of the first line diagnostic imaging modality. (orig.) [de

  5. Macroecology, paleoecology, and ecological integrity of terrestrial species and communities of the interior Columbia basin and northern portions of the Klamath and Great Basins.

    Science.gov (United States)

    Bruce G. Marcot; L.K. Croft; J.F. Lehmkuhl; R.H. Naney; C.G. Niwa; W.R. Owen; R.E. Sandquist

    1998-01-01

    This report present information on biogeography and broad-scale ecology (macroecology) of selected fungi, lichens, bryophytes, vascular plants, invertebrates, and vertebrates of the interior Columbia River basin and adjacent areas. Rareplants include many endemics associated with local conditions. Potential plant and invertebrate bioindicators are identified. Species...

  6. CIRSE Vascular Closure Device Registry

    NARCIS (Netherlands)

    Reekers, Jim A.; Müller-Hülsbeck, Stefan; Libicher, Martin; Atar, Eli; Trentmann, Jens; Goffette, Pierre; Borggrefe, Jan; Zeleňák, Kamil; Hooijboer, Pieter; Belli, Anna-Maria

    2011-01-01

    Vascular closure devices are routinely used after many vascular interventional radiology procedures. However, there have been no major multicenter studies to assess the safety and effectiveness of the routine use of closure devices in interventional radiology. The CIRSE registry of closure devices

  7. Dynamic adaption of vascular morphology

    DEFF Research Database (Denmark)

    Okkels, Fridolin; Jacobsen, Jens Christian Brings

    2012-01-01

    The structure of vascular networks adapts continuously to meet changes in demand of the surrounding tissue. Most of the known vascular adaptation mechanisms are based on local reactions to local stimuli such as pressure and flow, which in turn reflects influence from the surrounding tissue. Here ...

  8. Diagnostic criteria for vascular dementia

    NARCIS (Netherlands)

    Scheltens, P.; Hijdra, A. H.

    1998-01-01

    The term vascular dementia implies the presence of a clinical syndrome (dementia) caused by, or at least assumed to be caused by, a specific disorder (cerebrovascular disease). In this review, the various sets of criteria used to define vascular dementia are outlined. The various sets of criteria

  9. The vascular secret of Klotho

    DEFF Research Database (Denmark)

    Lewin, Ewa; Olgaard, Klaus

    2015-01-01

    Klotho is an evolutionarily highly conserved protein related to longevity. Increasing evidence of a vascular protecting effect of the Klotho protein has emerged and might be important for future treatments of uremic vascular calcification. It is still disputed whether Klotho is locally expressed ...

  10. Social media in vascular surgery.

    Science.gov (United States)

    Indes, Jeffrey E; Gates, Lindsay; Mitchell, Erica L; Muhs, Bart E

    2013-04-01

    There has been a tremendous growth in the use of social media to expand the visibility of various specialties in medicine. The purpose of this paper is to describe the latest updates on some current applications of social media in the practice of vascular surgery as well as existing limitations of use. This investigation demonstrates that the use of social networking sites appears to have a positive impact on vascular practice, as is evident through the incorporation of this technology at the Cleveland Clinic and by the Society for Vascular Surgery into their approach to patient care and physician communication. Overall, integration of social networking technology has current and future potential to be used to promote goals, patient awareness, recruitment for clinical trials, and professionalism within the specialty of vascular surgery. Copyright © 2013 Society for Vascular Surgery. Published by Mosby, Inc. All rights reserved.

  11. New tasks for lowly plants

    Energy Technology Data Exchange (ETDEWEB)

    Gilbert, O L

    1970-05-01

    The occurrence and behavior of easily identified lichens and bryophytes can be used as an index of sulfur dioxide pollution, since SO/sub 2/ kills them. As these lower plants range from very sensitive to highly resistant, they can be arranged to form a scale from which levels of SO/sub 2/ can be estimated. Also, by mapping the distribution of selected species, the size and shape of an area affected by pollution can be determined. Ideally, these indicator species would be widespread, easy to recognize, and among them show a wide range of sensitivity so that the rate of fall off of pollution can be assessed. A table of SO/sub 2/ estimates correlated to plant incidence is given. Along with some examples of application of the principle. Pollution other than SO/sub 2/ have only barely detectable effects on lower plants, however, observations around aluminium smelters suggest that lichens are also useful indicators of fluorine pollution. 3 figures, 1 table.

  12. Perturbing phosphoinositide homeostasis oppositely affects vascular differentiation in Arabidopsis thaliana roots

    NARCIS (Netherlands)

    Gujas, Bojan; Cruz, Tiago M D; Kastanaki, Elizabeth; Vermeer, Joop E M; Munnik, Teun; Rodriguez-Villalon, Antia

    2017-01-01

    The plant vascular network consists of specialized phloem and xylem elements that undergo two distinct morphogenetic developmental programs to become transport-functional units. Whereas vacuolar rupture is a determinant step in protoxylem differentiation, protophloem elements never form a big

  13. Local adaptations in bryophytes revisited: the genetic structure of the calcium-tolerant peatmoss Sphagnum warnstorfii along geographic and pH gradients

    Science.gov (United States)

    Mikulášková, Eva; Hájek, Michal; Veleba, Adam; Johnson, Matthew G; Hájek, Tomáš; Shaw, Jonathan A

    2015-01-01

    Bryophytes dominate some ecosystems despite their extraordinary sensitivity to habitat quality. Nevertheless, some species behave differently across various regions. The existence of local adaptations is questioned by a high dispersal ability, which is thought to redistribute genetic variability among populations. Although Sphagnum warnstorfii is an important ecosystem engineer in fen peatlands, the causes of its rather wide niche along the pH/calcium gradient are poorly understood. Here, we studied the genetic variability of its global populations, with a detailed focus on the wide pH/calcium gradient in Central Europe. Principal coordinates analysis of 12 polymorphic microsatellite loci revealed a significant gradient coinciding with water pH, but independent of geography; even samples from the same fens were clearly separated along this gradient. However, most of the genetic variations remained unexplained, possibly because of the introgression from phylogenetically allied species. This explanation is supported by the small heterogeneous cluster of samples that appeared when populations morphologically transitional to S. subnites, S. rubellum, or S. russowii were included into the analysis. Alternatively, this unexplained variation might be attributed to a legacy of glacial refugia with recently dissolved ecological and biogeographic consequences. Isolation by distance appeared at the smallest scale only (up to 43 km). Negative spatial correlations occurred more frequently, mainly at long distances (up to 950 km), implying a genetic similarity among samples which are very distant geographically. Our results confirm the high dispersal ability of peatmosses, but simultaneously suggested that their ability to cope with a high pH/calcium level is at least partially determined genetically, perhaps via specific physiological mechanisms or a hummock-forming ability. PMID:25628880

  14. Vascular disease in cocaine addiction.

    Science.gov (United States)

    Bachi, Keren; Mani, Venkatesh; Jeyachandran, Devi; Fayad, Zahi A; Goldstein, Rita Z; Alia-Klein, Nelly

    2017-07-01

    Cocaine, a powerful vasoconstrictor, induces immune responses including cytokine elevations. Chronic cocaine use is associated with functional brain impairments potentially mediated by vascular pathology. Although the Crack-Cocaine epidemic has declined, its vascular consequences are increasingly becoming evident among individuals with cocaine use disorder of that period, now aging. Paradoxically, during the period when prevention efforts could make a difference, this population receives psychosocial treatment at best. We review major postmortem and in vitro studies documenting cocaine-induced vascular toxicity. PubMed and Academic Search Complete were used with relevant terms. Findings consist of the major mechanisms of cocaine-induced vasoconstriction, endothelial dysfunction, and accelerated atherosclerosis, emphasizing acute, chronic, and secondary effects of cocaine. The etiology underlying cocaine's acute and chronic vascular effects is multifactorial, spanning hypertension, impaired homeostasis and platelet function, thrombosis, thromboembolism, and alterations in blood flow. Early detection of vascular disease in cocaine addiction by multimodality imaging is discussed. Treatment may be similar to indications in patients with traditional risk-factors, with few exceptions such as enhanced supportive care and use of benzodiazepines and phentolamine for sedation, and avoiding β-blockers. Given the vascular toxicity cocaine induces, further compounded by smoking and alcohol comorbidity, and interacting with aging of the crack generation, there is a public health imperative to identify pre-symptomatic markers of vascular impairments in cocaine addiction and employ preventive treatment to reduce silent disease progression. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. [The future of vascular medicine].

    Science.gov (United States)

    Kroeger, K; Luther, B

    2014-10-01

    In the future vascular medicine will still have a great impact on health of people. It should be noted that the aging of the population does not lead to a dramatic increase in patient numbers, but will be associated with a changing spectrum of co-morbidities. In addition, vascular medical research has to include the intensive care special features of vascular patients, the involvement of vascular medicine in a holistic concept of fast-track surgery, a geriatric-oriented intensive monitoring and early geriatric rehabilitation. For the future acceptance of vascular medicine as a separate subject area under delimitation of cardiology and radiology is important. On the other hand, the subject is so complex and will become more complex in future specialisations that mixing of surgery and angiology is desirable, with the aim to preserve the vascular surgical knowledge and skills on par with the medical and interventional measures and further develop them. Only large, interdisciplinary guided vascular centres will be able to provide timely diagnosis and therapy, to deal with the growing multi-morbidity of the patient, to perform complex therapies even in an acute emergency and due to sufficient number of cases to present with well-trained and experienced teams. These requirements are mandatory to decrease patients' mortality step by step. Georg Thieme Verlag KG Stuttgart · New York.

  16. Contemporary vascular smartphone medical applications.

    Science.gov (United States)

    Carter, Thomas; O'Neill, Stephen; Johns, Neil; Brady, Richard R W

    2013-08-01

    Use of smartphones and medical mHealth applications (apps) within the clinical environment provides a potential means for delivering elements of vascular care. This article reviews the contemporary availability of apps specifically themed to major vascular diseases and the opportunities and concerns regarding their integration into practice. Smartphone apps relating to major vascular diseases were identified from the app stores for the 6 most popular smartphone platforms, including iPhone, Android, Blackberry, Nokia, Windows, and Samsung. Search terms included peripheral artery (arterial) disease, varicose veins, aortic aneurysm, carotid artery disease, amputation, ulcers, hyperhydrosis, thoracic outlet syndrome, vascular malformation, and lymphatic disorders. Forty-nine vascular-themed apps were identified. Sixteen (33%) were free of charge. Fifteen apps (31%) had customer satisfaction ratings, but only 3 (6%) had greater than 100. Only 13 apps (27%) had documented medical professional involvement in their design or content. The integration of apps into the delivery of care has the potential to benefit vascular health care workers and patients. However, high-quality apps designed by clinicians with vascular expertise are currently lacking and represent an area of concern in the mHealth market. Improvement in the quality and reliability of these apps will require the development of robust regulation. Copyright © 2013 Elsevier Inc. All rights reserved.

  17. Effect of Injecting Hydrogen Peroxide into Heavy Clay Loam Soil on Plant Water Status, NET CO2 Assimilation, Biomass, and Vascular Anatomy of Avocado Trees Efecto de la Inyección de Peróxido de Hidrógeno en Suelo Franco Arcilloso Pesado, sobre el Estado Hídrico, Asimilación Neta de CO2, Biomasa y Anatomía Vascular de Paltos

    Directory of Open Access Journals (Sweden)

    Pilar M Gil M

    2009-03-01

    Full Text Available In Chile, avocado (Persea americana Mill. orchards are often located in poorly drained, low-oxygen soils, situation which limits fruit production and quality. The objective of this study was to evaluate the effect of injecting soil with hydrogen peroxide (H2O2 as a source of molecular oxygen, on plant water status, net CO2 assimilation, biomass and anatomy of avocado trees set in clay loam soil with water content maintained at field capacity. Three-year-old ‘Hass’ avocado trees were planted outdoors in containers filled with heavy loam clay soil with moisture content sustained at field capacity. Plants were divided into two treatments, (a H2O2 injected into the soil through subsurface drip irrigation and (b soil with no H2O2 added (control. Stem and root vascular anatomical characteristics were determined for plants in each treatment in addition to physical soil characteristics, net CO2 assimilation (A, transpiration (T, stomatal conductance (gs, stem water potential (SWP, shoot and root biomass, water use efficiency (plant biomass per water applied [WUEb]. Injecting H2O2 into the soil significantly increased the biomass of the aerial portions of the plant and WUEb, but had no significant effect on measured A, T, gs, or SWP. Xylem vessel diameter and xylem/phloem ratio tended to be greater for trees in soil injected with H2O2 than for controls. The increased biomass of the aerial portions of plants in treated soil indicates that injecting H2O2 into heavy loam clay soils may be a useful management tool in poorly aerated soil.En Chile, los huertos de palto (Persea americana Mill. se ubican comúnmente en suelos pobremente drenados con bajo contenido de oxígeno, lo que limita producción y calidad de fruta. El objetivo de este estudio fue evaluar el efecto de la inyección de peróxido de hidrógeno (H2O2 al suelo como fuente de O2, sobre el estado hídrico, asimilación de CO2, biomasa y anatomía de paltos en suelo franco arcilloso con

  18. Constructal vascularized structures

    Science.gov (United States)

    Cetkin, Erdal

    2015-06-01

    Smart features such as self-healing and selfcooling require bathing the entire volume with a coolant or/and healing agent. Bathing the entire volume is an example of point to area (or volume) flows. Point to area flows cover all the distributing and collecting kinds of flows, i.e. inhaling and exhaling, mining, river deltas, energy distribution, distribution of products on the landscape and so on. The flow resistances of a point to area flow can be decreased by changing the design with the guidance of the constructal law, which is the law of the design evolution in time. In this paper, how the flow resistances (heat, fluid and stress) can be decreased by using the constructal law is shown with examples. First, the validity of two assumptions is surveyed: using temperature independent Hess-Murray rule and using constant diameter ducts where the duct discharges fluid along its edge. Then, point to area types of flows are explained by illustrating the results of two examples: fluid networks and heating an area. Last, how the structures should be vascularized for cooling and mechanical strength is documented. This paper shows that flow resistances can be decreased by morphing the shape freely without any restrictions or generic algorithms.

  19. Diabetes and Retinal Vascular Dysfunction

    Directory of Open Access Journals (Sweden)

    Eui Seok Shin

    2014-01-01

    Full Text Available Diabetes predominantly affects the microvascular circulation of the retina resulting in a range of structural changes unique to this tissue. These changes ultimately lead to altered permeability, hyperproliferation of endothelial cells and edema, and abnormal vascularization of the retina with resulting loss of vision. Enhanced production of inflammatory mediators and oxidative stress are primary insults with significant contribution to the pathogenesis of diabetic retinopathy (DR. We have determined the identity of the retinal vascular cells affected by hyperglycemia, and have delineated the cell autonomous impact of high glucose on function of these cells. We discuss some of the high glucose specific changes in retinal vascular cells and their contribution to retinal vascular dysfunction. This knowledge provides novel insight into the molecular and cellular defects contributing to the development and progression of diabetic retinopathy, and will aid in the development of innovative, as well as target specific therapeutic approaches for prevention and treatment of DR.

  20. Vascular graft infections with Mycoplasma

    DEFF Research Database (Denmark)

    Levi-Mazloum, Niels Donald; Skov Jensen, J; Prag, J

    1995-01-01

    laboratory techniques, the percentage of culture-negative yet grossly infected vascular grafts seems to be increasing and is not adequately explained by the prior use of antibiotics. We have recently reported the first case of aortic graft infection with Mycoplasma. We therefore suggest the hypothesis...... that the large number of culture-negative yet grossly infected vascular grafts may be due to Mycoplasma infection not detected with conventional laboratory technique....

  1. Limb vascular function in women

    DEFF Research Database (Denmark)

    Hellsten, Ylva; Gliemann, Lasse

    2018-01-01

    Throughout life, women are subjected to both acute fluctuations in sex hormones, associated with the menstrual cycle, and chronic changes following the onset of menopause. Female sex hormones, and in particular estrogen, strongly influence cardiovascular function such as the regulation of vascular...... studies. Physical activity should be recommended for women of all ages, but the most essential timing for maintenance of vascular health may be from menopause and onwards....

  2. Facial vascular malformations in children

    International Nuclear Information System (INIS)

    Brunelle, F.O.; Lallemand, D.; Chaumont, P.; Teillac, D.; Manach, Y.

    1988-01-01

    The authors present their experience with conventional and digital angiography of vascular malformations of the head and neck in children. 22 hemangioendotheliomas, 8 venous angiomas, and 3 arteriovenous fistula were studied. 22 patients were embolised. DSA offers many advantages during the diagnostic as well as during the therapeutic phase of angiography. Embolization appears to have a major role in treatment of such vascular malformations. (orig.)

  3. Allopatric distribution and diversification without niche shift in a bryophyte-feeding basal moth lineage (Lepidoptera: Micropterigidae).

    Science.gov (United States)

    Imada, Yume; Kawakita, Atsushi; Kato, Makoto

    2011-10-22

    The Lepidoptera represent one of the most successful radiations of plant-feeding insects, which predominantly took place within angiosperms beginning in the Cretaceous period. Angiosperm colonization is thought to underlie the evolutionary success of the Lepidoptera because angiosperms provide an enormous range of niches for ecological speciation to take place. By contrast, the basal lepidopteran lineage, Micropterigidae, remained unassociated with angiosperms since Jurassic times but nevertheless achieved a modest diversity in the Japanese Archipelago. We explored the causes and processes of diversification of the Japanese micropterigid moths by performing molecular phylogenetic analysis and extensive ecological surveying. Phylogenetic analysis recovered a monophyletic group of approximately 25 East Asian endemic species that feed exclusively on the liverwort Conocephalum conicum, suggesting that niche shifts hardly played a role in their diversification. Consistent with the low flying ability of micropterigid moths, the distributions of the Conocephalum specialists are each localized and allopatric, indicating that speciation by geographical isolation has been the major process shaping the diversity of Japanese Micropterigidae. To our knowledge, this is the largest radiation of herbivorous insects that does not accompany any apparent niche differentiation. We suggest that the significance of non-ecological speciation during the diversification of the Lepidoptera is commonly underestimated.

  4. Photo- and heterotrophic nitrogenase activity by the cyano-bacterium Nostoc in symbiosis with the bryophyte Anthoceros

    International Nuclear Information System (INIS)

    Steinberg, N.A.; Meeks, J.C.

    1987-01-01

    In symbiosis with Anthoceros, Nostoc is thought to do little or no photosynthesis. However, light-dependent 14 CO 2 fixation by symbiotic Nostoc, freshly isolated from pure cultures of the reconstituted Anthoceros-Nostoc association, was 16% of that by free-living Nostoc. A DCMU-resistant mutant of Nostoc was isolated that fixed CO 2 at rates comparable to wild-type in both symbiotic and free-living growth states. To determine if symbiotic Nostoc can use its photosynthate directly to fix nitrogen, acetylene reduction by Anthoceros associations reconstituted with wild-type Nostoc was compared to associations with the DCMU-resistant mutant. In wild-type Anthoceros-Nostoc acetylene reduction was inhibited 97% by 5 μM DCMU, while inhibition of the DCMU-resistant Nostoc association was only 63%. Additions of glucose, fructose, maltose or sucrose to wild-type associations completely restored DCMU-inhibited acetylene reduction in the light. Acetylene reduction in the dark was stimulated by glucose, attaining 84% of the uninhibited light-dependent value. The authors conclude that symbiotic Nostoc maintains a pool of photosynthate which supports nitrogenase activity. The pool can also be supplemented from plant sources

  5. Environmental monitoring program for the Ormen Lange Onshore Processing Plant and the Reserve Power Plant at Nyhamna, Gossa. Monitoring of vegetation and soil: re-analyses and establishment of new monitoring plots in 2010.; Miljoeovervaakingsprogram for Ormen Lange landanlegg og Reservegasskraftverk paa Nyhamna, Gossa. Overvaaking av vegetasjon og jord: gjenanalyser og nyetablering av overvaakingsfelter i 2010

    Energy Technology Data Exchange (ETDEWEB)

    Aarrestad, P.A.; Bakkestuen, V.; Stabbetorp, O.E.; Myklebost, Heidi

    2011-07-01

    conducted for three distinct habitats: wet oligotrophic heathland, and hummocks and lawns on raised bogs. The site in hummocks was established in 2010, whereas the other sites were re-analyzed with the same methods as in 2008. The parameters are monitored within delimited plots. The vegetation is monitored in permanently marked plots (0.5m x 0.5m), ten for each vegetation type at each site, in total 60 plots. In each plot the abundance of vascular plants, bryophytes and lichens are recorded, as well as the cover of the vegetation layers. Plant growth is measured in each site for 20 individuals of Betula nana, Calluna vulgaris, and Sphagnum capillifolium. Five samples of each of Racomitrium lanuginosum, Sphagnum capillifolium and Cladonia arbuscula from each site are collected and analyzed for plant nutrient content and the heavy metals copper (Cu), nickel (Ni), mercury (Hg), lead (Pb), and zinc (Zn). Ten soil samples are collected from each habitat at each site and analyzed for ph, Kjeldahl nitrogen, exchangeable elements, cation exchange capacity, and base saturation, a total of 30 samples from each site. The heavy metals Cu, Ni, Hg, Pb, and Zn are measured in samples of peat mud, 10 samples from each site. Peat water is analyzed for chemical nutrients and heavy metals, 10 samples from each site. The chemical analyses are conducted at the Norwegian Forest and Landscape Institute and NILU. There is still no indication that any pollution has affected the species composition of the vegetation. The vegetation is stable at both sites, both in wet heathland and in lawns on raised bogs. A few species occurring at low frequency in 2008 were not recorded in 2010, and some previously unrecorded species were found. This is normal for re-analyses of vegetation. There were significant differences in plant growth for Betula nana and Calluna vulgaris between the two sites, with highest growth rate at Aukra. This is most likely due to better climatic. (Author)

  6. Angiogenesis, Cancer, and Vascular Aging

    Directory of Open Access Journals (Sweden)

    Junji Moriya

    2017-10-01

    Full Text Available Several lines of evidence have revealed that the angiogenic response to ischemic injury declines with age, which might account for the increased morbidity and mortality of cardiovascular disease (CVD among the elderly. While impairment of angiogenesis with aging leads to delayed wound healing or exacerbation of atherosclerotic ischemic diseases, it also inhibits the progression of cancer. Age-related changes of angiogenesis have been considered to at least partly result from vascular aging or endothelial cell senescence. There is considerable evidence supporting the hypothesis that vascular cell senescence contributes to the pathogenesis of age-related CVD, suggesting that vascular aging could be an important therapeutic target. Since therapeutic angiogenesis is now regarded as a promising concept for patients with ischemic CVD, it has become even more important to understand the detailed molecular mechanisms underlying impairment of angiogenesis in older patients. To improve the usefulness of therapeutic angiogenesis, approaches are needed that can compensate for impaired angiogenic capacity in the elderly while not promoting the development or progression of malignancy. In this review, we briefly outline the mechanisms of angiogenesis and vascular aging, followed by a description of how vascular aging leads to impairment of angiogenesis. We also examine potential therapeutic approaches that could enhance angiogenesis and/or vascular function in the elderly, as well as discussing the possibility of anti-senescence therapy or reversal of endothelial cell senescence.

  7. Calcium dynamics in vascular smooth muscle

    OpenAIRE

    Amberg, Gregory C.; Navedo, Manuel F.

    2013-01-01

    Smooth muscle cells are ultimately responsible for determining vascular luminal diameter and blood flow. Dynamic changes in intracellular calcium are a critical mechanism regulating vascular smooth muscle contractility. Processes influencing intracellular calcium are therefore important regulators of vascular function with physiological and pathophysiological consequences. In this review we discuss the major dynamic calcium signals identified and characterized in vascular smooth muscle cells....

  8. Evolution of RLSB, a nuclear-encoded S1 domain RNA binding protein associated with post-transcriptional regulation of plastid-encoded rbcL mRNA in vascular plants.

    Science.gov (United States)

    Yerramsetty, Pradeep; Stata, Matt; Siford, Rebecca; Sage, Tammy L; Sage, Rowan F; Wong, Gane Ka-Shu; Albert, Victor A; Berry, James O

    2016-06-29

    RLSB, an S-1 domain RNA binding protein of Arabidopsis, selectively binds rbcL mRNA and co-localizes with Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) within chloroplasts of C3 and C4 plants. Previous studies using both Arabidopsis (C3) and maize (C4) suggest RLSB homologs are post-transcriptional regulators of plastid-encoded rbcL mRNA. While RLSB accumulates in all Arabidopsis leaf chlorenchyma cells, in C4 leaves RLSB-like proteins accumulate only within Rubisco-containing bundle sheath chloroplasts of Kranz-type species, and only within central compartment chloroplasts in the single cell C4 plant Bienertia. Our recent evidence implicates this mRNA binding protein as a primary determinant of rbcL expression, cellular localization/compartmentalization, and photosynthetic function in all multicellular green plants. This study addresses the hypothesis that RLSB is a highly conserved Rubisco regulatory factor that occurs in the chloroplasts all higher plants. Phylogenetic analysis has identified RLSB orthologs and paralogs in all major plant groups, from ancient liverworts to recent angiosperms. RLSB homologs were also identified in algae of the division Charophyta, a lineage closely related to land plants. RLSB-like sequences were not identified in any other algae, suggesting that it may be specific to the evolutionary line leading to land plants. The RLSB family occurs in single copy across most angiosperms, although a few species with two copies were identified, seemingly randomly distributed throughout the various taxa, although perhaps correlating in some cases with known ancient whole genome duplications. Monocots of the order Poales (Poaceae and Cyperaceae) were found to contain two copies, designated here as RLSB-a and RLSB-b, with only RLSB-a implicated in the regulation of rbcL across the maize developmental gradient. Analysis of microsynteny in angiosperms revealed high levels of conservation across eudicot species and for both paralogs in

  9. Injuries to the vascular endothelium: vascular wall and endothelial dysfunction.

    Science.gov (United States)

    Fisher, Mark

    2008-01-01

    Vascular endothelial injury has multiple elements, and this article focuses on ischemia-related processes that have particular relevance to ischemic stroke. Distinctions between necrotic and apoptotic cell death provide a basic science context in which to better understand the significance of classical core and penumbra concepts of acute stroke, with apoptotic processes particularly prominent in the penumbra. The mitochondria are understood to serve as a reservoir of proteins that mediate apoptosis. Oxidative stress pathways generating reactive oxygen species (ROS) are prominent in endothelial injury, both ischemic and nonischemic, with prominent roles of enzyme- and nonenzymemediated pathways; mitochondria once again have a critical role, particularly in the nonenzymatic pathways generating ROS. Inflammation also contributes to vascular endothelial injury, and endothelial cells have the capacity to rapidly increase expression of inflammatory mediators following ischemic challenge; this leads to enhanced leukocyte-endothelial interactions mediated by selectins and adhesion molecules. Preconditioning consists of a minor version of an injurious event, which in turn may protect vascular endothelium from injury following a more substantial event. Presence of the blood-brain barrier creates unique responses to endothelial injury, with permeability changes due to impairment of endothelial-matrix interactions compounding altered vasomotor tone and tissue perfusion mediated by nitric oxide. Pharmacological protection against vascular endothelial injury can be provided by several of the phosphodiesterases (cilostazol and dipyridamole), along with statins. Optimal clinical responses for protection of brain vascular endothelium may use preconditioning as a model, and will likely require combined protection against apoptosis, ROS, and inflammation.

  10. Non-invasive vascular imaging: assessing tumour vascularity

    International Nuclear Information System (INIS)

    Delorme, S.; Knopp, M.V.

    1998-01-01

    Non-invasive assessment of vascularity is a new diagnostic approach to characterise tumours. Vascular assessment is based on the pathophysiology of tumour angiogenesis and its diagnostic implications for tumour biology, prognosis and therapy response. Two current techniques investigating vascular features in addition to morphology are Doppler ultrasonography and contrast-enhanced MRI. Diagnostic differentiation has been shown to be possible with Doppler, and a high degree of observed vascularity could be linked to an aggressive course of the disease. Dynamic MRI using gadolinium chelates is already used clinically to detect and differentiate tumours. The histological correlation shows that capillary permeability is increased in malignant tumours and is the best criterion for differentiation from benign processes. Permeability and perfusion factors seem to be more diagnostic than overall vessel density. New clinical applications are currently being established for therapy monitoring. Further instrumental developments will bring harmonic imaging in Doppler, and faster imaging techniques, higher spatial resolution and novel pharmacokinetic concepts in MRI. Upcoming contrast agents for both Doppler and MRI will further improve estimation of intratumoural blood volume and vascular permeability. (orig.)

  11. Pediatric interventional radiology: vascular interventions

    International Nuclear Information System (INIS)

    Kandasamy, Devasenathipathy; Gamanagatti, Shivanand; Gupta, Arun Kumar

    2016-01-01

    Pediatric interventional radiology (PIR) comprises a range of minimally invasive diagnostic and therapeutic procedures that are performed using image guidance. PIR has emerged as an essential adjunct to various surgical and medical conditions. Over the years, technology has undergone dramatic and continuous evolution, making this speciality grow. In this review, the authors will discuss various vascular interventional procedures undertaken in pediatric patients. It is challenging for the interventional radiologist to accomplish a successful interventional procedure. There are many vascular interventional radiology procedures which are being performed and have changed the way the diseases are managed. Some of the procedures are life saving and have become the treatment of choice in those patients. The future is indeed bright for the practice and practitioners of pediatric vascular and non-vascular interventions. As more and more of the procedures that are currently being performed in adults get gradually adapted for use in the pediatric population, it may be possible to perform safe and successful interventions in many of the pediatric vascular lesions that are otherwise being referred for surgery. (author)

  12. A plant taxonomic survey of the Uranium City region, Lake Athabasca north shore, emphasizing the naturally colonizing plants on uranium mine and mill wastes and other human-disturbed sites

    International Nuclear Information System (INIS)

    Harms, V.L.

    1982-07-01

    A goal of this study was to acquire more complete baseline data on the existing flora of the Uranium City region, both in natural and human-disturbed sites. Emphasis was given to determining which plant species were naturally revegetating various abandoned uranium mine and mill waste disposal areas, other human-disturbed sites, and ecologically analogous sites. Another goal was to document the occurrence and distribution in the study region of rare and possibly endangered species. A further objective was to suggest regionally-occurring species with potential value for revegetating uranium mine and mill waste sites. Field investigations were carried out in the Uranium City region during August, 1981. During this time 1412 plant collections were made; a total of 366 plant species - trees, shrubs, forbs, graminoids, lichens, and bryophytes were recorded. The report includes an annotated checklist of plant species of the Uranium City region and a reference index of plant taxa indicating species that have high revegetation potential

  13. Lichens as indicators of fluoride emission from a phosphorus plant, Long Harbour, Newfoundland, Canada

    Energy Technology Data Exchange (ETDEWEB)

    Roberts, B.A.; Thompson, L.K.

    1980-01-01

    Fluoride concentrations in the terrestrial lichens Cladina rangiferina (L.) Harm. and Cladina stellaris (Opiz.) Brodo. were correlated inversely with distance from an industrial plant producing elemental phosphorus at Long Harbour, Nfld., in the direction (NE) of the prevailing wind. The fluoride concentrations ranged from 2830 ppm dry weight in a severely damaged area close to the emission source to 15.5 ppm (dry weight) 12 km NE of the industrial plant. Control samples from unpolluted areas had an average fluoride content of 6.4 ppm dry weight. The minimum observed damage symptoms occurred when these lichens had a fluoride content of 25 ppm dry weight. Damage symptoms included discolouration and structure loss. Discolouration effects were not as pronounced as observed on Abies balsamea (L.) Mill. or on Polytrichum commune (Hedw.) but combined with structure loss allowed the degree of damage to be readily identified in the field. Fluoride concentrations in these terrestrial lichens are compared with levels in soil humus, A. balsamea and some terrestrial bryophytes in four damage zones. The lichen tissue had, on average, twice as much fluoride as occurred in soil humus from the same site and about one half the amount of fluoride found in the terrestrial bryophyte P. commune. The effects of fluoride emissions on the epiphytic lichens Hypogymnia physodes (L.) W. Wats. and Alectoria sarmentosa (Ach.) Ach. in this area are also discussed.

  14. Spontaneous vegetation succession in extracted peatlands: a multi-site study

    Czech Academy of Sciences Publication Activity Database

    Konvalinková, Petra; Prach, Karel

    2010-01-01

    Roč. 82, č. 4 (2010), s. 423-435 ISSN 0032-7786 R&D Projects: GA AV ČR IAA600050702 Institutional research plan: CEZ:AV0Z60050516 Keywords : succession * vascular plants * bryophytes Subject RIV: EF - Botanics Impact factor: 2.792, year: 2010

  15. Prospects for Sphagnum bogs subject to high nitrogen deposition

    NARCIS (Netherlands)

    Limpens, J.

    2003-01-01

    S phagnum bogs harbour a wealth of rare vascular plant and bryophyte species, preserve an amazing pollen record and are long-term sinks for atmospheric carbon. Unfortunately, the relatively low production and decomposition rates, that make these bogs such important environments,

  16. Protecting rare, old-growth, forest-associated species under the Survey and Manage program guidelines of the northwest forest plan.

    Science.gov (United States)

    Randy Molina; Bruce G. Marcot; Robin. Lesher

    2006-01-01

    The Survey and Manage Program of the Northwest Forest Plan (MFP) represents an unparalleled attempt to protect rare, little-known species associated with late-successional and old-growth forests on more than 7.7 million ha of federal lands. Approximately 400 species of amphibians, bryophytes, fungi, lichens, mollusks, vascular plants, arthropod functional groups, and...

  17. Fetal origin of vascular aging

    Directory of Open Access Journals (Sweden)

    Shailesh Pitale

    2011-01-01

    Full Text Available Aging is increasingly regarded as an independent risk factor for development of cardiovascular diseases such as atherosclerosis and hypertension and their complications (e.g. MI and Stroke. It is well known that vascular disease evolve over decades with progressive accumulation of cellular and extracellular materials and many inflammatory processes. Metabolic syndrome, obesity and diabetes are conventionally recognized as risk factors for development of coronary vascular disease (CVD. These conditions are known to accelerate ageing process in general and vascular ageing in particular. Adverse events during intrauterine life may programme organ growth and favour disease later in life, popularly known as, ′Barker′s Hypothesis′. The notion of fetal programming implies that during critical periods of prenatal growth, changes in the hormonal and nutritional milieu of the conceptus may alter the full expression of the fetal genome, leading to permanent effects on a range of physiological.

  18. Imaging after vascular gene therapy

    International Nuclear Information System (INIS)

    Manninen, Hannu I.; Yang, Xiaoming

    2005-01-01

    Targets for cardiovascular gene therapy currently include limiting restenosis after balloon angioplasty and stent placement, inhibiting vein bypass graft intimal hyperplasia/stenosis, therapeutic angiogenesis for cardiac and lower-limb ischemia, and prevention of thrombus formation. While catheter angiography is still standard method to follow-up vascular gene transfer, other modern imaging techniques, especially intravascular ultrasound (IVUS), magnetic resonance (MR), and positron emission tomography (PET) imaging provide complementary information about the therapeutic effect of vascular gene transfer in humans. Although molecular imaging of therapeutic gene expression in the vasculatures is still in its technical development phase, it has already offered basic medical science an extremely useful in vivo evaluation tool for non- or minimally invasive imaging of vascular gene therapy

  19. Hydraulic efficiency and safety of vascular and non-vascular components in Pinus pinaster leaves.

    Science.gov (United States)

    Charra-Vaskou, Katline; Badel, Eric; Burlett, Régis; Cochard, Hervé; Delzon, Sylvain; Mayr, Stefan

    2012-09-01

    Leaves, the distal section of the soil-plant-atmosphere continuum, exhibit the lowest water potentials in a plant. In contrast to angiosperm leaves, knowledge of the hydraulic architecture of conifer needles is scant. We investigated the hydraulic efficiency and safety of Pinus pinaster needles, comparing different techniques. The xylem hydraulic conductivity (k(s)) and embolism vulnerability (P(50)) of both needle and stem were measured using the cavitron technique. The conductance and vulnerability of whole needles were measured via rehydration kinetics, and Cryo-SEM and 3D X-ray microtomographic observations were used as reference tools to validate physical measurements. The needle xylem of P. pinaster had lower hydraulic efficiency (k(s) = 2.0 × 10(-4) m(2) MPa(-1) s(-1)) and safety (P(50) = - 1.5 MPa) than stem xylem (k(s) = 7.7 × 10(-4) m(2) MPa(-1) s(-1); P(50) = - 3.6 to - 3.2 MPa). P(50) of whole needles (both extra-vascular and vascular pathways) was - 0.5 MPa, suggesting that non-vascular tissues were more vulnerable than the xylem. During dehydration to - 3.5 MPa, collapse and embolism in xylem tracheids, and gap formation in surrounding tissues were observed. However, a discrepancy in hydraulic and acoustic results appeared compared with visualizations, arguing for greater caution with these techniques when applied to needles. Our results indicate that the most distal parts of the water transport pathway are limiting for hydraulics of P. pinaster. Needle tissues exhibit a low hydraulic efficiency and low hydraulic safety, but may also act to buffer short-term water deficits, thus preventing xylem embolism.

  20. [Vascular Calcification - Pathological Mechanism and Clinical Application - . Role of vascular smooth muscle cells in vascular calcification].

    Science.gov (United States)

    Kurabayashi, Masahiko

    2015-05-01

    Vascular calcification is commonly seen with aging, chronic kidney disese (CKD), diabetes, and atherosclerosis, and is closely associated with cardiovascular morbidity and mortality. Vascular calcification has long been regarded as the final stage of degeneration and necrosis of arterial wall and a passive, unregulated process. However, it is now known to be an active and tightly regulated process involved with phenotypic transition of vascular smooth muscle cells (VSMC) that resembles bone mineralization. Briefly, calcium deposits of atherosclerotic plaque consist of hydroxyapatite and may appear identical to fully formed lamellar bone. By using a genetic fate mapping strategy, VSMC of the vascular media give rise to the majority of the osteochondrogenic precursor- and chondrocyte-like cells observed in the calcified arterial media of MGP (- / -) mice. Osteogenic differentiation of VSMC is characterized by the expression of bone-related molecules including bone morphogenetic protein (BMP) -2, Msx2 and osteopontin, which are produced by osteoblasts and chondrocytes. Our recent findings are that (i) Runx2 and Notch1 induce osteogenic differentiation, and (ii) advanced glycation end-product (AGE) /receptor for AGE (RAGE) and palmitic acid promote osteogenic differentiation of VSMC. To understand of the molecular mechanisms of vascular calcification is now under intensive research area.

  1. Vascular malforma- tions part 1 — normal and abnormal vascular ...

    African Journals Online (AJOL)

    Enrique

    to form the primitive vascular plexus. Angiogenesis is the formation of new vessels by sprouting or splitting of ... The differentiation of primitive vessels into arteries, veins or capillaries is determined by flow patterns .... identify, but it is probable that as time progresses further specific genetic defects related to the development ...

  2. Genetic Regulation of Vascular Development: Building the Zebrafish Vascular Tree

    NARCIS (Netherlands)

    R.L.J.M. Herpers (Robert)

    2010-01-01

    textabstractThe extensive networks of blood and lymphatic vessels within the vertebrate body are essential for the transport and delivery of fluids, gases, macromolecules and cells, and play important roles in facilitating immune responses. The development of the vascular tree requires a highly

  3. Phytogeography of the vascular páramo flora of Podocarpus National Park, south Ecuador

    NARCIS (Netherlands)

    Lozano, P.; Cleef, A.M.; Bussmann, R.W.

    2009-01-01

    A plant ecological transect study of the páramos of the Podocarpus massif, southern Ecuador, was carried out between July 2001 and August 2004. Including herbarium records 187 vascular plant genera were found, which were used for the present phytogeographical analysis. Three geographic flora

  4. Vascular flora and geoecology of Mont de la Table, Gaspesie, Quebec

    Science.gov (United States)

    Scott W. Bailey; Joann Hoy; Charles V. Cogbill

    2015-01-01

    The influence of substrate lithology on the distribution of many vascular and nonvascular plants has long been recognized, especially in alpine, subalpine, and other rocky habitats. In particular, plants have been classified as dependent on high-calcium substrates (i.e., calcicoles) based on common restriction to habitats developed in calcareous rocks, such as...

  5. Bryophytes use like atmospheric indicators of heavy metals in the metropolitan area of the Toluca Valley; Uso de briofitas como indicadores atmosfericos de metales pesados en la zona metropolitana del Valle de Toluca

    Energy Technology Data Exchange (ETDEWEB)

    Poblano B, J.

    2013-07-01

    The objective of this work was to evaluate the concentration of Ti, V, Cr, Mn, Fe, Cu, Zn and Pb in species of frequent and abundant bryophytes in the Metropolitan Area of the Toluca Valley (MATV). The concentration of the studied metals was determined in two different seasons (cold-dry and warm-humid) in 11 sites of the MATV, 7 of them classified as urban areas, 2 as transition areas and 2 as protected natural areas. Only epiphyte organisms found to a superior height of 100 cm of the floor were considered and the species determination was realized in the Sciences Faculty of the Universidad Autonoma del Estado de Mexico, while the processing of the samples was carried out in the Instituto Nacional de Investigaciones Nucleares (ININ). The samples processing consisted on separating the bryophytes of the bark of the trees, later on each one of the samples was washed, milled and homogenized, at the end they were subjected to a digestion process accelerated by microwaves. The concentration of Ti, V, Cr, Mn, Fe, Cu, Zn and Pb in the bryophytes was determined applying the X-rays Fluorescence technique, using a spectrometer Tx-2000 Ital-Structures, with a detector type Si (Li), a tube of Mo (40 kV, 30 m A) with 17,4 keV like excitement energy. Each sample was analyzed six times with a counting time of 500 seconds. Additionally enrichment factors were obtained using reference soils considered as not impacted by anthropogenic activities. With the obtained results space and temporary differences were established through descriptive statistic, also the enrichment factor to infer the possible origin of the metals was calculated, as well as the sites that could represent a risk for the health. The species more frequent and abundant were F. ciliaris and L. angustata, presenting the following tendency in their metals concentration Fe>Ti>Mn>Zn>Pb>V ≅ Cu>Cr, being observed that the temporality is a factor that influences in the metals concentration and that in general F. ciliaris

  6. [Vascular access guidelines for hemodialysis].

    Science.gov (United States)

    Rodríguez Hernández, J A; González Parra, E; Julián Gutiérrez, J M; Segarra Medrano, A; Almirante, B; Martínez, M T; Arrieta, J; Fernández Rivera, C; Galera, A; Gallego Beuter, J; Górriz, J L; Herrero, J A; López Menchero, R; Ochando, A; Pérez Bañasco, V; Polo, J R; Pueyo, J; Ruiz, Camps I; Segura Iglesias, R

    2005-01-01

    Quality of vascular access (VA) has a remarkable influence in hemodialysis patients outcomes. Dysfunction of VA represents a capital cause of morbi-mortality of these patients as well an increase in economical. Spanish Society of Neprhology, aware of the problem, has decided to carry out a revision of the issue with the aim of providing help in comprehensión and treatment related with VA problems, and achieving an homogenization of practices in three mayor aspects: to increase arteriovenous fistula utilization as first vascular access, to increment vascular access monitoring practice and rationalise central catheters use. We present a consensus document elaborated by a multidisciplinar group composed by nephrologists, vascular surgeons, interventional radiologysts, infectious diseases specialists and nephrological nurses. Along six chapters that cover patient education, creation of VA, care, monitoring, complications and central catheters, we present the state of the art and propose guidelines for the best practice, according different evidence based degrees, with the intention to provide help at the professionals in order to make aproppiate decissions. Several quality standars are also included.

  7. Image Quality in Vascular Radiology

    International Nuclear Information System (INIS)

    Vanhavere, F.; Struelens, L.

    2005-01-01

    In vascular radiology, the radiologists use the radiological image to diagnose or treat a specific vascular structure. From literature, we know that related doses are high and that large dose variability exists between different hospitals. The application o