Absolute variation of the mechanical characteristics of halloysite reinforced polyurethane nanocomposites complemented by Taguchi and ANOVA approaches

Directory of Open Access Journals (Sweden)

Tayser Sumer Gaaz

Full Text Available The variation of the results of the mechanical properties of halloysite nanotubes (HNTs reinforced thermoplastic polyurethane (TPU at different HNTs loadings was implemented as a tool for analysis. The preparation of HNTs-TPU nanocomposites was performed under four controlled parameters of mixing temperature, mixing speed, mixing time, and HNTs loading at three levels each to satisfy Taguchi method orthogonal array L9 aiming to optimize these parameters for the best measurements of tensile strength, Young’s modulus, and tensile strain (known as responses. The maximum variation of the experimental results for each response was determined and analysed based on the optimized results predicted by Taguchi method and ANOVA. It was found that the maximum absolute variations of the three mentioned responses are 69%, 352%, and 126%, respectively. The analysis has shown that the preparation of the optimized tensile strength requires 1 wt.% HNTs loading (excluding 2 wt.% and 3 wt.%, mixing temperature of 190 °C (excluding 200 °C and 210 °C, and mixing speed of 30 rpm (excluding 40 rpm and 50 rpm. In addition, the analysis has determined that the mixing time at 20 min has no effect on the preparation. The mentioned analysis was fortified by ANOVA, images of FESEM, and DSC results. Seemingly, the agglomeration and distribution of HNTs in the nanocomposite play an important role in the process. The outcome of the analysis could be considered as a very important step towards the reliability of Taguchi method. Keywords: Nanocomposite, Design-of-experiment, Taguchi optimization method, Mechanical properties

Stroke volume variation compared with pulse pressure variation and cardiac index changes for prediction of fluid responsiveness in mechanically ventilated patients

Directory of Open Access Journals (Sweden)

Randa Aly Soliman

2015-04-01

Conclusions: Baseline stroke volume variation ⩾8.15% predicted fluid responsiveness in mechanically ventilated patients with acute circulatory failure. The study also confirmed the ability of pulse pressure variation to predict fluid responsiveness.

Advances in variational and hemivariational inequalities theory, numerical analysis, and applications

CERN Document Server

Migórski, Stanisław; Sofonea, Mircea

2015-01-01

Highlighting recent advances in variational and hemivariational inequalities with an emphasis on theory, numerical analysis and applications, this volume serves as an indispensable resource to graduate students and researchers interested in the latest results from recognized scholars in this relatively young and rapidly-growing field. Particularly, readers will find that the volume’s results and analysis present valuable insights into the fields of pure and applied mathematics, as well as civil, aeronautical, and mechanical engineering. Researchers and students will find new results on well posedness to stationary and evolutionary inequalities and their rigorous proofs. In addition to results on modeling and abstract problems, the book contains new results on the numerical methods for variational and hemivariational inequalities. Finally, the applications presented illustrate the use of these results in the study of miscellaneous mathematical models which describe the contact between deformable bodies and a...

Variational submanifolds of Euclidean spaces

Science.gov (United States)

Krupka, D.; Urban, Z.; Volná, J.

2018-03-01

Systems of ordinary differential equations (or dynamical forms in Lagrangian mechanics), induced by embeddings of smooth fibered manifolds over one-dimensional basis, are considered in the class of variational equations. For a given non-variational system, conditions assuring variationality (the Helmholtz conditions) of the induced system with respect to a submanifold of a Euclidean space are studied, and the problem of existence of these "variational submanifolds" is formulated in general and solved for second-order systems. The variational sequence theory on sheaves of differential forms is employed as a main tool for the analysis of local and global aspects (variationality and variational triviality). The theory is illustrated by examples of holonomic constraints (submanifolds of a configuration Euclidean space) which are variational submanifolds in geometry and mechanics.

Using stamping punch force variation for the identification of changes in lubrication and wear mechanism

Science.gov (United States)

Voss, B. M.; Pereira, M. P.; Rolfe, B. F.; Doolan, M. C.

2017-09-01

The growth in use of Advanced High Strength Steels in the automotive industry for light-weighting and safety has increased the rates of tool wear in sheet metal stamping. This is an issue that adds significant costs to production in terms of manual inspection and part refinishing. To reduce these costs, a tool condition monitoring system is required and a firm understanding of process signal variation must form the foundation for any such monitoring system. Punch force is a stamping process signal that is widely collected by industrial presses and has been linked closely to part quality and tool condition, making it an ideal candidate as a tool condition monitoring signal. In this preliminary investigation, the variation of punch force due to different lubrication conditions and progressive wear are examined. Linking specific punch force signature changes to developing lubrication and wear events is valuable for die wear and stamping condition monitoring. A series of semi-industrial channel forming trials were conducted under different lubrication regimes and progressive die wear. Punch force signatures were captured for each part and Principal Component Analysis (PCA) was applied to determine the key Principal Components of the signature data sets. These Principal Components were linked to the evolution of friction conditions over the course of the stroke for the different lubrication regimes and mechanism of galling wear. As a result, variation in punch force signatures were correlated to the current mechanism of wear dominant on the formed part; either abrasion or adhesion, and to changes in lubrication mechanism. The outcomes of this study provide important insights into punch force signature variation, that will provide a foundation for future work into the development of die wear and lubrication monitoring systems for sheet metal stamping.

Mechanisms of Vowel Variation in African American English.

Science.gov (United States)

Holt, Yolanda Feimster

2018-02-15

This research explored mechanisms of vowel variation in African American English by comparing 2 geographically distant groups of African American and White American English speakers for participation in the African American Shift and the Southern Vowel Shift. Thirty-two male (African American: n = 16, White American controls: n = 16) lifelong residents of cities in eastern and western North Carolina produced heed,hid,heyd,head,had,hod,hawed,whod,hood,hoed,hide,howed,hoyd, and heard 3 times each in random order. Formant frequency, duration, and acoustic analyses were completed for the vowels /i, ɪ, e, ɛ, æ, ɑ, ɔ, u, ʊ, o, aɪ, aʊ, oɪ, ɝ/ produced in the listed words. African American English speakers show vowel variation. In the west, the African American English speakers are participating in the Southern Vowel Shift and hod fronting of the African American Shift. In the east, neither the African American English speakers nor their White peers are participating in the Southern Vowel Shift. The African American English speakers show limited participation in the African American Shift. The results provide evidence of regional and socio-ethnic variation in African American English in North Carolina.

Dynamical basis sets for algebraic variational calculations in quantum-mechanical scattering theory

Science.gov (United States)

Sun, Yan; Kouri, Donald J.; Truhlar, Donald G.; Schwenke, David W.

1990-01-01

New basis sets are proposed for linear algebraic variational calculations of transition amplitudes in quantum-mechanical scattering problems. These basis sets are hybrids of those that yield the Kohn variational principle (KVP) and those that yield the generalized Newton variational principle (GNVP) when substituted in Schlessinger's stationary expression for the T operator. Trial calculations show that efficiencies almost as great as that of the GNVP and much greater than the KVP can be obtained, even for basis sets with the majority of the members independent of energy.

Quantum mechanical algebraic variational methods for inelastic and reactive molecular collisions

Science.gov (United States)

Schwenke, David W.; Haug, Kenneth; Zhao, Meishan; Truhlar, Donald G.; Sun, Yan

1988-01-01

The quantum mechanical problem of reactive or nonreactive scattering of atoms and molecules is formulated in terms of square-integrable basis sets with variational expressions for the reactance matrix. Several formulations involving expansions of the wave function (the Schwinger variational principle) or amplitude density (a generalization of the Newton variational principle), single-channel or multichannel distortion potentials, and primitive or contracted basis functions are presented and tested. The test results, for inelastic and reactive atom-diatom collisions, suggest that the methods may be useful for a variety of collision calculations and may allow the accurate quantal treatment of systems for which other available methods would be prohibitively expensive.

Frictional granular mechanics: A variational approach

Energy Technology Data Exchange (ETDEWEB)

Holtzman, R.; Silin, D.B.; Patzek, T.W.

2009-10-16

The mechanical properties of a cohesionless granular material are evaluated from grain-scale simulations. Intergranular interactions, including friction and sliding, are modeled by a set of contact rules based on the theories of Hertz, Mindlin, and Deresiewicz. A computer generated, three-dimensional, irregular pack of spherical grains is loaded by incremental displacement of its boundaries. Deformation is described by a sequence of static equilibrium configurations of the pack. A variational approach is employed to find the equilibrium configurations by minimizing the total work against the intergranular loads. Effective elastic moduli are evaluated from the intergranular forces and the deformation of the pack. Good agreement between the computed and measured moduli, achieved with no adjustment of material parameters, establishes the physical soundness of the proposed model.

Social carry-over effects on non-social behavioral variation: mechanisms and consequences

Directory of Open Access Journals (Sweden)

Petri Toivo Niemelä

2015-05-01

Full Text Available The field of animal personality is interested in decomposing behaviors into different levels of variation, with its present focus on the ecological and evolutionary causes and consequences of expressed variation. Recently the role of the social environment, i.e. social partners, has been suggested to affect behavioral variation and induce selection on animal personality. Social partner effects exist because characters of social partners (e.g. size, behavior, affect the behavioral expression of a focal individual. Here, we 1 first review the proximate mechanisms underlying the social partner effects on behavioral expression and the timescales at which such effects might take place. We then 2 discuss how within- and among-individual variation in single behaviors and covariation between multiple behaviors, caused by social partners, can carry-over to non-social behaviors expressed outside the social context. Finally, we 3 highlight evolutionary consequences of social carry-over effects to non-social behaviors and 4 suggest study designs and statistical approaches which can be applied to study the nature and evolutionary consequences of social carry-over effects on non-social behaviors. Understanding the proximate mechanisms underpinning the social partner effects is important since it opens a door for deeper understanding of how social environments can affect behavioral variation and covariation at multiple levels, and the evolution of non-social behaviors (i.e. exploration, activity, boldness that are affected by social interactions.

Absolute variation of the mechanical characteristics of halloysite reinforced polyurethane nanocomposites complemented by Taguchi and ANOVA approaches

Science.gov (United States)

Gaaz, Tayser Sumer; Sulong, Abu Bakar; Kadhum, Abdul Amir H.; Nassir, Mohamed H.; Al-Amiery, Ahmed A.

The variation of the results of the mechanical properties of halloysite nanotubes (HNTs) reinforced thermoplastic polyurethane (TPU) at different HNTs loadings was implemented as a tool for analysis. The preparation of HNTs-TPU nanocomposites was performed under four controlled parameters of mixing temperature, mixing speed, mixing time, and HNTs loading at three levels each to satisfy Taguchi method orthogonal array L9 aiming to optimize these parameters for the best measurements of tensile strength, Young's modulus, and tensile strain (known as responses). The maximum variation of the experimental results for each response was determined and analysed based on the optimized results predicted by Taguchi method and ANOVA. It was found that the maximum absolute variations of the three mentioned responses are 69%, 352%, and 126%, respectively. The analysis has shown that the preparation of the optimized tensile strength requires 1 wt.% HNTs loading (excluding 2 wt.% and 3 wt.%), mixing temperature of 190 °C (excluding 200 °C and 210 °C), and mixing speed of 30 rpm (excluding 40 rpm and 50 rpm). In addition, the analysis has determined that the mixing time at 20 min has no effect on the preparation. The mentioned analysis was fortified by ANOVA, images of FESEM, and DSC results. Seemingly, the agglomeration and distribution of HNTs in the nanocomposite play an important role in the process. The outcome of the analysis could be considered as a very important step towards the reliability of Taguchi method.

Special Semester titled Geometric mechanics : variational and stochastic methods : CIB, Lausanne, Switzerland, January-June 2015

CERN Document Server

Cruzeiro, Ana; Holm, Darryl

2017-01-01

Collecting together contributed lectures and mini-courses, this book details the research presented in a special semester titled “Geometric mechanics – variational and stochastic methods” run in the first half of 2015 at the Centre Interfacultaire Bernoulli (CIB) of the Ecole Polytechnique Fédérale de Lausanne. The aim of the semester was to develop a common language needed to handle the wide variety of problems and phenomena occurring in stochastic geometric mechanics. It gathered mathematicians and scientists from several different areas of mathematics (from analysis, probability, numerical analysis and statistics, to algebra, geometry, topology, representation theory, and dynamical systems theory) and also areas of mathematical physics, control theory, robotics, and the life sciences, with the aim of developing the new research area in a concentrated joint effort, both from the theoretical and applied points of view. The lectures were given by leading specialists in different areas of mathematics a...

A variational integrators approach to second order modeling and identification of linear mechanical systems

NARCIS (Netherlands)

Bruschetta, M.; Saccon, A.; Picci, G.

2014-01-01

The theory of variational integration provides a systematic procedure to discretize the equations of motion of a mechanical system, preserving key properties of the continuous time flow. The discrete-time model obtained by variational integration theory inherits structural conditions which in

Integrative analysis of RNA, translation, and protein levels reveals distinct regulatory variation across humans.

Science.gov (United States)

Cenik, Can; Cenik, Elif Sarinay; Byeon, Gun W; Grubert, Fabian; Candille, Sophie I; Spacek, Damek; Alsallakh, Bilal; Tilgner, Hagen; Araya, Carlos L; Tang, Hua; Ricci, Emiliano; Snyder, Michael P

2015-11-01

Elucidating the consequences of genetic differences between humans is essential for understanding phenotypic diversity and personalized medicine. Although variation in RNA levels, transcription factor binding, and chromatin have been explored, little is known about global variation in translation and its genetic determinants. We used ribosome profiling, RNA sequencing, and mass spectrometry to perform an integrated analysis in lymphoblastoid cell lines from a diverse group of individuals. We find significant differences in RNA, translation, and protein levels suggesting diverse mechanisms of personalized gene expression control. Combined analysis of RNA expression and ribosome occupancy improves the identification of individual protein level differences. Finally, we identify genetic differences that specifically modulate ribosome occupancy--many of these differences lie close to start codons and upstream ORFs. Our results reveal a new level of gene expression variation among humans and indicate that genetic variants can cause changes in protein levels through effects on translation. © 2015 Cenik et al.; Published by Cold Spring Harbor Laboratory Press.

Variational analysis and aerospace engineering mathematical challenges for the aerospace of the future

CERN Document Server

Mohammadi, Bijan; Pironneau, Olivier; Cipolla, Vittorio

2016-01-01

This book presents papers surrounding the extensive discussions that took place from the ‘Variational Analysis and Aerospace Engineering’ workshop held at the Ettore Majorana Foundation and Centre for Scientific Culture in 2015. Contributions to this volume focus on advanced mathematical methods in aerospace engineering and industrial engineering such as computational fluid dynamics methods, optimization methods in aerodynamics, optimum controls, dynamic systems, the theory of structures, space missions, flight mechanics, control theory, algebraic geometry for CAD applications, and variational methods and applications. Advanced graduate students, researchers, and professionals in mathematics and engineering will find this volume useful as it illustrates current collaborative research projects in applied mathematics and aerospace engineering.

Thermodynamic analysis of a beta-type Stirling engine with rhombic drive mechanism

International Nuclear Information System (INIS)

Aksoy, Fatih; Cinar, Can

2013-01-01

Highlights: • Thermodynamic analysis of Stirling engine with rhombic-drive mechanism was performed. • The analysis was performed for smooth and grooved displacer cylinders. • The convective heat transfer coefficient was predicted using the experimental results. • The experimental results was compared with the theoretical results. - Abstract: This paper presents a theoretical investigation on kinematic and thermodynamic analysis of a beta type Stirling engine with rhombic-drive mechanism. Variations in the hot and cold volumes of the engine were calculated using kinematic relations. Two different displacer cylinders were investigated: one of them had smooth inner surface and the other had axial slots grooved into the cylinder to increase the heat transfer area. The effects of the slots grooved into the displacer cylinder inner surface on the performance were calculated using nodal analysis in Fortran. The effects of working fluid mass on cyclic work were investigated using 200, 300 and 400 W/m 2 K convective heat transfer coefficients for smooth and grooved displacer cylinders. The variation of engine power with engine speed was obtained by using the same convective heat transfer coefficients and isothermal conditions. The convective heat transfer coefficient was predicted as 104 W/m 2 K using the experimental results measured from the prototype engine under atmospheric conditions. The variation in cyclic work determined by the experimental study was also compared with the theoretical results obtained for different convective heat transfer coefficients and isothermal conditions

Applications of exterior difference systems to variations in discrete mechanics

International Nuclear Information System (INIS)

Xie Zheng; Li Hongbo

2008-01-01

In discrete mechanics, difference equations describe the fundamental physical laws and exhibit many geometric properties. Can these equations be obtained in a geometric way? Using some techniques in exterior difference systems, we investigate the discrete variational problem. As an application, we give a positive answer to the above question for the discrete Newton's, Euler-Lagrange, and Hamilton's equations

Variation in Definition of Prolonged Mechanical Ventilation.

Science.gov (United States)

Rose, Louise; McGinlay, Michael; Amin, Reshma; Burns, Karen Ea; Connolly, Bronwen; Hart, Nicholas; Jouvet, Philippe; Katz, Sherri; Leasa, David; Mawdsley, Cathy; McAuley, Danny F; Schultz, Marcus J; Blackwood, Bronagh

2017-10-01

Consistency of definitional criteria for terminology applied to describe subject cohorts receiving mechanical ventilation within ICU and post-acute care settings is important for understanding prevalence, risk stratification, effectiveness of interventions, and projections for resource allocation. Our objective was to quantify the application and definition of terms for prolonged mechanical ventilation. We conducted a scoping review of studies (all designs except single-case study) reporting a study population (adult and pediatric) using the term prolonged mechanical ventilation or a synonym. We screened 5,331 references, reviewed 539 full-text references, and excluded 120. Of the 419 studies (representing 38 countries) meeting inclusion criteria, 297 (71%) reported data on a heterogeneous subject cohort, and 66 (16%) included surgical subjects only (46 of those 66, 70% cardiac surgery). Other studies described COPD (16, 4%), trauma (22, 5%), neuromuscular (17, 4%), and sepsis (1, 0.2%) cohorts. A total of 741 terms were used to refer to the 419 study cohorts. The most common terms were: prolonged mechanical ventilation (253, 60%), admission to specialized unit (107, 26%), and long-term mechanical ventilation (79, 19%). Some authors (282, 67%) defined their cohorts based on duration of mechanical ventilation, with 154 studies (55%) using this as the sole criterion. We identified 37 different durations of ventilation ranging from 5 h to 1 y, with > 21 d being the most common (28 of 282, 7%). For studies describing a surgical cohort, minimum ventilation duration required for inclusion was ≥ 24 h for 20 of 66 studies (30%). More than half of all studies (237, 57%) did not provide a reason/rationale for definitional criteria used, with only 28 studies (7%) referring to a consensus definition. We conclude that substantial variation exists in the terminology and definitional criteria for cohorts of subjects receiving prolonged mechanical ventilation. Standardization of

Handheld mechanical nociceptive threshold testing in dairy cows - intra-individual variation, inter-observer agreement and variation over time.

Science.gov (United States)

Raundal, Peter M; Andersen, Pia H; Toft, Nils; Forkman, Björn; Munksgaard, Lene; Herskin, Mette S

2014-11-01

To examine the use of handheld methodology to assess mechanical nociceptive threshold (MNT) on cows kept loose-housed. Prospective randomized partial cross-over experimental study. A one-factor (test day) design was used to evaluate MNT over time. One hundred and fifteen healthy, loose-housed Danish Holstein cattle. We evaluated intra-individual variation, inter-observer agreement and variation over time of MNT using two handheld devices and two stimulation sites. Mechanical, ramped stimulations were performed with an algometer (6.5 mm diameter steel probe, 0-10.0 kgf) or an electronic von Frey device (plastic tip with diameter 0.8 mm, 0-1000 gf). Each cow received 5-6 consecutive stimulations within a 2 × 5 cm skin area on the dorsal or lateral aspect of the left third metatarsus until an avoidance reaction occurred. We investigated the difference in precision [expressed as coefficient of variation (CV)] between the combinations of devices and stimulation sites. The inter-observer agreement and the difference in MNT between test day 1, 3, 7, 10 and 24 were investigated for selected combinations. Data were analysed in mixed models and Bland-Altman as relevant. The CVs did not differ [range 0.34-0.52 (p = 0.1)]. Difference between observers (95% limits) was 0.2 kgf (2.8) and 4 gf (369) for the algometer and von Frey device, respectively. Mechanical nociceptive threshold increased from 361 on test day one to 495 gf on test day 24 (p < 0.01). All methods showed a high degree of intra-individual variation, and no combination of device and stimulation site showed superior precision. Mean difference between observers was low, and MNT was not consistent over time. Further development of the methods is required before they can be used in research to investigate possible relations between claw lesions and hyperalgesia. © 2014 The Authors Veterinary Anaesthesia and Analgesia published by John Wiley & Sons Ltd on behalf of Association of Veterinary Anaesthetists and the

Introduction to global variational geometry

CERN Document Server

Krupka, Demeter

2015-01-01

The book is devoted to recent research in the global variational theory on smooth manifolds. Its main objective is an extension of the classical variational calculus on Euclidean spaces to (topologically nontrivial) finite-dimensional smooth manifolds; to this purpose the methods of global analysis of differential forms are used. Emphasis is placed on the foundations of the theory of variational functionals on fibered manifolds - relevant geometric structures for variational principles in geometry, physical field theory and higher-order fibered mechanics. The book chapters include: - foundations of jet bundles and analysis of differential forms and vector fields on jet bundles, - the theory of higher-order integral variational functionals for sections of a fibred space, the (global) first variational formula in infinitesimal and integral forms- extremal conditions and the discussion of Noether symmetries and generalizations,- the inverse problems of the calculus of variations of Helmholtz type- variational se...

Convergence analysis of variational and non-variational multigrid algorithms for the Laplace-Beltrami operator

KAUST Repository

Bonito, Andrea

2012-09-01

We design and analyze variational and non-variational multigrid algorithms for the Laplace-Beltrami operator on a smooth and closed surface. In both cases, a uniform convergence for the V -cycle algorithm is obtained provided the surface geometry is captured well enough by the coarsest grid. The main argument hinges on a perturbation analysis from an auxiliary variational algorithm defined directly on the smooth surface. In addition, the vanishing mean value constraint is imposed on each level, thereby avoiding singular quadratic forms without adding additional computational cost. Numerical results supporting our analysis are reported. In particular, the algorithms perform well even when applied to surfaces with a large aspect ratio. © 2011 American Mathematical Society.

Analysis of Noise Mechanisms in Cell-Size Control.

Science.gov (United States)

Modi, Saurabh; Vargas-Garcia, Cesar Augusto; Ghusinga, Khem Raj; Singh, Abhyudai

2017-06-06

At the single-cell level, noise arises from multiple sources, such as inherent stochasticity of biomolecular processes, random partitioning of resources at division, and fluctuations in cellular growth rates. How these diverse noise mechanisms combine to drive variations in cell size within an isoclonal population is not well understood. Here, we investigate the contributions of different noise sources in well-known paradigms of cell-size control, such as adder (division occurs after adding a fixed size from birth), sizer (division occurs after reaching a size threshold), and timer (division occurs after a fixed time from birth). Analysis reveals that variation in cell size is most sensitive to errors in partitioning of volume among daughter cells, and not surprisingly, this process is well regulated among microbes. Moreover, depending on the dominant noise mechanism, different size-control strategies (or a combination of them) provide efficient buffering of size variations. We further explore mixer models of size control, where a timer phase precedes/follows an adder, as has been proposed in Caulobacter crescentus. Although mixing a timer and an adder can sometimes attenuate size variations, it invariably leads to higher-order moments growing unboundedly over time. This results in a power-law distribution for the cell size, with an exponent that depends inversely on the noise in the timer phase. Consistent with theory, we find evidence of power-law statistics in the tail of C. crescentus cell-size distribution, although there is a discrepancy between the observed power-law exponent and that predicted from the noise parameters. The discrepancy, however, is removed after data reveal that the size added by individual newborns in the adder phase itself exhibits power-law statistics. Taken together, this study provides key insights into the role of noise mechanisms in size homeostasis, and suggests an inextricable link between timer-based models of size control and

A variationally coupled FE-BE method for elasticity and fracture mechanics

Science.gov (United States)

Lu, Y. Y.; Belytschko, T.; Liu, W. K.

1991-01-01

A new method for coupling finite element and boundary element subdomains in elasticity and fracture mechanics problems is described. The essential feature of this new method is that a single variational statement is obtained for the entire domain, and in this process the terms associated with tractions on the interfaces between the subdomains are eliminated. This provides the additional advantage that the ambiguities associated with the matching of discontinuous tractions are circumvented. The method leads to a direct procedure for obtaining the discrete equations for the coupled problem without any intermediate steps. In order to evaluate this method and compare it with previous methods, a patch test for coupled procedures has been devised. Evaluation of this variationally coupled method and other methods, such as stiffness coupling and constraint traction matching coupling, shows that this method is substantially superior. Solutions for a series of fracture mechanics problems are also reported to illustrate the effectiveness of this method.

Handheld mechanical nociceptive threshold testing in dairy cows – intra-individual variation, inter-observer agreement and variation over time

Science.gov (United States)

Raundal, Peter M; Andersen, Pia H; Toft, Nils; Forkman, Björn; Munksgaard, Lene; Herskin, Mette S

2014-01-01

Objective To examine the use of handheld methodology to assess mechanical nociceptive threshold (MNT) on cows kept loose-housed. Study design Prospective randomized partial cross-over experimental study. A one-factor (test day) design was used to evaluate MNT over time. Animals One hundred and fifteen healthy, loose-housed Danish Holstein cattle. Methods We evaluated intra-individual variation, inter-observer agreement and variation over time of MNT using two handheld devices and two stimulation sites. Mechanical, ramped stimulations were performed with an algometer (6.5 mm diameter steel probe, 0–10.0 kgf) or an electronic von Frey device (plastic tip with diameter 0.8 mm, 0–1000 gf). Each cow received 5–6 consecutive stimulations within a 2 × 5 cm skin area on the dorsal or lateral aspect of the left third metatarsus until an avoidance reaction occurred. We investigated the difference in precision [expressed as coefficient of variation (CV)] between the combinations of devices and stimulation sites. The inter-observer agreement and the difference in MNT between test day 1, 3, 7, 10 and 24 were investigated for selected combinations. Data were analysed in mixed models and Bland-Altman as relevant. Results The CVs did not differ [range 0.34–0.52 (p = 0.1)]. Difference between observers (95% limits) was 0.2 kgf (2.8) and 4 gf (369) for the algometer and von Frey device, respectively. Mechanical nociceptive threshold increased from 361 on test day one to 495 gf on test day 24 (p < 0.01). Conclusion and clinical relevance All methods showed a high degree of intra-individual variation, and no combination of device and stimulation site showed superior precision. Mean difference between observers was low, and MNT was not consistent over time. Further development of the methods is required before they can be used in research to investigate possible relations between claw lesions and hyperalgesia. PMID:24734991

A unified approach to the analysis and design of elasto-plastic structures with mechanical contact

Science.gov (United States)

Bendsoe, Martin P.; Olhoff, Niels; Taylor, John E.

1990-01-01

With structural design in mind, a new unified variational model has been developed which represents the mechanics of deformation elasto-plasticity with unilateral contact conditions. For a design problem formulated as maximization of the load carrying capacity of a structure under certain constraints, the unified model allows for a simultaneous analysis and design synthesis for a whole range of mechanical behavior.

Comparative analysis of face recognition techniques with illumination variation

International Nuclear Information System (INIS)

Jondhale, K C; Waghmare, L M

2010-01-01

Illumination variation is one of the major challenges in the face recognition. To deal with this problem, this paper presents comparative analysis of three different techniques. First, the DCT is employed to compensate for illumination variations in the logarithm domain. Since illumination variation lies mainly in the low frequency band, an appropriate number of DCT coefficients are truncated to reduce the variations under different lighting conditions. The nearest neighbor classifier based on Euclidean distance is employed for classification. Second, the performance of PCA is checked on normalized image. PCA is a technique used to reduce multidimensional data sets to a lower dimension for analysis. Third, LDA based methods gives a satisfactory result under controlled lighting condition. But its performance under large illumination variation is not satisfactory. So, the performance of LDA is checked on normalized image. Experimental results on the Yale B and ORL database show that the proposed approach of application of PCA and LDA on normalized dataset improves the performance significantly for the face images with large illumination variations.

Spatial and temporal variations of the callus mechanical properties during bone transport

Energy Technology Data Exchange (ETDEWEB)

Mora-Macias, J.; Reina-Romo, E.; Pajares, A.; Miranda, P.; Dominguez, J.

2016-07-01

Nanoindentation allows obtaining the elastic modulus and the hardness of materials point by point. This technique has been used to assess the mechanical propeties of the callus during fracture healing. However, as fas as the authors know, the evaluation of mechanical properties by this technique of the distraction and the docking-site calluses generated during bone transport have not been reported yet. Therefore, the aim of this work is using nanoindentation to assess the spatial and temporal variation of the elastic modulus of the woven bone generated during bone transport. Nanoindentation measurements were carried out using 6 samples from sheep sacrificed at different stages of the bone transport experiments. The results obtained show an important heterogeneity of the elastic modulus of the woven bone without spatial trends. In the case of temporal variation, a clear increase of the mean elastic modulus with time after surgery was observed (from 7±2GPa 35 days after surgery to 14±2GPa 525 days after surgery in the distraction callus and a similar increase in the docking site callus). Comparison with the evolution of the elastic modulus in the woven bone generated during fracture healing shows that mechanical properties increase slower in the case of the woven bone generated during bone transport. (Author)

Design of governance in virtual communities: definition, mechanisms, and variation patterns

DEFF Research Database (Denmark)

Li-Ying, Jason; Salomo, Søren

2013-01-01

A fast-growing stream of literature has shown tremendous interests in the ‘wisdom of crowds’, embedded in various forms of Virtual Communities (VCs). However, it difficult to design an appropriate governance structure for VCs because: (1) it is not clear what governance exactly is in VCs; (2) our...... to underpin the theoretical and practical implications of our research endeavour....... knowledge on how key governance mechanisms differ among various types of VCs is limited to date; (3) the variation patterns of governance mechanisms are far from fully explored to guide the design of governance in VCs. Therefore, this paper seeks to propose a working definition for governance in VCs...

Variational analysis of regular mappings theory and applications

CERN Document Server

Ioffe, Alexander D

2017-01-01

This monograph offers the first systematic account of (metric) regularity theory in variational analysis. It presents new developments alongside classical results and demonstrates the power of the theory through applications to various problems in analysis and optimization theory. The origins of metric regularity theory can be traced back to a series of fundamental ideas and results of nonlinear functional analysis and global analysis centered around problems of existence and stability of solutions of nonlinear equations. In variational analysis, regularity theory goes far beyond the classical setting and is also concerned with non-differentiable and multi-valued operators. The present volume explores all basic aspects of the theory, from the most general problems for mappings between metric spaces to those connected with fairly concrete and important classes of operators acting in Banach and finite dimensional spaces. Written by a leading expert in the field, the book covers new and powerful techniques, whic...

Azimuthal angle correlations at large rapidities. Revisiting density variation mechanism

Energy Technology Data Exchange (ETDEWEB)

Gotsman, E. [Tel Aviv University, Department of Particle Physics, Raymond and Beverly Sackler Faculty of Exact Science, School of Physics and Astronomy, Tel Aviv (Israel); Levin, E. [Tel Aviv University, Department of Particle Physics, Raymond and Beverly Sackler Faculty of Exact Science, School of Physics and Astronomy, Tel Aviv (Israel); Universidad Tecnica Federico Santa Maria, Departemento de Fisica, Valparaiso (Chile); Centro Cientifico-Tecnologico de Valparaiso, Valparaiso (Chile)

2017-11-15

We discuss the angular correlation present in hadron-hadron collisions at large rapidity difference (anti α{sub S}y{sub 12} >> 1). We find that in the CGC/saturation approach the largest contribution stems from the density variation mechanism. Our principal results are that the odd Fourier harmonics (v{sub 2n+1}) decrease substantially as a function of y{sub 12}, while the even harmonics (v{sub 2n}) increase considerably with the growth of y{sub 12}. (orig.)

Methodology for dimensional variation analysis of ITER integrated systems

International Nuclear Information System (INIS)

Fuentes, F. Javier; Trouvé, Vincent; Cordier, Jean-Jacques; Reich, Jens

2016-01-01

Highlights: • Tokamak dimensional management methodology, based on 3D variation analysis, is presented. • Dimensional Variation Model implementation workflow is described. • Methodology phases are described in detail. The application of this methodology to the tolerance analysis of ITER Vacuum Vessel is presented. • Dimensional studies are a valuable tool for the assessment of Tokamak PCR (Project Change Requests), DR (Deviation Requests) and NCR (Non-Conformance Reports). - Abstract: The ITER machine consists of a large number of complex systems highly integrated, with critical functional requirements and reduced design clearances to minimize the impact in cost and performances. Tolerances and assembly accuracies in critical areas could have a serious impact in the final performances, compromising the machine assembly and plasma operation. The management of tolerances allocated to part manufacture and assembly processes, as well as the control of potential deviations and early mitigation of non-compliances with the technical requirements, is a critical activity on the project life cycle. A 3D tolerance simulation analysis of ITER Tokamak machine has been developed based on 3DCS dedicated software. This integrated dimensional variation model is representative of Tokamak manufacturing functional tolerances and assembly processes, predicting accurate values for the amount of variation on critical areas. This paper describes the detailed methodology to implement and update the Tokamak Dimensional Variation Model. The model is managed at system level. The methodology phases are illustrated by its application to the Vacuum Vessel (VV), considering the status of maturity of VV dimensional variation model. The following topics are described in this paper: • Model description and constraints. • Model implementation workflow. • Management of input and output data. • Statistical analysis and risk assessment. The management of the integration studies based on

Methodology for dimensional variation analysis of ITER integrated systems

Energy Technology Data Exchange (ETDEWEB)

Fuentes, F. Javier, E-mail: FranciscoJavier.Fuentes@iter.org [ITER Organization, Route de Vinon-sur-Verdon—CS 90046, 13067 St Paul-lez-Durance (France); Trouvé, Vincent [Assystem Engineering & Operation Services, rue J-M Jacquard CS 60117, 84120 Pertuis (France); Cordier, Jean-Jacques; Reich, Jens [ITER Organization, Route de Vinon-sur-Verdon—CS 90046, 13067 St Paul-lez-Durance (France)

2016-11-01

Highlights: • Tokamak dimensional management methodology, based on 3D variation analysis, is presented. • Dimensional Variation Model implementation workflow is described. • Methodology phases are described in detail. The application of this methodology to the tolerance analysis of ITER Vacuum Vessel is presented. • Dimensional studies are a valuable tool for the assessment of Tokamak PCR (Project Change Requests), DR (Deviation Requests) and NCR (Non-Conformance Reports). - Abstract: The ITER machine consists of a large number of complex systems highly integrated, with critical functional requirements and reduced design clearances to minimize the impact in cost and performances. Tolerances and assembly accuracies in critical areas could have a serious impact in the final performances, compromising the machine assembly and plasma operation. The management of tolerances allocated to part manufacture and assembly processes, as well as the control of potential deviations and early mitigation of non-compliances with the technical requirements, is a critical activity on the project life cycle. A 3D tolerance simulation analysis of ITER Tokamak machine has been developed based on 3DCS dedicated software. This integrated dimensional variation model is representative of Tokamak manufacturing functional tolerances and assembly processes, predicting accurate values for the amount of variation on critical areas. This paper describes the detailed methodology to implement and update the Tokamak Dimensional Variation Model. The model is managed at system level. The methodology phases are illustrated by its application to the Vacuum Vessel (VV), considering the status of maturity of VV dimensional variation model. The following topics are described in this paper: • Model description and constraints. • Model implementation workflow. • Management of input and output data. • Statistical analysis and risk assessment. The management of the integration studies based on

Mathematical modelling in solid mechanics

CERN Document Server

Sofonea, Mircea; Steigmann, David

2017-01-01

This book presents new research results in multidisciplinary fields of mathematical and numerical modelling in mechanics. The chapters treat the topics: mathematical modelling in solid, fluid and contact mechanics nonconvex variational analysis with emphasis to nonlinear solid and structural mechanics numerical modelling of problems with non-smooth constitutive laws, approximation of variational and hemivariational inequalities, numerical analysis of discrete schemes, numerical methods and the corresponding algorithms, applications to mechanical engineering numerical aspects of non-smooth mechanics, with emphasis on developing accurate and reliable computational tools mechanics of fibre-reinforced materials behaviour of elasto-plastic materials accounting for the microstructural defects definition of structural defects based on the differential geometry concepts or on the atomistic basis interaction between phase transformation and dislocations at nano-scale energetic arguments bifurcation and post-buckling a...

Forest anisotropy assessment by means of spatial variations analysis of PolSAR backscattering

Directory of Open Access Journals (Sweden)

A. V. Dmitriev

2017-06-01

Full Text Available The possibility to synthesize polarization response from earth covers at any desired combination of transmit and receive antenna polarizations is the significant advantage of polarimetric radar. It permits better identification of dominant scattering mechanisms especially when analyzing polarization signatures. These signatures depict more details of physical information from target backscattering in various polarization bases. However, polarization signatures cannot reveal spatial variations of the radar backscattering caused by volume heterogeneity of a target. This paper proposes a new approach for estimating volume target heterogeneity from polarimetric synthetic aperture radar (PolSAR images. The approach is based on the analysis of a novel type of polarization signature, which we call fractal polarization signature (FPS. This signature is a result of polarization synthesis of initial fully polarimetric data and subsequent fractal analysis of synthesized images. It is displayed as a 3D plot and can be produced for each point in an image. It is shown that FPS describes backscattering variations or image roughness at different states of polarization. Fully polarimetric data of SIR-C and ALOS PALSAR at ascending/descending orbits were used for testing the proposed approach. The azimuthal dependence of the radar backscattering variations is discovered when analyzing backscattering from a pine forest. It correlates with the results of a field survey of trees branch distribution.

Fixed point theory, variational analysis, and optimization

CERN Document Server

Al-Mezel, Saleh Abdullah R; Ansari, Qamrul Hasan

2015-01-01

""There is a real need for this book. It is useful for people who work in areas of nonlinear analysis, optimization theory, variational inequalities, and mathematical economics.""-Nan-Jing Huang, Sichuan University, Chengdu, People's Republic of China

Natural variation in germination responses of Arabidopsis to seasonal cues and their associated physiological mechanisms

Science.gov (United States)

Barua, Deepak; Butler, Colleen; Tisdale, Tracy E.; Donohue, Kathleen

2012-01-01

Background and Aims Despite the intense interest in phenological adaptation to environmental change, the fundamental character of natural variation in germination is almost entirely unknown. Specifically, it is not known whether different genotypes within a species are germination specialists to particular conditions, nor is it known what physiological mechanisms of germination regulation vary in natural populations and how they are associated with responses to particular environmental factors. Methods We used a set of recombinant inbred genotypes of Arabidopsis thaliana, in which linkage disequilibrium has been disrupted over seven generations, to test for genetic variation and covariation in germination responses to distinct environmental factors. We then examined physiological mechanisms associated with those responses, including seed-coat permeability and sensitivity to the phytohormones gibberellic acid (GA) and abscisic acid (ABA). Key Results Genetic variation for germination was environment-dependent, but no evidence for specialization of germination to different conditions was found. Hormonal sensitivities also exhibited significant genetic variation, but seed-coat properties did not. GA sensitivity was associated with germination responses to multiple environmental factors, but seed-coat permeability and ABA sensitivity were associated with specific germination responses, suggesting that an evolutionary change in GA sensitivity could affect germination in multiple environments, but that of ABA sensitivity may affect germination under more restricted conditions. Conclusions The physiological mechanisms of germination responses to specific environmental factors therefore can influence the ability to adapt to diverse seasonal environments encountered during colonization of new habitats or with future predicted climate change. PMID:22012958

Big Data Analysis of Human Genome Variations

KAUST Repository

Gojobori, Takashi

2016-01-25

Since the human genome draft sequence was in public for the first time in 2000, genomic analyses have been intensively extended to the population level. The following three international projects are good examples for large-scale studies of human genome variations: 1) HapMap Data (1,417 individuals) (http://hapmap.ncbi.nlm.nih.gov/downloads/genotypes/2010-08_phaseII+III/forward/), 2) HGDP (Human Genome Diversity Project) Data (940 individuals) (http://www.hagsc.org/hgdp/files.html), 3) 1000 genomes Data (2,504 individuals) http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20130502/ If we can integrate all three data into a single volume of data, we should be able to conduct a more detailed analysis of human genome variations for a total number of 4,861 individuals (= 1,417+940+2,504 individuals). In fact, we successfully integrated these three data sets by use of information on the reference human genome sequence, and we conducted the big data analysis. In particular, we constructed a phylogenetic tree of about 5,000 human individuals at the genome level. As a result, we were able to identify clusters of ethnic groups, with detectable admixture, that were not possible by an analysis of each of the three data sets. Here, we report the outcome of this kind of big data analyses and discuss evolutionary significance of human genomic variations. Note that the present study was conducted in collaboration with Katsuhiko Mineta and Kosuke Goto at KAUST.

A mechanism of midlatitude noontime foE long-term variations inferred from European observations

Science.gov (United States)

Mikhailov, A. V.; Perrone, L.; Nusinov, A. A.

2017-04-01

Manually scaled June noontime monthly median foE values at three European stations Rome, Juliusruh, and Slough/Chilton were used to understand the mechanism of foE long-term variations. The 11 year running mean smoothed foE manifests long-term (for some solar cycles) variations with the rising phase at the end of 1960-1985 and the falling phase after 1985. A close relationship (even in details) between (foEave)11y and (R12)11y variations with the correlation coefficient of 0.996 (absolutely significant according to Fisher F criterion) suggests that the Sun is the source of these (foEave)11y long-term variations. After removing solar activity long-term variations the residual (foEave)11y trend is very small ( 0.029% per decade) being absolutely insignificant. This means that all (foEave)11y variations are removed with one solar activity index, (R12)11y, i.e., this means that long-term variations are fully controlled by solar activity. Theory of midlatitude daytime E region tells us that long-term variations of solar EUV in two lines λ = 977 Å (CIII) and λ = 1025.7 Å (HLyβ) and X-ray radiation with λ foE long-term variations have a natural (not anthropogenic) origin related to long-term variations of solar activity. No peculiarities in relation with the last deep solar minimum in 2008-2009 have been revealed.

Genetic variation shapes protein networks mainly through non-transcriptional mechanisms.

Directory of Open Access Journals (Sweden)

Eric J Foss

2011-09-01

Full Text Available Networks of co-regulated transcripts in genetically diverse populations have been studied extensively, but little is known about the degree to which these networks cause similar co-variation at the protein level. We quantified 354 proteins in a genetically diverse population of yeast segregants, which allowed for the first time construction of a coherent protein co-variation matrix. We identified tightly co-regulated groups of 36 and 93 proteins that were made up predominantly of genes involved in ribosome biogenesis and amino acid metabolism, respectively. Even though the ribosomal genes were tightly co-regulated at both the protein and transcript levels, genetic regulation of proteins was entirely distinct from that of transcripts, and almost no genes in this network showed a significant correlation between protein and transcript levels. This result calls into question the widely held belief that in yeast, as opposed to higher eukaryotes, ribosomal protein levels are regulated primarily by regulating transcript levels. Furthermore, although genetic regulation of the amino acid network was more similar for proteins and transcripts, regression analysis demonstrated that even here, proteins vary predominantly as a result of non-transcriptional variation. We also found that cis regulation, which is common in the transcriptome, is rare at the level of the proteome. We conclude that most inter-individual variation in levels of these particular high abundance proteins in this genetically diverse population is not caused by variation of their underlying transcripts.

Functional Catastrophe Analysis of Collapse Mechanism for Shallow Tunnels with Considering Settlement

Directory of Open Access Journals (Sweden)

Rui Zhang

2016-01-01

Full Text Available Limit analysis is a practical and meaningful method to predict the stability of geomechanical properties. This work investigates the pore water effect on new collapse mechanisms and possible collapsing block shapes of shallow tunnels with considering the effects of surface settlement. The analysis is performed within the framework of upper bound theorem. Furthermore, the NL nonlinear failure criterion is used to examine the influence of different factors on the collapsing shape and the minimum supporting pressure in shallow tunnels. Analytical solutions derived by functional catastrophe theory for the two different shape curves which describe the distinct characteristics of falling blocks up and down the water level are obtained by virtual work equations under the variational principle. By considering that the mechanical properties of soil are not affected by the presence of underground water, the strength parameters in NL failure criterion can be taken to be the same under and above the water table. According to the numerical results in this work, the influences on the size of collapsing block different parameters have are presented in the tables and the upper bounds on the loads required to resist collapse are derived and illustrated in the form of supporting forces graphs that account for the variation of the embedded depth and other factors.

Introduction and application of the multiscale coefficient of variation analysis.

Science.gov (United States)

Abney, Drew H; Kello, Christopher T; Balasubramaniam, Ramesh

2017-10-01

Quantifying how patterns of behavior relate across multiple levels of measurement typically requires long time series for reliable parameter estimation. We describe a novel analysis that estimates patterns of variability across multiple scales of analysis suitable for time series of short duration. The multiscale coefficient of variation (MSCV) measures the distance between local coefficient of variation estimates within particular time windows and the overall coefficient of variation across all time samples. We first describe the MSCV analysis and provide an example analytical protocol with corresponding MATLAB implementation and code. Next, we present a simulation study testing the new analysis using time series generated by ARFIMA models that span white noise, short-term and long-term correlations. The MSCV analysis was observed to be sensitive to specific parameters of ARFIMA models varying in the type of temporal structure and time series length. We then apply the MSCV analysis to short time series of speech phrases and musical themes to show commonalities in multiscale structure. The simulation and application studies provide evidence that the MSCV analysis can discriminate between time series varying in multiscale structure and length.

Mechanical tolerance stackup and analysis

CERN Document Server

Fischer, Bryan R

2004-01-01

BackgroundDimensioning and TolerancingTolerance Format and Decimal PlacesConverting Plus/Minus Dimensions and Tolerances into Equal Bilaterally Toleranced DimensionsVariation and Sources of VariationTolerance AnalysisWorst-case Tolerance StackupsStatistical Tolerance StackupsGeometric Dimensioning and Tolerancing (GD&T)Converting Plus/Minus Tolerancing to Positional Tolerancing and Projected Tolerance ZonesDiametral and Radial Tolerance StackupsSpecifying Material Condition Modifiers and Their Effect on Tolerance Stackups The Tolerance Stackup SketchThe Tolerance Stackup Report FormTolerance S

Materials properties utilization in a cumulative mechanical damage function for LMFBR fuel pin failure analysis

International Nuclear Information System (INIS)

Jacobs, D.C.

1977-01-01

An overview is presented of one of the fuel-pin analysis techniques used in the CRBRP program, the cumulative mechanical damage function. This technique, as applied to LMFBR's, was developed along with the majority of models used to describe the mechanical properties and environmental behavior of the cladding (i.e., 20 percent cold-worked, 316 stainless steel). As it relates to fuel-pin analyses the Cumulative Mechanical Damage Function (CDF) continually monitors cladding integrity through steady state and transient operation; it is a time dependent function of temperature and stress which reflects the effects of both the prior mechanical history and the variations in mechanical properties caused by exposure to the reactor environment

Transcriptome analysis of the sea cucumber (Apostichopus japonicus) with variation in individual growth.

Science.gov (United States)

Gao, Lei; He, Chongbo; Bao, Xiangbo; Tian, Meilin; Ma, Zhen

2017-01-01

The sea cucumber (Apostichopus japonicus) is an economically important aquaculture species in China. However, the serious individual growth variation often caused financial losses to farmers and the genetic mechanisms are poorly understood. In the present study, the extensively analysis at the transcriptome level for individual growth variation in sea cucumber was carried out. A total of 118946 unigenes were assembled from 255861 transcripts, with N50 of 1700. Of all unigenes, about 23% were identified with at least one significant match to known databases. In all four pair of comparison, 1840 genes were found to be expressed differently. Global hypometabolism was found to be occurred in the slow growing population, based on which the hypothesis was raised that growth retardation in individual growth variation of sea cucumber is one type of dormancy which is used to be against to adverse circumstances. Besides, the pathways such as ECM-receptor interaction and focal adhesion were enriched in the maintenance of cell and tissue structure and communication. Further, 76645 SSRs, 765242 SNPs and 146886 ins-dels were detected in the current study providing an extensive set of data for future studies of genetic mapping and selective breeding. In summary, these results will provides deep insight into the molecular basis of individual growth variation in marine invertebrates, and be valuable for understanding the physiological differences of growth process.

Transcriptome analysis of the sea cucumber (Apostichopus japonicus with variation in individual growth.

Directory of Open Access Journals (Sweden)

Lei Gao

Full Text Available The sea cucumber (Apostichopus japonicus is an economically important aquaculture species in China. However, the serious individual growth variation often caused financial losses to farmers and the genetic mechanisms are poorly understood. In the present study, the extensively analysis at the transcriptome level for individual growth variation in sea cucumber was carried out. A total of 118946 unigenes were assembled from 255861 transcripts, with N50 of 1700. Of all unigenes, about 23% were identified with at least one significant match to known databases. In all four pair of comparison, 1840 genes were found to be expressed differently. Global hypometabolism was found to be occurred in the slow growing population, based on which the hypothesis was raised that growth retardation in individual growth variation of sea cucumber is one type of dormancy which is used to be against to adverse circumstances. Besides, the pathways such as ECM-receptor interaction and focal adhesion were enriched in the maintenance of cell and tissue structure and communication. Further, 76645 SSRs, 765242 SNPs and 146886 ins-dels were detected in the current study providing an extensive set of data for future studies of genetic mapping and selective breeding. In summary, these results will provides deep insight into the molecular basis of individual growth variation in marine invertebrates, and be valuable for understanding the physiological differences of growth process.

Variational principles for nonpotential operators

CERN Document Server

Filippov, V M

1989-01-01

This book develops a variational method for solving linear equations with B-symmetric and B-positive operators and generalizes the method to nonlinear equations with nonpotential operators. The author carries out a constructive extension of the variational method to "nonvariational" equations (including parabolic equations) in classes of functionals which differ from the Euler-Lagrange functionals. In this connection, some new functions spaces are considered. Intended for mathematicians working in the areas of functional analysis and differential equations, this book would also prove useful for researchers in other areas and students in advanced courses who use variational methods in solving linear and nonlinear boundary value problems in continuum mechanics and theoretical physics.

COMTA - a computer code for fuel mechanical and thermal analysis

International Nuclear Information System (INIS)

Basu, S.; Sawhney, S.S.; Anand, A.K.; Anantharaman, K.; Mehta, S.K.

1979-01-01

COMTA is a generalized computer code for integrity analysis of the free standing fuel cladding, with natural UO 2 or mixed oxide fuel pellets. Thermal and Mechanical analysis is done simultaneously for any power history of the fuel pin. For analysis, the fuel cladding is assumed to be axisymmetric and is subjected to axisymmetric load due to contact pressure, gas pressure, coolant pressure and thermal loads. Axial variation of load is neglected and creep and plasticity are assumed to occur at constant volume. The pellet is assumed to be made of concentric annuli. The fission gas release integral is dependent on the temperature and the power produced in each annulus. To calculate the temperature distribution in the fuel pin, the variation of bulk coolant temperature is given as an input to the code. Gap conductance is calculated at every time step, considering fuel densification, fuel relocation and gap closure, filler gas dilution by released fission gas, gap closure by expansion and irradiation swelling. Overall gap conductance is contributed by heat transfer due to the three modes; conduction convection and radiation as per modified Ross and Stoute model. Equilibrium equations, compatibility equations, stress strain relationships (including thermal strains and permanent strains due to creep and plasticity) are used to obtain triaxial stresses and strains. Thermal strain is assumed to be zero at hot zero power conditions. The boundary conditions are obtained for radial stresses at outside and inside surfaces by making these equal to coolant pressure and internal pressure respectively. A multi-mechanism creep model which accounts for thermal and irradiation creep is used to calculate the overall creep rate. Effective plastic strain is a function of effective stress and material constants. (orig.)

Variational principles of fluid mechanics and electromagnetism: imposition and neglect of the Lin constraint

International Nuclear Information System (INIS)

Allen, R.R. Jr.

1987-01-01

The Lin constraint has been utilized by a number of authors who have sought to develop Eulerian variational principles in both fluid mechanics and electromagnetics (or plasmadynamics). This dissertation first reviews the work of earlier authors concerning the development of variational principles in both the Eulerian and Lagrangian nomenclatures. In the process, it is shown whether or not the Euler-Lagrange equations that result from the variational principles are equivalent to the generally accepted equations of motion. In particular, it is shown in the case of several Eulerian variational principles that imposition of the Lin constraint results in Euler-Lagrange equations equivalent to the generally accepted equations of motion, whereas neglect of the Lin constraint results in restrictive Euler-Lagrange equations. In an effort to improve the physical motivation behind introduction of the Lin constraint, a new variational constraint is developed based on teh concept of surface forces within a fluid. Additionally, it is shown that a quantity often referred to as the canonical momentum of a charged fluid is not always a constant of the motion of the fluid; and it is demonstrated that there does not exist an unconstrained Eulerian variational principle giving rise to the generally accepted equations of motion for both a perfect fluid and a cold, electromagnetic fluid

Convergence analysis of variational and non-variational multigrid algorithms for the Laplace-Beltrami operator

KAUST Repository

Bonito, Andrea; Pasciak, Joseph E.

2012-01-01

is captured well enough by the coarsest grid. The main argument hinges on a perturbation analysis from an auxiliary variational algorithm defined directly on the smooth surface. In addition, the vanishing mean value constraint is imposed on each level, thereby

Estimating heat-to-heat variation in mechanical properties from a statistician's point of view

International Nuclear Information System (INIS)

Hebble, T.L.

1976-01-01

A statistical technique known as analysis of variance (ANOVA) is used to estimate the variance and standard deviation of differences among heats. The total variation of a collection of observations and how an ANOVA can be used to partition the total variation into its sources are discussed. Then, the ANOVA is adapted to published Japanese data indicating how to estimate heat-to-heat variation. Finally, numerical results are computed for several tensile and creep properties of Types 304 and 316 SS

Analysis of copy number variations in Holstein cows identify potential mechanisms contributing to differences in residual feed intake.

Science.gov (United States)

Hou, Yali; Bickhart, Derek M; Chung, Hoyoung; Hutchison, Jana L; Norman, H Duane; Connor, Erin E; Liu, George E

2012-11-01

Genomic structural variation is an important and abundant source of genetic and phenotypic variation. In this study, we performed an initial analysis of copy number variations (CNVs) using BovineHD SNP genotyping data from 147 Holstein cows identified as having high or low feed efficiency as estimated by residual feed intake (RFI). We detected 443 candidate CNV regions (CNVRs) that represent 18.4 Mb (0.6 %) of the genome. To investigate the functional impacts of CNVs, we created two groups of 30 individual animals with extremely low or high estimated breeding values (EBVs) for RFI, and referred to these groups as low intake (LI; more efficient) or high intake (HI; less efficient), respectively. We identified 240 (~9.0 Mb) and 274 (~10.2 Mb) CNVRs from LI and HI groups, respectively. Approximately 30-40 % of the CNVRs were specific to the LI group or HI group of animals. The 240 LI CNVRs overlapped with 137 Ensembl genes. Network analyses indicated that the LI-specific genes were predominantly enriched for those functioning in the inflammatory response and immunity. By contrast, the 274 HI CNVRs contained 177 Ensembl genes. Network analyses indicated that the HI-specific genes were particularly involved in the cell cycle, and organ and bone development. These results relate CNVs to two key variables, namely immune response and organ and bone development. The data indicate that greater feed efficiency relates more closely to immune response, whereas cattle with reduced feed efficiency may have a greater capacity for organ and bone development.

Time variations in the mechanical characteristics of local crustal segments according to seismic observations

Science.gov (United States)

Kocharyan, G. G.; Gamburtseva, N. G.; Sanina, I. A.; Danilova, T. V.; Nesterkina, M. A.; Gorbunova, E. M.; Ivanchenko, G. N.

2011-04-01

The results of the seismic observations made with two different experimental setups are presented. In the first case, the signals produced by underground nuclear explosions at the Semipalatinsk Test Site were measured on a linear profile, which allowed one to definitely outline the areas where the mechanical properties of rocks experienced considerable time variations. In the second case, the waves excited by the open-pit mine blasts recorded at a small-aperture seismic array at the Mikhnevo Geophysical Station (Institute of Geosphere Dynamics, Russian Academy of Sciences) on the East European Platform favored the estimation of variations in the integral characteristics of the seismic path. Measurements in aseismic regions characterized by diverse geological structure and different tectonic conditions revealed similar effects of the strong dependency of seismic parameters on the time of explosions. Here, the variations experienced by the maximum amplitudes of oscillations and irrelevant to seasonal changes or local conditions reached a factor of two. The generic periods of these variations including the distinct annual rhythm are probably the fragments of a lower-frequency process. The obtained results suggest that these variations are due to changes in the stressstrain state of active fault zones, which, in turn, can be associated with the macroscale motion of large blocks triggered by tidal strains, tectonic forces and, possibly, variations in the rate of the Earth's rotation.

Variations mechanism in entropy of wave height field and its relation with thermodynamic entropy

Institute of Scientific and Technical Information of China (English)

无

2006-01-01

This paper gives a brief description of annual period and seasonal variation in the wave height field entropy in the northeastern Pacific. A calculation of the quantity of the, received by lithosphere systems in the northern hemisphere is introduced. The wave heat field entropy is compared with the difference in the quantity of the sun's radiation heat. Analysis on the transfer method, period and lag of this seasonal variation led to the conclusion that the annual period and seasonal variation in the entropy of the wave height field in the Northwestern Pacific is due to the seasonal variation of the sun's radiation heat. Furthermore, the inconsistency between thermodynamic entropy and information entropy was studied.

Uncertainty and sensitivity analysis of electro-mechanical impedance based SHM system

International Nuclear Information System (INIS)

Rosiek, M; Martowicz, A; Uhl, T

2010-01-01

The paper deals with the application of uncertainty and sensitivity analysis performed for FE simulations for electro-mechanical impedance based SHM system. The measurement of electro-mechanical impedance allows to follow changes of mechanical properties of monitored construction. Therefore it can be effectively applied to conclude about presence of damage. Coupled FE simulations have been carried out for simultaneous consideration of both structural dynamics and piezoelectric properties of a simple beam with bonded transducer. Several indexes have been used to assess the damage growth. In the paper the results obtained with both deterministic and stochastic simulations are shown and discussed. First, the relationship between size of introduced damage and its indexes has been studied. Second, ranges of variation of selected model properties have been assumed to find relationships between them and damage indexes. The most influential parameters have been found. Finally, the overall propagation of considered uncertainty has been assessed and related histograms plotted to discuss effectiveness and robustness of tested damage indexes based on the measurement of electro-mechanical impedance.

Variation in plasma calcium analysis in primary care in Sweden - a multilevel analysis

Directory of Open Access Journals (Sweden)

Eggertsen Robert

2010-05-01

Full Text Available Abstract Background Primary hyperparathyroidism (pHPT is a common disease that often remains undetected and causes severe disturbance especially in postmenopausal women. Therefore, national recommendations promoting early pHPT detection by plasma calcium (P-Ca have been issued in Sweden. In this study we aimed to investigate variation of P-Ca analysis between physicians and health care centres (HCCs in primary care in county of Skaraborg, Sweden. Methods In this cross sectional study of patients' records during 2005 we analysed records from 154 629 patients attending 457 physicians at 24 HCCs. We used multilevel logistic regression analysis (MLRA and adjusted for patient, physician and HCC characteristics. Differences were expressed as median odds ratio (MOR. Results There was a substantial variation in number of P-Ca analyses between both HCCs (MORHCC 1.65 [1.44-2.07] and physicians (MORphysician 1.95 [1.85-2.08]. The odds for a P-Ca analysis were lower for male patients (OR 0.80 [0.77-0.83] and increased with the number of diagnoses (OR 25.8 [23.5-28.5]. Sex of the physician had no influence on P-Ca test ordering (OR 0.93 [0.78-1.09]. Physicians under education ordered most P-Ca analyses (OR 1.69 [1.35-2.24] and locum least (OR 0.73 [0.57-0.94]. More of the variance was attributed to the physician level than the HCC level. Different mix of patients did not explain this variance between physicians. Theoretically, if a patient were able to change both GP and HCC, the odds of a P-Ca analysis would in median increase by 2.45. Including characteristics of the patients, physicians and HCCs in the MLRA model did not explain the variance. Conclusions The physician level was more important than the HCC level for the variation in P-Ca analysis, but further exploration of unidentified contextual factors is crucial for future monitoring of practice variation.

Variational boundary conditions based on the Nitsche method for fitted and unfitted isogeometric discretizations of the mechanically coupled Cahn-Hilliard equation

Science.gov (United States)

Zhao, Ying; Schillinger, Dominik; Xu, Bai-Xiang

2017-07-01

The primal variational formulation of the fourth-order Cahn-Hilliard equation requires C1-continuous finite element discretizations, e.g., in the context of isogeometric analysis. In this paper, we explore the variational imposition of essential boundary conditions that arise from the thermodynamic derivation of the Cahn-Hilliard equation in primal variables. Our formulation is based on the symmetric variant of Nitsche's method, does not introduce additional degrees of freedom and is shown to be variationally consistent. In contrast to strong enforcement, the new boundary condition formulation can be naturally applied to any mapped isogeometric parametrization of any polynomial degree. In addition, it preserves full accuracy, including higher-order rates of convergence, which we illustrate for boundary-fitted discretizations of several benchmark tests in one, two and three dimensions. Unfitted Cartesian B-spline meshes constitute an effective alternative to boundary-fitted isogeometric parametrizations for constructing C1-continuous discretizations, in particular for complex geometries. We combine our variational boundary condition formulation with unfitted Cartesian B-spline meshes and the finite cell method to simulate chemical phase segregation in a composite electrode. This example, involving coupling of chemical fields with mechanical stresses on complex domains and coupling of different materials across complex interfaces, demonstrates the flexibility of variational boundary conditions in the context of higher-order unfitted isogeometric discretizations.

Parameterization of mechanical process operations taking into consideration a coefficient of variation and tool life

Directory of Open Access Journals (Sweden)

A. S. Sgibnev

2014-01-01

Full Text Available This article describes the results of studies on methods for improving the reliability of mechanical process operations of hard-to-machine materials. In serial production hard-to-machine materials processing should be characterized by high reliability, in particular, low dispersion tool life.The aim is to analyze the reliability of a part of the technological system, i.e. the tool for mechanical processing of hard-to-machine materials.The paper analyzes the effect of various input parameters of the technological system (processed material, tool material, technological environment, operating parameters (processing modes on the reliability of the technological system. A feature of this work is to obtain quantitative characteristics of reliability for processing just the hard-to-machine materials. It is an important problem-solving because of the high cost of both the materials and the tool.For various tool, processed materials, and process operation conditions the experiments have been conducted, and, when machining, the tool life has been recorded, thus allowing to obtain the coefficient of variation for high production run of tool. Comparison of coefficients of variation resulted in offering the tool material, process environment, and operation conditions to improve the reliability of the technological system for the specific brands of corrosion resistant steels and alloys and tungsten.It is shown that the tool material and technological environment have the biggest influence on the tool life period T and its coefficient of variation varT. It is noted that materials with a complicated composition have the higher life volatility as compared with the resistance simple alloys. It is shown that an increasing cutting speed is reduced after a certain value of the coefficient of variation due to entrainment outgrowth formed on the cutting edge of the tool.The results obtained allow machining production engineers at the enterprises of serial

Computational contact and impact mechanics fundamentals of modeling interfacial phenomena in nonlinear finite element analysis

CERN Document Server

Laursen, Tod A

2003-01-01

This book comprehensively treats the formulation and finite element approximation of contact and impact problems in nonlinear mechanics. Intended for students, researchers and practitioners interested in numerical solid and structural analysis, as well as for engineers and scientists dealing with technologies in which tribological response must be characterized, the book includes an introductory but detailed overview of nonlinear finite element formulations before dealing with contact and impact specifically. Topics encompassed include the continuum mechanics, mathematical structure, variational framework, and finite element implementations associated with contact/impact interaction. Additionally, important and currently emerging research topics in computational contact mechanics are introduced, encompassing such topics as tribological complexity, conservative treatment of inelastic impact interaction, and novel spatial discretization strategies.

Pan-Genome Analysis Links the Hereditary Variation of Leptospirillum ferriphilum With Its Evolutionary Adaptation

Directory of Open Access Journals (Sweden)

Xian Zhang

2018-03-01

Full Text Available Niche adaptation has long been recognized to drive intra-species differentiation and speciation, yet knowledge about its relatedness with hereditary variation of microbial genomes is relatively limited. Using Leptospirillum ferriphilum species as a case study, we present a detailed analysis of genomic features of five recognized strains. Genome-to-genome distance calculation preliminarily determined the roles of spatial distance and environmental heterogeneity that potentially contribute to intra-species variation within L. ferriphilum species at the genome level. Mathematical models were further constructed to extrapolate the expansion of L. ferriphilum genomes (an ‘open’ pan-genome, indicating the emergence of novel genes with new sequenced genomes. The identification of diverse mobile genetic elements (MGEs (such as transposases, integrases, and phage-associated genes revealed the prevalence of horizontal gene transfer events, which is an important evolutionary mechanism that provides avenues for the recruitment of novel functionalities and further for the genetic divergence of microbial genomes. Comprehensive analysis also demonstrated that the genome reduction by gene loss in a broad sense might contribute to the observed diversification. We thus inferred a plausible explanation to address this observation: the community-dependent adaptation that potentially economizes the limiting resources of the entire community. Now that the introduction of new genes is accompanied by a parallel abandonment of some other ones, our results provide snapshots on the biological fitness cost of environmental adaptation within the L. ferriphilum genomes. In short, our genome-wide analyses bridge the relation between genetic variation of L. ferriphilum with its evolutionary adaptation.

Thermo-mechanical assessment of full SiC/SiC composite cladding for LWR applications with sensitivity analysis

Science.gov (United States)

Singh, Gyanender; Terrani, Kurt; Katoh, Yutai

2018-02-01

SiC/SiC composites are considered among leading candidates for accident tolerant fuel cladding in light water reactors. However, when SiC-based materials are exposed to neutron irradiation, they experience significant changes in dimensions and physical properties. Under a large heat flux application (i.e. fuel cladding), the non-uniform changes in the dimensions and physical properties will lead to build-up of stresses in the structure over the course of time. To ensure reliable and safe operation of such a structure it is important to assess its thermo-mechanical performance under in-reactor conditions of irradiation and elevated temperature. In this work, the foundation for 3D thermo-mechanical analysis of SiC/SiC cladding is put in place and a set of analyses with simplified boundary conditions has been performed. The analyses were carried out with two different codes that were benchmarked against one another and prior results in the literature. A constitutive model is constructed and solved numerically to predict the stress distribution and variation in the cladding under normal operating conditions. The dependence of dimensions and physical properties variation with irradiation and temperature has been incorporated. These robust models may now be modified to take into account the axial and circumferential variation in neutron and heat flux to fully account for 3D effects. The results from the simple analyses show the development of high tensile stresses especially in the circumferential and axial directions at the inner region of the cladding. Based on the results obtained, design guidelines are recommended. For lack of certainty in or tailor-ability for the physical and mechanical properties of SiC/SiC composite material a sensitivity analysis is conducted. The analysis results establish a precedence order of the properties based on the extent to which these properties influence the temperature and the stresses.

Kinematic analysis of in situ measurement during chemical mechanical planarization process

Energy Technology Data Exchange (ETDEWEB)

Li, Hongkai; Wang, Tongqing; Zhao, Qian; Meng, Yonggang; Lu, Xinchun, E-mail: xclu@tsinghua.edu.cn [State Key Laboratory of Tribology, Tsinghua University, Beijing 100084 (China)

2015-10-15

Chemical mechanical planarization (CMP) is the most widely used planarization technique in semiconductor manufacturing presently. With the aid of in situ measurement technology, CMP tools can achieve good performance and stable productivity. However, the in situ measurement has remained unexplored from a kinematic standpoint. The available related resources for the kinematic analysis are very limited due to the complexity and technical secret. In this paper, a comprehensive kinematic analysis of in situ measurement is provided, including the analysis model, the measurement trajectory, and the measurement time of each zone of wafer surface during the practical CMP process. In addition, a lot of numerical calculations are performed to study the influences of main parameters on the measurement trajectory and the measurement velocity variation of the probe during the measurement process. All the efforts are expected to improve the in situ measurement system and promote the advancement in CMP control system.

Analysis of indel variations in the human disease-associated genes ...

Indian Academy of Sciences (India)

Keywords. insertion–deletion variations; haematological disease; tumours; human genetics. Journal of Genetics ... domly selected healthy Korean individuals using a blood genomic DNA ... Bioinformatics annotation and 3-D protein structure analysis. In this study ..... 2009 A genome-wide meta-analysis identifies. Journal of ...

Mechanics, analysis and geometry 200 years after Lagrange

CERN Document Server

1991-01-01

Providing a logically balanced and authoritative account of the different branches and problems of mathematical physics that Lagrange studied and developed, this volume presents up-to-date developments in differential goemetry, dynamical systems, the calculus of variations, and celestial and analytical mechanics.

The Importance of ncRNAs as Epigenetic Mechanisms in Phenotypic Variation and Organic Evolution

Directory of Open Access Journals (Sweden)

Daniel Frías-Lasserre

2017-12-01

Full Text Available Neo-Darwinian explanations of organic evolution have settled on mutation as the principal factor in producing evolutionary novelty. Mechanistic characterizations have been also biased by the classic dogma of molecular biology, where only proteins regulate gene expression. This together with the rearrangement of genetic information, in terms of genes and chromosomes, was considered the cornerstone of evolution at the level of natural populations. This predominant view excluded both alternative explanations and phenomenologies that did not fit its paradigm. With the discovery of non-coding RNAs (ncRNAs and their role in the control of genetic expression, new mechanisms arose providing heuristic power to complementary explanations to evolutionary processes overwhelmed by mainstream genocentric views. Viruses, epimutation, paramutation, splicing, and RNA editing have been revealed as paramount functions in genetic variations, phenotypic plasticity, and diversity. This article discusses how current epigenetic advances on ncRNAs have changed the vision of the mechanisms that generate variation, how organism-environment interaction can no longer be underestimated as a driver of organic evolution, and how it is now part of the transgenerational inheritance and evolution of species.

Computational analysis of sequence selection mechanisms.

Science.gov (United States)

Meyerguz, Leonid; Grasso, Catherine; Kleinberg, Jon; Elber, Ron

2004-04-01

Mechanisms leading to gene variations are responsible for the diversity of species and are important components of the theory of evolution. One constraint on gene evolution is that of protein foldability; the three-dimensional shapes of proteins must be thermodynamically stable. We explore the impact of this constraint and calculate properties of foldable sequences using 3660 structures from the Protein Data Bank. We seek a selection function that receives sequences as input, and outputs survival probability based on sequence fitness to structure. We compute the number of sequences that match a particular protein structure with energy lower than the native sequence, the density of the number of sequences, the entropy, and the "selection" temperature. The mechanism of structure selection for sequences longer than 200 amino acids is approximately universal. For shorter sequences, it is not. We speculate on concrete evolutionary mechanisms that show this behavior.

Three dimensional analysis of cosmic ray intensity variation

International Nuclear Information System (INIS)

Yasue, Shin-ichi; Mori, Satoru; Nagashima, Kazuo.

1974-01-01

Three dimensional analysis of cosmic ray anisotropy and its time variation was performed. This paper describes the analysis of the Forbush decrease in Jan. 1968 to investigate by comparing the direction of the magnetic field in interplanetary space and the direction of the reference axis for cosmic ray anisotropy. New anisotropy becomes dominant at the time of Forbush decrease because the anisotropy of cosmic ray in calm state is wiped out. Such anisotropy produces intensity variation in neutron monitors on the ground. The characteristic parameters of three dimensional anisotropy can be determined from theoretical value and observed intensity. Analyzed data were taken for 6 days from Jan. 25 to Jan. 30, 1968, at Deep River. The decrease of intensity at Deep River was seen for several hours from 11 o'clock (UT), Jan. 26, just before The Forbush decrease. This may be due to the loss cone. The Forbush decrease began at 19 o'clock, Jan. 26, and the main phase continued to 5 o'clock in the next morning. The spectrum of variation was Psup(-0.5). The time variations of the magnetic field in interplanetary space and the reference axis of cosmic ray anisotropy are shown for 15 hours. The average directions of both are almost in coincidence. The spatial distribution of cosmic ray near the earth may be expressed by the superposition of axial symmetrical distribution along a reference axis and its push-out to the direction of 12 o'clock. It is considered that the direction of magnetic force line and the velocity of solar wind correspond to the direction of the reference axis and the magnitude of anisotropy in the direction of 12 o'clock, respectively. (Kato, T.)

Towards the mechanical characterization of abdominal wall by inverse analysis.

Science.gov (United States)

Simón-Allué, R; Calvo, B; Oberai, A A; Barbone, P E

2017-02-01

The aim of this study is to characterize the passive mechanical behaviour of abdominal wall in vivo in an animal model using only external cameras and numerical analysis. The main objective lies in defining a methodology that provides in vivo information of a specific patient without altering mechanical properties. It is demonstrated in the mechanical study of abdomen for hernia purposes. Mechanical tests consisted on pneumoperitoneum tests performed on New Zealand rabbits, where inner pressure was varied from 0mmHg to 12mmHg. Changes in the external abdominal surface were recorded and several points were tracked. Based on their coordinates we reconstructed a 3D finite element model of the abdominal wall, considering an incompressible hyperelastic material model defined by two parameters. The spatial distributions of these parameters (shear modulus and non linear parameter) were calculated by inverse analysis, using two different types of regularization: Total Variation Diminishing (TVD) and Tikhonov (H 1 ). After solving the inverse problem, the distribution of the material parameters were obtained along the abdominal surface. Accuracy of the results was evaluated for the last level of pressure. Results revealed a higher value of the shear modulus in a wide stripe along the craneo-caudal direction, associated with the presence of linea alba in conjunction with fascias and rectus abdominis. Non linear parameter distribution was smoother and the location of higher values varied with the regularization type. Both regularizations proved to yield in an accurate predicted displacement field, but H 1 obtained a smoother material parameter distribution while TVD included some discontinuities. The methodology here presented was able to characterize in vivo the passive non linear mechanical response of the abdominal wall. Copyright © 2016 Elsevier Ltd. All rights reserved.

Potential Mechanisms Driving Population Variation in Spatial Memory and the Hippocampus in Food-caching Chickadees.

Science.gov (United States)

Croston, Rebecca; Branch, Carrie L; Kozlovsky, Dovid Y; Roth, Timothy C; LaDage, Lara D; Freas, Cody A; Pravosudov, Vladimir V

2015-09-01

Harsh environments and severe winters have been hypothesized to favor improvement of the cognitive abilities necessary for successful foraging. Geographic variation in winter climate, then, is likely associated with differences in selection pressures on cognitive ability, which could lead to evolutionary changes in cognition and its neural mechanisms, assuming that variation in these traits is heritable. Here, we focus on two species of food-caching chickadees (genus Poecile), which rely on stored food for survival over winter and require the use of spatial memory to recover their stores. These species also exhibit extensive climate-related population level variation in spatial memory and the hippocampus, including volume, the total number and size of neurons, and adults' rates of neurogenesis. Such variation could be driven by several mechanisms within the context of natural selection, including independent, population-specific selection (local adaptation), environment experience-based plasticity, developmental differences, and/or epigenetic differences. Extensive data on cognition, brain morphology, and behavior in multiple populations of these two species of chickadees along longitudinal, latitudinal, and elevational gradients in winter climate are most consistent with the hypothesis that natural selection drives the evolution of local adaptations associated with spatial memory differences among populations. Conversely, there is little support for the hypotheses that environment-induced plasticity or developmental differences are the main causes of population differences across climatic gradients. Available data on epigenetic modifications of memory ability are also inconsistent with the observed patterns of population variation, with birds living in more stressful and harsher environments having better spatial memory associated with a larger hippocampus and a larger number of hippocampal neurons. Overall, the existing data are most consistent with the

Analysis of Price Variation and Market Integration of Prosopis ...

African Journals Online (AJOL)

Analysis of Price Variation and Market Integration of Prosopis Africana (guill. ... select five markets based on the presence of traders selling the commodity in the markets ... T- test result showed that Prosopis africana seed trade is profitable and ...

Stability Analysis and Variational Integrator for Real-Time Formation Based on Potential Field

Directory of Open Access Journals (Sweden)

Shengqing Yang

2014-01-01

Full Text Available This paper investigates a framework of real-time formation of autonomous vehicles by using potential field and variational integrator. Real-time formation requires vehicles to have coordinated motion and efficient computation. Interactions described by potential field can meet the former requirement which results in a nonlinear system. Stability analysis of such nonlinear system is difficult. Our methodology of stability analysis is discussed in error dynamic system. Transformation of coordinates from inertial frame to body frame can help the stability analysis focus on the structure instead of particular coordinates. Then, the Jacobian of reduced system can be calculated. It can be proved that the formation is stable at the equilibrium point of error dynamic system with the effect of damping force. For consideration of calculation, variational integrator is introduced. It is equivalent to solving algebraic equations. Forced Euler-Lagrange equation in discrete expression is used to construct a forced variational integrator for vehicles in potential field and obstacle environment. By applying forced variational integrator on computation of vehicles' motion, real-time formation of vehicles in obstacle environment can be implemented. Algorithm based on forced variational integrator is designed for a leader-follower formation.

Analysis on Precipitation Variation in Anyang and Nanyang in Recent 57 Years

Institute of Scientific and Technical Information of China (English)

无

2011-01-01

[Objective] The aim was to analyze precipitation variation in Anyang and Nanyang in recent 57 years. [Method] Based on the data of annual precipitation in Anyang and Nanyang from 1953 to 2009, the changes of precipitation in Anyang and Nanyang were compared by means of mathematical statistics, regression analysis and wavelet analysis. [Result] In recent 57 years, annual precipitation in Anyang and Nanyang showed decrease trend, especially Anyang with obvious decrease trend; from seasonal variation, average ...

Calculus of variations

CERN Document Server

Elsgolc, L E; Stark, M

1961-01-01

Calculus of Variations aims to provide an understanding of the basic notions and standard methods of the calculus of variations, including the direct methods of solution of the variational problems. The wide variety of applications of variational methods to different fields of mechanics and technology has made it essential for engineers to learn the fundamentals of the calculus of variations. The book begins with a discussion of the method of variation in problems with fixed boundaries. Subsequent chapters cover variational problems with movable boundaries and some other problems; sufficiency

Elliptic Fourier Analysis of body shape variation of Hippocampus spp. (seahorse in Danajon Bank, Philippines

Directory of Open Access Journals (Sweden)

S. R. M. Tabugo-Rico

2017-12-01

Full Text Available Seahorses inhabit various ecosystems hence, had become a flagship species of the marine environment. The Philippines as a hot spot of biodiversity in Asia holds a number of species of seahorses. This serve as an exploratory study to describe body shape variation of selected common seahorse species: Hippocampus comes, Hippocampus histrix, Hippocampus spinosissimus and Hippocampus kuda from Danajon bank using Elliptic Fourier Analysis. The method was done to test whether significant yet subtle differences in body shape variation can be species-specific, habitat-influenced and provide evidence of sexual dimorphism. It is hypothesized that phenotypic divergence may provide evidence for genetic differentiation or mere adaptations to habitat variation. Results show significant considerable differences in the body shapes of the five populations based on the canonical variate analysis (CVA and multivariate analysis of variance (MANOVA with significant p values. Populations were found to be distinct from each other suggesting that body shape variation is species-specific, habitat-influenced and provided evidence for sexual dimorphism. Results of discriminant analysis show further support for species specific traits and sexual dimorphism. This study shows the application of the method of geometric morphometrics specifically elliptic fourier analysis in describing subtle body shape variation of selected Hippocampus species.

Thermo-mechanically coupled fracture analysis of shape memory alloys using the extended finite element method

Science.gov (United States)

Hatefi Ardakani, S.; Ahmadian, H.; Mohammadi, S.

2015-04-01

In this paper, the extended finite element method is used for fracture analysis of shape memory alloys for both cases of super elastic and shape memory effects. Heat generation during the forward and reverse phase transformations can lead to temperature variation in the material because of strong thermo-mechanical coupling, which significantly influences the SMA mechanical behavior. First, the stationary crack mode is studied and the effects of loading rate on material behavior in the crack tip are examined. Then, the crack propagation analysis is performed in the presence of an initial crack by adopting a weighted averaging criterion, where the direction of crack propagation is determined by weighted averaging of effective stresses at all the integration points in the vicinity of the crack tip. Finally, several numerical examples are analyzed and the obtained results are compared with the available reference results.

Towards Structural Analysis of Audio Recordings in the Presence of Musical Variations

Directory of Open Access Journals (Sweden)

Müller Meinard

2007-01-01

Full Text Available One major goal of structural analysis of an audio recording is to automatically extract the repetitive structure or, more generally, the musical form of the underlying piece of music. Recent approaches to this problem work well for music, where the repetitions largely agree with respect to instrumentation and tempo, as is typically the case for popular music. For other classes of music such as Western classical music, however, musically similar audio segments may exhibit significant variations in parameters such as dynamics, timbre, execution of note groups, modulation, articulation, and tempo progression. In this paper, we propose a robust and efficient algorithm for audio structure analysis, which allows to identify musically similar segments even in the presence of large variations in these parameters. To account for such variations, our main idea is to incorporate invariance at various levels simultaneously: we design a new type of statistical features to absorb microvariations, introduce an enhanced local distance measure to account for local variations, and describe a new strategy for structure extraction that can cope with the global variations. Our experimental results with classical and popular music show that our algorithm performs successfully even in the presence of significant musical variations.

Consistency of feed efficiency ranking and mechanisms associated with inter-animal variation among growing calves.

Science.gov (United States)

Asher, A; Shabtay, A; Cohen-Zinder, M; Aharoni, Y; Miron, J; Agmon, R; Halachmi, I; Orlov, A; Haim, A; Tedeschi, L O; Carstens, G E; Johnson, K A; Brosh, A

2018-04-03

This study investigated the possible mechanisms for explaining interanimal variation in efficiency of feed utilization in intact male Holstein calves. Additionally, we examined whether the feed efficiency (FE) ranking of calves (n = 26) changed due to age and/or diet quality. Calves were evaluated during three periods (P1, P2, and P3) while fed a high-quality diet (calculated mobilizable energy [ME] of 11.8 MJ/kg DM) during P1 and P3, and a low-quality diet (calculated ME of 7.7 MJ/kg DM) during P2. The study periods were 84, 119, and 127 d, respectively. Initial ages of the calves in P1, P2, and P3 were 7, 11, and 15 mo, respectively, and initial body weight (BW) were 245, 367, and 458 kg, respectively. Individual dry matter intake (DMI), average daily gain (ADG), diet digestibility, and heat production (HP) were measured in all periods. The measured FE indexes were: residual feed intake (RFI), the gain-to-feed ratio (G:F), residual gain (RG), residual gain and intake (RIG), the ratio of HP-to-ME intake (HP/MEI), and residual heat production (RHP). For statistical analysis, animals' performance data in each period, were ranked by RFI, and categorized into high-, medium-, and low-RFI groups (H-RFI, M-RFI, and L-RFI). RFI was not correlated with in vivo digestibility, age, BW, BCS, or ADG in all three periods. The L-RFI group had lowest DMI, MEI, HP, retained energy (RE), and RE/ADG. Chemical analysis of the longissimus dorsi muscle shows that the L-RFI group had a higher percentage of protein and a lower percentage of fat compared to the H-RFI group. We suggested that the main mechanism separating L- from H-RFI calves is the protein-to-fat ratio in the deposited tissues. When efficiency was related to kg/day (DMI and ADG) and not to daily retained energy, the selected efficient L-RFI calves deposited more protein and less fat per daily gain than less efficient H-RFI calves. However, when the significant greater heat increment and maintenance energy requirement of

Variation tolerant SoC design

Science.gov (United States)

Kozhikkottu, Vivek J.

The scaling of integrated circuits into the nanometer regime has led to variations emerging as a primary concern for designers of integrated circuits. Variations are an inevitable consequence of the semiconductor manufacturing process, and also arise due to the side-effects of operation of integrated circuits (voltage, temperature, and aging). Conventional design approaches, which are based on design corners or worst-case scenarios, leave designers with an undesirable choice between the considerable overheads associated with over-design and significantly reduced manufacturing yield. Techniques for variation-tolerant design at the logic, circuit and layout levels of the design process have been developed and are in commercial use. However, with the incessant increase in variations due to technology scaling and design trends such as near-threshold computing, these techniques are no longer sufficient to contain the effects of variations, and there is a need to address variations at all stages of design. This thesis addresses the problem of variation-tolerant design at the earliest stages of the design process, where the system-level design decisions that are made can have a very significant impact. There are two key aspects to making system-level design variation-aware. First, analysis techniques must be developed to project the impact of variations on system-level metrics such as application performance and energy. Second, variation-tolerant design techniques need to be developed to absorb the residual impact of variations (that cannot be contained through lower-level techniques). In this thesis, we address both these facets by developing robust and scalable variation-aware analysis and variation mitigation techniques at the system level. The first contribution of this thesis is a variation-aware system-level performance analysis framework. We address the key challenge of translating the per-component clock frequency distributions into a system-level application

The Effect of Geographic Units of Analysis on Measuring Geographic Variation in Medical Services Utilization

Directory of Open Access Journals (Sweden)

Agnus M. Kim

2016-07-01

Full Text Available Objectives: We aimed to evaluate the effect of geographic units of analysis on measuring geographic variation in medical services utilization. For this purpose, we compared geographic variations in the rates of eight major procedures in administrative units (districts and new areal units organized based on the actual health care use of the population in Korea. Methods: To compare geographic variation in geographic units of analysis, we calculated the age–sex standardized rates of eight major procedures (coronary artery bypass graft surgery, percutaneous transluminal coronary angioplasty, surgery after hip fracture, knee-replacement surgery, caesarean section, hysterectomy, computed tomography scan, and magnetic resonance imaging scan from the National Health Insurance database in Korea for the 2013 period. Using the coefficient of variation, the extremal quotient, and the systematic component of variation, we measured geographic variation for these eight procedures in districts and new areal units. Results: Compared with districts, new areal units showed a reduction in geographic variation. Extremal quotients and inter-decile ratios for the eight procedures were lower in new areal units. While the coefficient of variation was lower for most procedures in new areal units, the pattern of change of the systematic component of variation between districts and new areal units differed among procedures. Conclusions: Geographic variation in medical service utilization could vary according to the geographic unit of analysis. To determine how geographic characteristics such as population size and number of geographic units affect geographic variation, further studies are needed.

Systems genetics analysis of pharmacogenomics variation during antidepressant treatment

DEFF Research Database (Denmark)

Madsen, Majbritt Busk; Kogelman, L J A; Kadarmideen, H N

2016-01-01

Selective serotonin reuptake inhibitors (SSRIs) are the most widely used antidepressants, but the efficacy of the treatment varies significantly among individuals. It is believed that complex genetic mechanisms play a part in this variation. We have used a network based approach to unravel the in...... genes involved in calcium homeostasis. In conclusion, we suggest a difference in genetic interaction networks between initial and subsequent SSRI response.The Pharmacogenomics Journal advance online publication, 18 October 2016; doi:10.1038/tpj.2016.68....

Regional variation in the mechanical properties of the vertebral column during lateral bending in Morone saxatilis.

Science.gov (United States)

Nowroozi, B N; Brainerd, E L

2012-10-07

Unlike mammalian, disc-shaped intervertebral joints (IVJs), the IVJs in fishes are biconid structures, filled with fluid and thought to act as hydrostatic hinge joints during swimming. However, it remains unclear which IVJ structures are dominant in mechanical resistance to forces in fishes, and whether variation in these tissues might impact the function of the vertebral column along its length. Here, we measured the dynamic mechanical behaviour of IVJs from striped bass, Morone saxatilis. During lateral bending, angular stiffness was significantly lower in the caudal and cervical regions, relative to the abdominal region. The neutral zone, defined as the range of motion (ROM) at bending moments less than 0.001 Nm, was longer in the caudal relative to the abdominal IVJs. Hysteresis was 30-40% in all regions, suggesting that IVJs may play a role in energy dissipation during swimming. Cutting the vertical septum had no statistically significant effect, but cutting the encapsulating tissues caused a sharp decline in angular stiffness and a substantial increase in ROM and hysteresis. We conclude that stiffness decreases and ROM increases from cranial to caudal in striped bass, and that the encapsulating tissues play a prominent role in mechanical variation along the length of the vertebral column.

Effects of the Variation in Brain Tissue Mechanical Properties on the Intracranial Response of a 6-Year-Old Child.

Science.gov (United States)

Cui, Shihai; Li, Haiyan; Li, Xiangnan; Ruan, Jesse

2015-01-01

Brain tissue mechanical properties are of importance to investigate child head injury using finite element (FE) method. However, these properties used in child head FE model normally vary in a large range in published literatures because of the insufficient child cadaver experiments. In this work, a head FE model with detailed anatomical structures is developed from the computed tomography (CT) data of a 6-year-old healthy child head. The effects of brain tissue mechanical properties on traumatic brain response are also analyzed by reconstruction of a head impact on engine hood according to Euro-NCAP testing regulation using FE method. The result showed that the variations of brain tissue mechanical parameters in linear viscoelastic constitutive model had different influences on the intracranial response. Furthermore, the opposite trend was obtained in the predicted shear stress and shear strain of brain tissues caused by the variations of mentioned parameters.

Effects of the Variation in Brain Tissue Mechanical Properties on the Intracranial Response of a 6-Year-Old Child

Directory of Open Access Journals (Sweden)

Shihai Cui

2015-01-01

Full Text Available Brain tissue mechanical properties are of importance to investigate child head injury using finite element (FE method. However, these properties used in child head FE model normally vary in a large range in published literatures because of the insufficient child cadaver experiments. In this work, a head FE model with detailed anatomical structures is developed from the computed tomography (CT data of a 6-year-old healthy child head. The effects of brain tissue mechanical properties on traumatic brain response are also analyzed by reconstruction of a head impact on engine hood according to Euro-NCAP testing regulation using FE method. The result showed that the variations of brain tissue mechanical parameters in linear viscoelastic constitutive model had different influences on the intracranial response. Furthermore, the opposite trend was obtained in the predicted shear stress and shear strain of brain tissues caused by the variations of mentioned parameters.

PGen: large-scale genomic variations analysis workflow and browser in SoyKB.

Science.gov (United States)

Liu, Yang; Khan, Saad M; Wang, Juexin; Rynge, Mats; Zhang, Yuanxun; Zeng, Shuai; Chen, Shiyuan; Maldonado Dos Santos, Joao V; Valliyodan, Babu; Calyam, Prasad P; Merchant, Nirav; Nguyen, Henry T; Xu, Dong; Joshi, Trupti

2016-10-06

With the advances in next-generation sequencing (NGS) technology and significant reductions in sequencing costs, it is now possible to sequence large collections of germplasm in crops for detecting genome-scale genetic variations and to apply the knowledge towards improvements in traits. To efficiently facilitate large-scale NGS resequencing data analysis of genomic variations, we have developed "PGen", an integrated and optimized workflow using the Extreme Science and Engineering Discovery Environment (XSEDE) high-performance computing (HPC) virtual system, iPlant cloud data storage resources and Pegasus workflow management system (Pegasus-WMS). The workflow allows users to identify single nucleotide polymorphisms (SNPs) and insertion-deletions (indels), perform SNP annotations and conduct copy number variation analyses on multiple resequencing datasets in a user-friendly and seamless way. We have developed both a Linux version in GitHub ( https://github.com/pegasus-isi/PGen-GenomicVariations-Workflow ) and a web-based implementation of the PGen workflow integrated within the Soybean Knowledge Base (SoyKB), ( http://soykb.org/Pegasus/index.php ). Using PGen, we identified 10,218,140 single-nucleotide polymorphisms (SNPs) and 1,398,982 indels from analysis of 106 soybean lines sequenced at 15X coverage. 297,245 non-synonymous SNPs and 3330 copy number variation (CNV) regions were identified from this analysis. SNPs identified using PGen from additional soybean resequencing projects adding to 500+ soybean germplasm lines in total have been integrated. These SNPs are being utilized for trait improvement using genotype to phenotype prediction approaches developed in-house. In order to browse and access NGS data easily, we have also developed an NGS resequencing data browser ( http://soykb.org/NGS_Resequence/NGS_index.php ) within SoyKB to provide easy access to SNP and downstream analysis results for soybean researchers. PGen workflow has been optimized for the most

Analysis of Δ14C variations in atmosphere

International Nuclear Information System (INIS)

Simon, J.; Sivo, A.; Richtarikova, M.; Holy, K.; Polaskova, A.; Bulko, M.; Hola, O.

2005-01-01

The Δ 14 C in the atmosphere have been measured and studied in two localities of Slovakia. The accomplished analysis proved the existence of the annual variations of the Δ 14 C with the attenuating amplitude and decreasing mean value. It seems to be logical and physically correct to describe the Δ 14 C time-dependence by the equation: y = Ae -at + Be -bt cos(ω 1 t + (φ)). The coefficients A, a, B, b, (φ) are listed in the table for both the localities. The observed variations of the Δ 14 C have a maximum in summer and minimum in winter .Probably it is caused by the higher requirement of the heat supply in winter season which is connected directly with the fossil CO 2 emissions and more intensive Suess effect. Summer maximum could be explained by the combination of the lower CO 2 emission rate and higher turbulent transport of the stratospheric 14 C to the troposphere. Using the Fourier harmonic analysis the amplitude spectra of the average annual variations were plotted. The obtained result shows that the variations have the high degree of symmetry. Furthermore, the obtained basic frequency ω 1 = 2π/12 [month -1 ] proves that the cyclic processes with the period of T = 12 [month] have a major influence on the 14 C amount in the troposphere. The presence of some higher-order harmonics is significant, but a physical interpretation has not yet been clear. In addition to the main frequency there are presented also 2ω 1 and 3ω 1 in Bratislava and 4ω 1 in Zlkovce data-set. The long-time average of the Δ 14 C in Zlkovce during years 1995-2004 is higher of about 6.6 o / oo than in Bratislava. It represents an unique evidence that the local CO 2 pollution affects the 14 C activity . The correlation on the level R 2 = 0,43 was found between Bratislava and Zlkovce atmospheric Δ 14 C data. (authors)

Analysis and Comprehensive Analytical Modeling of Statistical Variations in Subthreshold MOSFET's High Frequency Characteristics

Directory of Open Access Journals (Sweden)

Rawid Banchuin

2014-01-01

Full Text Available In this research, the analysis of statistical variations in subthreshold MOSFET's high frequency characteristics defined in terms of gate capacitance and transition frequency, have been shown and the resulting comprehensive analytical models of such variations in terms of their variances have been proposed. Major imperfection in the physical level properties including random dopant fluctuation and effects of variations in MOSFET's manufacturing process, have been taken into account in the proposed analysis and modeling. The up to dated comprehensive analytical model of statistical variation in MOSFET's parameter has been used as the basis of analysis and modeling. The resulting models have been found to be both analytic and comprehensive as they are the precise mathematical expressions in terms of physical level variables of MOSFET. Furthermore, they have been verified at the nanometer level by using 65~nm level BSIM4 based benchmarks and have been found to be very accurate with smaller than 5 % average percentages of errors. Hence, the performed analysis gives the resulting models which have been found to be the potential mathematical tool for the statistical and variability aware analysis and design of subthreshold MOSFET based VHF circuits, systems and applications.

ANALYSIS AND MODELING OF GENEVA MECHANISM

Directory of Open Access Journals (Sweden)

HARAGA Georgeta

2015-06-01

Full Text Available The paper presents some aspects theoretical and practical based on the finite element analysis and modelling of Geneva mechanism with four slots, using the CATIA graphic program. This type of mechanism is an example of intermittent gearing that translates a continuous rotation into an intermittent rotary motion. It consists of alternate periods of motion and rest without reversing direction. In this paper, some design parameters with specify a Geneva mechanism will be defined precisely such as number of driving cranks, number of slots, wheel diameter, pin diameter, etc. Finite element analysis (FEA can be used for creating a finite element model (preprocessing and visualizing the analysis results (postprocessing, and use other solvers for processing.

Comparative Transcriptome Analysis of Chinary, Assamica and Cambod tea (Camellia sinensis) Types during Development and Seasonal Variation using RNA-seq Technology

Science.gov (United States)

Kumar, Ajay; Chawla, Vandna; Sharma, Eshita; Mahajan, Pallavi; Shankar, Ravi; Yadav, Sudesh Kumar

2016-11-01

Tea quality and yield is influenced by various factors including developmental tissue, seasonal variation and cultivar type. Here, the molecular basis of these factors was investigated in three tea cultivars namely, Him Sphurti (H), TV23 (T), and UPASI-9 (U) using RNA-seq. Seasonal variation in these cultivars was studied during active (A), mid-dormant (MD), dormant (D) and mid-active (MA) stages in two developmental tissues viz. young and old leaf. Development appears to affect gene expression more than the seasonal variation and cultivar types. Further, detailed transcript and metabolite profiling has identified genes such as F3‧H, F3‧5‧H, FLS, DFR, LAR, ANR and ANS of catechin biosynthesis, while MXMT, SAMS, TCS and XDH of caffeine biosynthesis/catabolism as key regulators during development and seasonal variation among three different tea cultivars. In addition, expression analysis of genes related to phytohormones such as ABA, GA, ethylene and auxin has suggested their role in developmental tissues during seasonal variation in tea cultivars. Moreover, differential expression of genes involved in histone and DNA modification further suggests role of epigenetic mechanism in coordinating global gene expression during developmental and seasonal variation in tea. Our findings provide insights into global transcriptional reprogramming associated with development and seasonal variation in tea.

Variational methods for crystalline microstructure analysis and computation

CERN Document Server

Dolzmann, Georg

2003-01-01

Phase transformations in solids typically lead to surprising mechanical behaviour with far reaching technological applications. The mathematical modeling of these transformations in the late 80s initiated a new field of research in applied mathematics, often referred to as mathematical materials science, with deep connections to the calculus of variations and the theory of partial differential equations. This volume gives a brief introduction to the essential physical background, in particular for shape memory alloys and a special class of polymers (nematic elastomers). Then the underlying mathematical concepts are presented with a strong emphasis on the importance of quasiconvex hulls of sets for experiments, analytical approaches, and numerical simulations.

Mechanical Properties Analysis of 4340 Steel Specimen Heat Treated in Oven and Quenching in Three Different Fluids

Science.gov (United States)

Fakir, Rachid; Barka, Noureddine; Brousseau, Jean

2018-03-01

This paper proposes a statistical approach to analyze the mechanical properties of a standard test specimen, of cylindrical geometry and in steel 4340, with a diameter of 6 mm, heat-treated and quenched in three different fluids. Samples were evaluated in standard tensile test to access their characteristic quantities: hardness, modulus of elasticity, yield strength, tensile strength and ultimate deformation. The proposed approach is gradually being built (a) by a presentation of the experimental device, (b) a presentation of the experimental plan and the results of the mechanical tests, (c) anova analysis of variance and a representation of the output responses using the RSM response surface method, and (d) an analysis of the results and discussion. The feasibility and effectiveness of the proposed approach leads to a precise and reliable model capable of predicting the variation of mechanical properties, depending on the tempering temperature, the tempering time and the cooling capacity of the quenching medium.

Lateral Variations of Interplate Coupling along the Mexican Subduction Interface: Relationships with Long-Term Morphology and Fault Zone Mechanical Properties

Science.gov (United States)

Rousset, Baptiste; Lasserre, Cécile; Cubas, Nadaya; Graham, Shannon; Radiguet, Mathilde; DeMets, Charles; Socquet, Anne; Campillo, Michel; Kostoglodov, Vladimir; Cabral-Cano, Enrique; Cotte, Nathalie; Walpersdorf, Andrea

2016-10-01

Although patterns of interseismic strain accumulation above subduction zones are now routinely characterised using geodetic measurements, their physical origin, persistency through time, and relationships to seismic hazard and long-term deformation are still debated. Here, we use GPS and morphological observations from southern Mexico to explore potential mechanical links between variations in inter-SSE (in between slow slip events) coupling along the Mexico subduction zone and the long-term topography of the coastal regions from Guerrero to Oaxaca. Inter-SSE coupling solutions for two different geometries of the subduction interface are derived from an inversion of continuous GPS time series corrected from slow slip events. They reveal strong along-strike variations in the shallow coupling (i.e. at depths down to 25 km), with high-coupling zones (coupling >0.7) alternating with low-coupling zones (coupling 0.7) and transitions to uncoupled, steady slip at a relatively uniform ˜ 175-km inland from the trench. Along-strike variations in the coast-to-trench distances are strongly correlated with the GPS-derived forearc coupling variations. To explore a mechanical explanation for this correlation, we apply Coulomb wedge theory, constrained by local topographic, bathymetric, and subducting-slab slopes. Critical state areas, i.e. areas where the inner subduction wedge deforms, are spatially correlated with transitions at shallow depth between uncoupled and coupled areas of the subduction interface. Two end-member models are considered to explain the correlation between coast-to-trench distances and along-strike variations in the inter-SSE coupling. The first postulates that the inter-SSE elastic strain is partitioned between slip along the subduction interface and homogeneous plastic permanent deformation of the upper plate. In the second, permanent plastic deformation is postulated to depend on frictional transitions along the subduction plate interface. Based on the

Forcing Mechanisms for the Variations of Near-surface Temperature Lapse Rates along the Himalayas, Tibetan Plateau (HTP) and Their Surroundings

Science.gov (United States)

Kattel, D. B.; Yao, T.; Ullah, K.; Islam, G. M. T.

2016-12-01

This study investigates the monthly characteristics of near-surface temperature lapse rates (TLRs) (i.e., governed by surface energy balance) based on the 176 stations 30-year (1980 to 2010) dataset covering a wide range of topography, climatic regime and relief (4801 m) in the HTP and its surroundings. Empirical analysis based on techniques in thermodynamics and hydrostatic system were used to obtain the results. Steepest TLRs in summer is due to strong dry convection and shallowest in winter is due to inversion effect is the general pattern of TLR that reported in previous studies in other mountainous region. Result of this study reports a contrast variation of TLRs from general patterns, and suggest distinct forcing mechanisms in an annual cycle. Shallower lapse rate occurs in summer throughout the regions is due to strong heat exchange process within the boundary layer, corresponding to the warm and moist atmospheric conditions. There is a systematic differences of TLRs in winter between the northern and southern slopes the Himalayas. Steeper TLRs in winter on the northern slopes is due to intense cooling at higher elevations, corresponding to the continental dry and cold air surges, and considerable snow-temperature feedback. The differences in elevation and topography, as well as the distinct variation of turbulent heating and cooling, explain the contrast TLRs (shallower) values in winter on the southern slopes. Distinct diurnal variations of TLRs and its magnitudes between alpine, dry, humid and coastal regions is due to the variations of adiabatic mixing during the daytime in the boundary layer i.e., associated with the variations in net radiations, elevation, surface roughness and sea surface temperature. The findings of this study is useful to determine the temperature range for accurately modelling in various field such as hydrology, glaciology, ecology, forestry, agriculture, as well as inevitable for climate downscaling in complex mountainous terrain.

Mechanical behavior analysis on electrostatically actuated rectangular microplates

Science.gov (United States)

Li, Zhikang; Zhao, Libo; Jiang, Zhuangde; Ye, Zhiying; Dai, Lu; Zhao, Yulong

2015-03-01

Microplates are widely used in various MEMS devices based on electrostatic actuation such as MEMS switches, micro pumps and capacitive micromachined ultrasonic transducers (CMUTs). Accurate predictions for the mechanical behavior of the microplate under electrostatic force are important not only for the design and optimization of these electrostatic devices but also for their operation. This paper presents a novel reduced-order model for electrostatically actuated rectangular and square microplates with a new method to treat the nonlinear electrostatic force. The model was developed using Galerkin method which turned the partial-differential equation governing the microplates into an ordinary equation system. Using this model and cosine-like deflection functions, explicit expressions were established for the deflection and pull-in voltage of the rectangular and square microplates. The theoretical results were well validated with the finite element method simulations and experimental data of literature. The expressions for the deflection analysis are able to predict the deflection up to the pull-in position with an error less than 5.0%. The expressions for the pull-in voltage analysis can determine the pull-in voltages with errors less than 1.0%. Additionally, the method to calculate the capacitance variation of the electrostatically actuated microplates was proposed. These theoretical analyses are helpful for design and optimization of electrostatically actuated microdevices.

Some new mathematical methods for variational objective analysis

Science.gov (United States)

Wahba, Grace; Johnson, Donald R.

1994-01-01

Numerous results were obtained relevant to remote sensing, variational objective analysis, and data assimilation. A list of publications relevant in whole or in part is attached. The principal investigator gave many invited lectures, disseminating the results to the meteorological community as well as the statistical community. A list of invited lectures at meetings is attached, as well as a list of departmental colloquia at various universities and institutes.

Chromosome-scale comparative sequence analysis unravels molecular mechanisms of genome evolution between two wheat cultivars

KAUST Repository

Thind, Anupriya Kaur

2018-02-08

Background: Recent improvements in DNA sequencing and genome scaffolding have paved the way to generate high-quality de novo assemblies of pseudomolecules representing complete chromosomes of wheat and its wild relatives. These assemblies form the basis to compare the evolutionary dynamics of wheat genomes on a megabase-scale. Results: Here, we provide a comparative sequence analysis of the 700-megabase chromosome 2D between two bread wheat genotypes, the old landrace Chinese Spring and the elite Swiss spring wheat line CH Campala Lr22a. There was a high degree of sequence conservation between the two chromosomes. Analysis of large structural variations revealed four large insertions/deletions (InDels) of >100 kb. Based on the molecular signatures at the breakpoints, unequal crossing over and double-strand break repair were identified as the evolutionary mechanisms that caused these InDels. Three of the large InDels affected copy number of NLRs, a gene family involved in plant immunity. Analysis of single nucleotide polymorphism (SNP) density revealed three haploblocks of 8 Mb, 9 Mb and 48 Mb with a 35-fold increased SNP density compared to the rest of the chromosome. Conclusions: This comparative analysis of two high-quality chromosome assemblies enabled a comprehensive assessment of large structural variations. The insight obtained from this analysis will form the basis of future wheat pan-genome studies.

A physicochemical mechanism of chemical gas sensors using an AC analysis.

Science.gov (United States)

Moon, Jaehyun; Park, Jin-Ah; Lee, Su-Jae; Lee, Jeong-Ik; Zyung, Taehyong; Shin, Eui-Chol; Lee, Jong-Sook

2013-06-21

Electrical modeling of the chemical gas sensors was successfully applied to TiO2 nanofiber gas sensors by developing an equivalent circuit model where the junction capacitance as well as the resistance can be separated from the comparable stray capacitance. The Schottky junction impedance exhibited a characteristic skewed arc described by a Cole-Davidson function, and the variation of the fit and derived parameters with temperature, bias, and NO2 gas concentration indicated definitely a physicochemical sensing mechanism based on the Pt|TiO2 Schottky junctions against the conventional supposition of the enhanced sensitivity in nanostructured gas sensors with high grain boundary/surface area. Analysis on a model Pt|TiO2|Pt structure also confirmed the characteristic impedance response of TiO2 nanofiber sensors.

The variational principles of mechanics

CERN Document Server

Lanczos, Cornelius

1986-01-01

Analytical mechanics is, of course, a topic of perennial interest and usefulness in physics and engineering, a discipline that boasts not only many practical applications, but much inherent mathematical beauty. Unlike many standard textbooks on advanced mechanics, however, this present text eschews a primarily technical and formalistic treatment in favor of a fundamental, historical, philosophical approach. As the author remarks, there is a tremendous treasure of philosophical meaning"" behind the great theories of Euler and Lagrange, Hamilton, Jacobi, and other mathematical thinkers.Well-wr

Pan-North Pacific comparison of long-term variation in Neocalanus copepods based on stable isotope analysis

Science.gov (United States)

Chiba, Sanae; Sugisaki, Hiroya; Kuwata, Akira; Tadokoro, Kazuaki; Kobari, Toru; Yamaguchi, Atsushi; Mackas, David L.

2012-05-01

Regional differences in the mechanisms of temporal variation in the lower trophic levels in the western, central, and eastern subarctic North Pacific were studied using the nitrogen stable isotope ratio (δ15N) of the major copepod species, Neocalanus cristatus, Neocalanus flemingeri, and Neocalanus plumchrus. We used formalin-preserved specimens collected in the Oyashio region (OY), three sections from north to south along the 180° longitudinal line (180LineSA, TN, and TS), off Vancouver Island (Off-Van), and at Sta. P, during the periods of 1960-2000, 1979-1997, 1981-2007, and 1996-2007, respectively. The regional mean δ15N of the three species roughly corresponded to the surface nitrate distribution and the extent of its drawdown from winter to spring; it was higher in regions of larger seasonal drawdown as observed in the coastal regions OY and Off-Van (7-10‰), but lower in regions with less seasonal drawdown, such as in the offshore regions at St. P and stations along the 180Line (3-6‰). Time series analysis revealed possible region-specific mechanisms for temporal variation in Neocalanus δ15N. First, δ15N indicated shifts in feeding strategies between herbivorous to omnivorous/carnivorous at OY and 180LineSA, where δ15N tended to be lower in the years with warmer winters, suggesting that Neocalanus took advantage of enhanced phytoplankton production under favorable light availability due to increased stratification. Conversely, wind-induced latitudinal advection of surface water was considered to be the initial cause of interannual variation in Neocalanus δ15N at 180LineTN, 180LineTS, and Off-Van, where δ15N was higher in the years with strong southerly or westerly winds at 180LineTN and TS, and the Off-Van site. This suggests that pole-ward transport of relatively oligotrophic, southern water might enhance the uptake of the heavier isotope by phytoplankton, which Neocalanus feed upon. Another possibility at the Off-Van site, where high δ15N was

Dynamics of nonholonomic systems from variational principles embedded variation identity

International Nuclear Information System (INIS)

Guo Yongxin; Liu Shixing; Liu Chang; Chang Peng

2009-01-01

Nondeterminacy of dynamics, i.e., the nonholonomic or the vakonomic, fundamental variational principles, e.g., the Lagrange-d'Alembert or Hamiltonian, and variational operators, etc., of nonholonomic mechanical systems can be attributed to the non-uniqueness of ways how to realize nonholonomic constraints. Making use of a variation identity of nonholonomic constraints embedded into the Hamilton's principle with the method of Lagrange undetermined multipliers, three kinds of dynamics for the nonholonomic systems including the vakonomic and nonholonomic ones and a new one are obtained if the variation is respectively reduced to three conditional variations: vakonomic variation, Hoelder's variation and Suslov's variation, defined by the identity. Therefore, different dynamics of nonholonomic systems can be derived from an integral variational principle, utilizing one way of embedding constraints into the principle, with different variations. It is verified that the similar embedding of the identity into the Lagrange-d'Alembert principle gives rise to the nonholonomic dynamics but fails to give the vakonomic one unless the constraints are integrable.

Partial differential equations with variable exponents variational methods and qualitative analysis

CERN Document Server

Radulescu, Vicentiu D

2015-01-01

Partial Differential Equations with Variable Exponents: Variational Methods and Qualitative Analysis provides researchers and graduate students with a thorough introduction to the theory of nonlinear partial differential equations (PDEs) with a variable exponent, particularly those of elliptic type. The book presents the most important variational methods for elliptic PDEs described by nonhomogeneous differential operators and containing one or more power-type nonlinearities with a variable exponent. The authors give a systematic treatment of the basic mathematical theory and constructive meth

A novel pressure variation study on electronic structure, mechanical stability and thermodynamic properties of potassium based fluoroperovskite

Science.gov (United States)

Erum, Nazia; Azhar Iqbal, Muhammad

2017-09-01

The effect of pressure variation on stability, structural parameters, elastic constants, mechanical, electronic and thermodynamic properties of cubic SrKF3 fluoroperovskite have been investigated by using the full-potential linearized augmented plane wave (FP-LAPW) method combined with Quasi-harmonic Debye model in which the phonon effects are considered. The calculated lattice parameters show a prominent decrease in lattice constant and bonds length with the increase in pressure. The application of pressure from 0 to 25 GPa reveals a predominant characteristic associated with widening of bandgap with GGA and GGA plus Tran-Blaha modified Becke-Johnson (TB-mBJ) potential. The influence of pressure on elastic constants and their related mechanical parameters have been discussed in detail. Apart of linear dependence of elastic coefficients, transition from brittle to ductile behavior is also observed at elevated pressure ranges. We have successfully computed variation of lattice constant, volume expansion, bulk modulus, Debye temperature and specific heat capacities at pressure and temperature in the range of 0-25 GPa and 0-600 K.

Social variations in fetal growth in a Russian setting: an analysis of medical records.

Science.gov (United States)

Grjibovski, Andrej M; Bygren, Lars O; Svartbo, Boo; Magnus, Per

2003-10-01

The study examines variations in fetal growth by maternal social circumstances in a Russian town. All pregnant women registered at the antenatal clinics in 1999 in Severodvinsk (north-west Russia) and their live born infants comprised the study base (n=1399). Multivariate linear regression analysis was applied to quantify the effect of socio-demographic factors on birthweight and the ponderal index (PI). A clear gradient of birthweight in relation to mothers' education was revealed. Babies of the most educated mothers were 207 g (95% CI, 55, 358) heavier than babies of mothers with basic education. The average weight of those born to mothers with secondary and vocational levels of education was 172 g (95% CI, 91, 253) and 83 g (95% CI, 9, 163) lower compared with infants born to mothers with a university level of education after adjustment for age, parity, pre-pregnancy weight, marital status, maternal occupation, length of gestation, and sex of the baby. Maternal education also influenced the PI. Further studies should focus on the mechanisms of the coherence of maternal education and fetal growth. To ensure that all parts of the society benefit equally from economic and social reforms, social variations in pregnancy outcomes should be monitored during the time of transition.

Natural time analysis on the ultra-low frequency magnetic field variations prior to the 2016 Kumamoto (Japan) earthquakes

Science.gov (United States)

Potirakis, Stelios M.; Schekotov, Alexander; Asano, Tomokazu; Hayakawa, Masashi

2018-04-01

On 15 April 2016 a very strong and shallow earthquake (EQ) (MW = 7.0 , depth ∼ 10 km) occurred in Southwest Japan under the city of Kumamoto, while two very strong foreshocks (MW = 6.2 and MW = 6.0) preceded by about one day. The Kumamoto EQs being very catastrophic, have already attracted much attention among the scientific community in a quest for understanding the generation mechanism, as well as for reporting any preseismic anomalies in various observables and assessing the effectivity of the current early warning systems. In the present article we report precursory behavior of the ground-based observed ultra-low frequency (ULF) magnetic field variations before the Kumamoto EQs. By analyzing specific ULF magnetic field characteristics in terms of the recently introduced natural time (NT) analysis method, we identified that ULF magnetic field variations presented critical features from 2 weeks up to 1 month before the Kumamoto EQs. Specifically, the ULF magnetic field characteristics Fh , Fz , Dh and δDep were analyzed. The first two represent variations of the horizontal and vertical components of the geomagnetic field. The third and fourth characteristics correspond to the depression (decrease) and a relative depression of the horizontal magnetic field variations, respectively. The latter depends on the degree of ionospheric disturbance. All of them were found to reach criticality before the Kumamoto EQs; however, in different time periods for each characteristic.

Mechanical behavior analysis on electrostatically actuated rectangular microplates

International Nuclear Information System (INIS)

Li, Zhikang; Zhao, Libo; Jiang, Zhuangde; Ye, Zhiying; Zhao, Yulong; Dai, Lu

2015-01-01

Microplates are widely used in various MEMS devices based on electrostatic actuation such as MEMS switches, micro pumps and capacitive micromachined ultrasonic transducers (CMUTs). Accurate predictions for the mechanical behavior of the microplate under electrostatic force are important not only for the design and optimization of these electrostatic devices but also for their operation. This paper presents a novel reduced-order model for electrostatically actuated rectangular and square microplates with a new method to treat the nonlinear electrostatic force. The model was developed using Galerkin method which turned the partial-differential equation governing the microplates into an ordinary equation system. Using this model and cosine-like deflection functions, explicit expressions were established for the deflection and pull-in voltage of the rectangular and square microplates. The theoretical results were well validated with the finite element method simulations and experimental data of literature. The expressions for the deflection analysis are able to predict the deflection up to the pull-in position with an error less than 5.0%. The expressions for the pull-in voltage analysis can determine the pull-in voltages with errors less than 1.0%. Additionally, the method to calculate the capacitance variation of the electrostatically actuated microplates was proposed. These theoretical analyses are helpful for design and optimization of electrostatically actuated microdevices. (paper)

Dynamics of nonholonomic systems from variational principles embedded variation identity

Energy Technology Data Exchange (ETDEWEB)

Guo Yongxin, E-mail: yxguo@lnu.edu.c [College of Physics, Liaoning University, Shenyang 110036 (China); Liu Shixing [College of Physics, Liaoning University, Shenyang 110036 (China); Liu Chang; Chang Peng [Department of Applied Mechanics, Beijing Institute of Technology, Beijing 100081 (China)

2009-10-19

Nondeterminacy of dynamics, i.e., the nonholonomic or the vakonomic, fundamental variational principles, e.g., the Lagrange-d'Alembert or Hamiltonian, and variational operators, etc., of nonholonomic mechanical systems can be attributed to the non-uniqueness of ways how to realize nonholonomic constraints. Making use of a variation identity of nonholonomic constraints embedded into the Hamilton's principle with the method of Lagrange undetermined multipliers, three kinds of dynamics for the nonholonomic systems including the vakonomic and nonholonomic ones and a new one are obtained if the variation is respectively reduced to three conditional variations: vakonomic variation, Hoelder's variation and Suslov's variation, defined by the identity. Therefore, different dynamics of nonholonomic systems can be derived from an integral variational principle, utilizing one way of embedding constraints into the principle, with different variations. It is verified that the similar embedding of the identity into the Lagrange-d'Alembert principle gives rise to the nonholonomic dynamics but fails to give the vakonomic one unless the constraints are integrable.

Analysis of photoconductive mechanisms of organic-on-inorganic photodiodes

Science.gov (United States)

Ocaya, R. O.; Dere, A.; Al-Sehemi, Abdullah G.; Al-Ghamdi, Ahmed A.; Soylu, M.; Yakuphanoglu, F.

2017-09-01

In this work, it is shown that choosing an organic-on-inorganic Schottky diode for photoconductive sensing by a using a power law exponent (PLE or γ) determined at a single bias point is a limited approach. The standard literature approach does not highlight any bias voltage effects on the distribution of interface state density and other operationally important parameters. In this paper we suggest a new empirical method that holistically highlights the variation of γ with voltage, irradiance and temperature to reach a more informed choice of photosensor for real applications. We obtain a simple, plausible relation of the variation of barrier height, Φ, with voltage, irradiance and temperature. The method is evaluated with data collected previously for Schottky diodes of structure Al/p-Si/organic-semiconductor (OSC)/Au, where OSC is Coumarin-doped with graphene oxide (GO), Cobalt Phthacyanine (CoPC) doped with GO or PCBM doped with GO, respectively. The method reproduces published data for the three diodes reported at specific bias and provides for the first time some qualitative evidence of barrier height variation with light intensity, for which a possible physical basis is also given. Typically, Schottky barrier height is characterized using dark current leading to an under reporting of the effect of illumination on barrier height. Finally, since recombination mechanisms are gauged on the basis of the magnitude of PLE, the method facilitates the identification of the recombination mechanism at a given bias.

Analysis of kinetic reaction mechanisms

CERN Document Server

Turányi, Tamás

2014-01-01

Chemical processes in many fields of science and technology, including combustion, atmospheric chemistry, environmental modelling, process engineering, and systems biology, can be described by detailed reaction mechanisms consisting of numerous reaction steps. This book describes methods for the analysis of reaction mechanisms that are applicable in all these fields. Topics addressed include: how sensitivity and uncertainty analyses allow the calculation of the overall uncertainty of simulation results and the identification of the most important input parameters, the ways in which mechanisms can be reduced without losing important kinetic and dynamic detail, and the application of reduced models for more accurate engineering optimizations. This monograph is invaluable for researchers and engineers dealing with detailed reaction mechanisms, but is also useful for graduate students of related courses in chemistry, mechanical engineering, energy and environmental science and biology.

Discrete variational Hamiltonian mechanics

International Nuclear Information System (INIS)

Lall, S; West, M

2006-01-01

The main contribution of this paper is to present a canonical choice of a Hamiltonian theory corresponding to the theory of discrete Lagrangian mechanics. We make use of Lagrange duality and follow a path parallel to that used for construction of the Pontryagin principle in optimal control theory. We use duality results regarding sensitivity and separability to show the relationship between generating functions and symplectic integrators. We also discuss connections to optimal control theory and numerical algorithms

Variational Multiscale error estimator for anisotropic adaptive fluid mechanic simulations: application to convection-diffusion problems

OpenAIRE

Bazile , Alban; Hachem , Elie; Larroya-Huguet , Juan-Carlos; Mesri , Youssef

2018-01-01

International audience; In this work, we present a new a posteriori error estimator based on the Variational Multiscale method for anisotropic adaptive fluid mechanics problems. The general idea is to combine the large scale error based on the solved part of the solution with the sub-mesh scale error based on the unresolved part of the solution. We compute the latter with two different methods: one using the stabilizing parameters and the other using bubble functions. We propose two different...

Mechanisms of Surface Antigenic Variation in the Human Pathogenic Fungus Pneumocystis jirovecii.

Science.gov (United States)

Schmid-Siegert, Emanuel; Richard, Sophie; Luraschi, Amanda; Mühlethaler, Konrad; Pagni, Marco; Hauser, Philippe M

2017-11-07

Microbial pathogens commonly escape the human immune system by varying surface proteins. We investigated the mechanisms used for that purpose by Pneumocystis jirovecii This uncultivable fungus is an obligate pulmonary pathogen that in immunocompromised individuals causes pneumonia, a major life-threatening infection. Long-read PacBio sequencing was used to assemble a core of subtelomeres of a single P. jirovecii strain from a bronchoalveolar lavage fluid specimen from a single patient. A total of 113 genes encoding surface proteins were identified, including 28 pseudogenes. These genes formed a subtelomeric gene superfamily, which included five families encoding adhesive glycosylphosphatidylinositol (GPI)-anchored glycoproteins and one family encoding excreted glycoproteins. Numerical analyses suggested that diversification of the glycoproteins relies on mosaic genes created by ectopic recombination and occurs only within each family. DNA motifs suggested that all genes are expressed independently, except those of the family encoding the most abundant surface glycoproteins, which are subject to mutually exclusive expression. PCR analyses showed that exchange of the expressed gene of the latter family occurs frequently, possibly favored by the location of the genes proximal to the telomere because this allows concomitant telomere exchange. Our observations suggest that (i) the P. jirovecii cell surface is made of a complex mixture of different surface proteins, with a majority of a single isoform of the most abundant glycoprotein, (ii) genetic mosaicism within each family ensures variation of the glycoproteins, and (iii) the strategy of the fungus consists of the continuous production of new subpopulations composed of cells that are antigenically different. IMPORTANCE Pneumocystis jirovecii is a fungus causing severe pneumonia in immunocompromised individuals. It is the second most frequent life-threatening invasive fungal infection. We have studied the mechanisms

A comprehensive investigation into the effect of temperature variation on the mechanical properties of sustainable concrete

Directory of Open Access Journals (Sweden)

El Mir Abdulkader

2017-01-01

Full Text Available Minimizing the production energy and resources consumption are the key principle for engineering sustainability. In the case of concrete structures, this concept can be achieved by the use of materials in the most efficient way considering in the mix design the optimal mechanical and durability properties. The substitution of ordinary Portland cement for other supplementary cementitious materials is assessing the possibility of enhancing the sustainability and decreasing the environmental impact of concrete. Mass concrete is rich in cementitious materials which results in high temperature within the concrete, hence several hazards such as cracking or temperature differences between the interior and the surface of concrete could be prevented. An experimental study evaluated on several one cubic meter sized concrete elements in which during the primary phase of hydration, the temperature variation is recorded in several location offsets with respect to time. Thermal variations results are analyzed in accordance with the cement type, CO2 emission production of cement, compressive strength, water tightness, drying shrinkage and rapid chloride migration coefficient. The results indicate that slag cement CEM III/B 32.5, that incorporates highest amount of slag, ensured improved mechanical, thermal and durability properties in comparison with ordinary Portland cement CEM I 32.5.

Post-transcriptional Mechanisms Contribute Little to Phenotypic Variation in Snake Venoms.

Science.gov (United States)

Rokyta, Darin R; Margres, Mark J; Calvin, Kate

2015-09-09

Protein expression is a major link in the genotype-phenotype relationship, and processes affecting protein abundances, such as rates of transcription and translation, could contribute to phenotypic evolution if they generate heritable variation. Recent work has suggested that mRNA abundances do not accurately predict final protein abundances, which would imply that post-transcriptional regulatory processes contribute significantly to phenotypes. Post-transcriptional processes also appear to buffer changes in transcriptional patterns as species diverge, suggesting that the transcriptional changes have little or no effect on the phenotypes undergoing study. We tested for concordance between mRNA and protein expression levels in snake venoms by means of mRNA-seq and quantitative mass spectrometry for 11 snakes representing 10 species, six genera, and three families. In contrast to most previous work, we found high correlations between venom gland transcriptomes and venom proteomes for 10 of our 11 comparisons. We tested for protein-level buffering of transcriptional changes during species divergence by comparing the difference between transcript abundance and protein abundance for three pairs of species and one intraspecific pair. We found no evidence for buffering during divergence of our three species pairs but did find evidence for protein-level buffering for our single intraspecific comparison, suggesting that buffering, if present, was a transient phenomenon in venom divergence. Our results demonstrated that post-transcriptional mechanisms did not contribute significantly to phenotypic evolution in venoms and suggest a more prominent and direct role for cis-regulatory evolution in phenotypic variation, particularly for snake venoms. Copyright © 2015 Rokyta et al.

Analysis of Long-Term Temperature Variations in the Human Body.

Science.gov (United States)

Dakappa, Pradeepa Hoskeri; Mahabala, Chakrapani

2015-01-01

Body temperature is a continuous physiological variable. In normal healthy adults, oral temperature is estimated to vary between 36.1°C and 37.2°C. Fever is a complex host response to many external and internal agents and is a potential contributor to many clinical conditions. Despite being one of the foremost vital signs, temperature and its analysis and variations during many pathological conditions has yet to be examined in detail using mathematical techniques. Classical fever patterns based on recordings obtained every 8-12 h have been developed. However, such patterns do not provide meaningful information in diagnosing diseases. Because fever is a host response, it is likely that there could be a unique response to specific etiologies. Continuous long-term temperature monitoring and pattern analysis using specific analytical methods developed in engineering and physics could aid in revealing unique fever responses of hosts and in different clinical conditions. Furthermore, such analysis can potentially be used as a novel diagnostic tool and to study the effect of pharmaceutical agents and other therapeutic protocols. Thus, the goal of our article is to present a comprehensive review of the recent relevant literature and analyze the current state of research regarding temperature variations in the human body.

Mechanics analysis of axisymmetric thin-walled part in warm sheet hydroforming

Directory of Open Access Journals (Sweden)

Yang Xiying

2015-10-01

Full Text Available To obtain the influence of fluid pressure and temperature on warm hydroforming of 5A06-O aluminum alloy sheet, the unified mechanics equilibrium equations, which take through-thickness normal stress and friction into account, were established in spherical coordinate system. The distribution of through-thickness normal stress in the thickness direction was determined. The relation between through-thickness normal stress and fluid pressure was also analyzed in different regions of cylindrical cup. Based on the method of subtracting one increasing function from another, the constitutive equation of 5A06-O applied to warm hydroforming was established and in a good agreement with uniaxial tensile data. Based on whether the thickness variation was taken into account, two mechanic models were established to do the comparative study. The results for the studied case show that the calculated stress values are pretty close according to the two models and consistent with results of finite element analysis; the thickness distribution in flange computed by the second model conforms to the experimental data. Finally, the influences of fluid pressure on the flange thickness and radial stress were analyzed.

ANALYSIS ON THE VARIATION OF MEDIAL ROTATION VALUES ACCORDING TO THE POSITION OF THE HUMERAL DIAPHYSIS.

Science.gov (United States)

Miyazaki, Alberto Naoki; Fregoneze, Marcelo; Santos, Pedro Doneux; da Silva, Luciana Andrade; do Val Sella, Guilherme; Cohen, Carina; Busin Giora, Taís Stedile; Checchia, Sergio Luiz; Raia, Fabio; Pekelman, Hélio; Cymrot, Raquel

2012-01-01

To analyze the validity of measurements of medial rotation (MR) of the shoulder, using vertebral levels, according to the variation in the position of the humeral diaphysis, and to test the bi-goniometer as a new measuring instrument. 140 shoulders (70 patients) were prospectively evaluated in cases presenting unilateral shoulder MR limitation. The vertebral level was evaluated by means of a visual scale and was correlated with the angle obtained according to the position of the humeral diaphysis, using the bi-goniometer developed with the Department of Mechanical Engineering of Mackenzie University. The maximum vertebral level reached through MR on the unaffected side ranged from T3 to T12, and on the affected side, from T6 to the trochanter. Repositioning of the affected limb in MR according to the angular values on the normal side showed that 57.13% of the patients reached lower levels, between the sacrum, gluteus and trochanter. From analysis on the maximum vertebral level attained and the variation between the affected angle x (frontal plane: abduction and MR of the shoulder) and the unaffected angle x in MR, we observed that the greater the angle of the diaphyseal axis was, the lower the variation in the vertebral level attained was. From evaluating the linear correlation between the variables of difference in maximum vertebral level reached and variation in the affected angle y (extension and abduction of the shoulder) and the unaffected angle y in MR, we observed that there was no well-established linear relationship between these variables. Measurement of MR using vertebral levels does not correspond to the real values, since it varies according to the positioning of the humeral diaphysis.

Family matters: effect of host plant variation in chemical and mechanical defenses on a sequestering specialist herbivore.

Science.gov (United States)

Dimarco, Romina D; Nice, Chris C; Fordyce, James A

2012-11-01

Insect herbivores contend with various plant traits that are presumed to function as feeding deterrents. Paradoxically, some specialist insect herbivores might benefit from some of these plant traits, for example by sequestering plant chemical defenses that herbivores then use as their own defense against natural enemies. Larvae of the butterfly species Battus philenor (L.) (Papilionidae) sequester toxic alkaloids (aristolochic acids) from their Aristolochia host plants, rendering larvae and adults unpalatable to a broad range of predators. We studied the importance of two putative defensive traits in Aristolochia erecta: leaf toughness and aristolochic acid content, and we examined the effect of intra- and interplant chemical variation on the chemical phenotype of B. philenor larvae. It has been proposed that genetic variation for sequestration ability is "invisible to natural selection" because intra- and interindividual variation in host-plant chemistry will largely eliminate a role for herbivore genetic variation in determining an herbivore's chemical phenotype. We found substantial intra- and interplant variation in leaf toughness and in the aristolochic acid chemistry in A. erecta. Based on field observations and laboratory experiments, we showed that first-instar larvae preferentially fed on less tough, younger leaves and avoided tougher, older leaves, and we found no evidence that aristolochic acid content influenced first-instar larval foraging. We found that the majority of variation in the amount of aristolochic acid sequestered by larvae was explained by larval family, not by host-plant aristolochic acid content. Heritable variation for sequestration is the predominant determinant of larval, and likely adult, chemical phenotype. This study shows that for these highly specialized herbivores that sequester chemical defenses, traits that offer mechanical resistance, such as leaf toughness, might be more important determinants of early-instar larval

Variation of Mechanical Properties of High RRR And Reactor Grade Niobium With Heat Treatments

Energy Technology Data Exchange (ETDEWEB)

Ganapati Myneni; H. Umezawa

2003-06-01

Superconducting rf cavities used as accelerating structures in particle accelerators are made from high purity niobium with residual resistance ratios greater than 250. Reactor grade niobium is also used to make wave-guide and/or end group components for these accelerating structures. The major impurities in this type of niobium are interstitially dissolved gases such as hydrogen, nitrogen, and oxygen in addition to carbon. After fabricating the niobium accelerating structures, they are subjected to heat treatments for several hours in vacuum at temperatures of up to 900 C for degassing hydrogen or up to 1400 C for improving the thermal conductivity of niobium considerably. These heat treatments are affecting the mechanical properties of niobium drastically. In this paper the variation of the mechanical properties of high purity and reactor grade niobium with heat treatments in a vacuum of {approx} 10{sup -6} Torr and temperatures from 600 C to 1250 C for periods of 10 to 6 hours are presented.

Analysis of the kinetics of decohesion process in the conditions of cyclic temperature variations

International Nuclear Information System (INIS)

Zuchowski, R.

1981-01-01

Specimens made of four types of heat-resistant steels were used in the investigation. Various variants of loading process were applied, resulting in thermal fatigue, cyclic creep and isothermal fatigue. Stress or strain variation as well as intensity of acoustic emission were recorded during the tests as a function of time. Cyclic variations of strain or stress amplitude were found to occur one full period covering few to several cycles. Comparing the relative number of acoustic emission impulses with the variation of stress or strain leads to the conclusion that cyclic character of strain or stress variation results from cyclic character of damage cumulation process. This statement is confirmed by the results of material damage degree determination based on specific strain work measurements. Results of investigation testify to the equivalence of action (in terms of energy) of cyclically variable force field at constant temperature and of constant force field in the conditions of cyclic temperature variations. Damage mechanism can be different in each case, because it depends (for a given material) on loading process parameters and in particular - on temperature and stress value. (orig./HP)

Mode instability in one-dimensional anharmonic lattices: Variational equation approach

Science.gov (United States)

Yoshimura, K.

1999-03-01

The stability of normal mode oscillations has been studied in detail under the single-mode excitation condition for the Fermi-Pasta-Ulam-β lattice. Numerical experiments indicate that the mode stability depends strongly on k/N, where k is the wave number of the initially excited mode and N is the number of degrees of freedom in the system. It has been found that this feature does not change when N increases. We propose an average variational equation - approximate version of the variational equation - as a theoretical tool to facilitate a linear stability analysis. It is shown that this strong k/N dependence of the mode stability can be explained from the view point of the linear stability of the relevant orbits. We introduce a low-dimensional approximation of the average variational equation, which approximately describes the time evolution of variations in four normal mode amplitudes. The linear stability analysis based on this four-mode approximation demonstrates that the parametric instability mechanism plays a crucial role in the strong k/N dependence of the mode stability.

Variation in shoot tolerance mechanisms not related to ion toxicity in barley

KAUST Repository

Tilbrook, Joanne

2017-09-27

Soil salinity can severely reduce crop growth and yield. Many studies have investigated salinity tolerance mechanisms in cereals using phenotypes that are relatively easy to measure. The majority of these studies measured the accumulation of shoot Na+ and the effect this has on plant growth. However, plant growth is reduced immediately after exposure to NaCl before Na+ accumulates to toxic concentrations in the shoot. In this study, nondestructive and destructive measurements are used to evaluate the responses of 24 predominately Australian barley (Hordeum vulgare L.) lines at 0, 150 and 250mMNaCl. Considerable variation for shoot tolerance mechanisms not related to ion toxicity (shoot ion-independent tolerance) was found, withsome lines being able to maintain substantial growth rates under salt stress, whereas others stopped growing. Hordeum vulgare spp. spontaneum accessions and barley landraces predominantly had the best shoot ion independent tolerance, although two commercial cultivars, Fathom and Skiff, also had high tolerance. The tolerance of cv. Fathom may be caused by a recent introgression from H. vulgare L. spp. spontaneum. This study shows that the most salt-tolerant barley lines are those that contain both shoot ion-independent tolerance and the ability to exclude Na+ from the shoot (and thus maintain high K+: Na+ ratios).

Variation in shoot tolerance mechanisms not related to ion toxicity in barley

KAUST Repository

Tilbrook, Joanne; Schilling, Rhiannon K.; Berger, Bettina; Garcia, Alexandre F.; Trittermann, Christine; Coventry, Stewart; Rabie, Huwaida; Brien, Chris; Nguyen, Martin; Tester, Mark A.; Roy, Stuart J.

2017-01-01

Soil salinity can severely reduce crop growth and yield. Many studies have investigated salinity tolerance mechanisms in cereals using phenotypes that are relatively easy to measure. The majority of these studies measured the accumulation of shoot Na+ and the effect this has on plant growth. However, plant growth is reduced immediately after exposure to NaCl before Na+ accumulates to toxic concentrations in the shoot. In this study, nondestructive and destructive measurements are used to evaluate the responses of 24 predominately Australian barley (Hordeum vulgare L.) lines at 0, 150 and 250mMNaCl. Considerable variation for shoot tolerance mechanisms not related to ion toxicity (shoot ion-independent tolerance) was found, withsome lines being able to maintain substantial growth rates under salt stress, whereas others stopped growing. Hordeum vulgare spp. spontaneum accessions and barley landraces predominantly had the best shoot ion independent tolerance, although two commercial cultivars, Fathom and Skiff, also had high tolerance. The tolerance of cv. Fathom may be caused by a recent introgression from H. vulgare L. spp. spontaneum. This study shows that the most salt-tolerant barley lines are those that contain both shoot ion-independent tolerance and the ability to exclude Na+ from the shoot (and thus maintain high K+: Na+ ratios).

In silico detection of sequence variations modifying transcriptional regulation.

Directory of Open Access Journals (Sweden)

Malin C Andersen

2008-01-01

Full Text Available Identification of functional genetic variation associated with increased susceptibility to complex diseases can elucidate genes and underlying biochemical mechanisms linked to disease onset and progression. For genes linked to genetic diseases, most identified causal mutations alter an encoded protein sequence. Technological advances for measuring RNA abundance suggest that a significant number of undiscovered causal mutations may alter the regulation of gene transcription. However, it remains a challenge to separate causal genetic variations from linked neutral variations. Here we present an in silico driven approach to identify possible genetic variation in regulatory sequences. The approach combines phylogenetic footprinting and transcription factor binding site prediction to identify variation in candidate cis-regulatory elements. The bioinformatics approach has been tested on a set of SNPs that are reported to have a regulatory function, as well as background SNPs. In the absence of additional information about an analyzed gene, the poor specificity of binding site prediction is prohibitive to its application. However, when additional data is available that can give guidance on which transcription factor is involved in the regulation of the gene, the in silico binding site prediction improves the selection of candidate regulatory polymorphisms for further analyses. The bioinformatics software generated for the analysis has been implemented as a Web-based application system entitled RAVEN (regulatory analysis of variation in enhancers. The RAVEN system is available at http://www.cisreg.ca for all researchers interested in the detection and characterization of regulatory sequence variation.

In Silico Detection of Sequence Variations Modifying Transcriptional Regulation

Science.gov (United States)

Andersen, Malin C; Engström, Pär G; Lithwick, Stuart; Arenillas, David; Eriksson, Per; Lenhard, Boris; Wasserman, Wyeth W; Odeberg, Jacob

2008-01-01

Identification of functional genetic variation associated with increased susceptibility to complex diseases can elucidate genes and underlying biochemical mechanisms linked to disease onset and progression. For genes linked to genetic diseases, most identified causal mutations alter an encoded protein sequence. Technological advances for measuring RNA abundance suggest that a significant number of undiscovered causal mutations may alter the regulation of gene transcription. However, it remains a challenge to separate causal genetic variations from linked neutral variations. Here we present an in silico driven approach to identify possible genetic variation in regulatory sequences. The approach combines phylogenetic footprinting and transcription factor binding site prediction to identify variation in candidate cis-regulatory elements. The bioinformatics approach has been tested on a set of SNPs that are reported to have a regulatory function, as well as background SNPs. In the absence of additional information about an analyzed gene, the poor specificity of binding site prediction is prohibitive to its application. However, when additional data is available that can give guidance on which transcription factor is involved in the regulation of the gene, the in silico binding site prediction improves the selection of candidate regulatory polymorphisms for further analyses. The bioinformatics software generated for the analysis has been implemented as a Web-based application system entitled RAVEN (regulatory analysis of variation in enhancers). The RAVEN system is available at http://www.cisreg.ca for all researchers interested in the detection and characterization of regulatory sequence variation. PMID:18208319

Cytoplasmic genetic variation and extensive cytonuclear interactions influence natural variation in the metabolome

DEFF Research Database (Denmark)

Joseph, Bindu; Corwin, Jason A.; Li, Baohua

2013-01-01

Understanding genome to phenotype linkages has been greatly enabled by genomic sequencing. However, most genome analysis is typically confined to the nuclear genome. We conducted a metabolomic QTL analysis on a reciprocal RIL population structured to examine how variation in the organelle genomes...... was a central hub in the epistatic network controlling the plant metabolome. This epistatic influence manifested such that the cytoplasmic background could alter or hide pairwise epistasis between nuclear loci. Thus, cytoplasmic genetic variation plays a central role in controlling natural variation...... in metabolomic networks. This suggests that cytoplasmic genomes must be included in any future analysis of natural variation....

Mechanical Modelling of Pultrusion Process: 2D and 3D Numerical Approaches

DEFF Research Database (Denmark)

Baran, Ismet; Hattel, Jesper Henri; Akkerman, Remko

2015-01-01

The process induced variations such as residual stresses and distortions are a critical issue in pultrusion, since they affect the structural behavior as well as the mechanical properties and geometrical precision of the final product. In order to capture and investigate these variations......, a mechanical analysis should be performed. In the present work, the two dimensional (2D) quasi-static plane strain mechanical model for the pultrusion of a thick square profile developed by the authors is further improved using generalized plane strain elements. In addition to that, a more advanced 3D thermo......-chemical-mechanical analysis is carried out using 3D quadratic elements which is a novel application for the numerical modelling of the pultrusion process. It is found that the 2D mechanical models give relatively reasonable and accurate stress and displacement evolutions in the transverse direction as compared to the 3D...

Isogeometric Analysis and Shape Optimization in Fluid Mechanics

DEFF Research Database (Denmark)

Nielsen, Peter Nørtoft

This thesis brings together the fields of fluid mechanics, as the study of fluids and flows, isogeometric analysis, as a numerical method to solve engineering problems using computers, and shape optimization, as the art of finding "best" shapes of objects based on some notion of goodness. The flow...... approximations, and for shape optimization purposes also due to its tight connection between the analysis and geometry models. The thesis is initiated by short introductions to fluid mechanics, and to the building blocks of isogeometric analysis. As the first contribution of the thesis, a detailed description...... isogeometric analysis may serve as a natural framework for shape optimization within fluid mechanics. We construct an efficient regularization measure for avoiding inappropriate parametrizations during optimization, and various numerical examples of shape optimization for fluids are considered, serving...

[Genetic variation analysis of canine parvovirus VP2 gene in China].

Science.gov (United States)

Yi, Li; Cheng, Shi-Peng; Yan, Xi-Jun; Wang, Jian-Ke; Luo, Bin

2009-11-01

To recognize the molecular biology character, phylogenetic relationship and the state quo prevalent of Canine parvovirus (CPV), Faecal samnples from pet dogs with acute enteritis in the cities of Beijing, Wuhan, and Nanjing were collected and tested for CPV by PCR and other assay between 2006 and 2008. There was no CPV to FPV (MEV) variation by PCR-RFLP analysis in all samples. The complete ORFs of VP2 genes were obtained by PCR from 15 clinical CPVs and 2 CPV vaccine strains. All amplicons were cloned and sequenced. Analysis of the VP2 sequences showed that clinical CPVs both belong to CPV-2a subtype, and could be classified into a new cluster by amino acids contrasting which contains Tyr-->Ile (324) mutation. Besides the 2 CPV vaccine strains belong to CPV-2 subtype, and both of them have scattered variation in amino acids residues of VP2 protein. Construction of the phylogenetic tree based on CPV VP2 sequence showed these 15 CPV clinical strains were in close relationship with Korea strain K001 than CPV-2a isolates in other countries at early time, It is indicated that the canine parvovirus genetic variation was associated with location and time in some degree. The survey of CPV capsid protein VP2 gene provided the useful information for the identification of CPV types and understanding of their genetic relationship.

A Nationwide Analysis of Cost Variation for Autologous Free Flap Breast Reconstruction.

Science.gov (United States)

Billig, Jessica I; Lu, Yiwen; Momoh, Adeyiza O; Chung, Kevin C

2017-11-01

Cost variation among hospitals has been demonstrated for surgical procedures. Uncovering these differences has helped guide measures taken to reduce health care spending. To date, the fiscal consequence of hospital variation for autologous free flap breast reconstruction is unknown. To investigate factors that influence cost variation for autologous free flap breast reconstruction. A secondary cross-sectional analysis was performed using the Healthcare Cost and Utilization Project National Inpatient Sample database from 2008 to 2010. The dates of analysis were September 2016 to February 2017. The setting was a stratified sample of all US community hospitals. Participants were female patients who were diagnosed as having breast cancer or were at high risk for breast cancer and underwent autologous free flap breast reconstruction. Variables of interest included demographic data, hospital characteristics, length of stay, complications (surgical and systemic), and inpatient cost. The study used univariate and generalized linear mixed models to examine associations between patient and hospital characteristics and cost. A total of 3302 patients were included in the study, with a median age of 50 years (interquartile range, 44-57 years). The mean cost for autologous free flap breast reconstruction was $22 677 (interquartile range, $14 907-$33 391). Flap reconstructions performed at high-volume hospitals were significantly more costly than those performed at low-volume hospitals ($24 360 vs $18 918, P Logistic regression demonstrated that hospital volume correlated with increased cost (Exp[β], 1.06; 95% CI, 1.02-1.11; P = .003). Fewer surgical complications (16.4% [169 of 1029] vs 23.7% [278 of 1174], P cost variation among patients undergoing autologous free flap breast reconstruction. Experience, as measured by a hospital's volume, provides quality health care with fewer complications but is more costly. Longer length of stay contributed to regional

Optimization of rhombic drive mechanism used in beta-type Stirling engine based on dimensionless analysis

International Nuclear Information System (INIS)

Cheng, Chin-Hsiang; Yang, Hang-Suin

2014-01-01

In the present study, optimization of rhombic drive mechanism used in a beta-type Stirling engine is performed based on a dimensionless theoretical model toward maximization of shaft work output. Displacements of the piston and the displacer with the rhombic drive mechanism and variations of volumes and pressure in the chambers of the engine are firstly expressed in dimensionless form. Secondly, Schmidt analysis is incorporated with Senft's shaft work theory to build a dimensionless thermodynamic model, which is employed to yield the dimensionless shaft work. The dimensionless model is verified with experimental data. It is found that the relative error between the experimental and the theoretical data in dimensionless shaft work is lower than 5.2%. This model is also employed to investigate the effects of the influential geometric parameters on the shaft work, and the optimization of these parameters is attempted. Eventually, design charts that help design the optimal geometry of the rhombic drive mechanism are presented in this report. - Highlights: • Specifically dealing with optimization of rhombic-drive mechanism used in Stirling engine based on dimensionless model. • Propose design charts that help determine the optimal geometric parameters of the rhombic drive mechanism. • Complete study of influential factors affecting the shaft work output

Analysis of genetic variation and potential applications in genome-scale metabolic modeling

DEFF Research Database (Denmark)

Cardoso, Joao; Andersen, Mikael Rørdam; Herrgard, Markus

2015-01-01

scale and resolution by re-sequencing thousands of strains systematically. In this article, we review challenges in the integration and analysis of large-scale re-sequencing data, present an extensive overview of bioinformatics methods for predicting the effects of genetic variants on protein function......Genetic variation is the motor of evolution and allows organisms to overcome the environmental challenges they encounter. It can be both beneficial and harmful in the process of engineering cell factories for the production of proteins and chemicals. Throughout the history of biotechnology......, there have been efforts to exploit genetic variation in our favor to create strains with favorable phenotypes. Genetic variation can either be present in natural populations or it can be artificially created by mutagenesis and selection or adaptive laboratory evolution. On the other hand, unintended genetic...

On the continuum mechanics approach for the analysis of single walled carbon nanotubes

Science.gov (United States)

Chaudhry, M. S.; Czekanski, A.

2016-04-01

Today carbon nanotubes have found various applications in structural, thermal and almost every field of engineering. Carbon nanotubes provide great strength, stiffness resilience properties. Evaluating the structural behavior of nanoscale materials is an important task. In order to understand the materialistic behavior of nanotubes, atomistic models provide a basis for continuum mechanics modelling. Although the properties of bulk materials are consistent with the size and depends mainly on the material but the properties when we are in Nano-range, continuously change with the size. Such models start from the modelling of interatomic interaction. Modelling and simulation has advantage of cost saving when compared with the experiments. So in this project our aim is to use a continuum mechanics model of carbon nanotubes from atomistic perspective and analyses some structural behaviors of nanotubes. It is generally recognized that mechanical properties of nanotubes are dependent upon their structural details. The properties of nanotubes vary with the varying with the interatomic distance, angular orientation, radius of the tube and many such parameters. Based on such models one can analyses the variation of young's modulus, strength, deformation behavior, vibration behavior and thermal behavior. In this study some of the structural behaviors of the nanotubes are analyzed with the help of continuum mechanics models. Using the properties derived from the molecular mechanics model a Finite Element Analysis of carbon nanotubes is performed and results are verified. This study provides the insight on continuum mechanics modelling of nanotubes and hence the scope to study the effect of various parameters on some structural behavior of nanotubes.

Mechanism and Effect of Temperature on Variations in Antibiotic Resistance Genes during Anaerobic Digestion of Dairy Manure

Science.gov (United States)

Sun, Wei; Qian, Xun; Gu, Jie; Wang, Xiao-Juan; Duan, Man-Li

2016-07-01

Animal manure comprises an important reservoir for antibiotic resistance genes (ARGs), but the variation in ARGs during anaerobic digestion at various temperatures and its underlying mechanism remain unclear. Thus, we performed anaerobic digestion using dairy manure at three temperature levels (moderate: 20 °C, mesophilic: 35 °C, and thermophilic: 55 °C), to analyze the dynamics of ARGs and bacterial communities by quantitative PCR and 16S rRNA gene sequencing. We found that 8/10 detected ARGs declined and 5/10 decreased more than 1.0 log during thermophilic digestion, whereas only four and five ARGs decreased during moderate and mesophilic digestion, respectively. The changes in ARGs and bacterial communities were similar under the moderate and mesophilic treatments, but distinct from those in the thermophilic system. Potential pathogens such as Bacteroidetes, Proteobacteria, and Corynebacterium were removed by thermophilic digestion but not by moderate and mesophilic digestion. The bacterial community succession was the dominant mechanism that influenced the variation in ARGs and integrons during anaerobic digestion. Thermophilic digestion decreased the amount of mesophilic bacteria (Bacteroidetes and Proteobacteria) carrying ARGs. Anaerobic digestion generally decreased the abundance of integrons by eliminating the aerobic hosts of integrons (Actinomycetales and Bacilli). Thermophilic anaerobic digestion is recommended for the treatment and reuse of animal manure.

Mechanism and Effect of Temperature on Variations in Antibiotic Resistance Genes during Anaerobic Digestion of Dairy Manure.

Science.gov (United States)

Sun, Wei; Qian, Xun; Gu, Jie; Wang, Xiao-Juan; Duan, Man-Li

2016-07-22

Animal manure comprises an important reservoir for antibiotic resistance genes (ARGs), but the variation in ARGs during anaerobic digestion at various temperatures and its underlying mechanism remain unclear. Thus, we performed anaerobic digestion using dairy manure at three temperature levels (moderate: 20 °C, mesophilic: 35 °C, and thermophilic: 55 °C), to analyze the dynamics of ARGs and bacterial communities by quantitative PCR and 16S rRNA gene sequencing. We found that 8/10 detected ARGs declined and 5/10 decreased more than 1.0 log during thermophilic digestion, whereas only four and five ARGs decreased during moderate and mesophilic digestion, respectively. The changes in ARGs and bacterial communities were similar under the moderate and mesophilic treatments, but distinct from those in the thermophilic system. Potential pathogens such as Bacteroidetes, Proteobacteria, and Corynebacterium were removed by thermophilic digestion but not by moderate and mesophilic digestion. The bacterial community succession was the dominant mechanism that influenced the variation in ARGs and integrons during anaerobic digestion. Thermophilic digestion decreased the amount of mesophilic bacteria (Bacteroidetes and Proteobacteria) carrying ARGs. Anaerobic digestion generally decreased the abundance of integrons by eliminating the aerobic hosts of integrons (Actinomycetales and Bacilli). Thermophilic anaerobic digestion is recommended for the treatment and reuse of animal manure.

Analysis of Arterial Mechanics During Head-Down-Tilt Bed Rest

Science.gov (United States)

Elliott, Morgan B.; Martin, David S.; Westby, Christian M.; Stenger, Michael B.; Platts, Steven H.

2014-01-01

Carotid, brachial, and tibial arteries reacted differently to HDTBR. Previous studies have not analyzed the mechanical properties of the human brachial or anterior tibial arteries. After slight variations during bed-rest, arterial mechanical properties and IMT returned to pre-bed rest values, with the exception of tibial stiffness and PSE, which continued to be reduced post-bed rest while the DC remained elevated. The tibial artery remodeling was probably due to decreased pressure and volume. Resulting implications for longer duration spaceflight are unclear. Arterial health may be affected by microgravity, as shown by increased thoracic aorta stiffness in other ground based simulations (Aubert).

Genome size variation among and within Camellia species by using flow cytometric analysis.

Directory of Open Access Journals (Sweden)

Hui Huang

Full Text Available BACKGROUND: The genus Camellia, belonging to the family Theaceae, is economically important group in flowering plants. Frequent interspecific hybridization together with polyploidization has made them become taxonomically "difficult taxa". The DNA content is often used to measure genome size variation and has largely advanced our understanding of plant evolution and genome variation. The goals of this study were to investigate patterns of interspecific and intraspecific variation of DNA contents and further explore genome size evolution in a phylogenetic context of the genus. METHODOLOGY/PRINCIPAL FINDINGS: The DNA amount in the genus was determined by using propidium iodide flow cytometry analysis for a total of 139 individual plants representing almost all sections of the two subgenera, Camellia and Thea. An improved WPB buffer was proven to be suitable for the Camellia species, which was able to counteract the negative effects of secondary metabolite and generated high-quality results with low coefficient of variation values (CV <5%. Our results showed trivial effects on different tissues of flowers, leaves and buds as well as cytosolic compounds on the estimation of DNA amount. The DNA content of C. sinensis var. assamica was estimated to be 1C = 3.01 pg by flow cytometric analysis, which is equal to a genome size of about 2940 Mb. CONCLUSION: Intraspecific and interspecific variations were observed in the genus Camellia, and as expected, the latter was larger than the former. Our study suggests a directional trend of increasing genome size in the genus Camellia probably owing to the frequent polyploidization events.

AFLP analysis of Cynodon dactylon (L.) Pers. var. dactylon genetic variation.

Science.gov (United States)

Wu, Y Q; Taliaferro, C M; Bai, G H; Anderson, M P

2004-08-01

Cynodon dactylon (L.) Pers. var. dactylon (common bermudagrass) is geographically widely distributed between about lat 45 degrees N and lat 45 degrees S, penetrating to about lat 53 degrees N in Europe. The extensive variation of morphological and adaptive characteristics of the taxon is substantially documented, but information is lacking on DNA molecular variation in geographically disparate forms. Accordingly, this study was conducted to assess molecular genetic variation and genetic relatedness among 28 C. dactylon var. dactylon accessions originating from 11 countries on 4 continents (Africa, Asia, Australia, and Europe). A fluorescence-labeled amplified fragment length polymorphism (AFLP) DNA profiling method was used to detect the genetic diversity and relatedness. On the basis of 443 polymorphic AFLP fragments from 8 primer combinations, the accessions were grouped into clusters and subclusters associating with their geographic origins. Genetic similarity coefficients (SC) for the 28 accessions ranged from 0.53 to 0.98. Accessions originating from Africa, Australia, Asia, and Europe formed major groupings as indicated by cluster and principal coordinate analysis. Accessions from Australia and Asia, though separately clustered, were relatively closely related and most distantly related to accessions of European origin. African accessions formed two distant clusters and had the greatest variation in genetic relatedness relative to accessions from other geographic regions. Sampling the full extent of genetic variation in C. dactylon var. dactylon would require extensive germplasm collection in the major geographic regions of its distributional range.

Investigation of variation of additional enthalpy of proteins with respect to pH by statistical mechanical methods

International Nuclear Information System (INIS)

Oylumoglu, G.

2005-01-01

In this study variation of additional enthalpy with respect to pH has been investigated by the statistical mechanical methods.. To bring up the additional effect, the partition function of the proteins are calculated by single protein molecule approximation. From the partition function, free energies of the proteins are obtained and by this way additional free energy has been used in the calculation of the terms in the thermodynamical quantity. Additional enthalpy H D has been obtained by taking effective electric field E and constant dipole moment M as thermodynamical variables and using Maxwell Equations. In the presented semi phenomenological theory, necessary data are taken from the experimental study of P.L. Privalov. The variation in the additional enthalpy H D has been investigated in the pH interval of 1-5 and the results of the calculations are discussed for Lysozyme

Time-dependent reliability sensitivity analysis of motion mechanisms

International Nuclear Information System (INIS)

Wei, Pengfei; Song, Jingwen; Lu, Zhenzhou; Yue, Zhufeng

2016-01-01

Reliability sensitivity analysis aims at identifying the source of structure/mechanism failure, and quantifying the effects of each random source or their distribution parameters on failure probability or reliability. In this paper, the time-dependent parametric reliability sensitivity (PRS) analysis as well as the global reliability sensitivity (GRS) analysis is introduced for the motion mechanisms. The PRS indices are defined as the partial derivatives of the time-dependent reliability w.r.t. the distribution parameters of each random input variable, and they quantify the effect of the small change of each distribution parameter on the time-dependent reliability. The GRS indices are defined for quantifying the individual, interaction and total contributions of the uncertainty in each random input variable to the time-dependent reliability. The envelope function method combined with the first order approximation of the motion error function is introduced for efficiently estimating the time-dependent PRS and GRS indices. Both the time-dependent PRS and GRS analysis techniques can be especially useful for reliability-based design. This significance of the proposed methods as well as the effectiveness of the envelope function method for estimating the time-dependent PRS and GRS indices are demonstrated with a four-bar mechanism and a car rack-and-pinion steering linkage. - Highlights: • Time-dependent parametric reliability sensitivity analysis is presented. • Time-dependent global reliability sensitivity analysis is presented for mechanisms. • The proposed method is especially useful for enhancing the kinematic reliability. • An envelope method is introduced for efficiently implementing the proposed methods. • The proposed method is demonstrated by two real planar mechanisms.

Some remarks on variational and quasi-variational inequalities of monotone operators

International Nuclear Information System (INIS)

Siddiqi, A.H.

1990-08-01

In this paper we study a fairly general class of variational and quasi-variational inequalities problem which represent some important physical phenomena. Several well-known results concerning variational inequalities are special cases of our results. Existence, uniqueness and numerical analysis of this problem have been studied. (author). 39 refs

Adaptive divergence despite strong genetic drift: genomic analysis of the evolutionary mechanisms causing genetic differentiation in the island fox (Urocyon littoralis)

Science.gov (United States)

FUNK, W. CHRIS; LOVICH, ROBERT E.; HOHENLOHE, PAUL A.; HOFMAN, COURTNEY A.; MORRISON, SCOTT A.; SILLETT, T. SCOTT; GHALAMBOR, CAMERON K.; MALDONADO, JESUS E.; RICK, TORBEN C.; DAY, MITCH D.; POLATO, NICHOLAS R.; FITZPATRICK, SARAH W.; COONAN, TIMOTHY J.; CROOKS, KEVIN R.; DILLON, ADAM; GARCELON, DAVID K.; KING, JULIE L.; BOSER, CHRISTINA L.; GOULD, NICHOLAS; ANDELT, WILLIAM F.

2016-01-01

The evolutionary mechanisms generating the tremendous biodiversity of islands have long fascinated evolutionary biologists. Genetic drift and divergent selection are predicted to be strong on islands and both could drive population divergence and speciation. Alternatively, strong genetic drift may preclude adaptation. We conducted a genomic analysis to test the roles of genetic drift and divergent selection in causing genetic differentiation among populations of the island fox (Urocyon littoralis). This species consists of 6 subspecies, each of which occupies a different California Channel Island. Analysis of 5293 SNP loci generated using Restriction-site Associated DNA (RAD) sequencing found support for genetic drift as the dominant evolutionary mechanism driving population divergence among island fox populations. In particular, populations had exceptionally low genetic variation, small Ne (range = 2.1–89.7; median = 19.4), and significant genetic signatures of bottlenecks. Moreover, islands with the lowest genetic variation (and, by inference, the strongest historical genetic drift) were most genetically differentiated from mainland gray foxes, and vice versa, indicating genetic drift drives genome-wide divergence. Nonetheless, outlier tests identified 3.6–6.6% of loci as high FST outliers, suggesting that despite strong genetic drift, divergent selection contributes to population divergence. Patterns of similarity among populations based on high FST outliers mirrored patterns based on morphology, providing additional evidence that outliers reflect adaptive divergence. Extremely low genetic variation and small Ne in some island fox populations, particularly on San Nicolas Island, suggest that they may be vulnerable to fixation of deleterious alleles, decreased fitness, and reduced adaptive potential. PMID:26992010

Adaptive divergence despite strong genetic drift: genomic analysis of the evolutionary mechanisms causing genetic differentiation in the island fox (Urocyon littoralis).

Science.gov (United States)

Funk, W Chris; Lovich, Robert E; Hohenlohe, Paul A; Hofman, Courtney A; Morrison, Scott A; Sillett, T Scott; Ghalambor, Cameron K; Maldonado, Jesus E; Rick, Torben C; Day, Mitch D; Polato, Nicholas R; Fitzpatrick, Sarah W; Coonan, Timothy J; Crooks, Kevin R; Dillon, Adam; Garcelon, David K; King, Julie L; Boser, Christina L; Gould, Nicholas; Andelt, William F

2016-05-01

The evolutionary mechanisms generating the tremendous biodiversity of islands have long fascinated evolutionary biologists. Genetic drift and divergent selection are predicted to be strong on islands and both could drive population divergence and speciation. Alternatively, strong genetic drift may preclude adaptation. We conducted a genomic analysis to test the roles of genetic drift and divergent selection in causing genetic differentiation among populations of the island fox (Urocyon littoralis). This species consists of six subspecies, each of which occupies a different California Channel Island. Analysis of 5293 SNP loci generated using Restriction-site Associated DNA (RAD) sequencing found support for genetic drift as the dominant evolutionary mechanism driving population divergence among island fox populations. In particular, populations had exceptionally low genetic variation, small Ne (range = 2.1-89.7; median = 19.4), and significant genetic signatures of bottlenecks. Moreover, islands with the lowest genetic variation (and, by inference, the strongest historical genetic drift) were most genetically differentiated from mainland grey foxes, and vice versa, indicating genetic drift drives genome-wide divergence. Nonetheless, outlier tests identified 3.6-6.6% of loci as high FST outliers, suggesting that despite strong genetic drift, divergent selection contributes to population divergence. Patterns of similarity among populations based on high FST outliers mirrored patterns based on morphology, providing additional evidence that outliers reflect adaptive divergence. Extremely low genetic variation and small Ne in some island fox populations, particularly on San Nicolas Island, suggest that they may be vulnerable to fixation of deleterious alleles, decreased fitness and reduced adaptive potential. © 2016 John Wiley & Sons Ltd.

Comparison of measurements from optical CMM and focus-variation microscope of a μPIM mechanical part

DEFF Research Database (Denmark)

Quagliotti, Danilo; Salaga, Jacek; Tosello, Guido

2016-01-01

Two sets of 5 green and 5 sintered mechanical parts, manufactured by micro powder injection moulding (μPIM), were measured using an optical coordinate measuring machine (OCMM) and a focus-variation microscope (FVM). The examined features of size, including diameter, radii and distances, span...... geometrical features, such as surface texture and flatness, may depict FVM measurements as more attractive. However, measurements should be suitable for in-line quality control, in a production environment, where fast cycle time is required and measuring times are more compatible to those of the OCMM....

Role of regression analysis and variation of rheological data in calculation of pressure drop for sludge pipelines.

Science.gov (United States)

Farno, E; Coventry, K; Slatter, P; Eshtiaghi, N

2018-06-15

Sludge pumps in wastewater treatment plants are often oversized due to uncertainty in calculation of pressure drop. This issue costs millions of dollars for industry to purchase and operate the oversized pumps. Besides costs, higher electricity consumption is associated with extra CO 2 emission which creates huge environmental impacts. Calculation of pressure drop via current pipe flow theory requires model estimation of flow curve data which depends on regression analysis and also varies with natural variation of rheological data. This study investigates impact of variation of rheological data and regression analysis on variation of pressure drop calculated via current pipe flow theories. Results compare the variation of calculated pressure drop between different models and regression methods and suggest on the suitability of each method. Copyright © 2018 Elsevier Ltd. All rights reserved.

Current understanding of the driving mechanisms for spatiotemporal variations of atmospheric speciated mercury: a review

Directory of Open Access Journals (Sweden)

H. Mao

2016-10-01

Full Text Available Atmospheric mercury (Hg is a global pollutant and thought to be the main source of mercury in oceanic and remote terrestrial systems, where it becomes methylated and bioavailable; hence, atmospheric mercury pollution has global consequences for both human and ecosystem health. Understanding of spatial and temporal variations of atmospheric speciated mercury can advance our knowledge of mercury cycling in various environments. This review summarized spatiotemporal variations of total gaseous mercury or gaseous elemental mercury (TGM/GEM, gaseous oxidized mercury (GOM, and particulate-bound mercury (PBM in various environments including oceans, continents, high elevation, the free troposphere, and low to high latitudes. In the marine boundary layer (MBL, the oxidation of GEM was generally thought to drive the diurnal and seasonal variations of TGM/GEM and GOM in most oceanic regions, leading to lower GEM and higher GOM from noon to afternoon and higher GEM during winter and higher GOM during spring–summer. At continental sites, the driving mechanisms of TGM/GEM diurnal patterns included surface and local emissions, boundary layer dynamics, GEM oxidation, and for high-elevation sites mountain–valley winds, while oxidation of GEM and entrainment of free tropospheric air appeared to control the diurnal patterns of GOM. No pronounced diurnal variation was found for Tekran measured PBM at MBL and continental sites. Seasonal variations in TGM/GEM at continental sites were attributed to increased winter combustion and summertime surface emissions, and monsoons in Asia, while those in GOM were controlled by GEM oxidation, free tropospheric transport, anthropogenic emissions, and wet deposition. Increased PBM at continental sites during winter was primarily due to local/regional coal and wood combustion emissions. Long-term TGM measurements from the MBL and continental sites indicated an overall declining trend. Limited measurements suggested TGM

Current understanding of the driving mechanisms for spatiotemporal variations of atmospheric speciated mercury: a review

Science.gov (United States)

Mao, Huiting; Cheng, Irene; Zhang, Leiming

2016-10-01

Atmospheric mercury (Hg) is a global pollutant and thought to be the main source of mercury in oceanic and remote terrestrial systems, where it becomes methylated and bioavailable; hence, atmospheric mercury pollution has global consequences for both human and ecosystem health. Understanding of spatial and temporal variations of atmospheric speciated mercury can advance our knowledge of mercury cycling in various environments. This review summarized spatiotemporal variations of total gaseous mercury or gaseous elemental mercury (TGM/GEM), gaseous oxidized mercury (GOM), and particulate-bound mercury (PBM) in various environments including oceans, continents, high elevation, the free troposphere, and low to high latitudes. In the marine boundary layer (MBL), the oxidation of GEM was generally thought to drive the diurnal and seasonal variations of TGM/GEM and GOM in most oceanic regions, leading to lower GEM and higher GOM from noon to afternoon and higher GEM during winter and higher GOM during spring-summer. At continental sites, the driving mechanisms of TGM/GEM diurnal patterns included surface and local emissions, boundary layer dynamics, GEM oxidation, and for high-elevation sites mountain-valley winds, while oxidation of GEM and entrainment of free tropospheric air appeared to control the diurnal patterns of GOM. No pronounced diurnal variation was found for Tekran measured PBM at MBL and continental sites. Seasonal variations in TGM/GEM at continental sites were attributed to increased winter combustion and summertime surface emissions, and monsoons in Asia, while those in GOM were controlled by GEM oxidation, free tropospheric transport, anthropogenic emissions, and wet deposition. Increased PBM at continental sites during winter was primarily due to local/regional coal and wood combustion emissions. Long-term TGM measurements from the MBL and continental sites indicated an overall declining trend. Limited measurements suggested TGM/GEM increasing from the

Classical mechanics with calculus of variations and optimal control an intuitive introduction

CERN Document Server

Levi, Mark

2014-01-01

This is an intuitively motivated presentation of many topics in classical mechanics and related areas of control theory and calculus of variations. All topics throughout the book are treated with zero tolerance for unrevealing definitions and for proofs which leave the reader in the dark. Some areas of particular interest are: an extremely short derivation of the ellipticity of planetary orbits; a statement and an explanation of the "tennis racket paradox"; a heuristic explanation (and a rigorous treatment) of the gyroscopic effect; a revealing equivalence between the dynamics of a particle and statics of a spring; a short geometrical explanation of Pontryagin's Maximum Principle, and more. In the last chapter, aimed at more advanced readers, the Hamiltonian and the momentum are compared to forces in a certain static problem. This gives a palpable physical meaning to some seemingly abstract concepts and theorems. With minimal prerequisites consisting of basic calculus and basic undergraduate physics, this boo...

Identifying the factors influencing practice variation in thrombosis medicine: A qualitative content analysis of published practice-pattern surveys.

Science.gov (United States)

Skeith, Leslie; Gonsalves, Carol

2017-11-01

Practice variation, the differences in clinical management between physicians, is one reason why patient outcomes may differ. Identifying factors that contribute to practice variation in areas of clinical uncertainty or equipoise may have implications for understanding and improving patient care. To discern what factors may influence practice variation, we completed a qualitative content analysis of all practice-pattern surveys in thrombosis medicine in the last 10years. Out of 2117 articles screened using a systematic search strategy, 33 practice-pattern surveys met eligibility criteria. Themes were identified using constant comparative analysis of qualitative data. Practice variation was noted in all 33 practice-pattern surveys. Contributing factors to variation included lack of available evidence, lack of clear and specific guideline recommendations, past experience, patient context, institutional culture and the perceived risk and benefit of a particular treatment. Additional themes highlight the value placed on expertise in challenging clinical scenarios, the complexity of practice variation and the value placed on minimizing practice variation. Copyright © 2017 Elsevier Ltd. All rights reserved.

Mechanism and Effect of Temperature on Variations in Antibiotic Resistance Genes during Anaerobic Digestion of Dairy Manure

Science.gov (United States)

Sun, Wei; Qian, Xun; Gu, Jie; Wang, Xiao-Juan; Duan, Man-Li

2016-01-01

Animal manure comprises an important reservoir for antibiotic resistance genes (ARGs), but the variation in ARGs during anaerobic digestion at various temperatures and its underlying mechanism remain unclear. Thus, we performed anaerobic digestion using dairy manure at three temperature levels (moderate: 20 °C, mesophilic: 35 °C, and thermophilic: 55 °C), to analyze the dynamics of ARGs and bacterial communities by quantitative PCR and 16S rRNA gene sequencing. We found that 8/10 detected ARGs declined and 5/10 decreased more than 1.0 log during thermophilic digestion, whereas only four and five ARGs decreased during moderate and mesophilic digestion, respectively. The changes in ARGs and bacterial communities were similar under the moderate and mesophilic treatments, but distinct from those in the thermophilic system. Potential pathogens such as Bacteroidetes, Proteobacteria, and Corynebacterium were removed by thermophilic digestion but not by moderate and mesophilic digestion. The bacterial community succession was the dominant mechanism that influenced the variation in ARGs and integrons during anaerobic digestion. Thermophilic digestion decreased the amount of mesophilic bacteria (Bacteroidetes and Proteobacteria) carrying ARGs. Anaerobic digestion generally decreased the abundance of integrons by eliminating the aerobic hosts of integrons (Actinomycetales and Bacilli). Thermophilic anaerobic digestion is recommended for the treatment and reuse of animal manure. PMID:27444518

Mechanical Stress Downregulates MHC Class I Expression on Human Cancer Cell Membrane

KAUST Repository

La Rocca, Rosanna; Tallerico, Rossana; Talib Hassan, Almosawy; Das, Gobind; Tadepally, Lakshmikanth; Matteucci, Marco; Liberale, Carlo; Mesuraca, Maria; Scumaci, Domenica; Gentile, Francesco; Cojoc, Gheorghe; Perozziello, Gerardo; Ammendolia, Antonio; Gallo, Adriana; Kä rre, Klas; Cuda, Giovanni; Candeloro, Patrizio; Di Fabrizio, Enzo M.; Carbone, Ennio

2014-01-01

bar (1 bar = 100.000 Pascal), depending on the devices used. Moreover, Raman spectroscopy analysis, after mechanical treatment, in the range between 700–1800 cm−1, indicated a relative concentration variation of MHC class I. PCA analysis was also

Optimized variational analysis scheme of single Doppler radar wind data

Science.gov (United States)

Sasaki, Yoshi K.; Allen, Steve; Mizuno, Koki; Whitehead, Victor; Wilk, Kenneth E.

1989-01-01

A computer scheme for extracting singularities has been developed and applied to single Doppler radar wind data. The scheme is planned for use in real-time wind and singularity analysis and forecasting. The method, known as Doppler Operational Variational Extraction of Singularities is outlined, focusing on the principle of local symmetry. Results are presented from the application of the scheme to a storm-generated gust front in Oklahoma on May 28, 1987.

Quantitative measurement of phase variation amplitude of ultrasonic diffraction grating based on diffraction spectral analysis

Energy Technology Data Exchange (ETDEWEB)

Pan, Meiyan, E-mail: yphantomohive@gmail.com; Zeng, Yingzhi; Huang, Zuohua, E-mail: zuohuah@163.com [Laboratory of Quantum Engineering and Quantum Materials, School of Physics and Telecommunication Engineering, South China Normal University, Guangzhou, Guangdong 510006 (China)

2014-09-15

A new method based on diffraction spectral analysis is proposed for the quantitative measurement of the phase variation amplitude of an ultrasonic diffraction grating. For a traveling wave, the phase variation amplitude of the grating depends on the intensity of the zeroth- and first-order diffraction waves. By contrast, for a standing wave, this amplitude depends on the intensity of the zeroth-, first-, and second-order diffraction waves. The proposed method is verified experimentally. The measured phase variation amplitude ranges from 0 to 2π, with a relative error of approximately 5%. A nearly linear relation exists between the phase variation amplitude and driving voltage. Our proposed method can also be applied to ordinary sinusoidal phase grating.

Variation in recombination frequency and distribution across eukaryotes: patterns and processes

Science.gov (United States)

Feulner, Philine G. D.; Johnston, Susan E.; Santure, Anna W.; Smadja, Carole M.

2017-01-01

Recombination, the exchange of DNA between maternal and paternal chromosomes during meiosis, is an essential feature of sexual reproduction in nearly all multicellular organisms. While the role of recombination in the evolution of sex has received theoretical and empirical attention, less is known about how recombination rate itself evolves and what influence this has on evolutionary processes within sexually reproducing organisms. Here, we explore the patterns of, and processes governing recombination in eukaryotes. We summarize patterns of variation, integrating current knowledge with an analysis of linkage map data in 353 organisms. We then discuss proximate and ultimate processes governing recombination rate variation and consider how these influence evolutionary processes. Genome-wide recombination rates (cM/Mb) can vary more than tenfold across eukaryotes, and there is large variation in the distribution of recombination events across closely related taxa, populations and individuals. We discuss how variation in rate and distribution relates to genome architecture, genetic and epigenetic mechanisms, sex, environmental perturbations and variable selective pressures. There has been great progress in determining the molecular mechanisms governing recombination, and with the continued development of new modelling and empirical approaches, there is now also great opportunity to further our understanding of how and why recombination rate varies. This article is part of the themed issue ‘Evolutionary causes and consequences of recombination rate variation in sexual organisms’. PMID:29109219

Time dependent variational method in quantum mechanics

International Nuclear Information System (INIS)

Torres del Castillo, G.F.

1987-01-01

Using the fact that the solutions to the time-dependent Schodinger equation can be obtained from a variational principle, by restricting the evolution of the state vector to some surface in the corresponding Hilbert space, approximations to the exact solutions can be obtained, which are determined by equations similar to Hamilton's equations. It is shown that, in order for the approximate evolution to be well defined on a given surface, the imaginary part of the inner product restricted to the surface must be non-singular. (author)

Analysis of Links Positions in Landing Gear Mechanism

Science.gov (United States)

Brewczyński, D.; Tora, G.

2014-08-01

This article contains a kinematic analysis of an aircraft chassis mechanism in a range of positions. The mechanism of the chassis is made up of several smaller subsystems with different functions. The first mechanism is used to eject the chassis before landing (touchdown) and fold it to hatchway after the lift off. The second mechanism is designed to perform rotation of the crossover with the wheel, in order to adjust the position of the wheel to fit it in the limited space in the hold. The third mechanism allows movement of the chassis resulting from the change in length of the damper. To determine the position of the following links of the mechanism calculus of vectors was applied in which unit vectors were used to represent the angular position of the links. The aim of the analysis is to determine the angle of convergence and the angle of heel wheels as a function of the variable length of hydraulic cylinder, length of the shock absorber, length of the regulations rods

Dynamic mechanical analysis of carbon nanotube-reinforced nanocomposites.

Science.gov (United States)

Her, Shiuh-Chuan; Lin, Kuan-Yu

2017-06-16

To predict the mechanical properties of multiwalled carbon nanotube (MWCNT)-reinforced polymers, it is necessary to understand the role of the nanotube-polymer interface with regard to load transfer and the formation of the interphase region. The main objective of this study was to explore and attempt to clarify the reinforcement mechanisms of MWCNTs in epoxy matrix. Nanocomposites were fabricated by adding different amounts of MWCNTs to epoxy resin. Tensile test and dynamic mechanical analysis (DMA) were conducted to investigate the effect of MWCNT contents on the mechanical properties and thermal stability of nanocomposites. Compared with the neat epoxy, nanocomposite reinforced with 1 wt% of MWCNTs exhibited an increase of 152% and 54% in Young's modulus and tensile strength, respectively. Dynamic mechanical analysis demonstrates that both the storage modulus and glass transition temperature tend to increase with the addition of MWCNTs. Scanning electron microscopy (SEM) observations reveal that uniform dispersion and strong interfacial adhesion between the MWCNTs and epoxy are achieved, resulting in the improvement of mechanical properties and thermal stability as compared with neat epoxy.

Fourier transform infrared imaging microspectroscopy and tissue-level mechanical testing reveal intraspecies variation in mouse bone mineral and matrix composition.

Science.gov (United States)

Courtland, Hayden-William; Nasser, Philip; Goldstone, Andrew B; Spevak, Lyudmila; Boskey, Adele L; Jepsen, Karl J

2008-11-01

Fracture susceptibility is heritable and dependent upon bone morphology and quality. However, studies of bone quality are typically overshadowed by emphasis on bone geometry and bone mineral density. Given that differences in mineral and matrix composition exist in a variety of species, we hypothesized that genetic variation in bone quality and tissue-level mechanical properties would also exist within species. Sixteen-week-old female A/J, C57BL/6J (B6), and C3H/HeJ (C3H) inbred mouse femora were analyzed using Fourier transform infrared imaging and tissue-level mechanical testing for variation in mineral composition, mineral maturity, collagen cross-link ratio, and tissue-level mechanical properties. A/J femora had an increased mineral-to-matrix ratio compared to B6. The C3H mineral-to-matrix ratio was intermediate of A/J and B6. C3H femora had reduced acid phosphate and carbonate levels and an increased collagen cross-link ratio compared to A/J and B6. Modulus values paralleled mineral-to-matrix values, with A/J femora being the most stiff, B6 being the least stiff, and C3H having intermediate stiffness. In addition, work-to-failure varied among the strains, with the highly mineralized and brittle A/J femora performing the least amount of work-to-failure. Inbred mice are therefore able to differentially modulate the composition of their bone mineral and the maturity of their bone matrix in conjunction with tissue-level mechanical properties. These results suggest that specific combinations of bone quality and morphological traits are genetically regulated such that mechanically functional bones can be constructed in different ways.

SU-E-T-139: Automated Daily EPID Exit Dose Analysis Uncovers Treatment Variations

Energy Technology Data Exchange (ETDEWEB)

Olch, A [University of Southern California, Los Angeles, CA (United States)

2015-06-15

Purpose: To evaluate a fully automated EPID exit dose system for its ability to detect daily treatment deviations including patient setup, delivery, and anatomy changes. Methods: PerFRACTION (Sun Nuclear Corporation) software is a system that uses integrated EPID images taken during patient treatment and automatically pulled from the Aria database and analyzed based on user-defined comparisons. This was used to monitor 20 plans consisting of a total of 859 fields for 18 patients, for a total of 251 fractions. Nine VMAT, 5 IMRT, and 6 3D plans were monitored. The Gamma analysis was performed for each field within a plan, comparing the first fraction against each of the other fractions in each treatment course. A 2% dose difference, 1 mm distance-to-agreement, and 10% dose threshold was used. These tight tolerances were chosen to achieve a high sensitivity to treatment variations. The field passed if 93% of the pixels had a Gamma of 1 or less. Results: Twenty-nine percent of the fields failed. The average plan passing rate was 92.5%.The average 3D plan passing rate was less than for VMAT or IMRT, 84%, vs. an average of 96.2%. When fields failed, an investigation revealed changes in patient anatomy or setup variations, often also leading to variations of transmission through immobilization devices. Conclusion: PerFRACTION is a fully automated system for determining daily changes in dose transmission through the patient that requires no effort other than for the imager panel to be deployed during treatment. A surprising number of fields failed the analysis and can be attributed to important treatment variations that would otherwise not be appreciated. Further study of inter-fraction treatment variations is possible and warranted. Sun Nuclear Corporation provided a license to the software described.

Handbook of mathematical analysis in mechanics of viscous fluids

CERN Document Server

Novotný, Antonín

2018-01-01

Mathematics has always played a key role for researches in fluid mechanics. The purpose of this handbook is to give an overview of items that are key to handling problems in fluid mechanics. Since the field of fluid mechanics is huge, it is almost impossible to cover many topics. In this handbook, we focus on mathematical analysis on viscous Newtonian fluid. The first part is devoted to mathematical analysis on incompressible fluids while part 2 is devoted to compressible fluids.

Variation in the human ribs geometrical properties and mechanical response based on X-ray computed tomography images resolution.

Science.gov (United States)

Perz, Rafał; Toczyski, Jacek; Subit, Damien

2015-01-01

Computational models of the human body are commonly used for injury prediction in automobile safety research. To create these models, the geometry of the human body is typically obtained from segmentation of medical images such as computed tomography (CT) images that have a resolution between 0.2 and 1mm/pixel. While the accuracy of the geometrical and structural information obtained from these images depend greatly on their resolution, the effect of image resolution on the estimation of the ribs geometrical properties has yet to be established. To do so, each of the thirty-four sections of ribs obtained from a Post Mortem Human Surrogate (PMHS) was imaged using three different CT modalities: standard clinical CT (clinCT), high resolution clinical CT (HRclinCT), and microCT. The images were processed to estimate the rib cross-section geometry and mechanical properties, and the results were compared to those obtained from the microCT images by computing the 'deviation factor', a metric that quantifies the relative difference between results obtained from clinCT and HRclinCT to those obtained from microCT. Overall, clinCT images gave a deviation greater than 100%, and were therefore deemed inadequate for the purpose of this study. HRclinCT overestimated the rib cross-sectional area by 7.6%, the moments of inertia by about 50%, and the cortical shell area by 40.2%, while underestimating the trabecular area by 14.7%. Next, a parametric analysis was performed to quantify how the variations in the estimate of the geometrical properties affected the rib predicted mechanical response under antero-posterior loading. A variation of up to 45% for the predicted peak force and up to 50% for the predicted stiffness was observed. These results provide a quantitative estimate of the sensitivity of the response of the FE model to the resolution of the images used to generate it. They also suggest that a correction factor could be derived from the comparison between microCT and

Effects of prolonged compression on the variations of haemoglobin oxygenation-assessment by spectral analysis of reflectance spectrophotometry signals

International Nuclear Information System (INIS)

Li, Zengyong; Tam, Eric W C; Mak, Arthur F T; Lau, Roy Y C

2006-01-01

The consequences of rhythmical flow motion for nutrition and the oxygen supply to tissue are largely unknown. In this study, the periodic variations of haemoglobin oxygenation in compressed and uncompressed skin were evaluated with a reflection spectrometer using an in vivo Sprague-Dawley rat model. Skin compression was induced over the trochanter area by a locally applied external pressure of 13.3 kPa (100 mmHg) via a specifically designed pneumatic indentor. A total of 19 rats were used in this study. The loading duration is 6 h per day for four consecutive days. Haemoglobin oxygenation variations were quantified using spectral analysis based on wavelets' transformation. The results found that in both compressed and uncompressed skin, periodic variations of the haemoglobin oxygenation were characterized by two frequencies in the range of 0.01-0.05 Hz and 0.15-0.4 Hz. These frequency ranges coincide with those of the frequency range of the endothelial-related metabolic and myogenic activities found in the flow motion respectively. Tissue compression following the above loading schedule induced a significant decrease in the spectral amplitudes of frequency interval 0.01-0.05 Hz during the pre-occlusion period on day 3 and day 4 as compared to that on day 1 (p 2 consumption rates of arteriolar walls. The modification of vessel wall oxygen consumption might substantially affect the available oxygen supply to the compressed tissue. This mechanism might be involved in the process leading to pressure ulcer formation

Inverse Transient Analysis for Classification of Wall Thickness Variations in Pipelines

Directory of Open Access Journals (Sweden)

Jeffrey Tuck

2013-12-01

Full Text Available Analysis of transient fluid pressure signals has been investigated as an alternative method of fault detection in pipeline systems and has shown promise in both laboratory and field trials. The advantage of the method is that it can potentially provide a fast and cost effective means of locating faults such as leaks, blockages and pipeline wall degradation within a pipeline while the system remains fully operational. The only requirement is that high speed pressure sensors are placed in contact with the fluid. Further development of the method requires detailed numerical models and enhanced understanding of transient flow within a pipeline where variations in pipeline condition and geometry occur. One such variation commonly encountered is the degradation or thinning of pipe walls, which can increase the susceptible of a pipeline to leak development. This paper aims to improve transient-based fault detection methods by investigating how changes in pipe wall thickness will affect the transient behaviour of a system; this is done through the analysis of laboratory experiments. The laboratory experiments are carried out on a stainless steel pipeline of constant outside diameter, into which a pipe section of variable wall thickness is inserted. In order to detect the location and severity of these changes in wall conditions within the laboratory system an inverse transient analysis procedure is employed which considers independent variations in wavespeed and diameter. Inverse transient analyses are carried out using a genetic algorithm optimisation routine to match the response from a one-dimensional method of characteristics transient model to the experimental time domain pressure responses. The accuracy of the detection technique is evaluated and benefits associated with various simplifying assumptions and simulation run times are investigated. It is found that for the case investigated, changes in the wavespeed and nominal diameter of the

Inverse Transient Analysis for Classification of Wall Thickness Variations in Pipelines

Science.gov (United States)

Tuck, Jeffrey; Lee, Pedro

2013-01-01

Analysis of transient fluid pressure signals has been investigated as an alternative method of fault detection in pipeline systems and has shown promise in both laboratory and field trials. The advantage of the method is that it can potentially provide a fast and cost effective means of locating faults such as leaks, blockages and pipeline wall degradation within a pipeline while the system remains fully operational. The only requirement is that high speed pressure sensors are placed in contact with the fluid. Further development of the method requires detailed numerical models and enhanced understanding of transient flow within a pipeline where variations in pipeline condition and geometry occur. One such variation commonly encountered is the degradation or thinning of pipe walls, which can increase the susceptible of a pipeline to leak development. This paper aims to improve transient-based fault detection methods by investigating how changes in pipe wall thickness will affect the transient behaviour of a system; this is done through the analysis of laboratory experiments. The laboratory experiments are carried out on a stainless steel pipeline of constant outside diameter, into which a pipe section of variable wall thickness is inserted. In order to detect the location and severity of these changes in wall conditions within the laboratory system an inverse transient analysis procedure is employed which considers independent variations in wavespeed and diameter. Inverse transient analyses are carried out using a genetic algorithm optimisation routine to match the response from a one-dimensional method of characteristics transient model to the experimental time domain pressure responses. The accuracy of the detection technique is evaluated and benefits associated with various simplifying assumptions and simulation run times are investigated. It is found that for the case investigated, changes in the wavespeed and nominal diameter of the pipeline are both important

Modeling and Analysis of Deformation for Spiral Bevel Gear in Die Quenching Based on the Hardenability Variation

Science.gov (United States)

Zhang, Yingtao; Wang, Gang; Shi, Wankai; Yang, Lin; Li, Zhichao

2017-07-01

Spiral bevel gears are widely used to transmit energy between intersecting axes. The strength and fatigue life of the gears are improved by carburizing and quenching. A die quenching process is used to control the deformation of the gear. The deformation is determined by the variations in the hardenability for a certain die quenching process. The relationship between hardenability, phase transformation and deformation needs to be studied to minimize deformation during the adjustment of the die quenching process parameters. In this paper, material properties for 22CrMoH steel are determined by the results of Jominy tests, dilatometry experiments and static mechanical property tests. The material models were built based on testing results under the consideration of hardenability variation. An finite element analysis model was developed to couple the phase transformation and deformation history of the complete carburizing and die quenching process for the spiral bevel gears. The final microstructures in the gear were bainite for low hardenability steel and a mixture of bainite and ferrite for high hardenability steel. The largest buckling deformation at the gear bottom surface is 0.375 mm at the outer circle for the low hardenability gear and 0.091 mm at the inner circle for the high hardenability gear.

Is there much variation in variation? Revisiting statistics of small area variation in health services research

Directory of Open Access Journals (Sweden)

Ibáñez Berta

2009-04-01

Full Text Available Abstract Background The importance of Small Area Variation Analysis for policy-making contrasts with the scarcity of work on the validity of the statistics used in these studies. Our study aims at 1 determining whether variation in utilization rates between health areas is higher than would be expected by chance, 2 estimating the statistical power of the variation statistics; and 3 evaluating the ability of different statistics to compare the variability among different procedures regardless of their rates. Methods Parametric bootstrap techniques were used to derive the empirical distribution for each statistic under the hypothesis of homogeneity across areas. Non-parametric procedures were used to analyze the empirical distribution for the observed statistics and compare the results in six situations (low/medium/high utilization rates and low/high variability. A small scale simulation study was conducted to assess the capacity of each statistic to discriminate between different scenarios with different degrees of variation. Results Bootstrap techniques proved to be good at quantifying the difference between the null hypothesis and the variation observed in each situation, and to construct reliable tests and confidence intervals for each of the variation statistics analyzed. Although the good performance of Systematic Component of Variation (SCV, Empirical Bayes (EB statistic shows better behaviour under the null hypothesis, it is able to detect variability if present, it is not influenced by the procedure rate and it is best able to discriminate between different degrees of heterogeneity. Conclusion The EB statistics seems to be a good alternative to more conventional statistics used in small-area variation analysis in health service research because of its robustness.

Gyarmati’s Variational Principle of Dissipative Processes

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József Verhás

2014-04-01

Full Text Available Like in mechanics and electrodynamics, the fundamental laws of the thermodynamics of dissipative processes can be compressed into Gyarmati’s variational principle. This variational principle both in its differential (local and in integral (global forms was formulated by Gyarmati in 1965. The consistent application of both the local and the global forms of Gyarmati’s principle provides all the advantages throughout explicating the theory of irreversible thermodynamics that are provided in the study of mechanics and electrodynamics by the corresponding classical variational principles, e.g., Gauss’ differential principle of least constraint or Hamilton’s integral principle.

GIDL analysis of the process variation effect in gate-all-around nanowire FET

Science.gov (United States)

Kim, Shinkeun; Seo, Youngsoo; Lee, Jangkyu; Kang, Myounggon; Shin, Hyungcheol

2018-02-01

In this paper, the gate-induced drain leakage (GIDL) is analyzed on gate-all-around (GAA) Nanowire FET (NW FET) with ellipse-shaped channel induced by process variation effect (PVE). The fabrication process of nanowire can lead to change the shape of channel cross section from circle to ellipse. The effect of distorted channel shape is investigated and verified by technology computer-aided design (TCAD) simulation in terms of the GIDL current. The simulation results demonstrate that the components of GIDL current are two mechanisms of longitudinal band-to-band tunneling (L-BTBT) at body/drain junction and transverse band-to-band tunneling (T-BTBT) at gate/drain junction. These two mechanisms are investigated on channel radius (rnw) and aspect ratio of ellipse-shape respectively and together.

AFLP and MS-AFLP analysis of the variation within saffron crocus (Crocus sativus L. germplasm.

Directory of Open Access Journals (Sweden)

Matteo Busconi

Full Text Available The presence and extent of genetic variation in saffron crocus are still debated, as testified by several contradictory articles providing contrasting results about the monomorphism or less of the species. Remarkably, phenotypic variations have been frequently observed in the field, such variations are usually unstable and can change from one growing season to another. Considering that gene expression can be influenced both by genetic and epigenetic changes, epigenetics could be a plausible cause of the alternative phenotypes. In order to obtain new insights into this issue, we carried out a molecular marker analysis of 112 accessions from the World Saffron and Crocus Collection. The accessions were grown for at least three years in the same open field conditions. The same samples were analysed using Amplified Fragment Length Polymorphism (AFLP and Methyl Sensitive AFLP in order to search for variation at the genetic (DNA sequence and epigenetic (cytosine methylation level. While the genetic variability was low (4.23% polymorphic peaks and twelve (12 effective different genotypes, the methyl sensitive analysis showed the presence of high epigenetic variability (33.57% polymorphic peaks and twenty eight (28 different effective epigenotypes. The pattern obtained by Factorial Correspondence Analysis of AFLP and, in particular, of MS-AFLP data was consistent with the geographical provenance of the accessions. Very interestingly, by focusing on Spanish accessions, it was observed that the distribution of the accessions in the Factorial Correspondence Analysis is not random but tends to reflect the geographical origin. Two clearly defined clusters grouping accessions from the West (Toledo and Ciudad Real and accessions from the East (Cuenca and Teruel were clearly recognised.

Continuum damage mechanics analysis of crack tip zone

International Nuclear Information System (INIS)

Yinchu, L.; Jianping, Z.

1989-01-01

The crack tip field and its intensity factor play an important role in fracture mechanics. Generally, the damage such as microcracks, microvoids etc. will initiate and grow in materials as the cracked body is subjected to external loadings, especially in the crack tip zone. The damage evolution will load to the crack tip damage field and the change of the stress, strain and displacement fields of cracks tip zone. In this paper, on the basis of continuum damage mechanics, the authors have derived the equations which the crack tip field and its intensity factor must satisfy in a loading process, calculated the angle distribution curves of stress, strain and displacement fields in a crack tip zone and have compared them with the corresponding curves of HRR field and linear elastic field in undamaged materials. The equations of crack tip field intensity factors have been solved and its solutions give the variation of the field intensity factors with the loading parameter

Effect of Nonlinearity by the Amplitude Variation in coherent transmission in Laser Heterodyne Interferometric

International Nuclear Information System (INIS)

Chen, H F; Ding, X M; Zhong, Z; Xie, Z L; Yue, H

2006-01-01

To reduce the nonlinearity of nanometer measurement in laser heterodyne interferometric, the influence mechanics of the amplitude variation in coherent transmission upon nonlinearity must be confirmed. Based on the mechanics of nonlinearity, the models about how first-harmonic and second-harmonic nonlinearity caused by the amplitude variation in coherent transmission are proposed. The emulation result shows that different amplitude between measurement arm and reference arm increases the first-harmonic nonlinearity when laser beams nonorthogonality errors exist, but it doesn't change the relationship between nonlinearity and half wavelength. When the rotation angle error β of polarizing beam splitter (PBS) exists, amplitude variation only affects the first-harmonic nonlinearity. With a constant rotation angle of PBS β = 4 0 , when the amplitude factor of measurement arm reduces from 1 to 0.6, the nonlinearity increases from 0.25 nm to 3.81 nm, and the nonlinearity is simple superposition of first-harmonic and second-harmonic. Theoretic analysis and emulation show that the reduction of amplitude variation in coherent transmission can reduce influence on nonlinearity

A mechanical energy analysis of gait initiation

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Miller, C. A.; Verstraete, M. C.

1999-01-01

The analysis of gait initiation (the transient state between standing and walking) is an important diagnostic tool to study pathologic gait and to evaluate prosthetic devices. While past studies have quantified mechanical energy of the body during steady-state gait, to date no one has computed the mechanical energy of the body during gait initiation. In this study, gait initiation in seven normal male subjects was studied using a mechanical energy analysis to compute total body energy. The data showed three separate states: quiet standing, gait initiation, and steady-state gait. During gait initiation, the trends in the energy data for the individual segments were similar to those seen during steady-state gait (and in Winter DA, Quanbury AO, Reimer GD. Analysis of instantaneous energy of normal gait. J Biochem 1976;9:253-257), but diminished in amplitude. However, these amplitudes increased to those seen in steady-state during the gait initiation event (GIE), with the greatest increase occurring in the second step due to the push-off of the foundation leg. The baseline level of mechanical energy was due to the potential energy of the individual segments, while the cyclic nature of the data was indicative of the kinetic energy of the particular leg in swing phase during that step. The data presented showed differences in energy trends during gait initiation from those of steady state, thereby demonstrating the importance of this event in the study of locomotion.

A Structural Analysis of a Mechanical Heart Valve Prosthesis with Flat Leaflet

Science.gov (United States)

Kwon, Young Joo

This paper addresses the basic concept of MDO methodology and the structural analysis that should be performed in the design process of a mechanical heart valve prosthesis with flat leaflet using MDO methodology. In the structural design of the mechanical heart valve (MHV) prosthesis, the fluid mechanics analysis is executed for the blood flow passing through the leaflets of a mechanical heart valve prosthesis. Thereafter, the rigid body dynamics analysis of the leaflet motion is performed to obtain the structural condition for the structural mechanics analysis of the deformed leaflet. Then the structural mechanics analysis of the deformed leaflet follows to confirm the minimum thickness of the leaflet for the structural durability of the mechanical heart valve prosthesis. This paper shows that the minimum leaflet thickness can be evaluated to be 0.6mm among the suggested thicknesses.

Analysis of Geomagnetic Field Variations during Total Solar Eclipses Using INTERMAGNET Data

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KIM, J. H.; Chang, H. Y.

2017-12-01

We investigate variations of the geomagnetic field observed by INTERMAGNET geomagnetic observatories over which the totality path passed during a solar eclipse. We compare results acquired by 6 geomagnetic observatories during the 4 total solar eclipses (11 August 1999, 1 August 2008, 11 July 2010, and 20 March 2015) in terms of geomagnetic and solar ecliptic parameters. These total solar eclipses are the only total solar eclipse during which the umbra of the moon swept an INTERMAGNET geomagnetic observatory and simultaneously variations of the geomagnetic field are recorded. We have confirmed previous studies that increase BY and decreases of BX, BZ and F are conspicuous. Interestingly, we have noted that variations of geomagnetic field components observed during the total solar eclipse at Isla de Pascua Mataveri (Easter Island) in Chile (IPM) in the southern hemisphere show distinct decrease of BY and increases of BX and BZ on the contrary. We have found, however, that variations of BX, BY, BZ and F observed at Hornsund in Norway (HRN) seem to be dominated by other geomagnetic occurrence. In addition, we have attempted to obtain any signatures of influence on the temporal behavior of the variation in the geomagnetic field signal during the solar eclipse by employing the wavelet analysis technique. Finally, we conclude by pointing out that despite apparent success a more sophisticate and reliable algorithm is required before implementing to make quantitative comparisons.

NDVI-Based analysis on the influence of human activities on vegetation variation on Hainan Island

Science.gov (United States)

Luo, Hongxia; Dai, Shengpei; Xie, Zhenghui; Fang, Jihua

2018-02-01

Using the Moderate Resolution Imaging Spectroradiometer-normalized difference vegetation index (NDVI) dataset, we analyzed the predicted NDVI values variation and the influence of human activities on vegetation on Hainan Island during 2001-2015. We investigated the roles of human activities in vegetation variation, particularly from 2002 when implemented the Grain-for-Greenprogram on Hainan Island. The trend analysis, linear regression model and residual analysis were used to analyze the data. The results of the study showed that (1) The predicted vegetation on Hainan Island showed an general upward trend with a linear growth rate of 0.0025/10y (phuman activities. (3) In general, human activities had played a positive role in the vegetation increase on Hainan Island, and the residual NDVI trend of this region showed positive outcomes for vegetation variation after implementing ecological engineering projects. However, it indicated a growing risk of vegetation degradation in the coastal region of Hainan Island as a result of rapid urbanization, land reclamation.

Magnitude of long-term non-lithostatic pressure variations in lithospheric processes: insight from thermo-mechanical subduction/collision models

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Gerya, Taras

2014-05-01

On the one hand, the principle of lithostatic pressure is habitually used in metamorphic geology to calculate paleo-depths of metamorphism from mineralogical pressure estimates given by geobarometry. On the other hand, it is obvious that this lithostatic (hydrostatic) pressure principle should only be valid for an ideal case of negligible deviatoric stresses during the long-term development of the entire tectono-metamorphic system - the situation, which newer comes to existence in natural lithospheric processes. The question is therefore not "Do non-lithostatic pressure variations exist?" but " What is the magnitude of long-term non-lithostatic pressure variations in various lithospheric processes, which can be recorded by mineral equilibria of respective metamorphic rocks?". The later question is, in particular, relevant for various types of high-pressure (HP) and ultrahigh-pressure (UHP) rocks, which are often produced in convergent plate boundary settings (e.g., Hacker and Gerya, 2013). This question, can, in particular, be answered with the use of thermo-mechanical models of subduction/collision processes employing realistic P-T-stress-dependent visco-elasto-brittle/plastic rheology of rocks. These models suggest that magnitudes of pressure deviations from lithostatic values can range >50% underpressure to >100% overpressure, mainly in the regions of bending of rheologically strong mantle lithosphere (Burg and Gerya, 2005; Li et al., 2010). In particular, strong undepresures along normal faults forming within outer rise regions of subducting plates can be responsible for downward water suction and deep hydration of oceanic slabs (Faccenda et al., 2009). Weaker HP and UHP rocks of subduction/collision channels are typically subjected to lesser non-lithostatic pressure variations with characteristic magnitudes ranging within 10-20% from the lithostatic values (Burg and Gerya, 2005; Li et al., 2010). The strength of subducted crustal rocks and the degree of

Analysis of fracture patterns and local stress field variations in fractured reservoirs

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Deckert, Hagen; Drews, Michael; Fremgen, Dominik; Wellmann, J. Florian

2010-05-01

A meaningful qualitative evaluation of permeabilities in fractured reservoirs in geothermal or hydrocarbon industry requires the spatial description of the existing discontinuity pattern within the area of interest and an analysis how these fractures might behave under given stress fields. This combined information can then be used for better estimating preferred fluid pathway directions within the reservoir, which is of particular interest for defining potential drilling sites. A description of the spatial fracture pattern mainly includes the orientation of rock discontinuities, spacing relationships between single fractures and their lateral extent. We have examined and quantified fracture patterns in several outcrops of granite at the Costa Brava, Spain, and in the Black Forest, Germany, for describing reservoir characteristics. For our analysis of fracture patterns we have used photogrammetric methods to create high-resolution georeferenced digital 3D images of outcrop walls. The advantage of this approach, compared to conventional methods for fracture analysis, is that it provides a better 3D description of the fracture geometry as the entity of position, extent and orientation of single fractures with respect to their surrounding neighbors is conserved. Hence for instance, the method allows generating fracture density maps, which can be used for a better description of the spatial distribution of discontinuities in a given outcrop. Using photogrammetric techniques also has the advantage to acquire very large data sets providing statistically sound results. To assess whether the recorded discontinuities might act as fluid pathways information on the stress field is needed. A 3D model of the regional tectonic structure was created and the geometry of the faults was put into a mechanical 3D Boundary Element (BE) Model. The model takes into account the elastic material properties of the geological units and the orientation of single fault segments. The

SVAMP: Sequence variation analysis, maps and phylogeny

KAUST Repository

Naeem, Raeece

2014-04-03

Summary: SVAMP is a stand-alone desktop application to visualize genomic variants (in variant call format) in the context of geographical metadata. Users of SVAMP are able to generate phylogenetic trees and perform principal coordinate analysis in real time from variant call format (VCF) and associated metadata files. Allele frequency map, geographical map of isolates, Tajima\\'s D metric, single nucleotide polymorphism density, GC and variation density are also available for visualization in real time. We demonstrate the utility of SVAMP in tracking a methicillin-resistant Staphylococcus aureus outbreak from published next-generation sequencing data across 15 countries. We also demonstrate the scalability and accuracy of our software on 245 Plasmodium falciparum malaria isolates from three continents. Availability and implementation: The Qt/C++ software code, binaries, user manual and example datasets are available at http://cbrc.kaust.edu.sa/svamp. © The Author 2014.

A novel quantitative approach for eliminating sample-to-sample variation using a hue saturation value analysis program.

Science.gov (United States)

Yabusaki, Katsumi; Faits, Tyler; McMullen, Eri; Figueiredo, Jose Luiz; Aikawa, Masanori; Aikawa, Elena

2014-01-01

As computing technology and image analysis techniques have advanced, the practice of histology has grown from a purely qualitative method to one that is highly quantified. Current image analysis software is imprecise and prone to wide variation due to common artifacts and histological limitations. In order to minimize the impact of these artifacts, a more robust method for quantitative image analysis is required. Here we present a novel image analysis software, based on the hue saturation value color space, to be applied to a wide variety of histological stains and tissue types. By using hue, saturation, and value variables instead of the more common red, green, and blue variables, our software offers some distinct advantages over other commercially available programs. We tested the program by analyzing several common histological stains, performed on tissue sections that ranged from 4 µm to 10 µm in thickness, using both a red green blue color space and a hue saturation value color space. We demonstrated that our new software is a simple method for quantitative analysis of histological sections, which is highly robust to variations in section thickness, sectioning artifacts, and stain quality, eliminating sample-to-sample variation.

Linking dynamic phenotyping with metabolite analysis to study natural variation in drought responses of Brachypodium distachyon

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Lorraine H.C. Fisher

2016-11-01

Full Text Available Drought is an important environmental stress limiting the productivity of major crops worldwide. Understanding drought tolerance and possible mechanisms for improving drought resistance is therefore a prerequisite to develop drought-tolerant crops that produce significant yields with reduced amounts of water. Brachypodium distachyon (Brachypodium is a key model species for cereals, forage grasses and energy grasses. In this study, initial screening of a Brachypodium germplasm collection consisting of 138 different ecotypes exposed to progressive drought, highlighted the natural variation in morphology, biomass accumulation and responses to drought stress. A core set of ten ecotypes, classified as being either tolerant, susceptible or intermediate, in response to drought stress, were exposed to mild or severe (respectively 15% and 0% soil water content drought stress and phenomic parameters linked to growth and colour changes were assessed. When exposed to severe drought stress, phenotypic data and metabolite profiling combined with multivariate analysis revealed a remarkable consistency in separating the selected ecotypes into their different pre-defined drought tolerance groups. Increases in several metabolites, including for the phytohormones jasmonic acid and salicylic acid, and TCA-cycle intermediates, were positively correlated with biomass yield and with reduced yellow pixel counts; suggestive of delayed senescence, both key target traits for crop improvement to drought stress. While metabolite analysis also separated ecotypes into the distinct tolerance groupings after exposure to mild drought stress, similar analysis of the phenotypic data failed to do so, confirming the value of metabolomics to investigate early responses to drought stress. The results highlight the potential of combining the analyses of phenotypic and metabolic responses to identify key mechanisms and markers associated with drought tolerance in both the Brachypodium

Stress Analysis of Composites.

Science.gov (United States)

1981-01-01

8217, Finite Elements in Nonlinear Mechanics, 1., 109-130, Tapir Publishers, Norway (1978). 9. A.J. Barnard and P.W. Sharman, ’Elastic-Plastic Analysis Using...Hybrid Stress Finite Elements,’ Finite Elements in Nonlinear Mechanics, 1, 131-148, Tapir Publishers Norway, (1978). ’.........Pian, ’Variational

Some analysis on the diurnal variation of rainfall over the Atlantic Ocean

Science.gov (United States)

Gill, T.; Perng, S.; Hughes, A.

1981-01-01

Data collected from the GARP Atlantic Tropical Experiment (GATE) was examined. The data were collected from 10,000 grid points arranged as a 100 x 100 array; each grid covered a 4 square km area. The amount of rainfall was measured every 15 minutes during the experiment periods using c-band radars. Two types of analyses were performed on the data: analysis of diurnal variation was done on each of grid points based on the rainfall averages at noon and at midnight, and time series analysis on selected grid points based on the hourly averages of rainfall. Since there are no known distribution model which best describes the rainfall amount, nonparametric methods were used to examine the diurnal variation. Kolmogorov-Smirnov test was used to test if the rainfalls at noon and at midnight have the same statistical distribution. Wilcoxon signed-rank test was used to test if the noon rainfall is heavier than, equal to, or lighter than the midnight rainfall. These tests were done on each of the 10,000 grid points at which the data are available.

The Ecology of Exercise: Mechanisms Underlying Individual Variation in Behavior, Activity, and Performance: An Introduction to Symposium.

Science.gov (United States)

Killen, Shaun S; Calsbeek, Ryan; Williams, Tony D

2017-08-01

Wild animals often engage in intense physical activity while performing tasks vital for their survival and reproduction associated with foraging, avoiding predators, fighting, providing parental care, and migrating. In this theme issue we consider how viewing these tasks as "exercise"-analogous to that performed by human athletes-may help provide insight into the mechanisms underlying individual variation in these types of behaviors and the importance of physical activity in an ecological context. In this article and throughout this issue, we focus on four key questions relevant to the study of behavioral ecology that may be addressed by studying wild animal behavior from the perspective of exercise physiology: (1) How hard do individual animals work in response to ecological (or evolutionary) demands?; (2) Do lab-based studies of activity provide good models for understanding activity in free-living animals and individual variation in traits?; (3) Can animals work too hard during "routine" activities?; and (4) Can paradigms of "exercise" and "training" be applied to free-living animals? Attempts to address these issues are currently being facilitated by rapid technological developments associated with physiological measurements and the remote tracking of wild animals, to provide mechanistic insights into the behavior of free-ranging animals at spatial and temporal scales that were previously impossible. We further suggest that viewing the behaviors of non-human animals in terms of the physical exercise performed will allow us to fully take advantage of these technological advances, draw from knowledge and conceptual frameworks already in use by human exercise physiologists, and identify key traits that constrain performance and generate variation in performance among individuals. It is our hope that, by highlighting mechanisms of behavior and performance, the articles in this issue will spur on further synergies between physiologists and ecologists, to take

Synoptic-scale analysis of mechanisms driving surface chlorophyll dynamics in the North Atlantic

DEFF Research Database (Denmark)

Ferreira, Ana Sofia; Hatun, H.; Counillon, F.

2015-01-01

show that, in terms of bottom-up processes alone, there is a dominant physical mechanism, namely mixed-layer shoaling, that best predicts the interannual variation in the initial increase in surface chlorophyll across large sectors of the North Atlantic. We further show that different regions...

Large variation in the Rubisco kinetics of diatoms reveals diversity among their carbon-concentrating mechanisms

Science.gov (United States)

Young, Jodi N.; Heureux, Ana M.C.; Sharwood, Robert E.; Rickaby, Rosalind E.M.; Morel, François M.M.; Whitney, Spencer M.

2016-01-01

While marine phytoplankton rival plants in their contribution to global primary productivity, our understanding of their photosynthesis remains rudimentary. In particular, the kinetic diversity of the CO2-fixing enzyme, Rubisco, in phytoplankton remains unknown. Here we quantify the maximum rates of carboxylation (k cat c), oxygenation (k cat o), Michaelis constants (K m) for CO2 (K C) and O2 (K O), and specificity for CO2 over O2 (SC/O) for Form I Rubisco from 11 diatom species. Diatom Rubisco shows greater variation in K C (23–68 µM), SC/O (57–116mol mol−1), and K O (413–2032 µM) relative to plant and algal Rubisco. The broad range of K C values mostly exceed those of C4 plant Rubisco, suggesting that the strength of the carbon-concentrating mechanism (CCM) in diatoms is more diverse, and more effective than previously predicted. The measured k cat c for each diatom Rubisco showed less variation (2.1–3.7s−1), thus averting the canonical trade-off typically observed between K C and k cat c for plant Form I Rubisco. Uniquely, a negative relationship between K C and cellular Rubisco content was found, suggesting variation among diatom species in how they allocate their limited cellular resources between Rubisco synthesis and their CCM. The activation status of Rubisco in each diatom was low, indicating a requirement for Rubisco activase. This work highlights the need to better understand the correlative natural diversity between the Rubisco kinetics and CCM of diatoms and the underpinning mechanistic differences in catalytic chemistry among the Form I Rubisco superfamily. PMID:27129950

Interannual Variation in Offshore Advection of Amazon-Orinoco Plume Waters: Observations, Forcing Mechanisms, and Impacts

Science.gov (United States)

Fournier, S.; Vandemark, D. C.; Gaultier, L.; Lee, T.; Jonsson, B. F.; Gierach, M. M.

2017-12-01

Sea surface salinity (SSS) and sea surface temperature (SST) variations in the tropical Atlantic east of the Lesser Antilles, a region impacted by freshwater advection from the Amazon and Orinoco Rivers have potential implications to late-summer tropical cyclones (TCs). This study examines these variations during late summer and their forcing mechanisms using observations. During the period 2010-2014, the largest difference in plume-affected area, defined as the extent covered by SSS lower than 35.5 pss, is found between 2011 and 2014. Plume waters covered 92% (60%) of the study region in 2011 (2014) with the averaged SSS in the study region being 2-pss lower in 2011. Lagrangian particle tracking based on satellite-derived ocean currents is used to diagnose the impacts of the river plumes on SSS and SST during 2010-2014. Northward freshwater flux in the summer of 2014 is significantly weaker than those in 2010-2013. This is not due to interannual discharge variability, but significant changes in eddy-driven transport and cross-shore winds. In particular, the stronger cross-shore wind in May 2014 restricted offshore freshwater flow, leading to a smaller extent of the plume-affected area. Persistent SST gradients are often found near the plume edge, which may have implication to ocean-atmosphere coupling associated with TC-related convection. SST in the study region is 1°C higher in 2010 than in other years, and is related to basin-scale ocean-atmosphere processes. Interannual variation in Amazon advective pathways and the associated SSS changes are also influenced by changes in the ITCZ position between 2011 and 2014.

A structure-activity analysis of the variation in oxime efficacy against nerve agents

International Nuclear Information System (INIS)

Maxwell, Donald M.; Koplovitz, Irwin; Worek, Franz; Sweeney, Richard E.

2008-01-01

A structure-activity analysis was used to evaluate the variation in oxime efficacy of 2-PAM, obidoxime, HI-6 and ICD585 against nerve agents. In vivo oxime protection and in vitro oxime reactivation were used as indicators of oxime efficacy against VX, sarin, VR and cyclosarin. Analysis of in vivo oxime protection was conducted with oxime protective ratios (PR) from guinea pigs receiving oxime and atropine therapy after sc administration of nerve agent. Analysis of in vitro reactivation was conducted with second-order rate contants (k r2 ) for oxime reactivation of agent-inhibited acetylcholinesterase (AChE) from guinea pig erythrocytes. In vivo oxime PR and in vitro k r2 decreased as the volume of the alkylmethylphosphonate moiety of nerve agents increased from VX to cyclosarin. This effect was greater with 2-PAM and obidoxime (> 14-fold decrease in PR) than with HI-6 and ICD585 ( r2 as the volume of the agent moiety conjugated to AChE increased was consistent with a steric hindrance mechanism. Linear regression of log (PR-1) against log (k r2 · [oxime dose]) produced two offset parallel regression lines that delineated a significant difference between the coupling of oxime reactivation and oxime protection for HI-6 and ICD585 compared to 2-PAM and obidoxime. HI-6 and ICD585 appeared to be 6.8-fold more effective than 2-PAM and obidoxime at coupling oxime reactivation to oxime protection, which suggested that the isonicotinamide group that is common to both of these oximes, but absent from 2-PAM and obidoxime, is important for oxime efficacy

Genetic mechanisms and age-related macular degeneration: common variants, rare variants, copy number variations, epigenetics, and mitochondrial genetics

Directory of Open Access Journals (Sweden)

Liu Melissa M

2012-08-01

Full Text Available Abstract Age-related macular degeneration (AMD is a complex and multifaceted disease involving contributions from both genetic and environmental influences. Previous work exploring the genetic contributions of AMD has implicated numerous genomic regions and a variety of candidate genes as modulators of AMD susceptibility. Nevertheless, much of this work has revolved around single-nucleotide polymorphisms (SNPs, and it is apparent that a significant portion of the heritability of AMD cannot be explained through these mechanisms. In this review, we consider the role of common variants, rare variants, copy number variations, epigenetics, microRNAs, and mitochondrial genetics in AMD. Copy number variations in regulators of complement activation genes (CFHR1 and CFHR3 and glutathione S transferase genes (GSTM1 and GSTT1 have been associated with AMD, and several additional loci have been identified as regions of potential interest but require further evaluation. MicroRNA dysregulation has been linked to the retinal pigment epithelium degeneration in geographic atrophy, ocular neovascularization, and oxidative stress, all of which are hallmarks in the pathogenesis of AMD. Certain mitochondrial DNA haplogroups and SNPs in mitochondrially encoded NADH dehydrogenase genes have also been associated with AMD. The role of these additional mechanisms remains only partly understood, but the importance of their further investigation is clear to elucidate more completely the genetic basis of AMD.

Analysis of a Pediatric Home Mechanical Ventilator Population.

Science.gov (United States)

Amirnovin, Rambod; Aghamohammadi, Sara; Riley, Carley; Woo, Marlyn S; Del Castillo, Sylvia

2018-05-01

The population of children requiring home mechanical ventilation has evolved over the years and has grown to include a variety of diagnoses and needs that have led to changes in the care of this unique population. The purpose of this study was to provide a descriptive analysis of pediatric patients requiring home mechanical ventilation after hospitalization and how the evolution of this technology has impacted their care. A retrospective, observational, longitudinal analysis of 164 children enrolled in a university-affiliated home mechanical ventilation program over 26 years was performed. Data included each child's primary diagnosis, date of tracheostomy placement, duration of mechanical ventilation during hospitalization that consisted of home mechanical ventilator initiation, total length of pediatric ICU stay, ventilator settings at time of discharge from pediatric ICU, and disposition (home, facility, or died). Univariate, bivariate, and regression analysis was used as appropriate. The most common diagnosis requiring the use of home mechanical ventilation was neuromuscular disease (53%), followed by chronic pulmonary disease (29%). The median length of stay in the pediatric ICU decreased significantly after the implementation of a ventilator ward (70 d [30-142] vs 36 d [18-67], P = .02). The distribution of subjects upon discharge was home (71%), skilled nursing facility (24%), and died (4%), with an increase in the proportion of subjects discharged on PEEP and those going to nursing facilities over time ( P = 0.02). The evolution of home mechanical ventilation has allowed earlier transition out of the pediatric ICU and with increasing disposition to skilled nursing facilities over time. There has also been a change in ventilator management, including increased use of PEEP upon discharge, possibly driven by changes in ventilators and in-patient practice patterns. Copyright © 2018 by Daedalus Enterprises.

Analysis of seismic noise to check the mechanical isolation of a medical device

Directory of Open Access Journals (Sweden)

Sara Rombetto

2011-07-01

Full Text Available We have investigated the mechanical response of a magnetically shielded room that hosts a magnetoencephalography system that is subject to external vibrations. This is a superconducting quantum interference device, which are the most sensitive sensors for magnetic flux variations. When the magnetoencephalography operates with people inside the room, the spectrum of the flux of the magnetic field shows anomalous peaks at several frequencies between 1 Hz and 20 Hz, independent of the experiment that is being run. As the variations in the flux of the magnetic field through the sensors might not only be related to the electrical currents circulating inside the brain, but also to non-damped mechanical oscillations of the room, we installed seismic instrumentation to measure the effective motion inside the room and to compare it to the external motion. For this analysis, we recorded the ambient seismic noise at two very close stations, one inside the magnetically shielded room, the other one outside in the room in which the magnetically shielded room is itself located. Data were collected over four days, including a week-end, to study the response of the magnetically shielded room subjected to different energy levels of external vibrations. The root mean square, Fourier spectra and power spectral density show significant differences between the signal recorded inside and outside the magnetically shielded room, with several anomalous peaks in the frequency band of 1 Hz to 20 Hz. The normalized spectral quantities (horizontal to vertical spectral ratio, and ratio between the internal and external spectra show large amplification at several frequencies, reaching in some cases one order of magnitude. We concluded that the magnetically shielded room does not dampen the external vibrations, but it instead appears to amplify these across a broad frequency range.

The inverse problem of the calculus of variations for discrete systems

Science.gov (United States)

Barbero-Liñán, María; Farré Puiggalí, Marta; Ferraro, Sebastián; Martín de Diego, David

2018-05-01

We develop a geometric version of the inverse problem of the calculus of variations for discrete mechanics and constrained discrete mechanics. The geometric approach consists of using suitable Lagrangian and isotropic submanifolds. We also provide a transition between the discrete and the continuous problems and propose variationality as an interesting geometric property to take into account in the design and computer simulation of numerical integrators for constrained systems. For instance, nonholonomic mechanics is generally non variational but some special cases admit an alternative variational description. We apply some standard nonholonomic integrators to such an example to study which ones conserve this property.

Meta-Analysis of Mitochondrial DNA Variation in the Iberian Peninsula.

Directory of Open Access Journals (Sweden)

Ruth Barral-Arca

Full Text Available The Iberian Peninsula has been the focus of attention of numerous studies dealing with mitochondrial DNA (mtDNA variation, most of them targeting the control region segment. In the present study we sequenced the control region of 3,024 Spanish individuals from areas where available data were still limited. We also compiled mtDNA haplotypes from the literature involving 4,588 sequences and 28 population groups or small regions. We meta-analyzed all these data in order to shed further light on patterns of geographic variation, taking advantage of the large sample size and geographic coverage, in contrast with the atomized sampling strategy of previous work. The results indicate that the main mtDNA haplogroups show primarily clinal geographic patterns across the Iberian geography, roughly along a North-South axis. Haplogroup HV0 (where haplogroup U is nested is more prevalent in the Franco Cantabrian region, in good agreement with previous findings that identified this area as a climate refuge during the Last Glacial Maximum (LGM, prior to a subsequent demographic re-expansion towards Central Europe and the Mediterranean. Typical sub-Saharan and North African lineages are slightly more prevalent in South Iberia, although at low frequencies; this pattern has been shaped mainly by the transatlantic slave trade and the Arab invasion of the Iberian Peninsula. The results also indicate that summary statistics that aim to measure molecular variation, or AMOVA, have limited sensitivity to detect population substructure, in contrast to patterns revealed by phylogeographic analysis. Overall, the results suggest that mtDNA variation in Iberia is substantially stratified. These patterns might be relevant in biomedical studies given that stratification is a common cause of false positives in case-control mtDNA association studies, and should be also considered when weighting the DNA evidence in forensic casework, which is strongly dependent on haplotype

Meta-Analysis of Mitochondrial DNA Variation in the Iberian Peninsula.

Science.gov (United States)

Barral-Arca, Ruth; Pischedda, Sara; Gómez-Carballa, Alberto; Pastoriza, Ana; Mosquera-Miguel, Ana; López-Soto, Manuel; Martinón-Torres, Federico; Álvarez-Iglesias, Vanesa; Salas, Antonio

2016-01-01

The Iberian Peninsula has been the focus of attention of numerous studies dealing with mitochondrial DNA (mtDNA) variation, most of them targeting the control region segment. In the present study we sequenced the control region of 3,024 Spanish individuals from areas where available data were still limited. We also compiled mtDNA haplotypes from the literature involving 4,588 sequences and 28 population groups or small regions. We meta-analyzed all these data in order to shed further light on patterns of geographic variation, taking advantage of the large sample size and geographic coverage, in contrast with the atomized sampling strategy of previous work. The results indicate that the main mtDNA haplogroups show primarily clinal geographic patterns across the Iberian geography, roughly along a North-South axis. Haplogroup HV0 (where haplogroup U is nested) is more prevalent in the Franco Cantabrian region, in good agreement with previous findings that identified this area as a climate refuge during the Last Glacial Maximum (LGM), prior to a subsequent demographic re-expansion towards Central Europe and the Mediterranean. Typical sub-Saharan and North African lineages are slightly more prevalent in South Iberia, although at low frequencies; this pattern has been shaped mainly by the transatlantic slave trade and the Arab invasion of the Iberian Peninsula. The results also indicate that summary statistics that aim to measure molecular variation, or AMOVA, have limited sensitivity to detect population substructure, in contrast to patterns revealed by phylogeographic analysis. Overall, the results suggest that mtDNA variation in Iberia is substantially stratified. These patterns might be relevant in biomedical studies given that stratification is a common cause of false positives in case-control mtDNA association studies, and should be also considered when weighting the DNA evidence in forensic casework, which is strongly dependent on haplotype frequencies.

Schroedinger's variational method of quantization revisited

International Nuclear Information System (INIS)

Yasue, K.

1980-01-01

Schroedinger's original quantization procedure is revisited in the light of Nelson's stochastic framework of quantum mechanics. It is clarified why Schroedinger's proposal of a variational problem led us to a true description of quantum mechanics. (orig.)

Hospital Variation in Cesarean Delivery: A Multilevel Analysis.

Science.gov (United States)

Vecino-Ortiz, Andres I; Bardey, David; Castano-Yepes, Ramon

2015-12-01

To assess the issue of hospital variations in Colombia and to contribute to the methodology on health care variations by using a model that clusters the variance between hospitals while accounting for individual-level reimbursement rates and objective health-status variables. We used data on all births (N = 11,954) taking place in a contributory-regimen insurer network in Colombia during 2007. A multilevel logistic regression model was used to account for the share of unexplained variance between hospitals. In addition, an alternative variance decomposition specification was further carried out to measure the proportion of such unexplained variance due to the region effect. Hospitals account for 20% of the variation in performing cesarean sections, whereas region explains only one-third of such variance. Variables accounting for preferences on the demand side as well as reimbursement rates are found to predict the probability of performing cesarean sections. Hospital variations explain large variances within a single-payer's network. Because this insurer company is highly regarded in terms of performance and finance, these results might provide a lower bound for the scale of hospital variation in the Colombian health care market. Such lower bound provides guidance on the relevance of this issue for Colombia. Some factors such as demand-side preferences and physician reimbursement rates increase variations in health care even within a single-payer network. This is a source of inefficiencies, threatening the quality of health care and financial sustainability. The proposed methodology should be considered in further research on health care variations. Copyright © 2015 International Society for Pharmacoeconomics and Outcomes Research (ISPOR). Published by Elsevier Inc. All rights reserved.

5th Contact Mechanics International Symposium

CERN Document Server

2013-01-01

Contact mechanics is an active research area with deep theoretical and numerical roots. The links between nonsmooth analysis and optimization with mechanics have been investigated intensively during the last decades, especially in Europe. The study of complementarity problems, variational -, quasivariational- and hemivariational inequalities arising in contact mechanics and beyond is a hot topic for interdisciplinary research and cooperation. The needs of industry for robust solution algorithms suitable for large scale applications and the regular updates of the respective elements in major commercial computational mechanics codes, demonstrate that this interaction is not restricted to the academic environment. The contributions of this book have been selected from the participants of the CMIS 2009 international conference which took place in Crete and continued a successful series of specialized contact mechanics conferences.

Underlying mechanism of precursory activity from analysis of upward earthquake migration

Directory of Open Access Journals (Sweden)

O. A. Molchanov

2011-01-01

Full Text Available In this paper we analyse the upward earthquake hypocentral migration in the ten known subduction zones and discuss a possible mechanism of such migration. The total time of the migration appears to range from 2.5 to 10 years. It leads to the estimation of the average velocity V_z~ 60−300 km yr⁻¹. It probably corresponds to the movement of the forcing agent like stress or deformation wave from depths of the upper mantle (600–700 km to the level of the lithosphere with subsequent initiation of fluid migration inside the crust to trigger shallow earthquakes. Averaged over all zones upward migration travel time is about 5 years (< V_z > ≈120 km yr⁻¹ that coincides approximately with the period of characteristic temperature variation (El Nino and crustal seismic periodicity in the Pacific region. These findings are helpful for the study of the seismic precursors and analysis of earthquake triggering.

Analysis of mechanical behavior and hysteresis heat generating mechanism of PDM motor

Energy Technology Data Exchange (ETDEWEB)

Shi, Changshuai; Zhu, Xiaohua; Tang, Liping [Southwest Petroleum University, Chengdu (China); Deng, Juan [Avic Chengdu Engine (Group) Co.,Ltd, Chengdu (China)

2017-03-15

Positive displacement motor (PDM), which is prone to high temperature fatigue failure, can be weakened in its application in deep and superdeep well. In order to study the forced state, deformation regularity and thermal hysteresis of PDM motor, the paper established the three-dimensional thermal-mechanical coupled Finite element model (FEM). Based on the theoretical research, experimental study and numerical simulation, the study found that the displacement of stator lining shows a sinusoidal variation under internal pressure, when adapting the general form of sine function to fitting inner contour line deformation function. Then the paper analyzed the hysteresis heat generating mechanism of the motor, learning that hysteresis thermogenous of stator lining occurs due to the viscoelastic of rubber material and cyclic loading of stator lining. A heartburn happens gradually in the center of the thickest part of the stator lining as temperature increases, which means work efficiency and service life of PDM will be decreased when used in deep or superdeep well. In this paper, we established a theory equation for the choice of interference fit and motor line type optimization design, showing hysteresis heat generating analyzing model and method are reasonable enough to significantly improve PDM’s structure and help better use PDM in deep and surdeep well.

Analysis of mechanical behavior and hysteresis heat generating mechanism of PDM motor

International Nuclear Information System (INIS)

Shi, Changshuai; Zhu, Xiaohua; Tang, Liping; Deng, Juan

2017-01-01

Positive displacement motor (PDM), which is prone to high temperature fatigue failure, can be weakened in its application in deep and superdeep well. In order to study the forced state, deformation regularity and thermal hysteresis of PDM motor, the paper established the three-dimensional thermal-mechanical coupled Finite element model (FEM). Based on the theoretical research, experimental study and numerical simulation, the study found that the displacement of stator lining shows a sinusoidal variation under internal pressure, when adapting the general form of sine function to fitting inner contour line deformation function. Then the paper analyzed the hysteresis heat generating mechanism of the motor, learning that hysteresis thermogenous of stator lining occurs due to the viscoelastic of rubber material and cyclic loading of stator lining. A heartburn happens gradually in the center of the thickest part of the stator lining as temperature increases, which means work efficiency and service life of PDM will be decreased when used in deep or superdeep well. In this paper, we established a theory equation for the choice of interference fit and motor line type optimization design, showing hysteresis heat generating analyzing model and method are reasonable enough to significantly improve PDM’s structure and help better use PDM in deep and surdeep well

Variation Principles and Applications in the Study of Cell Structure and Aging

Science.gov (United States)

Economos, Angelos C.; Miquel, Jaime; Ballard, Ralph C.; Johnson, John E., Jr.

1981-01-01

In this report we have attempted to show that "some reality lies concealed in biological variation". This "reality" has its principles, laws, mechanisms, and rules, only a few of which we have sketched. A related idea we pursued was that important information may be lost in the process of ignoring frequency distributions of physiological variables (as is customary in experimental physiology and gerontology). We suggested that it may be advantageous to expand one's "statistical field of vision" beyond simple averages +/- standard deviations. Indeed, frequency distribution analysis may make visible some hidden information not evident from a simple qualitative analysis, particularly when the effect of some external factor or condition (e.g., aging, dietary chemicals) is being investigated. This was clearly illustrated by the application of distribution analysis in the study of variation in mouse liver cellular and fine structure, and may be true of fine structural studies in general. In living systems, structure and function interact in a dynamic way; they are "inseparable," unlike in technological systems or machines. Changes in fine structure therefore reflect changes in function. If such changes do not exceed a certain physiologic range, a quantitative analysis of structure will provide valuable information on quantitative changes in function that may not be possible or easy to measure directly. Because there is a large inherent variation in fine structure of cells in a given organ of an individual and among individuals, changes in fine structure can be analyzed only by studying frequency distribution curves of various structural characteristics (dimensions). Simple averages +/- S.D. do not in general reveal all information on the effect of a certain factor, because often this effect is not uniform; on the contrary, this will be apparent from distribution analysis because the form of the curves will be affected. We have also attempted to show in this chapter that

Reactive solid surface morphology variation via ionic diffusion.

Science.gov (United States)

Sun, Zhenchao; Zhou, Qiang; Fan, Liang-Shih

2012-08-14

In gas-solid reactions, one of the most important factors that determine the overall reaction rate is the solid morphology, which can be characterized by a combination of smooth, convex and concave structures. Generally, the solid surface structure varies in the course of reactions, which is classically noted as being attributed to one or more of the following three mechanisms: mechanical interaction, molar volume change, and sintering. Here we show that if a gas-solid reaction involves the outward ionic diffusion of a solid-phase reactant then this outward ionic diffusion could eventually smooth the surface with an initial concave and/or convex structure. Specifically, the concave surface is filled via a larger outward diffusing surface pointing to the concave valley, whereas the height of the convex surface decreases via a lower outward diffusion flux in the vertical direction. A quantitative 2-D continuum diffusion model is established to analyze these two morphological variation processes, which shows consistent results with the experiments. This surface morphology variation by solid-phase ionic diffusion serves to provide a fourth mechanism that supplements the traditionally acknowledged solid morphology variation or, in general, porosity variation mechanisms in gas-solid reactions.

Japanese round robin analysis for probabilistic fracture mechanics

International Nuclear Information System (INIS)

Yagawa, G.; Yoshimura, S.; Handa, N.

1991-01-01

Recently attention is focused on the probabilistic fracture mechanics, a branch of fracture mechanics with probability theory for a rational mean to assess the strength of components and structures. In particular, the probabilistic fracture mechanics is recognized as the powerful means for quantitative investigation of significance of factors and rational evaluation of life on problems involving a number of uncertainties, such as degradation of material strength, accuracy and frequency of inspection. Comparison with reference experiments are generally employed to assure the analytical accuracy. However, accuracy and reliability of analytical methods in the probabilistic fracture mechanics are hardly verified by experiments. Therefore, it is strongly needed to verify the probabilistic fracture mechanics through the round robin analysis. This paper describes results from the round robin analysis of flat plate with semi-elliptic cracks on the surface, conducted by the PFM Working Group of LE Subcommittee of the Japan Welding Society under the contract of the Japan Atomic Energy Research Institute and participated by Tokyo University, Yokohama National University, the Power Reactor and Nuclear Fuel Corporation, Tokyo Electric Power Co. Central Research Institute of Electric Power Industry, Toshiba Corporation, Kawasaki Heavy Industry Co. and Mitsubishi Heavy Industry Co. (author)

Analysis of Mechanical Properties of Fabrics of Different Raw Material

Directory of Open Access Journals (Sweden)

Aušra ADOMAITIENĖ

2011-07-01

Full Text Available The study analyzes dependence of mechanical properties (breaking force, elongation at break, static friction force and static friction coefficient on integrated fabric structure factor j and raw material density r, among the fabrics of different raw material (cotton, wool, polypropylene, polyester and polyacrylnitrile and woven in different conditions. The received results demonstrate that sometimes strong dependences exist (wool, polypropylene and polyacrylnitrile, whereas in some cases (cotton and polyester there is no correlation. It was also discovered that the breaking force and elongation at break in the direction of weft increase, when fabric structure becomes more rigid. In the meantime variations of the curves in the direction of warp are insignificant. Regarding static friction force and static friction coefficient (found in two cases, when fabrics were rubbing against leather and materials, it was discovered that consistency of the curves is irregular, i. e. they either increase or decrease, when integrated fabric structure factor j growth. It was also identified that some dependences are not strong and relationship between explored and analyzed factors does not exist. Variation of all these mechanical properties with respect to material density r enables to conclude that increase of material density r results in poor dependences or they are whatsoever non-existent.http://dx.doi.org/10.5755/j01.ms.17.2.487

Bypass Flow and Hot Spot Analysis for PMR200 Block-Core Design with Core Restraint Mechanism

International Nuclear Information System (INIS)

Lim, Hong Sik; Kim, Min Hwan

2009-01-01

The accurate prediction of local hot spot during normal operation is important to ensure core thermal margin in a very high temperature gas-cooled reactor because of production of its high temperature output. The active cooling of the reactor core determining local hot spot is strongly affected by core bypass flows through the inter-column gaps between graphite blocks and the cross gaps between two stacked fuel blocks. The bypass gap sizes vary during core life cycle by the thermal expansion at the elevated temperature and the shrinkage/swelling by fast neutron irradiation. This study is to investigate the impacts of the variation of bypass gaps during core life cycle as well as core restraint mechanism on the amount of bypass flow and thus maximum fuel temperature. The core thermo fluid analysis is performed using the GAMMA+ code for the PMR200 block-core design. For the analysis not only are some modeling features, developed for solid conduction and bypass flow, are implemented into the GAMMA+ code but also non-uniform bypass gap distribution taken from a tool calculating the thermal expansion and the shrinkage/swell of graphite during core life cycle under the design options with and without core restraint mechanism is used

Multidimensional analysis of Drosophila wing variation in Evolution ...

Indian Academy of Sciences (India)

2008-12-23

Dec 23, 2008 ... the different components of phenotypic variation of a complex trait: the wing. ... of Drosophila wing variation in. Evolution Canyon. J. Genet. 87, 407–419]. Introduction ..... identify the effect of slope on wing shape (figure 2,c). All.

Functional analysis and applied optimization in Banach spaces applications to non-convex variational models

CERN Document Server

Botelho, Fabio

2014-01-01

This book introduces the basic concepts of real and functional analysis. It presents the fundamentals of the calculus of variations, convex analysis, duality, and optimization that are necessary to develop applications to physics and engineering problems. The book includes introductory and advanced concepts in measure and integration, as well as an introduction to Sobolev spaces. The problems presented are nonlinear, with non-convex variational formulation. Notably, the primal global minima may not be attained in some situations, in which cases the solution of the dual problem corresponds to an appropriate weak cluster point of minimizing sequences for the primal one. Indeed, the dual approach more readily facilitates numerical computations for some of the selected models. While intended primarily for applied mathematicians, the text will also be of interest to engineers, physicists, and other researchers in related fields.

About the variation mechanism of the isotopic composition of oxygen and carbon through the geological ages

International Nuclear Information System (INIS)

Torquato, J.R.F.; Frischkorn, H.

1982-01-01

The variations of the Δ 180 ratio found in the carbonates are shown as being of the primary origin. In addition it is shown that these values can be preserved, through the geological ages, even it one considers the carbonates to be worked over again. Are given some subsidies about the study of the paleoenvironments through the analysis of the isotopic composition of the carbon. (A.B.) [pt

Vector optimization set-valued and variational analysis

CERN Document Server

Chen, Guang-ya; Yang, Xiaogi

2005-01-01

This book is devoted to vector or multiple criteria approaches in optimization. Topics covered include: vector optimization, vector variational inequalities, vector variational principles, vector minmax inequalities and vector equilibrium problems. In particular, problems with variable ordering relations and set-valued mappings are treated. The nonlinear scalarization method is extensively used throughout the book to deal with various vector-related problems. The results presented are original and should be interesting to researchers and graduates in applied mathematics and operations research

Mechanical behaviors of the dispersion nuclear fuel plates induced by fuel particle swelling and thermal effect II: Effects of variations of the fuel particle diameters

International Nuclear Information System (INIS)

Ding Shurong; Wang Qiming; Huo Yongzhong

2010-01-01

In order to predict the irradiation mechanical behaviors of plate-type dispersion nuclear fuel elements, the total burnup is divided into two stages: the initial stage and the increasing stage. At the initial stage, the thermal effects induced by the high temperature differences between the operation temperatures and the room temperature are mainly considered; and at the increasing stage, the intense mechanical interactions between the fuel particles and the matrix due to the irradiation swelling of fuel particles are focused on. The large-deformation thermo-elasto-plasticity finite element analysis is performed to evaluate the effects of particle diameters on the in-pile mechanical behaviors of fuel elements. The research results indicate that: (1) the maximum Mises stresses and equivalent plastic strains at the matrix increase with the fuel particle diameters; the effects of particle diameters on the maximum first principal stresses vary with burnup, and the considered case with the largest particle diameter holds the maximum values all along; (2) at the cladding near the interface between the fuel meat and the cladding, the Mises stresses and the first principal stresses undergo major changes with increasing burnup, and different variations exist for different particle diameter cases; (3) the maximum Mises stresses at the fuel particles rise with the particle diameters.

Natural variation in stomatal response to closing stimuli among Arabidopsis thaliana accessions after exposure to lowe VPD as a tool to recognize the mechanism of disturbed stomatal functioning

NARCIS (Netherlands)

Ali Niaei Fard, S.; Meeteren, van U.

2014-01-01

Stomatal responses to closing stimuli are disturbed after long-term exposure of plants to low vapour pressure deficit (VPD). The mechanism behind this disturbance is not fully understood. Genetic variation between naturally occurring ecotypes can be helpful to elucidate the mechanism controlling

Mini-review: Strategies for Variation and Evolution of Bacterial Antigens

Science.gov (United States)

Foley, Janet

2015-01-01

Across the eubacteria, antigenic variation has emerged as a strategy to evade host immunity. However, phenotypic variation in some of these antigens also allows the bacteria to exploit variable host niches as well. The specific mechanisms are not shared-derived characters although there is considerable convergent evolution and numerous commonalities reflecting considerations of natural selection and biochemical restraints. Unlike in viruses, mechanisms of antigenic variation in most bacteria involve larger DNA movement such as gene conversion or DNA rearrangement, although some antigens vary due to point mutations or modified transcriptional regulation. The convergent evolution that promotes antigenic variation integrates various evolutionary forces: these include mutations underlying variant production; drift which could remove alleles especially early in infection or during life history phases in arthropod vectors (when the bacterial population size goes through a bottleneck); selection not only for any particular variant but also for the mechanism for the production of variants (i.e., selection for mutability); and overcoming negative selection against variant production. This review highlights the complexities of drivers of antigenic variation, in particular extending evaluation beyond the commonly cited theory of immune evasion. A deeper understanding of the diversity of purpose and mechanisms of antigenic variation in bacteria will contribute to greater insight into bacterial pathogenesis, ecology and coevolution with hosts. PMID:26288700

Analysis of Mechanical Seals for High-Speed Centrifugal Gas Compressors

OpenAIRE

K.N. Nwaigwe; P.E. Ugwuoke; E.E. Anyanwu; D.P.S. Abam

2012-01-01

A study aimed at seal selection efficiency for centrifugal pumps in the oil and gas industry is presented. A detailed analysis of mechanical seals in use in exploration and production activities of the oil and gas sector was undertaken. The approach of analysis was using seal design equations as mathematical models for simulating the performance of the mechanical seal. The results showed a mechanical seal with balance value of 0.5, an increased surface area between mating surfaces; provided w...

Noninvasive pulse pressure variation and stroke volume variation to predict fluid responsiveness at multiple thresholds : a prospective observational study

NARCIS (Netherlands)

Vos, Jaap Jan; Poterman, Marieke; Papineau Salm, Pieternel; Van Amsterdam, Kai; Struys, Michel M. R. F.; Scheeren, Thomas W. L.; Kalmar, Alain F.

2015-01-01

Pulse pressure variation (PPV) and stroke volume variation (SVV) are dynamic preload variables that can be measured noninvasively to assess fluid responsiveness (FR) in anesthetized patients with mechanical ventilation. Few studies have examined the effectiveness of predicting FR according to the

Water quality, Multivariate statistical techniques, submarine out fall, spatial variation, temporal variation

International Nuclear Information System (INIS)

Garcia, Francisco; Palacio, Carlos; Garcia, Uriel

2012-01-01

Multivariate statistical techniques were used to investigate the temporal and spatial variations of water quality at the Santa Marta coastal area where a submarine out fall that discharges 1 m3/s of domestic wastewater is located. Two-way analysis of variance (ANOVA), cluster and principal component analysis and Krigging interpolation were considered for this report. Temporal variation showed two heterogeneous periods. From December to April, and July, where the concentration of the water quality parameters is higher; the rest of the year (May, June, August-November) were significantly lower. The spatial variation reported two areas where the water quality is different, this difference is related to the proximity to the submarine out fall discharge.

Quantitative and experimental analysis of investment incentive mechanisms in electricity markets: short- and long-term analysis of actors' strategies

International Nuclear Information System (INIS)

Khalfallah, Mohamed Haikel

2009-01-01

In this thesis, we deal with the question of reliability of electricity system and particularly the problem of generation capacity adequacy in electricity markets, characterized by uncertain and volatile demand. This question is currently the object of many politics and economics debates in the European Commission of energy. It occurs within the context of de-regulations and reforms of liberalization operated in western countries. This deregulation was caused many shortages and crisis in many electricity markets in the world. Failures are caused by several factors such as, the presence of uncertainties on future demand and fuel prices, the risk-averse behavior of investors and the market power exercised by existing generators. They had led to high spot market prices and a fundamental imbalance between the steadily growing demand for power and the limited increases, due to the lack of investments, in generation capacities. Many mechanisms, additional to the energy market, that ensure an adequate incentive for investments and a stable and socially acceptable electricity prices have been proposed. In this work, we compare different investment incentive mechanisms, in terms of long-term capacity adequacy in an uncertain environment, cost effectiveness and the ability of reducing market power. In the literature, the problem of long-term system reliability has been largely studied in qualitative terms. A few works attempt to model the quantitative effects of those market designs. The contribution of this work is to propose a quantitative analysis based on dynamics models. Competition is considered by using the principles of game theory. Stochastic dynamic programming is used to deal with the stochastic environment of the market and mixed complementarity problem and variational inequality formulations are employed to find Nash equilibrium. In addition to the analytic analysis, an experimental study is carried out in order to include a larger diversity of strategy. The

Change is good: variations in common biological mechanisms in the epsilonproteobacterial genera Campylobacter and Helicobacter.

Science.gov (United States)

Gilbreath, Jeremy J; Cody, William L; Merrell, D Scott; Hendrixson, David R

2011-03-01

Microbial evolution and subsequent species diversification enable bacterial organisms to perform common biological processes by a variety of means. The epsilonproteobacteria are a diverse class of prokaryotes that thrive in diverse habitats. Many of these environmental niches are labeled as extreme, whereas other niches include various sites within human, animal, and insect hosts. Some epsilonproteobacteria, such as Campylobacter jejuni and Helicobacter pylori, are common pathogens of humans that inhabit specific regions of the gastrointestinal tract. As such, the biological processes of pathogenic Campylobacter and Helicobacter spp. are often modeled after those of common enteric pathogens such as Salmonella spp. and Escherichia coli. While many exquisite biological mechanisms involving biochemical processes, genetic regulatory pathways, and pathogenesis of disease have been elucidated from studies of Salmonella spp. and E. coli, these paradigms often do not apply to the same processes in the epsilonproteobacteria. Instead, these bacteria often display extensive variation in common biological mechanisms relative to those of other prototypical bacteria. In this review, five biological processes of commonly studied model bacterial species are compared to those of the epsilonproteobacteria C. jejuni and H. pylori. Distinct differences in the processes of flagellar biosynthesis, DNA uptake and recombination, iron homeostasis, interaction with epithelial cells, and protein glycosylation are highlighted. Collectively, these studies support a broader view of the vast repertoire of biological mechanisms employed by bacteria and suggest that future studies of the epsilonproteobacteria will continue to provide novel and interesting information regarding prokaryotic cellular biology.

Model-based analysis of the effect of different operating conditions on fouling mechanisms in a membrane bioreactor.

Science.gov (United States)

Sabia, Gianpaolo; Ferraris, Marco; Spagni, Alessandro

2016-01-01

This study proposes a model-based evaluation of the effect of different operating conditions with and without pre-denitrification treatment and applying three different solids retention times on the fouling mechanisms involved in membrane bioreactors (MBRs). A total of 11 fouling models obtained from literature were used to fit the transmembrane pressure variations measured in a pilot-scale MBR treating real wastewater for more than 1 year. The results showed that all the models represent reasonable descriptions of the fouling processes in the MBR tested. The model-based analysis confirmed that membrane fouling started by pore blocking (complete blocking model) and by a reduction of the pore diameter (standard blocking) while cake filtration became the dominant fouling mechanism over long-term operation. However, the different fouling mechanisms occurred almost simultaneously making it rather difficult to identify each one. The membrane "history" (i.e. age, lifespan, etc.) seems the most important factor affecting the fouling mechanism more than the applied operating conditions. Nonlinear regression of the most complex models (combined models) evaluated in this study sometimes demonstrated unreliable parameter estimates suggesting that the four basic fouling models (complete, standard, intermediate blocking and cake filtration) contain enough details to represent a reasonable description of the main fouling processes occurring in MBRs.

Nuclear-Mechanical Coupling: Small Amplitude Mechanical Vibrations and High Amplitude Power Oscillations in Nuclear Reactors

International Nuclear Information System (INIS)

Suarez Antola, R.

2008-11-01

The cores of nuclear reactors, including its structural parts and cooling fluids, are complex mechanical systems able to vibrate in a set of normal modes and frequencies, if suitable perturbed. The cyclic variations in the strain state of the core materials may produce changes in density. Changes in density modify the reactivity. Changes in reactivity modify thermal power. Modifications in thermal power produce variations in temperature fields. Variations in temperature produce variations in strain due to thermal-elastic effects. If the variation of the temperature field is fast enough and if the Doppler Effect and other stabilizing prompt effects in the fuel are weak enough, a fast oscillatory instability could be produced, coupled with mechanical vibrations of small amplitude. A recently constructed, simple mathematical model of nuclear reactor kinetics, that improves the one due to A.S. Thompson, is reviewed. It was constructed in order to study, in a first approximation, the stability of the reactor: a nonlinear nuclear-thermal oscillator (that corresponds to reactor point kinetics with thermal-elastic feedback and with frozen delayed neutron effects) is coupled nonlinearly with a linear mechanical-thermal oscillator (that corresponds to the first normal mode of mechanical vibrations excited by thermo-elastic effects). This mathematical model is studied here from the standpoint of mechanical vibrations. It is shown how, under certain conditions, a suitable mechanical perturbation could elicit fast and growing oscillatory instabilities in the reactor power. Applying the asymptotic method due to Krylov, Bogoliubov and Mitropolsky, analytical formulae that may be used in the calculation of the time varying amplitude and phase of the mechanical oscillations are given, as functions of the mechanical, thermal and nuclear parameters of the reactor. The consequences for the mechanical integrity of the reactor are assessed. Some conditions, mainly, but not exclusively

Applied functional analysis

CERN Document Server

Griffel, DH

2002-01-01

A stimulating introductory text, this volume examines many important applications of functional analysis to mechanics, fluid mechanics, diffusive growth, and approximation. Detailed enough to impart a thorough understanding, the text is also sufficiently straightforward for those unfamiliar with abstract analysis. Its four-part treatment begins with distribution theory and discussions of Green's functions. Essentially independent of the preceding material, the second and third parts deal with Banach spaces, Hilbert space, spectral theory, and variational techniques. The final part outlines the

Variation of microstructures and mechanical properties of hot heading process of super heat resisting alloy Inconel 718

International Nuclear Information System (INIS)

Choi, Hong Seok; Ko, Dae Chul; Kim, Byung Min

2007-01-01

Metal forming is the process changing shapes and mechanical properties of the workpiece without initial material reduction through plastic deformation. Above all, because of hot working carried out above recrystallization temperature can be generated large deformation with one blow, it can produce with forging complicated parts or heat resisting super alloy such as Inconel 718 has the worst forgeability. In this paper, we established optimal variation of hot heading process of the Inconel 718 used in heat resisting component and evaluated mechanical properties hot worked product. Die material is SKD61 and initial temperature is 300 .deg. C. Initial billet temperature and punch velocity changed, relatively. Friction coefficient is 0.3 as lubricated condition of hot working. CAE is carried out using DEFORM software before marking the tryout part, and it is manufactured 150 ton screw press with optimal condition. It is know that forming load was decreased according to decreasing punch velocity

Variational Monte Carlo Technique

Indian Academy of Sciences (India)

Home; Journals; Resonance – Journal of Science Education; Volume 19; Issue 8. Variational Monte Carlo Technique: Ground State Energies of Quantum Mechanical Systems. Sukanta Deb. General Article Volume 19 Issue 8 August 2014 pp 713-739 ...

Prediction of ppm level electrical failure by using physical variation analysis

Science.gov (United States)

Hou, Hsin-Ming; Kung, Ji-Fu; Hsu, Y.-B.; Yamazaki, Y.; Maruyama, Kotaro; Toyoshima, Yuya; Chen, Chu-en

2016-03-01

their spatial correlation distance. For local variations (LV) there is no correlation, whereas for global variations (GV) the correlation distance is very large [7]-[9]. This is the first time to certificate the validation of spatial distribution from the affordable bias contour big data fundamental infrastructures. And then apply statistical techniques to dig out the variation sources. The GV come from systematic issue, which could be compensated by adaptive LT condition or OPC correction. But LV comes from random issue, which being considered as intrinsic problem such as structure, material, tool capability… etc. In this paper studying, we can find out the advanced technology node SRAM contact CD local variation (LV) dominates in total variation, about 70%. It often plays significant in-line real time catching WP-DPMO role of the product yield loss, especially for wafer edge is the worst loss within wafer distribution and causes serious reliability concern. The major root cause of variations comes from the PR material induced burr defect (LV), the second one comes from GV enhanced wafer edge short opportunity, which being attributed to three factors, first one factor is wafer edge CD deliberated enlargement for yield improvement as shown in Fig. 10. Second factor is overlaps/AA shifts due to tool capability dealing with incoming wafer's war page issue and optical periphery layout dependent working pitch issue as shown in Fig. 9 (1)., the last factor comes from wafer edge burr enhanced by wafer edge larger Photo Resistance (PR) spin centrifugal force. After implementing KPIs such as GV related AA/CD indexes as shown in Fig. 9 (1) and 10, respectively, and LV related burr index as shown in Fig. 11., we can construct the parts per million (PPM) level short probability model via multi-variables regression, canonical correlation analysis and logistic transformation. The model provides prediction of PPM level electrical failure by using in-line real time physical

Study of Seasonal Variation in Groundwater Quality of Sagar City (India by Principal Component Analysis

Directory of Open Access Journals (Sweden)

Hemant Pathak

2011-01-01

Full Text Available Groundwater is one of the major resources of the drinking water in Sagar city (India.. In this study 15 sampling station were selected for the investigations on 14 chemical parameters. The work was carried out during different months of the pre-monsoon, monsoon and post-monsoon seasons in June 2009 to June 2010. The multivariate statistics such as principal component and cluster analysis were applied to the datasets to investigate seasonal variations in groundwater quality. Principal axis factoring has been used to observe the mode of association of parameters and their interrelationships, for evaluating water quality. Average value of BOD, COD, ammonia and iron was high during entire study period. Elevated values of BOD and ammonia in monsoon, slightly more value of BOD in post-monsoon, BOD, ammonia and iron in pre-monsoon period reflected contribution on temporal effect on groundwater. Results of principal component analysis evinced that all the parameters equally and significantly contribute to groundwater quality variations. Factor 1 and factor 2 analysis revealed the DO value deteriorate due to organic load (BOD/Ammonia in different seasons. Hierarchical cluster analysis grouped 15 stations into four clusters in monsoon, five clusters in post-monsoon and five clusters in pre-monsoon with similar water quality features. Clustered group at monsoon, post-monsoon and pre-monsoon consisted one station exhibiting significant spatial variation in physicochemical composition. The anthropogenic nitrogenous species, as fallout from modernization activities. The study indicated that the groundwater sufficiently well oxygenated and nutrient-rich in study places.

Fimbrial phase variation

DEFF Research Database (Denmark)

Khandige, Surabhi; Møller-Jensen, Jakob

2016-01-01

Surface fimbriae of pathogenic Escherichia coli facilitate sensing, adhesion and even invasion of host epithelial cells. While it is known that the pathogen has the potential to express a plethora of fimbrial variants susceptible to rapid phase ON/OFF variation, it is an open question if the fimb......Surface fimbriae of pathogenic Escherichia coli facilitate sensing, adhesion and even invasion of host epithelial cells. While it is known that the pathogen has the potential to express a plethora of fimbrial variants susceptible to rapid phase ON/OFF variation, it is an open question...... if the fimbrial diversity seen at the population level is the product of random stochasticity or a concerted effort based on active communication. Here we discuss the possibility of a mechanism alternative to a stochastic fimbrial phase variation model affecting the dynamics of a heterogeneous population....

Describing shell shape variations and sexual dimorphism of Golden Apple Snail, Pomacea caniculata (Lamarck, 1822 using geometric morphometric analysis

Directory of Open Access Journals (Sweden)

C.C. Cabuga

2017-09-01

Full Text Available Pomacea caniculata or Golden Apple Snail (GAS existed to be a rice pest in the Philippines and in Asia. Likewise, geographic location also contributes its increasing populations thus making it invasive among freshwater habitats and rice field areas. This study was conducted in order to describe shell shape variations and sexual dimorphism among the populations of P. caniculata. A total of 180 were randomly collected in the three lakes of Esperanza, Agusan del Sur (Lake Dakong Napo, Lake Oro, and Lake Cebulan, of which each lake comprised of 60 samples (30 males and 30 females. To determine the variations and sexual dimorphism in the shell shape of golden apple snail, coordinates was administered to relative warp analysis and the resulting data were subjected to Multivariate Analysis of Variance (MANOVA, Principal Component Analysis (PCA and Canonical Variate Analysis (CVA. The results show statistically significant (P<0.05 from the appended male and female dorsal and ventral/apertural portion. While male and female spire height, body size, and shell shape opening also shows significant variations. These phenotypic distinctions could be associated with geographic isolation, predation and nutrient component of the gastropods. Thus, the importance of using geometric morphometric advances in describing sexual dimorphism in the shell shape of P. caniculata.

Systematic documentation and analysis of human genetic variation using the microattribution approach

Science.gov (United States)

Giardine, Belinda; Borg, Joseph; Higgs, Douglas R.; Peterson, Kenneth R.; Maglott, Donna; Basak, A. Nazli; Clark, Barnaby; Faustino, Paula; Felice, Alex E.; Francina, Alain; Gallivan, Monica V. E.; Georgitsi, Marianthi; Gibbons, Richard J.; Giordano, Piero C.; Harteveld, Cornelis L.; Joly, Philippe; Kanavakis, Emmanuel; Kollia, Panagoula; Menzel, Stephan; Miller, Webb; Moradkhani, Kamran; Old, John; Papachatzopoulou, Adamantia; Papadakis, Manoussos N.; Papadopoulos, Petros; Pavlovic, Sonja; Philipsen, Sjaak; Radmilovic, Milena; Riemer, Cathy; Schrijver, Iris; Stojiljkovic, Maja; Thein, Swee Lay; Traeger-Synodinos, Jan; Tully, Ray; Wada, Takahito; Waye, John; Wiemann, Claudia; Zukic, Branka; Chui, David H. K.; Wajcman, Henri; Hardison, Ross C.; Patrinos, George P.

2013-01-01

We developed a series of interrelated locus-specific databases to store all published and unpublished genetic variation related to these disorders, and then implemented microattribution to encourage submission of unpublished observations of genetic variation to these public repositories 1. A total of 1,941 unique genetic variants in 37 genes, encoding globins (HBA2, HBA1, HBG2, HBG1, HBD, HBB) and other erythroid proteins (ALOX5AP, AQP9, ARG2, ASS1, ATRX, BCL11A, CNTNAP2, CSNK2A1, EPAS1, ERCC2, FLT1, GATA1, GPM6B, HAO2, HBS1L, KDR, KL, KLF1, MAP2K1, MAP3K5, MAP3K7, MYB, NOS1, NOS2, NOS3, NOX3, NUP133, PDE7B, SMAD3, SMAD6, and TOX) are currently documented in these databases with reciprocal attribution of microcitations to data contributors. Our project provides the first example of implementing microattribution to incentivise submission of all known genetic variation in a defined system. It has demonstrably increased the reporting of human variants and now provides a comprehensive online resource for systematically describing human genetic variation in the globin genes and other genes contributing to hemoglobinopathies and thalassemias. The large repository of previously reported data, together with more recent data, acquired by microattribution, demonstrates how the comprehensive documentation of human variation will provide key insights into normal biological processes and how these are perturbed in human genetic disease. Using the microattribution process set out here, datasets which took decades to accumulate for the globin genes could be assembled rapidly for other genes and disease systems. The principles established here for the globin gene system will serve as a model for other systems and the analysis of other common and/or complex human genetic diseases. PMID:21423179

Explaining mutualism variation: a new evolutionary paradox?

Science.gov (United States)

Heath, Katy D; Stinchcombe, John R

2014-02-01

The paradox of mutualism is typically framed as the persistence of interspecific cooperation, despite the potential advantages of cheating. Thus, mutualism research has tended to focus on stabilizing mechanisms that prevent the invasion of low-quality partners. These mechanisms alone cannot explain the persistence of variation for partner quality observed in nature, leaving a large gap in our understanding of how mutualisms evolve. Studying partner quality variation is necessary for applying genetically explicit models to predict evolution in natural populations, a necessary step for understanding the origins of mutualisms as well as their ongoing dynamics. An evolutionary genetic approach, which is focused on naturally occurring mutualist variation, can potentially synthesize the currently disconnected fields of mutualism evolution and coevolutionary genetics. We outline explanations for the maintenance of genetic variation for mutualism and suggest approaches necessary to address them. © 2013 The Author(s). Evolution © 2013 The Society for the Study of Evolution.

Deep geological disposal system development; mechanical structural stability analysis of spent nuclear fuel disposal canister under the internal/external pressure variation

Energy Technology Data Exchange (ETDEWEB)

Kwen, Y. J.; Kang, S. W.; Ha, Z. Y. [Hongik University, Seoul (Korea)

2001-04-01

This work constitutes a summary of the research and development work made for the design and dimensioning of the canister for nuclear fuel disposal. Since the spent nuclear fuel disposal emits high temperature heats and much radiation, its careful treatment is required. For that, a long term(usually 10,000 years) safe repository for spent fuel disposal should be securred. Usually this repository is expected to locate at a depth of 500m underground. The canister construction type introduced here is a solid structure with a cast iron insert and a corrosion resistant overpack, which is designed for spent nuclear fuel disposal in a deep repository in the crystalline bedrock, which entails an evenly distributed load of hydrostatic pressure from undergroundwater and high pressure from swelling of bentonite buffer. Hence, the canister must be designed to withstand these high pressure loads. Many design variables may affect the structural strength of the canister. In this study, among those variables array type of inner baskets and thicknesses of outer shell and lid and bottom are tried to be determined through the mechanical linear structural analysis, thicknesses of outer shell is determined through the nonlinear structural analysis, and the bentonite buffer analysis for the rock movement is conducted through the of nonlinear structural analysis Also the thermal stress effect is computed for the cast iron insert. The canister types studied here are one for PWR fuel and another for CANDU fuel. 23 refs., 60 figs., 23 tabs. (Author)

Analysis of blended fuel properties and cycle-to-cycle variation in a diesel engine with a diethyl ether additive

International Nuclear Information System (INIS)

Ali, Obed M.; Mamat, Rizalman; Masjuki, H.H.; Abdullah, Abdul Adam

2016-01-01

Highlights: • Viability of diethyl ether additive to improve palm biodiesel–diesel blend. • Numerical analysis of engine cyclic variation at different additive ratios. • Physicochemical properties of the blends improved with diethyl ether additive. • Blended fuel heating value is significantly affected. • Blended fuel with 4% diethyl ether shows comparable engine cyclic variation to diesel. - Abstract: In this study, the effect of adding small portions of a diethyl ether additive to biodiesel–diesel blended fuel (B30) was investigated. This study includes an evaluation of the fuel properties and a combustion analysis, specifically, an analysis of the cyclic variations in diesel engines. The amount of additive used with B30 is 2%, 4%, 6% and 8% (by volume). The experimental engine test was conducted at 2500 rpm which produce maximum torque, and the in-cylinder pressure data were collected over 200 consecutive engine cycles for each test. The indicated mean effective pressure time series is analyzed using the coefficient of variation and the wavelet analysis method. The test results for the properties show a slight improvement in density and acid value with a significant decrease in the viscosity, pour point and cloud point of the blended fuel with an 8% additive ratio by 26.5%, 4 °C and 3 °C, respectively, compared with blended fuel without additive. However, the heating value is reduced by approximately 4% with increasing the additive ratio to 8%. From the wavelet power spectrum, it is observed that the intermediate and long-term periodicities appear in diesel fuel, while the short-period oscillations become intermittently visible in pure blended fuel. The coefficient of variation for B30 was the lowest and increased as the additive ratios increased, which agrees with the wavelet analysis results. Furthermore, the spectral power increased with an increase in the additive ratio, indicating that the additive has a noticeable effect on increasing the

Variational principles in physics

CERN Document Server

Basdevant, Jean-Louis

2007-01-01

Optimization under constraints is an essential part of everyday life. Indeed, we routinely solve problems by striking a balance between contradictory interests, individual desires and material contingencies. This notion of equilibrium was dear to thinkers of the enlightenment, as illustrated by Montesquieu’s famous formulation: "In all magistracies, the greatness of the power must be compensated by the brevity of the duration." Astonishingly, natural laws are guided by a similar principle. Variational principles have proven to be surprisingly fertile. For example, Fermat used variational methods to demonstrate that light follows the fastest route from one point to another, an idea which came to be known as Fermat’s principle, a cornerstone of geometrical optics. Variational Principles in Physics explains variational principles and charts their use throughout modern physics. The heart of the book is devoted to the analytical mechanics of Lagrange and Hamilton, the basic tools of any physicist. Prof. Basdev...

Cultural Variations across Academic Genres: A Generic Analysis of Intertextuality in Master's Theses Introductions

Science.gov (United States)

Ketabi, Saeed; Rahavard, Shaahin

2013-01-01

Genre analysis of texts has always been significant. The current study aimed at investigating intertextuality considering cultural variations and differences in students' discourse communities. Social studies, philosophy, and biology were chosen as the representatives of social sciences, humanities and sciences. Tehran University, one of the most…

Outgas analysis of mechanical cryocoolers for long lifetime

Science.gov (United States)

Sato, Yoichi; Shinozaki, Keisuke; Sawada, Kenichiro; Sugita, Hiroyuki; Mitsuda, Kazuhisa; Yamasaki, Noriko Y.; Nakagawa, Takao; Tsunematsu, Shoji; Otsuka, Kiyomi; Kanao, Kenichi; Yoshida, Seiji; Narasaki, Katsuhiro

2017-12-01

Mechanical cryocoolers for space applications are required to have high reliability to achieve long-term operation in orbit. ASTRO-H (Hitomi), the 6th Japanese X-ray astronomy mission, has a major scientific instrument onboard-the Soft X-ray Spectrometer (SXS) with several 20K-class two-stage Stirling (2ST) coolers and a 4K-class Joule Thomson (JT) cooler, which must operate for 3 years to ensure the lifetime of liquid helium as a cryogen for cooling of its detectors [1,2]. Other astronomical missions such as SPICA [3,4], LiteBIRD [5], and Athena [6] also have top requirements for these mechanical cryocoolers, including a 1K-class JT cooler to be operated for more than 3-5 years with no cryogen system. The reliability and lifetime of mechanical cryocoolers are generally understood to depend on (1) mechanical wear of the piston seal and valve seal, and (2) He working gas contaminated by impurity outgases, mainly H2O and CO2 released from the materials in the components of the cryocoolers. The second factor could be critical relative to causing blockage in the JT heat exchanger plumbing and the JT orifice or resulting in blockage in the Stirling regenerator and thereby degrading its performance. Thus, reducing the potential for outgassing in the cryocooler design and fabrication process, and predicting the total amount of outgases in the cryocooler are very important to ensure cryocooler lifetime and cooling performance in orbit. This paper investigates the outgas analysis of the 2ST and the 1K/4K-JT coolers for achieving a long lifetime. First, gas analysis was conducted for the materials and components of the mechanical cryocoolers, focusing on non-metallic materials as impurity gas sources. Then gas analysis of the mechanical wear effect of the piston seal materials and linear ball bearings was investigated. Finally, outgassing from a fully assembled cryocooler was measured to evaluate whether the outgas reduction process works properly to meet the requirement

Integrating population variation and protein structural analysis to improve clinical interpretation of missense variation: application to the WD40 domain.

Science.gov (United States)

Laskowski, Roman A; Tyagi, Nidhi; Johnson, Diana; Joss, Shelagh; Kinning, Esther; McWilliam, Catherine; Splitt, Miranda; Thornton, Janet M; Firth, Helen V; Wright, Caroline F

2016-03-01

We present a generic, multidisciplinary approach for improving our understanding of novel missense variants in recently discovered disease genes exhibiting genetic heterogeneity, by combining clinical and population genetics with protein structural analysis. Using six new de novo missense diagnoses in TBL1XR1 from the Deciphering Developmental Disorders study, together with population variation data, we show that the β-propeller structure of the ubiquitous WD40 domain provides a convincing way to discriminate between pathogenic and benign variation. Children with likely pathogenic mutations in this gene have severely delayed language development, often accompanied by intellectual disability, autism, dysmorphology and gastrointestinal problems. Amino acids affected by likely pathogenic missense mutations are either crucial for the stability of the fold, forming part of a highly conserved symmetrically repeating hydrogen-bonded tetrad, or located at the top face of the β-propeller, where 'hotspot' residues affect the binding of β-catenin to the TBLR1 protein. In contrast, those altered by population variation are significantly less likely to be spatially clustered towards the top face or to be at buried or highly conserved residues. This result is useful not only for interpreting benign and pathogenic missense variants in this gene, but also in other WD40 domains, many of which are associated with disease. © The Author 2016. Published by Oxford University Press.

Novel variational approach for analysis of photonic crystal slabs

International Nuclear Information System (INIS)

Aram, Mohammad Hasan; Khorasani, Sina

2015-01-01

We propose a new method, based on variational principle, for the analysis of photonic crystal (PC) slabs. Most of the methods used today treat PC slabs as three-dimensional (3D) crystal, and this makes these methods very time and/or memory consuming. In our proposed method, we use the Bloch theorem to expand the field on infinite plane waves, whose amplitudes depend on the component perpendicular to the slab surface. By approximating these amplitudes with appropriate functions, we can find modes of PC slabs almost as fast as we can find modes of two-dimensional crystals. In addition to this advantage, we can also calculate radiation modes with this method, which is not feasible with the 3D plane wave expansion method. (paper)

Seasonal variations of equatorial spread-F

Directory of Open Access Journals (Sweden)

B. V. Krishna Murthy

Full Text Available The occurrence of spread-F at Trivandrum (8.5°N, 77°E, dip 0.5°N has been investigated on a seasonal basis in sunspot maximum and minimum years in terms of the growth rate of irregularities by the generalized collisional Rayleigh-Taylor (GRT instability mechanism which includes the gravitational and cross-field instability terms. The occurrence statistics of spread-F at Trivandrum have been obtained using quarter hourly ionograms. The nocturnal variations of the growth rate of irregularities by the GRT mechanism have been estimated for different seasons in sunspot maximum and minimum years at Trivandrum using h'F values and vertical drift velocities obtained from ionograms. It is found that the seasonal variation of spread-F occurrence at Trivandrum can, in general, be accounted for on the basis of the GRT mechanism.

Seasonal variations of equatorial spread-F

Directory of Open Access Journals (Sweden)

K. S. V. Subbarao

1994-01-01

Full Text Available The occurrence of spread-F at Trivandrum (8.5°N, 77°E, dip 0.5°N has been investigated on a seasonal basis in sunspot maximum and minimum years in terms of the growth rate of irregularities by the generalized collisional Rayleigh-Taylor (GRT instability mechanism which includes the gravitational and cross-field instability terms. The occurrence statistics of spread-F at Trivandrum have been obtained using quarter hourly ionograms. The nocturnal variations of the growth rate of irregularities by the GRT mechanism have been estimated for different seasons in sunspot maximum and minimum years at Trivandrum using h'F values and vertical drift velocities obtained from ionograms. It is found that the seasonal variation of spread-F occurrence at Trivandrum can, in general, be accounted for on the basis of the GRT mechanism.

Endocrine-disrupting Chemicals: Review of Toxicological Mechanisms Using Molecular Pathway Analysis

Science.gov (United States)

Yang, Oneyeol; Kim, Hye Lim; Weon, Jong-Il; Seo, Young Rok

2015-01-01

Endocrine disruptors are known to cause harmful effects to human through various exposure routes. These chemicals mainly appear to interfere with the endocrine or hormone systems. As importantly, numerous studies have demonstrated that the accumulation of endocrine disruptors can induce fatal disorders including obesity and cancer. Using diverse biological tools, the potential molecular mechanisms related with these diseases by exposure of endocrine disruptors. Recently, pathway analysis, a bioinformatics tool, is being widely used to predict the potential mechanism or biological network of certain chemicals. In this review, we initially summarize the major molecular mechanisms involved in the induction of the above mentioned diseases by endocrine disruptors. Additionally, we provide the potential markers and signaling mechanisms discovered via pathway analysis under exposure to representative endocrine disruptors, bisphenol, diethylhexylphthalate, and nonylphenol. The review emphasizes the importance of pathway analysis using bioinformatics to finding the specific mechanisms of toxic chemicals, including endocrine disruptors. PMID:25853100

Energy variational analysis of ions in water and channels: Field theory for primitive models of complex ionic fluids.

Science.gov (United States)

Eisenberg, Bob; Hyon, Yunkyong; Liu, Chun

2010-09-14

Ionic solutions are mixtures of interacting anions and cations. They hardly resemble dilute gases of uncharged noninteracting point particles described in elementary textbooks. Biological and electrochemical solutions have many components that interact strongly as they flow in concentrated environments near electrodes, ion channels, or active sites of enzymes. Interactions in concentrated environments help determine the characteristic properties of electrodes, enzymes, and ion channels. Flows are driven by a combination of electrical and chemical potentials that depend on the charges, concentrations, and sizes of all ions, not just the same type of ion. We use a variational method EnVarA (energy variational analysis) that combines Hamilton's least action and Rayleigh's dissipation principles to create a variational field theory that includes flow, friction, and complex structure with physical boundary conditions. EnVarA optimizes both the action integral functional of classical mechanics and the dissipation functional. These functionals can include entropy and dissipation as well as potential energy. The stationary point of the action is determined with respect to the trajectory of particles. The stationary point of the dissipation is determined with respect to rate functions (such as velocity). Both variations are written in one Eulerian (laboratory) framework. In variational analysis, an "extra layer" of mathematics is used to derive partial differential equations. Energies and dissipations of different components are combined in EnVarA and Euler-Lagrange equations are then derived. These partial differential equations are the unique consequence of the contributions of individual components. The form and parameters of the partial differential equations are determined by algebra without additional physical content or assumptions. The partial differential equations of mixtures automatically combine physical properties of individual (unmixed) components. If a new

Energy variational analysis of ions in water and channels: Field theory for primitive models of complex ionic fluids

Science.gov (United States)

Eisenberg, Bob; Hyon, YunKyong; Liu, Chun

2010-09-01

Ionic solutions are mixtures of interacting anions and cations. They hardly resemble dilute gases of uncharged noninteracting point particles described in elementary textbooks. Biological and electrochemical solutions have many components that interact strongly as they flow in concentrated environments near electrodes, ion channels, or active sites of enzymes. Interactions in concentrated environments help determine the characteristic properties of electrodes, enzymes, and ion channels. Flows are driven by a combination of electrical and chemical potentials that depend on the charges, concentrations, and sizes of all ions, not just the same type of ion. We use a variational method EnVarA (energy variational analysis) that combines Hamilton's least action and Rayleigh's dissipation principles to create a variational field theory that includes flow, friction, and complex structure with physical boundary conditions. EnVarA optimizes both the action integral functional of classical mechanics and the dissipation functional. These functionals can include entropy and dissipation as well as potential energy. The stationary point of the action is determined with respect to the trajectory of particles. The stationary point of the dissipation is determined with respect to rate functions (such as velocity). Both variations are written in one Eulerian (laboratory) framework. In variational analysis, an "extra layer" of mathematics is used to derive partial differential equations. Energies and dissipations of different components are combined in EnVarA and Euler-Lagrange equations are then derived. These partial differential equations are the unique consequence of the contributions of individual components. The form and parameters of the partial differential equations are determined by algebra without additional physical content or assumptions. The partial differential equations of mixtures automatically combine physical properties of individual (unmixed) components. If a new

Analysis of the genetic variation in Mycobacterium tuberculosis strains by multiple genome alignments

Directory of Open Access Journals (Sweden)

Morales Juan

2008-11-01

Full Text Available Abstract Background The recent determination of the complete nucleotide sequence of several Mycobacterium tuberculosis (MTB genomes allows the use of comparative genomics as a tool for dissecting the nature and consequence of genetic variability within this species. The multiple alignment of the genomes of clinical strains (CDC1551, F11, Haarlem and C, along with the genomes of laboratory strains (H37Rv and H37Ra, provides new insights on the mechanisms of adaptation of this bacterium to the human host. Findings The genetic variation found in six M. tuberculosis strains does not involve significant genomic rearrangements. Most of the variation results from deletion and transposition events preferentially associated with insertion sequences and genes of the PE/PPE family but not with genes implicated in virulence. Using a Perl-based software islandsanalyser, which creates a representation of the genetic variation in the genome, we identified differences in the patterns of distribution and frequency of the polymorphisms across the genome. The identification of genes displaying strain-specific polymorphisms and the extrapolation of the number of strain-specific polymorphisms to an unlimited number of genomes indicates that the different strains contain a limited number of unique polymorphisms. Conclusion The comparison of multiple genomes demonstrates that the M. tuberculosis genome is currently undergoing an active process of gene decay, analogous to the adaptation process of obligate bacterial symbionts. This observation opens new perspectives into the evolution and the understanding of the pathogenesis of this bacterium.

Analysis of temporal variation in human masticatory cycles during gum chewing.

Science.gov (United States)

Crane, Elizabeth A; Rothman, Edward D; Childers, David; Gerstner, Geoffrey E

2013-10-01

The study investigated modulation of fast and slow opening (FO, SO) and closing (FC, SC) chewing cycle phases using gum-chewing sequences in humans. Twenty-two healthy adult subjects participated by chewing gum for at least 20s on the right side and at least 20s on the left side while jaw movements were tracked with a 3D motion analysis system. Jaw movement data were digitized, and chewing cycle phases were identified and analysed for all chewing cycles in a complete sequence. All four chewing cycle phase durations were more variant than total cycle durations, a result found in other non-human primates. Significant negative correlations existed between the opening phases, SO and FO, and between the closing phases, SC and FC; however, there was less consistency in terms of which phases were negatively correlated both between subjects, and between chewing sides within subjects, compared with results reported in other species. The coordination of intra-cycle phases appears to be flexible and to follow complex rules during gum-chewing in humans. Alternatively, the observed intra-cycle phase relationships could simply reflect: (1) variation in jaw kinematics due to variation in how gum was handled by the tongue on a chew-by-chew basis in our experimental design or (2) by variation due to data sampling noise and/or how phases were defined and identified. Copyright © 2013 Elsevier Ltd. All rights reserved.

Anatomical variations of hepatic arterial system, coeliac trunk and renal arteries: an analysis with multidetector CT angiography.

Science.gov (United States)

Ugurel, M S; Battal, B; Bozlar, U; Nural, M S; Tasar, M; Ors, F; Saglam, M; Karademir, I

2010-08-01

The purpose of our investigation was to determine the anatomical variations in the coeliac trunk-hepatic arterial system and the renal arteries in patients who underwent multidetector CT (MDCT) angiography of the abdominal aorta for various reasons. A total of 100 patients were analysed retrospectively. The coeliac trunk, hepatic arterial system and renal arteries were analysed individually and anatomical variations were recorded. Statistical analysis of the relationship between hepatocoeliac variations and renal artery variations was performed using a chi(2) test. There was a coeliac trunk trifurcation in 89% and bifurcation in 8% of the cases. Coeliac trunk was absent in 1%, a hepatosplenomesenteric trunk was seen in 1% and a splenomesenteric trunk was present in 1%. Hepatic artery variation was present in 48% of patients. Coeliac trunk and/or hepatic arterial variation was present in 23 (39.7%) of the 58 patients with normal renal arteries, and in 27 (64.3%) of the 42 patients with accessory renal arteries. There was a statistically significant correlation between renal artery variations and coeliac trunk-hepatic arterial system variations (p = 0.015). MDCT angiography permits a correct and detailed evaluation of hepatic and renal vascular anatomy. The prevalence of variations in the coeliac trunk and/or hepatic arteries is increased in people with accessory renal arteries. For that reason, when undertaking angiographic examinations directed towards any single organ, the possibility of variations in the vascular structure of other organs should be kept in mind.

Difference Discrete Variational Principles, Euler-Lagrange Cohomology and Symplectic, Multisymplectic Structures I: Difference Discrete Variational Principle

Institute of Scientific and Technical Information of China (English)

GUO Han-Ying,; LI Yu-Qi; WU Ke1; WANG Shi-Kun

2002-01-01

In this first paper of a series, we study the difference discrete variational principle in the framework of multi-parameter differential approach by regarding the forward difference as an entire geometric object in view of noncommutative differential geometry. Regarding the difference as an entire geometric object, the difference discrete version of Legendre transformation can be introduced. By virtue of this variational principle, we can discretely deal with the variation problems in both the Lagrangian and Hamiltonian formalisms to get difference discrete Euler-Lagrange equations and canonical ones for the difference discrete versions of the classical mechanics and classical field theory.

The nonholonomic variational principle

Energy Technology Data Exchange (ETDEWEB)

Krupkova, Olga [Department of Algebra and Geometry, Faculty of Science, Palacky University, Tomkova 40, 779 00 Olomouc (Czech Republic); Department of Mathematics, La Trobe University, Bundoora, Victoria 3086 (Australia)], E-mail: krupkova@inf.upol.cz

2009-05-08

A variational principle for mechanical systems and fields subject to nonholonomic constraints is found, providing Chetaev-reduced equations as equations for extremals. Investigating nonholonomic variations of the Chetaev type and their properties, we develop foundations of the calculus of variations on constraint manifolds, modelled as fibred submanifolds in jet bundles. This setting is appropriate to study general first-order 'nonlinear nonitegrable constraints' that locally are given by a system of first-order ordinary or partial differential equations. We obtain an invariant constrained first variation formula and constrained Euler-Lagrange equations both in intrinsic and coordinate forms, and show that the equations are the same as Chetaev equations 'without Lagrange multipliers', introduced recently by other methods. We pay attention to two possible settings: first, when the constrained system arises from an unconstrained Lagrangian system defined in a neighbourhood of the constraint, and second, more generally, when an 'internal' constrained system on the constraint manifold is given. In the latter case a corresponding unconstrained system need not be a Lagrangian, nor even exist. We also study in detail an important particular case: nonholonomic constraints that can be alternatively modelled by means of (co)distributions in the total space of the fibred manifold; in nonholonomic mechanics this happens whenever constraints affine in velocities are considered. It becomes clear that (and why) if the distribution is completely integrable (= the constraints are semiholonomic), the principle of virtual displacements holds and can be used to obtain the constrained first variational formula by a more or less standard procedure, traditionally used when unconstrained or holonomic systems are concerned. If, however, the constraint is nonintegrable, no significant simplifications are available. Among others, some properties of nonholonomic

Natural variation in stomatal response to closing stimuli among Arabidopsis thaliana accessions after exposure to low VPD as a tool to recognize the mechanism of disturbed stomatal functioning.

Science.gov (United States)

Aliniaeifard, Sasan; van Meeteren, Uulke

2014-12-01

Stomatal responses to closing stimuli are disturbed after long-term exposure of plants to low vapour pressure deficit (VPD). The mechanism behind this disturbance is not fully understood. Genetic variation between naturally occurring ecotypes can be helpful to elucidate the mechanism controlling stomatal movements in different environments. We characterized the stomatal responses of 41 natural accessions of Arabidopsis thaliana to closing stimuli (ABA and desiccation) after they had been exposed for 4 days to moderate VPD (1.17 kPa) or low VPD (0.23 kPa). A fast screening system was used to test stomatal response to ABA using chlorophyll fluorescence imaging under low O2 concentrations of leaf discs floating on ABA solutions. In all accessions stomatal conductance (gs) was increased after prior exposure to low VPD. After exposure to low VPD, stomata of 39 out of 41 of the accessions showed a diminished ABA closing response; only stomata of low VPD-exposed Map-42 and C24 were as responsive to ABA as moderate VPD-exposed plants. In response to desiccation, most of the accessions showed a normal stomata closing response following low VPD exposure. Only low VPD-exposed Cvi-0 and Rrs-7 showed significantly less stomatal closure compared with moderate VPD-exposed plants. Using principle component analysis (PCA), accessions could be categorized to very sensitive, moderately sensitive, and less sensitive to closing stimuli. In conclusion, we present evidence for different stomatal responses to closing stimuli after long-term exposure to low VPD across Arabidopsis accessions. The variation can be a useful tool for finding the mechanism of stomatal malfunctioning. © The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Identification and Modelling of the In-Plane Reinforcement Orientation Variations in a CFRP Laminate Produced by Manual Lay-Up

Science.gov (United States)

Davila, Yves; Crouzeix, Laurent; Douchin, Bernard; Collombet, Francis; Grunevald, Yves-Henri

2017-08-01

Reinforcement angle orientation has a significant effect on the mechanical properties of composite materials. This work presents a methodology to introduce variable reinforcement angles into finite element (FE) models of composite structures. The study of reinforcement orientation variations uses meta-models to identify and control a continuous variation across the composite ply. First, the reinforcement angle is measured through image analysis techniques of the composite plies during the lay-up phase. Image analysis results show that variations in the mean ply orientations are between -0.5 and 0.5° with standard deviations ranging between 0.34 and 0.41°. An automatic post-treatment of the images determines the global and local angle variations yielding good agreements visually and numerically between the analysed images and the identified parameters. A composite plate analysed at the end of the cooling phase is presented as a case of study. Here, the variation in residual strains induced by the variability in the reinforcement orientation are up to 28% of the strain field of the homogeneous FE model. The proposed methodology has shown its capabilities to introduce material and geometrical variability into FE analysis of layered composite structures.

Identification and Modelling of the In-Plane Reinforcement Orientation Variations in a CFRP Laminate Produced by Manual Lay-Up

Science.gov (United States)

Davila, Yves; Crouzeix, Laurent; Douchin, Bernard; Collombet, Francis; Grunevald, Yves-Henri

2018-06-01

Reinforcement angle orientation has a significant effect on the mechanical properties of composite materials. This work presents a methodology to introduce variable reinforcement angles into finite element (FE) models of composite structures. The study of reinforcement orientation variations uses meta-models to identify and control a continuous variation across the composite ply. First, the reinforcement angle is measured through image analysis techniques of the composite plies during the lay-up phase. Image analysis results show that variations in the mean ply orientations are between -0.5 and 0.5° with standard deviations ranging between 0.34 and 0.41°. An automatic post-treatment of the images determines the global and local angle variations yielding good agreements visually and numerically between the analysed images and the identified parameters. A composite plate analysed at the end of the cooling phase is presented as a case of study. Here, the variation in residual strains induced by the variability in the reinforcement orientation are up to 28% of the strain field of the homogeneous FE model. The proposed methodology has shown its capabilities to introduce material and geometrical variability into FE analysis of layered composite structures.

Electromagnetic field and mechanical stress analysis code

International Nuclear Information System (INIS)

1978-01-01

Analysis TEXMAGST is a two stage linear finite element code for the analysis of static magnetic fields in three dimensional structures and associated mechanical stresses produced by the anti J x anti B forces within these structures. The electromagnetic problem is solved in terms of magnetic vector potential A for a given current density anti J as curl 1/μ curl anti A = anti J considering the magnetic permeability as constant. The Coulombian gauge (div anti A = o) was chosen and was implemented through the use of Lagrange multipliers. The second stage of the problem - the calculation of mechanical stresses in the same three dimensional structure is solved by using the same code with few modifications - through a restart card. Body forces anti J x anti B within each element are calculated from the solution of the first stage run and represent the input to the second stage run which will give the solution for the stress problem

Measurement of isotope abundance variations in nature by gravimetric spiking isotope dilution analysis (GS-IDA).

Science.gov (United States)

Chew, Gina; Walczyk, Thomas

2013-04-02

Subtle variations in the isotopic composition of elements carry unique information about physical and chemical processes in nature and are now exploited widely in diverse areas of research. Reliable measurement of natural isotope abundance variations is among the biggest challenges in inorganic mass spectrometry as they are highly sensitive to methodological bias. For decades, double spiking of the sample with a mix of two stable isotopes has been considered the reference technique for measuring such variations both by multicollector-inductively coupled plasma mass spectrometry (MC-ICPMS) and multicollector-thermal ionization mass spectrometry (MC-TIMS). However, this technique can only be applied to elements having at least four stable isotopes. Here we present a novel approach that requires measurement of three isotope signals only and which is more robust than the conventional double spiking technique. This became possible by gravimetric mixing of the sample with an isotopic spike in different proportions and by applying principles of isotope dilution for data analysis (GS-IDA). The potential and principle use of the technique is demonstrated for Mg in human urine using MC-TIMS for isotopic analysis. Mg is an element inaccessible to double spiking methods as it consists of three stable isotopes only and shows great potential for metabolically induced isotope effects waiting to be explored.

Relationship of biomechanical factors to baseball pitching velocity: within pitcher variation.

Science.gov (United States)

Stodden, David F; Fleisig, Glenn S; McLean, Scott P; Andrews, James R

2005-02-01

To reach the level of elite, most baseball pitchers need to consistently produce high ball velocity but avoid high joint loads at the shoulder and elbow that may lead to injury. This study examined the relationship between fastball velocity and variations in throwing mechanics within 19 baseball pitchers who were analyzed via 3-D high-speed motion analysis. Inclusion in the study required each one to demonstrate a variation in velocity of at least 1.8 m/s (range 1.8-3.5 m/s) during 6 to 10 fastball pitch trials. Three mixed model analyses were performed to assess the independent effects of 7 kinetic, 11 temporal, and 12 kinematic parameters on pitched ball velocity. Results indicated that elbow flexion torque, shoulder proximal force, and elbow proximal force were the only three kinetic parameters significantly associated with increased ball velocity. Two temporal parameters (increased time to max shoulder horizontal adduction and decreased time to max shoulder internal rotation) and three kinematic parameters (decreased shoulder horizontal adduction at foot contact, decreased shoulder abduction during acceleration, and increased trunk tilt forward at release) were significantly related to increased ball velocity. These results point to variations in an individual's throwing mechanics that relate to pitched ball velocity, and also suggest that pitchers should focus on consistent mechanics to produce consistently high fastball velocities. In addition, pitchers should strengthen shoulder and elbow musculature that resist distraction as well as improve trunk strength and flexibility to maximize pitching velocity and help prevent injury.

Analysis of substructural variation in families of enzymatic proteins with applications to protein function prediction

Directory of Open Access Journals (Sweden)

Fofanov Viacheslav Y

2010-05-01

Full Text Available Abstract Background Structural variations caused by a wide range of physico-chemical and biological sources directly influence the function of a protein. For enzymatic proteins, the structure and chemistry of the catalytic binding site residues can be loosely defined as a substructure of the protein. Comparative analysis of drug-receptor substructures across and within species has been used for lead evaluation. Substructure-level similarity between the binding sites of functionally similar proteins has also been used to identify instances of convergent evolution among proteins. In functionally homologous protein families, shared chemistry and geometry at catalytic sites provide a common, local point of comparison among proteins that may differ significantly at the sequence, fold, or domain topology levels. Results This paper describes two key results that can be used separately or in combination for protein function analysis. The Family-wise Analysis of SubStructural Templates (FASST method uses all-against-all substructure comparison to determine Substructural Clusters (SCs. SCs characterize the binding site substructural variation within a protein family. In this paper we focus on examples of automatically determined SCs that can be linked to phylogenetic distance between family members, segregation by conformation, and organization by homology among convergent protein lineages. The Motif Ensemble Statistical Hypothesis (MESH framework constructs a representative motif for each protein cluster among the SCs determined by FASST to build motif ensembles that are shown through a series of function prediction experiments to improve the function prediction power of existing motifs. Conclusions FASST contributes a critical feedback and assessment step to existing binding site substructure identification methods and can be used for the thorough investigation of structure-function relationships. The application of MESH allows for an automated

Statistical mechanics of learning: A variational approach for real data

International Nuclear Information System (INIS)

Malzahn, Doerthe; Opper, Manfred

2002-01-01

Using a variational technique, we generalize the statistical physics approach of learning from random examples to make it applicable to real data. We demonstrate the validity and relevance of our method by computing approximate estimators for generalization errors that are based on training data alone

RF-Frontend Design for Process-Variation-Tolerant Receivers

CERN Document Server

Sakian, Pooyan; van Roermund, Arthur

2012-01-01

This book discusses a number of challenges faced by designers of wireless receivers, given complications caused by the shrinking of electronic and mobile devices circuitry into ever-smaller sizes and the resulting complications on the manufacturability, production yield, and the end price of the products.  The authors describe the impact of process technology on the performance of the end product and equip RF designers with countermeasures to cope with such problems.  The mechanisms by which these problems arise are analyzed in detail and novel solutions are provided, including design guidelines for receivers with robustness to process variations and details of circuit blocks that obtain the required performance level. Describes RF receiver frontends and their building blocks from a system- and circuit-level perspective; Provides system-level analysis of a generic RF receiver frontend with robustness to process variations; Includes details of CMOS circuit design at 60GHz and reconfigurable circuits at 60GHz...

Genome Variation Map: a data repository of genome variations in BIG Data Center.

Science.gov (United States)

Song, Shuhui; Tian, Dongmei; Li, Cuiping; Tang, Bixia; Dong, Lili; Xiao, Jingfa; Bao, Yiming; Zhao, Wenming; He, Hang; Zhang, Zhang

2018-01-04

The Genome Variation Map (GVM; http://bigd.big.ac.cn/gvm/) is a public data repository of genome variations. As a core resource in the BIG Data Center, Beijing Institute of Genomics, Chinese Academy of Sciences, GVM dedicates to collect, integrate and visualize genome variations for a wide range of species, accepts submissions of different types of genome variations from all over the world and provides free open access to all publicly available data in support of worldwide research activities. Unlike existing related databases, GVM features integration of a large number of genome variations for a broad diversity of species including human, cultivated plants and domesticated animals. Specifically, the current implementation of GVM not only houses a total of ∼4.9 billion variants for 19 species including chicken, dog, goat, human, poplar, rice and tomato, but also incorporates 8669 individual genotypes and 13 262 manually curated high-quality genotype-to-phenotype associations for non-human species. In addition, GVM provides friendly intuitive web interfaces for data submission, browse, search and visualization. Collectively, GVM serves as an important resource for archiving genomic variation data, helpful for better understanding population genetic diversity and deciphering complex mechanisms associated with different phenotypes. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

Genome Variation Map: a data repository of genome variations in BIG Data Center

Science.gov (United States)

Tian, Dongmei; Li, Cuiping; Tang, Bixia; Dong, Lili; Xiao, Jingfa; Bao, Yiming; Zhao, Wenming; He, Hang

2018-01-01

Abstract The Genome Variation Map (GVM; http://bigd.big.ac.cn/gvm/) is a public data repository of genome variations. As a core resource in the BIG Data Center, Beijing Institute of Genomics, Chinese Academy of Sciences, GVM dedicates to collect, integrate and visualize genome variations for a wide range of species, accepts submissions of different types of genome variations from all over the world and provides free open access to all publicly available data in support of worldwide research activities. Unlike existing related databases, GVM features integration of a large number of genome variations for a broad diversity of species including human, cultivated plants and domesticated animals. Specifically, the current implementation of GVM not only houses a total of ∼4.9 billion variants for 19 species including chicken, dog, goat, human, poplar, rice and tomato, but also incorporates 8669 individual genotypes and 13 262 manually curated high-quality genotype-to-phenotype associations for non-human species. In addition, GVM provides friendly intuitive web interfaces for data submission, browse, search and visualization. Collectively, GVM serves as an important resource for archiving genomic variation data, helpful for better understanding population genetic diversity and deciphering complex mechanisms associated with different phenotypes. PMID:29069473

Empirical study of ill-supported activities in variation risk identification and assessment in early stage product development

DEFF Research Database (Denmark)

Bjarklev, Kristian; Mortensen, Niels Henrik; Ebro, Martin

2017-01-01

medical device company by interviewing six key employees that work in the variation risk identification and assessment process. It is found that there are several ill-supported activities, and that the project teams rely heavily on tolerance experts’ assistance and experience in order to identify...... and assess the variation risk. Ill-supported activities are found to be: Balancing hardness of requirements and the screening; communicating mechanism understanding; predicting user input and internal component movement; documenting and communicating tolerance analysis; implementing robustness in the early...

Dynamic response analysis as a tool for investigating transport mechanisms

International Nuclear Information System (INIS)

Dudok de Wit, Th.; Joye, B.; Lister, J.B.; Moret, J.M.

1990-01-01

Dynamic response analysis provides an attractive method for studying transport mechanisms in tokamak plasmas. The analysis of the radial response has already been widely used for heat and particle transport studies. The frequency dependence of the dynamic response, which is often omitted, reveals further properties of the dominant transport mechanisms. Extended measurements of the soft X-ray emission were carried out on the TCA tokamak in order to determine the underlying transport processes. (author) 5 refs., 2 figs

Mechanical properties of brain tissue by indentation : interregional variation

NARCIS (Netherlands)

Dommelen, van J.A.W.; Sande, van der T.P.J.; Hrapko, M.; Peters, G.W.M.

2010-01-01

Although many studies on the mechanical properties of brain tissue exist, some controversy concerning the possible differences in mechanical properties of white and gray matter tissue remains. Indentation experiments are conducted on white and gray matter tissue of various regions of the cerebrum

Natural variation in rosette size under salt stress conditions corresponds to developmental differences between Arabidopsis accessions and allelic variation in the LRR-KISS gene

KAUST Repository

Julkowska, Magdalena; Klei, Karlijn; Fokkens, Like; Haring, Michel A.; Schranz, M. Eric; Testerink, Christa

2016-01-01

Natural variation among Arabidopsis accessions is an important genetic resource to identify mechanisms underlying plant development and stress tolerance. To evaluate the natural variation in salinity stress tolerance, two large-scale experiments

Analysis of interfraction and intrafraction variation during tangential breast irradiation with an electronic portal imaging device

International Nuclear Information System (INIS)

Smith, Ryan P.; Bloch, Peter; Harris, Eleanor E.; McDonough, James; Sarkar, Abhirup; Kassaee, Alireza; Avery, Steven; Solin, Lawrence J.

2005-01-01

Purpose: To evaluate the daily setup variation and the anatomic movement of the heart and lungs during breast irradiation with tangential photon beams, as measured with an electronic portal imaging device. Methods and materials: Analysis of 1,709 portal images determined changes in the radiation field during a treatment course in 8 patients. Values obtained for every image included central lung distance (CLD) and area of lung and heart within the irradiated field. The data from these measurements were used to evaluate variation from setup between treatment days and motion due to respiration and/or patient movement during treatment delivery. Results: The effect of respiratory motion and movement during treatment was minimal: the maximum range in CLD for any patient on any day was 0.25 cm. The variation caused by day-to-day setup variation was greater, with CLD values for patients ranging from 0.59 cm to 2.94 cm. Similar findings were found for heart and lung areas. Conclusions: There is very little change in CLD and corresponding lung and heart area during individual radiation treatment fractions in breast tangential fields, compared with a relatively greater amount of variation that occurs between days

Stiffening mechanisms in amorphous polyamide bio-nanocomposites

Energy Technology Data Exchange (ETDEWEB)

Focke, Walter W. [Institute of Applied Materials, Department of Chemical Engineering, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria (South Africa); Macheca, Afonso D. [Institute of Applied Materials, Department of Chemical Engineering, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria (South Africa); Department of Chemical Engineering, Eduardo Mondlane University, P.O. Box 257, Maputo (Mozambique); Benhamida, Aida; Kaci, Mustapha [Laboratoire des Matériaux Polymères Avancés (LMPA), Université de Bejaia 06000 (Algeria)

2016-05-18

Dimer fatty acid polyamide nanocomposites based on flake- or needle-shaped nanoparticles were prepared via melt compounding. Transmission electron microscopy showed the presence of both individually dispersed particles and particle agglomerates in the polymer matrix. Dynamic mechanical analysis suggests that three stiffening mechanisms were operating. The reinforcing effect of the high stiffness inorganic filler particles is the primary contributor. Together with the chain confinement effect, that expresses itself in an apparent increase in the glass transition temperature, this provided an adequate rationalization of the stiffness variation below Tg. However, an additional stiffening effect is indicated at temperatures above Tg. The mechanism may involve dynamic network formation based on fluctuating hydrogen bonding interactions between the polymer chains and the filler particles.

Comparing variation across European countries

DEFF Research Database (Denmark)

Thygesen, Lau C; Baixauli-Pérez, Cristobal; Librero-López, Julián

2015-01-01

BACKGROUND: In geographical studies, population distribution is a key issue. An unequal distribution across units of analysis might entail extra-variation and produce misleading conclusions on healthcare performance variations. This article aims at assessing the impact of building more homogeneou...

Mechanical stability of a salt cavern submitted to rapid pressure variations: Application to the underground storage of natural gas, compressed air and hydrogen

International Nuclear Information System (INIS)

Djizanne-Djakeun, Hippolyte

2014-01-01

Salt caverns used for the underground storage of large volumes of natural gas are in high demand given the ever-increasing energy needs. The storage of renewable energy is also envisaged in these salt caverns for example, storage of compressed air and hydrogen mass storage. In both cases, salt caverns are more solicited than before because they are subject to rapid injection and withdrawal rates. These new operating modes raise new mechanical problems, illustrated in particular by sloughing, and falling of overhanging blocks at cavern wall. Indeed, to the purely mechanical stress related to changes in gas pressure variations, repeated dozens of degrees Celsius of temperature variation are superimposed; causes in particular during withdrawal, additional tensile stresses whom may lead to fractures at cavern wall; whose evolution could be dangerous. The mechanical behavior of rock salt is known: it is elasto-viscoplastic, nonlinear and highly thermo sensitive. The existing rock salt constitutive laws and failures and damages criteria have been used to analyze the behavior of caverns under the effects of these new loading. The study deals with the thermo mechanics of rocks and helps to analyze the effects of these new operations modes on the structural stability of salt caverns. The approach was to firstly design and validate a thermodynamic model of the behavior of gas in the cavern. This model was used to analyze blowout in gas salt cavern. Then, with the thermo mechanical coupling, to analyze the effects of rapid withdrawal, rapid injection and daily cycles on the structural stability of caverns. At the experimental level, we sought the optimal conditions to the occurrence and the development of cracks on a pastille and a block of rock salt. The creep behavior of rock salt specimens in triaxial extension also was analyzed. (author)

Progress in classical and quantum variational principles

International Nuclear Information System (INIS)

Gray, C G; Karl, G; Novikov, V A

2004-01-01

We review the development and practical uses of a generalized Maupertuis least action principle in classical mechanics in which the action is varied under the constraint of fixed mean energy for the trial trajectory. The original Maupertuis (Euler-Lagrange) principle constrains the energy at every point along the trajectory. The generalized Maupertuis principle is equivalent to Hamilton's principle. Reciprocal principles are also derived for both the generalized Maupertuis and the Hamilton principles. The reciprocal Maupertuis principle is the classical limit of Schroedinger's variational principle of wave mechanics and is also very useful to solve practical problems in both classical and semiclassical mechanics, in complete analogy with the quantum Rayleigh-Ritz method. Classical, semiclassical and quantum variational calculations are carried out for a number of systems, and the results are compared. Pedagogical as well as research problems are used as examples, which include nonconservative as well as relativistic systems. '... the most beautiful and important discovery of Mechanics.' Lagrange to Maupertuis (November 1756)

Variational Bayes and a problem of reliable communication: II. Infinite systems

International Nuclear Information System (INIS)

Newton, Nigel J; Mitter, Sanjoy K

2012-01-01

We consider a family of estimation problems not admitting conventional analysis because of singularity and measurability issues. We define posterior distributions for the family by a variational technique analogous to that used to define Gibbs measures in statistical mechanics. The family of estimation problems, which arise in the asymptotic analysis of error-control codes, is parametrized by a code rate, R∈(0,∞); this is shown to be analogous to the absolute temperature of statistical mechanics. The family undergoes an (Ehrenfest) first-order phase transition at a critical code rate C (the channel capacity), where there is a convex set of posterior distributions. At all other code rates, there is only one posterior distribution; if R C it has infinite support. In a result reflecting the Dobrushin construction, we show that these posterior distributions are asymptotically consistent with those of families of finite-sequence error-control codes. (paper)

Elastoplastic analysis by optimization

International Nuclear Information System (INIS)

Feijoo, R.A.; Zouain, N.

1983-01-01

Three variational formulations for the elastoplastic analysis are presented. One of them is related to the rate of the state of stress tensor field and corresponds to the minimization with linear constraints of a quadratic functional. The second one is related to the velocity field and is expressed as the minimum without constraints of a nondifferentiable functional. These two classical variational formulations are unable to take into account the mechanical constraints that the stress field must be plastically admissible during all the loadoing process. The third variational formulation is expressed in terms of the stresses and mathematically corresponds to an evolutionary variational iniquality. A simple problem is also presented in order to show the algorithm for the approximate solution for the last variational formulation. (Author) [pt

Analytical kinematics analysis and synthesis of planar mechanisms

CERN Document Server

Gans, Deborah

2013-01-01

Using computational techniques and a complex variable formulation, this book teaches the student of kinematics to handle increasingly difficult problems in both the analysis and design of mechanisms all based on the fundamental loop closure equation.

Analysis of the average daily radon variations in the soil air

International Nuclear Information System (INIS)

Holy, K.; Matos, M.; Boehm, R.; Stanys, T.; Polaskova, A.; Hola, O.

1998-01-01

In this contribution the search of the relation between the daily variations of the radon concentration and the regular daily oscillations of the atmospheric pressure are presented. The deviation of the radon activity concentration in the soil air from the average daily value reaches only a few percent. For the dry summer months the average daily course of the radon activity concentration can be described by the obtained equation. The analysis of the average daily courses could give the information concerning the depth of the gas permeable soil layer. The soil parameter is determined by others method with difficulty

Mechanics of composite material subjected to eigenstress

DEFF Research Database (Denmark)

Fuglsang Nielsen, L.

In this SBI Bulletin a theory is presented dealing with the mechanical behavior of composites subjected to hygro-thermal actions such as shrinkage caused by moisture variations and expansion caused by temperature variations of freezing of water in pore systems. Special attention is given to the t......In this SBI Bulletin a theory is presented dealing with the mechanical behavior of composites subjected to hygro-thermal actions such as shrinkage caused by moisture variations and expansion caused by temperature variations of freezing of water in pore systems. Special attention is given...

Variational calculus with constraints on general algebroids

Energy Technology Data Exchange (ETDEWEB)

Grabowska, Katarzyna [Physics Department, Division of Mathematical Methods in Physics, University of Warsaw, Hoza 69, 00-681 Warszawa (Poland); Grabowski, Janusz [Institute of Mathematics, Polish Academy of Sciences, Sniadeckich 8, PO Box 21, 00-956 Warszawa (Poland)], E-mail: konieczn@fuw.edu.pl, E-mail: jagrab@impan.gov.pl

2008-05-02

Variational calculus on a vector bundle E equipped with a structure of a general algebroid is developed, together with the corresponding analogs of Euler-Lagrange equations. Constrained systems are introduced in the variational and geometrical settings. The constrained Euler-Lagrange equations are derived for analogs of holonomic, vakonomic and nonholonomic constraints. This general model covers the majority of first-order Lagrangian systems which are present in the literature and reduces to the standard variational calculus and the Euler-Lagrange equations in classical mechanics for E = TM.

Variational calculus with constraints on general algebroids

International Nuclear Information System (INIS)

Grabowska, Katarzyna; Grabowski, Janusz

2008-01-01

Variational calculus on a vector bundle E equipped with a structure of a general algebroid is developed, together with the corresponding analogs of Euler-Lagrange equations. Constrained systems are introduced in the variational and geometrical settings. The constrained Euler-Lagrange equations are derived for analogs of holonomic, vakonomic and nonholonomic constraints. This general model covers the majority of first-order Lagrangian systems which are present in the literature and reduces to the standard variational calculus and the Euler-Lagrange equations in classical mechanics for E = TM

Response of mechanical properties of glasses to their chemical, thermal and mechanical histories

DEFF Research Database (Denmark)

Yue, Yuanzheng

, surface, thermal history or excess entropy of the final glass state. Here I review recent progresses in understanding of the responses of mechanical properties of oxide glasses to the compositional variation, thermal history and mechanical deformation. The tensile strength, elastic modulus and hardness...... of glass fibers are dependent on the thermal history (measured as fictive temperature), tension, chemical composition and redox state. However, the fictive temperature affects the hardness of bulk glass in a complicated manner, i.e., the effect does not exhibit a clear regularity in the range...... and micro-cracks occurring during indentation of a glass is discussed briefly. Finally I describe the future perspectives and challenges in understanding responses of mechanical properties of oxide glasses to compositional variation, thermal history and mechanical deformation....

Nonlinear analysis of collapse mechanism in superstructure vehicle

Science.gov (United States)

Nor, M. K. Mohd; Ho, C. S.; Ma'at, N.

2017-04-01

The EU directive 2001/85/EC is an official European text which describes the specifications for "single deck class II and III vehicles" required to be approved by the regulation UN/ECE no.66 (R66). To prevent the catastrophic consequences by occupant during an accident, the Malaysian government has reinforced the same regulation upon superstructure construction. This paper discusses collapse mechanism analysis of a superstructure vehicle using a Crash D nonlinear analysis computer program based on this regulation. The analysis starts by hand calculation to define the required energy absorption by the chosen structure. Simple calculations were then performed to define the weakest collapse mechanism after undesirable collapse modes are eliminated. There are few factors highlighted in this work to pass the regulation. Using the selected cross section, Crash D simulation showed a good result. Generally, the deformation is linearly correlates to the energy absorption for the structure with low stiffness. Failure of critical members such as vertical lower side wall must be avoided to sustain safety of the passenger compartment and prevent from severe and fatal injuries to the trapped occupant.

Energy variational analysis of ions in water and channels: Field theory for primitive models of complex ionic fluids

International Nuclear Information System (INIS)

Eisenberg, Bob; Hyon, YunKyong; Liu, Chun

2010-01-01

Ionic solutions are mixtures of interacting anions and cations. They hardly resemble dilute gases of uncharged noninteracting point particles described in elementary textbooks. Biological and electrochemical solutions have many components that interact strongly as they flow in concentrated environments near electrodes, ion channels, or active sites of enzymes. Interactions in concentrated environments help determine the characteristic properties of electrodes, enzymes, and ion channels. Flows are driven by a combination of electrical and chemical potentials that depend on the charges, concentrations, and sizes of all ions, not just the same type of ion. We use a variational method EnVarA (energy variational analysis) that combines Hamilton’s least action and Rayleigh’s dissipation principles to create a variational field theory that includes flow, friction, and complex structure with physical boundary conditions. EnVarA optimizes both the action integral functional of classical mechanics and the dissipation functional. These functionals can include entropy and dissipation as well as potential energy. The stationary point of the action is determined with respect to the trajectory of particles. The stationary point of the dissipation is determined with respect to rate functions (such as velocity). Both variations are written in one Eulerian (laboratory) framework. In variational analysis, an “extra layer” of mathematics is used to derive partial differential equations. Energies and dissipations of different components are combined in EnVarA and Euler–Lagrange equations are then derived. These partial differential equations are the unique consequence of the contributions of individual components. The form and parameters of the partial differential equations are determined by algebra without additional physical content or assumptions. The partial differential equations of mixtures automatically combine physical properties of individual (unmixed) components

Variation in Local-Scale Edge Effects: Mechanisms and landscape Context

Science.gov (United States)

Therese M. Donovan; Peter W. Jones; Elizabeth M. Annand; Frank R. Thompson III

1997-01-01

Ecological processes near habitat edges often differ from processes away from edges. Yet, the generality of "edge effects" has been hotly debated because results vary tremendously. To understand the factors responsible for this variation, we described nest predation and cowbird distribution patterns in forest edge and forest core habitats on 36 randomly...

Construction of A Trial Function In The Variational Procedure of ...

African Journals Online (AJOL)

A form of variational method for calculating the ground state energy of a quantum mechanical system is considered. The method is based on a systematic construction of a trial variational function at each step of the calculation of the ground state energy. The construction involves introducing more variational parameters to ...

Factors Associated with Variations in Population HIV Prevalence across West Africa: Findings from an Ecological Analysis

Science.gov (United States)

Prudden, Holly J.; Beattie, Tara S.; Bobrova, Natalia; Panovska-Griffiths, Jasmina; Mukandavire, Zindoga; Gorgens, Marelize; Wilson, David; Watts, Charlotte H.

2015-01-01

Background Population HIV prevalence across West Africa varies substantially. We assess the national epidemiological and behavioural factors associated with this. Methods National, urban and rural data on HIV prevalence, the percentage of younger (15–24) and older (25–49) women and men reporting multiple (2+) partners in the past year, HIV prevalence among female sex workers (FSWs), men who have bought sex in the past year (clients), and ART coverage, were compiled for 13 countries. An Ecological analysis using linear regression assessed which factors are associated with national variations in population female and male HIV prevalence, and with each other. Findings National population HIV prevalence varies between 0 4–2 9% for men and 0 4–5.6% for women. ART coverage ranges from 6–23%. National variations in HIV prevalence are not shown to be associated with variations in HIV prevalence among FSWs or clients. Instead they are associated with variations in the percentage of younger and older males and females reporting multiple partners. HIV prevalence is weakly negatively associated with ART coverage, implying it is not increased survival that is the cause of variations in HIV prevalence. FSWs and younger female HIV prevalence are associated with client population sizes, especially older men. Younger female HIV prevalence is strongly associated with older male and female HIV prevalence. Interpretation In West Africa, population HIV prevalence is not significantly higher in countries with high FSW HIV prevalence. Our analysis suggests, higher prevalence occurs where more men buy sex, and where a higher percentage of younger women, and older men and women have multiple partnerships. If a sexual network between clients and young females exists, clients may potentially bridge infection to younger females. HIV prevention should focus both on commercial sex and transmission between clients and younger females with multiple partners. PMID:26698854

Factors Associated with Variations in Population HIV Prevalence across West Africa: Findings from an Ecological Analysis.

Directory of Open Access Journals (Sweden)

Holly J Prudden

Full Text Available Population HIV prevalence across West Africa varies substantially. We assess the national epidemiological and behavioural factors associated with this.National, urban and rural data on HIV prevalence, the percentage of younger (15-24 and older (25-49 women and men reporting multiple (2+ partners in the past year, HIV prevalence among female sex workers (FSWs, men who have bought sex in the past year (clients, and ART coverage, were compiled for 13 countries. An Ecological analysis using linear regression assessed which factors are associated with national variations in population female and male HIV prevalence, and with each other.National population HIV prevalence varies between 0 4-2 9% for men and 0 4-5.6% for women. ART coverage ranges from 6-23%. National variations in HIV prevalence are not shown to be associated with variations in HIV prevalence among FSWs or clients. Instead they are associated with variations in the percentage of younger and older males and females reporting multiple partners. HIV prevalence is weakly negatively associated with ART coverage, implying it is not increased survival that is the cause of variations in HIV prevalence. FSWs and younger female HIV prevalence are associated with client population sizes, especially older men. Younger female HIV prevalence is strongly associated with older male and female HIV prevalence.In West Africa, population HIV prevalence is not significantly higher in countries with high FSW HIV prevalence. Our analysis suggests, higher prevalence occurs where more men buy sex, and where a higher percentage of younger women, and older men and women have multiple partnerships. If a sexual network between clients and young females exists, clients may potentially bridge infection to younger females. HIV prevention should focus both on commercial sex and transmission between clients and younger females with multiple partners.

Kinematic Analysis and Performance Evaluation of Novel PRS Parallel Mechanism

Science.gov (United States)

Balaji, K.; Khan, B. Shahul Hamid

2018-02-01

In this paper, a 3 DoF (Degree of Freedom) novel PRS (Prismatic-Revolute- Spherical) type parallel mechanisms has been designed and presented. The combination of striaght and arc type linkages for 3 DOF parallel mechanism is introduced for the first time. The performances of the mechanisms are evaluated based on the indices such as Minimum Singular Value (MSV), Condition Number (CN), Local Conditioning Index (LCI), Kinematic Configuration Index (KCI) and Global Conditioning Index (GCI). The overall reachable workspace of all mechanisms are presented. The kinematic measure, dexterity measure and workspace analysis for all the mechanism have been evaluated and compared.

An analysis of cross-sectional variations in total household energy requirements in India using micro survey data

International Nuclear Information System (INIS)

Pachauri, Shonali

2004-01-01

Using micro level household survey data from India, we analyse the variation in the pattern and quantum of household energy requirements, both direct and indirect, and the factors causing such variation. An econometric analysis using household survey data from India for the year 1993-1994 reveals that household socio-economic, demographic, geographic, family and dwelling attributes influence the total household energy requirements. There are also large variations in the pattern of energy requirements across households belonging to different expenditure classes. Results from the econometric estimation show that total household expenditure or income level is the most important explanatory variable causing variation in energy requirements across households. In addition, the size of the household dwelling and the age of the head of the household are related to higher household energy requirements. In contrast, the number of members in the household and literacy of the head are associated with lower household energy requirements

An analysis of cross-sectional variations in total household energy requirements in India using micro survey data

Energy Technology Data Exchange (ETDEWEB)

Pachauri, Shonali E-mail: shonali.pachauri@cepe.mavt.ethz.ch

2004-10-01

Using micro level household survey data from India, we analyse the variation in the pattern and quantum of household energy requirements, both direct and indirect, and the factors causing such variation. An econometric analysis using household survey data from India for the year 1993-1994 reveals that household socio-economic, demographic, geographic, family and dwelling attributes influence the total household energy requirements. There are also large variations in the pattern of energy requirements across households belonging to different expenditure classes. Results from the econometric estimation show that total household expenditure or income level is the most important explanatory variable causing variation in energy requirements across households. In addition, the size of the household dwelling and the age of the head of the household are related to higher household energy requirements. In contrast, the number of members in the household and literacy of the head are associated with lower household energy requirements.

Thermal stress analysis and thermo-mechanical fatigue for gas turbine blade

International Nuclear Information System (INIS)

Hyun, J. S.; Kim, B. S.; Kang, M. S.; Ha, J. S.; Lee, Y. S.

2002-01-01

The numerical analysis for gas turbine blades were carried out under several conditions by compounding temperature field, velocity field, thermal conduction of blade, and cooling heat transfer. The three types of 1,100 deg. C class 1st-stage gas turbine blades were analyzed. The analysis results are applied to the study on evaluating the remaining life for thermo-mechanical fatigue life. The thermo-mechanical fatigue experiments under out-of-phase and in-phase have been performed. The physical-based life prediction models which considered the contribution of different damage mechanisms have been applied. These models were applied to the temperature and strain rate dependences of isothermal cycling fatigue lives, and the strain-temperature history effect on the thermo-mechanical fatigue lives

Dietary variation and mechanical properties of articular cartilage in the temporomandibular joint: implications for the role of plasticity in mechanobiology and pathobiology.

Science.gov (United States)

Ravosa, Matthew J; Kane, Robert J

2017-10-01

Due to their nature as tissue composites, skeletal joints pose an additional challenge in terms of evaluating the functional significance of morphological variation in their bony and cartilaginous components in response to altered loading conditions. Arguably, this complexity requires more direct means of investigating joint plasticity and performance than typically employed to analyze macro- and micro-anatomical phenomena. To address a significant gap in our understanding of the plasticity of the mammalian temporomandibular joint (TMJ), we investigated the histology and mechanical properties of condylar articular cartilage in rabbits subjected to long-term variation in diet-induced masticatory stresses, specifically cyclical loading. Three cohorts of male weanlings were raised for six months on different diets until adulthood. Following euthanasia, the TMJ condyles on one side were dissected away, fixed, decalcified, dehydrated, embedded and sectioned. Safranin O staining was employed to identify variation in proteoglycan content, which in turn was used to predict patterns of articular cartilage stiffness in contralateral condylar specimens for each treatment group. Hematoxylin and eosin staining was used to quantify diet-induced changes in chondrocyte hypertrophy and cellularity. Mechanical tests document significant decreases in articular cartilage stiffness corresponding to patterns of extracellular matrix relative protein abundance in rabbits subjected to greater cyclical loading. This indicates that TMJs routinely subjected to higher masticatory stresses due to a challenging diet eventually develop postnatal decreases in the ability to counter compressive loads during postcanine biting and chewing. These findings provide novel information regarding TMJ performance, with broader implications about the costs and benefits of phenotypic plasticity as well as implications for how such biological processes affect connective tissue mechanobiology and pathobiology

Amazing variational approach to chemical reactions

OpenAIRE

Fernández, Francisco M.

2009-01-01

In this letter we analyse an amazing variational approach to chemical reactions. Our results clearly show that the variational expressions are unsuitable for the analysis of empirical data obtained from chemical reactions.

Metallurgy and mechanical properties variation with heat input,during dissimilar metal welding between stainless and carbon steel

Science.gov (United States)

Ramdan, RD; Koswara, AL; Surasno; Wirawan, R.; Faturohman, F.; Widyanto, B.; Suratman, R.

2018-02-01

The present research focus on the metallurgy and mechanical aspect of dissimilar metal welding.One of the common parameters that significantly contribute to the metallurgical aspect on the metal during welding is heat input. Regarding this point, in the present research, voltage, current and the welding speed has been varied in order to observe the effect of heat input on the metallurgical and mechanical aspect of both welded metals. Welding was conducted by Gas Metal Arc Welding (GMAW) on stainless and carbon steel with filler metal of ER 309. After welding, hardness test (micro-Vickers), tensile test, macro and micro-structure characterization and Energy Dispersive Spectroscopy (EDS) characterization were performed. It was observed no brittle martensite observed at HAZ of carbon steel, whereas sensitization was observed at the HAZ of stainless steel for all heat input variation at the present research. Generally, both HAZ at carbon steel and stainless steel did not affect tensile test result, however the formation of chromium carbide at the grain boundary of HAZ structure (sensitization) of stainless steel, indicate that better process and control of welding is required for dissimilar metal welding, especially to overcome this issue.

General quantitative analysis of stress partitioning and boundary conditions in undrained biphasic porous media via a purely macroscopic and purely variational approach

Science.gov (United States)

Serpieri, Roberto; Travascio, Francesco

2016-03-01

In poroelasticity, the effective stress law relates the external stress applied to the medium to the macroscopic strain of the solid phase and the interstitial pressure of the fluid saturating the mixture. Such relationship has been formerly introduced by Terzaghi in form of a principle. To date, no poroelastic theory is capable of recovering a stress partitioning law in agreement with Terzaghi's postulated one in the absence of ad hoc constitutive assumptions on the medium. We recently proposed a variational macroscopic continuum description of two-phase poroelasticity to derive a general biphasic formulation at finite deformations, termed variational macroscopic theory of porous media (VMTPM). Such approach proceeds from the inclusion of the intrinsic volumetric strain among the kinematic descriptors aside to macroscopic displacements, and as a variational theory, uses the Hamilton least-action principle as the unique primitive concept of mechanics invoked to derive momentum balance equations. In a previous related work it was shown that, for the subclass of undrained problems, VMTPM predicts that stress is partitioned in the two phases in strict compliance with Terzaghi's law, irrespective of the microstructural and constitutive features of a given medium. In the present contribution, we further develop the linearized framework of VMTPM to arrive at a general operative formula that allows the quantitative determination of stress partitioning in a jacketed test over a generic isotropic biphasic specimen. This formula is quantitative and general, in that it relates the partial phase stresses to the externally applied stress as function of partitioning coefficients that are all derived by strictly following a purely variational and purely macroscopic approach, and in the absence of any specific hypothesis on the microstructural or constitutive features of a given medium. To achieve this result, the stiffness coefficients of the theory are derived by using

Elucidation of self-induced sloshing occurrence mechanism using numerical analysis

International Nuclear Information System (INIS)

Saeki, Soichi; Madarame, Haruki; Okamoto, Koji; Tanaka, Nobukazu.

1995-01-01

In liquid metal-cooled fast breeder reactors, there is free liquid surface in a reactor vessel and others, and by reducing the size of the reactor vessel and others, it is necessary to increase the flow velocity of liquid sodium coolant. In the free liquid surface in which fast circulating flow exists, undesirable phenomena like waving and bubble catching are feared. The self-induced sloshing taken up in this study is one of these phenomena. Since the actual machine has complex three-dimensional structure, in order to forecast the occurrence of sloshing, it is necessary to elucidate the mechanism of vibration occurrence. The mechanism of occurrence of self-induced sloshing due to horizontal and vertical plane jets has been explained a number of times so far. In this study, by applying the model of the occurrence mechanism of Fukaya to horizontal plane jet, the self-induced sloshing due to horizontal plane jet was simulated by numerical analysis. Based on the results, it was attempted to examine the vibration energy supplied to sloshing in a whole flow field and the dependence of sloshing region on water depth and flow velocity. The numerical simulation, the analysis of the occurrence mechanism by using the numerical analysis code and the results are reported. (K.I.)

Statistical analysis of activation and reaction energies with quasi-variational coupled-cluster theory

Science.gov (United States)

Black, Joshua A.; Knowles, Peter J.

2018-06-01

The performance of quasi-variational coupled-cluster (QV) theory applied to the calculation of activation and reaction energies has been investigated. A statistical analysis of results obtained for six different sets of reactions has been carried out, and the results have been compared to those from standard single-reference methods. In general, the QV methods lead to increased activation energies and larger absolute reaction energies compared to those obtained with traditional coupled-cluster theory.

Quasi-static Cycle Performance Analysis of Micro Modular Reactor for Heat Sink Temperature Variation

Energy Technology Data Exchange (ETDEWEB)

Cho, Seong Kuk; Lee, Jekyoung; Ahn, Yoonhan; Lee, Jeong Ik [KAIST, Daejeon (Korea, Republic of); Cha, Jae Eun [KAERI, Daejeon (Korea, Republic of)

2015-10-15

A Supercritical CO{sub 2} (S-CO{sub 2}) cycle has potential for high thermal efficiency in the moderate turbine inlet temperature (450 - 750 .deg. C) and achieving compact system size because of small specific volume and simple cycle layouts. Owing to small specific volume of S-CO{sub 2} and the development of heat exchanger technology, it can accomplish complete modularization of the system. The previous works focused on the cycle performance analysis for the design point only. However, the heat sink temperature can be changed depending on the ambient atmosphere condition, i.e. weather, seasonal change. This can influence the compressor inlet temperature, which alters the cycle operating condition overall. To reflect the heat sink temperature variation, a quasi-static analysis code for a simple recuperated S-CO{sub 2} Brayton cycle has been developed by the KAIST research team. Thus, cycle performance analysis is carried out with a compressor inlet temperature variation in this research. In the case of dry air-cooling system, the ambient temperature of the local surrounding can affect the compressor inlet temperature. As the compressor inlet temperature increases, thermal efficiency and generated electricity decrease. As further works, the experiment of S-CO{sub 2} integral test loop will be performed to validate in-house codes, such as KAIST{sub T}MD and the quasi-static code.

Effects of prolonged compression on the variations of haemoglobin oxygenation-assessment by spectral analysis of reflectance spectrophotometry signals

Energy Technology Data Exchange (ETDEWEB)

Li, Zengyong; Tam, Eric W C; Mak, Arthur F T; Lau, Roy Y C [Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Kowloon, Hong Kong (China)

2006-11-07

The consequences of rhythmical flow motion for nutrition and the oxygen supply to tissue are largely unknown. In this study, the periodic variations of haemoglobin oxygenation in compressed and uncompressed skin were evaluated with a reflection spectrometer using an in vivo Sprague-Dawley rat model. Skin compression was induced over the trochanter area by a locally applied external pressure of 13.3 kPa (100 mmHg) via a specifically designed pneumatic indentor. A total of 19 rats were used in this study. The loading duration is 6 h per day for four consecutive days. Haemoglobin oxygenation variations were quantified using spectral analysis based on wavelets' transformation. The results found that in both compressed and uncompressed skin, periodic variations of the haemoglobin oxygenation were characterized by two frequencies in the range of 0.01-0.05 Hz and 0.15-0.4 Hz. These frequency ranges coincide with those of the frequency range of the endothelial-related metabolic and myogenic activities found in the flow motion respectively. Tissue compression following the above loading schedule induced a significant decrease in the spectral amplitudes of frequency interval 0.01-0.05 Hz during the pre-occlusion period on day 3 and day 4 as compared to that on day 1 (p < 0.05). In contrast, at a frequency range of 0.15-0.4 Hz, prolonged compression caused a significant increase in spectral amplitude during the pre-occlusion period in the compressed tissue on day 3 (p = 0.041) and day 4 (p = 0.024) compared to that in the uncompressed tissue on day 1. These suggested that the variations of the haemoglobin oxygenation were closely related to the endothelial-related metabolic and myogenic activities. Increased amplitude in the frequency interval 0.15-0.4 Hz indicated an increased workload of the vascular smooth muscle and could be attributed to the increase of O{sub 2} consumption rates of arteriolar walls. The modification of vessel wall oxygen consumption might

Effect of pressure variation on structural, elastic, mechanical, optoelectronic and thermodynamic properties of SrNaF3 fluoroperovskite

Science.gov (United States)

Erum, Nazia; Azhar Iqbal, Muhammad

2017-12-01

The effect of pressure variation on structural, electronic, elastic, mechanical, optical and thermodynamic characteristics of cubic SrNaF3 fluoroperovskite have been investigated by employing first-principles method within the framework of gradient approximation (GGA). For the total energy calculations, we have used the full-potential linearized augmented plane wave (FP-LAPW) method. Thermodynamic properties are computed in terms of quasi-harmonic Debye model. The pressure effects are determined in the range of 0-25 GPa, in which mechanical stability of SrNaF3 fluoroperovskite remains valid. A prominent decrease in lattice constant and bonds length is observed with the increase in pressure from 0 to 25 GPa. The effect of increase in pressure on band structure calculations with GGA and GGA plus Tran-Blaha modified Becke-Johnson (TB-mBJ) potential reveals a predominant characteristic associated with widening of bandgap. The influence of pressure on set of isotropic elastic parameters and their related properties are numerically estimated for SrNaF3 polycrystalline aggregate. Apart of linear dependence of elastic coefficients, transition from brittle to ductile behavior is observed as pressure is increased from 0 to 25 GPa. We have successfully obtained variation of lattice constant, volume expansion, bulk modulus, Debye temperature and specific heat capacities with pressure and temperature in the range of 0-25 GPa and 0-600 K. All the calculated optical properties such as the complex dielectric function ɛ(ω), optical conductivity σ(ω), energy loss function L(ω), absorption coefficient α(w), refractive index n(ω), reflectivity R(ω), and effective number of electrons n eff, via sum rules shift towards the higher energies under the application of pressure.

comparison of elastic-plastic FE method and engineering method for RPV fracture mechanics analysis

International Nuclear Information System (INIS)

Sun Yingxue; Zheng Bin; Zhang Fenggang

2009-01-01

This paper described the FE analysis of elastic-plastic fracture mechanics for a crack in RPV belt line using ABAQUS code. It calculated and evaluated the stress intensity factor and J integral of crack under PTS transients. The result is also compared with that by engineering analysis method. It shows that the results using engineering analysis method is a little larger than the results using FE analysis of 3D elastic-plastic fracture mechanics, thus the engineering analysis method is conservative than the elastic-plastic fracture mechanics method. (authors)

Extensive genetic and DNA methylation variation contribute to heterosis in triploid loquat hybrids.

Science.gov (United States)

Liu, Chao; Wang, Mingbo; Wang, Lingli; Guo, Qigao; Liang, Guolu

2018-04-24

We aim to overcome the unclear origin of the loquat and elucidate the heterosis mechanism of the triploid loquat. Here we investigated the genetic and epigenetic variations between the triploid plant and its parental lines using amplified fragment length polymorphism (AFLP) and methylation-sensitive amplified fragment length polymorphism (MSAP) analyses. We show that in addition to genetic variations, extensive DNA methylation variation occurred during the formation process of triploid loquat, with the triploid hybrid having increased DNA methylation compared to the parents. Furthermore, a correlation existed between genetic variation and DNA methylation remodeling, suggesting that genome instability may lead to DNA methylation variation or vice versa. Sequence analysis of the MSAP bands revealed that over 53% of them overlap with protein-coding genes, which may indicate a functional role of the differential DNA methylation in gene regulation and hence heterosis phenotypes. Consistent with this, the genetic and epigenetic alterations were associated closely to the heterosis phenotypes of triploid loquat, and this association varied for different traits. Our results suggested that the formation of triploid is accompanied by extensive genetic and DNA methylation variation, and these changes contribute to the heterosis phenotypes of the triploid loquats from the two cross lines.

Somatic Genetic Variation in Solid Pseudopapillary Tumor of the Pancreas by Whole Exome Sequencing

Directory of Open Access Journals (Sweden)

Meng Guo

2017-01-01

Full Text Available Solid pseudopapillary tumor of the pancreas (SPT is a rare pancreatic disease with a unique clinical manifestation. Although CTNNB1 gene mutations had been universally reported, genetic variation profiles of SPT are largely unidentified. We conducted whole exome sequencing in nine SPT patients to probe the SPT-specific insertions and deletions (indels and single nucleotide polymorphisms (SNPs. In total, 54 SNPs and 41 indels of prominent variations were demonstrated through parallel exome sequencing. We detected that CTNNB1 mutations presented throughout all patients studied (100%, and a higher count of SNPs was particularly detected in patients with older age, larger tumor, and metastatic disease. By aggregating 95 detected variation events and viewing the interconnections among each of the genes with variations, CTNNB1 was identified as the core portion in the network, which might collaborate with other events such as variations of USP9X, EP400, HTT, MED12, and PKD1 to regulate tumorigenesis. Pathway analysis showed that the events involved in other cancers had the potential to influence the progression of the SNPs count. Our study revealed an insight into the variation of the gene encoding region underlying solid-pseudopapillary neoplasm tumorigenesis. The detection of these variations might partly reflect the potential molecular mechanism.

Discipline and gender variation in ESP learners’ use of metacognitive strategies

Directory of Open Access Journals (Sweden)

Zohreh Seifoori

2014-07-01

Full Text Available Metacognition involves conscious thinking about one’s learning and is implemented in language learning when learners set goals and evaluate their performance, plan their studies, use their language knowledge, attend to the input, search speaking and reading opportunities and ways of enhancing their learning outcomes and focus on their errors. This study sought to measure the use of metacognitive strategies by eight groups of Iranian ESP freshmen in four different disciplines and to detect probable discipline and gender variations. Having assessed the initial homogeneity of the groups via Analysis of Variance of the scores obtained from a Key English Test (KET, the researcher administered the Metacognitive section of Oxford’s Strategy Inventory for Language Learning (SILL (1985. The Between-subjects Analysis of Variance (ANOVA of the research data revealed that the participants studying Mechanical Engineering and Computer outperformed those studying Management and Psychology. Gender variation, however, was observed only in the participants’ use of self-evaluation strategy where males reported a more frequent use. The findings revealed the ESP learners’ need for metacognitive training particularly across gender and major.

Experimental analysis of nonlinear problems in solid mechanics

International Nuclear Information System (INIS)

1982-01-01

The booklet presents abstracts of papers from the Euromech Colloqium No. 152 held from Sept. 20th to 24th, 1982 in Wuppertal, Federal Republic of Germany. All the papers are dealing with Experimental Analysis of Nonlinear Problems in Solid Mechanics. (RW)

Analysis of longer period variation of the Kuroshio Current intrusion into the Luzon Strait using rectified wavelet power spectra

Science.gov (United States)

Yuan, Yaochu; Yang, Chenghao; Tseng, Yu-heng; Zhu, Xiao-Hua; Wang, Huiqun; Chen, Hong

2017-08-01

Longer period variation of the Kuroshio into the Luzon Strait (LS) was identified using acoustic Doppler current profiler (ADCP) observations as well as pressure and temperature time series data recorded by two TDs (manufactured by the RBR Ltd.) at mooring station N2 (20°40.441‧N, 120°38.324‧E). The ADCP was deployed at depths of 50-300 m between July 7, 2009 and April 10, 2011, and the TDs at around 340 and 365 m between July 9, 2009 and July 9, 2011. Observations provide strong evidence of longer period variation of the Kuroshio into the LS using the Vector rotary spectra (VRS) and Rectified wavelet power spectra analysis (RWPSA). RWPSA of the observations allowed the identification of two types of dominant periods. The first type, with the strongest power spectral density (PSD), had a dominant period of 112 d and was found throughout the upper 300 m. For example, the maximum PSD for western and northern velocity components time series were 3800 and 3550 at 50 m, respectively. The maximum power spectral density decrease with deeper depths, i.e., the depth dependence of maximum PSD. The 112 d period was also identified in the pressure and temperature time series data, at 340 m and 365 m. Combined RWPSA with VRS and mechanism analysis, it is clear that the occurrence of the most dominant period of 112 d in the upper 300 m is related to the clockwise meandering of the Kuroshio into the LS, which is caused by westward propagating stronger anticyclonic eddies from the interior ocean due to the interaction of Rossby eddies with the Kuroshio. The second type of dominant period, for example a 40 d period, is related to the anticlockwise meandering of the Kuroshio. The final dominant period of 14 d coincides with the fortnightly spring-neap tidal period.

[Analysis of genomic copy number variations in two sisters with primary amenorrhea and hyperandrogenism].

Science.gov (United States)

Zhang, Yanliang; Xu, Qiuyue; Cai, Xuemei; Li, Yixun; Song, Guibo; Wang, Juan; Zhang, Rongchen; Dai, Yong; Duan, Yong

2015-12-01

To analyze genomic copy number variations (CNVs) in two sisters with primary amenorrhea and hyperandrogenism. G-banding was performed for karyotype analysis. The whole genome of the two sisters were scanned and analyzed by array-based comparative genomic hybridization (array-CGH). The results were confirmed with real-time quantitative PCR (RT-qPCR). No abnormality was found by conventional G-banded chromosome analysis. Array-CGH has identified 11 identical CNVs from the sisters which, however, overlapped with CNVs reported by the Database of Genomic Variants (http://projects.tcag.ca/variation/). Therefore, they are likely to be benign. In addition, a -8.44 Mb 9p11.1-p13.1 duplication (38,561,587-47,002,387 bp, hg18) and a -80.9 kb 4q13.2 deletion (70,183,990-70,264,889 bp, hg18) were also detected in the elder and younger sister, respectively. The relationship between such CNVs and primary amenorrhea and hyperandrogenism was however uncertain. RT-qPCR results were in accordance with array-CGH. Two CNVs were detected in two sisters by array-CGH, for which further studies are needed to clarify their correlation with primary amenorrhea and hyperandrogenism.

Sensitivity analysis and parameter estimation for distributed hydrological modeling: potential of variational methods

Directory of Open Access Journals (Sweden)

W. Castaings

2009-04-01

Full Text Available Variational methods are widely used for the analysis and control of computationally intensive spatially distributed systems. In particular, the adjoint state method enables a very efficient calculation of the derivatives of an objective function (response function to be analysed or cost function to be optimised with respect to model inputs.

In this contribution, it is shown that the potential of variational methods for distributed catchment scale hydrology should be considered. A distributed flash flood model, coupling kinematic wave overland flow and Green Ampt infiltration, is applied to a small catchment of the Thoré basin and used as a relatively simple (synthetic observations but didactic application case.

It is shown that forward and adjoint sensitivity analysis provide a local but extensive insight on the relation between the assigned model parameters and the simulated hydrological response. Spatially distributed parameter sensitivities can be obtained for a very modest calculation effort (~6 times the computing time of a single model run and the singular value decomposition (SVD of the Jacobian matrix provides an interesting perspective for the analysis of the rainfall-runoff relation.

For the estimation of model parameters, adjoint-based derivatives were found exceedingly efficient in driving a bound-constrained quasi-Newton algorithm. The reference parameter set is retrieved independently from the optimization initial condition when the very common dimension reduction strategy (i.e. scalar multipliers is adopted.

Furthermore, the sensitivity analysis results suggest that most of the variability in this high-dimensional parameter space can be captured with a few orthogonal directions. A parametrization based on the SVD leading singular vectors was found very promising but should be combined with another regularization strategy in order to prevent overfitting.

Investigation of fatigue and mechanical properties of the pipe grade poly(vinyl chloride using recycled scraps

Directory of Open Access Journals (Sweden)

J-M. Lee

2015-04-01

Full Text Available In this paper, the effect of using pre-consumer PVC scraps on static and long-term mechanical properties is studied. The degradation characteristics of mixing virgin PVC with crushed pre-consumer and PVC pipe scraps are analyzed using various tools including Gel Permeation Chromatography (GPC, Thermogravimetric Analysis (TGA, X-ray fluorescence (XRF and Fourier Transform Infrared (FTIR spectroscopy. The variation of static mechanical properties as a function of adding pre-consumer PVC pipe scraps is investigated using the degradation analyses of recycled PVC scraps. In addition, fatigue tests are executed to evaluate the long-term durability of blending virgin PVC and recycled PVC scraps, and the fracture surface is investigated in detail to reveal the variation of the fracture mechanisms.

Recognition of battery aging variations for LiFePO4 batteries in 2nd use applications combining incremental capacity analysis and statistical approaches

Science.gov (United States)

Jiang, Yan; Jiang, Jiuchun; Zhang, Caiping; Zhang, Weige; Gao, Yang; Guo, Qipei

2017-08-01

To assess the economic benefits of battery reuse, the consistency and aging characteristics of a retired LiFePO4 battery pack are studied in this paper. The consistency of battery modules is analyzed from the perspective of the capacity and the internal resistance. Test results indicate that battery module parameter dispersion increases along with battery aging. However, battery modules with better capacity consistency doesn't ensure better resistance consistency. Then the aging characteristics of the battery pack are analyzed and the main results are as follow: (1) Weibull and normal distribution are feasible to fit the capacity and resistance distribution of battery modules respectively; (2) SOC imbalance is the dominating factor in the capacity fading process of the battery pack; (3) By employing the incremental capacity (IC) and IC peak area analysis, a consistency evaluation method representing the aging mechanism variations of the battery modules is proposed and then an accurate battery screening strategy is put forward. This study not only provides data support for evaluating economic benefits of retired batteries but also presents a method to recognize the battery aging variations, which is helpful for rapid evaluation and screening of retired batteries for 2nd use.

Numerical Simulation of Hydro-mechanical Deep Drawing — A Study on the Effect of Process Parameters on Drawability and Thickness Variation

Science.gov (United States)

Singh, Swadesh Kumar; Kumar, D. Ravi

2005-08-01

Hydro-mechanical deep drawing is a process for producing cup shaped parts with the assistance of a pressurized fluid. In the present work, numerical simulation of the conventional and counter pressure deep drawing processes has been done with the help of a finite element method based software. Simulation results were analyzed to study the improvement in drawability by using hydro-mechanical processes. The thickness variations in the drawn cups were analyzed and also the effect of counter pressure and oil gap on the thickness distribution was studied. Numerical simulations were also used for the die design, which combines both drawing and ironing processes in a single operation. This modification in the die provides high drawability, facilitates smooth material flow, gives more uniform thickness distribution and corrects the shape distortion.

Studies on the Colour Variation in Larvae of Ephestia kuhniella (ZELLER)(Lepidoptera, Phycitidae) : 1. On the Inheritance of colour variation

OpenAIRE

Osamu, IMURA; Entomology Laboratory, National Food Research Institute

1980-01-01

The crossing experiment and the selection experiment were carried out at 25℃ and 67% r.h. to define genetic mechanisms of the colour variation in larvae of Ephestia kuhniella. The populations sampled from the Wild-type stock showed the wide range of continuous colour variation from white to deep pink in the 5th inster lavae. The results of the crossing experiment between white larval strain and red larval strain selected from the Wild-type stock suggested the larval colour variation was a qua...

The Schwinger variational principle in the quantum-mechanical three-body problem

International Nuclear Information System (INIS)

Podkopaev, A.P.; Subarev, A.I.; Wrzecionko, J.

1978-01-01

The Schwinger variational principle (SVP) is applied to problems of atomic (e + H scattering), mesoatomic (p(dμ) scattering) and nuclear (pion-deuteron scattering) physics. The convergence of the Schwinger variational iterative method is investigated. It is shown that in some cases there occurs a pathological convergence. It means that the iterative procedure is convergent, but not to the exact solution. The method of strong coupling of channels is reformulated on the basis of SVP. it permits the summation over all closed channels. The obtained equations are applied to the calculations of the low energy scattering parameters of the following processes: e + H → e + H; πd → πd. The dependence on πN scattering lengths and effective radii is investigated. It is shown that the contribution of closed channels to the π - d scattering length is 30 percent

Immunogenetic mechanisms driving norovirus GII.4 antigenic variation.

Directory of Open Access Journals (Sweden)

Lisa C Lindesmith

Full Text Available Noroviruses are the principal cause of epidemic gastroenteritis worldwide with GII.4 strains accounting for 80% of infections. The major capsid protein of GII.4 strains is evolving rapidly, resulting in new epidemic strains with altered antigenic potentials. To test if antigenic drift may contribute to GII.4 persistence, human memory B cells were immortalized and the resulting human monoclonal antibodies (mAbs characterized for reactivity to a panel of time-ordered GII.4 virus-like particles (VLPs. Reflecting the complex exposure history of the volunteer, human anti-GII.4 mAbs grouped into three VLP reactivity patterns; ancestral (1987-1997, contemporary (2004-2009, and broad (1987-2009. NVB 114 reacted exclusively to the earliest GII.4 VLPs by EIA and blockade. NVB 97 specifically bound and blocked only contemporary GII.4 VLPs, while NBV 111 and 43.9 exclusively reacted with and blocked variants of the GII.4.2006 Minerva strain. Three mAbs had broad GII.4 reactivity. Two, NVB 37.10 and 61.3, also detected other genogroup II VLPs by EIA but did not block any VLP interactions with carbohydrate ligands. NVB 71.4 cross-neutralized the panel of time-ordered GII.4 VLPs, as measured by VLP-carbohydrate blockade assays. Using mutant VLPs designed to alter predicted antigenic epitopes, two evolving, GII.4-specific, blockade epitopes were mapped. Amino acids 294-298 and 368-372 were required for binding NVB 114, 111 and 43.9 mAbs. Amino acids 393-395 were essential for binding NVB 97, supporting earlier correlations between antibody blockade escape and carbohydrate binding variation. These data inform VLP vaccine design, provide a strategy for expanding the cross-blockade potential of chimeric VLP vaccines, and identify an antibody with broadly neutralizing therapeutic potential for the treatment of human disease. Moreover, these data support the hypothesis that GII.4 norovirus evolution is heavily influenced by antigenic variation of neutralizing

Thermal-mechanical analysis for a viscoelastoplastic model by finite element method

International Nuclear Information System (INIS)

Vaz, L.E.; Vaz, R.O.E.

1989-01-01

The aim of this work is to present a formulation and a computer program which permits the study of problems involving the influence of the temperature on the mechanical behavior of a viscoelastoplastic material. The thermo-mechanical analysis is carried out in two steps. The first step performs the transient thermal analysis. The second step uses the time-history of the temperature distribution that results on the first step, for the transient stress analysis. The program treat plane and axi-symmetrical problems. As an application of the formulation the quenching of a cylinder of metal is examined. (author)

Analysis of thermal-hydrologic-mechanical behavior near an emplacement drift at Yucca Mountain

International Nuclear Information System (INIS)

Rutqvist, Jonny; Tsang, Chin-Fu

2002-01-01

A coupled thermal, hydrologic and mechanical (THM) analysis is conducted to evaluate the impact of coupled THM processes on the performance of a potential nuclear waste repository at Yucca Mountain, Nevada. The analysis considers changes in rock mass porosity, permeability, and capillary pressure caused by rock deformations during drift excavation, as well as those caused by thermo-mechanically induced rock deformations after emplacement of the heat-generating waste. The analysis consists of a detailed calibration of coupled hydraulic-mechanical rock mass properties against field experiments, followed by a prediction of the coupled thermal, hydrologic, and mechanical behavior around a potential repository drift. For the particular problem studied and parameters used, the analysis indicates that the stress-induced permeability changes will be within one order of magnitude and that these permeability changes do not significantly impact the overall flow pattern around the repository drift

Sensitivity analysis on mechanical stability of the underground excavations for an high-level radioactive waste repository

International Nuclear Information System (INIS)

Park, Jeong Hwa; Kwon, Sang Ki; Choi, Jong Won; Kang, Chul Hyung

2001-01-01

For the safe design of an underground nuclear waste repository, it is necessary to investigate the influence of the major parameters on the tunnel stability. In this study, sensitivity analysis was carried out to find the major parameters on the mechanical stability point of view. Fourteen parameters consisted of 10 site parameters and 4 design parameters were included in the FLAC3D. From the numerical analyses employing single parameter variation, it was possible to determine important parameters. In order to investigate the interaction between the parameters, fractional factorial design for the parameters, such as in situ stress ratio, depth, tunnel dimensions, joint spacing, joint stiffness, friction angle, and rock strength, was carried out. And in order to investigate the interaction between design parameters, fractional factorial design for parameters, such as in situ stress, depth, tunnel size, tunnel spacing and borehole spacing, was carried out

A new strategy for earthquake focal mechanisms using waveform-correlation-derived relative polarities and cluster analysis: Application to the 2014 Long Valley Caldera earthquake swarm

Science.gov (United States)

Shelly, David R.; Hardebeck, Jeanne L.; Ellsworth, William L.; Hill, David P.

2016-01-01

In microseismicity analyses, reliable focal mechanisms can typically be obtained for only a small subset of located events. We address this limitation here, presenting a framework for determining robust focal mechanisms for entire populations of very small events. To achieve this, we resolve relative P and S wave polarities between pairs of waveforms by using their signed correlation coefficients—a by-product of previously performed precise earthquake relocation. We then use cluster analysis to group events with similar patterns of polarities across the network. Finally, we apply a standard mechanism inversion to the grouped data, using either catalog or correlation-derived P wave polarity data sets. This approach has great potential for enhancing analyses of spatially concentrated microseismicity such as earthquake swarms, mainshock-aftershock sequences, and industrial reservoir stimulation or injection-induced seismic sequences. To demonstrate its utility, we apply this technique to the 2014 Long Valley Caldera earthquake swarm. In our analysis, 85% of the events (7212 out of 8494 located by Shelly et al. [2016]) fall within five well-constrained mechanism clusters, more than 12 times the number with network-determined mechanisms. Of the earthquakes we characterize, 3023 (42%) have magnitudes smaller than 0.0. We find that mechanism variations are strongly associated with corresponding hypocentral structure, yet mechanism heterogeneity also occurs where it cannot be resolved by hypocentral patterns, often confined to small-magnitude events. Small (5–20°) rotations between mechanism orientations and earthquake location trends persist when we apply 3-D velocity models and might reflect a geometry of en echelon, interlinked shear, and dilational faulting.

Dopamine transporters govern diurnal variation in extracellular dopamine tone

OpenAIRE

Ferris, Mark J.; España, Rodrigo A.; Locke, Jason L.; Konstantopoulos, Joanne K.; Rose, Jamie H.; Chen, Rong; Jones, Sara R.

2014-01-01

The mechanism for diurnal (i.e., light/dark) oscillations in extracellular dopamine tone in mesolimbic and nigrostriatal systems is unknown. This is because, unlike other neurotransmitter systems, variation in dopamine tone does not correlate with variation in dopamine cell firing. The current research pinpoints the dopamine transporter as a critical governor of diurnal variation in both extracellular dopamine tone and the intracellular availability of releasable dopamine. These data describe...

Mechanical analysis of the landing phase in heel-toe running

NARCIS (Netherlands)

Bobbert, Maarten F.; Yeadon, Maurice R.; Nigg, Benno M.

1992-01-01

Results of mechanical analyses of running may be helpful in the search for the etiology of running injuries. In this study a mechanical analysis was made of the landing phase of three trained heel-toe runners, running at their preferred speed and style. The body was modeled as a system of seven

The correspondence between stochastic mechanics and quantum mechanics on multiply connected configuration spaces

International Nuclear Information System (INIS)

Carlen, E.A.; Loffredo, M.I.

1989-01-01

We show how to obtain a complete correspondence between stochastic and quantum mechanics on multiply connected spaces. We do this by introducing a stochastic mechanical analog of the hydrodynamical circulation, relating it to the topological properties of the configuration space, and using it to constrain the stochastic mechanical variational principles. (orig.)

Cholecystokinin A receptor (CCKAR gene variation is associated with language lateralization.

Directory of Open Access Journals (Sweden)

Sebastian Ocklenburg

Full Text Available Schizophrenia is a psychiatric disorder associated with atypical handedness and language lateralization. However, the molecular mechanisms underlying these functional changes are still poorly understood. Therefore, the present study was aimed at investigating whether variation in schizophrenia-related genes modulates individual lateralization patterns. To this end, we genotyped 16 single nucleotide polymorphisms that have previously been linked to schizophrenia on a meta-analysis level in a sample of 444 genetically unrelated healthy participants and examined the association of these polymorphisms with handedness, footedness and language lateralization. We found a significant association of the cholecystokinin-A receptor (CCKAR gene variation rs1800857 and language lateralization assessed using the dichotic listening task. Individuals carrying the schizophrenia risk allele C of this polymorphism showed a marked reduction of the typical left-hemispheric dominance for language processing. Since the cholecystokinin A receptor is involved in dopamine release in the central nervous system, these findings suggest that genetic variation in this receptor may modulate language lateralization due to its impact on dopaminergic pathways.

Mechanical and Spectroscopic Analysis of Retrieved/Failed Dental Implants

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Umer Daood

2017-11-01

Full Text Available The purpose of this study was to examine surface alterations and bone formation on the surface of failed dental implants (Straumann [ST] and TiUnite [TiUn] removed due to any biological reason. In addition, failure analysis was performed to test mechanical properties. Dental implants (n = 38 from two manufacturers were collected and subjected to chemical cleaning. The presence of newly formed hydroxyapatite bone around failed implants was evaluated using micro-Raman spectroscopy. Scanning electron microscopy was used to identify surface defects. Mechanical testing was performed using a Minneapolis servo-hydraulic system (MTS along with indentation using a universal testing machine and average values were recorded. A statistical analysis of mechanical properties was done using an unpaired t test, and correlation between observed defects was evaluated using Chi-square (p = 0.05. Apatite-formation was evident in both implants, but was found qualitatively more in the ST group. No significant difference was found in indentation between the two groups (p > 0.05. The percentage of “no defects” was significantly lower in the ST group (71%. Crack-like and full-crack defects were observed in 49% and 39% of TiUn. The ST group showed 11,061 cycles to failure as compared with 10,021 cycles in the TiUnite group. Implant failure mechanisms are complex with a combination of mechanical and biological reasons and these factors are variable with different implant systems.

Antieigenvalue analysis for continuum mechanics, economics, and number theory

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Gustafson Karl

2016-01-01

Full Text Available My recent book Antieigenvalue Analysis, World-Scientific, 2012, presented the theory of antieigenvalues from its inception in 1966 up to 2010, and its applications within those forty-five years to Numerical Analysis, Wavelets, Statistics, Quantum Mechanics, Finance, and Optimization. Here I am able to offer three further areas of application: Continuum Mechanics, Economics, and Number Theory. In particular, the critical angle of repose in a continuum model of granular materials is shown to be exactly my matrix maximum turning angle of the stress tensor of the material. The important Sharpe ratio of the Capital Asset Pricing Model is now seen in terms of my antieigenvalue theory. Euclid’s Formula for Pythagorean triples becomes a special case of my operator trigonometry.

Dynamic mechanical analysis of compatibilizer effect on the mechanical properties of wood flour/high-density polyethylene composites

Science.gov (United States)

Mehdi Behzad; Medhi Tajvidi; Ghanbar Ehrahimi; Robert H. Falk

2004-01-01

In this study, effect of MAPE (maleic anhydride polyethylene) as the compatibilizer on the mechanical properties of wood-flour polyethylene composites has been investigated by using Dynamic Mechanical Analysis (DMA). Composites were made at 25% and 50% by weight fiber contents and 1% and 2% compatibilizer respectively. Controls were also made at the same fiber contents...

Challenges from variation across regions in cost effectiveness analysis in multi-regional clinical trials

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Yunbo Chu

2016-10-01

Full Text Available Economic evaluation in the form of cost-effectiveness analysis has become a popular means to inform decisions in healthcare. With multi-regional clinical trials in a global development program becoming a new venue for drug efficacy testing in recent decades, questions in methods for cost-effectiveness analysis in the multi-regional clinical trials setting also emerge. This paper addresses some challenges from variation across regions in cost effectiveness analysis in multi-regional clinical trials. Several discussion points are raised for further attention and a multi-regional clinical trial example is presented to illustrate the implications in industrial application. A general message is delivered to call for a depth discussion by all stakeholders to reach an agreement on a good practice in cost-effectiveness analysis in the multi-regional clinical trials. Meanwhile, we recommend an additional consideration of cost-effectiveness analysis results based on the clinical evidence from a certain homogeneous population as sensitivity or scenario analysis upon data availability.

Variational integrators in plasma physics

International Nuclear Information System (INIS)

Kraus, Michael

2013-01-01

To a large extent, research in plasma physics is concerned with the description and analysis of energy and momentum transfer between different scales and different kinds of waves. In the numerical modelling of such phenomena it appears to be crucial to describe the transfer processes preserving the underlying conservation laws in order to prevent physically spurious solutions. In this work, special numerical methods, so called variational integrators, are developed for several models of plasma physics. Special attention is given to conservation properties like conservation of energy and momentum. By design, variational integrators are applicable to all systems that have a Lagrangian formulation. Usually, equations of motion are derived by Hamilton's action principle and then discretised. In the application of the variational integrator theory, the order of these steps is reversed. At first, the Lagrangian and the accompanying variational principle are discretised, such that discrete equations of motion can be obtained directly by applying the discrete variational principle to the discrete Lagrangian. The advantage of this approach is that the resulting discretisation automatically retains the conservation properties of the continuous system. Following an overview of the geometric formulation of classical mechanics and field theory, which forms the basis of the variational integrator theory, variational integrators are introduced in a framework adapted to problems from plasma physics. The applicability of variational integrators is explored for several important models of plasma physics: particle dynamics (guiding centre dynamics), kinetic theory (the Vlasov-Poisson system) and fluid theory (magnetohydrodynamics). These systems, with the exception of guiding centre dynamics, do not possess a Lagrangian formulation to which the variational integrator methodology is directly applicable. Therefore the theory is extended by linking it to Ibragimov's theory of

Mechanism investigation for poloxamer 188 raw material variation in cell culture.

Science.gov (United States)

Peng, Haofan; Ali, Amr; Lanan, Maureen; Hughes, Erik; Wiltberger, Kelly; Guan, Bing; Prajapati, Shashi; Hu, Weiwei

2016-05-01

Variability in poloxamer 188 (P188) raw material, which is routinely used in cell culture media to protect cells from hydrodynamic forces, plays an important role in the process performance. Even though tremendous efforts have been spent to understand the mechanism of poloxamer's protection, the root cause for lot-to-lot variation was not clear. A recent study reported that the low performance was not due to toxicity but inefficiency to protect cells (Peng et al., Biotechnol Prog. 2014;30:1411-1418). In this study, it was demonstrated for the first time that the addition of other surfactants even at a very low level can interfere with P188 resulting in a loss of efficiency. It was also found that the performance of P188 lots correlated well with its foam stability. Foam generated from low performing lots in baffled shaker flask lasts longer, which suggests that the components in the foam layers are different. The spiking of foam generated from a low performing lot into the media containing a high performance lot resulted in cell damage and low growth. Analytical studies using size exclusion chromatography (SEC) identified differences in high molecular weight (HMW) species present in the P188 lots. These differences are much clearer when comparing the HMW region of the SEC chromatogram of foam vs. bulk liquid samples. This study shows that low performing lots have enriched HMW species in foam samples due to high hydrophobicity, which can be potentially used as a screening assay. © 2016 American Institute of Chemical Engineers Biotechnol. Prog., 32:767-775, 2016. © 2016 American Institute of Chemical Engineers.

Intraspecific variation in social organization by genetic variation, developmental plasticity, social flexibility or entirely extrinsic factors.

Science.gov (United States)

Schradin, Carsten

2013-05-19

Previously, it was widely believed that each species has a specific social organization, but we know now that many species show intraspecific variation in their social organization. Four different processes can lead to intraspecific variation in social organization: (i) genetic variation between individuals owing to local adaptation (between populations) or evolutionarily stable strategies within populations; (ii) developmental plasticity evolved in long-term (more than one generation) unpredictable and short-term (one generation) predictable environments, which is mediated by organizational physiological effects during early ontogeny; (iii) social flexibility evolved in highly unpredictable environments, which is mediated by activational physiological effects in adults; (iv) entirely extrinsic factors such as the death of a dominant breeder. Variation in social behaviour occurs between individuals in the case of genetic variation and developmental plasticity, but within individuals in the case of social flexibility. It is important to study intraspecific variation in social organization to understand the social systems of species because it reveals the mechanisms by which species can adapt to changing environments, offers a useful tool to study the ultimate and proximate causes of sociality, and is an interesting phenomenon by itself that needs scientific explanation.

A variational approach to niche construction.

Science.gov (United States)

Constant, Axel; Ramstead, Maxwell J D; Veissière, Samuel P L; Campbell, John O; Friston, Karl J

2018-04-01

In evolutionary biology, niche construction is sometimes described as a genuine evolutionary process whereby organisms, through their activities and regulatory mechanisms, modify their environment such as to steer their own evolutionary trajectory, and that of other species. There is ongoing debate, however, on the extent to which niche construction ought to be considered a bona fide evolutionary force, on a par with natural selection. Recent formulations of the variational free-energy principle as applied to the life sciences describe the properties of living systems, and their selection in evolution, in terms of variational inference. We argue that niche construction can be described using a variational approach. We propose new arguments to support the niche construction perspective, and to extend the variational approach to niche construction to current perspectives in various scientific fields. © 2018 The Authors.

Experiments and video analysis in classical mechanics

CERN Document Server

de Jesus, Vitor L B

2017-01-01

This book is an experimental physics textbook on classical mechanics focusing on the development of experimental skills by means of discussion of different aspects of the experimental setup and the assessment of common issues such as accuracy and graphical representation. The most important topics of an experimental physics course on mechanics are covered and the main concepts are explored in detail. Each chapter didactically connects the experiment and the theoretical models available to explain it. Real data from the proposed experiments are presented and a clear discussion over the theoretical models is given. Special attention is also dedicated to the experimental uncertainty of measurements and graphical representation of the results. In many of the experiments, the application of video analysis is proposed and compared with traditional methods.

Extrapolating cosmic ray variations and impacts on life: Morlet wavelet analysis

Science.gov (United States)

Zarrouk, N.; Bennaceur, R.

2009-07-01

Exposure to cosmic rays may have both a direct and indirect effect on Earth's organisms. The radiation may lead to higher rates of genetic mutations in organisms, or interfere with their ability to repair DNA damage, potentially leading to diseases such as cancer. Increased cloud cover, which may cool the planet by blocking out more of the Sun's rays, is also associated with cosmic rays. They also interact with molecules in the atmosphere to create nitrogen oxide, a gas that eats away at our planet's ozone layer, which protects us from the Sun's harmful ultraviolet rays. On the ground, humans are protected from cosmic particles by the planet's atmosphere. In this paper we give estimated results of wavelet analysis from solar modulation and cosmic ray data incorporated in time-dependent cosmic ray variation. Since solar activity can be described as a non-linear chaotic dynamic system, methods such as neural networks and wavelet methods should be very suitable analytical tools. Thus we have computed our results using Morlet wavelets. Many have used wavelet techniques for studying solar activity. Here we have analysed and reconstructed cosmic ray variation, and we have better depicted periods or harmonics other than the 11-year solar modulation cycles.

Mechanical core coupling and reactors stability

International Nuclear Information System (INIS)

Suarez Antola, R.

2006-01-01

Structural parts of nuclear reactors are complex mechanical systems, able to vibrate with a set of proper frequencies when suitably excited. Cyclical variations in the strain state of the materials, including density perturbations, are produced. This periodic changes may affect reactor reactivity. But a variation in reactivity affects reactor thermal power, thus modifying the temperature field of the abovementiones materials. If the variation in temperature fields is fast enough, thermal-mechanical coupling may produce fast variations in strain states, and this, at its turn, modifies the reactivity, and so on. This coupling between mechanical vibrations of the structure and the materials of the core, with power oscillations of the reactor, not only may not be excluded a priori, but it seems that it has been present in some stage of the incidents or accidents that happened during the development of nuclear reactor technology. The purpose of the present communication is: (a) To review and generalize some mathematical models that were proposed in order to describe thermal-mechanical coupling in nuclear reactors. (b) To discuss some conditions in which significant instabilities could arise, including large amplitude power oscillations coupled with mechanical vibrations whose amplitudes are too small to be excluded by conventional criteria of mechanical design. Enough Certain aspects of thr physical safety of nuclear power reactors, that are objected by people that opposes to the renaissance of nucleoelectric generation, are discussed in the framework of the mathematical model proposed in this paper [es

Morphological and molecular variations induce mitochondrial dysfunction as a possible underlying mechanism of athletic amenorrhea.

Science.gov (United States)

Xiong, Ruo-Hong; Wen, Shi-Lei; Wang, Qiang; Zhou, Hong-Ying; Feng, Shi

2018-01-01

Female athletes may experience difficulties in achieving pregnancy due to athletic amenorrhea (AA); however, the underlying mechanisms of AA remain unknown. The present study focuses on the mitochondrial alteration and its function in detecting the possible mechanism of AA. An AA rat model was established by excessive swimming. Hematoxylin and eosin staining, and transmission electron microscopic methods were performed to evaluate the morphological changes of the ovary, immunohistochemical examinations and radioimmunoassays were used to detect the reproductive hormones and corresponding receptors. Reverse transcription-quantitative polymerase chain reaction (RT-qPCR) was used to test the mtDNA copy number. PCR and western blot analysis were used to test the expression of ND2. The change of morphological features of the rat ovaries revealed evident abnormalities. Particularly, the features of the mitochondria were markedly altered. In addition, reproductive hormones in the serum and tissues of AA rats were also detected to evaluate the function of the ovaries, and the levels of these hormones were significantly decreased. Furthermore, the mitochondrial DNA copy number (mtDNA) and expression of NADH dehydrogenase subunit 2 (ND2) were quantitated by qPCR or western blot analysis. Accordingly, the mtDNA copy number and expression of ND2 expression were markedly reduced in the AA rats. In conclusion, mitochondrial dysfunction in AA may affect the cellular energy supply and, therefore, result in dysfunction of the ovary. Thus, mitochondrial dysfunction may be considered as a possible underlying mechanism for the occurrence of AA.

Quantum mechanical analysis of fractal conductance fluctuations: a picture using self-similar periodic orbits

International Nuclear Information System (INIS)

Ogura, Tatsuo; Miyamoto, Masanori; Budiyono, Agung; Nakamura, Katsuhiro

2007-01-01

Fractal magnetoconductance fluctuations are often observed in experiments on ballistic quantum dots. Although the analysis of the exact self-affine fractal has been given by the semiclassical theory using self-similar periodic orbits in systems with a soft-walled potential with a saddle, there has been no corresponding quantum mechanical investigation. We numerically calculate the quantum conductance with use of the recursive Green's function method applied to open cavities characterized by a Henon-Heiles type potential. The conductance fluctuations show exact self-affinity just as in some of the experimental observations. The enlargement factor for the horizontal axis can be explained by the scaling factor of the area of self-similar periodic orbits, and therefore be attributed to the curvature of the saddle in the cavity potential. The fractal dimension obtained through the box counting method agrees with those evaluated with use of the Hurst exponent, and coincides with the semiclassical prediction. We further investigate the variation of the fractal dimension by changing the control parameters between the classical and quantum domains. (fast track communication)

Non-linear finite element analysis in structural mechanics

CERN Document Server

Rust, Wilhelm

2015-01-01

This monograph describes the numerical analysis of non-linearities in structural mechanics, i.e. large rotations, large strain (geometric non-linearities), non-linear material behaviour, in particular elasto-plasticity as well as time-dependent behaviour, and contact. Based on that, the book treats stability problems and limit-load analyses, as well as non-linear equations of a large number of variables. Moreover, the author presents a wide range of problem sets and their solutions. The target audience primarily comprises advanced undergraduate and graduate students of mechanical and civil engineering, but the book may also be beneficial for practising engineers in industry.

Mechanical analysis of non-uniform bi-directional functionally graded intelligent micro-beams using modified couple stress theory

Science.gov (United States)

Bakhshi Khaniki, Hossein; Rajasekaran, Sundaramoorthy

2018-05-01

This study develops a comprehensive investigation on mechanical behavior of non-uniform bi-directional functionally graded beam sensors in the framework of modified couple stress theory. Material variation is modelled through both length and thickness directions using power-law, sigmoid and exponential functions. Moreover, beam is assumed with linear, exponential and parabolic cross-section variation through the length using power-law and sigmoid varying functions. Using these assumptions, a general model for microbeams is presented and formulated by employing Hamilton’s principle. Governing equations are solved using a mixed finite element method with Lagrangian interpolation technique, Gaussian quadrature method and Wilson’s Lagrangian multiplier method. It is shown that by using bi-directional functionally graded materials in nonuniform microbeams, mechanical behavior of such structures could be affected noticeably and scale parameter has a significant effect in changing the rigidity of nonuniform bi-directional functionally graded beams.

Schizophrenia risk from complex variation of complement component 4

NARCIS (Netherlands)

Sekar, Aswin; Bialas, Allison R.; de Rivera, Heather; Davis, Avery; Hammond, Timothy R.; Kamitaki, Nolan; Tooley, Katherine; Presumey, Jessy; Baum, Matthew; van Doren, Vanessa; Genovese, Giulio; Rose, Samuel A.; Handsaker, Robert E.; Daly, Mark J.; Carroll, Michael C.; Stevens, Beth; McCarroll, Steven A.; Ripke, Stephan; Neale, Benjamin M.; Corvin, Aiden; Walters, James T. R.; Farh, Kai-How; Holmans, Peter A.; Lee, Phil; Bulik-Sullivan, Brendan; Collier, David A.; Huang, Hailiang; Pers, Tune H.; Agartz, Ingrid; Agerbo, Esben; Albus, Margot; Alexander, Madeline; Amin, Farooq; Bacanu, Silviu A.; Begemann, Martin; Belliveau, Richard A.; Bene, Judit; Bergen, Sarah E.; Bevilacqua, Elizabeth; Bigdeli, Tim B.; Black, Donald W.; Bruggeman, Richard; Buccola, Nancy G.; Buckner, Randy L.; Byerley, William; Cahn, Wiepke; Cai, Guiqing; Cairns, Murray J.; Campion, Dominique; de Haan, Lieuwe

2016-01-01

Schizophrenia is a heritable brain illness with unknown pathogenic mechanisms. Schizophrenia's strongest genetic association at a population level involves variation in the major histocompatibility complex (MHC) locus, but the genes and molecular mechanisms accounting for this have been challenging

Molecular technology and antigenic variation among intraerythrocytic hemoparasites: do we see reality?

Science.gov (United States)

Allred, D R

2001-11-22

Antigenic variation is one mechanism of immune evasion utilized by many microorganisms--encompassing such broad evolutionary groups as viruses, bacteria, and protozoa--to survive the onslaught of a specifically activated host immune system. Because of its importance to the survival of many infectious agents there is considerable interest in understanding this phenomenon. With knowledge of the molecular mechanisms by which these microbes deliberately manipulate their genomes, it may be possible to disrupt the molecular machinery of the responsible genetic mechanisms. Among intraerythrocytic parasites, genetic mechanisms that have been observed or postulated to control antigenic variation include segmental gene conversion, epigenetically controlled in situ transcriptional switching, alterations of chromosomal structure associated with transcriptional control, and recombination during sexual reproduction. Likely, more than one type of mechanism is used by all organisms that undergo antigenic variation. In this paper, both the observed mechanisms and some of the molecular technology used to detect these mechanisms are discussed. While often seemingly straightforward from a technical standpoint, sometimes subtle differences in the methods used to study this process may affect what is observed. Some examples of this phenomenon are discussed in the context of a small selection of intraerythrocytic parasites.

Sensitivity analysis in oxidation ditch modelling: the effect of variations in stoichiometric, kinetic and operating parameters on the performance indices

NARCIS (Netherlands)

Abusam, A.A.A.; Keesman, K.J.; Straten, van G.; Spanjers, H.; Meinema, K.

2001-01-01

This paper demonstrates the application of the factorial sensitivity analysis methodology in studying the influence of variations in stoichiometric, kinetic and operating parameters on the performance indices of an oxidation ditch simulation model (benchmark). Factorial sensitivity analysis

Clinical analysis on 159 cases of mechanical ocular trauma

OpenAIRE

Zi-Yao Liu; Ya-Zhi Fan; Yu-Ping Zheng; Jian-Ming Wang

2013-01-01

AIM: To provide the basis of security guidance and decreasing the incidence through a general investigation of the mechanical ocular trauma among all the common causes, occasions where getting hurt as well as the characteristics of the high-risk group, and by further analysis and monitoring of the clinical cases and follow-up visit, study the related key factors of influencing the prognosis statistically. METHODS: The data of the 159 cases with mechanical ocular trauma were recorded.RESULTS: ...

Solar and lunar daily geomagnetic variations at Dourbes

International Nuclear Information System (INIS)

De Meyer, F.

1980-01-01

Spectral analysis of the Dourbes H component hourly data from the period 1960-1978 revealed the existence of a number of minor terms, in addition to the main solar and lunar peaks. The relative amplitudes of oscillations in the geomagnetic spectrum are unrelated with those predicted through lunar tide theory. The minor terms agree more closely with the 27-day amplitude modulation mechanism. A high frequency resolution power spectrum clearly shows the splitting of the solar diurnal and semi-diurnal line, and even of the lunar semi-diurnal line by the annual variation and its harmonics. The correlation between the amplitude of the M 2 wave and the mean sunspot number is of no significance. (author)

Quantitative Analysis of Mixtures of Monoprotic Acids Applying Modified Model-Based Rank Annihilation Factor Analysis on Variation Matrices of Spectrophotometric Acid-Base Titrations

Directory of Open Access Journals (Sweden)

Ebrahim Ghorbani-Kalhor

2015-04-01

Full Text Available In the current work, a new version of rank annihilation factor analysis was developedto circumvent the rank deficiency problem in multivariate data measurements.Simultaneous determination of dissociation constant and concentration of monoprotic acids was performed by applying model-based rank annihilation factor analysis on variation matrices of spectrophotometric acid-base titrations data. Variation matrices can be obtained by subtracting first row of data matrix from all rows of the main data matrix. This method uses variation matrices instead of multivariate spectrophotometric acid-base titrations matrices to circumvent the rank deficiency problem in the rank quantitation step. The applicability of this approach was evaluated by simulated data at first stage, then the binary mixtures of ascorbic and sorbic acids as model compounds were investigated by the proposed method. At the end, the proposed method was successfully applied for resolving the ascorbic and sorbic acid in an orange juice real sample. Therefore, unique results were achieved by applying rank annihilation factor analysis on variation matrix and using hard soft model combination advantage without any problem and difficulty in rank determination. Normal 0 false false false EN-US X-NONE AR-SA /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-parent:""; mso-padding-alt:0cm 5.4pt 0cm 5.4pt; mso-para-margin-top:0cm; mso-para-margin-right:0cm; mso-para-margin-bottom:10.0pt; mso-para-margin-left:0cm; line-height:115%; mso-pagination:widow-orphan; font-size:11.0pt; font-family:"Calibri","sans-serif"; mso-ascii-font-family:Calibri; mso-ascii-theme-font:minor-latin; mso-hansi-font-family:Calibri; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:Arial; mso-bidi-theme-font:minor-bidi; mso-bidi-language:AR-SA;}    

New Structural Representation and Digital-Analysis Platform for Symmetrical Parallel Mechanisms

Directory of Open Access Journals (Sweden)

Wenao Cao

2013-05-01

Full Text Available Abstract An automatic design platform capable of automatic structural analysis, structural synthesis and the application of parallel mechanisms will be a great aid in the conceptual design of mechanisms, though up to now such a platform has only existed as an idea. The work in this paper constitutes part of such a platform. Based on the screw theory and a new structural representation method proposed here which builds a one-to-one correspondence between the strings of representative characters and the kinematic structures of symmetrical parallel mechanisms (SPMs, this paper develops a fully-automatic approach for mobility (degree-of-freedom analysis, and further establishes an automatic digital-analysis platform for SPMs. With this platform, users simply have to enter the strings of representative characters, and the kinematic structures of the SPMs will be generated and displayed automatically, and the mobility and its properties will also be analysed and displayed automatically. Typical examples are provided to show the effectiveness of the approach.

Frequency variations of discrete cranial traits in major human populations. I. Supernumerary ossicle variations.

Science.gov (United States)

Hanihara, T; Ishida, H

2001-06-01

Four supernumerary ossicle variations-the ossicle at the lambda, the parietal notch bone, the asterionic bone, and the occipitomastoid bone-were examined for laterality differences, intertrait correlations, sex differences, and between group variations in the samples from around the world. Significant laterality differences were not detected in almost all samples. In some pairs of traits, significant association of occurrence were found. Several geographic samples were sexually dimorphic with respect to the asterionic bone and to a lesser extent for the parietal notch bone. East/Northeast Asians including the Arctic populations in general had lower frequencies of the 4 accessory ossicles. Australians, Melanesians and the majority of the New World peoples, on the other hand, generally had high frequencies. In the western hemisphere of the Old World, Subsaharan Africans had relatively high frequencies. Except for the ossicle at the lambda, the distribution pattern in incidence showed clinal variation from south to north. Any identifiable adaptive value related to environmental or subsistence factors may be expressed in such clinal variation. This may allow us to hypothesise that not only mechanical factors but a founder effect, genetic drift, and population structure could have been the underlying causes for interregional variation and possible clines in the incidences of the accessory ossicles.

Numerical analysis of thermo-hydro-mechanical (THM) processes in the clay based material

Energy Technology Data Exchange (ETDEWEB)

Wang, Xuerui

2016-10-06

conductivity on the degree of water saturation, the dependency of the thermal effects on the water retention behaviour, and the dependency of the effects of the pore pressure variation on the permeability and the anisotropic swelling/shrinkage behaviour have been intensively analysed and the corresponding numerical models to consider those coupling effects have been developed. The developed numerical model has been applied to simulate the laboratory and in situ heating experiments on the bentonite and clay rock at different scales. Firstly the laboratory heating experiment on Callovo-Oxfordian Clay (COX) and the laboratory long-term heating and hydration experiment on MX80 pellets were simulated. Based on the knowledge from the numerical analysis of the laboratory experiments, a 1:2 scale in situ heating experiment of an integrated system of the bentonite engineered barrier system (EBS) in the Opalinus Clay host rock was simulated. All the relevant operation phases were considered in the modelling. Besides, the modelling was extended to 50 years after the heat shut-down with the aim of predicting the long-term behaviours. Additionally, variation calculations were carried out to investigate the effects of the storage capacity of the Opalinus Clay on the thermally induced hydraulic response. In the long-term modelling, the effects of different saturated water permeabilities of buffer material on the resaturation process were analysed. Based on the current researches and model developments, the observed THM behaviours of the bentonite buffer and the clay rock, that is, the measured evolution of temperature, pore pressure, humidity, swelling pressure, and so on in the laboratory and in situ experiments can be reproduced and interpreted well. It is proved that by using both a non-isothermal multiphase flow model and a non-isothermal Richards flow model combined with the corresponding thermal and mechanical models, the major THM behaviours can be captured. It is validated that the

Numerical analysis of thermo-hydro-mechanical (THM) processes in the clay based material

International Nuclear Information System (INIS)

Wang, Xuerui

2016-01-01

conductivity on the degree of water saturation, the dependency of the thermal effects on the water retention behaviour, and the dependency of the effects of the pore pressure variation on the permeability and the anisotropic swelling/shrinkage behaviour have been intensively analysed and the corresponding numerical models to consider those coupling effects have been developed. The developed numerical model has been applied to simulate the laboratory and in situ heating experiments on the bentonite and clay rock at different scales. Firstly the laboratory heating experiment on Callovo-Oxfordian Clay (COX) and the laboratory long-term heating and hydration experiment on MX80 pellets were simulated. Based on the knowledge from the numerical analysis of the laboratory experiments, a 1:2 scale in situ heating experiment of an integrated system of the bentonite engineered barrier system (EBS) in the Opalinus Clay host rock was simulated. All the relevant operation phases were considered in the modelling. Besides, the modelling was extended to 50 years after the heat shut-down with the aim of predicting the long-term behaviours. Additionally, variation calculations were carried out to investigate the effects of the storage capacity of the Opalinus Clay on the thermally induced hydraulic response. In the long-term modelling, the effects of different saturated water permeabilities of buffer material on the resaturation process were analysed. Based on the current researches and model developments, the observed THM behaviours of the bentonite buffer and the clay rock, that is, the measured evolution of temperature, pore pressure, humidity, swelling pressure, and so on in the laboratory and in situ experiments can be reproduced and interpreted well. It is proved that by using both a non-isothermal multiphase flow model and a non-isothermal Richards flow model combined with the corresponding thermal and mechanical models, the major THM behaviours can be captured. It is validated that the

Variational Methods for Discontinuous Structures : Applications to Image Segmentation, Continuum Mechanics

CERN Document Server

Tomarelli, Franco

1996-01-01

In recent years many researchers in material science have focused their attention on the study of composite materials, equilibrium of crystals and crack distribution in continua subject to loads. At the same time several new issues in computer vision and image processing have been studied in depth. The understanding of many of these problems has made significant progress thanks to new methods developed in calculus of variations, geometric measure theory and partial differential equations. In particular, new technical tools have been introduced and successfully applied. For example, in order to describe the geometrical complexity of unknown patterns, a new class of problems in calculus of variations has been introduced together with a suitable functional setting: the free-discontinuity problems and the special BV and BH functions. The conference held at Villa Olmo on Lake Como in September 1994 spawned successful discussion of these topics among mathematicians, experts in computer science and material scientis...

NOT ALL SINGLE LEG SQUATS ARE EQUAL: A BIOMECHANICAL COMPARISON OF THREE VARIATIONS.

Science.gov (United States)

Khuu, Anne; Foch, Eric; Lewis, Cara L

2016-04-01

The single leg squat (SLS) is a functional task used by practitioners to evaluate and treat multiple pathologies of the lower extremity. Variations of the SLS may have different neuromuscular and biomechanical demands. The effect of altering the non-stance leg position during the SLS on trunk, pelvic, and lower extremity mechanics has not been reported. The purpose of this study was to compare trunk, pelvic, hip, knee, and ankle kinematics and hip, knee, and ankle kinetics of three variations of the SLS using different non-stance leg positions: SLS-Front, SLS-Middle, and SLS-Back. Sixteen healthy women performed the three SLS tasks while data were collected using a motion capture system and force plates. Joint mechanics in the sagittal, frontal, and transverse planes were compared for the SLS tasks using a separate repeated-measures analysis of variance (ANOVA) for each variable at two analysis points: peak knee flexion (PKF) and 60 ° of knee flexion (60KF). Different non-stance leg positions during the SLS resulted in distinct movement patterns and moments at the trunk, pelvis, and lower extremity. At PKF, SLS-Back exhibited the greatest kinematic differences (p < 0.05) from SLS-Front and SLS-Middle with greater ipsilateral trunk flexion, pelvic anterior tilt and drop, hip flexion and adduction, and external rotation as well as less knee flexion and abduction. SLS-Back also showed the greatest kinetic differences (p < 0.05) from SLS-Front and SLS-Middle with greater hip external rotator moment and knee extensor moment as well as less hip extensor moment and knee adductor moment at PKF. At 60KF, the findings were similar except at the knee. The mechanics of the trunk, pelvis, and lower extremity during the SLS were affected by the position of the non-stance leg in healthy females. Practitioners can use these findings to distinguish between SLS variations and to select the appropriate SLS for assessment and rehabilitation. 3.

Interpretation of engine cycle-to-cycle variation by chaotic time series analysis

Energy Technology Data Exchange (ETDEWEB)

Daw, C.S.; Kahl, W.K.

1990-01-01

In this paper we summarize preliminary results from applying a new mathematical technique -- chaotic time series analysis (CTSA) -- to cylinder pressure data from a spark-ignition (SI) four-stroke engine fueled with both methanol and iso-octane. Our objective is to look for the presence of deterministic chaos'' dynamics in peak pressure variations and to investigate the potential usefulness of CTSA as a diagnostic tool. Our results suggest that sequential peak cylinder pressures exhibit some characteristic features of deterministic chaos and that CTSA can extract previously unrecognized information from such data. 18 refs., 11 figs., 2 tabs.

Cartilaginous Metabolomic Study Reveals Potential Mechanisms of Osteophyte Formation in Osteoarthritis.

Science.gov (United States)

Xu, Zhongwei; Chen, Tingmei; Luo, Jiao; Ding, Shijia; Gao, Sichuan; Zhang, Jian

2017-04-07

Osteophyte is one of the inevitable consequences of progressive osteoarthritis with the main characteristics of cartilage degeneration and endochondral ossification. The pathogenesis of osteophyte formation is not fully understood to date. In this work, metabolomic approaches were employed to explore potential mechanisms of osteophyte formation by detecting metabolic variations between extracts of osteophyte cartilage tissues (n = 32) and uninvolved control cartilage tissues (n = 34), based on the platform of ultraperformance liquid chromatography tandem quadrupole time-of-flight mass spectrometry, as well as the use of multivariate statistic analysis and univariate statistic analysis. The osteophyte group was significantly separated from the control group by the orthogonal partial least-squares discriminant analysis models, indicating that metabolic state of osteophyte cartilage had been changed. In total, 28 metabolic variations further validated by mass spectrum (MS) match, tandom mass spectrum (MS/MS) match, and standards match mainly included amino acids, sulfonic acids, glycerophospholipids, and fatty acyls. These metabolites were related to some specific physiological or pathological processes (collagen dissolution, boundary layers destroyed, self-restoration triggered, etc.) which might be associated with the procedure of osteophyte formation. Pathway analysis showed phenylalanine metabolism (PI = 0.168, p = 0.004) was highly correlative to this degenerative process. Our findings provided a direction for targeted metabolomic study and an insight into further reveal the molecular mechanisms of ostophyte formation.

Solar ultraviolet irradiance variations: a review

International Nuclear Information System (INIS)

Lean, J.

1987-01-01

Despite the geophysical importance of solar ultraviolet radiation, specific aspects of its temporal variations have not yet been adequately determined experimentally, nor are the mechanisms for the variability completely understood. Satellite observations have verified the reality of solar ultraviolet irradiance variations over time scales of days and months, and model calculations have confirmed the association of these short-term variations with the evolution and rotation of regions of enhanced magnetic activity on the solar disc. However, neither rocket nor satellite measurements have yet been made with sufficient accuracy and regularity to establish unequivocally the nature of the variability over the longer time of the 11-year solar cycle. The comparative importance for the long-term variations of local regions of enhanced magnetic activity and global scale activity perturbations is still being investigated. Solar ultraviolet irradiance variations over both short and long time scales are reviewed, with emphasis on their connection to solar magnetic activity. Correlations with ground-based measures of solar variability are examined because of the importance of the ground-based observations as historical proxies of ultraviolet irradiance variations. Current problems in understanding solar ultraviolet irradiance variations are discussed, and the measurements planned for solar cycle 22, which may resolve these problems, are briefly described. copyright American Geophysical Union 1987

Analysis of Mechanical Stresses/Strains in Superconducting Wire

Science.gov (United States)

Barry, Matthew; Chen, Jingping; Zhai, Yuhu

2016-10-01

The optimization of superconducting magnet performance and development of high-field superconducting magnets will greatly impact the next generation of fusion devices. A successful magnet development, however, relies deeply on the understanding of superconducting materials. Among the numerous factors that impact a superconductor's performance, mechanical stress is the most important because of the extreme operation temperature and large electromagnetic forces. In this study, mechanical theory is used to calculate the stresses/strains in typical superconducting strands, which consist of a stabilizer, a barrier, a matrix and superconducting filaments. Both thermal loads and mechanical loads are included in the analysis to simulate operation conditions. Because this model simulates the typical architecture of major superconducting materials, such as Nb3Sn, MgB2, Bi-2212 etc., it provides a good overall picture for us to understand the behavior of these superconductors in terms of thermal and mechanical loads. This work was supported in part by the U.S. Department of Energy, Office of Science, Office of Workforce Development for Teachers and Scientists (WDTS) under the Science Undergraduate Laboratory Internship (SULI) program.

Some applications of the particle-in-a-box eigenfunctions: fast-convergent variational and related calculations

International Nuclear Information System (INIS)

Pathak, R.K.; Chandra, A.K.; Bhattacharyya, K.

1994-01-01

Eigenfunctions of the quantum mechanical particle-in-a-box problem are shown to lead to a new trigonometric expansion scheme with good convergence properties. This hitherto unexplored expansion strategy is found to be quite efficient in variational calculations and as an alternative to the Fourier series. Demonstrative computations involve a few one-dimensional models of confining potentials for bound states and pulses of various shapes in signal analysis. ((orig.))

Multivariate analysis of seasonal variation in the composition and thermal properties of butterfat with an emphasis on authenticity assessment

International Nuclear Information System (INIS)

Tomaszewska-Gras, J.

2016-01-01

The aim of this study was to analyze the seasonal variation in the composition and thermal properties of butterfat (BF) in order to evaluate the applicability of differential scanning calorimetry (DSC) for the authenticity assessment of butter. The composition of fatty acids (FA) and triacylglycerols (TAG) and the thermal properties of genuine BF purchased in the summer and in the winter from six producers were determined. Principal component analysis (PCA) was used to recognize variation and as a result, all BF samples were classified into two groups: one composed of mixed samples from the summer and winter and the other comprising only summer BF samples. DSC and GC analysis revealed that the group of only summer BF samples was characterized by lower melting temperatures and peak heights of low- and medium melting fractions and the highest proportions of unsaturated FAs (ΣC18:1, ΣC18:2, ΣC18:3). The results indicated that most of the variation in the composition and thermal properties was affected by summer BF samples, which may result from the alternative animal feeding systems employed in the summer season, i.e., pasture vs. indoor. Therefore, seasonal variation should be taken into consideration during the elaboration of the analytical method of authenticity assessment. [es

Statistical mechanical analysis of LMFBR fuel cladding tubes

International Nuclear Information System (INIS)

Poncelet, J.-P.; Pay, A.

1977-01-01

The most important design requirement on fuel pin cladding for LMFBR's is its mechanical integrity. Disruptive factors include internal pressure from mixed oxide fuel fission gas release, thermal stresses and high temperature creep, neutron-induced differential void-swelling as a source of stress in the cladding and irradiation creep of stainless steel material, corrosion by fission products. Under irradiation these load-restraining mechanisms are accentuated by stainless steel embrittlement and strength alterations. To account for the numerous uncertainties involved in the analysis by theoretical models and computer codes statistical tools are unavoidably requested, i.e. Monte Carlo simulation methods. Thanks to these techniques, uncertainties in nominal characteristics, material properties and environmental conditions can be linked up in a correct way and used for a more accurate conceptual design. First, a thermal creep damage index is set up through a sufficiently sophisticated clad physical analysis including arbitrary time dependence of power and neutron flux as well as effects of sodium temperature, burnup and steel mechanical behavior. Although this strain limit approach implies a more general but time consuming model., on the counterpart the net output is improved and e.g. clad temperature, stress and strain maxima may be easily assessed. A full spectrum of variables are statistically treated to account for their probability distributions. Creep damage probability may be obtained and can contribute to a quantitative fuel probability estimation

Coupled Mechanical-Electrochemical-Thermal Analysis of Failure Propagation in Lithium-ion Batteries

Energy Technology Data Exchange (ETDEWEB)

Zhang, Chao; Santhanagopalan, Shriram; Pesaran, Ahmad

2016-07-28

This is a presentation given at the 12th World Congress for Computational Mechanics on coupled mechanical-electrochemical-thermal analysis of failure propagation in lithium-ion batteries for electric vehicles.

Interpretation of biological and mechanical variations between the Lowry versus Bradford method for protein quantification.

Science.gov (United States)

Lu, Tzong-Shi; Yiao, Szu-Yu; Lim, Kenneth; Jensen, Roderick V; Hsiao, Li-Li

2010-07-01

The identification of differences in protein expression resulting from methodical variations is an essential component to the interpretation of true, biologically significant results. We used the Lowry and Bradford methods- two most commonly used methods for protein quantification, to assess whether differential protein expressions are a result of true biological or methodical variations. MATERIAL #ENTITYSTARTX00026; Differential protein expression patterns was assessed by western blot following protein quantification by the Lowry and Bradford methods. We have observed significant variations in protein concentrations following assessment with the Lowry versus Bradford methods, using identical samples. Greater variations in protein concentration readings were observed over time and in samples with higher concentrations, with the Bradford method. Identical samples quantified using both methods yielded significantly different expression patterns on Western blot. We show for the first time that methodical variations observed in these protein assay techniques, can potentially translate into differential protein expression patterns, that can be falsely taken to be biologically significant. Our study therefore highlights the pivotal need to carefully consider methodical approaches to protein quantification in techniques that report quantitative differences.

Empirical analysis of skin friction under variations of temperature

International Nuclear Information System (INIS)

Parra Alvarez, A. R. de la; Groot Viana, M. de

2014-01-01

In soil geotechnical characterization, strength parameters, cohesion (c) and internal friction angle (Φ) has been traditional measured without taking into account temperature, been a very important issue in energy geostructures. The present document analyzes the variation of these parameters in soil-concrete interface at different temperatures. A traditional shear strength case with a forced plane of failure was used. Several tests were carried out to determine the variation of skin friction in granular and cohesive oils with temperature. (Author)

Mechanical Analysis of the Nb3Sn Dipole Magnet HD1

International Nuclear Information System (INIS)

Ferracin, Paolo; Bartlett, Scott E.; Caspi, Shlomo; Dietderich, Daniel R.; Gourlay, Steve A.; Hannaford, Charles R.; Hafalia, Aurelio R.; Lietzke, Alan F.; Mattafirri, Sara; Sabbi, Gianluca

2005-01-01

The Superconducting Magnet Group at Lawrence Berkeley National Laboratory (LBNL) has recently fabricated and tested HD1, a Nb3Sn dipole magnet. The magnet reached a 16 T field, and exhibited training quenches in the end regions and in the straight section. After the test, HD1 was disassembled and inspected, and a detailed 3D finite element mechanical analysis was done to investigate for possible quench triggers. The study led to minor modifications to mechanical structure and assembly procedure, which were verified in a second test (HD1b). This paper presents the results of the mechanical analysis, including strain gauge measurements and coil visual inspection. The adjustments implemented in the magnet structure are reported and their effect on magnet training discussed

Mechanical analysis of the Nb3Sn dipole magnet HD1

International Nuclear Information System (INIS)

Ferracin, Paolo; Bartlett, Scott E.; Caspi, Shlomo; Dietderich, Daniel R.; Gourlay, Steve A.; Hannaford, Carles R.; Hafalia, Aurelio R.; Lietzke, Alan F.; Mattafirri, Sara; Sabbi, Gianluca

2005-01-01

The Superconducting Magnet Group at Lawrence Berkeley National Laboratory (LBNL) has recently fabricated and tested HD1, a Nb 3 Sn dipole magnet. The magnet reached a 16 T field, and exhibited training quenches in the end regions and in the straight section. After the test, HD1 was disassembled and inspected, and a detailed 3D finite element mechanical analysis was done to investigate for possible quench triggers. The study led to minor modifications to mechanical structure and assembly procedure, which were verified in a second test (HD1b). This paper presents the results of the mechanical analysis, including strain gauge measurements and coil visual inspection. The adjustments implemented in the magnet structure are reported and their effect on magnet training discussed

Genetic Variation in Cardiomyopathy and Cardiovascular Disorders.

Science.gov (United States)

McNally, Elizabeth M; Puckelwartz, Megan J

2015-01-01

With the wider deployment of massively-parallel, next-generation sequencing, it is now possible to survey human genome data for research and clinical purposes. The reduced cost of producing short-read sequencing has now shifted the burden to data analysis. Analysis of genome sequencing remains challenged by the complexity of the human genome, including redundancy and the repetitive nature of genome elements and the large amount of variation in individual genomes. Public databases of human genome sequences greatly facilitate interpretation of common and rare genetic variation, although linking database sequence information to detailed clinical information is limited by privacy and practical issues. Genetic variation is a rich source of knowledge for cardiovascular disease because many, if not all, cardiovascular disorders are highly heritable. The role of rare genetic variation in predicting risk and complications of cardiovascular diseases has been well established for hypertrophic and dilated cardiomyopathy, where the number of genes that are linked to these disorders is growing. Bolstered by family data, where genetic variants segregate with disease, rare variation can be linked to specific genetic variation that offers profound diagnostic information. Understanding genetic variation in cardiomyopathy is likely to help stratify forms of heart failure and guide therapy. Ultimately, genetic variation may be amenable to gene correction and gene editing strategies.

Impact of mechanical bowel preparation in elective colorectal surgery: A meta-analysis.

Science.gov (United States)

Rollins, Katie E; Javanmard-Emamghissi, Hannah; Lobo, Dileep N

2018-01-28

To analyse the effect of mechanical bowel preparation vs no mechanical bowel preparation on outcome in patients undergoing elective colorectal surgery. Meta-analysis of randomised controlled trials and observational studies comparing adult patients receiving mechanical bowel preparation with those receiving no mechanical bowel preparation, subdivided into those receiving a single rectal enema and those who received no preparation at all prior to elective colorectal surgery. A total of 36 studies (23 randomised controlled trials and 13 observational studies) including 21568 patients undergoing elective colorectal surgery were included. When all studies were considered, mechanical bowel preparation was not associated with any significant difference in anastomotic leak rates (OR = 0.90, 95%CI: 0.74 to 1.10, P = 0.32), surgical site infection (OR = 0.99, 95%CI: 0.80 to 1.24, P = 0.96), intra-abdominal collection (OR = 0.86, 95%CI: 0.63 to 1.17, P = 0.34), mortality (OR = 0.85, 95%CI: 0.57 to 1.27, P = 0.43), reoperation (OR = 0.91, 95%CI: 0.75 to 1.12, P = 0.38) or hospital length of stay (overall mean difference 0.11 d, 95%CI: -0.51 to 0.73, P = 0.72), when compared with no mechanical bowel preparation, nor when evidence from just randomized controlled trials was analysed. A sub-analysis of mechanical bowel preparation vs absolutely no preparation or a single rectal enema similarly revealed no differences in clinical outcome measures. In the most comprehensive meta-analysis of mechanical bowel preparation in elective colorectal surgery to date, this study has suggested that the use of mechanical bowel preparation does not affect the incidence of postoperative complications when compared with no preparation. Hence, mechanical bowel preparation should not be administered routinely prior to elective colorectal surgery.

Hospital Variation in Early Tracheostomy in the United States: A Population-Based Study.

Science.gov (United States)

Mehta, Anuj B; Cooke, Colin R; Wiener, Renda Soylemez; Walkey, Allan J

2016-08-01

Controversy exists regarding perceived benefits of early tracheostomy to facilitate weaning among mechanically ventilated patients, potentially leading to significant practice-pattern variation with implications for outcomes and resource utilization. We sought to determine practice-pattern variation and outcomes associated with tracheostomy timing in the United States. In a retrospective cohort study, we identified mechanically ventilated patients with the most common causes of respiratory failure leading to tracheostomy: pneumonia/sepsis and trauma. "Early tracheostomy" was performed within the first week of mechanical ventilation. We determined between-hospital variation in early tracheostomy utilization and the association of early tracheostomy with patient outcomes using hierarchical regression. 2012 National Inpatient Sample. A total of 6,075 pneumonia/sepsis patients and 12,030 trauma patients with tracheostomy. None. Trauma patients were twice as likely as pneumonia/sepsis patients to receive early tracheostomy (44.5% vs 21.7%; p tracheostomy-to-total-tracheostomy ratios was associated with increased risk for tracheostomy among mechanically ventilated trauma patients (adjusted odds ratio = 1.04; 95% CI, 1.01-1.07) but not pneumonia/sepsis (adjusted odds ratio =1.00; 95% CI, 0.98-1.02). We observed greater between-hospital variation in early tracheostomy rates among trauma patients (21.9-81.9%) compared with pneumonia/sepsis (14.9-38.3%; p tracheostomy had fewer feeding tube procedures and higher odds of discharge home. Early tracheostomy is potentially overused among mechanically ventilated trauma patients, with nearly half of tracheostomies performed within the first week of mechanical ventilation and large unexplained hospital variation, without clear benefits. Future studies are needed to characterize potentially differential benefits for early tracheostomy between disease subgroups and to investigate factors driving hospital variation in tracheostomy

Genetic analysis of variation in human meiotic recombination.

Directory of Open Access Journals (Sweden)

Reshmi Chowdhury

2009-09-01

Full Text Available The number of recombination events per meiosis varies extensively among individuals. This recombination phenotype differs between female and male, and also among individuals of each gender. In this study, we used high-density SNP genotypes of over 2,300 individuals and their offspring in two datasets to characterize recombination landscape and to map the genetic variants that contribute to variation in recombination phenotypes. We found six genetic loci that are associated with recombination phenotypes. Two of these (RNF212 and an inversion on chromosome 17q21.31 were previously reported in the Icelandic population, and this is the first replication in any other population. Of the four newly identified loci (KIAA1462, PDZK1, UGCG, NUB1, results from expression studies provide support for their roles in meiosis. Each of the variants that we identified explains only a small fraction of the individual variation in recombination. Notably, we found different sequence variants associated with female and male recombination phenotypes, suggesting that they are regulated by different genes. Characterization of genetic variants that influence natural variation in meiotic recombination will lead to a better understanding of normal meiotic events as well as of non-disjunction, the primary cause of pregnancy loss.

Variational problems arising in classical mechanics and nonlinear elasticity

International Nuclear Information System (INIS)

Spencer, P.

1999-01-01

In this thesis we consider two different classes of variational problems. First, one-dimensional problems arising from classical mechanics where the problem is to determine whether there is a unique function η 0 (x) which minimises the energy functional of the form I(η) = ∫ a b L(x,η(x), η'(x)) dx. We will investigate uniqueness by making a change of dependent and independent variables and showing that for a class of integrands L with a particular kind of scaling invariance the resulting integrand is completely convex. The change of variables arises by applying results from Lie group theory as applied in the study of differential equations and this work is motivated by [60] and [68]. Second, the problem of minimising energy functionals of the form E(u) = ∫ A W(∇u(x)) dx in the case of a nonlinear elastic body occupying an annular region A contains R 2 with u : A-bar → A-bar. This work is motivated by [57] (in particular the example of paragraph 4). We will consider rotationally symmetric deformations satisfying prescribed boundary conditions. We will show the existence of minimisers for stored energy functions of the form W(F) = g-tilde(vertical bar-F-vertical bar, det(F)) in a class of general rotationally symmetric deformations of a compressible annulus and for stored energy functions of the form W(F) = g-bar(vertical bar-F-vertical bar) in a class of rotationally symmetric deformations of an incompressible annulus. We will also show that in each case the minimisers are solutions of the full equilibrium equations. A model problem will be considered where the energy functional is the Dirichlet integral and it will be shown that the rotationally symmetric solution obtained is a minimiser among admissible non-rotationally symmetric deformations. In the case of an incompressible annulus, we will consider the Dirichlet integral as the energy functional and show that the rotationally symmetric equilibrium solutions in this case are weak local minimisers in

A genome-wide analysis of putative functional and exonic variation associated with extremely high intelligence.

Science.gov (United States)

Spain, S L; Pedroso, I; Kadeva, N; Miller, M B; Iacono, W G; McGue, M; Stergiakouli, E; Davey Smith, G; Putallaz, M; Lubinski, D; Meaburn, E L; Plomin, R; Simpson, M A

2016-08-01

Although individual differences in intelligence (general cognitive ability) are highly heritable, molecular genetic analyses to date have had limited success in identifying specific loci responsible for its heritability. This study is the first to investigate exome variation in individuals of extremely high intelligence. Under the quantitative genetic model, sampling from the high extreme of the distribution should provide increased power to detect associations. We therefore performed a case-control association analysis with 1409 individuals drawn from the top 0.0003 (IQ >170) of the population distribution of intelligence and 3253 unselected population-based controls. Our analysis focused on putative functional exonic variants assayed on the Illumina HumanExome BeadChip. We did not observe any individual protein-altering variants that are reproducibly associated with extremely high intelligence and within the entire distribution of intelligence. Moreover, no significant associations were found for multiple rare alleles within individual genes. However, analyses using genome-wide similarity between unrelated individuals (genome-wide complex trait analysis) indicate that the genotyped functional protein-altering variation yields a heritability estimate of 17.4% (s.e. 1.7%) based on a liability model. In addition, investigation of nominally significant associations revealed fewer rare alleles associated with extremely high intelligence than would be expected under the null hypothesis. This observation is consistent with the hypothesis that rare functional alleles are more frequently detrimental than beneficial to intelligence.

Molecular Darwinism: the contingency of spontaneous genetic variation.

Science.gov (United States)

Arber, Werner

2011-01-01

The availability of spontaneously occurring genetic variants is an important driving force of biological evolution. Largely thanks to experimental investigations by microbial geneticists, we know today that several different molecular mechanisms contribute to the overall genetic variations. These mechanisms can be assigned to three natural strategies to generate genetic variants: 1) local sequence changes, 2) intragenomic reshuffling of DNA segments, and 3) acquisition of a segment of foreign DNA. In these processes, specific gene products are involved in cooperation with different nongenetic elements. Some genetic variations occur fully at random along the DNA filaments, others rather with a statistical reproducibility, although at many possible sites. We have to be aware that evolution in natural ecosystems is of higher complexity than under most laboratory conditions, not at least in view of symbiotic associations and the occurrence of horizontal gene transfer. The encountered contingency of genetic variation can possibly best ensure a long-term persistence of life under steadily changing living conditions.

Trophic calculations reveal the mechanism of population-level variation in mercury concentrations between marine ecosystems: Case studies of two polar seabirds

International Nuclear Information System (INIS)

Brasso, Rebecka L.; Polito, Michael J.

2013-01-01

Highlights: • Ecosystem-specific baseline and consumer δ 15 N paired for population-specific trophic level. • Source of population-level variation in mercury exposure identified in two seabirds. • High mercury and trophic position suggests trophic driver of population-level variation. • Trophic similarities, differing mercury reveals geographic differences in bioavailability. -- Abstract: The incorporation of quantitative trophic level analysis in ecotoxicological studies provides explanatory power to identify the factors, trophic or environmental, driving population-level variation in mercury exposure at large geographic scales. In the Antarctic marine ecosystem, mercury concentrations and stable isotope values in Adélie penguins (Pygoscelis adeliae) were compared between the Antarctic Peninsula and the Ross Sea. Correcting tissue δ 15 N values for baseline δ 15 N values revealed population-level differences in trophic position which contributes to differences in mercury. Data from Thick-billed murres (Uria lomvia) were synthesized from published values from Baffin Bay and Svalbard to demonstrate the utility of baseline δ 15 N values in identifying differences in environmental mercury exposure independent of diet. Here, we demonstrate the importance of calculating population-specific trophic level data to uncover the source of variation in mercury concentrations between geographically distinct populations of marine predators

Sequence length variation, indel costs, and congruence in sensitivity analysis

DEFF Research Database (Denmark)

Aagesen, Lone; Petersen, Gitte; Seberg, Ole

2005-01-01

The behavior of two topological and four character-based congruence measures was explored using different indel treatments in three empirical data sets, each with different alignment difficulties. The analyses were done using direct optimization within a sensitivity analysis framework in which...... the cost of indels was varied. Indels were treated either as a fifth character state, or strings of contiguous gaps were considered single events by using linear affine gap cost. Congruence consistently improved when indels were treated as single events, but no congruence measure appeared as the obviously...... preferable one. However, when combining enough data, all congruence measures clearly tended to select the same alignment cost set as the optimal one. Disagreement among congruence measures was mostly caused by a dominant fragment or a data partition that included all or most of the length variation...

Batch variation between branchial cell cultures: An analysis of variance

DEFF Research Database (Denmark)

Hansen, Heinz Johs. Max; Grosell, M.; Kristensen, L.

2003-01-01

We present in detail how a statistical analysis of variance (ANOVA) is used to sort out the effect of an unexpected batch-to-batch variation between cell cultures. Two separate cultures of rainbow trout branchial cells were grown on permeable filtersupports ("inserts"). They were supposed...... and introducing the observed difference between batches as one of the factors in an expanded three-dimensional ANOVA, we were able to overcome an otherwisecrucial lack of sufficiently reproducible duplicate values. We could thereby show that the effect of changing the apical medium was much more marked when...... the radioactive lipid precursors were added on the apical, rather than on the basolateral, side. Theinsert cell cultures were obviously polarized. We argue that it is not reasonable to reject troublesome experimental results, when we do not know a priori that something went wrong. The ANOVA is a very useful...

Meiotic gene-conversion rate and tract length variation in the human genome.

Science.gov (United States)

Padhukasahasram, Badri; Rannala, Bruce

2013-02-27

Meiotic recombination occurs in the form of two different mechanisms called crossing-over and gene-conversion and both processes have an important role in shaping genetic variation in populations. Although variation in crossing-over rates has been studied extensively using sperm-typing experiments, pedigree studies and population genetic approaches, our knowledge of variation in gene-conversion parameters (ie, rates and mean tract lengths) remains far from complete. To explore variability in population gene-conversion rates and its relationship to crossing-over rate variation patterns, we have developed and validated using coalescent simulations a comprehensive Bayesian full-likelihood method that can jointly infer crossing-over and gene-conversion rates as well as tract lengths from population genomic data under general variable rate models with recombination hotspots. Here, we apply this new method to SNP data from multiple human populations and attempt to characterize for the first time the fine-scale variation in gene-conversion parameters along the human genome. We find that the estimated ratio of gene-conversion to crossing-over rates varies considerably across genomic regions as well as between populations. However, there is a great degree of uncertainty associated with such estimates. We also find substantial evidence for variation in the mean conversion tract length. The estimated tract lengths did not show any negative relationship with the local heterozygosity levels in our analysis.European Journal of Human Genetics advance online publication, 27 February 2013; doi:10.1038/ejhg.2013.30.

Variational formulation based analysis on growth of yield front in ...

African Journals Online (AJOL)

The present study investigates the growth of elastic-plastic front in rotating solid disks of non-uniform thickness having exponential and parabolic geometry variation. The problem is solved through an extension of a variational method in elastoplastic regime. The formulation is based on von-Mises yield criterion and linear ...

Mechanisms of subsidence for induced damage and techniques for analysis

International Nuclear Information System (INIS)

Drumm, E.C.; Bennett, R.M.; Kane, W.F.

1988-01-01

Structural damage due to mining induced subsidence is a function of the nature of the structure and its position on the subsidence profile. A point on the profile may be in the tensile zone, the compressive zone, or the no-deformation zone at the bottom of the profile. Damage to structures in the tension zone is primarily due to a reduction of support during vertical displacement of the ground surface, and to shear stresses between the soil and structure resulting from horizontal displacements. The damage mechanisms due to tension can be investigated effectively using a two-dimensional plane stress analysis. Structures in the compression zone are subjected to positive moments in the footing and large compressive horizontal stresses in the foundation walls. A plane strain analysis of the foundation wall is utilized to examine compression zone damage mechanisms. The structural aspects affecting each mechanism are identified and potential mitigation techniques are summarized

SSR allelic variation of rice variety Hangxiangnuo bred by space mutation

International Nuclear Information System (INIS)

Yang Tifeng; Liu Chuanguang; Pan Dajian; Fan Zhilan; Li Chen; Chen Jianyou; Liu Bin; Jiang Yijun; Gao Yun; Zhou Hanqin

2011-01-01

Hangxiangnuo, an indica fragrant glutinous rice mutant, was induced by space environment. Comparing with its wild type Nanfengnuo, the yield and blast resistance of Hangxiangnuo are improved significantly and the grain shape became slender and with fragrance. To understand the mechanisms of space mutation and identify the changes at molecular level associated with phenotypic variations, SSR allelic variation analysis were performed on Hangxiangnuo and Nanfengnuo in this study. The results showed that 45 loci were polymorphic among the 156 SSR loci tested throughout the genome, the frequency of variation was 28.85%. Among the polymorphic loci, 42 loci only showed variations in the molecular weight of the amplified bands, only on locus increased the number of amplification bands in Hangxiangnuo and two loci were differed by heterozygous loci (with two amplification bands at one locus) detected in Nanfengnuo and homozygous loci in Hangxiangnuo. It suggests that the change of some loci in mutants was due to the normal segregation and recombination of heterozygous loci of the wild type. The variation frequencies among different chromosomes were quite different, with the highest one at 50.00% detected on chromosomes 7, 8 and 12, and the lowest at 6.25% on chromosome 6. The polymorphic loci were clustered on chromosomes throughout the genome indicating that large DNA segments mutation is one of the major variation patterns induced by space environment. Some of reported QTLs involved in grain shape, yield, fragrance and blast resistance were found to be located exactly in the mutated regions. Therefore, further study is needed to confirm that these QTLs are responsible for the trait variations. (authors)

Microstructural variation through weld thickness and mechanical properties of peened friction stir welded 6061 aluminum alloy joints

Energy Technology Data Exchange (ETDEWEB)

Abdulstaar, Mustafa A., E-mail: mustafa.abdulstaar@gmail.com [Institute of Material Science and Engineering, Clausthal University of Technology, Agricolastr. 6, 38678 Clausthal-Zellerfeld (Germany); Al-Fadhalah, Khaled J. [Department of Mechanical Engineering, College of Engineering & Petroleum, Kuwait University, P.O. Box 5969, Safat 13060 (Kuwait); Wagner, Lothar [Institute of Material Science and Engineering, Clausthal University of Technology, Agricolastr. 6, 38678 Clausthal-Zellerfeld (Germany)

2017-04-15

The current study examined the effect of microstructure variation on the development of mechanical properties in friction stir welded joints of 6061-T6 aluminum alloy, which were subsequently processed by shot peening (SP). Following to FSW, fatigue specimens were extracted perpendicularly to the welding direction. Surface Skimming to 0.5 mm from crown and root sides of the joint was made and SP was later applied on the two sides using ceramic shots of two different Almen intensities of 0.18 mmA and 0.24 mmA. Microstructural examination by electron back scattered diffraction (EBSD) indicated variation in the grain refinement of the weld zone, with coarsest grains (5 μm) at the crown side and finest grains (2 μm) at the root side. Reduction of microhardness to 60 HV occurred in the weld zone for samples in FSW condition. Application of SP promoted significant strain hardening at the crown side, with Almen intensities of 0.24 mmA providing maximum increase in microhardness to 120 HV. On the contrary, only a maximum microhardness of 75 HV was obtained at the root side. The difference in strain hardening capability at the two sides was strongly dependent on grain size. The two Almen intensities produced similar distribution of compressive residual stresses in the subsurface regions that led to enhance the fatigue strength to the level of base metal for N ≥ 10{sup 5} cycles. Yet, the increase in fatigue strength was more pronounced with increasing Almen intensity to 0.24 mmA, demonstrating further enhancement by strain hardening. - Highlights: • Grain refinement was observed after friction stir welding of AA 6061-T6. • Reduction in microhardness and fatigue strength were obtained after welding. • Variation in grain refinement led to different hardening behavior after peening. • Shot peening induced beneficial compressive residual stresses. • Shot peening and surface skimming markedly improved the fatigue performance.

Self-potential variations preceding earthquakes in central california

International Nuclear Information System (INIS)

Corwin, R.F.; Morrison, H.G.

1977-01-01

Two earthquakes in central California were preceded by anomalous variations in the horizontal electric field (self-potential) of the earth. The first variation was an anomaly of 90 mV amplitude across electrode dipoles of 630 and 640 m, which began 55 days before an earthquake of M=5, located 37 km NW of the dipoles. The second variation had an amplitude of 4 mV across a 300 m dipole, and began 110 hours before an event of M=2.4 located on the San Andreas fault, 2.5 km from the dipole. Streaming potentials generated by the flow of groundwater into a dilatant zone are proposed as a possible mechanism for the observed variations

Origins of variation in conducted vasomotor responses

DEFF Research Database (Denmark)

Hald, Bjørn Olav; Welsh, Donald G.; Holstein-Rathlou, Niels-Henrik

2015-01-01

, the efficacy of conducted responses varies significantly between different initiating stimuli within the same vascular bed as well as between different vascular beds following the same stimulus. The differences have stimulated proposals of different mechanisms to account for the experimentally observed...... variation. Using a computational approach that allows for introduction of structural and electrophysiological heterogeneity, we systematically tested variations in both arteriolar electrophysiology and modes of stimuli. Within the same vessel, our simulations show that conduction efficacy is influenced...

Variational integrators in plasma physics

Energy Technology Data Exchange (ETDEWEB)

Kraus, Michael

2013-07-01

To a large extent, research in plasma physics is concerned with the description and analysis of energy and momentum transfer between different scales and different kinds of waves. In the numerical modelling of such phenomena it appears to be crucial to describe the transfer processes preserving the underlying conservation laws in order to prevent physically spurious solutions. In this work, special numerical methods, so called variational integrators, are developed for several models of plasma physics. Special attention is given to conservation properties like conservation of energy and momentum. By design, variational integrators are applicable to all systems that have a Lagrangian formulation. Usually, equations of motion are derived by Hamilton's action principle and then discretised. In the application of the variational integrator theory, the order of these steps is reversed. At first, the Lagrangian and the accompanying variational principle are discretised, such that discrete equations of motion can be obtained directly by applying the discrete variational principle to the discrete Lagrangian. The advantage of this approach is that the resulting discretisation automatically retains the conservation properties of the continuous system. Following an overview of the geometric formulation of classical mechanics and field theory, which forms the basis of the variational integrator theory, variational integrators are introduced in a framework adapted to problems from plasma physics. The applicability of variational integrators is explored for several important models of plasma physics: particle dynamics (guiding centre dynamics), kinetic theory (the Vlasov-Poisson system) and fluid theory (magnetohydrodynamics). These systems, with the exception of guiding centre dynamics, do not possess a Lagrangian formulation to which the variational integrator methodology is directly applicable. Therefore the theory is extended by linking it to Ibragimov's theory of

Structure variations of carbonizing lignin

International Nuclear Information System (INIS)

Otani, C.; Polidoro, H.A.; Otani, S.; Craievich, A.F.

1984-01-01

The studied lignin is a by-product of the process of ethanol production from eucaliptus. It was heat-treated under inert atmosphere conditions at increasing temperatures from 300C up to 2400C. The structural variations were studied by wide-angle X-ray diffraction, small-angle X-ray scattering and infrared absorption spectroscopy. The bulk and 'real' density of the compacted materials have also been determined as functions of the final temperature. These experimental results enabled us to establish a mechanism of structure variation based on the formation of a turbostratic graphite-like and porous structure within the initially amorphous lignin matrix. (Author) [pt

Genetic and Cytological Analyses of the Natural Variation of Seed Number per Pod in Rapeseed (Brassica napus L.

Directory of Open Access Journals (Sweden)

Yuhua Yang

2017-11-01

Full Text Available Seed number is one of the key traits related to plant evolution/domestication and crop improvement/breeding. In rapeseed germplasm, the seed number per pod (SNPP shows a very wide variation from several to nearly 30; however, the underlying causations/mechanisms for this variation are poorly known. In the current study, the genetic and cytological bases for the natural variation of SNPP in rapeseed was firstly and systematically investigated using the representative four high-SNPP and five low-SNPP lines. The results of self- or cross-pollination experiment between the high- and low-SNPP lines showed that the natural variation of SNPP was mainly controlled by maternal effect (mean = 0.79, followed by paternal effect (mean = 0.21. Analysis of the data using diploid seed embryo–cytoplasmic–maternal model further showed that the maternal genotype, embryo, and cytoplasm effects, respectively, explained 47.6, 35.2, and 7.5% of the genetic variance. In addition, the analysis of combining ability showed that for the SNPP of hybrid F1 was mainly determined by the general combining ability of parents (63.0%, followed by special combining ability of parental combination (37.0%. More importantly, the cytological observation showed that the SNPP difference between the high- and low-SNPP lines was attributable to the accumulative differences in its components. Of which, the number of ovules, the proportion of fertile ovules, the proportion of fertile ovules to be fertilized, and the proportion of fertilized ovules to develop into seeds accounted for 30.7, 18.2, 7.1, and 43.9%, respectively. The accordant results of both genetic and cytological analyses provide solid evidences and systematic insights to further understand the mechanisms underlying the natural variation of SNPP, which will facilitate the development of high-yield cultivars in rapeseed.

Variation Tolerant On-Chip Interconnects

CERN Document Server

Nigussie, Ethiopia Enideg

2012-01-01

This book presents design techniques, analysis and implementation of high performance and power efficient, variation tolerant on-chip interconnects.  Given the design paradigm shift to multi-core, interconnect-centric designs and the increase in sources of variability and their impact in sub-100nm technologies, this book will be an invaluable reference for anyone concerned with the design of next generation, high-performance electronics systems. Provides comprehensive, circuit-level explanation of high-performance, energy-efficient, variation-tolerant on-chip interconnect; Describes design techniques to mitigate problems caused by variation; Includes techniques for design and implementation of self-timed on-chip interconnect, delay variation insensitive communication protocols, high speed signaling techniques and circuits, bit-width independent completion detection and process, voltage and temperature variation tolerance.                          

Local mechanical spectroscopy with nanometer-scale lateral resolution

Science.gov (United States)

Oulevey, F.; Gremaud, G.; Sémoroz, A.; Kulik, A. J.; Burnham, N. A.; Dupas, E.; Gourdon, D.

1998-05-01

A new technique has been developed to probe the viscoelastic and anelastic properties of submicron phases of inhomogeneous materials. The measurement gives information related to the internal friction and to the variations of the dynamic modulus of nanometer-sized volumes. It is then the nanoscale equivalent to mechanical spectroscopy, a well-known macroscopic technique for materials studies, also sometimes called dynamic mechanical (thermal) analysis. The technique is based on a scanning force microscope, using the principle of scanning local-acceleration microscopy (SLAM), and allows the sample temperature to be changed. It is called variable-temperature SLAM, abbreviated T-SLAM. According to a recent proposition to systematize names of scanning probe microscope based methods, this technique should be included in the family of "mechanothermal analysis with scanning microscopy." It is suited for studying defect dynamics in nanomaterials and composites by locating the dissipative mechanisms in submicron phases. The primary and secondary relaxations, as well as the viscoplasticity, were observed in bulk PVC. The wide range of phenomena demonstrate the versatility of the technique. A still unexplained increase of the stiffness with increasing temperature was observed just below the glass transition. All of these observations, although their interpretation in terms of physical events is still tentative, are in agreement with global studies. This technique also permits one to image the variations of the local elasticity or of the local damping at a fixed temperature. This enables the study of, for instance, the homogeneity of phase transitions in multiphased materials, or of the interface morphologies and properties. As an illustration, the homogeneity of the glass transition temperature of PVC in a 50/50 wt % PVC/PB polymer blend has been demonstrated. Due to the small size of the probed volume, T-SLAM gives information on the mechanical properties of the near

Metabolic Model-Based Integration of Microbiome Taxonomic and Metabolomic Profiles Elucidates Mechanistic Links between Ecological and Metabolic Variation

Energy Technology Data Exchange (ETDEWEB)

Noecker, Cecilia; Eng, Alexander; Srinivasan, Sujatha; Theriot, Casey M.; Young, Vincent B.; Jansson, Janet K.; Fredricks, David N.; Borenstein, Elhanan; Sanchez, Laura M.

2015-12-22

Multiple molecular assays now enable high-throughput profiling of the ecology, metabolic capacity, and activity of the human microbiome. However, to date, analyses of such multi-omic data typically focus on statistical associations, often ignoring extensive prior knowledge of the mechanisms linking these various facets of the microbiome. Here, we introduce a comprehensive framework to systematically link variation in metabolomic data with community composition by utilizing taxonomic, genomic, and metabolic information. Specifically, we integrate available and inferred genomic data, metabolic network modeling, and a method for predicting community-wide metabolite turnover to estimate the biosynthetic and degradation potential of a given community. Our framework then compares variation in predicted metabolic potential with variation in measured metabolites’ abundances to evaluate whether community composition can explain observed shifts in the community metabolome, and to identify key taxa and genes contributing to the shifts. Focusing on two independent vaginal microbiome data sets, each pairing 16S community profiling with large-scale metabolomics, we demonstrate that our framework successfully recapitulates observed variation in 37% of metabolites. Well-predicted metabolite variation tends to result from disease-associated metabolism. We further identify several disease-enriched species that contribute significantly to these predictions. Interestingly, our analysis also detects metabolites for which the predicted variation negatively correlates with the measured variation, suggesting environmental control points of community metabolism. Applying this framework to gut microbiome data sets reveals similar trends, including prediction of bile acid metabolite shifts. This framework is an important first step toward a system-level multi-omic integration and an improved mechanistic understanding of the microbiome activity and dynamics in

XPS, UV–vis spectroscopy and AFM studies on removal mechanisms of Si-face SiC wafer chemical mechanical polishing (CMP)

International Nuclear Information System (INIS)

Zhou, Yan; Pan, Guoshun; Shi, Xiaolei; Xu, Li; Zou, Chunli; Gong, Hua; Luo, Guihai

2014-01-01

Highlights: • CMP removal mechanism of Si-face SiC wafer is investigated through XPS analysis. • UV–vis spectroscopy is used to study CMP removal mechanisms. • CMP removal model of Si-face SiC wafer is proposed. • The variations of atomic step morphology on ultra-smooth surface via AFM is studied. - Abstract: Chemical mechanical polishing (CMP) removal mechanisms of on-axis Si-face SiC wafer have been investigated through X-ray photoelectron spectroscopy (XPS), UV–visible (UV–vis) spectroscopy and atomic force microscopy (AFM). XPS results indicate that silicon oxide is formed on Si-face surface polished by the slurry including oxidant H 2 O 2 , but not that after immersing in H 2 O 2 solution. UV–vis spectroscopy curves prove that • OH hydroxyl radical could be generated only under CMP polishing by the slurry including H 2 O 2 and abrasive, so as to promote oxidation of Si-face to realize the effective removal; meanwhile, alkali KOH during CMP could induce the production of more radicals to improve the removal. On the other side, ultra-smooth polished surface with atomic step structure morphology and extremely low Ra of about 0.06 nm (through AFM) is obtained using the developed slurry with silica nanoparticle abrasive. Through investigating the variations of the atomic step morphology on the surface polished by different slurries, it's reveals that CMP removal mechanism involves a simultaneous process of surface chemical reaction and nanoparticle atomic scale abrasion

Age-Related Decline in the Variation of Dynamic Functional Connectivity: A Resting State Analysis

Directory of Open Access Journals (Sweden)

Yuanyuan Chen

2017-06-01

Full Text Available Normal aging is typically characterized by abnormal resting-state functional connectivity (FC, including decreasing connectivity within networks and increasing connectivity between networks, under the assumption that the FC over the scan time was stationary. In fact, the resting-state FC has been shown in recent years to vary over time even within minutes, thus showing the great potential of intrinsic interactions and organization of the brain. In this article, we assumed that the dynamic FC consisted of an intrinsic dynamic balance in the resting brain and was altered with increasing age. Two groups of individuals (N = 36, ages 20–25 for the young group; N = 32, ages 60–85 for the senior group were recruited from the public data of the Nathan Kline Institute. Phase randomization was first used to examine the reliability of the dynamic FC. Next, the variation in the dynamic FC and the energy ratio of the dynamic FC fluctuations within a higher frequency band were calculated and further checked for differences between groups by non-parametric permutation tests. The results robustly showed modularization of the dynamic FC variation, which declined with aging; moreover, the FC variation of the inter-network connections, which mainly consisted of the frontal-parietal network-associated and occipital-associated connections, decreased. In addition, a higher energy ratio in the higher FC fluctuation frequency band was observed in the senior group, which indicated the frequency interactions in the FC fluctuations. These results highly supported the basis of abnormality and compensation in the aging brain and might provide new insights into both aging and relevant compensatory mechanisms.

Reactor coolant pump testing using motor current signatures analysis

Energy Technology Data Exchange (ETDEWEB)

Burstein, N.; Bellamy, J.

1996-12-01

This paper describes reactor coolant pump motor testing carried out at Florida Power Corporation`s Crystal River plant using Framatome Technologies` new EMPATH (Electric Motor Performance Analysis and Trending Hardware) system. EMPATH{trademark} uses an improved form of Motor Current Signature Analysis (MCSA), technology, originally developed at Oak Ridge National Laboratories, for detecting deterioration in the rotors of AC induction motors. Motor Current Signature Analysis (MCSA) is a monitoring tool for motor driven equipment that provides a non-intrusive means for detecting the presence of mechanical and electrical abnormalities in the motor and the driven equipment. The base technology was developed at the Oak Ridge National Laboratory as a means for determining the affects of aging and service wear specifically on motor-operated valves used in nuclear power plant safety systems, but it is applicable to a broad range of electric machinery. MCSA is based on the recognition that an electric motor (ac or dc) driving a mechanical load acts as an efficient and permanently available transducer by sensing mechanical load variations, large and small, long-term and rapid, and converting them into variations in the induced current generated in the motor windings. The motor current variations, resulting from changes in load caused by gears, pulleys, friction, bearings, and other conditions that may change over the life of the motor, are carried by the electrical cables powering the motor and are extracted at any convenient location along the motor lead. These variations modulate the 60 Hz carrier frequency and appear as sidebands in the spectral plot.

Analysis of Idiom Variation in the Framework of Linguistic Subjectivity

Science.gov (United States)

Liu, Zhengyuan

2012-01-01

Idiom variation is a ubiquitous linguistic phenomenon which has raised a lot of research questions. The past approach was either formal or functional. Both of them did not pay much attention to cognitive factors of language users. By putting idiom variation in the framework of linguistic subjectivity, we have offered a new perspective in the…

Analysis of Pressure Variations in a Low-Pressure Nickel-Hydrogen Battery - Part 1.

Science.gov (United States)

Purushothaman, B K; Wainright, J S

2012-05-15

A low pressure nickel-hydrogen battery using either a metal hydride or gaseous hydrogen for H(2) storage has been developed for use in implantable neuroprosthetic devices. In this paper, pressure variations inside the cell for the gaseous hydrogen version are analyzed and correlated with oxygen evolution side reaction at the end of charging, the recombination of oxygen with hydrogen during charging and a subsequent rest period, and the self-discharge of the nickel electrode. About 70% of the recombination occurred simultaneously with oxygen evolution during charging and the remaining oxygen recombined with hydrogen during the 1(st) hour after charging. Self-discharge of the cell varies linearly with hydrogen pressure at a given state of charge and increased with increasing battery charge levels. The coulometric efficiency calculated based on analysis of the pressure-time data agreed well with the efficiency calculated based on the current-time data. Pressure variations in the battery are simulated accurately to predict coulometric efficiency and the state of charge of the cell, factors of extreme importance for a battery intended for implantation within the human body.

Relationship between climatic variables and the variation in bulk tank milk composition using canonical correlation analysis.

Science.gov (United States)

Stürmer, Morgana; Busanello, Marcos; Velho, João Pedro; Heck, Vanessa Isabel; Haygert-Velho, Ione Maria Pereira

2018-06-04

A number of studies have addressed the relations between climatic variables and milk composition, but these works used univariate statistical approaches. In our study, we used a multivariate approach (canonical correlation) to study the impact of climatic variables on milk composition, price, and monthly milk production at a dairy farm using bulk tank milk data. Data on milk composition, price, and monthly milk production were obtained from a dairy company that purchased the milk from the farm, while climatic variable data were obtained from the National Institute of Meteorology (INMET). The data are from January 2014 to December 2016. Univariate correlation analysis and canonical correlation analysis were performed. Few correlations between the climatic variables and milk composition were found using a univariate approach. However, using canonical correlation analysis, we found a strong and significant correlation (r c  = 0.95, p value = 0.0029). Lactose, ambient temperature measures (mean, minimum, and maximum), and temperature-humidity index (THI) were found to be the most important variables for the canonical correlation. Our study indicated that 10.2% of the variation in milk composition, pricing, and monthly milk production can be explained by climatic variables. Ambient temperature variables, together with THI, seem to have the most influence on variation in milk composition.

Fracture mechanisms in lead zirconate titanate ceramics

International Nuclear Information System (INIS)

Freiman, S.W.; Chuck, L.; Mecholsky, J.J.; Shelleman, D.L.

1986-01-01

Lead Zirconate Titanate (PZT) ceramics can be formed over a wide range of PbTiO 3 /PbZrO 3 ratios and exist in a number of crystal structures. This study involved the use of various fracture mechanics techniques to determine critical fracture toughness, K /SUB IC/ , as a function of composition, microstructure, temperature, and electrical and thermal history. The results of these experiments indicate that variations in K /SUB IC/ are related to phase transformations in the material as well as to other toughening mechanisms such as twinning and microcracking. In addition, the strength and fracture toughness of selected PZT ceramics were determined using specimens in which a crack was introduced by a Vicker's hardness indentor. The variation of K /SUB IC/ with composition and microstructure was related to the extent of twin-crack interaction. Comparison of the plot of strength as a function of indentation load with that predicted from indentation fracture models indicates the presence of internal stresses which contribute to failure. The magnitude of these internal stresses has been correlated with electrical properties of the ceramic. Fractographic analysis was used to determine the magnitude of internal stresses in specimens failing from ''natural flaws.''

Determination of the variation of mercury isotope concentration based on spectral-phase effects

International Nuclear Information System (INIS)

Ganeev, A.A.; Man', D.D.; Turkin, Yu.I.

1988-01-01

A method of isotopic atomic-absorption analysis, based on spectral-phase effects in which there is no need to use several sources of radiation with pure isotopes of the analyte element, was developed. The method made it possible to simplify the analysis and to determine the variation of the concentration of mercury isotopes from one deposit to another with an accuracy several times higher that of traditional methods of spectral isotopic analysis. The method was tested on mercury 198 and mercury 202. The isotopic analyzer is diagramed and described. The mechanism of spectral-phase effects was determined by the difference in effective photon lifetimes, corresponding to different components of the hyperfine structure of the resonance line of mercury at 254 nm

Thermal mechanical analysis of applications with internal heat generation

Science.gov (United States)

Govindarajan, Srisharan Garg

control blade, spatial variations in temperature within the control blade occur from the non-uniform heat generation within the BORAL as a result of the non-uniform thermal neutron flux along the longitudinal direction when the control blade is partially withdrawn. There is also variation in the heating profile through the thickness and about the circumferential width of the control blade. Mathematical curve-fits are generated for the non-uniform volumetric heat generation profile caused by the thermal neutron absorption and the functions are applied as heating conditions within a finite element model of the control blade built using the commercial finite element code Abaqus FEA. The finite element model is solved as a fully coupled thermal mechanical problem as in the case of the annular target. The resulting deflection is compared with the channel gap to determine if there is a significant risk of the control blade binding during reactor operation. Hence, this dissertation will consist of two sections. The first section will seek to present the thermal and structural safety analyses of the annular targets for the production of molybdenum-99. Since there hasn't been any detailed, documented, study on these annular targets in the past, the work complied in this dissertation will help to understand the thermal-mechanical behavior and failure margins of the target during in-vessel irradiation. As the work presented in this dissertation provides a general performance analysis envelope for the annular target, the tools developed in the process can also be used as useful references for future analyses that are specific to any reactor. The numerical analysis approach adopted and the analytical models developed, can also be applied to other applications, outside the Mo-99 project domain, where internal heat generation exists such as in electronic components and nuclear reactor control blades. The second section will focus on estimating the thermally induced deflection and hence

Mobility and Position Error Analysis of a Complex Planar Mechanism with Redundant Constraints

Science.gov (United States)

Sun, Qipeng; Li, Gangyan

2018-03-01

Nowadays mechanisms with redundant constraints have been created and attracted much attention for their merits. The mechanism of the redundant constraints in a mechanical system is analyzed in this paper. A analysis method of Planar Linkage with a repetitive structure is proposed to get the number and type of constraints. According to the difference of applications and constraint characteristics, the redundant constraints are divided into the theoretical planar redundant constraints and the space-planar redundant constraints. And the calculation formula for the number of redundant constraints and type of judging method are carried out. And a complex mechanism with redundant constraints is analyzed of the influence about redundant constraints on mechanical performance. With the combination of theoretical derivation and simulation research, a mechanism analysis method is put forward about the position error of complex mechanism with redundant constraints. It points out the direction on how to eliminate or reduce the influence of redundant constraints.

Analysis of a Hybrid Mechanical Regenerative Braking System

Directory of Open Access Journals (Sweden)

Toh Xiang Wen Matthew

2018-01-01

Full Text Available Regenerative braking systems for conventional vehicles are gaining attention as fossil fuels continue to be depleted. The major forms of regenerative braking systems include electrical and mechanical systems, with the former being more widely adopted at present. However mechanical systems are still feasible, including the possible hybrid systems of two mechanical energy recovery systems. A literature study was made to compare the various mechanical energy recovery systems. These systems were compared based on their advantages and disadvantages with regards to energy storage, usage, and maintenance. Based on the comparison, the most promising concept appeared to be one that combined the flywheel and the pneumatic energy recovery systems. A CAD model of this hybrid system was produced to better visualise the design. This was followed by analytical modelling of the energy recovery systems. The analysis indicated that the angular velocity had an extremely significant impact on the power loss and energy efficiency. The results showed that the hybrid system can provide better efficiency but only when operating within certain parameters. Future work is required to further improve the efficiency of this hybrid system.

Mechanics Evolution Characteristics Analysis of Pressure-arch in Fully-mechanized Mining Field

Directory of Open Access Journals (Sweden)

S.R. Wang

2014-09-01

Full Text Available Based on a practical engineering, the three-dimension computational model was built using FLAC3D under the fullymechanized mining condition. Considering four variation factors, such as the distance of mining advancing, the strength of the surrounding rock, the speed of mining advancing and the dip angle of the coal seam, the mechanics evolution characteristics of the pressure-arch were analyzed. The result showed that for the horizontal seam, the geometric shape of the pressure-arch varied from flat arch to round arch gradually and the height and thickness of the pressure-arch also increased; the maximum principal stress in the skewback also increased with the working face advancing. With the strength of the surrounding rock from soft to hard, the arch thickness reduced, and the arch loading decreased. To improve the mining speed can do some contributions to the stability of the pressure-arch in the mining field. With the increase of dip angle of the seam, the pressure-arch displayed an asymmetric shape, the vault was tilted and moved to the upward direction. At the same time, the thickness of the pressure-arch increased, and the stress concentration in the skewback tended to be further intensified.

Numerical Analysis of Forth-Order Boundary Value Problems in Fluid Mechanics and Mathematics

DEFF Research Database (Denmark)

Hosseinzadeh, E.; Barari, Amin; Fouladi, F.

2011-01-01

In this paper He's variational iteration method is used to solve some examples of linear and non-linear forth-order boundary value problems. The first problem compared with homotopy analysis method solution and the other ones with the exact solution. The results show the high accuracy and speed o...

Numerical analysis of fourth-order boundary value problems in fluid mechanics and mathematics

DEFF Research Database (Denmark)

Hosseinzadeh, Elham; Barari, Amin; Fouladi, Fama

2010-01-01

In this paper He's variational iteration method is used to solve some examples of linear and non-linear forth-order boundary value problems. The first problem compared with homotopy analysis method solution and the other ones with the exact solution. The results show the high accuracy and speed o...

Mechanical modeling for magnetorheological elastomer isolators based on constitutive equations and electromagnetic analysis

Science.gov (United States)

Wang, Qi; Dong, Xufeng; Li, Luyu; Ou, Jinping

2018-06-01

As constitutive models are too complicated and existing mechanical models lack universality, these models are beyond satisfaction for magnetorheological elastomer (MRE) devices. In this article, a novel universal method is proposed to build concise mechanical models. Constitutive model and electromagnetic analysis were applied in this method to ensure universality, while a series of derivations and simplifications were carried out to obtain a concise formulation. To illustrate the proposed modeling method, a conical MRE isolator was introduced. Its basic mechanical equations were built based on equilibrium, deformation compatibility, constitutive equations and electromagnetic analysis. An iteration model and a highly efficient differential equation editor based model were then derived to solve the basic mechanical equations. The final simplified mechanical equations were obtained by re-fitting the simulations with a novel optimal algorithm. In the end, verification test of the isolator has proved the accuracy of the derived mechanical model and the modeling method.

Meiosis and ISSR analysis on genetic variation of 60Co γ-rays irradiated variants of cut chrysanthemum

International Nuclear Information System (INIS)

Xing Lili; Chen Fadi; Miao Hengbin

2009-01-01

Cytology and ISSR technology were used to analyze genetic variations of 60 Co γ-rays induced variants of cut chrysanthemum 'Changzi', for further exploring the mechanism of irradiation and providing theoretical basis for breeding of chrysanthemum. The results showed that, meiotic abnormality ratio of lagging chromosome and chromosome bridge in variants were significantly higher than those in the control at anaphase I and II. The abnormality ratio was also raised with irradiation doses increasing. The highest ratio of two abnormal phenomena at anaphase I was 9.0%, 11.3%, and at anaphase II 15.5%, 8.6%, respectively. Polymorphic bands of 112 were amplified by 21 ISSR primers and the polymorphism rate was 71.3%, which proved that DNA changed in different degrees. These variants were divided into 5 groups by UPGMA based on Jaccard coefficient. It was observed that the clustering result related to their characters of flower shape and color variations. (authors)

Fracture Mechanics

International Nuclear Information System (INIS)

Jang, Dong Il; Jeong, Gyeong Seop; Han, Min Gu

1992-08-01

This book introduces basic theory and analytical solution of fracture mechanics, linear fracture mechanics, non-linear fracture mechanics, dynamic fracture mechanics, environmental fracture and fatigue fracture, application on design fracture mechanics, application on analysis of structural safety, engineering approach method on fracture mechanics, stochastic fracture mechanics, numerical analysis code and fracture toughness test and fracture toughness data. It gives descriptions of fracture mechanics to theory and analysis from application of engineering.

Mechanical design, analysis and testing of a large-range compliant microgripper

Directory of Open Access Journals (Sweden)

Y. Liu

2016-04-01

Full Text Available This paper presents the mechanical design, analysis, fabrication, and testing procedures of a new large-range microgripper which is based on a flexible hinge structure. The uniqueness of the gripper is that the gripper arms not only provide large gripping range but also deliver approximately rectilinear movement as the displacement in nonworking direction is extremely small. The large gripping range is enabled by a mechanism design based on dual-stage flexure amplifier to magnify the stroke of piezoelectric actuator. The first-stage amplifier is a modified version of the Scott Russell (SR mechanism and the second-stage amplifier contains a parallel mechanism. The displacement amplification ratio of the modified SR mechanism in the gripper has been enlarged to 3.56 times of the conventional design. Analytical static models of the gripper mechanism are developed and validated through finite-element analysis (FEA simulation. Results show that the gripping range is over 720 µm with a resonant frequency of 70.7 Hz and negligible displacement in nonworking direction. The total amplification ratio of the input displacement is 16.13. Moreover, a prototype of the gripper is developed by using aluminium 7075 for experimental testing. Experimental results validate the analytical model and FEA simulation results. The proposed microgripper can be employed in various microassembly applications such as pick-and-place of optical fibre.

Short-time variations of the solar neutrino luminosity (Fourier analysis of the argon-37 production rate data)

International Nuclear Information System (INIS)

Haubold, H.J.; Gerth, E.

1985-01-01

We continue the Fourier analysis of the argon-37 production rate for runs 18--80 observed in Davis' well known solar neutrino experiment. The method of Fourier analysis with the unequally-spaced data of Davis and associates is described and the discovered periods we compare with our recently published results for the analysis of runs 18--69 (Haubold and Gerth, 1983). The harmonic analysis of the data of runs 18--80 shows time variations of the solar neutrino flux with periods π = 8.33; 5.26; 2.13; 1.56; 0.83; 0.64; 0.54; and 0.50 years, respectively, which confirms our earlier computations

"Life history space": a multivariate analysis of life history variation in extant and extinct Malagasy lemurs.

Science.gov (United States)

Catlett, Kierstin K; Schwartz, Gary T; Godfrey, Laurie R; Jungers, William L

2010-07-01

Studies of primate life history variation are constrained by the fact that all large-bodied extant primates are haplorhines. However, large-bodied strepsirrhines recently existed. If we can extract life history information from their skeletons, these species can contribute to our understanding of primate life history variation. This is particularly important in light of new critiques of the classic "fast-slow continuum" as a descriptor of variation in life history profiles across mammals in general. We use established dental histological methods to estimate gestation length and age at weaning for five extinct lemur species. On the basis of these estimates, we reconstruct minimum interbirth intervals and maximum reproductive rates. We utilize principal components analysis to create a multivariate "life history space" that captures the relationships among reproductive parameters and brain and body size in extinct and extant lemurs. Our data show that, whereas large-bodied extinct lemurs can be described as "slow" in some fashion, they also varied greatly in their life history profiles. Those with relatively large brains also weaned their offspring late and had long interbirth intervals. These were not the largest of extinct lemurs. Thus, we distinguish size-related life history variation from variation that linked more strongly to ecological factors. Because all lemur species larger than 10 kg, regardless of life history profile, succumbed to extinction after humans arrived in Madagascar, we argue that large body size increased the probability of extinction independently of reproductive rate. We also provide some evidence that, among lemurs, brain size predicts reproductive rate better than body size. (c) 2010 Wiley-Liss, Inc.

A cross-sectional analysis of variation in charges and prices across California for percutaneous coronary intervention.

Directory of Open Access Journals (Sweden)

Renee Y Hsia

Full Text Available Though past studies have shown wide variation in aggregate hospital price indices and specific procedures, few have documented or explained such variation for distinct and common episodes of care.We sought to examine the variability in charges for percutaneous coronary intervention (PCI with a drug-eluting stent and without major complications (MS-DRG-247, and determine whether hospital and market characteristics influenced these charges.We conducted a cross-sectional analysis of adults admitted to California hospitals in 2011 for MS-DRG-247 using patient discharge data from the California Office of Statewide Health Planning and Development. We used a two-part linear regression model to first estimate hospital-specific charges adjusted for patient characteristics, and then examine whether the between-hospital variation in those estimated charges was explained by hospital and market characteristics.Adjusted charges for the average California patient admitted for uncomplicated PCI ranged from $22,047 to $165,386 (median: $88,350 depending on which hospital the patient visited. Hospitals in areas with the highest cost of living, those in rural areas, and those with more Medicare patients had higher charges, while government-owned hospitals charged less. Overall, our model explained 43% of the variation in adjusted charges. Estimated discounted prices paid by private insurers ranged from $3,421 to $80,903 (median: $28,571.Charges and estimated discounted prices vary widely between hospitals for the average California patient undergoing PCI without major complications, a common and relatively homogeneous episode of care. Though observable hospital characteristics account for some of this variation, the majority remains unexplained.

Clinical analysis on 159 cases of mechanical ocular trauma

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Zi-Yao Liu

2013-08-01

Full Text Available AIM: To provide the basis of security guidance and decreasing the incidence through a general investigation of the mechanical ocular trauma among all the common causes, occasions where getting hurt as well as the characteristics of the high-risk group, and by further analysis and monitoring of the clinical cases and follow-up visit, study the related key factors of influencing the prognosis statistically. METHODS: The data of the 159 cases with mechanical ocular trauma were recorded.RESULTS: We obtained the 159 subjects' ages, genders as well as mechanical ocular trauma characteristic data, such as ocular distributions, the seasons of the injuries occurring, the causes and the occasions of the injuries, the high-risks group and so on. The factors affecting the visual prognosis,univariate analysis showed that the difference between urban and rural areas was a related influencing factor while the consulting hours and the ages of the patients were irrelevant. In the multivariate Logistic regression model of complications that affected the visual prognosis, there were four main factors leading to poor eyesight: endophthalmitis, retinal detachment, luxation or subluxation of the lens, prolapse of vitreous. In the multivariate Logistic regression model of the visual prognosis of mechanical eye injury, there were three factors of concern that corresponded to poor eyesight: the ages less than 10, zonation Ⅲ, grade of injury more than 3. CONCLUSION: The epidemiologic features of the mechanical ocular trauma in our hospital correspond to the reports from other areas. Appropriate medical care can improve the visual prognosis. Factors such as zonation Ⅲ, ages less than 10, grade of injury more than 3, endophthalmitis with the eye injury, prolapse of vitreous, luxation or subluxation of the lens and so on, indicate poor visual prognosis.

Temporal correlation in the Goldberg variations

OpenAIRE

Chestopal, Victor

2010-01-01

An interpreter of the Goldberg Variations is almost completely deprived of such utterly important guidance as the composer's tempo markings, which are as rare in the Goldberg Variations as they are in the other works of Bach. The final goal of my study is to suggest a logical foundation, upon which an interpreter of the Goldberg Variations can make his/her choice of tempi. Upon the analysis of opus's structure, which reveals an impressive panorama of symmetries, I suggest a multilevel system ...

A variational method in out-of-equilibrium physical systems.

Science.gov (United States)

Pinheiro, Mario J

2013-12-09

We propose a new variational principle for out-of-equilibrium dynamic systems that are fundamentally based on the method of Lagrange multipliers applied to the total entropy of an ensemble of particles. However, we use the fundamental equation of thermodynamics on differential forms, considering U and S as 0-forms. We obtain a set of two first order differential equations that reveal the same formal symplectic structure shared by classical mechanics, fluid mechanics and thermodynamics. From this approach, a topological torsion current emerges of the form , where Aj and ωk denote the components of the vector potential (gravitational and/or electromagnetic) and where ω denotes the angular velocity of the accelerated frame. We derive a special form of the Umov-Poynting theorem for rotating gravito-electromagnetic systems. The variational method is then applied to clarify the working mechanism of particular devices.

Overlapping constraint for variational surface reconstruction

DEFF Research Database (Denmark)

Aanæs, Henrik; Solem, J.E.

2005-01-01

In this paper a counter example, illustrating a shortcoming in most variational formulations for 3D surface estimation, is presented. The nature of this shortcoming is a lack of an overlapping constraint. A remedy for this shortcoming is presented in the form of a penalty function with an analysi...... of the effects of this function on surface motion. For practical purposes, this will only have minor influence on current methods. However, the insight provided in the analysis is likely to influence future developments in the field of variational surface reconstruction....

Religious influences on human capital variations in imperial Russia

Directory of Open Access Journals (Sweden)

Tomila Lankina

2012-01-01

Full Text Available Historical legacies, particularly imperial tutelage and religion, have featured prominently in recent scholarship on political regime variations in post-communist settings, challenging earlier temporally proximate explanations. The overlap between tutelage, geography, and religion has complicated the uncovering of the spatially uneven effects of the various legacies. The author addresses this challenge by conducting sub-national analysis of religious influences within one imperial domain, Russia. In particular, the paper traces how European settlement in imperial Russia has had a bearing on human development in the imperial periphery. The causal mechanism that the paper proposes to account for this influence is the Western communities’ impact on literacy, which is in turn linked in the analysis to the Western Christian, particularly Protestant, roots, of settler populations. The author makes this case by constructing an original dataset based on sub-national data from the hitherto underutilised first imperial census of 1897.

Variational Bayesian Learning for Wavelet Independent Component Analysis

Science.gov (United States)

Roussos, E.; Roberts, S.; Daubechies, I.

2005-11-01

In an exploratory approach to data analysis, it is often useful to consider the observations as generated from a set of latent generators or "sources" via a generally unknown mapping. For the noisy overcomplete case, where we have more sources than observations, the problem becomes extremely ill-posed. Solutions to such inverse problems can, in many cases, be achieved by incorporating prior knowledge about the problem, captured in the form of constraints. This setting is a natural candidate for the application of the Bayesian methodology, allowing us to incorporate "soft" constraints in a natural manner. The work described in this paper is mainly driven by problems in functional magnetic resonance imaging of the brain, for the neuro-scientific goal of extracting relevant "maps" from the data. This can be stated as a `blind' source separation problem. Recent experiments in the field of neuroscience show that these maps are sparse, in some appropriate sense. The separation problem can be solved by independent component analysis (ICA), viewed as a technique for seeking sparse components, assuming appropriate distributions for the sources. We derive a hybrid wavelet-ICA model, transforming the signals into a domain where the modeling assumption of sparsity of the coefficients with respect to a dictionary is natural. We follow a graphical modeling formalism, viewing ICA as a probabilistic generative model. We use hierarchical source and mixing models and apply Bayesian inference to the problem. This allows us to perform model selection in order to infer the complexity of the representation, as well as automatic denoising. Since exact inference and learning in such a model is intractable, we follow a variational Bayesian mean-field approach in the conjugate-exponential family of distributions, for efficient unsupervised learning in multi-dimensional settings. The performance of the proposed algorithm is demonstrated on some representative experiments.

Strength analysis and optimization of writing mechanism of steel billet marking machine

Directory of Open Access Journals (Sweden)

Fu Min

2017-01-01

Full Text Available According to steel billet marking theory of plasma arc nicking, the paper designs a dual laser ranging marking machine against online marking of special steel billet and realizes multi-character marking of the end face of hot steel billet. Writing mechanism bases on the rectangular coordinates marking form, Z axis adopts cantilever structure. It completes the overall marking task utilizing the synergy of KK module in X axis, Y axis and Z axis. It makes modal analysis on the writing mechanism model established by Pro/Enginner utilizing ANSYS Workbench at the position of X1Y1Z1, and obtains the first six order modal frequency and analyzes the vibration in the writing process. Moreover, the paper analyzes the static structure of the cantilever of writing mechanism, computes its maximum stress and total deformation. To make the writing mechanism reach the target of light weight, the paper optimizes Z-axis cantilever of writing mechanism. According to the analysis, it is known that the optimized Z-axis cantilever of the writing mechanism still meets the strength and rigidity requirement and total mass declines approximately 30%.

Variation and diversity in Homo erectus: a 3D geometric morphometric analysis of the temporal bone.

Science.gov (United States)

Terhune, Claire E; Kimbel, William H; Lockwood, Charles A

2007-07-01

Although the level of taxonomic diversity within the fossil hominin species Homo erectus (sensu lato) is continually debated, there have been relatively few studies aiming to quantify the morphology of this species. Instead, most researchers have relied on qualitative descriptions or the evaluation of nonmetric characters, which in many cases display continuous variation. Also, only a few studies have used quantitative data to formally test hypotheses regarding the taxonomic composition of the "erectus" hypodigm. Despite these previous analyses, however, and perhaps in part due to these varied approaches for assessing variation within specimens typically referred to H. erectus (sensu lato) and the general lack of rigorous statistical testing of how variation within this taxon is partitioned, there is currently little consensus regarding whether this group is a single species, or whether it should instead be split into separate temporal or geographically delimited taxa. In order to evaluate possible explanations for variation within H. erectus, we tested the general hypothesis that variation within the temporal bone morphology of H. erectus is consistent with that of a single species, using great apes and humans as comparative taxa. Eighteen three-dimensional (3D) landmarks of the temporal bone were digitized on a total of 520 extant and fossil hominid crania. Landmarks were registered by Generalized Procrustes Analysis, and Procrustes distances were calculated for comparisons of individuals within and between the extant taxa. Distances between fossil specimens and between a priori groupings of fossils were then compared to the distances calculated within the extant taxa to assess the variation within the H. erectus sample relative to that of known species, subspecies, and populations. Results of these analyses indicate that shape variation within the entire H. erectus sample is generally higher than extant hominid intraspecific variation, and putative H. ergaster

Variations of microstructure and properties of 690 MPa grade low carbon bainitic steel after tempering

Energy Technology Data Exchange (ETDEWEB)

Feng, Rui [Key Laboratory for Liquid-Solid Structural Evolution and Processing of Materials, Ministry of Education, Shandong University, Jinan Shandong 250061 (China); School of Materials Science and Engineering, Shandong University, Jinan Shandong 250061 (China); Li, Shengli, E-mail: lishengli@sdu.edu.cn [Key Laboratory for Liquid-Solid Structural Evolution and Processing of Materials, Ministry of Education, Shandong University, Jinan Shandong 250061 (China); School of Materials Science and Engineering, Shandong University, Jinan Shandong 250061 (China); Li, Zhenshun; Tian, Lei [Key Laboratory for Liquid-Solid Structural Evolution and Processing of Materials, Ministry of Education, Shandong University, Jinan Shandong 250061 (China); School of Materials Science and Engineering, Shandong University, Jinan Shandong 250061 (China)

2012-12-15

The variations of microstructure, mechanical properties and electrical resistivity of 690 MPa grade low carbon bainitic steel tempered at different temperatures were investigated with Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM) and double-arm Bridge. The results show that the appearance of granular bainite, decomposition of retained austenite, variations of dislocation density and solid solution of microalloying elements are the main reasons for variations of mechanical properties and electrical resistivity. Electrical resistivity reflects the solution content of microalloying elements and variations of dislocation density, which can be used as a fast and effective way to analyze the microstructure of materials.

CRDM motion analysis using machine learning technique

International Nuclear Information System (INIS)

Nishimura, Takuya; Nakayama, Hiroyuki; Saitoh, Mayumi; Yaguchi, Seiji

2017-01-01

Magnetic jack type Control Rod Drive Mechanism (CRDM) for pressurized water reactor (PWR) plant operates control rods in response to electrical signals from a reactor control system. CRDM operability is evaluated by quantifying armature's response of closed/opened time which means interval time between coil energizing/de-energizing points and armature closed/opened points. MHI has already developed an automatic CRDM motion analysis and applied it to actual plants so far. However, CRDM operational data has wide variation depending on their characteristics such as plant condition, plant, etc. In the existing motion analysis, there is an issue of analysis accuracy for applying a single analysis technique to all plant conditions, plants, etc. In this study, MHI investigated motion analysis using machine learning (Random Forests) which is flexibly accommodated to CRDM operational data with wide variation, and is improved analysis accuracy. (author)

Application of Archimedean copulas to the analysis of drought decadal variation in China

Science.gov (United States)

Zuo, Dongdong; Feng, Guolin; Zhang, Zengping; Hou, Wei

2017-12-01

Based on daily precipitation data collected from 1171 stations in China during 1961-2015, the monthly standardized precipitation index was derived and used to extract two major drought characteristics which are drought duration and severity. Next, a bivariate joint model was established based on the marginal distributions of the two variables and Archimedean copula functions. The joint probability and return period were calculated to analyze the drought characteristics and decadal variation. According to the fit analysis, the Gumbel-Hougaard copula provided the best fit to the observed data. Based on four drought duration classifications and four severity classifications, the drought events were divided into 16 drought types according to the different combinations of duration and severity classifications, and the probability and return period were analyzed for different drought types. The results showed that the occurring probability of six common drought types (0 accounted for 76% of the total probability of all types. Moreover, due to their greater variation, two drought types were particularly notable, i.e., the drought types where D ≥ 6 and S ≥ 2. Analyzing the joint probability in different decades indicated that the location of the drought center had a distinctive stage feature, which cycled from north to northeast to southwest during 1961-2015. However, southwest, north, and northeast China had a higher drought risk. In addition, the drought situation in southwest China should be noted because the joint probability values, return period, and the analysis of trends in the drought duration and severity all indicated a considerable risk in recent years.

Variational analysis for simulating free-surface flows in a porous medium

Directory of Open Access Journals (Sweden)

Shabbir Ahmed

2003-01-01

is used to obtain a discrete form of equations for a two-dimensional domain. The matrix characteristics and the stability criteria have been investigated to develop a stable numerical algorithm for solving the governing equation. A computer programme has been written to solve a symmetric positive definite system obtained from the variational finite element analysis. The system of equations is solved using the conjugate gradient method. The solution generates time-varying hydraulic heads in the subsurface. The interfacing free surface between the unsaturated and saturated zones in the variably saturated domain is located, based on the computed hydraulic heads. Example problems are investigated. The finite element solutions are compared with the exact solutions for the example problems. The numerical characteristics of the finite element solution method are also investigated using the example problems.

analysis of spatial-temporal variations and driving force of low cloud in northern China

Science.gov (United States)

Niu, Xiaorui; Wang, Shuyu

2015-04-01

Cloud plays a crucial role in the climate system, and better understanding of its characteristics and formation mechanism are essential to study the climate system, improve the performance of climate models, and to provide scientific basis on conducting weather modification activities and better using water resources for the purpose of improving the local climate and ecological environment. During 1961 to 2005, decrease trend is detected for the total cloud amount over most parts of northern China, while increase trend is found for the low cloud amount with significant regionality. Both station and ISCCP D2 datasets present similar spatial distributions and interdecadal variation of high cloud. However two datasets show different characters for those of low cloud. Three typical sub-regions are chosen considering their underlying surface features and the temporal trend of low cloud amount, over which the interdecadal variations of low cloud amount in three regions are systematically investigated. The analyses show the strong regionality and seasonality in low cloud amount's temporal variations and trend, and quasi-biannual oscillations are observed in low cloud amount in three regions in the past 45 years. The relationships between 500 hPa circulation indexes and low cloud over the three regions are examined by means of singular value decomposition (SVD). The results show that the summer low cloud amount in Xinjiang is closely related with the Subtropical High, the Tibetan Plateau and Polar Vortex, and the autumn low cloud amount in North China is affected by the area of Subtropical High and intensity of Polar Vortex. For northeast China the controlling factor that affects the spring low cloud amount is the area of Polar Vortex in quadrant ⅳ（30°W-60°E）.

Association analysis between spatiotemporal variation of vegetation greenness and precipitation/temperature in the Yangtze River Basin (China).

Science.gov (United States)

Cui, Lifang; Wang, Lunche; Singh, Ramesh P; Lai, Zhongping; Jiang, Liangliang; Yao, Rui

2018-05-23

The variation in vegetation greenness provides good understanding of the sustainable management and monitoring of land surface ecosystems. The present paper discusses the spatial-temporal changes in vegetation and controlling factors in the Yangtze River Basin (YRB) using Global Inventory Modeling and Mapping Studies (GIMMS) Normalized Difference Vegetation Index (NDVI) for the period 2001-2013. Theil-Sen Median trend analysis, Pearson correlation coefficients, and residual analysis have been used, which shows decreasing trend of the annual mean NDVI over the whole YRB. Spatially, the regions with significant decreasing trends were mainly located in parts of central YRB, and pronounced increasing trends were observed in parts of the eastern and western YRB. The mean NDVI during spring and summer seasons increased, while it decreased during autumn and winter seasons. The seasonal mean NDVI shows spatial heterogeneity due to the vegetation types. The correlation analysis shows a positive relation between NDVI and temperature over most of the YRB, whereas NDVI and precipitation show a negative correlation. The residual analysis shows an increase in NDVI in parts of eastern and western YRB and the decrease in NDVI in the small part of Yangtze River Delta (YRD) and the mid-western YRB due to human activities. In general, climate factors were the principal drivers of NDVI variation in YRB in recent years.

Mechanical Analysis Of Limestone In Jaya, Lhong, And Lhoknga

Directory of Open Access Journals (Sweden)

Raihan .

2012-09-01

Full Text Available Research about mechanical analysis of limestone in District Jaya, Lhong, and Lhoknga has been done from Dec. 2011 to Mei 2012. This study aim is to classify the limestones based on physical and mechanical tests as well as identify opportunities limestone utilization in accordance with the SII 0378-80 as a condition of quality natural stone for building. Research have been done by testing compressive strength, modulus Young, wear, specific gravity, porosity, and absorption. The result shows that the limestones are qualified natural stone for building the foundation, curbstone, stone and ornamental stone or paste.

Uncertainty analysis on probabilistic fracture mechanics assessment methodology

International Nuclear Information System (INIS)

Rastogi, Rohit; Vinod, Gopika; Chandra, Vikas; Bhasin, Vivek; Babar, A.K.; Rao, V.V.S.S.; Vaze, K.K.; Kushwaha, H.S.; Venkat-Raj, V.

1999-01-01

Fracture Mechanics has found a profound usage in the area of design of components and assessing fitness for purpose/residual life estimation of an operating component. Since defect size and material properties are statistically distributed, various probabilistic approaches have been employed for the computation of fracture probability. Monte Carlo Simulation is one such procedure towards the analysis of fracture probability. This paper deals with uncertainty analysis using the Monte Carlo Simulation methods. These methods were developed based on the R6 failure assessment procedure, which has been widely used in analysing the integrity of structures. The application of this method is illustrated with a case study. (author)

Stepping movement analysis of control rod drive mechanism

International Nuclear Information System (INIS)

Xu Yantao; Zu Hongbiao

2013-01-01

Background: Control rod drive mechanism (CRDM) is one of the important safety-related equipment for nuclear power plants. Purpose: The operating parameters of stepping movement, including lifting loads, step distance and step velocity, are all critical design targets. Methods: FEA and numerical simulation are used to analyze stepping movement separately. Results: The motion equations of the movable magnet in stepping movement are established by load analysis. Gravitation, magnetic force, fluid resistance and spring force are all in consideration in the load analysis. The operating parameters of stepping movement are given. Conclusions: The results, including time history curves of force, speed and etc, can positively used in the design of CRDM. (authors)

Mechanical properties of granular materials: A variational approach to grain-scale simulations

Energy Technology Data Exchange (ETDEWEB)

Holtzman, R.; Silin, D.B.; Patzek, T.W.

2009-01-15

The mechanical properties of cohesionless granular materials are evaluated from grain-scale simulations. A three-dimensional pack of spherical grains is loaded by incremental displacements of its boundaries. The deformation is described as a sequence of equilibrium configurations. Each configuration is characterized by a minimum of the total potential energy. This minimum is computed using a modification of the conjugate gradient algorithm. Our simulations capture the nonlinear, path-dependent behavior of granular materials observed in experiments. Micromechanical analysis provides valuable insight into phenomena such as hysteresis, strain hardening and stress-induced anisotropy. Estimates of the effective bulk modulus, obtained with no adjustment of material parameters, are in agreement with published experimental data. The model is applied to evaluate the effects of hydrate dissociation in marine sediments. Weakening of the sediment is quantified as a reduction in the effective elastic moduli.

Natural Variation in Resistance to Virus Infection in Dipteran Insects

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William H. Palmer

2018-03-01

Full Text Available The power and ease of Drosophila genetics and the medical relevance of mosquito-transmitted viruses have made dipterans important model organisms in antiviral immunology. Studies of virus–host interactions at the molecular and population levels have illuminated determinants of resistance to virus infection. Here, we review the sources and nature of variation in antiviral immunity and virus susceptibility in model dipteran insects, specifically the fruit fly Drosophila melanogaster and vector mosquitoes of the genera Aedes and Culex. We first discuss antiviral immune mechanisms and describe the virus-specificity of these responses. In the following sections, we review genetic and microbiota-dependent variation in antiviral immunity. In the final sections, we explore less well-studied sources of variation, including abiotic factors, sexual dimorphism, infection history, and endogenous viral elements. We borrow from work on other pathogen types and non-dipteran species when it parallels or complements studies in dipterans. Understanding natural variation in virus–host interactions may lead to the identification of novel restriction factors and immune mechanisms and shed light on the molecular determinants of vector competence.

Green mathematics: Benefits of including biological variation in your data analysis

NARCIS (Netherlands)

Tijskens, L.M.M.; Schouten, R.E.; Unuk, T.; Simcic, M.

2015-01-01

Biological variation is omnipresent in nature. It contains useful information that is neglected by the usually applied statistical procedures. To extract this information special procedures have to be applied. Biological variation is seen in properties (e.g. size, colour, firmness), but the

Failure analysis and seal life prediction for contacting mechanical seals

Science.gov (United States)

Sun, J. J.; He, X. Y.; Wei, L.; Feng, X.

2008-11-01

Fault tree analysis method was applied to quantitatively investigate the causes of the leakage failure of mechanical seals. It is pointed out that the change of the surface topography is the main reasons causing the leakage of mechanical seals under the condition of constant preloads. Based on the fractal geometry theory, the relationship between the surface topography and working time were investigated by experiments, and the effects of unit load acting on seal face on leakage path in a mechanical seal were analyzed. The model of predicting seal life of mechanical seals was established on the basis of the relationship between the surface topography and working time and allowable leakage. The seal life of 108 mechanical seal operating at the system of diesel fuel storage and transportation was predicted and the problem of the condition monitoring for the long-period operation of mechanical seal was discussed by this method. The research results indicate that the method of predicting seal life of mechanical seals is feasible, and also is foundation to make scheduled maintenance time and to achieve safe-reliability and low-cost operation for industrial devices.

Size variation in Middle Pleistocene humans.

Science.gov (United States)

Arsuaga, J L; Carretero, J M; Lorenzo, C; Gracia, A; Martínez, I; Bermúdez de Castro, J M; Carbonell, E

1997-08-22

It has been suggested that European Middle Pleistocene humans, Neandertals, and prehistoric modern humans had a greater sexual dimorphism than modern humans. Analysis of body size variation and cranial capacity variation in the large sample from the Sima de los Huesos site in Spain showed instead that the sexual dimorphism is comparable in Middle Pleistocene and modern populations.

Impaired swallowing mechanics of post radiation therapy head and neck cancer patients: A retrospective videofluoroscopic study.

Science.gov (United States)

Pearson, William G; Davidoff, Alisa A; Smith, Zachary M; Adams, Dorothy E; Langmore, Susan E

2016-02-28

To determine swallowing outcomes and hyolaryngeal mechanics associated with post radiation therapy head and neck cancer (rtHNC) patients using videofluoroscopic swallow studies. In this retrospective cohort study, videofluoroscopic images of rtHNC patients (n = 21) were compared with age and gender matched controls (n = 21). Penetration-aspiration of the bolus and bolus residue were measured as swallowing outcome variables. Timing and displacement measurements of the anterior and posterior muscular slings elevating the hyolaryngeal complex were acquired. Coordinate data of anatomical landmarks mapping the action of the anterior muscles (suprahyoid muscles) and posterior muscles (long pharyngeal muscles) were used to calculate the distance measurements, and slice numbers were used to calculate time intervals. Canonical variate analysis with post-hoc discriminant function analysis was performed on coordinate data to determine multivariate mechanics of swallowing associated with treatment. Pharyngeal constriction ratio (PCR) was also measured to determine if weak pharyngeal constriction is associated with post radiation therapy. The rtHNC group was characterized by poor swallowing outcomes compared to the control group in regards to: Penetration-aspiration scale (P time of displacement was abbreviated (P = 0.002) and distance of excursion was reduced (P = 0.02) in the rtHNC group. A canonical variate analysis shows a significant reduction in pharyngeal mechanics in the rtHNC group (P clearance. Using videofluoroscopy, this study shows rtHNC patients have worse swallowing outcomes associated with reduced hyolaryngeal mechanics and pharyngeal constriction compared with controls.

Positioning accuracy analysis of adjusting target mechanism of three-dimensional attitude

International Nuclear Information System (INIS)

Ma Li; Wang Kun; Sun Linzhi; Zhou Shasha

2012-01-01

A novel adjusting target mechanism of three-dimensional attitude is presented according to the characteristics of the target transport subsystem in inertial confinement fusion (ICF). The mechanism consists of a tangent mechanism adjusting rotation angle and a set of orthogonal tangent mechanism adjusting two-dimensional deflection angles. The structural parameters of the adjusting target mechanism are analyzed according to principle errors, structure errors and motion errors of following. The analysis results indicate that the system error of the adjusting target mechanism is influenced by the displacement of the linear actuators, the actuator ball radius, the working radius of the tangent mechanism, the angle error of the inclined installation hole, the centralization error of the actuators, the orthogonal error of the two tangent mechanism, and the angle errors of the inclined target rod inclined rotation shaft. The errors of the inclined target rod and inclined rotation shaft are the two greatest impact factors, the spherical contact error is the next. By means of precise assembly and control system compensation, the accuracy of the adjusting target mechanism can be less than 0.1 mrad. (authors)