Matter tensor from the Hilbert variational principle

International Nuclear Information System (INIS)

Pandres, D. Jr.

1976-01-01

We consider the Hilbert variational principle which is conventionally used to derive Einstein's equations for the source-free gravitational field. We show that at least one version of the equivalence principle suggests an alternative way of performing the variation, resulting in a different set of Einstein equations with sources automatically present. This illustrates a technique which may be applied to any theory that is derived from a variational principle and that admits a gauge group. The essential point is that, if one first imposes a gauge condition and then performs the variation, one obtains field equations with source terms which do not appear if one first performs the variation and then imposes the gauge condition. A second illustration is provided by the variational principle conventionally used to derive Maxwell's equations for the source-free electromagnetic field. If one first imposes the Lorentz gauge condition and then performs the variation, one obtains Maxwell's equations with sources present

A medium-independent variational macroscopic theory of two-phase porous media – Part I: Derivation of governing equations and stress partitioning laws

OpenAIRE

Serpieri , Roberto; Travascio , Francesco

2016-01-01

A macroscopic continuum theory of two-phase saturated porous media is derived by a purely variational deduction based on the least Action principle. The proposed theory proceeds from the consideration of a minimal set of kinematic descriptors and keeps a specific focus on the derivation of most general medium-independent governing equations, which have a form independent from the particular constitutive relations and thermodynamic constraints characterizing a specific medium. The kinematics o...

No evidence that genetic variation in the myeloid-derived suppressor cell pathway influences ovarian cancer survival

DEFF Research Database (Denmark)

Sucheston-Campbell, Lara E; Cannioto, Rikki; Clay, Alyssa I

2017-01-01

BACKGROUND: The precise mechanism by which the immune system is adversely affected in cancer patients remains poorly understood, but the accumulation of immune suppressive/pro-tumorigenic myeloid-derived suppressor cells (MDSCs) is thought to be one prominent mechanism contributing to immunologic...... tolerance of malignant cells in epithelial ovarian cancer (EOC). To this end, we hypothesized genetic variation in MDSC pathway genes would be associated with survival after EOC diagnoses. METHODS: We measured the hazard of death due to EOC within 10 years of diagnosis, overall and by invasive subtype...

Variational continuum multiphase poroelasticity theory and applications

CERN Document Server

Serpieri, Roberto

2017-01-01

This book collects the theoretical derivation of a recently presented general variational macroscopic continuum theory of multiphase poroelasticity (VMTPM), together with its applications to consolidation and stress partitioning problems of interest in several applicative engineering contexts, such as in geomechanics and biomechanics. The theory is derived based on a purely-variational deduction, rooted in the least-Action principle, by considering a minimal set of kinematic descriptors. The treatment herein considered keeps a specific focus on the derivation of most general medium-independent governing equations. It is shown that VMTPM recovers paradigms of consolidated use in multiphase poroelasticity such as Terzaghi's stress partitioning principle and Biot's equations for wave propagation. In particular, the variational treatment permits the derivation of a general medium-independent stress partitioning law, and the proposed variational theory predicts that the external stress, the fluid pressure, and the...

Dynamics of nonholonomic systems from variational principles embedded variation identity

International Nuclear Information System (INIS)

Guo Yongxin; Liu Shixing; Liu Chang; Chang Peng

2009-01-01

Nondeterminacy of dynamics, i.e., the nonholonomic or the vakonomic, fundamental variational principles, e.g., the Lagrange-d'Alembert or Hamiltonian, and variational operators, etc., of nonholonomic mechanical systems can be attributed to the non-uniqueness of ways how to realize nonholonomic constraints. Making use of a variation identity of nonholonomic constraints embedded into the Hamilton's principle with the method of Lagrange undetermined multipliers, three kinds of dynamics for the nonholonomic systems including the vakonomic and nonholonomic ones and a new one are obtained if the variation is respectively reduced to three conditional variations: vakonomic variation, Hoelder's variation and Suslov's variation, defined by the identity. Therefore, different dynamics of nonholonomic systems can be derived from an integral variational principle, utilizing one way of embedding constraints into the principle, with different variations. It is verified that the similar embedding of the identity into the Lagrange-d'Alembert principle gives rise to the nonholonomic dynamics but fails to give the vakonomic one unless the constraints are integrable.

Dynamics of nonholonomic systems from variational principles embedded variation identity

Energy Technology Data Exchange (ETDEWEB)

Guo Yongxin, E-mail: yxguo@lnu.edu.c [College of Physics, Liaoning University, Shenyang 110036 (China); Liu Shixing [College of Physics, Liaoning University, Shenyang 110036 (China); Liu Chang; Chang Peng [Department of Applied Mechanics, Beijing Institute of Technology, Beijing 100081 (China)

2009-10-19

Nondeterminacy of dynamics, i.e., the nonholonomic or the vakonomic, fundamental variational principles, e.g., the Lagrange-d'Alembert or Hamiltonian, and variational operators, etc., of nonholonomic mechanical systems can be attributed to the non-uniqueness of ways how to realize nonholonomic constraints. Making use of a variation identity of nonholonomic constraints embedded into the Hamilton's principle with the method of Lagrange undetermined multipliers, three kinds of dynamics for the nonholonomic systems including the vakonomic and nonholonomic ones and a new one are obtained if the variation is respectively reduced to three conditional variations: vakonomic variation, Hoelder's variation and Suslov's variation, defined by the identity. Therefore, different dynamics of nonholonomic systems can be derived from an integral variational principle, utilizing one way of embedding constraints into the principle, with different variations. It is verified that the similar embedding of the identity into the Lagrange-d'Alembert principle gives rise to the nonholonomic dynamics but fails to give the vakonomic one unless the constraints are integrable.

Intra- and interspecific variation in tropical tree and liana phenology derived from Unmanned Aerial Vehicle images

Science.gov (United States)

Bohlman, S.; Park, J.; Muller-Landau, H. C.; Rifai, S. W.; Dandois, J. P.

2017-12-01

Phenology is a critical driver of ecosystem processes. There is strong evidence that phenology is shifting in temperate ecosystems in response to climate change, but tropical tree and liana phenology remains poorly quantified and understood. A key challenge is that tropical forests contain hundreds of plant species with a wide variety of phenological patterns. Satellite-based observations, an important source of phenology data in northern latitudes, are hindered by frequent cloud cover in the tropics. To quantify phenology over a large number of individuals and species, we collected bi-weekly images from unmanned aerial vehicles (UAVs) in the well-studied 50-ha forest inventory plot on Barro Colorado Island, Panama. Between October 2014 and December 2015 and again in May 2015, we collected a total of 35 sets of UAV images, each with continuous coverage of the 50-ha plot, where every tree ≥ 1 cm DBH is mapped. Spectral, texture, and image information was extracted from the UAV images for individual tree crowns, which was then used as inputs for a machine learning algorithm to predict percent leaf and branch cover. We obtained the species identities of 2000 crowns in the images via field mapping. The objectives of this study are to (1) determined if machine learning algorithms, applied to UAV images, can effectively quantify changes in leaf cover, which we term "deciduousness; (2) determine how liana cover effects deciduousness and (3) test how well UAV-derived deciduousness patterns match satellite-derived temporal patterns. Machine learning algorithms trained on a variety of image parameters could effectively determine leaf cover, despite variation in lighting and viewing angles. Crowns with higher liana cover have less overall deciduousness (tree + liana together) than crowns with lower liana cover. Individual crown deciduousness, summed over all crowns measured in the 50-ha plot, showed a similar seasonal pattern as MODIS EVI composited over 10 years. However

Variational principle for nonlinear gyrokinetic Vlasov--Maxwell equations

International Nuclear Information System (INIS)

Brizard, Alain J.

2000-01-01

A new variational principle for the nonlinear gyrokinetic Vlasov--Maxwell equations is presented. This Eulerian variational principle uses constrained variations for the gyrocenter Vlasov distribution in eight-dimensional extended phase space and turns out to be simpler than the Lagrangian variational principle recently presented by H. Sugama [Phys. Plasmas 7, 466 (2000)]. A local energy conservation law is then derived explicitly by the Noether method. In future work, this new variational principle will be used to derive self-consistent, nonlinear, low-frequency Vlasov--Maxwell bounce-gyrokinetic equations, in which the fast gyromotion and bounce-motion time scales have been eliminated

Seasonal Variations of the Earth's Gravitational Field: An Analysis of Atmospheric Pressure, Ocean Tidal, and Surface Water Excitation

Science.gov (United States)

Dong, D,; Gross, R.S.; Dickey, J.

1996-01-01

Monthly mean gravitational field parameters (denoted here as C(sub even)) that represent linear combinations of the primarily even degree zonal spherical harmonic coefficients of the Earth's gravitational field have been recovered using LAGEOS I data and are compared with those derived from gridded global surface pressure data of the National meteorological center (NMC) spanning 1983-1992. The effect of equilibrium ocean tides and surface water variations are also considered. Atmospheric pressure and surface water fluctuations are shown to be the dominant cause of observed annual C(sub even) variations. Closure with observations is seen at the 1sigma level when atmospheric pressure, ocean tide and surface water effects are include. Equilibrium ocean tides are shown to be the main source of excitation at the semiannual period with closure at the 1sigma level seen when both atmospheric pressure and ocean tide effects are included. The inverted barometer (IB) case is shown to give the best agreement with the observation series. The potential of the observed C(sub even) variations for monitoring mass variations in the polar regions of the Earth and the effect of the land-ocean mask in the IB calculation are discussed.

Variation in the leaf sodium content of the Hordeum vulgare (barley) cultivar Maythorpe and its derived mutant cv. Golden Promise

International Nuclear Information System (INIS)

Forster, B.P.; Pakniyat, H.; Macaulay, M.; Matheson, W.; Phillips, M.S.; Thomas, W.T.B.; Powell, W.

1994-01-01

Tests for shoot and root sodium content were carried out on various barley cultivars (Hordeum vulgare) and experimental lines including wild barley (H. spontaneum) and derivatives. Lines were grown in hydroculture with and without the addition of salt (NaCl), and sodium concentrations in shoots and roots were determined. Variation in shoot sodium content was found between the various lines; in contrast, no significant differences were found between the lines tested for root sodium content. The most significant finding was the variation in shoot sodium content between the two cultivars Golden Promise and Maythorpe. Golden Promise is a direct gamma-ray induced mutant of the cultivar Maythorpe and the reduced shoot sodium content of Golden Promise can be attributed to radiation treatment. (author)

An ecological study of regional variation in work injuries among young workers

Directory of Open Access Journals (Sweden)

Smith Peter

2007-05-01

Full Text Available Abstract Background The investigation of geographic variation in occupational injuries has received little attention. Young workers 15 to 24 years are of particular concern because they consistently show elevated occupational injury rates compared to older workers. The present study sought to: (a to describe the geographic variation of work injuries; (b to determine whether geographic variation remained after controlling for relevant demographic and job characteristics; (c to identify the region-level factors that correlate with the geographic variation. Methods Using workers compensation claims and census data, we estimated claim rates per 100 full-time equivalents for 15 to 24 year olds in 46 regions in Ontario. A total of 21 region-level indicators were derived primarily from Census and Labour Force Survey data to reflect social and material deprivation of the region as well as demographic and employment characteristics of youth living in those areas. Results Descriptive findings showed substantial geographic variation in young worker injury rates, even after controlling for several job and demographic variables. Region-level characteristics such as greater residential stability were associated with low work injury rates. Also, regions with the lowest claim rates tended to have proportionally fewer cuts and burns than high-claim-rate regions. Conclusion The finding of substantial geographic variation in youth claim rates even after controlling for demographic and job factors can aid in targeting prevention resource. The association between region-level indicators such as residential stability and youth work injury suggests that work injury prevention strategies can be integrated with other local economic development measures. The findings partially support the notion that work safety measures may be unevenly distributed with respect to regional socio-economic factors.

MODIS derived fire characteristics and aerosol optical depth variations during the agricultural residue burning season, north India

International Nuclear Information System (INIS)

Vadrevu, Krishna Prasad; Ellicott, Evan; Badarinath, K.V.S.; Vermote, Eric

2011-01-01

Agricultural residue burning is one of the major causes of greenhouse gas emissions and aerosols in the Indo-Ganges region. In this study, we characterize the fire intensity, seasonality, variability, fire radiative energy (FRE) and aerosol optical depth (AOD) variations during the agricultural residue burning season using MODIS data. Fire counts exhibited significant bi-modal activity, with peak occurrences during April-May and October-November corresponding to wheat and rice residue burning episodes. The FRE variations coincided with the amount of residues burnt. The mean AOD (2003-2008) was 0.60 with 0.87 (+1σ) and 0.32 (-1σ). The increased AOD during the winter coincided well with the fire counts during rice residue burning season. In contrast, the AOD-fire signal was weak during the summer wheat residue burning and attributed to dust and fossil fuel combustion. Our results highlight the need for 'full accounting of GHG's and aerosols', for addressing the air quality in the study area. - Highlights: → MODIS data could capture rice and wheat residue burning events. → The total FRP was high during the rice burning season than the wheat. → MODIS AOD variations coincided well with rice burning events than wheat. → AOD values exceeding one suggested intense air pollution. - This research work highlights the satellite derived fire products and their potential in characterizing the agricultural residue burning events and air pollution.

Variational approach to nuclear fluid dynamics

International Nuclear Information System (INIS)

Da Providencia, J.P.; Holzwarth, G.

1983-01-01

A variational derivation of a fluid-dynamical formalism for finite Fermi systems is presented which is based on a single determinant as variational function and does not exclude the possibility of transverse flow. Therefore the explicit specification of the time-odd part has to go beyond the local chi-approximation, while the time-even part is taken in the generalized scaling form. The necessary boundary conditions are derived from the variation of the lagrangian. The results confirm previous simplified approaches to a remarkable degree for quadrupole modes; for other multipolarities the deviations are much less than might be expected according to a sizeable change in the transverse sound speed. (orig.)

Variational functionals which admit discontinuous trial functions

International Nuclear Information System (INIS)

Nelson, P. Jr.

1975-01-01

It is argued that variational synthesis with discontinuous trial functions requires variational principles applicable to equations involving operators acting between distinct Hilbert spaces. A description is given of a Roussopoulos-type variational principle generalized to cover this situation. This principle is suggested as the basis for a unified approach to the derivation of variational functionals. In addition to esthetics, this approach has the advantage that the mathematical details increase the understanding of the derived functional, particularly the sense in which a synthesized solution should be regarded as an approximation to the true solution. By way of illustration, the generalized Roussopoulos principle is applied to derive a class of first-order diffusion functionals which admit trial functions containing approximations at an interface. These ''asymptotic'' interface quantities are independent of the limiting approximations from either side and permit use of different trial spectra at and on either side of an interface. The class of functionals derived contains as special cases both the Lagrange multiplier method of Buslik and two functionals of Lambropoulos and Luco. Some numerical results for a simple two-group model confirm that the ''multipliers'' can closely approximate the appropriate quantity in the region near an interface. (U.S.)

Diurnal Variation of Plasma Brain-Derived Neurotrophic Factor Levels in Women with Functional Hypothalamic Amenorrhea.

Science.gov (United States)

Drakopoulos, Panagiotis; Casarosa, Elena; Bucci, Fiorella; Piccinino, Manuela; Wenger, Jean-Marie; Nappi, Rossella Elena; Polyzos, Nicholas; Genazzani, Andrea Riccardo; Pluchino, Nicola

2015-01-01

Brain-derived neurotrophic factor (BDNF) is strongly related to hormonal networks and is modulated by hypothalamic activity. To evaluate plasma BDNF concentration in patients with functional hypothalamic amenorrhea (FHA), with reference to the BDNF circadian rhythm and its relation with the cortisol (F) rhythm, and to assess whether the duration of amenorrhea might influence the BDNF:F ratio in FHA. This was an observational study evaluating 36 amenorrheic and 30 eumenorrheic women. Basal values of BDNF and hormones were examined in blood samples collected from 7:00 to 9:00 h in all the women. Basal BDNF and F levels were determined in blood samples collected in 12 subjects from each group at 8:00, 12:00, 16:00, 20:00, and 24:00 h. BDNF plasma levels are significantly lower in amenorrheic women (p 0.05), sex steroids, and F in FHA. Low plasma BDNF levels in FHA are not significantly correlated with duration of amenorrhea. The 24-hour variation of BDNF in amenorrheic women is significantly lower when compared to the control group, and normal daily variations of BDNF disappeared in FHA patients. F preserved its circadian rhythm in both groups. Interactions between BDNF, the hypothalamus-pituitary-adrenal axis, and sex steroids might be critical in clinical conditions of modified homeostasis/adaptation, such as FHA. © 2015 S. Karger AG, Basel.

Linking numbers and variational method

International Nuclear Information System (INIS)

Oda, I.; Yahikozawa, S.

1989-09-01

The ordinary and generalized linking numbers for two surfaces of dimension p and n-p-1 in an n dimensional manifold are derived. We use a variational method based on the properties of topological quantum field theory in order to derive them. (author). 13 refs, 2 figs

Black sea annual and inter-annual water mass variations from space

DEFF Research Database (Denmark)

Yildiz, H.; Andersen, Ole Baltazar; Simav, M.

2011-01-01

influenced by the leakage of hydrological signals from the surrounding land. After applying the corresponding correction, we found a good agreement with water mass variations derived from steric-corrected satellite altimetry observations. Both GRACE and altimetry show significant annual water mass variations......This study evaluates the performance of two widely used GRACE solutions (CNES/GRGS RL02 and CSR RL04) in deriving annual and inter-annual water mass variations in the Black Sea for the period 2003–2007. It is demonstrated that the GRACE derived water mass variations in the Black Sea are heavily...

Variation principle for nonlinear wave propagation

International Nuclear Information System (INIS)

Watanabe, T.; Lee, Y.C.; Nishikawa, Kyoji; Hojo, H.; Yoshida, Y.

1976-01-01

Variation principle is derived which determines stationary nonlinear propagation of electrostatic waves in the self-consistent density profile. Example is given for lower-hybrid waves and the relation to the variation principle for the Lagrangian density of electromagnetic fluids is discussed

Variational principles for the projected breakup amplitude

International Nuclear Information System (INIS)

Hahn, Y.

1976-01-01

Two alternate forms of variational principles for the breakup amplitude describing the two- to three-cluster transition are derived such that all the integrals involved in the intermediate stages are well defined. The first form contains a trial Green's function with which both the initial and final state trial wave functions are constructed. The earlier form of the Kohn-type variational principle derived by Lieber, Rosenberg, and Spruch is recovered, however, when this connection between the trial functions is removed. The second form of the variational principle is derived by projecting out from the trial functions all the open channel components which correspond to the two-cluster structures including the rearrangement channels. The remaining part of the wave functions describes the channels with three-cluster structures, and the integrals involving this part are then mathematically well defined

29 CFR 780.607 - “Primarily employed” in agriculture.

Science.gov (United States)

2010-07-01

... 29 Labor 3 2010-07-01 2010-07-01 false âPrimarily employedâ in agriculture. 780.607 Section 780... AGRICULTURE, PROCESSING OF AGRICULTURAL COMMODITIES, AND RELATED SUBJECTS UNDER THE FAIR LABOR STANDARDS ACT Employment in Agriculture and Livestock Auction Operations Under the Section 13(b)(13) Exemption Requirements...

(Ln-bar, g)-spaces. Variation operator

International Nuclear Information System (INIS)

Manoff, S.; Dimitrov, B.

1998-01-01

A variation operator is determined over (L n bar, g)-spaces as a linear differential operator, acting on tensor fields in a given basis. Its commutation relations with the Lie differential operator, with the covariant differential operator and with the contraction operator are imposed. The corollaries from using the different commutation relations in a Lagrangian formalism are found and two types of variation methods are distinguished: the common (canonical) method of Lagrangians with partial derivatives (MLPD) and the method of Lagrangians with covariant derivatives (MLCD)

SU-E-T-427: Cell Surviving Fractions Derived From Tumor-Volume Variation During Radiotherapy for Non-Small Cell Lung Cancer: Comparison with Predictive Assays

Energy Technology Data Exchange (ETDEWEB)

Chvetsov, A; Schwartz, J; Mayr, N [University of Washington, Seattle, WA (United States); Yartsev, S [London Health Sciences Centre, London, Ontario (Canada)

2014-06-01

Purpose: To show that a distribution of cell surviving fractions S{sub 2} in a heterogeneous group of patients can be derived from tumor-volume variation curves during radiotherapy for non-small cell lung cancer. Methods: Our analysis was based on two data sets of tumor-volume variation curves for heterogeneous groups of 17 patients treated for nonsmall cell lung cancer with conventional dose fractionation. The data sets were obtained previously at two independent institutions by using megavoltage (MV) computed tomography (CT). Statistical distributions of cell surviving fractions S{sup 2} and cell clearance half-lives of lethally damaged cells T1/2 have been reconstructed in each patient group by using a version of the two-level cell population tumor response model and a simulated annealing algorithm. The reconstructed statistical distributions of the cell surviving fractions have been compared to the distributions measured using predictive assays in vitro. Results: Non-small cell lung cancer presents certain difficulties for modeling surviving fractions using tumor-volume variation curves because of relatively large fractional hypoxic volume, low gradient of tumor-volume response, and possible uncertainties due to breathing motion. Despite these difficulties, cell surviving fractions S{sub 2} for non-small cell lung cancer derived from tumor-volume variation measured at different institutions have similar probability density functions (PDFs) with mean values of 0.30 and 0.43 and standard deviations of 0.13 and 0.18, respectively. The PDFs for cell surviving fractions S{sup 2} reconstructed from tumor volume variation agree with the PDF measured in vitro. Comparison of the reconstructed cell surviving fractions with patient survival data shows that the patient survival time decreases as the cell surviving fraction increases. Conclusion: The data obtained in this work suggests that the cell surviving fractions S{sub 2} can be reconstructed from the tumor volume

SU-E-T-427: Cell Surviving Fractions Derived From Tumor-Volume Variation During Radiotherapy for Non-Small Cell Lung Cancer: Comparison with Predictive Assays

International Nuclear Information System (INIS)

Chvetsov, A; Schwartz, J; Mayr, N; Yartsev, S

2014-01-01

Purpose: To show that a distribution of cell surviving fractions S 2 in a heterogeneous group of patients can be derived from tumor-volume variation curves during radiotherapy for non-small cell lung cancer. Methods: Our analysis was based on two data sets of tumor-volume variation curves for heterogeneous groups of 17 patients treated for nonsmall cell lung cancer with conventional dose fractionation. The data sets were obtained previously at two independent institutions by using megavoltage (MV) computed tomography (CT). Statistical distributions of cell surviving fractions S 2 and cell clearance half-lives of lethally damaged cells T1/2 have been reconstructed in each patient group by using a version of the two-level cell population tumor response model and a simulated annealing algorithm. The reconstructed statistical distributions of the cell surviving fractions have been compared to the distributions measured using predictive assays in vitro. Results: Non-small cell lung cancer presents certain difficulties for modeling surviving fractions using tumor-volume variation curves because of relatively large fractional hypoxic volume, low gradient of tumor-volume response, and possible uncertainties due to breathing motion. Despite these difficulties, cell surviving fractions S 2 for non-small cell lung cancer derived from tumor-volume variation measured at different institutions have similar probability density functions (PDFs) with mean values of 0.30 and 0.43 and standard deviations of 0.13 and 0.18, respectively. The PDFs for cell surviving fractions S 2 reconstructed from tumor volume variation agree with the PDF measured in vitro. Comparison of the reconstructed cell surviving fractions with patient survival data shows that the patient survival time decreases as the cell surviving fraction increases. Conclusion: The data obtained in this work suggests that the cell surviving fractions S 2 can be reconstructed from the tumor volume variation curves measured

Cost-effective sampling of 137Cs-derived net soil redistribution: part 1 – estimating the spatial mean across scales of variation

International Nuclear Information System (INIS)

Li, Y.; Chappell, A.; Nyamdavaa, B.; Yu, H.; Davaasuren, D.; Zoljargal, K.

2015-01-01

The 137 Cs technique for estimating net time-integrated soil redistribution is valuable for understanding the factors controlling soil redistribution by all processes. The literature on this technique is dominated by studies of individual fields and describes its typically time-consuming nature. We contend that the community making these studies has inappropriately assumed that many 137 Cs measurements are required and hence estimates of net soil redistribution can only be made at the field scale. Here, we support future studies of 137 Cs-derived net soil redistribution to apply their often limited resources across scales of variation (field, catchment, region etc.) without compromising the quality of the estimates at any scale. We describe a hybrid, design-based and model-based, stratified random sampling design with composites to estimate the sampling variance and a cost model for fieldwork and laboratory measurements. Geostatistical mapping of net (1954–2012) soil redistribution as a case study on the Chinese Loess Plateau is compared with estimates for several other sampling designs popular in the literature. We demonstrate the cost-effectiveness of the hybrid design for spatial estimation of net soil redistribution. To demonstrate the limitations of current sampling approaches to cut across scales of variation, we extrapolate our estimate of net soil redistribution across the region, show that for the same resources, estimates from many fields could have been provided and would elucidate the cause of differences within and between regional estimates. We recommend that future studies evaluate carefully the sampling design to consider the opportunity to investigate 137 Cs-derived net soil redistribution across scales of variation. - Highlights: • The 137 Cs technique estimates net time-integrated soil redistribution by all processes. • It is time-consuming and dominated by studies of individual fields. • We use limited resources to estimate soil

The impact of gene expression variation on the robustness and evolvability of a developmental gene regulatory network.

Directory of Open Access Journals (Sweden)

David A Garfield

2013-10-01

Full Text Available Regulatory interactions buffer development against genetic and environmental perturbations, but adaptation requires phenotypes to change. We investigated the relationship between robustness and evolvability within the gene regulatory network underlying development of the larval skeleton in the sea urchin Strongylocentrotus purpuratus. We find extensive variation in gene expression in this network throughout development in a natural population, some of which has a heritable genetic basis. Switch-like regulatory interactions predominate during early development, buffer expression variation, and may promote the accumulation of cryptic genetic variation affecting early stages. Regulatory interactions during later development are typically more sensitive (linear, allowing variation in expression to affect downstream target genes. Variation in skeletal morphology is associated primarily with expression variation of a few, primarily structural, genes at terminal positions within the network. These results indicate that the position and properties of gene interactions within a network can have important evolutionary consequences independent of their immediate regulatory role.

Variationally derived coarse mesh methods using an alternative flux representation

International Nuclear Information System (INIS)

Wojtowicz, G.; Holloway, J.P.

1995-01-01

Investigation of a previously reported variational technique for the solution of the 1-D, 1-group neutron transport equation in reactor lattices has inspired the development of a finite element formulation of the method. Compared to conventional homogenization methods in which node homogenized cross sections are used, the coefficients describing this system take on greater spatial dependence. However, the methods employ an alternative flux representation which allows the transport equation to be cast into a form whose solution has only a slow spatial variation and, hence, requires relatively few variables to describe. This alternative flux representation and the stationary property of a variational principle define a class of coarse mesh discretizations of transport theory capable of achieving order of magnitude reductions of eigenvalue and pointwise scalar flux errors as compared with diffusion theory while retaining diffusion theory's relatively low cost. Initial results of a 1-D spectral element approach are reviewed and used to motivate the finite element implementation which is more efficient and almost as accurate; one and two group results of this method are described

Downscaling Satellite Precipitation with Emphasis on Extremes: A Variational 1-Norm Regularization in the Derivative Domain

Science.gov (United States)

Foufoula-Georgiou, E.; Ebtehaj, A. M.; Zhang, S. Q.; Hou, A. Y.

2013-01-01

The increasing availability of precipitation observations from space, e.g., from the Tropical Rainfall Measuring Mission (TRMM) and the forthcoming Global Precipitation Measuring (GPM) Mission, has fueled renewed interest in developing frameworks for downscaling and multi-sensor data fusion that can handle large data sets in computationally efficient ways while optimally reproducing desired properties of the underlying rainfall fields. Of special interest is the reproduction of extreme precipitation intensities and gradients, as these are directly relevant to hazard prediction. In this paper, we present a new formalism for downscaling satellite precipitation observations, which explicitly allows for the preservation of some key geometrical and statistical properties of spatial precipitation. These include sharp intensity gradients (due to high-intensity regions embedded within lower-intensity areas), coherent spatial structures (due to regions of slowly varying rainfall),and thicker-than-Gaussian tails of precipitation gradients and intensities. Specifically, we pose the downscaling problem as a discrete inverse problem and solve it via a regularized variational approach (variational downscaling) where the regularization term is selected to impose the desired smoothness in the solution while allowing for some steep gradients(called 1-norm or total variation regularization). We demonstrate the duality between this geometrically inspired solution and its Bayesian statistical interpretation, which is equivalent to assuming a Laplace prior distribution for the precipitation intensities in the derivative (wavelet) space. When the observation operator is not known, we discuss the effect of its misspecification and explore a previously proposed dictionary-based sparse inverse downscaling methodology to indirectly learn the observation operator from a database of coincidental high- and low-resolution observations. The proposed method and ideas are illustrated in case

Calculus of variations involving Caputo-Fabrizio fractional differentiation

Directory of Open Access Journals (Sweden)

Nuno R. O. Bastos

2018-02-01

Full Text Available This paper is devoted to study some variational problems with functionals containing the Caputo-Fabrizio fractional derivative, that is a fractional derivative with a non-singular kernel.

Investigating Variations in Gameplay: Cognitive Implications

Directory of Open Access Journals (Sweden)

Kamran Sedig

2015-01-01

Full Text Available There is increasing interest in creating computer games for learning, problem solving, and other high-level cognitive activities. When investigating whether gameplay is conducive to such activities, gameplay is often studied as a whole. As a result, cognitive implications can be linked to the game but not to its structural elements. Given that gameplay arises from interaction between the player and the game, it is the structural components of interaction that should be investigated to better understand the design of gameplay. Furthermore, minor variations in the components of interaction can have significant cognitive implications. However, such variation has not been studied yet. Thus, to gain a better understanding of how we can study the effect of interaction on the cognitive aspect of gameplay, we conducted an exploratory investigation of two computer games. These games were isomorphic at a deep level and only had one minor difference in the structure of their interaction. Volunteers played these games and discussed the cognitive processes that emerged. In one game, they primarily engaged in planning, but in the other game they primarily engaged in visualizing. This paper discusses the results of our investigation as well as its implications for the design of computer games.

Conformable variational iteration method

Directory of Open Access Journals (Sweden)

Omer Acan

2017-02-01

Full Text Available In this study, we introduce the conformable variational iteration method based on new defined fractional derivative called conformable fractional derivative. This new method is applied two fractional order ordinary differential equations. To see how the solutions of this method, linear homogeneous and non-linear non-homogeneous fractional ordinary differential equations are selected. Obtained results are compared the exact solutions and their graphics are plotted to demonstrate efficiency and accuracy of the method.

Insights into mechanisms of bacterial antigenic variation derived from the complete genome sequence of Anaplasma marginale.

Science.gov (United States)

Palmer, Guy H; Futse, James E; Knowles, Donald P; Brayton, Kelly A

2006-10-01

Persistence of Anaplasma spp. in the animal reservoir host is required for efficient tick-borne transmission of these pathogens to animals and humans. Using A. marginale infection of its natural reservoir host as a model, persistent infection has been shown to reflect sequential cycles in which antigenic variants emerge, replicate, and are controlled by the immune system. Variation in the immunodominant outer-membrane protein MSP2 is generated by a process of gene conversion, in which unique hypervariable region sequences (HVRs) located in pseudogenes are recombined into a single operon-linked msp2 expression site. Although organisms expressing whole HVRs derived from pseudogenes emerge early in infection, long-term persistent infection is dependent on the generation of complex mosaics in which segments from different HVRs recombine into the expression site. The resulting combinatorial diversity generates the number of variants both predicted and shown to emerge during persistence.

Homogenization of variational inequalities for obstacle problems

International Nuclear Information System (INIS)

Sandrakov, G V

2005-01-01

Results on the convergence of solutions of variational inequalities for obstacle problems are proved. The variational inequalities are defined by a non-linear monotone operator of the second order with periodic rapidly oscillating coefficients and a sequence of functions characterizing the obstacles. Two-scale and macroscale (homogenized) limiting variational inequalities are obtained. Derivation methods for such inequalities are presented. Connections between the limiting variational inequalities and two-scale and macroscale minimization problems are established in the case of potential operators.

Satellite-derived SIF and CO2 Observations Show Coherent Responses to Interannual Climate Variations

Science.gov (United States)

Butterfield, Z.; Hogikyan, A.; Kulawik, S. S.; Keppel-Aleks, G.

2017-12-01

Gross primary production (GPP) is the single largest carbon flux in the Earth system, but its sensitivity to changes in climate is subject to significant uncertainty. Satellite measurements of solar-induced chlorophyll fluorescence (SIF) offer insight into spatial and temporal patterns in GPP at a global scale and, combined with other satellite-derived datasets, provide unprecedented opportunity to explore interactions between atmospheric CO2, GPP, and climate variability. To explore potential drivers of GPP in the Northern Hemisphere (NH), we compare monthly-averaged SIF data from the Global Ozone Monitoring Experiment 2 (GOME-2) with observed anomalies in temperature (T; CRU-TS), liquid water equivalent (LWE) from the Gravity Recovery and Climate Experiment (GRACE), and photosynthetically active radiation (PAR; CERES SYN1deg). Using observations from 2007 through 2015 for several NH regions, we calculate month-specific sensitivities of SIF to variability in T, LWE, and PAR. These sensitivities provide insight into the seasonal progression of how productivity is affected by climate variability and can be used to effectively model the observed SIF signal. In general, we find that high temperatures are beneficial to productivity in the spring, but detrimental in the summer. The influences of PAR and LWE are more heterogeneous between regions; for example, higher LWE in North American temperate forest leads to decreased springtime productivity, while exhibiting a contrasting effect in water-limited regions. Lastly, we assess the influence of variations in terrestrial productivity on atmospheric carbon using a new lower tropospheric CO2 product derived from the Greenhouse Gases Observing Satellite (GOSAT). Together, these data shed light on the drivers of interannual variability in the annual cycle of NH atmospheric CO2, and may provide improved constraints on projections of long-term carbon cycle responses to climate change.

[Genetic variations in alcohol dehydrogenase, drinking habits and alcoholism

DEFF Research Database (Denmark)

Tolstrup, J.S.; Rasmussen, S.; Tybjaerg-Hansen, A.

2008-01-01

Alcohol is degraded primarily by alcohol dehydrogenase (ADH), and genetic variation that affects the rate of alcohol degradation is found in ADH1B and ADH1C. By genotyping 9,080 white men and women from the general population, we found that men and women with ADH1B slow versus fast alcohol degrad...

Downscaling Satellite Precipitation with Emphasis on Extremes: A Variational ℓ1-Norm Regularization in the Derivative Domain

Science.gov (United States)

Foufoula-Georgiou, E.; Ebtehaj, A. M.; Zhang, S. Q.; Hou, A. Y.

2014-05-01

The increasing availability of precipitation observations from space, e.g., from the Tropical Rainfall Measuring Mission (TRMM) and the forthcoming Global Precipitation Measuring (GPM) Mission, has fueled renewed interest in developing frameworks for downscaling and multi-sensor data fusion that can handle large data sets in computationally efficient ways while optimally reproducing desired properties of the underlying rainfall fields. Of special interest is the reproduction of extreme precipitation intensities and gradients, as these are directly relevant to hazard prediction. In this paper, we present a new formalism for downscaling satellite precipitation observations, which explicitly allows for the preservation of some key geometrical and statistical properties of spatial precipitation. These include sharp intensity gradients (due to high-intensity regions embedded within lower-intensity areas), coherent spatial structures (due to regions of slowly varying rainfall), and thicker-than-Gaussian tails of precipitation gradients and intensities. Specifically, we pose the downscaling problem as a discrete inverse problem and solve it via a regularized variational approach (variational downscaling) where the regularization term is selected to impose the desired smoothness in the solution while allowing for some steep gradients (called ℓ1-norm or total variation regularization). We demonstrate the duality between this geometrically inspired solution and its Bayesian statistical interpretation, which is equivalent to assuming a Laplace prior distribution for the precipitation intensities in the derivative (wavelet) space. When the observation operator is not known, we discuss the effect of its misspecification and explore a previously proposed dictionary-based sparse inverse downscaling methodology to indirectly learn the observation operator from a data base of coincidental high- and low-resolution observations. The proposed method and ideas are illustrated in case

Is there much variation in variation? Revisiting statistics of small area variation in health services research

Directory of Open Access Journals (Sweden)

Ibáñez Berta

2009-04-01

Full Text Available Abstract Background The importance of Small Area Variation Analysis for policy-making contrasts with the scarcity of work on the validity of the statistics used in these studies. Our study aims at 1 determining whether variation in utilization rates between health areas is higher than would be expected by chance, 2 estimating the statistical power of the variation statistics; and 3 evaluating the ability of different statistics to compare the variability among different procedures regardless of their rates. Methods Parametric bootstrap techniques were used to derive the empirical distribution for each statistic under the hypothesis of homogeneity across areas. Non-parametric procedures were used to analyze the empirical distribution for the observed statistics and compare the results in six situations (low/medium/high utilization rates and low/high variability. A small scale simulation study was conducted to assess the capacity of each statistic to discriminate between different scenarios with different degrees of variation. Results Bootstrap techniques proved to be good at quantifying the difference between the null hypothesis and the variation observed in each situation, and to construct reliable tests and confidence intervals for each of the variation statistics analyzed. Although the good performance of Systematic Component of Variation (SCV, Empirical Bayes (EB statistic shows better behaviour under the null hypothesis, it is able to detect variability if present, it is not influenced by the procedure rate and it is best able to discriminate between different degrees of heterogeneity. Conclusion The EB statistics seems to be a good alternative to more conventional statistics used in small-area variation analysis in health service research because of its robustness.

Variations and controlling factors of the coccolith weight in the Western Pacific Warm Pool over the last 200 ka

Science.gov (United States)

Liang, Dan; Liu, Chuanlian

2016-06-01

Using a coccolith weight analytic software (Particle Analyser), we analyze most abundant coccolith species in a sediment core from the central Western Pacific Warm Pool (WPWP) and calculate coccolith size and weight variations over the last 200 ka. These variations are compared with the trends of sea surface temperature (SST), primary productivity (PP), sea surface salinity (SSS), and insolation. Our results demonstrate that the size and weight of the coccoliths varied in response to variations of these factors, and their average total weight is primarily related to the relative abundance of the dominant species GEO ( Gephyrocapsa oceanica). The variation in weight of EMI ( Emiliania huxleyi) and GEE ( Gephyrocapsa ericsonii) are mainly influenced by nutrients, and the variation of GEM ( G. muellerae conformis) and GEO ( G. oceanica) weight are mainly influenced by SST. For all of the taxa weight, PP and SST present apparent precession or semi-precession cycles, we consider that the mono-coccolith weight of the Equatorial Western Pacific is primarily affected by precession drived thermocline and nutricline variation.

Partial diel migration: A facultative migration underpinned by long-term inter-individual variation.

Science.gov (United States)

Harrison, Philip M; Gutowsky, Lee F G; Martins, Eduardo G; Patterson, David A; Cooke, Steven J; Power, Michael

2017-09-01

The variations in migration that comprise partial diel migrations, putatively occur entirely as a consequence of behavioural flexibility. However, seasonal partial migrations are increasingly recognised to be mediated by a combination of reversible plasticity in response to environmental variation and individual variation due to genetic and environmental effects. Here, we test the hypothesis that while partial diel migration heterogeneity occurs primarily due to short-term within-individual flexibility in behaviour, long-term individual differences in migratory behaviour also underpin this migration variation. Specifically, we use a hierarchical behavioural reaction norm approach to partition within- and among-individual variation in depth use and diel plasticity in depth use, across short- and long-term time-scales, in a group of 47 burbot (Lota lota) tagged with depth-sensing acoustic telemetry transmitters. We found that within-individual variation at the among-dates-within-seasons and among-seasons scale, explained the dominant proportion of phenotypic variation. However, individuals also repeatedly differed in their expression of migration behaviour over the 2 year study duration. These results reveal that diel migration variation occurs primarily due to short-term within-individual flexibility in depth use and diel migration behaviour. However, repeatable individual differences also played a key role in mediating partial diel migration. These findings represent a significant advancement of our understanding of the mechanisms generating the important, yet poorly understood phenomena of partial diel migration. Moreover, given the pervasive occurrence of diel migrations across aquatic taxa, these findings indicate that individual differences have an important, yet previously unacknowledged role in structuring the temporal and vertical dynamics of aquatic ecosystems. © 2017 The Authors. Journal of Animal Ecology © 2017 British Ecological Society.

Stress Field Variation after the 2001 Skyros Earthquake, Greece, Derived from Seismicity Rate Changes

Science.gov (United States)

Leptokaropoulos, K.; Papadimitriou, E.; Orlecka-Sikora, B.; Karakostas, V.

2012-04-01

The spatial variation of the stress field (ΔCFF) after the 2001 strong (Mw=6.4) Skyros earthquake in North Aegean Sea, Greece, is investigated in association with the changes of earthquake production rates. A detailed slip model is considered in which the causative fault is consisted of several sub-faults with different coseismic slip onto each one of them. First the spatial distribution of aftershock productivity is compared with the static stress changes due to the coseismic slip. Calculations of ΔCFF are performed at different depths inside the seismogenic layer, defined from the vertical distribution of the aftershocks. Seismicity rates of the smaller magnitude events with M≥Mc for different time increments before and after the main shock are then derived from the application of a Probability Density Function (PDF). These rates are computed by spatially smoothing the seismicity and for this purpose a normal grid of rectangular cells is superimposed onto the area and the PDF determines seismicity rate values at the center of each cell. The differences between the earthquake occurrence rates before and after the main shock are compared and used as input data in a stress inversion algorithm based upon the Rate/State dependent friction concept in order to provide an independent estimation of stress changes. This model incorporates the physical properties of the fault zones (characteristic relaxation time, fault constitutive parameters, effective friction coefficient) with a probabilistic estimation of the spatial distribution of seismicity rates, derived from the application of the PDF. The stress patterns derived from the previously mentioned approaches are compared and the quantitative correlation between the respective results is accomplished by the evaluation of Pearson linear correlation coefficient and its confidence intervals to quantify their significance. Different assumptions and combinations of the physical and statistical parameters are tested for

Minimizers with discontinuous velocities for the electromagnetic variational method

International Nuclear Information System (INIS)

De Luca, Jayme

2010-01-01

The electromagnetic two-body problem has neutral differential delay equations of motion that, for generic boundary data, can have solutions with discontinuous derivatives. If one wants to use these neutral differential delay equations with arbitrary boundary data, solutions with discontinuous derivatives must be expected and allowed. Surprisingly, Wheeler-Feynman electrodynamics has a boundary value variational method for which minimizer trajectories with discontinuous derivatives are also expected, as we show here. The variational method defines continuous trajectories with piecewise defined velocities and accelerations, and electromagnetic fields defined by the Euler-Lagrange equations on trajectory points. Here we use the piecewise defined minimizers with the Lienard-Wierchert formulas to define generalized electromagnetic fields almost everywhere (but on sets of points of zero measure where the advanced/retarded velocities and/or accelerations are discontinuous). Along with this generalization we formulate the generalized absorber hypothesis that the far fields vanish asymptotically almost everywhere and show that localized orbits with far fields vanishing almost everywhere must have discontinuous velocities on sewing chains of breaking points. We give the general solution for localized orbits with vanishing far fields by solving a (linear) neutral differential delay equation for these far fields. We discuss the physics of orbits with discontinuous derivatives stressing the differences to the variational methods of classical mechanics and the existence of a spinorial four-current associated with the generalized variational electrodynamics.

Explaining variation in nascent entrepreneurship

NARCIS (Netherlands)

A.J. van Stel (André); A.R.M. Wennekers (Sander); P. Reynolds (Paul); A.R. Thurik (Roy)

2004-01-01

textabstractThis paper aims at explaining cross-country variation in nascent entrepreneurship. Regression analysis is applied using various explanatory variables derived from three different approaches. We make use of the Global Entrepreneurship Monitor database, including nascent entrepreneurship

Nodal algorithm derived from a new variational principle

International Nuclear Information System (INIS)

Watson, Fernando V.

1995-01-01

As a by-product of the research being carried on by the author on methods of recovering pin power distribution of PWR cores, a nodal algorithm based on a modified variational principle for the two group diffusion equations has been obtained. The main feature of the new algorithm is the low dimensionality achieved by the reduction of the original diffusion equations to a system of algebraic Eigen equations involving the average sources only, instead of sources and interface group currents used in conventional nodal methods. The advantage of this procedure is discussed and results generated by the new algorithm and by a finite difference code are compared. (author). 2 refs, 7 tabs

Y-Chromosomal Diversity in Europe Is Clinal and Influenced Primarily by Geography, Rather than by Language

Science.gov (United States)

Rosser, Zoë H.; Zerjal, Tatiana; Hurles, Matthew E.; Adojaan, Maarja; Alavantic, Dragan; Amorim, António; Amos, William; Armenteros, Manuel; Arroyo, Eduardo; Barbujani, Guido; Beckman, Gunhild; Beckman, Lars; Bertranpetit, Jaume; Bosch, Elena; Bradley, Daniel G.; Brede, Gaute; Cooper, Gillian; Côrte-Real, Helena B. S. M.; de Knijff, Peter; Decorte, Ronny; Dubrova, Yuri E.; Evgrafov, Oleg; Gilissen, Anja; Glisic, Sanja; Gölge, Mukaddes; Hill, Emmeline W.; Jeziorowska, Anna; Kalaydjieva, Luba; Kayser, Manfred; Kivisild, Toomas; Kravchenko, Sergey A.; Krumina, Astrida; Kučinskas, Vaidutis; Lavinha, João; Livshits, Ludmila A.; Malaspina, Patrizia; Maria, Syrrou; McElreavey, Ken; Meitinger, Thomas A.; Mikelsaar, Aavo-Valdur; Mitchell, R. John; Nafa, Khedoudja; Nicholson, Jayne; Nørby, Søren; Pandya, Arpita; Parik, Jüri; Patsalis, Philippos C.; Pereira, Luísa; Peterlin, Borut; Pielberg, Gerli; Prata, Maria João; Previderé, Carlo; Roewer, Lutz; Rootsi, Siiri; Rubinsztein, D. C.; Saillard, Juliette; Santos, Fabrício R.; Stefanescu, Gheorghe; Sykes, Bryan C.; Tolun, Aslihan; Villems, Richard; Tyler-Smith, Chris; Jobling, Mark A.

2000-01-01

Clinal patterns of autosomal genetic diversity within Europe have been interpreted in previous studies in terms of a Neolithic demic diffusion model for the spread of agriculture; in contrast, studies using mtDNA have traced many founding lineages to the Paleolithic and have not shown strongly clinal variation. We have used 11 human Y-chromosomal biallelic polymorphisms, defining 10 haplogroups, to analyze a sample of 3,616 Y chromosomes belonging to 47 European and circum-European populations. Patterns of geographic differentiation are highly nonrandom, and, when they are assessed using spatial autocorrelation analysis, they show significant clines for five of six haplogroups analyzed. Clines for two haplogroups, representing 45% of the chromosomes, are continentwide and consistent with the demic diffusion hypothesis. Clines for three other haplogroups each have different foci and are more regionally restricted and are likely to reflect distinct population movements, including one from north of the Black Sea. Principal-components analysis suggests that populations are related primarily on the basis of geography, rather than on the basis of linguistic affinity. This is confirmed in Mantel tests, which show a strong and highly significant partial correlation between genetics and geography but a low, nonsignificant partial correlation between genetics and language. Genetic-barrier analysis also indicates the primacy of geography in the shaping of patterns of variation. These patterns retain a strong signal of expansion from the Near East but also suggest that the demographic history of Europe has been complex and influenced by other major population movements, as well as by linguistic and geographic heterogeneities and the effects of drift. PMID:11078479

Disgust sensitivity is primarily associated with purity-based moral judgments.

Science.gov (United States)

Wagemans, Fieke M A; Brandt, Mark J; Zeelenberg, Marcel

2018-03-01

Individual differences in disgust sensitivity are associated with a range of judgments and attitudes related to the moral domain. Some perspectives suggest that the association between disgust sensitivity and moral judgments will be equally strong across all moral domains (i.e., purity, authority, loyalty, care, fairness, and liberty). Other perspectives predict that disgust sensitivity is primarily associated with judgments of specific moral domains (e.g., primarily purity). However, no study has systematically tested if disgust sensitivity is associated with moral judgments of the purity domain specifically, more generally to moral judgments of the binding moral domains, or to moral judgments of all of the moral domains equally. Across 5 studies (total N = 1,104), we find consistent evidence for the notion that disgust sensitivity relates more strongly to moral condemnation of purity-based transgressions (meta-analytic r = .40) than to moral condemnation of transgressions of any of the other domains (range meta-analytic rs: .07-.27). Our findings are in line with predictions from Moral Foundations Theory, which predicts that personality characteristics like disgust sensitivity make people more sensitive to a certain set of moral issues. (PsycINFO Database Record (c) 2018 APA, all rights reserved).

PRIMARILY RESULTS OF PHYTOPLANKTON DNA AND VARIATION TO ENVIRONMENTAL FACTORS IN DURRES`S BAY COASTAL WATERS (ALBANIA

Directory of Open Access Journals (Sweden)

Laura Gjyli

2013-10-01

Full Text Available After isolation of phytoplankton DNA in coastal waters of Durres Bay, Albania, quantification and analysis of quality were investigated with spectrophotometric analysis. Analysis of UV absorption by the nucleotides provides a simple and accurate estimation of the concentration of nucleic acids in a sample. This method is however limited by the quantity of DNA and the purity of the preparation. Also biotic environment factors as Chlorophyll a and abiotic environment factors as temperature, salinity, pH, dissolved oxygen, turbidity, nitrate, phosphate were investigated to assess DNA quantities in different environment conditions. The Chlorophyll a was studied also to access the level of trophy. The sample stations were: Golem Beach (GB, Channel of Plepa (ChP, Hekurudha Beach (HB, Ex-Fuel Quay in Marine Durres Harbour (EFQ, Water Channel of Durres City (WChDC and Currila Beach (CB. Samples are taken in one meter depth from the water surface. Water samples were collected monthly from April to October 2011. The most abundant stations with phytoplankton DNA are Channel of Plepa and Water Channel of Durres City. This confirms that there are spills of fresh waters, sewage or agricultural water spills, often discharge in coastal waters. Referring Mutliple Regression Analysis and single regression analysis, the association between phytoplankton DNA and environment factors was strong (R2 = 0.75. Basing in single correlation and statistically significance (p-value ≤ 0.05, the enviroment factors that correlated to phytoplankton DNA were pH, salinity and phosphate; explaining thus the variation of total phytoplankton in Durres Bay coastal waters.

Accounting for the role of hematocrit in between-subject variations of MRI-derived baseline cerebral hemodynamic parameters and functional BOLD responses.

Science.gov (United States)

Xu, Feng; Li, Wenbo; Liu, Peiying; Hua, Jun; Strouse, John J; Pekar, James J; Lu, Hanzhang; van Zijl, Peter C M; Qin, Qin

2018-01-01

Baseline hematocrit fraction (Hct) is a determinant for baseline cerebral blood flow (CBF) and between-subject variation of Hct thus causes variation in task-based BOLD fMRI signal changes. We first verified in healthy volunteers (n = 12) that Hct values can be derived reliably from venous blood T 1 values by comparison with the conventional lab test. Together with CBF measured using phase-contrast MRI, this noninvasive estimation of Hct, instead of using a population-averaged Hct value, enabled more individual determination of oxygen delivery (DO 2 ), oxygen extraction fraction (OEF), and cerebral metabolic rate of oxygen (CMRO 2 ). The inverse correlation of CBF and Hct explained about 80% of between-subject variation of CBF in this relatively uniform cohort of subjects, as expected based on the regulation of DO 2 to maintain constant CMRO 2 . Furthermore, we compared the relationships of visual task-evoked BOLD response with Hct and CBF. We showed that Hct and CBF contributed 22%-33% of variance in BOLD signal and removing the positive correlation with Hct and negative correlation with CBF allowed normalization of BOLD signal with 16%-22% lower variability. The results of this study suggest that adjustment for Hct effects is useful for studies of MRI perfusion and BOLD fMRI. Hum Brain Mapp 39:344-353, 2018. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Diurnal variations in wastewater characteristics at main out fall in Lahore

International Nuclear Information System (INIS)

Haider, H.; Ali, W.; Ali, W.

2012-01-01

Variations in the flow and pollutants concentrations during the day were monitored at the Main Out fall disposal station of the city of Lahore. The laboratory analysis of the wastewater samples collected at 2 hour interval on fifth and sixth May, 2009 for pH, temperature, alkalinity, hardness, Biochemical Oxygen Demand (BOD5), BOD5 Filtered, Total Kjeldahl Nitrogen (TKN), Ammonia Nitrogen (NH/sub 3/-N), chlorides, solids, turbidity, sulphates and nitrates were carried out. Average values and standard deviations were determined to assess the type of wastewater treatment. Correlation between BOD5 and BOD5 Filtered was developed through regression analysis. Diurnal variations in the Ultimate Biochemical Oxygen Demand (BODU) at the Main Out fall based on Carbonaceous Biochemical Oxygen Demand (CBODU) and Nitrogenous Biochemical Oxygen Demand (NBODU) are also estimated. The ratio between CBODU/NBODU ranges between 0.86 to 1.8 during a day at Main Out fall. This variation is primarily due to the large diurnal variation in CBODU values as a result of industrial activities in the study area. The BOD5/ TKN ratio varies between 3.3 and 6.9 and the calculated BODU (i.e., CBODU + NBODU) was found to be almost double of BOD5 during most part of the day primarily due to inclusion of NBOD. The study results reveal the importance of NBOD while designing the wastewater treatment facilities and implementing a water quality control strategy for the River Ravi. (author)

Incidence of diseases primarily affecting the skin by age group: population-based epidemiologic study in Olmsted County, Minnesota, and comparison with age-specific incidence rates worldwide.

Science.gov (United States)

Wessman, Laurel L; Andersen, Louise K; Davis, Mark D P

2018-01-29

Understanding the effects of age on the epidemiology of diseases primarily affecting the skin is important to the practice of dermatology, both for proper allocation of resources and for optimal patient-centered care. To fully appreciate the effect that age may have on the population-based calculations of incidence of diseases primarily affecting the skin in Olmsted County, Minnesota, and worldwide, we performed a review of all relevant Rochester Epidemiology Project-published data and compared them to similar reports in the worldwide English literature. Using the Rochester Epidemiology Project, population-based epidemiologic studies have been performed to estimate the incidence of specific skin diseases over the past 50 years. In older persons (>65 years), nonmelanoma skin cancer, lentigo maligna, herpes zoster, delusional infestation, venous stasis syndrome, venous ulcer, and burning mouth syndrome were more commonly diagnosed. In those younger than 65 years, atypical nevi, psoriatic arthritis, pityriasis rosea, herpes progenitalis, genital warts, alopecia areata, hidradenitis suppurativa, infantile hemangioma, Behçet's disease, and sarcoidosis (isolated cutaneous, with sarcoidosis-specific cutaneous lesions and with erythema nodosum) had a higher incidence. Many of the incidence rates by age group of diseases primarily affecting the skin derived from the Rochester Epidemiology Project were similar to those reported elsewhere. © 2018 The International Society of Dermatology.

Primarily Experimental Results for a W Wire Array Z Pinch

International Nuclear Information System (INIS)

Kuai Bin; Aici, Qiu; Wang Liangping; Zeng Zhengzhong; Wang Wensheng; Cong Peitian; Gai Tongyang; Wei Fuli; Guo Ning; Zhang Zhong

2006-01-01

Primarily experimental results are given for a W wire array Z pinch imploded with up to 2 MA in 100 ns on a Qiangguang-I pulsed power generator. The configuration and parameters of the generator, the W wire array load assembly and the diagnostic system for the experiment are described. The total X-ray energy has been obtained with a averaged power of X-ray radiation of 1.28 TW

Our Gods: Variation in Supernatural Minds

Science.gov (United States)

Purzycki, Benjamin G.; Sosis, Richard

In this chapter we examine variation in the contents of supernatural minds across cultures and the social correlates of this variation. We first provide a sketch of how humans are capable of representing supernatural minds and emphasize the significance of the types of knowledge attributed to supernatural agents. We then argue that the contents of supernatural minds as represented cross-culturally will primarily rest on or between two poles: knowledge of people's moral behavior and knowledge of people's ritualized costly behavior. Communities which endorse omniscient supernatural agents that are highly concerned with moral behavior will emphasize the importance of shared beliefs (cultural consensus), whereas communities which possess supernatural agents with limited social knowledge who are concerned with ritual actions will emphasize shared behavioral patterns (social consensus).We conclude with a brief discussion about the contexts in which these patterns occur.

A Variational approach to thin film hydrodynamics of binary mixtures

KAUST Repository

Xu, Xinpeng

2015-02-04

In order to model the dynamics of thin films of mixtures, solutions, and suspensions, a thermodynamically consistent formulation is needed such that various coexisting dissipative processes with cross couplings can be correctly described in the presence of capillarity, wettability, and mixing effects. In the present work, we apply Onsager\\'s variational principle to the formulation of thin film hydrodynamics for binary fluid mixtures. We first derive the dynamic equations in two spatial dimensions, one along the substrate and the other normal to the substrate. Then, using long-wave asymptotics, we derive the thin film equations in one spatial dimension along the substrate. This enables us to establish the connection between the present variational approach and the gradient dynamics formulation for thin films. It is shown that for the mobility matrix in the gradient dynamics description, Onsager\\'s reciprocal symmetry is automatically preserved by the variational derivation. Furthermore, using local hydrodynamic variables, our variational approach is capable of introducing diffusive dissipation beyond the limit of dilute solute. Supplemented with a Flory-Huggins-type mixing free energy, our variational approach leads to a thin film model that treats solvent and solute in a symmetric manner. Our approach can be further generalized to include more complicated free energy and additional dissipative processes.

TAXATION AND INTERNAL MIGRATION - EVIDENCE FROM THE SWISS CENSUS USING COMMUNITY-LEVEL VARIATION IN INCOME TAX RATES

OpenAIRE

Liebig, Thomas; Puhani, Patrick A.; Sousa-Poza, Alfonso

2006-01-01

We investigate the relationship between income tax rate variation and internal migration for the unique case of Switzerland, whose system of determining tax rates primarily at the community level results in enough variation to permit analysis of their influence on migration. Specifically, using Swiss census data, we analyze migratory responses to tax rate variations for various groups defined by age, education, and nationality/residence permit. The results suggest that young Swiss college gra...

Variational calculus with constraints on general algebroids

Energy Technology Data Exchange (ETDEWEB)

Grabowska, Katarzyna [Physics Department, Division of Mathematical Methods in Physics, University of Warsaw, Hoza 69, 00-681 Warszawa (Poland); Grabowski, Janusz [Institute of Mathematics, Polish Academy of Sciences, Sniadeckich 8, PO Box 21, 00-956 Warszawa (Poland)], E-mail: konieczn@fuw.edu.pl, E-mail: jagrab@impan.gov.pl

2008-05-02

Variational calculus on a vector bundle E equipped with a structure of a general algebroid is developed, together with the corresponding analogs of Euler-Lagrange equations. Constrained systems are introduced in the variational and geometrical settings. The constrained Euler-Lagrange equations are derived for analogs of holonomic, vakonomic and nonholonomic constraints. This general model covers the majority of first-order Lagrangian systems which are present in the literature and reduces to the standard variational calculus and the Euler-Lagrange equations in classical mechanics for E = TM.

Variational calculus with constraints on general algebroids

International Nuclear Information System (INIS)

Grabowska, Katarzyna; Grabowski, Janusz

2008-01-01

Variational calculus on a vector bundle E equipped with a structure of a general algebroid is developed, together with the corresponding analogs of Euler-Lagrange equations. Constrained systems are introduced in the variational and geometrical settings. The constrained Euler-Lagrange equations are derived for analogs of holonomic, vakonomic and nonholonomic constraints. This general model covers the majority of first-order Lagrangian systems which are present in the literature and reduces to the standard variational calculus and the Euler-Lagrange equations in classical mechanics for E = TM

Satellite Derived Water Quality Observations Are Related to River Discharge and Nitrogen Loads in Pensacola Bay, Florida

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John C. Lehrter

2017-09-01

Full Text Available Relationships between satellite-derived water quality variables and river discharges, concentrations and loads of nutrients, organic carbon, and sediments were investigated over a 9-year period (2003–2011 in Pensacola Bay, Florida, USA. These analyses were conducted to better understand which river forcing factors were the primary drivers of estuarine variability in several water quality variables. Remote sensing reflectance time-series data were retrieved from the MEdium Resolution Imaging Spectrometer (MERIS and used to calculate monthly and annual estuarine time-series of chlorophyll a (Chla, colored dissolved organic matter (CDOM, and total suspended sediments (TSS. Monthly MERIS Chla varied from 2.0 mg m−3 in the lower region of the bay to 17.2 mg m−3 in the upper bay. MERIS CDOM and TSS exhibited similar patterns with ranges of 0.51–2.67 (m−1 and 0.11–8.9 (g m−3. Variations in the MERIS-derived monthly and annual Chla, CDOM, and TSS time-series were significantly related to monthly and annual river discharge and loads of nitrogen, organic carbon, and suspended sediments from the Escambia and Yellow rivers. Multiple regression models based on river loads (independent variables and MERIS Chla, CDOM, or TSS (dependent variables explained significant fractions of the variability (up to 62% at monthly and annual scales. The most significant independent variables in the regressions were river nitrogen loads, which were associated with increased MERIS Chla, CDOM, and TSS concentrations, and river suspended sediment loads, which were associated with decreased concentrations. In contrast, MERIS water quality variations were not significantly related to river total phosphorus loads. The spatially synoptic, nine-year satellite record expanded upon the spatial extent of past field studies to reveal previously unseen system-wide responses to river discharge and loading variation. The results indicated that variations in Pensacola Bay Chla

On the correspondence between quantum and classical variational principles

International Nuclear Information System (INIS)

Ruiz, D.E.; Dodin, I.Y.

2015-01-01

Classical variational principles can be deduced from quantum variational principles via formal reparameterization of the latter. It is shown that such reparameterization is possible without invoking any assumptions other than classicality and without appealing to dynamical equations. As examples, first principle variational formulations of classical point-particle and cold-fluid motion are derived from their quantum counterparts for Schrödinger, Pauli, and Klein–Gordon particles

Ensembl variation resources

Directory of Open Access Journals (Sweden)

Marin-Garcia Pablo

2010-05-01

Full Text Available Abstract Background The maturing field of genomics is rapidly increasing the number of sequenced genomes and producing more information from those previously sequenced. Much of this additional information is variation data derived from sampling multiple individuals of a given species with the goal of discovering new variants and characterising the population frequencies of the variants that are already known. These data have immense value for many studies, including those designed to understand evolution and connect genotype to phenotype. Maximising the utility of the data requires that it be stored in an accessible manner that facilitates the integration of variation data with other genome resources such as gene annotation and comparative genomics. Description The Ensembl project provides comprehensive and integrated variation resources for a wide variety of chordate genomes. This paper provides a detailed description of the sources of data and the methods for creating the Ensembl variation databases. It also explores the utility of the information by explaining the range of query options available, from using interactive web displays, to online data mining tools and connecting directly to the data servers programmatically. It gives a good overview of the variation resources and future plans for expanding the variation data within Ensembl. Conclusions Variation data is an important key to understanding the functional and phenotypic differences between individuals. The development of new sequencing and genotyping technologies is greatly increasing the amount of variation data known for almost all genomes. The Ensembl variation resources are integrated into the Ensembl genome browser and provide a comprehensive way to access this data in the context of a widely used genome bioinformatics system. All Ensembl data is freely available at http://www.ensembl.org and from the public MySQL database server at ensembldb.ensembl.org.

Prevalence, risk surfaces and inter-municipality variations in caries experience in Danish children and adolescents in 2012

DEFF Research Database (Denmark)

Nørrisgaard, Pia Elisabeth; Qvist, Vibeke; Ekstrand, Kim

2016-01-01

prevalence by def-s = 0/DMF-S = 0. Inter-municipality variations were illustrated. Multivariate regression analyses were applied to assess the influence of fluoride concentration in drinking water, proportion of immigrants and personal income on the inter-municipality variation in mean def-s/DMF-S. Results......-municipality variation in caries experience. Materials and methods Data was collected in the public Child Dental Health Service. In total, 5636 caries registrations on 3-, 9-, 15- and 18-year-olds were collected in 35 of the 98 Danish municipalities. Caries experience was expressed by mean def-s/DMF-S and caries...... Only 4.6% of 3-year-olds had def-s (mean = 0.25), compared to 44.9% of 9-year-olds (mean = 3.07), primarily located occlusally and interproximally on the primary molars. Mean DMF-S for the 9-, 15- and 18-year-olds were 0.27, 1.97 and 4.40, respectively. Caries were primarily located occlusally...

Introduction to the Special Issue on Advancing Methods for Analyzing Dialect Variation.

Science.gov (United States)

Clopper, Cynthia G

2017-07-01

Documenting and analyzing dialect variation is traditionally the domain of dialectology and sociolinguistics. However, modern approaches to acoustic analysis of dialect variation have their roots in Peterson and Barney's [(1952). J. Acoust. Soc. Am. 24, 175-184] foundational work on the acoustic analysis of vowels that was published in the Journal of the Acoustical Society of America (JASA) over 6 decades ago. Although Peterson and Barney (1952) were not primarily concerned with dialect variation, their methods laid the groundwork for the acoustic methods that are still used by scholars today to analyze vowel variation within and across languages. In more recent decades, a number of methodological advances in the study of vowel variation have been published in JASA, including work on acoustic vowel overlap and vowel normalization. The goal of this special issue was to honor that tradition by bringing together a set of papers describing the application of emerging acoustic, articulatory, and computational methods to the analysis of dialect variation in vowels and beyond.

Host genome variations and risk of infections during induction treatment for childhood acute lymphoblastic leukaemia

DEFF Research Database (Denmark)

Lund, Bendik; Wesolowska-Andersen, Agata; Lausen, Birgitte

2014-01-01

Objectives: To investigate association of host genomic variation and risk of infections during treatment for childhood acute lymphoblastic leukaemia (ALL). Methods: We explored association of 34 000 singlenucleotide polymorphisms (SNPs) related primarily to pharmacogenomics and immune function...

Diurnal variations of Titan

Science.gov (United States)

Cui, J.; Galand, M.; Yelle, R. V.; Vuitton, V.; Wahlund, J.-E.; Lavvas, P. P.; Mueller-Wodarg, I. C. F.; Kasprzak, W. T.; Waite, J. H.

2009-04-01

We present our analysis of the diurnal variations of Titan's ionosphere (between 1,000 and 1,400 km) based on a sample of Ion Neutral Mass Spectrometer (INMS) measurements in the Open Source Ion (OSI) mode obtained from 8 close encounters of the Cassini spacecraft with Titan. Though there is an overall ion depletion well beyond the terminator, the ion content on Titan's nightside is still appreciable, with a density plateau of ~700 cm-3 below ~1,300 km. Such a plateau is associated with the combination of distinct diurnal variations of light and heavy ions. Light ions (e.g. CH5+, HCNH+, C2H5+) show strong diurnal variation, with clear bite-outs in their nightside distributions. In contrast, heavy ions (e.g. c-C3H3+, C2H3CNH+, C6H7+) present modest diurnal variation, with significant densities observed on the nightside. We propose that the distinctions between light and heavy ions are associated with their different chemical loss pathways, with the former primarily through "fast" ion-neutral chemistry and the latter through "slow" electron dissociative recombination. The INMS data suggest day-to-night transport as an important source of ions on Titan's nightside, to be distinguished from the conventional scenario of auroral ionization by magnetospheric particles as the only ionizing source on the nightside. This is supported by the strong correlation between the observed night-to-day ion density ratios and the associated ion lifetimes. We construct a time-dependent ion chemistry model to investigate the effects of day-to-night transport on the ionospheric structures of Titan. The predicted diurnal variation has similar general characteristics to those observed, with some apparent discrepancies which could be reconciled by imposing fast horizontal thermal winds in Titan's upper atmosphere.

SULT1A1 copy number variation: ethnic distribution analysis in an Indian population.

Science.gov (United States)

Almal, Suhani; Padh, Harish

2017-11-01

Cytosolic sulfotransferases (SULTs) are phase II detoxification enzymes involved in metabolism of numerous xenobiotics, drugs and endogenous compounds. Interindividual variation in sulfonation capacity is important for determining an individual's response to xenobiotics. SNPs in SULTs, mainly SULT1A1 have been associated with cancer risk and also with response to therapeutic agents. Copy number variation (CNVs) in SULT1A1 is found to be correlated with altered enzyme activity. This short report primarily focuses on CNV in SULT1A1 and its distribution among different ethnic populations around the globe. Frequency distribution of SULT1A1 copy number (CN) in 157 healthy Indian individuals was assessed using florescent-based quantitative PCR assay. A range of 1 to >4 copies, with a frequency of SULT1A1 CN =2 (64.9%) the highest, was observed in our (Indian) population. Upon comparative analysis of frequency distribution of SULT1A1 CN among diverse population groups, a statistically significant difference was observed between Indians (our data) and African-American (AA) (p = 0.0001) and South African (Tswana) (p populations. Distribution of CNV in the Indian population was found to be similar to that in European-derived populations of American and Japanese. CNV of SULT1A1 varies significantly among world populations and may be one of the determinants of health and diseases.

On quadratic variation of martingales

Indian Academy of Sciences (India)

On quadratic variation of martingales. 459. The proof relied on the theory of stochastic integration. Subsequently, in Karandikar. [4], the formula was derived using only Doob's maximal inequality. Thus this could be the starting point for the development of stochastic calculus for continuous semimartingales without bringing in ...

Identification of a novel CoA synthase isoform, which is primarily expressed in Brain

International Nuclear Information System (INIS)

Nemazanyy, Ivan; Panasyuk, Ganna; Breus, Oksana; Zhyvoloup, Alexander; Filonenko, Valeriy; Gout, Ivan T.

2006-01-01

CoA and its derivatives Acetyl-CoA and Acyl-CoA are important players in cellular metabolism and signal transduction. CoA synthase is a bifunctional enzyme which mediates the final stages of CoA biosynthesis. In previous studies, we have reported molecular cloning, biochemical characterization, and subcellular localization of CoA synthase (CoASy). Here, we describe the existence of a novel CoA synthase isoform, which is the product of alternative splicing and possesses a 29aa extension at the N-terminus. We termed it CoASy β and originally identified CoA synthase, CoASy α. The transcript specific for CoASy β was identified by electronic screening and by RT-PCR analysis of various rat tissues. The existence of this novel isoform was further confirmed by immunoblot analysis with antibodies directed to the N-terminal peptide of CoASy β. In contrast to CoASy α, which shows ubiquitous expression, CoASy β is primarily expressed in Brain. Using confocal microscopy, we demonstrated that both isoforms are localized on mitochondria. The N-terminal extension does not affect the activity of CoA synthase, but possesses a proline-rich sequence which can bring the enzyme into complexes with signalling proteins containing SH3 or WW domains. The role of this novel isoform in CoA biosynthesis, especially in Brain, requires further elucidation

Hospital variation in sphincter preservation for elderly rectal cancer patients.

Science.gov (United States)

Dodgion, Christopher M; Neville, Bridget A; Lipsitz, Stuart R; Schrag, Deborah; Breen, Elizabeth; Zinner, Michael J; Greenberg, Caprice C

2014-09-01

The primary goal of an operation for rectal cancer is to cure cancer and, where possible, preserve continence. A wide range of sphincter preservation rates have been reported. This study evaluated hospital variation in the use of low anterior resection (LAR), local excision (LE), and abdominoperineal resection (APR) in the treatment of elderly rectal cancer patients. Using Surveillance, Epidemiology, and End Results-Medicare linked data, we identified 4959 patients older than 65 y with stage I-III rectal cancer diagnosed from 2000-2005 who underwent operative intervention at one of 370 hospitals. We evaluated the distribution of hospital-specific procedure rates and used generalized mixed models with random hospital effects to examine the influence of patient characteristics and hospital on operation type, using APR as a reference. The median hospital performed APR on 33% of elderly patients with rectal cancer. Hospital was a stronger predictor of LAR receipt than any patient characteristic, explaining 32% of procedure choice, but not a strong predictor of LE, explaining only 3.8%. Receipt of LE was primarily related to tumor size and tumor stage, which combined explained 31% of procedure variation. Receipt of LE is primarily determined by patient characteristics. In contrast, the hospital where surgery is performed significantly influences whether a patient undergoes an LAR or APR. Understanding the factors that cause this institutional variation is crucial to ensuring equitable availability of sphincter preservation. Copyright © 2014 Elsevier Inc. All rights reserved.

Generalized variational formulations for extended exponentially fractional integral

Directory of Open Access Journals (Sweden)

Zuo-Jun Wang

2016-01-01

Full Text Available Recently, the fractional variational principles as well as their applications yield a special attention. For a fractional variational problem based on different types of fractional integral and derivatives operators, corresponding fractional Lagrangian and Hamiltonian formulation and relevant Euler–Lagrange type equations are already presented by scholars. The formulations of fractional variational principles still can be developed more. We make an attempt to generalize the formulations for fractional variational principles. As a result we obtain generalized and complementary fractional variational formulations for extended exponentially fractional integral for example and corresponding Euler–Lagrange equations. Two illustrative examples are presented. It is observed that the formulations are in exact agreement with the Euler–Lagrange equations.

Variational integrators for electric circuits

International Nuclear Information System (INIS)

Ober-Blöbaum, Sina; Tao, Molei; Cheng, Mulin; Owhadi, Houman; Marsden, Jerrold E.

2013-01-01

In this contribution, we develop a variational integrator for the simulation of (stochastic and multiscale) electric circuits. When considering the dynamics of an electric circuit, one is faced with three special situations: 1. The system involves external (control) forcing through external (controlled) voltage sources and resistors. 2. The system is constrained via the Kirchhoff current (KCL) and voltage laws (KVL). 3. The Lagrangian is degenerate. Based on a geometric setting, an appropriate variational formulation is presented to model the circuit from which the equations of motion are derived. A time-discrete variational formulation provides an iteration scheme for the simulation of the electric circuit. Dependent on the discretization, the intrinsic degeneracy of the system can be canceled for the discrete variational scheme. In this way, a variational integrator is constructed that gains several advantages compared to standard integration tools for circuits; in particular, a comparison to BDF methods (which are usually the method of choice for the simulation of electric circuits) shows that even for simple LCR circuits, a better energy behavior and frequency spectrum preservation can be observed using the developed variational integrator

Thallium isotope variations in an ore-bearing continental igneous setting: Collahuasi Formation, northern Chile

Science.gov (United States)

Baker, R. G. A.; Rehkämper, M.; Ihlenfeld, C.; Oates, C. J.; Coggon, R.

2010-08-01

Thallium is a highly incompatible element and a large fraction of the bulk silicate Earth Tl budget is, therefore, expected to reside in the continental crust. Nonetheless, the Tl isotope systematics of continental rocks are essentially unexplored at present. Here, we present new Tl isotope composition and concentration data for a suite of 36 intrusive and extrusive igneous rocks from the vicinity of porphyry Cu deposits in the Collahuasi Formation of the Central Andes in northern Chile. The igneous lithologies of the rocks are variably affected by the hydrothermal alteration that accompanied the formation of the Cu deposits. The samples display Tl concentrations that vary by more than an order of magnitude, from 0.1 to 3.2 μg/g, whilst ɛ 205Tl ranges between -5.1 and +0.1 (ɛ 205Tl is the deviation of the 205Tl/ 203Tl isotope ratio of a sample from a standard in parts per 10 4). These variations are primarily thought to be a consequence of hydrothermal alteration processes, including metasomatic transport of Tl, and formation/breakdown of Tl-bearing minerals, which are associated with small but significant Tl isotope effects. The Tl abundances show excellent correlations with both K and Rb concentrations but no co-variation with Cu. This demonstrates that Tl displays only limited chalcophile affinity in the continental crust of the Collahuasi Formation, but behaves as a lithophile element with a distribution that is primarily governed by partitioning of Tl + into K +-bearing phases. Collahuasi samples with propylitic alteration features, which are derived from the marginal parts of the hydrothermal systems, have, on average, slightly lighter Tl isotope compositions than rocks from the more central sericitic and argillic alteration zones. This small but statistically significant difference most likely reflects preferential retention of isotopically heavy Tl in alteration phases, such as white micas and clays, which formed during sericitic and argillic alteration.

Unlabelled and radioactive labelled derivatives of butylamino propiophenone and their preparation

International Nuclear Information System (INIS)

Findlay, J.W.A.; Butz, R.F.; Welch, R.M.

1986-01-01

This invention relates to new unlabelled and radioactive labelled derivatives of butylamino propiophenone and their preparation. This invention is primarily directed to a radioimmunoassay for clinical or experimental testing for the presence of and quantitation of bupropion, a pharmacologically active antidepressant compound, in biological fluids

Which plant trait explains the variations in relative growth rate and its response to elevated carbon dioxide concentration among Arabidopsis thaliana ecotypes derived from a variety of habitats?

Science.gov (United States)

Oguchi, Riichi; Ozaki, Hiroshi; Hanada, Kousuke; Hikosaka, Kouki

2016-03-01

Elevated atmospheric carbon dioxide (CO2) concentration ([CO2]) enhances plant growth, but this enhancement varies considerably. It is still uncertain which plant traits are quantitatively related to the variation in plant growth. To identify the traits responsible, we developed a growth analysis model that included primary parameters associated with morphology, nitrogen (N) use, and leaf and root activities. We analysed the vegetative growth of 44 ecotypes of Arabidopsis thaliana L. grown at ambient and elevated [CO2] (800 μmol mol(-1)). The 44 ecotypes were selected such that they were derived from various altitudes and latitudes. Relative growth rate (RGR; growth rate per unit plant mass) and its response to [CO2] varied by 1.5- and 1.7-fold among ecotypes, respectively. The variation in RGR at both [CO2]s was mainly explained by the variation in leaf N productivity (LNP; growth rate per leaf N),which was strongly related to photosynthetic N use efficiency (PNUE). The variation in the response of RGR to [CO2] was also explained by the variation in the response of LNP to [CO2]. Genomic analyses indicated that there was no phylogenetic constraint on inter-ecotype variation in the CO2 response of RGR or LNP. We conclude that the significant variation in plant growth and its response to [CO2] among ecotypes reflects the variation in N use for photosynthesis among ecotypes, and that the response of PNUE to CO2 is an important target for predicting and/or breeding plants that have high growth rates at elevated [CO2].

Environmental controls on δ13C variations of Sphagnum derived n-alkanes in the Dajiuhu peatland, central China

Science.gov (United States)

Huang, X.; Xue, J.; Wang, X.; WANG, H.; Meyers, P. A.; Qin, Y.; Gong, L.; Ding, W.

2012-12-01

Northern peatlands are one of the very important atmospheric carbon sinks and represent about 30% of the global soil organic carbon (Gorham, 1991). In peatland conditions, high water levels and consequent anoxia make them an important source of methane. A recent study revealed that methanotrophic bacteria growing on stems or in hyaline cells of Sphagnum can provide methane derived carbon for photosynthesis (Raghoebarsing et al., 2005). This interaction has been found to be globally prevalent in peat-moss ecosystems and can contribute up to 30% of carbon for Sphagnum photosynthesis (Kip et al., 2010). Due to the uptake of 13C-depleted methane-derived CO2 and the sensitivity of methane oxidizing bacteria to the surface wetness, the carbon isotopic signatures of Sphagnum derived lipids have the potential to be used as a proxy for the surface wetness in peatlands and hence as paleoclimate archives (Nichols et al., 2009). In this study, we report the δ13C variations of the Sphagnum derived n-C23 alkane in both fresh Sphagnum and surface peat samples in the Dajiuhu peatland, a small fen located in the Shennongjia forestry region, Hubei province, central China. The δ13C23 values of Sphagnum show a negative correlation with the water level, supporting the idea that that the carbon isotope fractionation of Sphagnum is mainly manifested by the diffusion resistance of CO2 in hyaline cells of Sphagnum. However, δ13C23 values of surface peats collected in Sphagnum dominated ecosystems display a positive relation with the water level when the water level is less than 30 cm. Such an inconsistency probably results from the higher potential for methane-oxidizing activity in the lower parts of Sphagnum in fen meadows. When the water level is higher than 30 cm, the influence of symbiotic methanotrophic bacteria on Sphagnum derived n-C23 alkane is weak or nearly absent. These findings provide direct evidence to support the hypothesis that the carbon isotopic signatures of Sphagnum

Bounded Densities and Their Derivatives

DEFF Research Database (Denmark)

Kozine, Igor; Krymsky, V.

2009-01-01

This paper describes how one can compute interval-valued statistical measures given limited information about the underlying distribution. The particular focus is on a bounded derivative of a probability density function and its combination with other available statistical evidence for computing ...... quantities of interest. To be able to utilise the evidence about the derivative it is suggested to adapt the ‘conventional’ problem statement to variational calculus and the way to do so is demonstrated. A number of examples are given throughout the paper....

Overtone spectroscopy of some benzaldehyde derivatives

Indian Academy of Sciences (India)

internuclear distances for the aryl CH bond in the different molecules. The small variation observed in these distances is ..... [6] D N Singh, Vibrational spectra and force fields for some benzaldehyde derivatives, Ph.D. Thesis. (Banaras Hindu ...

Amazonian Amphibian Diversity Is Primarily Derived from Late Miocene Andean Lineages

Science.gov (United States)

Santos, Juan C; Coloma, Luis A; Summers, Kyle; Caldwell, Janalee P; Ree, Richard; Cannatella, David C

2009-01-01

The Neotropics contains half of remaining rainforests and Earth's largest reservoir of amphibian biodiversity. However, determinants of Neotropical biodiversity (i.e., vicariance, dispersals, extinctions, and radiations) earlier than the Quaternary are largely unstudied. Using a novel method of ancestral area reconstruction and relaxed Bayesian clock analyses, we reconstructed the biogeography of the poison frog clade (Dendrobatidae). We rejected an Amazonian center-of-origin in favor of a complex connectivity model expanding over the Neotropics. We inferred 14 dispersals into and 18 out of Amazonia to adjacent regions; the Andes were the major source of dispersals into Amazonia. We found three episodes of lineage dispersal with two interleaved periods of vicariant events between South and Central America. During the late Miocene, Amazonian, and Central American-Chocoan lineages significantly increased their diversity compared to the Andean and Guianan-Venezuelan-Brazilian Shield counterparts. Significant percentage of dendrobatid diversity in Amazonia and Chocó resulted from repeated immigrations, with radiations at Venezuelan Highlands, and Guiana Shield have undergone extended in situ diversification at near constant rate since the Oligocene. The effects of Miocene paleogeographic events on Neotropical diversification dynamics provided the framework under which Quaternary patterns of endemism evolved. PMID:19278298

Spatio-temporal variation in soil derived nitrous oxide emissions under sugarcane

International Nuclear Information System (INIS)

Huang, Xiaodong; Grace, Peter; Mengersen, Kerrie; Weier, Keith

2011-01-01

Nitrous oxide (N 2 O) is a significant greenhouse gas with a global warming potential that is 300 times than that of carbon dioxide. Soil derived N 2 O emissions usually display a high degree of spatial and temporal variability because of their dependence on soil chemical and physical properties, and climate dependent environmental factors. However, there is little research that incorporates spatial dependence in the estimation of N 2 O emissions allowing for environmental factors in the same model. This study aims to examine the impact of two environmental factors (soil temperature and soil moisture) on N 2 O emissions and explore the spatial structure of N 2 O in the sub-tropical South East Queensland region of Australia. The replicated data on N 2 O emissions and soil properties were collected at a typical sugarcane land site covering 25 uniform grid points across 3600 m 2 between October 2007 and September 2008. A Bayesian conditional autoregressive (CAR) model was used to model spatial dependence. Results showed that soil moisture and soil temperature appeared to have substantially different effects on N 2 O emissions after taking spatial dependence into account in the four seasons. There was a substantial variation in the spatial distribution of N 2 O emission in the different seasons. The high N 2 O emission regions were accompanied by high uncertainty and changed in varying seasons in this study site. Spatial CAR models might be more plausible to elucidate and account for the uncertainty arising from unclear variables and spatial variability in the assessment of N 2 O emissions in soils, and more accurately identify relationships with key environmental factors and help to reduce the uncertainty of the soil parameters. - Highlights: → Soil moisture and soil temperature have substantially different effects on N 2 O emissions across four seasons of emissions. → High N 2 O emissions were associated with high uncertainty and varied between seasons. �

Human punishment is not primarily motivated by inequality.

Science.gov (United States)

Marczyk, Jesse

2017-01-01

Previous theorizing about punishment has suggested that humans desire to punish inequality per se. However, the research supporting such an interpretation contains important methodological confounds. The main objective of the current experiment was to remove those confounds in order to test whether generating inequality per se is punished. Participants were recruited from an online market to take part in a wealth-alteration game with an ostensible second player. The participants were given an option to deduct from the other player's payment as punishment for their behavior during the game. The results suggest that human punishment does not appear to be motivated by inequality per se, as inequality that was generated without inflicting costs on others was not reliably punished. Instead, punishment seems to respond primarily to the infliction of costs, with inequality only becoming relevant as a secondary input for punishment decisions. The theoretical significance of this finding is discussed in the context of its possible adaptive value.

Human punishment is not primarily motivated by inequality

Science.gov (United States)

Marczyk, Jesse

2017-01-01

Previous theorizing about punishment has suggested that humans desire to punish inequality per se. However, the research supporting such an interpretation contains important methodological confounds. The main objective of the current experiment was to remove those confounds in order to test whether generating inequality per se is punished. Participants were recruited from an online market to take part in a wealth-alteration game with an ostensible second player. The participants were given an option to deduct from the other player’s payment as punishment for their behavior during the game. The results suggest that human punishment does not appear to be motivated by inequality per se, as inequality that was generated without inflicting costs on others was not reliably punished. Instead, punishment seems to respond primarily to the infliction of costs, with inequality only becoming relevant as a secondary input for punishment decisions. The theoretical significance of this finding is discussed in the context of its possible adaptive value. PMID:28187166

Human punishment is not primarily motivated by inequality.

Directory of Open Access Journals (Sweden)

Jesse Marczyk

Full Text Available Previous theorizing about punishment has suggested that humans desire to punish inequality per se. However, the research supporting such an interpretation contains important methodological confounds. The main objective of the current experiment was to remove those confounds in order to test whether generating inequality per se is punished. Participants were recruited from an online market to take part in a wealth-alteration game with an ostensible second player. The participants were given an option to deduct from the other player's payment as punishment for their behavior during the game. The results suggest that human punishment does not appear to be motivated by inequality per se, as inequality that was generated without inflicting costs on others was not reliably punished. Instead, punishment seems to respond primarily to the infliction of costs, with inequality only becoming relevant as a secondary input for punishment decisions. The theoretical significance of this finding is discussed in the context of its possible adaptive value.

Local Fractional Laplace Variational Iteration Method for Solving Linear Partial Differential Equations with Local Fractional Derivative

Directory of Open Access Journals (Sweden)

Ai-Min Yang

2014-01-01

Full Text Available The local fractional Laplace variational iteration method was applied to solve the linear local fractional partial differential equations. The local fractional Laplace variational iteration method is coupled by the local fractional variational iteration method and Laplace transform. The nondifferentiable approximate solutions are obtained and their graphs are also shown.

L∞ Variational Problems with Running Costs and Constraints

International Nuclear Information System (INIS)

Aronsson, G.; Barron, E. N.

2012-01-01

Various approaches are used to derive the Aronsson–Euler equations for L ∞ calculus of variations problems with constraints. The problems considered involve holonomic, nonholonomic, isoperimetric, and isosupremic constraints on the minimizer. In addition, we derive the Aronsson–Euler equation for the basic L ∞ problem with a running cost and then consider properties of an absolute minimizer. Many open problems are introduced for further study.

Biological variation of total prostate-specific antigen

DEFF Research Database (Denmark)

Söletormos, Georg; Semjonow, Axel; Sibley, Paul E C

2005-01-01

BACKGROUND: The objectives of this study were to determine whether a single result for total prostate-specific antigen (tPSA) can be used confidently to guide the need for prostate biopsy and by how much serial tPSA measurements must differ to be significant. tPSA measurements include both...... analytical and biological components of variation. The European Group on Tumor Markers conducted a literature survey to determine both the magnitude and impact of biological variation on single, the mean of replicate, and serial tPSA measurements. METHODS: The survey yielded 27 studies addressing the topic......, and estimates for the biological variation of tPSA could be derived from 12 of these studies. RESULTS: The mean biological variation was 20% in the concentration range 0.1-20 microg/L for men over 50 years. The biological variation means that the one-sided 95% confidence interval (CI) of the dispersion...

Satellite-derived surface and sub-surface water storage in the Ganges–Brahmaputra River Basin

Directory of Open Access Journals (Sweden)

Fabrice Papa

2015-09-01

New hydrological insights: Basin-scale monthly SWS variations for the period 2003–2007 show a mean annual amplitude of ∼410 km3, contributing to about 45% of the Gravity Recovery And Climate Experiment (GRACE-derived total water storage variations (TWS. During the drought-like conditions in 2006, we estimate that the SWS deficit over the entire GB basin in July–August–September was about 30% as compared to other years. The SWS variations are then used to decompose the GB GRACE-derived TWS and isolate the variations of SSWS whose mean annual amplitude is estimated to be ∼550 km3. This new dataset of water storage variations represent an unprecedented source of information for hydrological and climate modeling studies of the ISC.

Heritable variation in maternally derived yolk androgens, thyroid hormones and immune factors

NARCIS (Netherlands)

Ruuskanen, S; Gienapp, P; Groothuis, T G G; Schaper, S V; Darras, V M; Pereira, C.; Vries, de Bonnie; Visser, Marcel

2016-01-01

Maternal reproductive investment can critically influence offspring phenotype, and thus these maternal effects are expected to be under strong natural selection. Knowledge on the extent of heritable variation in the physiological mechanisms underlying maternal effects is however limited. In birds,

The four variational principles of mechanics

International Nuclear Information System (INIS)

Gray, C.G.; Karl, G.; Novikov, V.A.

1996-01-01

We argue that there are four basic forms of the variational principles of mechanics: Hamilton close-quote s least action principle (HP), the generalized Maupertuis principle (MP), and their two reciprocal principles, RHP and RMP. This set is invariant under reciprocity and Legendre transformations. One of these forms (HP) is in the literature: only special cases of the other three are known. The generalized MP has a weaker constraint compared to the traditional formulation, only the mean energy bar E is kept fixed between virtual paths. This reformulation of MP alleviates several weaknesses of the old version. The reciprocal Maupertuis principle (RMP) is the classical limit of Schroedinger close-quote s variational principle of quantum mechanics, and this connection emphasizes the importance of the reciprocity transformation for variational principles. Two unconstrained formulations (UHP and UMP) of these four principles are also proposed, with completely specified Lagrange multipliers Percival close-quote s variational principle for invariant tori and variational principles for scattering orbits are derived from the RMP. The RMP is very convenient for approximate variational solutions to problems in mechanics using Ritz type methods Examples are provided. Copyright copyright 1996 Academic Press, Inc

Quasi-static responses and variational principles in gradient plasticity

Science.gov (United States)

Nguyen, Quoc-Son

2016-12-01

Gradient models have been much discussed in the literature for the study of time-dependent or time-independent processes such as visco-plasticity, plasticity and damage. This paper is devoted to the theory of Standard Gradient Plasticity at small strain. A general and consistent mathematical description available for common time-independent behaviours is presented. Our attention is focussed on the derivation of general results such as the description of the governing equations for the global response and the derivation of related variational principles in terms of the energy and the dissipation potentials. It is shown that the quasi-static response under a loading path is a solution of an evolution variational inequality as in classical plasticity. The rate problem and the rate minimum principle are revisited. A time-discretization by the implicit scheme of the evolution equation leads to the increment problem. An increment of the response associated with a load increment is a solution of a variational inequality and satisfies also a minimum principle if the energy potential is convex. The increment minimum principle deals with stables solutions of the variational inequality. Some numerical methods are discussed in view of the numerical simulation of the quasi-static response.

Mixed Higher Order Variational Model for Image Recovery

Directory of Open Access Journals (Sweden)

Pengfei Liu

2014-01-01

Full Text Available A novel mixed higher order regularizer involving the first and second degree image derivatives is proposed in this paper. Using spectral decomposition, we reformulate the new regularizer as a weighted L1-L2 mixed norm of image derivatives. Due to the equivalent formulation of the proposed regularizer, an efficient fast projected gradient algorithm combined with monotone fast iterative shrinkage thresholding, called, FPG-MFISTA, is designed to solve the resulting variational image recovery problems under majorization-minimization framework. Finally, we demonstrate the effectiveness of the proposed regularization scheme by the experimental comparisons with total variation (TV scheme, nonlocal TV scheme, and current second degree methods. Specifically, the proposed approach achieves better results than related state-of-the-art methods in terms of peak signal to ratio (PSNR and restoration quality.

Uniform Variation in Genetic-Traits of a Marine Bivalve Related to Starvation, Pollution and Geographic Clines

NARCIS (Netherlands)

Hummel, H.; Bogaards, R.H.; Amiard-Triquet, C.; Bachelet, G.; Desprez, M.; Marchand, J.; Rybarczyk, H.; Sylvand, B.; De Wit, Y.; De Wolf, L.

1995-01-01

Consistent patterns of genetic variation in the marine bivalve Macoma balthica (L.) were found after exposure to low levels of copper, starvation, and along geographic dines. The geographic dines were related to temperature and salinity. Genetic differences were primarily found in the LAP (Leucine

Variational coupling between q-number and c-number dynamics

International Nuclear Information System (INIS)

Amaral, C.M. do; Joffily, S.

1984-01-01

The time-dependent quantum variational principle is generalized for the case of hamiltonian operators having real parameters and their time derivates. The obtained variational system is formed by a Schroedinger equation coupled to a Lagrange equation system, where the lagrangian is the average value of the parametrized hamiltonian operator. The consequent dynamics of the variational principle, describes the interaction between a q-number sub-dynamics with a c-number sub-dynamics. In the ((h/2π)) 0 -order W.K.B. approximation, the variational system reduces to a Hamilton-Jacobi-like equation, coupled to a Lagrange equation family. The formal features of the obtained variational system are appropriated for the description of, adiabatics and non-adiabatics, time-dependent q-number c-number interactions. (L.C.) [pt

Coarse Grained Exponential Variational Autoencoders

KAUST Repository

Sun, Ke

2017-02-25

Variational autoencoders (VAE) often use Gaussian or category distribution to model the inference process. This puts a limit on variational learning because this simplified assumption does not match the true posterior distribution, which is usually much more sophisticated. To break this limitation and apply arbitrary parametric distribution during inference, this paper derives a \\\\emph{semi-continuous} latent representation, which approximates a continuous density up to a prescribed precision, and is much easier to analyze than its continuous counterpart because it is fundamentally discrete. We showcase the proposition by applying polynomial exponential family distributions as the posterior, which are universal probability density function generators. Our experimental results show consistent improvements over commonly used VAE models.

Genetic basis for natural variation in seed vitamin E levels in Arabidopsis thaliana

NARCIS (Netherlands)

Gilliland, L.U.; Magallanes-Lundback, M.; Hemming, C.; Suppllee, A.; Koornneef, M.; Bentsink, L.; DellaPenna, D.

2006-01-01

Vitamin E is an essential nutrient for humans and is obtained primarily from food, especially oil, derived from the seed of plants. Genes encoding the committed steps in vitamin E synthesis in plants (VTE, loci 1-5) have been isolated and used for tocopherol pathway engineering with various degrees

Solar cycle variations in mesospheric carbon monoxide

Science.gov (United States)

Lee, Jae N.; Wu, Dong L.; Ruzmaikin, Alexander; Fontenla, Juan

2018-05-01

As an extension of Lee et al. (2013), solar cycle variation of carbon monoxide (CO) is analyzed with MLS observation, which covers more than thirteen years (2004-2017) including maximum of solar cycle 24. Being produced primarily by the carbon dioxide (CO2) photolysis in the lower thermosphere, the variations of the mesospheric CO concentration are largely driven by the solar cycle modulated ultraviolet (UV) variation. This solar signal extends down to the lower altitudes by the dynamical descent in the winter polar vortex, showing a time lag that is consistent with the average descent velocity. To characterize a global distribution of the solar impact, MLS CO is correlated with the SORCE measured total solar irradiance (TSI) and UV. As high as 0.8 in most of the polar mesosphere, the linear correlation coefficients between CO and UV/TSI are more robust than those found in the previous work. The photochemical contribution explains most (68%) of the total variance of CO while the dynamical contribution accounts for 21% of the total variance at upper mesosphere. The photochemistry driven CO anomaly signal is extended in the tropics by vertical mixing. The solar cycle signal in CO is further examined with the Whole Atmosphere Community Climate Model (WACCM) 3.5 simulation by implementing two different modeled Spectral Solar Irradiances (SSIs): SRPM 2012 and NRLSSI. The model simulations underestimate the mean CO amount and solar cycle variations of CO, by a factor of 3, compared to those obtained from MLS observation. Different inputs of the solar spectrum have small impacts on CO variation.

morphological characteristics and classification of soils derived

African Journals Online (AJOL)

Prof. Ekwueme

MORPHOLOGICAL CHARACTERISTICS AND CLASSIFICATION OF. SOILS DERIVED FROM DIVERSE PARENT MATERIALS IN CENTRAL. CROSS RIVER STATE, NIGERIA. 271. M. E. NSOR and I. J. IBANGA. (Received 5 October 2007; Revision Accepted 5 December 2007). ABSTRACT. Variation in soil characteristics ...

Temporal variation and provenance of thorium deposition observed at Tsukuba, Japan

International Nuclear Information System (INIS)

Hirose, Katsumi; Kikawada, Yoshikazu; Igarashi, Yasuhito

2012-01-01

Temporal variations of monthly thorium (Th) deposition observed at Tsukuba, Japan during the period 1990–2007, comparing with plutonium deposition, was studied. The monthly 232 Th deposition as did 239,240 Pu, varied according to season and inter-annually. In particular, 232 Th deposition increased significantly in spring coinciding with Asian dust (Kosa) events. The 230 Th/ 232 Th activity ratios vary according to sources and can therefore be used to differentiate between locally derived and remotely derived 232 Th. The 230 Th/ 232 Th activity ratios in deposition samples showed large variability with high ratios occurring in early spring. These high 230 Th/ 232 Th ratios in deposition can be attributed to local dust storms, especially in early spring, that cause resuspension of soils from cultivated fields which are characterized by high 230 Th/ 232 Th activity ratios. The results reveal that both locally and remotely derived 232 Th deposition showed seasonal variations with maxima in spring, although the remotely derived fraction is dominant rather than the locally derived one. The 232 Th deposition maxima later in spring is attributable to the remotely derived fraction, corresponding to the Kosa events. Annual 232 Th deposition exhibited an increasing trend, suggesting the presence of sources other than soil dust such as fly ash from increasing coal burning. - Highlights: ► We show monthly Th deposition observed at Tsukuba, Japan from 1990 to 2007. ► The Th deposition shows a seasonal variation and inter-annual variability. ► Th isotope ratios ( 230 Th/ 232 Th) are used to identify its sources. ► The long-term trend of Th deposition is related to increasing anthropogenic input.

Evaluation of snow cover and snow depth on the Qinghai–Tibetan Plateau derived from passive microwave remote sensing

Directory of Open Access Journals (Sweden)

L. Dai

2017-08-01

Full Text Available Snow cover on the Qinghai–Tibetan Plateau (QTP plays a significant role in the global climate system and is an important water resource for rivers in the high-elevation region of Asia. At present, passive microwave (PMW remote sensing data are the only efficient way to monitor temporal and spatial variations in snow depth at large scale. However, existing snow depth products show the largest uncertainties across the QTP. In this study, MODIS fractional snow cover product, point, line and intense sampling data are synthesized to evaluate the accuracy of snow cover and snow depth derived from PMW remote sensing data and to analyze the possible causes of uncertainties. The results show that the accuracy of snow cover extents varies spatially and depends on the fraction of snow cover. Based on the assumption that grids with MODIS snow cover fraction > 10 % are regarded as snow cover, the overall accuracy in snow cover is 66.7 %, overestimation error is 56.1 %, underestimation error is 21.1 %, commission error is 27.6 % and omission error is 47.4 %. The commission and overestimation errors of snow cover primarily occur in the northwest and southeast areas with low ground temperature. Omission error primarily occurs in cold desert areas with shallow snow, and underestimation error mainly occurs in glacier and lake areas. With the increase of snow cover fraction, the overestimation error decreases and the omission error increases. A comparison between snow depths measured in field experiments, measured at meteorological stations and estimated across the QTP shows that agreement between observation and retrieval improves with an increasing number of observation points in a PMW grid. The misclassification and errors between observed and retrieved snow depth are associated with the relatively coarse resolution of PMW remote sensing, ground temperature, snow characteristics and topography. To accurately understand the variation in snow

Derivation of GPS TEC and receiver bias for Langkawi station in Malaysia

International Nuclear Information System (INIS)

Teh, W L; Abdullah, M; Chen, W S

2017-01-01

This paper presents the polynomial-type TEC model to derive total electron content (TEC) and receiver bias for Langkawi (LGKW) station in Malaysia at geographic latitude of 6.32° and longitude of 99.85°. The model uses a polynomial function of coordinates of the ionospheric piercing point to describe the TEC distribution in space. In the model, six polynomial coefficients and a receiver bias are unknown which can be solved by the least squares method. A reasonable agreement is achieved for the derivation of TEC and receiver bias for IENG station in Italy, as compared with that derived by the IGS analysis center, CODE. We process one year of LGKW data in 2010 and show the monthly receiver bias and the seasonal TEC variation. The monthly receiver bias varies between −48 and −24 TECu (10 16 electrons/m 2 ), with the mean value at −37 TECu. Large variations happen in the monthly receiver biases due to the low data coverage of high satellite elevation angle (60° < α ≤ 90°). Post-processing TEC approach is implemented which can resolve the wavy pattern of the monthly TEC baseline resulted from the large variation of the receiver bias. The seasonal TEC variation at LGKW exhibits a semi-annual variation, where the peak occurs during equinoctial months, and the trough during summer and winter months. (paper)

Variational integrators in plasma physics

International Nuclear Information System (INIS)

Kraus, Michael

2013-01-01

To a large extent, research in plasma physics is concerned with the description and analysis of energy and momentum transfer between different scales and different kinds of waves. In the numerical modelling of such phenomena it appears to be crucial to describe the transfer processes preserving the underlying conservation laws in order to prevent physically spurious solutions. In this work, special numerical methods, so called variational integrators, are developed for several models of plasma physics. Special attention is given to conservation properties like conservation of energy and momentum. By design, variational integrators are applicable to all systems that have a Lagrangian formulation. Usually, equations of motion are derived by Hamilton's action principle and then discretised. In the application of the variational integrator theory, the order of these steps is reversed. At first, the Lagrangian and the accompanying variational principle are discretised, such that discrete equations of motion can be obtained directly by applying the discrete variational principle to the discrete Lagrangian. The advantage of this approach is that the resulting discretisation automatically retains the conservation properties of the continuous system. Following an overview of the geometric formulation of classical mechanics and field theory, which forms the basis of the variational integrator theory, variational integrators are introduced in a framework adapted to problems from plasma physics. The applicability of variational integrators is explored for several important models of plasma physics: particle dynamics (guiding centre dynamics), kinetic theory (the Vlasov-Poisson system) and fluid theory (magnetohydrodynamics). These systems, with the exception of guiding centre dynamics, do not possess a Lagrangian formulation to which the variational integrator methodology is directly applicable. Therefore the theory is extended by linking it to Ibragimov's theory of

Does quality control matter? Surface urban heat island intensity variations estimated by satellite-derived land surface temperature products

Science.gov (United States)

Lai, Jiameng; Zhan, Wenfeng; Huang, Fan; Quan, Jinling; Hu, Leiqiu; Gao, Lun; Ju, Weimin

2018-05-01

The temporally regular and spatially comprehensive monitoring of surface urban heat islands (SUHIs) have been extremely difficult, until the advent of satellite-based land surface temperature (LST) products. However, these LST products have relatively higher errors compared to in situ measurements. This has resulted in comparatively inaccurate estimations of SUHI indicators and, consequently, may have distorted interpretations of SUHIs. Although reports have shown that LST qualities are important for SUHI interpretations, systematic investigations of the response of SUHI indicators to LST qualities across cities with dissimilar bioclimates are rare. To address this issue, we chose eighty-six major cities across mainland China and analyzed SUHI intensity (SUHII) derived from Moderate Resolution Imaging Spectroradiometer (MODIS) LST data. The LST-based SUHII differences due to inclusion or exclusion of MODIS quality control (QC) flags (i.e., ΔSUHII) were evaluated. Our major findings included, but are not limited to, the following four aspects: (1) SUHIIs can be significantly impacted by MODIS QC flags, and the associated QC-induced ΔSUHIIs generally accounted for 24.3% (29.9%) of the total SUHII value during the day (night); (2) the ΔSUHIIs differed between seasons, with considerable differences between transitional (spring and autumn) and extreme (summer and winter) seasons; (3) significant discrepancies also appeared among cities located in northern and southern regions, with northern cities often possessing higher annual mean ΔSUHIIs. The internal variations of ΔSUHIIs within individual cities also showed high heterogeneity, with ΔSUHII variations that generally exceeded 5.0 K (3.0 K) in northern (southern) cities; (4) ΔSUHIIs were negatively related to SUHIIs and cloud cover percentages (mostly in transitional seasons). No significant relationship was found in the extreme seasons. Our findings highlight the need to be extremely cautious when using LST

The uniqueness of the solution for the definite problem of a parabolic variational inequality

Directory of Open Access Journals (Sweden)

Liping Song

2016-12-01

Full Text Available Abstract The uniqueness of the solution for the definite problem of a parabolic variational inequality is proved. The problem comes from the study of the optimal exercise strategies for the perpetual executive stock options with unrestricted exercise in financial market. Because the variational inequality is degenerate and the obstacle condition contains the partial derivative of an unknown function, it makes the theoretical study of the definite problem of the variational inequality problem very difficult. Firstly, the property which the value function satisfies is derived by applying the Jensen inequality. Then the uniqueness of the solution is proved by using this property and maximum principles.

Dynamics of Gaussian Wigner functions derived from a time-dependent variational principle

Directory of Open Access Journals (Sweden)

Jens Aage Poulsen

2017-11-01

Full Text Available By using a time-dependent variational principle formulated for Wigner phase-space functions, we obtain the optimal time-evolution for two classes of Gaussian Wigner functions, namely those of either thawed real-valued or frozen but complex Gaussians. It is shown that tunneling effects are approximately included in both schemes.

Multistep Hybrid Extragradient Method for Triple Hierarchical Variational Inequalities

Directory of Open Access Journals (Sweden)

Zhao-Rong Kong

2013-01-01

Full Text Available We consider a triple hierarchical variational inequality problem (THVIP, that is, a variational inequality problem defined over the set of solutions of another variational inequality problem which is defined over the intersection of the fixed point set of a strict pseudocontractive mapping and the solution set of the classical variational inequality problem. Moreover, we propose a multistep hybrid extragradient method to compute the approximate solutions of the THVIP and present the convergence analysis of the sequence generated by the proposed method. We also derive a solution method for solving a system of hierarchical variational inequalities (SHVI, that is, a system of variational inequalities defined over the intersection of the fixed point set of a strict pseudocontractive mapping and the solution set of the classical variational inequality problem. Under very mild conditions, it is proven that the sequence generated by the proposed method converges strongly to a unique solution of the SHVI.

Finanční deriváty v České republice a ve světě

OpenAIRE

Petrov, Ondřej

2011-01-01

This thesis deals with the financial derivatives and trading in the world and the Czech Republic. The introductory part defines the basic concepts associated with financial derivatives, describes their types and method of statistical reporting. Briefly outlines the basic types of derivatives and their history. The second part evaluates the derivatives trading on Exchange and OTC markets. It is primarily focused on the latest development during the financial crisis. The third part examines mor...

Elevated levels of plasma brain derived neurotrophic factor in rapid cycling bipolar disorder patients

DEFF Research Database (Denmark)

Munkholm, Klaus; Pedersen, Bente Klarlund; Kessing, Lars Vedel

2014-01-01

Impaired neuroplasticity may be implicated in the pathophysiology of bipolar disorder, involving peripheral alterations of the neurotrophins brain derived neurotrophic factor (BDNF) and neurotrophin 3 (NT-3). Evidence is limited by methodological issues and is based primarily on case-control desi......Impaired neuroplasticity may be implicated in the pathophysiology of bipolar disorder, involving peripheral alterations of the neurotrophins brain derived neurotrophic factor (BDNF) and neurotrophin 3 (NT-3). Evidence is limited by methodological issues and is based primarily on case......-control designs. The aim of this study was to investigate whether BDNF and NT-3 levels differ between patients with rapid cycling bipolar disorder and healthy control subjects and whether BDNF and NT-3 levels alter with affective states in rapid cycling bipolar disorder patients. Plasma levels of BDNF and NT-3......, levels of BDNF were significantly elevated in bipolar disorder patients in euthymic- (pdifference in BDNF levels...

Tumor response parameters for head and neck cancer derived from tumor-volume variation during radiation therapy

International Nuclear Information System (INIS)

Chvetsov, Alexei V.

2013-01-01

Purpose: The main goal of this paper is to reconstruct a distribution of cell survival fractions from tumor-volume variation for a heterogeneous group of head and neck cancer patients and compare this distribution to the data from predictive assays. Methods: To characterize the tumor-volume variation during radiation therapy treatment, the authors use a two-level tumor-volume model of cell population that separates the entire tumor cell population into two subpopulations of viable cells and lethally damaged cells. This parameterized radiobiological model is integrated with a least squares objective function and a simulated annealing optimization algorithm to describe time-dependent tumor-volume variation rates in individual patients. Several constraints have been used in the optimization problem because tumor-volume variation during radiotherapy is described by a sum of exponentials; therefore, the problem of accurately fitting a model to measured data is ill-posed. The model was applied to measured tumor-volume variation curves from a clinical study on tumor-volume variation during radiotherapy for 14 head and neck cancer patients in which an integrated CT/linear particle accelerator (LINAC) system was used for tumor-volume measurements. Results: The two-level cell population tumor-volume modeling is capable of describing tumor-volume variation throughout the entire treatment for 11 of the 14 patients. For three patients, the tumor-volume variation was described only during the initial part of treatment, a fact that may be related to the neglected hypoxia in the two-level approximation. The predicted probability density distribution for the survival fractions agrees with the data obtained using in vitro studies with predictive assays. The mean value 0.35 of survival fraction obtained in this study is larger than the value 0.32 from in vitro studies, which could be expected because of greater repair in vivo. The mean half-life obtained in this study for the head

Variational characterization of generalized Jacobi equations

International Nuclear Information System (INIS)

Casciaro, B.

1995-09-01

A Lagrangian depending on derivatives of the fields up to a generic order is considered, together with a series development around a given section. The problem of extremality and stability of action for this system is then addressed. Higher-order variations in the Lagrangian, the Euler-Lagrange equation, the expansion of the action, the D-invariant decomposition of the Lagrangian, the Jacobi equation, and a unified description of the Euler-Lag range and Jacobi equations are discussed. As a conclusion of the work it is stated that the theory of second variations is worthy to be revisited and a comment on a recent paper by Taub is made. 10 refs

A variational principle for the axisymmetric stability of rotating relativistic stars

International Nuclear Information System (INIS)

Prabhu, Kartik; Wald, Robert M; Schiffrin, Joshua S

2016-01-01

It is well known that all rotating perfect fluid stars in general relativity are unstable to certain non-axisymmetric perturbations via the Chandrasekhar–Friedman–Schutz (CFS) instability. However, the mechanism of the CFS instability requires, in an essential way, the loss of angular momentum by gravitational radiation and, in many instances, it acts on too long a timescale to be physically/astrophysically relevant. It is therefore of interest to examine the stability of rotating, relativistic stars to axisymmetric perturbations, where the CFS instability does not occur. In this paper, we provide a Rayleigh–Ritz-type variational principle for testing the stability of perfect fluid stars to axisymmetric perturbations, which generalizes to axisymmetric perturbations of rotating stars a variational principle given by Chandrasekhar for spherical perturbations of static, spherical stars. Our variational principle provides a lower bound to the rate of exponential growth in the case of instability. The derivation closely parallels the derivation of a recently obtained variational principle for analyzing the axisymmetric stability of black holes. (paper)

Positive-definite matrix processes of finite variation

DEFF Research Database (Denmark)

Barndorff-Nielsen, Ole Eiler; Stelzer, Robert

2007-01-01

Processes of finite variation, which take values in the positive semidefinite matrices and are representable as the sum of an integral with respect to time and one with respect to an extended Poisson random measure, are considered. For such processes we derive conditions for the square root (and ...

Positive-Definite Matrix Processes of Finite Variation

DEFF Research Database (Denmark)

Barndorff-Nielsen, Ole Eiler; Stelzer, Robert

Processes of finite variation, which take values in the positive semidefinite matrices and are representable as the sum of an integral with respect to time and one with respect to an extended Poisson random measure, are considered. For such processes we derive conditions for the square root (and ...

Variation of Natural Gamma Radiation in Isparta

International Nuclear Information System (INIS)

Akkurt, I.

2004-01-01

There is always a radiation in the earth, and its level is generated primarily by galactic cosmic rays (GCR), consisting of energetic nuclei of all naturally occurring elements, interacting with atmospheric constituents, through atomic and nuclear collisions. The other sources of natural radiations are global average background radiation from terrestrial sources such as soils, rocks ete. Background radiation levels in the atmosphere vary in intensity with latitude, altitude and phase of the solar cycle. Variation of natural radiation as a function of altitude, geological structure etc has been investigated. The measurements were performed using portable radiation counter which connected to NaI(Tl) probe

Longitudinal variability in Jupiter's zonal winds derived from multi-wavelength HST observations

Science.gov (United States)

Johnson, Perianne E.; Morales-Juberías, Raúl; Simon, Amy; Gaulme, Patrick; Wong, Michael H.; Cosentino, Richard G.

2018-06-01

Multi-wavelength Hubble Space Telescope (HST) images of Jupiter from the Outer Planets Atmospheres Legacy (OPAL) and Wide Field Coverage for Juno (WFCJ) programs in 2015, 2016, and 2017 are used to derive wind profiles as a function of latitude and longitude. Wind profiles are typically zonally averaged to reduce measurement uncertainties. However, doing this destroys any variations of the zonal-component of winds in the longitudinal direction. Here, we present the results derived from using a "sliding-window" correlation method. This method adds longitudinal specificity, and allows for the detection of spatial variations in the zonal winds. Spatial variations are identified in two jets: 1 at 17 ° N, the location of a prominent westward jet, and the other at 7 ° S, the location of the chevrons. Temporal and spatial variations at the 24°N jet and the 5-μm hot spots are also examined.

UBV light variation and orbital elements of W Gruis

International Nuclear Information System (INIS)

Cerruti, M.A.

1987-01-01

In each of the UBV band-passes 2440 observations define for the first time the photoelectric light variation of the binary system W Gru. A consistent set of elements is derived in the framework of Russell's classic and Napier's synthesis models. Absolute dimensions are derived. The system seems to be a well-detached binary consisting of two normal, not interacting, F5 4 components. 18 refs., 2 figs., 3 tabs. (author)

Next-Generation Sequencing-Based Detection of Germline Copy Number Variations in BRCA1/BRCA2

DEFF Research Database (Denmark)

Schmidt, Ane Y; Hansen, Thomas V O; Ahlborn, Lise B

2017-01-01

Genetic testing of BRCA1/2 includes screening for single nucleotide variants and small insertions/deletions and for larger copy number variations (CNVs), primarily by Sanger sequencing and multiplex ligation-dependent probe amplification (MLPA). With the advent of next-generation sequencing (NGS)...

Digital database architecture and delineation methodology for deriving drainage basins, and a comparison of digitally and non-digitally derived numeric drainage areas

Science.gov (United States)

Dupree, Jean A.; Crowfoot, Richard M.

2012-01-01

The drainage basin is a fundamental hydrologic entity used for studies of surface-water resources and during planning of water-related projects. Numeric drainage areas published by the U.S. Geological Survey water science centers in Annual Water Data Reports and on the National Water Information Systems (NWIS) Web site are still primarily derived from hard-copy sources and by manual delineation of polygonal basin areas on paper topographic map sheets. To expedite numeric drainage area determinations, the Colorado Water Science Center developed a digital database structure and a delineation methodology based on the hydrologic unit boundaries in the National Watershed Boundary Dataset. This report describes the digital database architecture and delineation methodology and also presents the results of a comparison of the numeric drainage areas derived using this digital methodology with those derived using traditional, non-digital methods. (Please see report for full Abstract)

EURRECA—Principles and Future for Deriving Micronutrient Recommendations

NARCIS (Netherlands)

Claessens, M.; Contor, L.; Dhonukshe-Rutten, R.; Groot, L.C.P.Q.M. de; Fairweather-Tait, S.J.; Gurinovic, M.; Koletzko, B.; Ommen, B. van; Raats, M.M.; Veer, P. van 't

2013-01-01

The EURopean micronutrient RECommendations Aligned (EURRECA) Network of Excellence (NoE) explored an approach for settingmicronutrient recommendations, which would address the variation in recommendations across Europe. Therefore, a framework for deriving and using micronutrient Dietary Reference

Flight biomechanics of developmentally-induced size variation in the solitary bee Osmia lignaria

Science.gov (United States)

Body size covaries with morphology, functional performance, and fitness. For insects, variation in adult phenotypies are derived from developmental variation in larval growth and metamorphosis. In this study, we asked how larval growth impacted adult morphology in Osmia lignaria—especially traits th...

Variation in primary and culture-expanded cells derived from connective tissue progenitors in human bone marrow space, bone trabecular surface and adipose tissue.

Science.gov (United States)

Qadan, Maha A; Piuzzi, Nicolas S; Boehm, Cynthia; Bova, Wesley; Moos, Malcolm; Midura, Ronald J; Hascall, Vincent C; Malcuit, Christopher; Muschler, George F

2018-03-01

Connective tissue progenitors (CTPs) embody the heterogeneous stem and progenitor cell populations present in native tissue. CTPs are essential to the formation and remodeling of connective tissue and represent key targets for tissue-engineering and cell-based therapies. To better understand and characterize CTPs, we aimed to compare the (i) concentration and prevalence, (ii) early in vitro biological behavior and (iii) expression of surface-markers and transcription factors among cells derived from marrow space (MS), trabecular surface (TS), and adipose tissues (AT). Cancellous-bone and subcutaneous-adipose tissues were collected from 8 patients. Cells were isolated and cultured. Colony formation was assayed using Colonyze software based on ASTM standards. Cell concentration ([Cell]), CTP concentration ([CTP]) and CTP prevalence (P CTP ) were determined. Attributes of culture-expanded cells were compared based on (i) effective proliferation rate and (ii) expression of surface-markers CD73, CD90, CD105, SSEA-4, SSEA-3, SSEA-1/CD15, Cripto-1, E-Cadherin/CD324, Ep-CAM/CD326, CD146, hyaluronan and transcription factors Oct3/4, Sox-2 and Nanog using flow cytometry. Mean [Cell], [CTP] and P CTP were significantly different between MS and TS samples (P = 0.03, P = 0.008 and P= 0.0003), respectively. AT-derived cells generated the highest mean total cell yield at day 6 of culture-4-fold greater than TS and more than 40-fold greater than MS per million cells plated. TS colonies grew with higher mean density than MS colonies (290 ± 11 versus 150 ± 11 cell per mm 2 ; P = 0.0002). Expression of classical-mesenchymal stromal cell (MSC) markers was consistently recorded (>95%) from all tissue sources, whereas all the other markers were highly variable. The prevalence and biological potential of CTPs are different between patients and tissue sources and lack variation in classical MSC markers. Other markers are more likely to discriminate differences

Gastric cancer-derived exosomes promote peritoneal metastasis by destroying the mesothelial barrier.

Science.gov (United States)

Deng, Guang; Qu, Jinglei; Zhang, Ye; Che, Xiaofang; Cheng, Yu; Fan, Yibo; Zhang, Simeng; Na, Di; Liu, Yunpeng; Qu, Xiujuan

2017-07-01

An intact mesothelium serves as a protective barrier to inhibit peritoneal carcinomatosis. Cancer-derived exosomes can mediate directional tumor metastasis; however, little is known about whether gastric cancer-derived exosomes will destroy the mesothelial barrier and promote peritoneal dissemination. Here, we demonstrate that gastric cancer-derived exosomes facilitate peritoneal metastasis by causing mesothelial barrier disruption and peritoneal fibrosis. Injury of peritoneal mesothelial cells elicited by gastric cancer-derived exosomes is through concurrent apoptosis and mesothelial-to-mesenchymal transition (MMT). Additionally, upregulation of p-ERK in peritoneal mesothelial cells is primarily responsible for the MMT while contributing little to apoptosis. Together, these data support the concept that exosomes play a crucial role in remodeling the premetastatic microenvironment and identify a novel mechanism for peritoneal metastasis of gastric carcinoma. © 2017 Federation of European Biochemical Societies.

Use of a probabilistic PBPK/PD model to calculate Data Derived Extrapolation Factors for chlorpyrifos.

Science.gov (United States)

Poet, Torka S; Timchalk, Charles; Bartels, Michael J; Smith, Jordan N; McDougal, Robin; Juberg, Daland R; Price, Paul S

2017-06-01

A physiologically based pharmacokinetic and pharmacodynamic (PBPK/PD) model combined with Monte Carlo analysis of inter-individual variation was used to assess the effects of the insecticide, chlorpyrifos and its active metabolite, chlorpyrifos oxon in humans. The PBPK/PD model has previously been validated and used to describe physiological changes in typical individuals as they grow from birth to adulthood. This model was updated to include physiological and metabolic changes that occur with pregnancy. The model was then used to assess the impact of inter-individual variability in physiology and biochemistry on predictions of internal dose metrics and quantitatively assess the impact of major sources of parameter uncertainty and biological diversity on the pharmacodynamics of red blood cell acetylcholinesterase inhibition. These metrics were determined in potentially sensitive populations of infants, adult women, pregnant women, and a combined population of adult men and women. The parameters primarily responsible for inter-individual variation in RBC acetylcholinesterase inhibition were related to metabolic clearance of CPF and CPF-oxon. Data Derived Extrapolation Factors that address intra-species physiology and biochemistry to replace uncertainty factors with quantitative differences in metrics were developed in these same populations. The DDEFs were less than 4 for all populations. These data and modeling approach will be useful in ongoing and future human health risk assessments for CPF and could be used for other chemicals with potential human exposure. Copyright © 2017 Elsevier Inc. All rights reserved.

RNA-Seq analysis uncovers transcriptomic variations between morphologically similar in vivo- and in vitro-derived bovine blastocysts

Directory of Open Access Journals (Sweden)

Driver Ashley M

2012-03-01

Full Text Available Abstract Background A valuable tool for both research and industry, in vitro fertilization (IVF has applications range from gamete selection and preservation of traits to cloning. Although IVF has achieved worldwide use, with approximately 339,685 bovine embryos transferred in 2010 alone, there are still continuing difficulties with efficiency. It is rare to have more than 40% of fertilized in vitro cattle oocytes reach blastocyst stage by day 8 of culture, and pregnancy rates are reported as less than 45% for in vitro produced embryos. To investigate potential influences in-vitro fertilization (IVF has on embryonic development, this study compares in vivo- and in vitro-derived bovine blastocysts at a similar stage and quality grade (expanded, excellent quality to determine the degree of transcriptomic variation beyond morphology using RNA-Seq. Results A total of 26,906,451 and 38,184,547 fragments were sequenced for in vitro and in vivo embryo pools, respectively. We detected expression for a total of 17,634 genes, with 793 genes showing differential expression between the two embryo populations with false discovery rate (FDR Conclusions Thus, our results support that IVF may influence at the transcriptomic level and that morphology is limited in full characterization of bovine preimplantation embryos.

Derivative flame atomic absorption spectrometry and its application in trace analysis

International Nuclear Information System (INIS)

Sun, H. W.; Li, L. Q.

2005-01-01

Flame atomic absorption spectrometry is an accepted and widely used method for the determination of trace elements in a great variety of samples. But its sensitivity doesn't meet the demands of trace and ultra-trace analysis for some samples. The derivative signal processing technique, with a very high capability for enhancing sensitivity, was developed for flame atomic absorption spectrometry. The signal models of conventional flame atomic absorption spectrometry are described. The equations of derivative signals are established for flame atomic absorption spectrometry, flow injection atomic absorption spectrometry (FI-FAAS) and atom trapping flame atomic absorption spectrometry (AT-FAAS). The principle and performance of the derivative atomic absorption spectrometry are evaluated. The derivative technique based on determination of variation rate of signal intensity with time (dl/dt) is different from the derivative spectrophotometry based on determination of variation rate of signal intensity with wavelength (dl/dhλ). Derivative flame atomic absorption spectrometry has higher sensitivity, lower detection limits and better accuracy. It has been applied to the direct determination of trace elements without preconcentration. If the derivative technique was combined with several preconcentration techniques, the sensitivity would be enhanced further for ultra-trace analysis with good linearity. The applications of derivative flame atomic absorption spectroscopy are reviewed for trace element analysis in biological, pharmaceutical, environmental and food samples

Variational Boussinesq model for strongly nonlinear dispersive waves

NARCIS (Netherlands)

Lawrence, C.; Adytia, D.; van Groesen, E.

2018-01-01

For wave tank, coastal and oceanic applications, a fully nonlinear Variational Boussinesq model with optimized dispersion is derived and a simple Finite Element implementation is described. Improving a previous weakly nonlinear version, high waves over flat and varying bottom are shown to be

Analysis of Post-Fire Vegetation Recovery in the Mediterranean Basin using MODIS Derived Vegetation Indices

Science.gov (United States)

Hawtree, Daniel; San Miguel, Jesus; Sedano, Fernando; Kempeneers, Pieter

2010-05-01

The Mediterranean basin region is highly susceptible to wildfire, with approximately 60,000 individual fires and half a million ha of natural vegetation burnt per year. Of particular concern in this region is the impact of repeated wildfires on the ability of natural lands to return to a pre-fire state, and of the possibility of desertification of semi-arid areas. Given these concerns, understanding the temporal patterns of vegetation recovery is important for the management of environmental resources in the region. A valuable tool for evaluating these recovery patterns are vegetation indices derived from remote sensing data. Previous research on post-fire vegetation recovery conducted in this region has found significant variability in recovery times across different study sites. It is unclear what the primary variables are affecting the differences in the rates of recovery, and if any geographic patterns of behavior exist across the Mediterranean basin. This research has primarily been conducted using indices derived from Landsat imagery. However, no extensive analysis of vegetation regeneration for large regions has been published, and assessment of vegetation recovery on the basis of medium-spatial resolution imagery such as that of MODIS has not yet been analyzed. This study examines the temporal pattern of vegetation recovery in a number of fire sites in the Mediterranean basin, using data derived from MODIS 16 -day composite vegetation indices. The intent is to develop a more complete picture of the temporal sequence of vegetation recovery, and to evaluate what additional factors impact variations in the recovery sequence. In addition, this study evaluates the utility of using MODIS derived vegetation indices for regeneration studies, and compares the findings to earlier studies which rely on Landsat data. Wildfires occurring between the years 2000 and 2004 were considered as potential study sites for this research. Using the EFFIS dataset, all wildfires

Quantitative gene expression profiling of CD45+ and CD45- skeletal muscle-derived side population cells

DEFF Research Database (Denmark)

Ditte Caroline Andersen, Ditte Caroline; Kristiansen, Gitte Qvist; Jensen, Line

2012-01-01

The skeletal muscle-derived side population (mSP) which highly excludes Hoechst 33342 is composed of CD45(+) and CD45(-) subpopulations; yet, rareness of mSP cells in general has complicated extensive quantitative analysis of gene expression profiles in primarily isolated mSP cells. Here, we desc...... a satellite cell subpopulation) remain in the mSPCD45(-) fraction, and we show that these cells express high levels of many of the known myogenic precursor/stem cell related markers, including Pax7 and Myf5.......The skeletal muscle-derived side population (mSP) which highly excludes Hoechst 33342 is composed of CD45(+) and CD45(-) subpopulations; yet, rareness of mSP cells in general has complicated extensive quantitative analysis of gene expression profiles in primarily isolated mSP cells. Here, we...... describe the isolation of adult mouse normal skeletal muscle residing SPCD45(+) and SPCD45(-) cells from a parent mononuclear muscle-derived cell (MDC) population. Relative quantitative real time PCR (RT-PCR) of 64 genes revealed that mSPCD45(-) compared with mSPCD45(+) was enriched for cells expressing...

Variational principles in terms of entransy for heat transfer

International Nuclear Information System (INIS)

Xu, Mingtian

2012-01-01

A variational principle for heat conduction is formulated which results in the steady state heat conduction equation established from the Fourier law. Furthermore based on the thermodynamics in terms of entransy a more general functional is defined for incompressible fluids. We show that extremizing this functional gives rise to the state described by the Navier-Stokes-Fourier equations with vanishing substantive derivatives of the temperature and velocity field. In this sense one may conclude that this variational principle is consistent with the Navier-Stokes-Fourier equations. Therefore the variational principle developed in the present work demonstrates a great advantage over the minimum entropy production principle. -- Highlights: ► A variational principle for heat transfer of incompressible fluid is established in terms of entransy. ► For pure heat conduction the variational principle leads to the classical steady state heat conduction equation. ► For heat convection the variational principle is consistent with the Navier-Stokes-Fourier equations.

Bipower variation for Gaussian processes with stationary increments

DEFF Research Database (Denmark)

Barndorff-Nielsen, Ole Eiler; Corcuera, José Manuel; Podolskij, Mark

2009-01-01

Convergence in probability and central limit laws of bipower variation for Gaussian processes with stationary increments and for integrals with respect to such processes are derived. The main tools of the proofs are some recent powerful techniques of Wiener/Itô/Malliavin calculus for establishing...

Variational integrators in plasma physics

Energy Technology Data Exchange (ETDEWEB)

Kraus, Michael

2013-07-01

To a large extent, research in plasma physics is concerned with the description and analysis of energy and momentum transfer between different scales and different kinds of waves. In the numerical modelling of such phenomena it appears to be crucial to describe the transfer processes preserving the underlying conservation laws in order to prevent physically spurious solutions. In this work, special numerical methods, so called variational integrators, are developed for several models of plasma physics. Special attention is given to conservation properties like conservation of energy and momentum. By design, variational integrators are applicable to all systems that have a Lagrangian formulation. Usually, equations of motion are derived by Hamilton's action principle and then discretised. In the application of the variational integrator theory, the order of these steps is reversed. At first, the Lagrangian and the accompanying variational principle are discretised, such that discrete equations of motion can be obtained directly by applying the discrete variational principle to the discrete Lagrangian. The advantage of this approach is that the resulting discretisation automatically retains the conservation properties of the continuous system. Following an overview of the geometric formulation of classical mechanics and field theory, which forms the basis of the variational integrator theory, variational integrators are introduced in a framework adapted to problems from plasma physics. The applicability of variational integrators is explored for several important models of plasma physics: particle dynamics (guiding centre dynamics), kinetic theory (the Vlasov-Poisson system) and fluid theory (magnetohydrodynamics). These systems, with the exception of guiding centre dynamics, do not possess a Lagrangian formulation to which the variational integrator methodology is directly applicable. Therefore the theory is extended by linking it to Ibragimov's theory of

Characterization and potential functional significance of human-chimpanzee large INDEL variation

Directory of Open Access Journals (Sweden)

Polavarapu Nalini

2011-10-01

Full Text Available Abstract Background Although humans and chimpanzees have accumulated significant differences in a number of phenotypic traits since diverging from a common ancestor about six million years ago, their genomes are more than 98.5% identical at protein-coding loci. This modest degree of nucleotide divergence is not sufficient to explain the extensive phenotypic differences between the two species. It has been hypothesized that the genetic basis of the phenotypic differences lies at the level of gene regulation and is associated with the extensive insertion and deletion (INDEL variation between the two species. To test the hypothesis that large INDELs (80 to 12,000 bp may have contributed significantly to differences in gene regulation between the two species, we categorized human-chimpanzee INDEL variation mapping in or around genes and determined whether this variation is significantly correlated with previously determined differences in gene expression. Results Extensive, large INDEL variation exists between the human and chimpanzee genomes. This variation is primarily attributable to retrotransposon insertions within the human lineage. There is a significant correlation between differences in gene expression and large human-chimpanzee INDEL variation mapping in genes or in proximity to them. Conclusions The results presented herein are consistent with the hypothesis that large INDELs, particularly those associated with retrotransposons, have played a significant role in human-chimpanzee regulatory evolution.

Functional variation in the gut microbiome of wild Drosophila populations.

Science.gov (United States)

Bost, Alyssa; Martinson, Vincent G; Franzenburg, Soeren; Adair, Karen L; Albasi, Alice; Wells, Martin T; Douglas, Angela E

2018-05-26

Most of the evidence that the gut microbiome of animals is functionally variable, with consequences for the health and fitness of the animal host, is based on laboratory studies, often using inbred animals under tightly controlled conditions. It is largely unknown whether these microbiome effects would be evident in outbred animal populations under natural conditions. In this study, we quantified the functional traits of the gut microbiota (metagenome) and host (gut transcriptome) and the taxonomic composition of the gut microorganisms (16S rRNA gene sequence) in natural populations of three mycophagous Drosophila species. Variation in microbiome function and composition was driven principally by the period of sample collection, while host function varied mostly with Drosophila species, indicating that variation in microbiome traits is determined largely by environmental factors, and not host taxonomy. Despite this, significant correlations between microbiome and host functional traits were obtained. In particular, microbiome functions dominated by metabolism were positively associated with host functions relating to gut epithelial turnover. Much of the functional variation in the microbiome could be attributed to variation in abundance of Bacteroidetes, rather than the two other abundant groups, the γ-Proteobacteria or Lactobacillales. We conclude that functional variation in the interactions between animals and their gut microbiome can be detectable in natural populations and, in mycophagous Drosophila, this variation relates primarily to metabolism and homeostasis of the gut epithelium. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Accelerated Simulation of Kinetic Transport Using Variational Principles and Sparsity

Energy Technology Data Exchange (ETDEWEB)

Caflisch, Russel [Univ. of California, Los Angeles, CA (United States)

2017-06-30

This project is centered on the development and application of techniques of sparsity and compressed sensing for variational principles, PDEs and physics problems, in particular for kinetic transport. This included derivation of sparse modes for elliptic and parabolic problems coming from variational principles. The research results of this project are on methods for sparsity in differential equations and their applications and on application of sparsity ideas to kinetic transport of plasmas.

Chernobyl derived activity in sheep: variation within a single flock and with time

International Nuclear Information System (INIS)

Walters, B.

1988-01-01

The continuous monitoring of the caesium contents of sheep grazing a high fell in Cumbria, UK, is described. The technique of in-vivo monitoring, using portable NaI crystal detectors, is shown to be robust and capable of producing accurate quantitative data. Results are presented from the monitoring of 100 sheep at fortnightly intervals over a period of 13 weeks. The peak average activity (1300 Bq kg -1 ) was reached five weeks after introduction of the sheep to grazing land with up to 2000 Bq kg -1 in herbage. Activity had fallen, on average, to 68% of the peak value after eight weeks. The variation in activity between individual sheep is large and usually symmetrically distributed. The temporal trend of activity in the whole flock is a combination of the many disparate individual trends. The technique has allowed the variation between animals and individual time trends to be followed. (author)

Modeling the diurnal tide with dissipation derived from UARS/HRDI measurements

Directory of Open Access Journals (Sweden)

M. A. Geller

1997-09-01

Full Text Available This paper uses dissipation values derived from UARS/HRDI observations in a recently published diurnal-tide model. These model structures compare quite well with the UARS/HRDI observations with respect to the annual variation of the diurnal tidal amplitudes and the size of the amplitudes themselves. It is suggested that the annual variation of atmospheric dissipation in the mesosphere-lower thermosphere is a major controlling factor in determining the annual variation of the diurnal tide.

A first course in the calculus of variations

CERN Document Server

Kot, Mark

2014-01-01

This book is intended for a first course in the calculus of variations, at the senior or beginning graduate level. The reader will learn methods for finding functions that maximize or minimize integrals. The text lays out important necessary and sufficient conditions for extrema in historical order, and it illustrates these conditions with numerous worked-out examples from mechanics, optics, geometry, and other fields. The exposition starts with simple integrals containing a single independent variable, a single dependent variable, and a single derivative, subject to weak variations, but stead

Multidimensional analysis of Drosophila wing variation in Evolution ...

Indian Academy of Sciences (India)

In this study, using Drosophila melanogaster isofemale lines derived from wild flies collected on both slopes of the canyon, we investigated the effect of developmental temperature upon the different components of phenotypic variation of a complex trait: the wing. Combining geometric and traditional morphometrics, we find ...

Non-Noether symmetries of Hamiltonian systems with conformable fractional derivatives

International Nuclear Information System (INIS)

Wang Lin-Li; Fu Jing-Li

2016-01-01

In this paper, we present the fractional Hamilton’s canonical equations and the fractional non-Noether symmetry of Hamilton systems by the conformable fractional derivative. Firstly, the exchanging relationship between isochronous variation and fractional derivatives, and the fractional Hamilton principle of the system under this fractional derivative are proposed. Secondly, the fractional Hamilton’s canonical equations of Hamilton systems based on the Hamilton principle are established. Thirdly, the fractional non-Noether symmetries, non-Noether theorem and non-Noether conserved quantities for the Hamilton systems with the conformable fractional derivatives are obtained. Finally, an example is given to illustrate the results. (paper)

On passive scalar derivative statistics in grid turbulence

International Nuclear Information System (INIS)

Tong, C.; Warhaft, Z.

1994-01-01

The probability density function, and related statistics, of scalar (temperature) derivative fluctuations in decaying grid turbulence with an imposed cross-stream, passive linear temperature profile, is studied for a turbulence Reynolds number range, Re l , varying from 50 to 1200, (corresponding to a Taylor Reynolds number range 30 λ θy has a value of 1.8±0.2 (twice the value observed in shear flows), and has no significant variation with Reynolds number. The ratio of the temperature derivative standard deviation along the gradient to that normal to it is approximately 1.2±0.1 also, with no variation with Re. The kurtosis of the derivatives increases approximately as Re 0.2 l . The results show that the rare, intense temperature deviations that produce the skewed scalar derivative, increase in frequency, but their area fraction (of the total field) becomes smaller as the Reynolds number increases. Thus, since S θy remains constant, they become sharper and more intense, occurring deeper in the tails of the probability density function. Measurements in a thermal mixing layer, which has a nonlinear mean temperature profile, are also presented, and these show a similar value of S θy to the linear profile case. The experiments broadly confirm the two-dimensional numerical simulations of Holzer and Siggia [Phys. Fluids (in press)], as well as other recent simulations, although there are some differences

Variational divergence in wave scattering theory with Kirchhoffean trial functions

Science.gov (United States)

Bird, J. F.

1986-01-01

In a recent study of variational improvement of the Kirchhoff approximation for electromagnetic scattering by rough surfaces, a key ingredient in the variational principle was found to diverge for important configurations (e.g., backscatter) if the polarization had any vertical component. The cause and a cure of this divergence are discussed here. The divergence is demonstrated to occur for arbitrary perfectly conducting scatterers and its universal characterstics are determined, by means of a general divergence criterion that is derived. A variational cure for the divergence is prescribed, and it is tested successfully on a standard scattering model.

Progressive erosion of genetic and epigenetic variation in callus-derived cocoa (Theobroma cacao) plants.

Science.gov (United States)

Rodríguez López, Carlos M; Wetten, Andrew C; Wilkinson, Michael J

2010-06-01

*Relatively little is known about the timing of genetic and epigenetic forms of somaclonal variation arising from callus growth. We surveyed for both types of change in cocoa (Theobroma cacao) plants regenerated from calli of various ages, and also between tissues from the source trees. *For genetic change, we used 15 single sequence repeat (SSR) markers from four source trees and from 233 regenerated plants. For epigenetic change, we used 386 methylation-sensitive amplified polymorphism (MSAP) markers on leaf and explant (staminode) DNA from two source trees and on leaf DNA from 114 regenerants. *Genetic variation within source trees was limited to one slippage mutation in one leaf. Regenerants were far more variable, with 35% exhibiting at least one mutation. Genetic variation initially accumulated with culture age but subsequently declined. MSAP (epigenetic) profiles diverged between leaf and staminode samples from source trees. Multivariate analysis revealed that leaves from regenerants occupied intermediate eigenspace between leaves and staminodes of source plants but became progressively more similar to source tree leaves with culture age. *Statistical analysis confirmed this rather counterintuitive finding that leaves of 'late regenerants' exhibited significantly less genetic and epigenetic divergence from source leaves than those exposed to short periods of callus growth.

L{sup {infinity}} Variational Problems with Running Costs and Constraints

Energy Technology Data Exchange (ETDEWEB)

Aronsson, G., E-mail: gunnar.aronsson@liu.se [Linkoeping University, Department of Mathematics (Sweden); Barron, E. N., E-mail: enbarron@math.luc.edu [Loyola University of Chicago, Department of Mathematics and Statistics (United States)

2012-02-15

Various approaches are used to derive the Aronsson-Euler equations for L{sup {infinity}} calculus of variations problems with constraints. The problems considered involve holonomic, nonholonomic, isoperimetric, and isosupremic constraints on the minimizer. In addition, we derive the Aronsson-Euler equation for the basic L{sup {infinity}} problem with a running cost and then consider properties of an absolute minimizer. Many open problems are introduced for further study.

Silsesquioxane-derived ceramic fibres

Science.gov (United States)

Hurwitz, F. I.; Farmer, S. C.; Terepka, F. M.; Leonhardt, T. A.

1991-01-01

Fibers formed from blends of silsesquioxane polymers were characterized to study the pyrolytic conversion of these precursors to ceramics. The morphology of fibers pyrolyzed to 1400 C revealed primarily amorphous glasses whose conversion to beta-SiC is a function of both blend composition and pyrolysis conditions. Formation of beta-SiC crystallites within the glassy phase is favored by higher than stoichiometric C/Si ratios, while carbothermal reduction of Si-O bonds to form SiC with loss of SiO and CO occurs at higher methyl/phenylpropyl silsesquioxane (lower C/Si) ratios. As the carbothermal reduction is assumed to be diffusion controlled, the fibers can serve as model systems to gain understanding of the silsesquioxane pyrolysis behavior, and therefore are useful in the development of polysilsesquioxane-derived ceramic matrices and coatings as well.

Variational approaches to conservation laws for a nonlinear ...

African Journals Online (AJOL)

The conservation laws of a nonlinear evolution equation of time dependent variable coefficients of damping and dispersion is studied. The equation under consideration is not derivable from a variational principle which means that one cannot appeal to the Noether theorem to determine the conservation laws. We utilize the ...

Variational random phase approximation for the anharmonic oscillator

International Nuclear Information System (INIS)

Dukelsky, J.; Schuck, P.

1990-04-01

The recently derived Variational Random Phase Approximation is examined using the anharmonic oscillator model. Special attention is paid to the ground state RPA wave function and the convergence of the proposed truncation scheme to obtain the diagonal density matrix. Comparison with the standard Coupled Cluster method is made

Genetic variation of viral protein 1 genes of field strains of waterfowl parvoviruses and their attenuated derivatives.

Science.gov (United States)

Tsai, Hsiang-Jung; Tseng, Chun-hsien; Chang, Poa-chun; Mei, Kai; Wang, Shih-Chi

2004-09-01

To understand the genetic variations between the field strains of waterfowl parvoviruses and their attenuated derivatives, we analyzed the complete nucleotide sequences of the viral protein 1 (VP1) genes of nine field strains and two vaccine strains of waterfowl parvoviruses. Sequence comparison of the VP1 proteins showed that these viruses could be divided into goose parvovirus (GPV) related and Muscovy duck parvovirus (MDPV) related groups. The amino acid difference between GPV- and MDPV-related groups ranged from 13.1% to 15.8%, and the most variable region resided in the N terminus of VP2. The vaccine strains of GPV and MDPV exhibited only 1.2% and 0.3% difference in amino acid when compared with their parental field strains, and most of these differences resided in residues 497-575 of VP1, suggesting that these residues might be important for the attenuation of GPV and MDPV. When the GPV strains isolated in 1982 (the strain 82-0308) and in 2001 (the strain 01-1001) were compared, only 0.3% difference in amino acid was found, while MDPV strains isolated in 1990 (the strain 90-0219) and 1997 (the strain 97-0104) showed only 0.4% difference in amino acid. The result indicates that the genome of waterfowl parvovirus had remained highly stable in the field.

[Genetic variations in alcohol dehydrogenase, drinking habits and alcoholism

DEFF Research Database (Denmark)

Tolstrup, J.S.; Rasmussen, S.; Tybjaerg-Hansen, A.

2008-01-01

Alcohol is degraded primarily by alcohol dehydrogenase (ADH), and genetic variation that affects the rate of alcohol degradation is found in ADH1B and ADH1C. By genotyping 9,080 white men and women from the general population, we found that men and women with ADH1B slow versus fast alcohol...... degradation drank approximately 30% more alcohol per week and had a higher risk of everyday and heavy drinking, and of alcoholism. Individuals with ADH1C slow versus fast alcohol degradation had a higher risk of heavy drinking Udgivelsesdato: 2008/8/25...

Derivation of the RPA (Random Phase Approximation) Equation of ATDDFT (Adiabatic Time Dependent Density Functional Ground State Response Theory) from an Excited State Variational Approach Based on the Ground State Functional.

Science.gov (United States)

Ziegler, Tom; Krykunov, Mykhaylo; Autschbach, Jochen

2014-09-09

The random phase approximation (RPA) equation of adiabatic time dependent density functional ground state response theory (ATDDFT) has been used extensively in studies of excited states. It extracts information about excited states from frequency dependent ground state response properties and avoids, thus, in an elegant way, direct Kohn-Sham calculations on excited states in accordance with the status of DFT as a ground state theory. Thus, excitation energies can be found as resonance poles of frequency dependent ground state polarizability from the eigenvalues of the RPA equation. ATDDFT is approximate in that it makes use of a frequency independent energy kernel derived from the ground state functional. It is shown in this study that one can derive the RPA equation of ATDDFT from a purely variational approach in which stationary states above the ground state are located using our constricted variational DFT (CV-DFT) method and the ground state functional. Thus, locating stationary states above the ground state due to one-electron excitations with a ground state functional is completely equivalent to solving the RPA equation of TDDFT employing the same functional. The present study is an extension of a previous work in which we demonstrated the equivalence between ATDDFT and CV-DFT within the Tamm-Dancoff approximation.

An Efficient Power Regeneration and Drive Method of an Induction Motor by Means of an Optimal Torque Derived by Variational Method

Science.gov (United States)

Inoue, Kaoru; Ogata, Kenji; Kato, Toshiji

When the motor speed is reduced by using a regenerative brake, the mechanical energy of rotation is converted to the electrical energy. When the regenerative torque is large, the corresponding current increases so that the copper loss also becomes large. On the other hand, the damping effect of rotation increases according to the time elapse when the regenerative torque is small. In order to use the limited energy effectively, an optimal regenerative torque should be discussed in order to regenerate electrical energy as much as possible. This paper proposes a design methodology of a regenerative torque for an induction motor to maximize the regenerative electric energy by means of the variational method. Similarly, an optimal torque for acceleration is derived in order to minimize the energy to drive. Finally, an efficient motor drive system with the proposed optimal torque and the power storage system stabilizing the DC link voltage will be proposed. The effectiveness of the proposed methods are illustrated by both simulations and experiments.

DUVAS (derivative uv-absorption spectrometer): instrument description and operating manual

International Nuclear Information System (INIS)

Hawthorne, A.R.; Dougherty, J.M.; Metcalfe, C.E.

1980-11-01

DUVAS is a real-time, field-portable spectrometer capable of monitoring a variety of aromatic organic vapors and inorganic gases at sub-ppM concentrations. The instrument is a prototype, microcomputer-controlled, derivative ultraviolet (UV) absorption spectrometer (DUVAS) developed primarily for area monitoring at coal conversion facilities, although other important occupational and environmental monitoring applications for compounds such as SO 2 , NO/sub x/, NH 3 , and HCHO are also being pursued

Synthetic or Food-Derived Vitamin C?Are They Equally Bioavailable?

OpenAIRE

Carr, Anitra C.; Vissers, Margreet C. M.

2013-01-01

Vitamin C (ascorbate) is an essential water-soluble micronutrient in humans and is obtained through the diet, primarily from fruits and vegetables. In vivo, vitamin C acts as a cofactor for numerous biosynthetic enzymes required for the synthesis of amino acid-derived macromolecules, neurotransmitters, and neuropeptide hormones, and is also a cofactor for various hydroxylases involved in the regulation of gene transcription and epigenetics. Vitamin C was first chemically synthesized in the ea...

SU-E-T-429: Uncertainties of Cell Surviving Fractions Derived From Tumor-Volume Variation Curves

International Nuclear Information System (INIS)

Chvetsov, A

2014-01-01

Purpose: To evaluate uncertainties of cell surviving fraction reconstructed from tumor-volume variation curves during radiation therapy using sensitivity analysis based on linear perturbation theory. Methods: The time dependent tumor-volume functions V(t) have been calculated using a twolevel cell population model which is based on the separation of entire tumor cell population in two subpopulations: oxygenated viable and lethally damaged cells. The sensitivity function is defined as S(t)=[δV(t)/V(t)]/[δx/x] where δV(t)/V(t) is the time dependent relative variation of the volume V(t) and δx/x is the relative variation of the radiobiological parameter x. The sensitivity analysis was performed using direct perturbation method where the radiobiological parameter x was changed by a certain error and the tumor-volume was recalculated to evaluate the corresponding tumor-volume variation. Tumor volume variation curves and sensitivity functions have been computed for different values of cell surviving fractions from the practically important interval S 2 =0.1-0.7 using the two-level cell population model. Results: The sensitivity functions of tumor-volume to cell surviving fractions achieved a relatively large value of 2.7 for S 2 =0.7 and then approached zero as S 2 is approaching zero Assuming a systematic error of 3-4% we obtain that the relative error in S 2 is less that 20% in the range S2=0.4-0.7. This Resultis important because the large values of S 2 are associated with poor treatment outcome should be measured with relatively small uncertainties. For the very small values of S2<0.3, the relative error can be larger than 20%; however, the absolute error does not increase significantly. Conclusion: Tumor-volume curves measured during radiotherapy can be used for evaluation of cell surviving fractions usually observed in radiation therapy with conventional fractionation

Effect of mass variation on dynamics of tethered system in orbital maneuvering

Science.gov (United States)

Sun, Liang; Zhao, Guowei; Huang, Hai

2018-05-01

In orbital maneuvering, the mass variation due to fuel consumption has an obvious impact on the dynamics of tethered system, which cannot be neglected. The contributions of the work are mainly shown in two aspects: 1) the improvement of the model; 2) the analysis of dynamics characteristics. As the mass is variable, and the derivative of the mass is directly considered in the traditional Lagrange equation, the expression of generalized force is complicated. To solve this problem, the coagulated derivative is adopted in the paper; besides, the attitude dynamics equations derived in this paper take into account the effect of mass variation and the drift of orbital trajectory at the same time. The bifurcation phenomenon, the pendular motion angular frequency, and amplitudes of tether vibration revealed in this paper can provide a reference for the parameters and controller design in practical engineering. In the article, a dumbbell model is adopted to analyze the dynamics of tethered system, in which the mass variation of base satellite is fully considered. Considering the practical application, the case of orbital transfer under a transversal thrust is mainly studied. Besides, compared with the analytical solutions of librational angles, the effects of mass variation on stability and librational characteristic are studied. Finally, in order to make an analysis of the effect on vibrational characteristic, a lumped model is introduced, which reveals a strong coupling of librational and vibrational characteristics.

GAUGE PRINCIPLE AND VARIATIONAL FORMULATION FOR FLOWS OF AN IDEAL FLUID

Institute of Scientific and Technical Information of China (English)

KAMBE Tsutomu

2003-01-01

A gauge principle is applied to mass flows of an ideal compressible fluid subject to Galilei transformation. A free-field Lagrangian defined at the outset is invariant with respect to global SO(3) gauge transformations as well as Galilei transformations. The action principle leads to the equation of potential flows under constraint of a continuity equation. However, the irrotational flow is not invariant with respect to local SO(3) gauge transformations. According to the gauge principle,a gauge-covariant derivative is defined by introducing a new gauge field. Galilei invariance of the derivative requires the gauge field to coincide with the vorticity, i.e. the curl of the velocity field. A full gauge-covariant variational formulation is proposed on the basis of the Hamilton's principle and an assoicated Lagrangian. By means of an isentropic material variation taking into account individual particle motion, the Euler's equation of motion is derived for isentropic flows by using the covariant derivative. Noether's law associated with global SO(3) gauge invariance leads to the conservation of total angular momentum. In addition, the Lagrangian has a local symmetry of particle permutation which results in local conservation law equivalent to the vorticity equation.

49 CFR 37.195 - Purchase or lease of OTRBs by private entities not primarily in the business of transporting people.

Science.gov (United States)

2010-10-01

... primarily in the business of transporting people. 37.195 Section 37.195 Transportation Office of the... transporting people. This section applies to all purchases or leases of new vehicles by private entities which are not primarily engaged in the business of transporting people, with respect to buses delivered to...

Variational approach in transport theory

International Nuclear Information System (INIS)

Panta Pazos, R.; Tullio de Vilhena, M.

2004-01-01

In this work we present a variational approach to some methods to solve transport problems of neutral particles. We consider a convex domain X (for example the geometry of a slab, or a convex set in the plane, or a convex bounded set in the space) and we use discrete ordinates quadrature to get a system of differential equations derived from the neutron transport equation. The boundary conditions are vacuum for a subset of the boundary, and of specular reflection for the complementary subset of the boundary. Recently some different approximation methods have been presented to solve these transport problems. We introduce in this work the adjoint equations and the conjugate functions obtained by means of the variational approach. First we consider the general formulation, and then some numerical methods such as spherical harmonics and spectral collocation method. (authors)

Variational approach in transport theory

Energy Technology Data Exchange (ETDEWEB)

Panta Pazos, R. [Nucler Engineering Department, UFRGS, Porto-Alegre (Brazil); Tullio de Vilhena, M. [Institute of Mathematics, UFRGS, Porto-Alegre (Brazil)

2004-07-01

In this work we present a variational approach to some methods to solve transport problems of neutral particles. We consider a convex domain X (for example the geometry of a slab, or a convex set in the plane, or a convex bounded set in the space) and we use discrete ordinates quadrature to get a system of differential equations derived from the neutron transport equation. The boundary conditions are vacuum for a subset of the boundary, and of specular reflection for the complementary subset of the boundary. Recently some different approximation methods have been presented to solve these transport problems. We introduce in this work the adjoint equations and the conjugate functions obtained by means of the variational approach. First we consider the general formulation, and then some numerical methods such as spherical harmonics and spectral collocation method. (authors)

Variations in the small-scale galactic magnetic field and short time-scale intensity variations of extragalactic radio sources

International Nuclear Information System (INIS)

Simonetti, J.H.

1985-01-01

Structure functions of the Faraday rotation measures (RMs) of extragalactic radio sources are used to investigate variations in the interstellar magnetic field on length scales of approx.0.01 to 100 pc. Model structure functions derived assuming a power-law power spectrum of irregularities in n/sub e/B, are compared with those observed. The results indicate an outer angular scale for RM variations of approximately less than or equal to 5 0 and evidence for RM variations on scales as small as 1'. Differences in the variance of n/sub e/B fluctuations for various lines of sight through the Galaxy are found. Comparison of pulsar scintillations in right- and left-circular polarizations yield an upper limit to the variations in n/sub e/ on a length scale of approx.10 11 cm. RMs were determined through high-velocity molecular flows in galactic star-formation regions, with the goal of constraining magnetic fields in and near the flows. RMs of 7 extragalactic sources with a approx.20 arcmin wide area seen through Cep A, fall in two groups separated by approx.150 rad m -2 - large given our knowledge of RM variations on small angular scales and possibly a result of the anisotropy of the high-velocity material

A variational proof of Thomson's theorem

Energy Technology Data Exchange (ETDEWEB)

Fiolhais, Miguel C.N., E-mail: miguel.fiolhais@cern.ch [Department of Physics, City College of the City University of New York, 160 Convent Avenue, New York, NY 10031 (United States); Department of Physics, New York City College of Technology, 300 Jay Street, Brooklyn, NY 11201 (United States); LIP, Department of Physics, University of Coimbra, 3004-516 Coimbra (Portugal); Essén, Hanno [Department of Mechanics, Royal Institute of Technology (KTH), Stockholm SE-10044 (Sweden); Gouveia, Tomé M. [Cavendish Laboratory, 19 JJ Thomson Avenue, Cambridge CB3 0HE (United Kingdom)

2016-08-12

Thomson's theorem of electrostatics, which states the electric charge on a set of conductors distributes itself on the conductor surfaces to minimize the electrostatic energy, is reviewed in this letter. The proof of Thomson's theorem, based on a variational principle, is derived for a set of normal charged conductors, with and without the presence of external electric fields produced by fixed charge distributions. In this novel approach, the variations are performed on both the charge densities and electric potentials, by means of a local Lagrange multiplier associated with Poisson's equation, constraining the two variables.

Phenotypic variation in Lactococcus lactis subsp. lactis isolates derived from intestinal tracts of marine and freshwater fish.

Science.gov (United States)

Itoi, S; Yuasa, K; Washio, S; Abe, T; Ikuno, E; Sugita, H

2009-09-01

We compared phenotypic characteristics of Lactococcus lactis subsp. lactis derived from different sources including the intestinal tract of marine fish and freshwater fish, and cheese starter culture. In the phylogenetic analysis based on partial 16S rRNA gene nucleotide sequences (1371 bp), freshwater fish-, marine fish- and cheese starter culture-derived strains were identical to that of L. lactis subsp. lactis previously reported. Fermentation profiles determined using the API 50 CH system were similar except for fermentation of several sugars including l-arabinose, mannitol, amygdalin, saccharose, trehalose, inulin and gluconate. The strains did have distinct levels of halotolerance: marine fish-derived strains > cheese starter-derived strain > freshwater fish-derived isolate. Lactococcus lactis subsp. lactis showed extensive diversity in phenotypic adaptation to various environments. The phenotypic properties of these strains suggested that L. lactis subsp. lactis strains from fish intestine have additional functions compared with the cheese starter-derived strain that has previously described. The unique phenotypic traits of the fish intestinal tract-derived L. lactis subsp. lactis might make them useful as a probiotics in aquaculture, and contribute to the development of functional foods and novel food additives, since the strains derived from fish intestines might have additional functions such as antibacterial activity.

Diurnal variations of Titan's ionosphere

Science.gov (United States)

Cui, J.; Galand, M.; Yelle, R. V.; Vuitton, V.; Wahlund, J.-E.; Lavvas, P. P.; Müller-Wodarg, I. C. F.; Cravens, T. E.; Kasprzak, W. T.; Waite, J. H.

2009-06-01

We present our analysis of the diurnal variations of Titan's ionosphere (between 1000 and 1300 km) based on a sample of Ion Neutral Mass Spectrometer (INMS) measurements in the Open Source Ion (OSI) mode obtained from eight close encounters of the Cassini spacecraft with Titan. Although there is an overall ion depletion well beyond the terminator, the ion content on Titan's nightside is still appreciable, with a density plateau of ˜700 cm-3 below ˜1300 km. Such a plateau is a combined result of significant depletion of light ions and modest depletion of heavy ones on Titan's nightside. We propose that the distinctions between the diurnal variations of light and heavy ions are associated with their different chemical loss pathways, with the former primarily through “fast” ion-neutral chemistry and the latter through “slow” electron dissociative recombination. The strong correlation between the observed night-to-day ion density ratios and the associated ion lifetimes suggests a scenario in which the ions created on Titan's dayside may survive well to the nightside. The observed asymmetry between the dawn and dusk ion density profiles also supports such an interpretation. We construct a time-dependent ion chemistry model to investigate the effect of ion survival associated with solid body rotation alone as well as superrotating horizontal winds. For long-lived ions, the predicted diurnal variations have similar general characteristics to those observed. However, for short-lived ions, the model densities on the nightside are significantly lower than the observed values. This implies that electron precipitation from Saturn's magnetosphere may be an additional and important contributor to the densities of the short-lived ions observed on Titan's nightside.

Convex Minimization with Constraints of Systems of Variational Inequalities, Mixed Equilibrium, Variational Inequality, and Fixed Point Problems

Directory of Open Access Journals (Sweden)

Lu-Chuan Ceng

2014-01-01

Full Text Available We introduce and analyze one iterative algorithm by hybrid shrinking projection method for finding a solution of the minimization problem for a convex and continuously Fréchet differentiable functional, with constraints of several problems: finitely many generalized mixed equilibrium problems, finitely many variational inequalities, the general system of variational inequalities and the fixed point problem of an asymptotically strict pseudocontractive mapping in the intermediate sense in a real Hilbert space. We prove strong convergence theorem for the iterative algorithm under suitable conditions. On the other hand, we also propose another iterative algorithm by hybrid shrinking projection method for finding a fixed point of infinitely many nonexpansive mappings with the same constraints, and derive its strong convergence under mild assumptions.

Recent changes in seasonal variations of climate within the range of northern caribou populations

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Paul H. Whitfield

2005-05-01

Full Text Available The Arctic is one region where it is expected that the impacts of a globally changing climate will be readily observed. We present results that indicate that climate derivatives of potential significance to caribou changed during the past 50 years. Many temperature derivatives reflect the increasing overall temperature in the Arctic such as decreases in the number of days with low temperatures, increases in the number of days with thaw, and days with extremely warm temperatures. Other derivatives reflect changes in the precipitation regime such as days with heavy precipitation and number of days when rain fell on snow. Our results indicate that specific caribou herds from across the Arctic were subjected to different variations of these derivatives in different seasons in the recent past. Examination of temperature and precipitation at finer time-steps than annual or monthly means, shows that climatic variations in the region are neither consistent through the seasons nor across space. Decadal changes in seasonal patterns of temperature and precipitation are shown for selected herds. A process for assessing caribou-focused climate derivatives is proposed.

Gender-based differences in the shape of the human corpus callosum are associated with allometric variations

Science.gov (United States)

Bruner, Emiliano; de la Cuétara, José Manuel; Colom, Roberto; Martin-Loeches, Manuel

2012-01-01

The corpus callosum displays considerable morphological variability between individuals. Although some characteristics are thought to differ between male and female brains, there is no agreement regarding the source of this variation. Biomedical imaging and geometric morphometrics have provided tools to investigate shape and size variation in terms of integration and correlation. Here we analyze variations at the midsagittal outline of the corpus callosum in a sample of 102 young adults in order to describe and quantify the pattern of covariation associated with its morphology. Our results suggest that the shape of the corpus callosum is characterized by low levels of morphological integration, which explains the large variability. In larger brains, a minor allometric component involves a relative reduction of the splenium. Small differences between males and?females are associated with this allometric pattern, induced primarily by size variation rather than gender-specific characteristics. PMID:22296183

Variation of several agronomic and biochemical traits in γ-ray induced mutant soybeans

International Nuclear Information System (INIS)

Shim, Kyo Moon; Kim, Sun Hyung; Kim, Nam Soo; Son, Hi Sup; Rhee, Hae Ik

1996-01-01

Two soybean cultivars(Paldalkong and Bangsakong) were irradiated with gamma-ray to reduce seed size, which is an important trait for soybean sprout and the derived mutant soybeans were analyzed in several agronomic and biochemical traits. There were high levels of variations in quantitative traits among the mutants. Several mutant lines showed higher yield and smaller seed than their parents. Qualitative traits such as seed coat color or pubescent color were also changed in a few lines. Biochemical variations were also observed among the mutants. In seed storage protein analysis, many mutant lines showed reduced intensities in β-subunits in 7S globulin than their parents and an additional band in the acidic subunit at 31KDa. Two mutant lines derived from Paldalkong showed an additional band and a shifted band of protease inhibitor by electrophoretic analysis. Variations in isozymes and RAPD were also observed among the mutants. Six isozymes(Adh, Est, Gdh, Idh, Mdh and Pgm) among eleven isozymes showed some variations and six out of ten primers showed polymorphic amplified DNA fragments among the mutants. (author)

Fractional-Order Variational Calculus with Generalized Boundary Conditions

Directory of Open Access Journals (Sweden)

Baleanu Dumitru

2011-01-01

Full Text Available This paper presents the necessary and sufficient optimality conditions for fractional variational problems involving the right and the left fractional integrals and fractional derivatives defined in the sense of Riemman-Liouville with a Lagrangian depending on the free end-points. To illustrate our approach, two examples are discussed in detail.

Allozyme variation in Picea mariana from Newfoundland: Discussion

Science.gov (United States)

William B. Critchfield

1987-01-01

In their recent paper describing the distribution of genetic variation in black spruce (Picea mariana (Mill.) B.S.P.) on the island of Newfoundland, Yeh et el. (1986) concluded that a center of variability in west-central Newfoundland derived from ancestral populations that persisted on the island during the last (Wisconsin) glaciation. They...

Genetic variation shapes protein networks mainly through non-transcriptional mechanisms.

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Eric J Foss

2011-09-01

Full Text Available Networks of co-regulated transcripts in genetically diverse populations have been studied extensively, but little is known about the degree to which these networks cause similar co-variation at the protein level. We quantified 354 proteins in a genetically diverse population of yeast segregants, which allowed for the first time construction of a coherent protein co-variation matrix. We identified tightly co-regulated groups of 36 and 93 proteins that were made up predominantly of genes involved in ribosome biogenesis and amino acid metabolism, respectively. Even though the ribosomal genes were tightly co-regulated at both the protein and transcript levels, genetic regulation of proteins was entirely distinct from that of transcripts, and almost no genes in this network showed a significant correlation between protein and transcript levels. This result calls into question the widely held belief that in yeast, as opposed to higher eukaryotes, ribosomal protein levels are regulated primarily by regulating transcript levels. Furthermore, although genetic regulation of the amino acid network was more similar for proteins and transcripts, regression analysis demonstrated that even here, proteins vary predominantly as a result of non-transcriptional variation. We also found that cis regulation, which is common in the transcriptome, is rare at the level of the proteome. We conclude that most inter-individual variation in levels of these particular high abundance proteins in this genetically diverse population is not caused by variation of their underlying transcripts.

An Ensemble Three-Dimensional Constrained Variational Analysis Method to Derive Large-Scale Forcing Data for Single-Column Models

Science.gov (United States)

Tang, Shuaiqi

Atmospheric vertical velocities and advective tendencies are essential as large-scale forcing data to drive single-column models (SCM), cloud-resolving models (CRM) and large-eddy simulations (LES). They cannot be directly measured or easily calculated with great accuracy from field measurements. In the Atmospheric Radiation Measurement (ARM) program, a constrained variational algorithm (1DCVA) has been used to derive large-scale forcing data over a sounding network domain with the aid of flux measurements at the surface and top of the atmosphere (TOA). We extend the 1DCVA algorithm into three dimensions (3DCVA) along with other improvements to calculate gridded large-scale forcing data. We also introduce an ensemble framework using different background data, error covariance matrices and constraint variables to quantify the uncertainties of the large-scale forcing data. The results of sensitivity study show that the derived forcing data and SCM simulated clouds are more sensitive to the background data than to the error covariance matrices and constraint variables, while horizontal moisture advection has relatively large sensitivities to the precipitation, the dominate constraint variable. Using a mid-latitude cyclone case study in March 3rd, 2000 at the ARM Southern Great Plains (SGP) site, we investigate the spatial distribution of diabatic heating sources (Q1) and moisture sinks (Q2), and show that they are consistent with the satellite clouds and intuitive structure of the mid-latitude cyclone. We also evaluate the Q1 and Q2 in analysis/reanalysis, finding that the regional analysis/reanalysis all tend to underestimate the sub-grid scale upward transport of moist static energy in the lower troposphere. With the uncertainties from large-scale forcing data and observation specified, we compare SCM results and observations and find that models have large biases on cloud properties which could not be fully explained by the uncertainty from the large-scale forcing

Lamin A/C mutation affecting primarily the right side of the heart

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Laura Ollila

2013-04-01

Full Text Available LMNA mutations are amongst the most important causes of familial dilated cardiomyopathy. The most important cause of arrhythmogenic right ventricular cardiomyopathy (ARVC is desmosomal pathology. The aim of the study was to elucidate the role of LMNA mutations among Finnish cardiomyopathy patients. We screened 135 unrelated cardiomyopathy patients for LMNA mutations. Because of unusual phenotype, two patients were screened for the known Finnish ARVC-related mutations of desmosomal genes, and their Plakophilin-2b gene was sequenced. Myocardial samples from two patients were examined by immunohistochemical plakoglobin staining and in one case by electron microscopy. We found a new LMNA mutation Phe237Ser in a family of five affected members with a cardiomyopathy affecting primarily the right side of the heart. The phenotype resembles ARVC but does not fulfill the Task Force Criteria. The main clinical manifestations of the mutation were severe tricuspid insufficiency, right ventricular enlargement and failure. Three of the affected patients died of the heart disease, and the two living patients received heart transplants at ages 44 and 47. Electron microscopy showed nuclear blebbing compatible with laminopathy. Immunohisto - chemical analysis did not suggest desmosomal pathology. No desmosomal mutations were found. The Phe237Ser LMNA mutation causes a phenotype different from traditional cardiolaminopathy. Our findings suggest that cardiomyopathy affecting primarily the right side of the heart is not always caused by desmosomal pathology. Our observations highlight the challenges in classifying cardiomyopathies, as there often is significant overlap between the traditional categories.

Variational multi-valued velocity field estimation for transparent sequences

DEFF Research Database (Denmark)

Ramírez-Manzanares, Alonso; Rivera, Mariano; Kornprobst, Pierre

2011-01-01

Motion estimation in sequences with transparencies is an important problem in robotics and medical imaging applications. In this work we propose a variational approach for estimating multi-valued velocity fields in transparent sequences. Starting from existing local motion estimators, we derive...... a variational model for integrating in space and time such a local information in order to obtain a robust estimation of the multi-valued velocity field. With this approach, we can indeed estimate multi-valued velocity fields which are not necessarily piecewise constant on a layer –each layer can evolve...

Twentieth-Century Hydrometeorological Reconstructions to Study the Multidecadal Variations of the Water Cycle Over France

Science.gov (United States)

Bonnet, R.; Boé, J.; Dayon, G.; Martin, E.

2017-10-01

Characterizing and understanding the multidecadal variations of the continental hydrological cycle is a challenging issue given the limitation of observed data sets. In this paper, a new approach to derive twentieth century hydrological reconstructions over France with an hydrological model is presented. The method combines the results of long-term atmospheric reanalyses downscaled with a stochastic statistical method and homogenized station observations to derive the meteorological forcing needed for hydrological modeling. Different methodological choices are tested and evaluated. We show that using homogenized observations to constrain the results of statistical downscaling help to improve the reproduction of precipitation, temperature, and river flows variability. In particular, it corrects some unrealistic long-term trends associated with the atmospheric reanalyses. Observationally constrained reconstructions therefore constitute a valuable data set to study the multidecadal hydrological variations over France. Thanks to these reconstructions, we confirm that the multidecadal variations previously noted in French river flows have mainly a climatic origin. Moreover, we show that multidecadal variations exist in other hydrological variables (evapotranspiration, snow cover, and soil moisture). Depending on the region, the persistence from spring to summer of soil moisture or snow anomalies generated during spring by temperature and precipitation variations may explain river flows variations in summer, when no concomitant climate variations exist.

Correlations between the geomagnetic field variations, the fluctuations of the earth`s rotation and climate change

Energy Technology Data Exchange (ETDEWEB)

Greiner-Mai, H; Jochmann, H

1995-03-01

The amplitude spectra of global geophysical phenomena were investigated to motivate research of physical connections between them. The suggested causality was derived from comparison of the spectra, and from cross correlation functions. The following global parameters were discussed: For the earth rotation by the variations of the length of day, for the geomagnetic variation by the global field intensity, changes of the dipole axis and the westward drift, and for climate change by the atmospheric excitation function derived from air pressure variations, and temperature variations. The model of atmospheric excitation, which can be proved most exactly for the annual variations of length of day, is responsible for the 11 and 22 years periods, too. It failed for longer periods, e.g. partially for the 30 years periods and completely for the 60 to 80 years periods, which were also discovered in the mean temperature and geomagnetic field variations. Therefore, it was suggested that longer periods in climate change and in the variations of the earth`s rotation are caused independently by the same process in the earth core, provided that a physical influence of the geomagnetic field on climate will be accepted in future. The investigation was completed by comparison with the spectra of some local temperature variations in Europe. (orig.)

Off-energy-shell variations of two-nucleon transition matrix and three-nucleon problem

International Nuclear Information System (INIS)

Stingl, M.; Sauer, P.U.

1975-01-01

For a schematic three-nucleon problem, approximate analytic expressions are derived for the functional derivatives of measurable three-particle quantities with respect to off-shell variations of the triplet-s two-nucleon transition matrix. Those quantities include neutron-deuteron scattering lengths, trinucleon binding energies, and the 3 He charge form-factor minimum; correlations between off-shell changes in the latter two are discussed. An indication is given how results of this kind may be to decide whether or not a given set of discrepancies between calculated and experimental three-nucleon observables can be reconciled in terms of off-shell variations of a nonretarded hermitean two-nucleon interaction. The treatment is not restricted to special classes of phase-shift equivalent potentials or phase-shift preserving transformations but instead makes use of a systematic parameterization of off-shell variations in terms of symmetric rational approximants of increasing order

Lexical variations in the Bible translations

Directory of Open Access Journals (Sweden)

Barashkova Daria Sergeyevna

2018-04-01

Full Text Available The paper contains the comparative analysis of the Ostromir Gospels (1056-1057 and the Synodal translation of the Bible in order to identify lexical variations (alternatives. A source of the analysis are identic contexts from the Bible. Besides the author examines the materials of the others Old Slavonic written manuscripts. As a result of the comparative analysis some lexical options reflecting both synonymic and hyper-hyponymic relations and derivational variability were revealed.

Humeral torsion revisited: a functional and ontogenetic model for populational variation.

Science.gov (United States)

Cowgill, Libby W

2007-12-01

Anthropological interest in humeral torsion has a long history, and several functional explanations for observed variation in the orientation of the humeral head have been proposed. Recent clinical studies have revived this topic by linking patterns of humeral torsion to habitual activities such as overhand throwing. However, the precise functional implications and ontogenetic history of humeral torsion remain unclear. This study examines the ontogeny of humeral torsion in a large sample of primarily immature remains from six different skeletal collections (n = 407). The results of this research confirm that humeral torsion displays consistent developmental variation within all populations of growing children; neonates display relatively posteriorly oriented humeral heads, and the level of torsion declines steadily into adulthood. As in adults, variation in the angle of humeral torsion in immature individuals varies by population, and these differences arise early in development. However, when examined in the context of the developing muscles of the shoulder complex, it becomes apparent that variation in the angle of humeral torsion is not necessarily related to specific habitual activities. Variability in this feature is more likely caused by a generalized functional imbalance between muscles of medial and lateral rotation that can be produced by a wide variety of upper limb activity patterns during growth. (c) 2007 Wiley-Liss, Inc.

VARIATIONAL PRINCIPLE FOR PLANETARY INTERIORS

International Nuclear Information System (INIS)

Zeng, Li; Jacobsen, Stein B.

2016-01-01

In the past few years, the number of confirmed planets has grown above 2000. It is clear that they represent a diversity of structures not seen in our own solar system. In addition to very detailed interior modeling, it is valuable to have a simple analytical framework for describing planetary structures. The variational principle is a fundamental principle in physics, entailing that a physical system follows the trajectory, which minimizes its action. It is alternative to the differential equation formulation of a physical system. Applying the variational principle to the planetary interior can beautifully summarize the set of differential equations into one, which provides us some insight into the problem. From this principle, a universal mass–radius relation, an estimate of the error propagation from the equation of state to the mass–radius relation, and a form of the virial theorem applicable to planetary interiors are derived.

Temporal and spatial variations in the magnitude of completeness ...

Indian Academy of Sciences (India)

Temporal and spatial variations in the magnitude of completeness for homogenized moment magnitude catalogue for northeast India. Ranjit Das H R ... Orthogonal regression relations for conversion of body and surface wave magnitudes to w,HRVD based on events data for the period 1978–2006 have been derived.

Spatial-temporal variation of marginal land suitable for energy plants from 1990 to 2010 in China

Science.gov (United States)

Jiang, Dong; Hao, Mengmeng; Fu, Jingying; Zhuang, Dafang; Huang, Yaohuan

2014-01-01

Energy plants are the main source of bioenergy which will play an increasingly important role in future energy supplies. With limited cultivated land resources in China, the development of energy plants may primarily rely on the marginal land. In this study, based on the land use data from 1990 to 2010(every 5 years is a period) and other auxiliary data, the distribution of marginal land suitable for energy plants was determined using multi-factors integrated assessment method. The variation of land use type and spatial distribution of marginal land suitable for energy plants of different decades were analyzed. The results indicate that the total amount of marginal land suitable for energy plants decreased from 136.501 million ha to 114.225 million ha from 1990 to 2010. The reduced land use types are primarily shrub land, sparse forest land, moderate dense grassland and sparse grassland, and large variation areas are located in Guangxi, Tibet, Heilongjiang, Xinjiang and Inner Mongolia. The results of this study will provide more effective data reference and decision making support for the long-term planning of bioenergy resources. PMID:25056520

A variational principle for the plasma centrifuge

International Nuclear Information System (INIS)

Ludwig, G.O.

1986-09-01

A variational principle is derived which describes the stationary state of the plasma column in a plasma centrifuge. Starting with the fluid equations in a rotating frame the theory is developed using the method of irreversible thermodynamics. This formulation easily leads to an expression for the density distribution of the l-species at sedimentation equilibrium, taking into account the effect of the electric and magnetic forces. Assuming stationary boundary conditions and rigid rotation nonequilibrium states the condition for thermodynamic stability integrated over the volume of the system reduces, under certain restrictions, to the principle of minimum entropy production in the stationary state. This principle yields a variational problem which is equivalent to the original problem posed by the stationary fluid equations. The variational method is useful in achieving approximate solutions that give the electric potential and current distributions in the rotating plasma column consistent with an assumed plasma density profile. (Author) [pt

5S rRNA-derived and tRNA-derived SINEs in fruit bats.

Science.gov (United States)

Gogolevsky, Konstantin P; Vassetzky, Nikita S; Kramerov, Dmitri A

2009-05-01

Most short retroposons (SINEs) descend from cellular tRNA of 7SL RNA. Here, four new SINEs were found in megabats (Megachiroptera) but neither in microbats nor in other mammals. Two of them, MEG-RS and MEG-RL, descend from another cellular RNA, 5S rRNA; one (MEG-T2) is a tRNA-derived SINE; and MEG-TR is a hybrid tRNA/5S rRNA SINE. Insertion locus analysis suggests that these SINEs were active in the recent fruit bat evolution. Analysis of MEG-RS and MEG-RL in comparison with other few 5S rRNA-derived SINEs demonstrates that the internal RNA polymerase III promoter is their most invariant region, while the secondary structure is more variable. The mechanisms underlying the modular structure of these and other SINEs as well as their variation are discussed. The scenario of evolution of MEG SINEs is proposed.

Deriving Area-storage Curves of Global Reservoirs

Science.gov (United States)

Mu, M.; Tang, Q.

2017-12-01

Basic information including capacity, dam height, and largest water area on global reservoirs and dams is well documented in databases such as GRanD (Global Reservoirs and Dams), ICOLD (International Commission on Large Dams). However, though playing a critical role in estimating reservoir storage variations from remote sensing or hydrological models, area-storage (or elevation-storage) curves of reservoirs are not publicly shared. In this paper, we combine Landsat surface water extent, 1 arc-minute global relief model (ETOPO1) and GRanD database to derive area-storage curves of global reservoirs whose area is larger than 1 km2 (6,000 more reservoirs are included). First, the coverage polygon of each reservoir in GRanD is extended to where water was detected by Landsat during 1985-2015. Second, elevation of each pixel in the reservoir is extracted from resampled 30-meter ETOPO1, and then relative depth and frequency of each depth value is calculated. Third, cumulative storage is calculated with increasing water area by every one percent of reservoir coverage area and then the uncalibrated area-storage curve is obtained. Finally, the area-storage curve is linearly calibrated by the ratio of calculated capacity over reported capacity in GRanD. The derived curves are compared with in-situ reservoir data collected in Great Plains Region in US, and the results show that in-situ records are well captured by the derived curves even in relative small reservoirs (several square kilometers). The new derived area-storage curves have the potential to be employed in global monitoring or modelling of reservoirs storage and area variations.

Variational calculations in the gluon sector of the lattice QCD

International Nuclear Information System (INIS)

Patkos, A.; Deak, F.

1981-01-01

The partition function of d dimensional systems is estimated with the help of a variational Ansatz in terms of quasi-(d - 1)-dimensional systems. The internal energy and the string tension derived in this framework agree reasonably with the Monte Carlo data. (orig.)

Hydrogen peroxide production is not primarily increased in human myotubes established from type 2 diabetic subjects.

Science.gov (United States)

Minet, A D; Gaster, M

2011-09-01

Increased oxidative stress and mitochondrial dysfunction have been implicated in the development of insulin resistance in type 2 diabetes. To date, it is unknown whether increased mitochondrial reactive oxygen species (ROS) production in skeletal muscle from patients with type 2 diabetes is primarily increased or a secondary adaptation to environmental, lifestyle, and hormonal factors. This study investigates whether ROS production is primarily increased in isolated diabetic myotubes. Mitochondrial membrane potential, hydrogen peroxide (H(2)O(2)), superoxide, and mitochondrial mass were determined in human myotubes precultured under normophysiological conditions. Furthermore, the corresponding ATP synthesis was measured in isolated mitochondria. Muscle biopsies were taken from 10 lean subjects, 10 obese subjects, and 10 subjects with type 2 diabetes; satellite cells were isolated, cultured, and differentiated to myotubes. Mitochondrial mass, membrane potential/mitochondrial mass, and superoxide-production/mitochondrial mass were not different between groups. In contrast, H(2)O(2) production/mitochondrial mass and ATP production were significantly reduced in diabetic myotubes compared to lean controls (P production is not primarily increased in diabetic myotubes but rather is reduced. Moreover, the comparable ATP/H(2)O(2) ratios indicate that the reduced ROS production in diabetic myotubes parallels the reduced ATP production because ROS production in diabetic myotubes must be considered to be in a proportion comparable to lean. Thus, the increased ROS production seen in skeletal muscle of type 2 diabetic patients is an adaptation to the in vivo conditions.

Sources of Variation in Sweat Chloride Measurements in Cystic Fibrosis

Science.gov (United States)

Blackman, Scott M.; Raraigh, Karen S.; Corvol, Harriet; Rommens, Johanna M.; Pace, Rhonda G.; Boelle, Pierre-Yves; McGready, John; Sosnay, Patrick R.; Strug, Lisa J.; Knowles, Michael R.; Cutting, Garry R.

2016-01-01

Rationale: Expanding the use of cystic fibrosis transmembrane conductance regulator (CFTR) potentiators and correctors for the treatment of cystic fibrosis (CF) requires precise and accurate biomarkers. Sweat chloride concentration provides an in vivo assessment of CFTR function, but it is unknown the degree to which CFTR mutations account for sweat chloride variation. Objectives: To estimate potential sources of variation for sweat chloride measurements, including demographic factors, testing variability, recording biases, and CFTR genotype itself. Methods: A total of 2,639 sweat chloride measurements were obtained in 1,761 twins/siblings from the CF Twin-Sibling Study, French CF Modifier Gene Study, and Canadian Consortium for Genetic Studies. Variance component estimation was performed by nested mixed modeling. Measurements and Main Results: Across the tested CF population as a whole, CFTR gene mutations were found to be the primary determinant of sweat chloride variability (56.1% of variation) with contributions from variation over time (e.g., factors related to testing on different days; 13.8%), environmental factors (e.g., climate, family diet; 13.5%), other residual factors (e.g., test variability; 9.9%), and unique individual factors (e.g., modifier genes, unique exposures; 6.8%) (likelihood ratio test, P < 0.001). Twin analysis suggested that modifier genes did not play a significant role because the heritability estimate was negligible (H2 = 0; 95% confidence interval, 0.0–0.35). For an individual with CF, variation in sweat chloride was primarily caused by variation over time (58.1%) with the remainder attributable to residual/random factors (41.9%). Conclusions: Variation in the CFTR gene is the predominant cause of sweat chloride variation; most of the non-CFTR variation is caused by testing variability and unique environmental factors. If test precision and accuracy can be improved, sweat chloride measurement could be a valuable biomarker

Blast experiments for the derivation of initial cloud dimensions after a ''Dirty Bomb'' event

International Nuclear Information System (INIS)

Thielen, H.; Schroedl, E.

2004-01-01

Basis for the assessment of potential consequences of a ''dirty bomb'' event is the calculation of the atmospheric dispersion of airborne particles. The empirical derivation of parameters for the estimation of the initial pollutant cloud dimensions was the principal purpose for blast experiments performed in the training area Munster in summer 2003 with the participation of several highly engaged German organisations and institutions. The experiments were performed under variation of parameters like mass and kind of explosive, subsurface characteristics or meteorological conditions and were documented by digital video recording. The blasting experiments supplied significant results under reproducible conditions. The initial cloud dimension was primarily influenced by the explosive mass. The influence of other parameters was relatively small and within the range of the experimental uncertainties. Based on these experimental results a new correlation was determined for the empirical estimation of the initial cloud dimensions as a function of explosive mass. The observed initial cloud volumes were more than an order of magnitude smaller than those calculated with other widely-used formulas (e.g. HOTSPOT). As a smaller volume of the initial cloud leads to higher near-ground concentration maxima, our results support an appropriate adjustment of currently employed calculation methods. (orig.)

Natural Genetic Variation and Candidate Genes for Morphological Traits in Drosophila melanogaster

Science.gov (United States)

Carreira, Valeria Paula; Mensch, Julián; Hasson, Esteban; Fanara, Juan José

2016-01-01

Body size is a complex character associated to several fitness related traits that vary within and between species as a consequence of environmental and genetic factors. Latitudinal and altitudinal clines for different morphological traits have been described in several species of Drosophila and previous work identified genomic regions associated with such variation in D. melanogaster. However, the genetic factors that orchestrate morphological variation have been barely studied. Here, our main objective was to investigate genetic variation for different morphological traits associated to the second chromosome in natural populations of D. melanogaster along latitudinal and altitudinal gradients in Argentina. Our results revealed weak clinal signals and a strong population effect on morphological variation. Moreover, most pairwise comparisons between populations were significant. Our study also showed important within-population genetic variation, which must be associated to the second chromosome, as the lines are otherwise genetically identical. Next, we examined the contribution of different candidate genes to natural variation for these traits. We performed quantitative complementation tests using a battery of lines bearing mutated alleles at candidate genes located in the second chromosome and six second chromosome substitution lines derived from natural populations which exhibited divergent phenotypes. Results of complementation tests revealed that natural variation at all candidate genes studied, invected, Fasciclin 3, toucan, Reticulon-like1, jing and CG14478, affects the studied characters, suggesting that they are Quantitative Trait Genes for morphological traits. Finally, the phenotypic patterns observed suggest that different alleles of each gene might contribute to natural variation for morphological traits. However, non-additive effects cannot be ruled out, as wild-derived strains differ at myriads of second chromosome loci that may interact

Variational description of multifluid hydrodynamics: Uncharged fluids

Science.gov (United States)

Prix, Reinhard

2004-02-01

We present a formalism for Newtonian multifluid hydrodynamics derived from an unconstrained variational principle. This approach provides a natural way of obtaining the general equations of motion for a wide range of hydrodynamic systems containing an arbitrary number of interacting fluids and superfluids. In addition to spatial variations we use “time shifts” in the variational principle, which allows us to describe dissipative processes with entropy creation, such as chemical reactions, friction or the effects of external non-conservative forces. The resulting framework incorporates the generalization of the entrainment effect originally discussed in the case of the mixture of two superfluids by Andreev and Bashkin. In addition to the conservation of energy and momentum, we derive the generalized conservation laws of vorticity and helicity, and the special case of Ertel’s theorem for the single perfect fluid. We explicitly discuss the application of this framework to thermally conducting fluids, superfluids, and superfluid neutron star matter. The equations governing thermally conducting fluids are found to be more general than the standard description, as the effect of entrainment usually seems to be overlooked in this context. In the case of superfluid 4He we recover the Landau-Khalatnikov equations of the two-fluid model via a translation to the “orthodox” framework of superfluidity, which is based on a rather awkward choice of variables. Our two-fluid model for superfluid neutron star matter allows for dissipation via mutual friction and also “transfusion” via β reactions between the neutron fluid and the proton-electron fluid.

Orbital Elements and Period Variation of the Eclipsing Binary T LMi

Directory of Open Access Journals (Sweden)

Kyu-Dong Oh

1987-12-01

Full Text Available A photometric solutions of T LMi were derived with derived with the Wilson and Devinney model using the BV photoelectric light curves of Okazaki(1977 and orbital period changes are discussed from the all of the collected times of minima available in the literature. We obtained a variation with a period of 62.y01 and an amplitude of 0.d0425 form the (O-C diagram. According to the physical properties of T LMi on the basis of derived photometric solution, it have a doubt the credibility of the existence of "R CMs type".

Generalized Multiparameters Fractional Variational Calculus

Directory of Open Access Journals (Sweden)

Om Prakash Agrawal

2012-01-01

Full Text Available This paper builds upon our recent paper on generalized fractional variational calculus (FVC. Here, we briefly review some of the fractional derivatives (FDs that we considered in the past to develop FVC. We first introduce new one parameter generalized fractional derivatives (GFDs which depend on two functions, and show that many of the one-parameter FDs considered in the past are special cases of the proposed GFDs. We develop several parts of FVC in terms of one parameter GFDs. We point out how many other parts could be developed using the properties of the one-parameter GFDs. Subsequently, we introduce two new two- and three-parameter GFDs. We introduce some of their properties, and discuss how they can be used to develop FVC. In addition, we indicate how these formulations could be used in various fields, and how the generalizations presented here can be further extended.

Optimization of the variational basis in the three body problem

International Nuclear Information System (INIS)

Simenog, I.V.; Pushkash, O.M.; Bestuzheva, A.B.

1995-01-01

The procedure of variational oscillator basis optimization is proposed to the calculation the energy spectra of three body systems. The hierarchy of basis functions is derived and energies of ground and excited states for three gravitating particles is obtained with high accuracy. 12 refs

Variational discretization of the nonequilibrium thermodynamics of simple systems

Science.gov (United States)

Gay-Balmaz, François; Yoshimura, Hiroaki

2018-04-01

In this paper, we develop variational integrators for the nonequilibrium thermodynamics of simple closed systems. These integrators are obtained by a discretization of the Lagrangian variational formulation of nonequilibrium thermodynamics developed in (Gay-Balmaz and Yoshimura 2017a J. Geom. Phys. part I 111 169–93 Gay-Balmaz and Yoshimura 2017b J. Geom. Phys. part II 111 194–212) and thus extend the variational integrators of Lagrangian mechanics, to include irreversible processes. In the continuous setting, we derive the structure preserving property of the flow of such systems. This property is an extension of the symplectic property of the flow of the Euler–Lagrange equations. In the discrete setting, we show that the discrete flow solution of our numerical scheme verifies a discrete version of this property. We also present the regularity conditions which ensure the existence of the discrete flow. We finally illustrate our discrete variational schemes with the implementation of an example of a simple and closed system.

Hot gauge field properties from the thermal variational principle

International Nuclear Information System (INIS)

Schroeder, Y.; Schulz, H.

1995-10-01

A Feynman-Jensen version of the thermal variational principle is applied to hot gauge fields, abelian as well as nonabelian: scalar electrodynamics (without scalar self-coupling) and the gluon plasma. The perturbatively known self-energies are shown to derive by variation from a free quadratic (''gaussian'') trial Lagrangian. Independence of the covariant gauge fixing parameter is reached (within the order g 2 studies and for scalar ED) after a reformulation of the partition function such that it depends on only even powers of the gauge field. This way, however, the potential non-perturbative power of the calculus seems to be ruined. (orig.)

Derivation of ozone flux-yield relationships for lettuce: A key horticultural crop

Energy Technology Data Exchange (ETDEWEB)

Goumenaki, Eleni [Environmental and Molecular Plant Physiology, Institute for Research on the Environment and Sustainability, School of Biology and Psychology, Division of Biology, Devonshire Building, Newcastle University, Newcastle Upon Tyne NE1 7RU (United Kingdom); School of Agricultural Technology, Technological Education Institute of Crete, P.O. Box 1939, 71004 Heraklion (Greece); Fernandez, Ignacio Gonzalez [Environmental and Molecular Plant Physiology, Institute for Research on the Environment and Sustainability, School of Biology and Psychology, Division of Biology, Devonshire Building, Newcastle University, Newcastle Upon Tyne NE1 7RU (United Kingdom); CIEMAT, Ecotoxicology of Air Pollution, Avda. Complutense 22, 28040 Madrid (Spain); Papanikolaou, Antigoni [School of Agricultural Technology, Technological Education Institute of Crete, P.O. Box 1939, 71004 Heraklion (Greece); Papadopoulou, Despoina [School of Agricultural Technology, Technological Education Institute of Crete, P.O. Box 1939, 71004 Heraklion (Greece); Askianakis, Christos [School of Agricultural Technology, Technological Education Institute of Crete, P.O. Box 1939, 71004 Heraklion (Greece); Kouvarakis, George [Environmental and Chemical Processes Laboratory, Department of Chemistry, University of Crete, P.O. Box 1470, 71409 Heraklion (Greece); Barnes, Jeremy [Environmental and Molecular Plant Physiology, Institute for Research on the Environment and Sustainability, School of Biology and Psychology, Division of Biology, Devonshire Building, Newcastle University, Newcastle Upon Tyne NE1 7RU (United Kingdom)]. E-mail: j.d.barnes@ncl.ac.uk

2007-04-15

Ozone flux-response relationships were derived for lettuce, employing a multiplicative approach to model the manner in which stomatal conductance is influenced by key environmental variables, using a dataset collected during field experimentation in Crete and yield-response relationships derived from parallel open-top chamber experiments. Regional agronomic practices were adopted throughout. Computed versus measured data revealed that the derived model explained 51% (P < 0.001) of the observed variation in stomatal conductance. Concentration-based indices were compared with flux-based indices. Analyses revealed a significant relationship between accumulated stomatal ozone flux and yield employing flux threshold cut-offs up to 4 nmol m{sup -2} s{sup -1}. Regressions employing very low or zero flux thresholds resulted in the strongest yield-flux relationships (explaining {approx}80% (P < 0.05) of the variation in the dataset). - Establishment of ozone flux-yield relationships for a commercially-important horticultural crop grown widely in the Mediterranean.

Price models for oil derivates in Slovenia

International Nuclear Information System (INIS)

Nemac, F.; Saver, A.

1995-01-01

In Slovenia, a law is currently applied according to which any change in the price of oil derivatives is subject to the Governmental approval. Following the target of getting closer to the European Union, the necessity has arisen of finding ways for the introduction of liberalization or automated approach to price modifications depending on oscillations of oil derivative prices on the world market and the rate of exchange of the American dollar. It is for this reason that at the Agency for Energy Restructuring we made a study for the Ministry of Economic Affairs and Development regarding this issue. We analysed the possible models for the formation of oil derivative prices for Slovenia. Based on the assessment of experiences of primarily the west European countries, we proposed three models for the price formation for Slovenia. In future, it is expected that the Government of the Republic of Slovenia will make a selection of one of the proposed models to be followed by enforcement of price liberalization. The paper presents two representative models for price formation as used in Austria and Portugal. In the continuation the authors analyse the application of three models that they find suitable for the use in Slovenia. (author)

X-ray and CT signs of connective tissue dysplasia in patients with primarily diagnosed infiltrative pulmonary tuberculosis

International Nuclear Information System (INIS)

Sukhanova, L.A.; Sharmazanova, O.P.

2009-01-01

The x-ray signs of connective tissue systemic dysplasia (CTSD) in patients with primarily diagnosed pulmonary tuberculosis was investigated. Fifty-four patients (28 med and 26 women aged 18-70) with primarily diagnosed infiltrative pulmonary tuberculosis underwent x-ray study. In patients with infiltration pulmonary tuberculosis CTSD in the lungs manifests by their diminishing, deformity of the lung pattern, high position of the diaphragm cupola, mediastinum shift to the side of the pathology, which is better seen on CT. The degree of CTSD x-ray signs in the lungs depends on the number of phenotypical signs that is the degree of the disease manifestation. CT allows more accurate determining of the signs of connective tissue dysplasia in which tuberculosis develops

Variational Calculation for the Equation of State of Hot Asymmetric Nuclear Matter

International Nuclear Information System (INIS)

Togashi, Hajime; Kanzawa, Hiroaki; Takano, Masatoshi

2010-01-01

We calculate the equation of state (EOS) of asymmetric nuclear matter at finite temperatures with the cluster variational method based on the realistic nuclear Hamiltonian composed of the AV18 and UIX nuclear potentials. The free energy is calculated with an extension of the variational method proposed by Schmidt and Pandharipande. The obtained thermodynamic quantities such as entropy, internal energy, pressure and chemical potential derived from the free energy are reasonable. It is also found that the present variational calculation is self-consistent. These thermodynamic quantities are essential ingredients in our project for constructing a new nuclear EOS applicable to supernova simulations.

Fitness differences due to allelic variation at Esterase-4 Locus in ...

Indian Academy of Sciences (India)

Navya

2017-01-04

Jan 4, 2017 ... specific substrate (1-Naphthylacetate AR) and stain (Fast blue RR). On the basis of ... After 24 hr. each pair was transferred to fresh food vials .... derived from the natural populations harbour allelic variation that affects lifespan.

Variational multiscale models for charge transport.

Science.gov (United States)

Wei, Guo-Wei; Zheng, Qiong; Chen, Zhan; Xia, Kelin

2012-01-01

This work presents a few variational multiscale models for charge transport in complex physical, chemical and biological systems and engineering devices, such as fuel cells, solar cells, battery cells, nanofluidics, transistors and ion channels. An essential ingredient of the present models, introduced in an earlier paper (Bulletin of Mathematical Biology, 72, 1562-1622, 2010), is the use of differential geometry theory of surfaces as a natural means to geometrically separate the macroscopic domain from the microscopic domain, meanwhile, dynamically couple discrete and continuum descriptions. Our main strategy is to construct the total energy functional of a charge transport system to encompass the polar and nonpolar free energies of solvation, and chemical potential related energy. By using the Euler-Lagrange variation, coupled Laplace-Beltrami and Poisson-Nernst-Planck (LB-PNP) equations are derived. The solution of the LB-PNP equations leads to the minimization of the total free energy, and explicit profiles of electrostatic potential and densities of charge species. To further reduce the computational complexity, the Boltzmann distribution obtained from the Poisson-Boltzmann (PB) equation is utilized to represent the densities of certain charge species so as to avoid the computationally expensive solution of some Nernst-Planck (NP) equations. Consequently, the coupled Laplace-Beltrami and Poisson-Boltzmann-Nernst-Planck (LB-PBNP) equations are proposed for charge transport in heterogeneous systems. A major emphasis of the present formulation is the consistency between equilibrium LB-PB theory and non-equilibrium LB-PNP theory at equilibrium. Another major emphasis is the capability of the reduced LB-PBNP model to fully recover the prediction of the LB-PNP model at non-equilibrium settings. To account for the fluid impact on the charge transport, we derive coupled Laplace-Beltrami, Poisson-Nernst-Planck and Navier-Stokes equations from the variational principle

Variational multiscale models for charge transport

Science.gov (United States)

Wei, Guo-Wei; Zheng, Qiong; Chen, Zhan; Xia, Kelin

2012-01-01

This work presents a few variational multiscale models for charge transport in complex physical, chemical and biological systems and engineering devices, such as fuel cells, solar cells, battery cells, nanofluidics, transistors and ion channels. An essential ingredient of the present models, introduced in an earlier paper (Bulletin of Mathematical Biology, 72, 1562-1622, 2010), is the use of differential geometry theory of surfaces as a natural means to geometrically separate the macroscopic domain from the microscopic domain, meanwhile, dynamically couple discrete and continuum descriptions. Our main strategy is to construct the total energy functional of a charge transport system to encompass the polar and nonpolar free energies of solvation, and chemical potential related energy. By using the Euler-Lagrange variation, coupled Laplace-Beltrami and Poisson-Nernst-Planck (LB-PNP) equations are derived. The solution of the LB-PNP equations leads to the minimization of the total free energy, and explicit profiles of electrostatic potential and densities of charge species. To further reduce the computational complexity, the Boltzmann distribution obtained from the Poisson-Boltzmann (PB) equation is utilized to represent the densities of certain charge species so as to avoid the computationally expensive solution of some Nernst-Planck (NP) equations. Consequently, the coupled Laplace-Beltrami and Poisson-Boltzmann-Nernst-Planck (LB-PBNP) equations are proposed for charge transport in heterogeneous systems. A major emphasis of the present formulation is the consistency between equilibrium LB-PB theory and non-equilibrium LB-PNP theory at equilibrium. Another major emphasis is the capability of the reduced LB-PBNP model to fully recover the prediction of the LB-PNP model at non-equilibrium settings. To account for the fluid impact on the charge transport, we derive coupled Laplace-Beltrami, Poisson-Nernst-Planck and Navier-Stokes equations from the variational principle

VARIATIONAL PRINCIPLES FOR NONLOCAL CONTINUUM MODEL OF ORTHOTROPIC GRAPHENE SHEETS EMBEDDED IN AN ELASTIC MEDIUM

Institute of Scientific and Technical Information of China (English)

Sarp Adali

2012-01-01

Equations governing the vibrations and buckling of multilayered orthotropic graphene sheets can be expressed as a system of n partial differential equations where n refers to the number of sheets.This description is based on the continuum model of the graphene sheets which can also take the small scale effects into account by employing a nonlocal theory.In the present article a variational principle is derived for the nonlocal elastic theory of rectangular graphene sheets embedded in an elastic medium and undergoing transverse vibrations.Moreover the graphene sheets are subject to biaxial compression.Rayleigh quotients are obtained for the frequencies of freely vibrating graphene sheets and for the buckling load. The influence of small scale effects on the frequencies and the buckling load can be observed qualiatively from the expressions of the Rayleigh quotients.Elastic medium is modeled as a combination of Winkler and Pasternak foundations acting on the top and bottom layers of the mutilayered nano-structure.Natural boundary conditions of the problem are derived using the variational principle formulated in the study.It is observed that free boundaries lead to coupled boundary conditions due to nonlocal theory used in the continuum formulation while the local (classical) elasticity theory leads to uncoupled boundary conditions.The mathematical methods used in the study involve calculus of variations and the semi-inverse method for deriving the variational integrals.

Waveform inversion of lateral velocity variation from wavefield source location perturbation

KAUST Repository

Choi, Yun Seok; Alkhalifah, Tariq Ali

2013-01-01

It is challenge in waveform inversion to precisely define the deep part of the velocity model compared to the shallow part. The lateral velocity variation, or what referred to as the derivative of velocity with respect to the horizontal distance

Reaction of formaldehyde with phenols: a computational chemistry study.

Science.gov (United States)

Tohru Mitsunaga; Anthony H. Conner; Charles G. Hill

2001-01-01

Phenolic resins are important adhesives used by the forest products industry. The phenolic compounds in these resins are derived primarily from petrochemical sources. Alternate sources of phenolic compounds include tannins, lignins, biomass pyrolysis products, and coal gasification products. Because of variations in their chemical structures, the reactivities of these...

Using spectral element method to solve variational inequalities with applications in finance

International Nuclear Information System (INIS)

Moradipour, M.; Yousefi, S.A.

2015-01-01

Under the Black–Scholes model, the value of an American option solves a time dependent variational inequality problem (VIP). In this paper, first we discretize the variational inequality of American option in temporal direction by applying the Rannacher time stepping and achieve a sequence of elliptic variational inequalities. Second we discretize the spatial domain of variational inequalities by using spectral element methods with high order Lagrangian polynomials introduced on Gauss–Legendre–Lobatto points. Also by computing integrals by the Gauss–Legendre–Lobatto quadrature rule we derive a sequence of the linear complementarity problems (LCPs) having a positive definite sparse coefficient matrix. To find the unique solutions of the LCPs, we use the projected successive over-relaxation (PSOR) algorithm. Furthermore we present some existence and uniqueness theorems for the variational inequalities and LCPs. Finally, theoretical results are verified on the relevant numerical examples.

Entropy, extremality, euclidean variations, and the equations of motion

Science.gov (United States)

Dong, Xi; Lewkowycz, Aitor

2018-01-01

We study the Euclidean gravitational path integral computing the Rényi entropy and analyze its behavior under small variations. We argue that, in Einstein gravity, the extremality condition can be understood from the variational principle at the level of the action, without having to solve explicitly the equations of motion. This set-up is then generalized to arbitrary theories of gravity, where we show that the respective entanglement entropy functional needs to be extremized. We also extend this result to all orders in Newton's constant G N , providing a derivation of quantum extremality. Understanding quantum extremality for mixtures of states provides a generalization of the dual of the boundary modular Hamiltonian which is given by the bulk modular Hamiltonian plus the area operator, evaluated on the so-called modular extremal surface. This gives a bulk prescription for computing the relative entropies to all orders in G N . We also comment on how these ideas can be used to derive an integrated version of the equations of motion, linearized around arbitrary states.

Modeling per capita state health expenditure variation: state-level characteristics matter.

Science.gov (United States)

Cuckler, Gigi; Sisko, Andrea

2013-01-01

In this paper, we describe the methods underlying the econometric model developed by the Office of the Actuary in the Centers for Medicare & Medicaid Services, to explain differences in per capita total personal health care spending by state, as described in Cuckler, et al. (2011). Additionally, we discuss many alternative model specifications to provide additional insights for valid interpretation of the model. We study per capita personal health care spending as measured by the State Health Expenditures, by State of Residence for 1991-2009, produced by the Centers for Medicare & Medicaid Services' Office of the Actuary. State-level demographic, health status, economic, and health economy characteristics were gathered from a variety of U.S. government sources, such as the Census Bureau, Bureau of Economic Analysis, the Centers for Disease Control, the American Hospital Association, and HealthLeaders-InterStudy. State-specific factors, such as income, health care capacity, and the share of elderly residents, are important factors in explaining the level of per capita personal health care spending variation among states over time. However, the slow-moving nature of health spending per capita and close relationships among state-level factors create inefficiencies in modeling this variation, likely resulting in incorrectly estimated standard errors. In addition, we find that both pooled and fixed effects models primarily capture cross-sectional variation rather than period-specific variation.

Global Electric Circuit Diurnal Variation Derived from Storm Overflight and Satellite Optical Lightning Datasets

Science.gov (United States)

Mach, Douglas M.; Blakeslee, R. J.; Bateman, M. J.; Bailey, J. C.

2011-01-01

We have combined analyses of over 1000 high altitude aircraft observations of electrified clouds with diurnal lightning statistics from the Lightning Imaging Sensor (LIS) and Optical Transient Detector (OTD) to produce an estimate of the diurnal variation in the global electric circuit. Using basic assumptions about the mean storm currents as a function of flash rate and location, and the global electric circuit, our estimate of the current in the global electric circuit matches the Carnegie curve diurnal variation to within 4% for all but two short periods of time. The agreement with the Carnegie curve was obtained without any tuning or adjustment of the satellite or aircraft data. Mean contributions to the global electric circuit from land and ocean thunderstorms are 1.1 kA (land) and 0.7 kA (ocean). Contributions to the global electric circuit from ESCs are 0.22 kA for ocean storms and 0.04 kA for land storms. Using our analysis, the mean total conduction current for the global electric circuit is 2.0 kA.

Patterns of variation across primates in jaw-muscle electromyography during mastication.

Science.gov (United States)

Vinyard, Christopher J; Wall, Christine E; Williams, Susan H; Hylander, William L

2008-08-01

Biologists that study mammals continue to discuss the evolution of and functional variation in jaw-muscle activity during chewing. A major barrier to addressing these issues is collecting sufficient in vivo data to adequately capture neuromuscular variation in a clade. We combine data on jaw-muscle electromyography (EMG) collected during mastication from 14 species of primates and one of treeshrews to assess patterns of neuromuscular variation in primates. All data were collected and analyzed using the same methods. We examine the variance components for EMG parameters using a nested ANOVA design across successive hierarchical factors from chewing cycle through species for eight locations in the masseter and temporalis muscles. Variation in jaw-muscle EMGs was not distributed equally across hierarchical levels. The timing of peak EMG activity showed the largest variance components among chewing cycles. Relative levels of recruitment of jaw muscles showed the largest variance components among chewing sequences and cycles. We attribute variation among chewing cycles to (1) changes in food properties throughout the chewing sequence, (2) variation in bite location, and (3) the multiple ways jaw muscles can produce submaximal bite forces. We hypothesize that variation among chewing sequences is primarily related to variation in properties of food. The significant proportion of variation in EMGs potentially linked to food properties suggests that experimental biologists must pay close attention to foods given to research subjects in laboratory-based studies of feeding. The jaw muscles exhibit markedly different variance components among species suggesting that primate jaw muscles have evolved as distinct functional units. The balancing-side deep masseter (BDM) exhibits the most variation among species. This observation supports previous hypotheses linking variation in the timing and activation of the BDM to symphyseal fusion in anthropoid primates and in strepsirrhines

Midlatitude D region variations measured from broadband radio atmospherics

Science.gov (United States)

Han, Feng

The high power, broadband very low frequency (VLF, 3--30 kHz) and extremely low frequency (ELF, 3--3000 Hz) electromagnetic waves generated by lightning discharges and propagating in the Earth-ionosphere waveguide can be used to measure the average electron density profile of the lower ionosphere (D region) across the wave propagation path due to several reflections by the upper boundary (lower ionosphere) of the waveguide. This capability makes it possible to frequently and even continuously monitor the D region electron density profile variations over geographically large regions, which are measurements that are essentially impossible by other means. These guided waves, usually called atmospherics (or sferics for short), are recorded by our sensors located near Duke University. The purpose of this work is to develop and implement algorithms to derive the variations of D region electron density profile which is modeled by two parameters (one is height and another is sharpness), by comparing the recorded sferic spectra to a series of model simulated sferic spectra from using a finite difference time domain (FDTD) code. In order to understand the time scales, magnitudes and sources for the midlatitude nighttime D region variations, we analyzed the sferic data of July and August 2005, and extracted both the height and sharpness of the D region electron density profile. The heights show large temporal variations of several kilometers on some nights and the relatively stable behavior on others. Statistical calculations indicate that the hourly average heights during the two months range between 82.0 km and 87.2 km with a mean value of 84.9 km and a standard deviation of 1.1 km. We also observed spatial variations of height as large as 2.0 km over 5 degrees latitudes on some nights, and no spatial variation on others. In addition, the measured height variations exhibited close correlations with local lightning occurrence rate on some nights but no correlation with local

Self-consistent field variational cellular method as applied to the band structure calculation of sodium

International Nuclear Information System (INIS)

Lino, A.T.; Takahashi, E.K.; Leite, J.R.; Ferraz, A.C.

1988-01-01

The band structure of metallic sodium is calculated, using for the first time the self-consistent field variational cellular method. In order to implement the self-consistency in the variational cellular theory, the crystal electronic charge density was calculated within the muffin-tin approximation. The comparison between our results and those derived from other calculations leads to the conclusion that the proposed self-consistent version of the variational cellular method is fast and accurate. (author) [pt

Low complexity variational bayes iterative reviver for MIMO-OFDM systems

DEFF Research Database (Denmark)

Xiong, Chunlin; Wang, Hua; Zhang, Xiaoying

2009-01-01

A low complexity iterative receiver is proposed in this paper for MIMO-OFDM systems in time-varying multi-path channel based on the variational Bayes (VB) method. According to the VB method, the estimation algorithms of the signal distribution and the channel distribution are derived for the rece...

VarioML framework for comprehensive variation data representation and exchange.

Science.gov (United States)

Byrne, Myles; Fokkema, Ivo Fac; Lancaster, Owen; Adamusiak, Tomasz; Ahonen-Bishopp, Anni; Atlan, David; Béroud, Christophe; Cornell, Michael; Dalgleish, Raymond; Devereau, Andrew; Patrinos, George P; Swertz, Morris A; Taschner, Peter Em; Thorisson, Gudmundur A; Vihinen, Mauno; Brookes, Anthony J; Muilu, Juha

2012-10-03

Sharing of data about variation and the associated phenotypes is a critical need, yet variant information can be arbitrarily complex, making a single standard vocabulary elusive and re-formatting difficult. Complex standards have proven too time-consuming to implement. The GEN2PHEN project addressed these difficulties by developing a comprehensive data model for capturing biomedical observations, Observ-OM, and building the VarioML format around it. VarioML pairs a simplified open specification for describing variants, with a toolkit for adapting the specification into one's own research workflow. Straightforward variant data can be captured, federated, and exchanged with no overhead; more complex data can be described, without loss of compatibility. The open specification enables push-button submission to gene variant databases (LSDBs) e.g., the Leiden Open Variation Database, using the Cafe Variome data publishing service, while VarioML bidirectionally transforms data between XML and web-application code formats, opening up new possibilities for open source web applications building on shared data. A Java implementation toolkit makes VarioML easily integrated into biomedical applications. VarioML is designed primarily for LSDB data submission and transfer scenarios, but can also be used as a standard variation data format for JSON and XML document databases and user interface components. VarioML is a set of tools and practices improving the availability, quality, and comprehensibility of human variation information. It enables researchers, diagnostic laboratories, and clinics to share that information with ease, clarity, and without ambiguity.

A Variational Model for Two-Phase Immiscible Electroosmotic Flow at Solid Surfaces

KAUST Repository

Shao, Sihong; Qian, Tiezheng

2012-01-01

We develop a continuum hydrodynamic model for two-phase immiscible flows that involve electroosmotic effect in an electrolyte and moving contact line at solid surfaces. The model is derived through a variational approach based on the Onsager

Genomic Sequence Variation Markup Language (GSVML).

Science.gov (United States)

Nakaya, Jun; Kimura, Michio; Hiroi, Kaei; Ido, Keisuke; Yang, Woosung; Tanaka, Hiroshi

2010-02-01

With the aim of making good use of internationally accumulated genomic sequence variation data, which is increasing rapidly due to the explosive amount of genomic research at present, the development of an interoperable data exchange format and its international standardization are necessary. Genomic Sequence Variation Markup Language (GSVML) will focus on genomic sequence variation data and human health applications, such as gene based medicine or pharmacogenomics. We developed GSVML through eight steps, based on case analysis and domain investigations. By focusing on the design scope to human health applications and genomic sequence variation, we attempted to eliminate ambiguity and to ensure practicability. We intended to satisfy the requirements derived from the use case analysis of human-based clinical genomic applications. Based on database investigations, we attempted to minimize the redundancy of the data format, while maximizing the data covering range. We also attempted to ensure communication and interface ability with other Markup Languages, for exchange of omics data among various omics researchers or facilities. The interface ability with developing clinical standards, such as the Health Level Seven Genotype Information model, was analyzed. We developed the human health-oriented GSVML comprising variation data, direct annotation, and indirect annotation categories; the variation data category is required, while the direct and indirect annotation categories are optional. The annotation categories contain omics and clinical information, and have internal relationships. For designing, we examined 6 cases for three criteria as human health application and 15 data elements for three criteria as data formats for genomic sequence variation data exchange. The data format of five international SNP databases and six Markup Languages and the interface ability to the Health Level Seven Genotype Model in terms of 317 items were investigated. GSVML was developed as

Diurnal variations of tritium uptake by plants

International Nuclear Information System (INIS)

Hettinger, M.; Diabate, S.; Strack, S.

1991-02-01

The influence of the diurnal cycle is important for the behaviour of environmental tritium in the vegetation. A mathematical model has been used to calculate the deposition of tritium in plants as a function of diurnal variations of climatic parameters. The necessary physiological parameters (relationship of net photosynthesis and growth) were derived from growth experiments for tomatoes and maize. In chamber experiments, tomato and maize plants were exposed to tritium with natural diurnal variations of the climatic conditions. Within the range of standard deviations the measured concentrations of tritium in tissue free water of tomatoes correspond well to the estimated values. Furthermore, the incorporation into non-exchangeable organically bound tritium (OBT nx) can be sufficiently modelled and explained. There are deviations from the estimated concentrations in some parts of maize leaves. (orig.) [de

Natural spatial and temporal variations in groundwater chemistry in fractured, sedimentary rocks: scale and implications for solute transport

International Nuclear Information System (INIS)

Hoven, Stephen J. van der; Kip Solomon, D.; Moline, Gerilynn R.

2005-01-01

Natural tracers (major ions, δ 18 O, and O 2 ) were monitored to evaluate groundwater flow and transport to a depth of 20 m below the surface in fractured sedimentary (primarily shale and limestone) rocks. Large temporal variations in these tracers were noted in the soil zone and the saprolite, and are driven primarily by individual storm events. During nonstorm periods, an upward flow brings water with high TDS, constant δ 18 O, and low dissolved O 2 to the water table. During storm events, low TDS, variable δ 18 O, and high dissolved O 2 water recharges through the unsaturated zone. These oscillating signals are rapidly transmitted along fracture pathways in the saprolite, with changes occurring on spatial scales of several meters and on a time scale of hours. The variations decreased markedly below the boundary between the saprolite and less weathered bedrock. Variations in the bedrock units occurred on time scales of days and spatial scales of at least 20 m. The oscillations of chemical conditions in the shallow groundwater are hypothesized to have significant implications for solute transport. Solutes and colloids that adsorb onto aquifer solids can be released into solution by decreases in ionic strength and pH. The decreases in ionic strength also cause thermodynamic undersaturation of the groundwater with respect to some mineral species and may result in mineral dissolution. Redox conditions are also changing and may result in mineral dissolution/precipitation. The net result of these chemical variations is episodic transport of a wide range of dissolved solutes or suspended particles, a phenomenon rarely considered in contaminant transport studies

Improving the variational path integral approach to the quantum double-well potential

International Nuclear Information System (INIS)

Bao Jingdong; Wang Hongyu

2002-01-01

An improved variational path integral approach is developed and applied to the quantum double-well potential, in which part of the quartic term of the potential is included in the trial action. The expression of the effective classical potential (ECP) under a non-Gaussian expectation is obtained. Here the frequency and fourth-order derivative of the potential are treated as two variational parameters, determined by the minimization of the ECP at each point. We calculate the ECP, the free energy and the level splitting of a symmetrical double-well potential. It is shown that the present results are better than those of the Feynman-Kleinert Gaussian variational method. (author)

Evaluation of a dental pulp-derived cell sheet cultured on amniotic membrane substrate.

Science.gov (United States)

Honjo, Ken-ichi; Yamamoto, Toshiro; Adachi, Tetsuya; Amemiya, Takeshi; Mazda, Osam; Kanamura, Narisato; Kita, Masakazu

2015-01-01

Mesenchymal stem cells (MSC) are transplanted for periodontal tissue regeneration, and the periodontal ligament (PDL) is regenerated using a cultured cell sheet. This cultured cell sheet is prepared using PDL-derived cells, growth factors, and amniotic membrane (AM). Dental pulp (DP)-derived cells can be easily obtained from extracted wisdom teeth, proliferate rapidly, and are less susceptible to bacterial infection than PDL-derived cells. Thus, to prepare a novel cell sheet, DP-derived cells were cultured on AM as a culture substrate for immunohistochemical examination. Wisdom teeth extracted from three adults were cut along the cement-enamel border. DP tissue was collected, minced, and primarily cultured. After three or four passage cultures, DP-derived cells were cultured on AM, followed by hematoxylin-eosin (H-E) and immunofluorescence staining. DP-derived cells cultured on AM formed a layered structure. Cells positive for vimentin, Ki-67, ZO-1, desmoplakin, CD29, 44, 105 or 146, STRO-1, collagen IV or VII or laminin 5 or α5 chain were localized. DP-derived cells proliferated on AM, while retaining the properties of DP, which allowed the cultured cell sheet to be prepared. In addition, the cultured cell sheet contained MSC, which suggests its potential application in periodontal tissue regeneration.

Long-term mass variations from SLR, VLBI and GPS data

Science.gov (United States)

Luceri, Vincenza; Sciarretta, Cecilia; Bianco, Giuseppe

2013-04-01

The second-degree geopotential coefficients reflect the behaviour of the Earth's inertia tensor of order 2 which describes the main mass variations of our planet impacting polar motion and length of day (EOP). SLR, VLBI and GPS allow the estimation of those variations, either directly in the case of SLR through its dynamics, and indirectly, for all the three geodetic techniques, by deriving excitation functions from the EOP estimations. The geodetic estimates include the influence of the Earth's atmosphere and oceans, both from their mass and motion components, which can be modelled using the atmospheric and oceanic angular momenta variations. The different C21, S21 and C20 geodetic time series are compared in order to evaluate their coherence and their response to the mass variations after the removal of the motion terms. Moreover, the residual signal contents of the geodetic values, deprived by the atmospheric and oceanic mass and motion components, will be investigated.

Global biogeographical pattern of ecosystem functional types derived from earth observation data

DEFF Research Database (Denmark)

Ivits, Eva; Cherlet, Michael; Horion, Stéphanie Marie Anne F

2013-01-01

correspondence of the EFTs to global climate and also to land use classification. The results show the great potential of Earth Observation derived parameters for the quantification of ecosystem functional dynamics and for providing reference status information for future assessments of ecosystem changes........ The association of the EFTs with existing climate and land cover classifications was demonstrated via Detrended Correspondence Analysis (DCA). The ordination indicated good description of the global environmental gradient by the EFTs, supporting the understanding of phenological and productivity dynamics...... of global ecosystems. Climatic constraints of vegetation growth explained 50% of variation in the phenological data along the EFTs showing that part of the variation in the global phenological gradient is not climate related but is unique to the Earth Observation derived variables. DCA demonstrated good...

Four marine-derived fungi for bioremediation of raw textile mill effluents

Digital Repository Service at National Institute of Oceanography (India)

Verma, A; Raghukumar, C.; Verma, P.; Shouche, Y.S.; Naik, C.G.

microorganisms and high dilutions. We report here decolorization and detoxification of two raw textile effluents, with extreme variations in their pH and dye composition, used at 20-90% concentrations by each of the four marine-derived fungi. Textile effluent A...

A conformal gauge invariant functional for Weyl structures and the first variation formula

OpenAIRE

Ichiyama, Toshiyuki; Furuhata, Hitoshi; Urakawa, Hajime

1999-01-01

We consider a new conformal gauge invariant functional which is a natural curvature functional on the space of Weyl structures. We derive the first variation formula of its functional and characterize its critical points.

An investigation into the use of calculating the first derivative of absorbance spectra as a tool for forensic fibre analysis.

Science.gov (United States)

Wiggins, K; Palmer, R; Hutchinson, W; Drummond, P

2007-05-01

A range of fibre samples was measured using J&M MSP400 and J&M MSP800 microspectrophotometers across the visible and UV/visible wavelength ranges respectively. The first derivative of the absorbance spectra was then calculated and studied. When the absorbance spectra produced for some samples were broad and featureless, the first derivative spectra provided more points of comparison that facilitated discrimination. For many of the samples, calculating the first derivative did not result in any additional discrimination due to the high number of points of comparison present in the absorbance spectra. However, for the samples that exhibited a high level of intra-sample colour variation (e.g. through uneven dye uptake common in cotton and wool, etc.), which was evident in the absorbance spectra, the associated first derivative spectra highlighted this variation between the fibres and could potentially have resulted in false exclusions. The results show that whilst calculating first derivative can be a useful aid in the comparison of spectra, a high degree of caution is required when applying this method to fibres which exhibit a large intra-sample variation in colour.

Anastomotic leak after colorectal resection: A population-based study of risk factors and hospital variation.

Science.gov (United States)

Nikolian, Vahagn C; Kamdar, Neil S; Regenbogen, Scott E; Morris, Arden M; Byrn, John C; Suwanabol, Pasithorn A; Campbell, Darrell A; Hendren, Samantha

2017-06-01

Anastomotic leak is a major source of morbidity in colorectal operations and has become an area of interest in performance metrics. It is unclear whether anastomotic leak is associated primarily with surgeons' technical performance or explained better by patient characteristics and institutional factors. We sought to establish if anastomotic leak could serve as a valid quality metric in colorectal operations by evaluating provider variation after adjusting for patient factors. We performed a retrospective cohort study of colorectal resection patients in the Michigan Surgical Quality Collaborative. Clinically relevant patient and operative factors were tested for association with anastomotic leak. Hierarchical logistic regression was used to derive risk-adjusted rates of anastomotic leak. Of 9,192 colorectal resections, 244 (2.7%) had a documented anastomotic leak. The incidence of anastomotic leak was 3.0% for patients with pelvic anastomoses and 2.5% for those with intra-abdominal anastomoses. Multivariable analysis showed that a greater operative duration, male sex, body mass index >30 kg/m 2 , tobacco use, chronic immunosuppressive medications, thrombocytosis (platelet count >400 × 10 9 /L), and urgent/emergency operations were independently associated with anastomotic leak (C-statistic = 0.75). After accounting for patient and procedural risk factors, 5 hospitals had a significantly greater incidence of postoperative anastomotic leak. This population-based study shows that risk factors for anastomotic leak include male sex, obesity, tobacco use, immunosuppression, thrombocytosis, greater operative duration, and urgent/emergency operation; models including these factors predict most of the variation in anastomotic leak rates. This study suggests that anastomotic leak can serve as a valid metric that can identify opportunities for quality improvement. Copyright © 2017 Elsevier Inc. All rights reserved.

Heat source reconstruction from noisy temperature fields using an optimised derivative Gaussian filter

Science.gov (United States)

Delpueyo, D.; Balandraud, X.; Grédiac, M.

2013-09-01

The aim of this paper is to present a post-processing technique based on a derivative Gaussian filter to reconstruct heat source fields from temperature fields measured by infrared thermography. Heat sources can be deduced from temperature variations thanks to the heat diffusion equation. Filtering and differentiating are key-issues which are closely related here because the temperature fields which are processed are unavoidably noisy. We focus here only on the diffusion term because it is the most difficult term to estimate in the procedure, the reason being that it involves spatial second derivatives (a Laplacian for isotropic materials). This quantity can be reasonably estimated using a convolution of the temperature variation fields with second derivatives of a Gaussian function. The study is first based on synthetic temperature variation fields corrupted by added noise. The filter is optimised in order to reconstruct at best the heat source fields. The influence of both the dimension and the level of a localised heat source is discussed. Obtained results are also compared with another type of processing based on an averaging filter. The second part of this study presents an application to experimental temperature fields measured with an infrared camera on a thin plate in aluminium alloy. Heat sources are generated with an electric heating patch glued on the specimen surface. Heat source fields reconstructed from measured temperature fields are compared with the imposed heat sources. Obtained results illustrate the relevancy of the derivative Gaussian filter to reliably extract heat sources from noisy temperature fields for the experimental thermomechanics of materials.

Geographical variation in egg mass and egg content in a passerine bird.

Directory of Open Access Journals (Sweden)

Suvi Ruuskanen

Full Text Available Reproductive, phenotypic and life-history traits in many animal and plant taxa show geographic variation, indicating spatial variation in selection regimes. Maternal deposition to avian eggs, such as hormones, antibodies and antioxidants, critically affect development of the offspring, with long-lasting effects on the phenotype and fitness. Little is however known about large-scale geographical patterns of variation in maternal deposition to eggs. We studied geographical variation in egg components of a passerine bird, the pied flycatcher (Ficedula hypoleuca, by collecting samples from 16 populations and measuring egg and yolk mass, albumen lysozyme activity, yolk immunoglobulins, yolk androgens and yolk total carotenoids. We found significant variation among populations in most egg components, but ca. 90% of the variation was among individuals within populations. Population however explained 40% of the variation in carotenoid levels. In contrast to our hypothesis, we found geographical trends only in carotenoids, but not in any of the other egg components. Our results thus suggest high within-population variation and leave little scope for local adaptation and genetic differentiation in deposition of different egg components. The role of these maternally-derived resources in evolutionary change should be further investigated.

Whole exome sequencing of wild-derived inbred strains of mice improves power to link phenotype and genotype.

Science.gov (United States)

Chang, Peter L; Kopania, Emily; Keeble, Sara; Sarver, Brice A J; Larson, Erica; Orth, Annie; Belkhir, Khalid; Boursot, Pierre; Bonhomme, François; Good, Jeffrey M; Dean, Matthew D

2017-10-01

The house mouse is a powerful model to dissect the genetic basis of phenotypic variation, and serves as a model to study human diseases. Despite a wealth of discoveries, most classical laboratory strains have captured only a small fraction of genetic variation known to segregate in their wild progenitors, and existing strains are often related to each other in complex ways. Inbred strains of mice independently derived from natural populations have the potential to increase power in genetic studies with the addition of novel genetic variation. Here, we perform exome-enrichment and high-throughput sequencing (~8× coverage) of 26 wild-derived strains known in the mouse research community as the "Montpellier strains." We identified 1.46 million SNPs in our dataset, approximately 19% of which have not been detected from other inbred strains. This novel genetic variation is expected to contribute to phenotypic variation, as they include 18,496 nonsynonymous variants and 262 early stop codons. Simulations demonstrate that the higher density of genetic variation in the Montpellier strains provides increased power for quantitative genetic studies. Inasmuch as the power to connect genotype to phenotype depends on genetic variation, it is important to incorporate these additional genetic strains into future research programs.

Evaluation of methods to determine the spectral variations of aerosol optical thickness

Digital Repository Service at National Institute of Oceanography (India)

Suresh, T.; Talaulikar, M.; Rodrigues, A.; Desa, E.; Chauhan, P.

The methods used to derive spectral variations of aerosol optical thickness, AOT are evaluated. For our analysis we have used the AOT measured using a hand held sunphotometer at the coastal station on the west coast of India, Dona-Paula, Goa...

Stochastic Variational Learning in Recurrent Spiking Networks

Directory of Open Access Journals (Sweden)

Danilo eJimenez Rezende

2014-04-01

Full Text Available The ability to learn and perform statistical inference with biologically plausible recurrent network of spiking neurons is an important step towards understanding perception and reasoning. Here we derive and investigate a new learning rule for recurrent spiking networks with hidden neurons, combining principles from variational learning and reinforcement learning. Our network defines a generative model over spike train histories and the derived learning rule has the form of a local Spike Timing Dependent Plasticity rule modulated by global factors (neuromodulators conveying information about ``novelty on a statistically rigorous ground.Simulations show that our model is able to learn bothstationary and non-stationary patterns of spike trains.We also propose one experiment that could potentially be performed with animals in order to test the dynamics of the predicted novelty signal.

Stochastic variational learning in recurrent spiking networks.

Science.gov (United States)

Jimenez Rezende, Danilo; Gerstner, Wulfram

2014-01-01

The ability to learn and perform statistical inference with biologically plausible recurrent networks of spiking neurons is an important step toward understanding perception and reasoning. Here we derive and investigate a new learning rule for recurrent spiking networks with hidden neurons, combining principles from variational learning and reinforcement learning. Our network defines a generative model over spike train histories and the derived learning rule has the form of a local Spike Timing Dependent Plasticity rule modulated by global factors (neuromodulators) conveying information about "novelty" on a statistically rigorous ground. Simulations show that our model is able to learn both stationary and non-stationary patterns of spike trains. We also propose one experiment that could potentially be performed with animals in order to test the dynamics of the predicted novelty signal.

Commodity derivatives pricing with inventory effects

DEFF Research Database (Denmark)

Bach, Christian; Dziubinski, Matt P.

We introduce tractable models for commodity derivatives pricing with inventory and volatility eects, and illustrate with applications to the oil market. We contribute to the existing literature in several respects. First, whereas the previous literature uses futures data for investigating...... the relationship between inventory and volatility, we use the information available in options traded on futures. Second, performance assessment in the previous literature has primarily evolved around explaining moments of data or forecasting prices of futures. Instead, we asses the performance of our model...... by considering both the ability of explaining prices in-sample and out-of-sample - assessing both the pricing-performance and the hedging-performance of the models. Third, we model the futures surface rather than the spot price process, and from the no-arbitrage relationship between spot and futures prices we...

A Variation on Uncertainty Principle and Logarithmic Uncertainty Principle for Continuous Quaternion Wavelet Transforms

Directory of Open Access Journals (Sweden)

Mawardi Bahri

2017-01-01

Full Text Available The continuous quaternion wavelet transform (CQWT is a generalization of the classical continuous wavelet transform within the context of quaternion algebra. First of all, we show that the directional quaternion Fourier transform (QFT uncertainty principle can be obtained using the component-wise QFT uncertainty principle. Based on this method, the directional QFT uncertainty principle using representation of polar coordinate form is easily derived. We derive a variation on uncertainty principle related to the QFT. We state that the CQWT of a quaternion function can be written in terms of the QFT and obtain a variation on uncertainty principle related to the CQWT. Finally, we apply the extended uncertainty principles and properties of the CQWT to establish logarithmic uncertainty principles related to generalized transform.

Variational principles for locally variational forms

International Nuclear Information System (INIS)

Brajercik, J.; Krupka, D.

2005-01-01

We present the theory of higher order local variational principles in fibered manifolds, in which the fundamental global concept is a locally variational dynamical form. Any two Lepage forms, defining a local variational principle for this form, differ on intersection of their domains, by a variationally trivial form. In this sense, but in a different geometric setting, the local variational principles satisfy analogous properties as the variational functionals of the Chern-Simons type. The resulting theory of extremals and symmetries extends the first order theories of the Lagrange-Souriau form, presented by Grigore and Popp, and closed equivalents of the first order Euler-Lagrange forms of Hakova and Krupkova. Conceptually, our approach differs from Prieto, who uses the Poincare-Cartan forms, which do not have higher order global analogues

Climatic influence in NRM and 10 Be-derived geomagnetic paleointensity data

NARCIS (Netherlands)

1999-01-01

One can determine geomagnetic paleointensities from natural remanent magnetizations (NRM) and by inverting production rates of cosmogenic isotopes such as 10 Be and 14 C. Recently, two independently derived 200-kyr stacks [Y. Guyodo, J.-P. Valet, Relative variations in geomagnetic intensity from

Variational Framework for Non-Local Inpainting

Directory of Open Access Journals (Sweden)

Vadim Fedorov

2015-12-01

Full Text Available Image inpainting aims to obtain a visually plausible image interpolation in a region of the image in which data is missing due to damage or occlusion. Usually, the only available information is the portion of the image outside the inpainting domain. Besides its numerous applications,the inpainting problem is of theoretical interest since its analysis involves an understanding of the self-similarity present in natural images. In this work, we present a detailed description and implementation of three exemplar-based inpainting methods derived from the variational framework introduced by Arias et al.

Variation of Polyphenols and Betaines in Aerial Parts of Young, Field-Grown Amaranthus Genotypes

DEFF Research Database (Denmark)

Steffensen, Stine Krogh; Pedersen, H. A.; Labouriau, R.

2011-01-01

-trans-feruloyltyramine, N-trans-feruloyl-4-O-methyldopamine), and betaines (glycinebetaine, trigonelline) were determined. The variation in phytochemical content due to species and cultivation site was analyzed utilizing the multivariate statistical methods of principal component analysis (PCA) and graphical model (GM...... primarily by a higher content of trigonelline and the two hydroxycinnamyl amides in A. mantegazzianus. The GM showed that the quantities of the different analytes within each compound group were intercorrelated except in the case of the betaines. The betaines carried no information on each other...

Earth rotation excitation mechanisms derived from geodetic space observations

Science.gov (United States)

Göttl, F.; Schmidt, M.

2009-04-01

Earth rotation variations are caused by mass displacements and motions in the subsystems of the Earth. Via the satellite Gravity and Climate Experiment (GRACE) gravity field variations can be identified which are caused by mass redistribution in the Earth system. Therefore time variable gravity field models (GFZ RL04, CSR RL04, JPL RL04, ITG-Grace03, GRGS, ...) can be used to derive different impacts on Earth rotation. Furthermore satellite altimetry provides accurate information on sea level anomalies (AVISO, DGFI) which are caused by mass and volume changes of seawater. Since Earth rotation is solely affected by mass variations and motions the volume (steric) effect has to be reduced from the altimetric observations in order to infer oceanic contributions to Earth rotation variations. Therefore the steric effect is estimated from physical ocean parameters such as temperature and salinity changes in the oceans (WOA05, Ishii). In this study specific individual geophysical contributions to Earth rotation variations are identified by means of a multitude of accurate geodetic space observations in combination with a realistic error propagation. It will be shown that due to adjustment of altimetric and/or gravimetric solutions the results for polar motion excitations can be improved.

Reaction pathways of model compounds of biomass-derived oxygenates on Fe/Ni bimetallic surfaces

Science.gov (United States)

Yu, Weiting; Chen, Jingguang G.

2015-10-01

Controlling the activity and selectivity of converting biomass-derivatives to fuels and valuable chemicals is critical for the utilization of biomass feedstocks. There are primarily three classes of non-food competing biomass, cellulose, hemicellulose and lignin. In the current work, glycolaldehyde, furfural and acetaldehyde are studied as model compounds of the three classes of biomass-derivatives. Monometallic Ni(111) and monolayer (ML) Fe/Ni(111) bimetallic surfaces are studied for the reaction pathways of the three biomass surrogates. The ML Fe/Ni(111) surface is identified as an efficient surface for the conversion of biomass-derivatives from the combined results of density functional theory (DFT) calculations and temperature programmed desorption (TPD) experiments. A correlation is also established between the optimized adsorption geometry and experimental reaction pathways. These results should provide helpful insights in catalyst design for the upgrading and conversion of biomass.

Spectral Variation of NLS1 Galaxy PMN J0948+0022

Indian Academy of Sciences (India)

2016-01-27

Jan 27, 2016 ... Four well-sampled Spectral Energy Distributions (SEDs) of PMN J0948+0022 are fitted with the syn+SSC+EC model to derive the physical parameters of its jets and to investigate the spectral variations of its SEDs. A tentative correlation between the peak luminosity (c) and peak frequency (c) of its ...

A new variational formulation of kinetic plasma theory and the application of moving finite elements

International Nuclear Information System (INIS)

Glasser, A.H.

1991-01-01

A new variational formulation has been developed for the system of equations governing kinetic plasmas and electromagnetic fields. It is used to apply the method of Moving Finite Elements to the electromagnetic fields. The fields are expanded in a basis of linear finite elements on a movable, unstructured grid of triangles in 2D or tetrahedra in 3D, while the plasma distribution function is expanded in a basis of super particles. Minimization of the variational with respect to the time derivatives of the field quantities yields a coupled system of equations for simultaneously advancing the amplitudes and node positions, resulting in adaptive grid motion. The adaptivity of the grid may save a large factor in the size of the grid and the number of particles required in many problems. Minimization of the variational with respect to the time derivatives of the particle positions and velocities gives the equations of motion, providing consistent prescriptions for assigning particles to the grid and fields to the particles. Orthogonality conditions on the particles are derived as conditions for keeping their equations of motion independent. Collisions can be included in a natural way. The relationship between PIC methods and alternative methods of discretizing phase space is clarified

Convergence rates in constrained Tikhonov regularization: equivalence of projected source conditions and variational inequalities

International Nuclear Information System (INIS)

Flemming, Jens; Hofmann, Bernd

2011-01-01

In this paper, we enlighten the role of variational inequalities for obtaining convergence rates in Tikhonov regularization of nonlinear ill-posed problems with convex penalty functionals under convexity constraints in Banach spaces. Variational inequalities are able to cover solution smoothness and the structure of nonlinearity in a uniform manner, not only for unconstrained but, as we indicate, also for constrained Tikhonov regularization. In this context, we extend the concept of projected source conditions already known in Hilbert spaces to Banach spaces, and we show in the main theorem that such projected source conditions are to some extent equivalent to certain variational inequalities. The derived variational inequalities immediately yield convergence rates measured by Bregman distances

Derivation of the Euler equations in Thomas-Fermi theories of a hot nuclear system

International Nuclear Information System (INIS)

Wang, C.

1992-01-01

The variational extreme condition with respect to statistical distribution of nucleons in momentum space is applied to derive the Euler equation of the nuclear density profile. The resultant Euler equation of the nuclear density profile is proven to be identical with that obtained in the usual Thomas-Fermi theories of a hot nuclear system where the variation is made with respect to the nuclear density profile. A Fermi-Dirac-type distribution appears as a result of variation in the present approach, while it is used as a given expression in obtaining the variation of the nuclear density profile in the usual Thomas-Fermi theories

Numerical estimation of aircrafts' unsteady lateral-directional stability derivatives

Directory of Open Access Journals (Sweden)

Maričić N.L.

2006-01-01

Full Text Available A technique for predicting steady and oscillatory aerodynamic loads on general configuration has been developed. The prediction is based on the Doublet-Lattice Method, Slender Body Theory and Method of Images. The chord and span wise loading on lifting surfaces and longitudinal bodies (in horizontal and vertical plane load distributions are determined. The configuration may be composed of an assemblage of lifting surfaces (with control surfaces and bodies (with circular cross sections and a longitudinal variation of radius. Loadings predicted by this method are used to calculate (estimate steady and unsteady (dynamic lateral-directional stability derivatives. The short outline of the used methods is given in [1], [2], [3], [4] and [5]. Applying the described methodology software DERIV is developed. The obtained results from DERIV are compared to NASTRAN examples HA21B and HA21D from [4]. In the first example (HA21B, the jet transport wing (BAH wing is steady rolling and lateral stability derivatives are determined. In the second example (HA21D, lateral-directional stability derivatives are calculated for forward- swept-wing (FSW airplane in antisymmetric quasi-steady maneuvers. Acceptable agreement is achieved comparing the results from [4] and DERIV.

On isochronous derivatives of the first and second order in space dynamics tasks

Science.gov (United States)

Bakshiyan, B. T.; Sukhanov, A. A.

1979-01-01

The first and second isochronous derivatives are calculated from the vector of state of dynamic system using its initial value. Use is made of the method of finding a fundamental solution of conjugate variational equations. This solution and the corresponding universal relationship for isochronous derivatives are found for the two-body problem in a form which is simple and suitable for computer programming. The form of these relationships was obtained for motion which differs from parabolic motion. Formulas are given for isochronous derivatives using the gravitational parameter in the two-body problem.

Seasonal variations and sources of sedimentary organic carbon in Tokyo Bay

International Nuclear Information System (INIS)

Kubo, Atsushi; Kanda, Jota

2017-01-01

Total organic carbon (TOC), total nitrogen (TN) contents, their stable C and N isotope ratio (δ 13 C and δ 15 N), and chlorophyll a ([Chl a] sed ) of surface sediments were investigated monthly to identify the seasonal variations and sources of organic matter in Tokyo Bay. The sedimentary TOC (TOC sed ) and TN (TN sed ) contents, and the sedimentary δ 13 C and δ 15 N (δ 13 C sed and δ 15 N sed ) values were higher in summer than other seasons. The seasonal variations were controlled by high primary production in the water column and hypoxic water in the bottom water during summer. The fraction of terrestrial and marine derived organic matter was estimated by Bayesian mixing model using stable isotope data and TOC/TN ratio. Surface sediments in Tokyo Bay are dominated by marine derived organic matter, which accounts for about 69 ± 5% of TOC sed . - Highlights: • High values of sedimentary organic carbon and nitrogen were observed in summer. • Surface sediments in Tokyo Bay were dominated by marine derived organic matter which was estimated by Bayesian mixing model. • The most amount of terrestrial POC was deposited and degraded in Tokyo Bay before being discharged to the open ocean.

Mini-review: Strategies for Variation and Evolution of Bacterial Antigens

Science.gov (United States)

Foley, Janet

2015-01-01

Across the eubacteria, antigenic variation has emerged as a strategy to evade host immunity. However, phenotypic variation in some of these antigens also allows the bacteria to exploit variable host niches as well. The specific mechanisms are not shared-derived characters although there is considerable convergent evolution and numerous commonalities reflecting considerations of natural selection and biochemical restraints. Unlike in viruses, mechanisms of antigenic variation in most bacteria involve larger DNA movement such as gene conversion or DNA rearrangement, although some antigens vary due to point mutations or modified transcriptional regulation. The convergent evolution that promotes antigenic variation integrates various evolutionary forces: these include mutations underlying variant production; drift which could remove alleles especially early in infection or during life history phases in arthropod vectors (when the bacterial population size goes through a bottleneck); selection not only for any particular variant but also for the mechanism for the production of variants (i.e., selection for mutability); and overcoming negative selection against variant production. This review highlights the complexities of drivers of antigenic variation, in particular extending evaluation beyond the commonly cited theory of immune evasion. A deeper understanding of the diversity of purpose and mechanisms of antigenic variation in bacteria will contribute to greater insight into bacterial pathogenesis, ecology and coevolution with hosts. PMID:26288700

Effect of culture methods on individual variation in the growth of sea cucumber Apostichopus japonicus within a cohort and family

Science.gov (United States)

Qiu, Tianlong; Zhang, Libin; Zhang, Tao; Bai, Yucen; Yang, Hongsheng

2014-07-01

There is substantial individual variation in the growth rates of sea cucumber Apostichopus japonicus individuals. This necessitates additional work to grade the seed stock and lengthens the production period. We evaluated the influence of three culture methods (free-mixed, isolated-mixed, isolated-alone) on individual variation in growth and assessed the relationship between feeding, energy conversion efficiency, and individual growth variation in individually cultured sea cucumbers. Of the different culture methods, animals grew best when reared in the isolated-mixed treatment (i.e., size classes were held separately), though there was no difference in individual variation in growth between rearing treatment groups. The individual variation in growth was primarily attributed to genetic factors. The difference in food conversion efficiency caused by genetic differences among individuals was thought to be the origin of the variance. The level of individual growth variation may be altered by interactions among individuals and environmental heterogeneity. Our results suggest that, in addition to traditional seed grading, design of a new kind of substrate that changes the spatial distribution of sea cucumbers would effectively enhance growth and reduce individual variation in growth of sea cucumbers in culture.

VarioML framework for comprehensive variation data representation and exchange

Directory of Open Access Journals (Sweden)

Byrne Myles

2012-10-01

Full Text Available Abstract Background Sharing of data about variation and the associated phenotypes is a critical need, yet variant information can be arbitrarily complex, making a single standard vocabulary elusive and re-formatting difficult. Complex standards have proven too time-consuming to implement. Results The GEN2PHEN project addressed these difficulties by developing a comprehensive data model for capturing biomedical observations, Observ-OM, and building the VarioML format around it. VarioML pairs a simplified open specification for describing variants, with a toolkit for adapting the specification into one's own research workflow. Straightforward variant data can be captured, federated, and exchanged with no overhead; more complex data can be described, without loss of compatibility. The open specification enables push-button submission to gene variant databases (LSDBs e.g., the Leiden Open Variation Database, using the Cafe Variome data publishing service, while VarioML bidirectionally transforms data between XML and web-application code formats, opening up new possibilities for open source web applications building on shared data. A Java implementation toolkit makes VarioML easily integrated into biomedical applications. VarioML is designed primarily for LSDB data submission and transfer scenarios, but can also be used as a standard variation data format for JSON and XML document databases and user interface components. Conclusions VarioML is a set of tools and practices improving the availability, quality, and comprehensibility of human variation information. It enables researchers, diagnostic laboratories, and clinics to share that information with ease, clarity, and without ambiguity.

Triacylglycerol Accumulation is not primarily affected in Myotubes established from Type 2 Diabetic Subjects

DEFF Research Database (Denmark)

Gaster, Michael; Beck-Nielsen, Henning

2006-01-01

In the present study, we investigated triacylglycerol (TAG) accumulation, glucose and fatty acid (FA) uptake, and glycogen synthesis (GS) in human myotubes from healthy, lean, and obese subjects with and without type 2 diabetes (T2D), exposed to increasing palmitate (PA) and oleate (OA...... uptake (P0.05). These results indicate that (1) TAG accumulation is not primarily affected in skeletal muscle tissue of obese and T2D; (2) induced inhibition of oxidative phosphorylation is followed by TAG accumulation...... in skeletal muscle of obese and T2D subjects is adaptive....

Data-driven Inference and Investigation of Thermosphere Dynamics and Variations

Science.gov (United States)

Mehta, P. M.; Linares, R.

2017-12-01

This paper presents a methodology for data-driven inference and investigation of thermosphere dynamics and variations. The approach uses data-driven modal analysis to extract the most energetic modes of variations for neutral thermospheric species using proper orthogonal decomposition, where the time-independent modes or basis represent the dynamics and the time-depedent coefficients or amplitudes represent the model parameters. The data-driven modal analysis approach combined with sparse, discrete observations is used to infer amplitues for the dynamic modes and to calibrate the energy content of the system. In this work, two different data-types, namely the number density measurements from TIMED/GUVI and the mass density measurements from CHAMP/GRACE are simultaneously ingested for an accurate and self-consistent specification of the thermosphere. The assimilation process is achieved with a non-linear least squares solver and allows estimation/tuning of the model parameters or amplitudes rather than the driver. In this work, we use the Naval Research Lab's MSIS model to derive the most energetic modes for six different species, He, O, N2, O2, H, and N. We examine the dominant drivers of variations for helium in MSIS and observe that seasonal latitudinal variation accounts for about 80% of the dynamic energy with a strong preference of helium for the winter hemisphere. We also observe enhanced helium presence near the poles at GRACE altitudes during periods of low solar activity (Feb 2007) as previously deduced. We will also examine the storm-time response of helium derived from observations. The results are expected to be useful in tuning/calibration of the physics-based models.

Spatial variations in composition of the Valles Marineris and Isidis Planitia regions of Mars derived from ISM data

Science.gov (United States)

Erard, S.; Bibring, J.-P.; Forni, O.; Mustard, J.; Head, J. W.

1991-01-01

The present study summarizes preliminary results of an analysis of spaceborne near-infrared imaging spectroscopic data obtained from the martian surface. The sources of spectral variation are identified and surface units are mapped on the basis of the observed spectral properties. The findings indicate that strong spectral variations exist down to the limit of spatial resolution (22 x 22 sq km) of the ISM instrument. The most discriminant criteria are brightness, strength of the 3-micron absorption due to hydration, and near-infrared spectral slope. Bright areas are relatively featureless, but spectral subunits can be delimited within them. Dark areas are heterogeneous, with variations related to mafic mineralogy and partial coatings by fine material. Topographic and spectroscopic maps compiled from the ISM data agree in general with previous results, but provide additional detail and compositional information.

Joint statistics of partial sums of ordered exponential variates and performance of GSC RAKE receivers over rayleigh fading channel

KAUST Repository

Nam, Sungsik; Hasna, Mazen Omar; Alouini, Mohamed-Slim

2011-01-01

-interference on GSC RAKE receivers. The major difficulty in these problems is to derive some joint statistics of ordered exponential variates. With this motivation in mind, we capitalize in this paper on some new order statistics results to derive exact closed

A variational approach to operator and matrix Pade approximation. Applications to potential scattering and field theory

International Nuclear Information System (INIS)

Mery, P.

1977-01-01

The operator and matrix Pade approximation are defined. The fact that these approximants can be derived from the Schwinger variational principle is emphasized. In potential theory, using this variational aspect it is shown that the matrix Pade approximation allow to reproduce the exact solution of the Lippman-Schwinger equation with any required accuracy taking only into account the knowledge of the first two coefficients in the Born expansion. The deep analytic structure of this variational matrix Pade approximation (hyper Pade approximation) is discussed

Functional analysis and applied optimization in Banach spaces applications to non-convex variational models

CERN Document Server

Botelho, Fabio

2014-01-01

This book introduces the basic concepts of real and functional analysis. It presents the fundamentals of the calculus of variations, convex analysis, duality, and optimization that are necessary to develop applications to physics and engineering problems. The book includes introductory and advanced concepts in measure and integration, as well as an introduction to Sobolev spaces. The problems presented are nonlinear, with non-convex variational formulation. Notably, the primal global minima may not be attained in some situations, in which cases the solution of the dual problem corresponds to an appropriate weak cluster point of minimizing sequences for the primal one. Indeed, the dual approach more readily facilitates numerical computations for some of the selected models. While intended primarily for applied mathematicians, the text will also be of interest to engineers, physicists, and other researchers in related fields.

Computation of the stability derivatives via CFD and the sensitivity equations

Science.gov (United States)

Lei, Guo-Dong; Ren, Yu-Xin

2011-04-01

The method to calculate the aerodynamic stability derivates of aircrafts by using the sensitivity equations is extended to flows with shock waves in this paper. Using the newly developed second-order cell-centered finite volume scheme on the unstructured-grid, the unsteady Euler equations and sensitivity equations are solved simultaneously in a non-inertial frame of reference, so that the aerodynamic stability derivatives can be calculated for aircrafts with complex geometries. Based on the numerical results, behavior of the aerodynamic sensitivity parameters near the shock wave is discussed. Furthermore, the stability derivatives are analyzed for supersonic and hypersonic flows. The numerical results of the stability derivatives are found in good agreement with theoretical results for supersonic flows, and variations of the aerodynamic force and moment predicted by the stability derivatives are very close to those obtained by CFD simulation for both supersonic and hypersonic flows.

A generalized variational algebra and conserved densities for linear evolution equations

International Nuclear Information System (INIS)

Abellanas, L.; Galindo, A.

1978-01-01

The symbolic algebra of Gel'fand and Dikii is generalized to the case of n variables. Using this algebraic approach a rigorous characterization of the polynomial kernel of the variational derivative is given. This is applied to classify all the conservation laws for linear polynomial evolution equations of arbitrary order. (Auth.)

Inter-fraction variations in respiratory motion models

Energy Technology Data Exchange (ETDEWEB)

McClelland, J R; Modat, M; Ourselin, S; Hawkes, D J [Centre for Medical Image Computing, University College London (United Kingdom); Hughes, S; Qureshi, A; Ahmad, S; Landau, D B, E-mail: j.mcclelland@cs.ucl.ac.uk [Department of Oncology, Guy' s and St Thomas' s Hospitals NHS Trust, London (United Kingdom)

2011-01-07

Respiratory motion can vary dramatically between the planning stage and the different fractions of radiotherapy treatment. Motion predictions used when constructing the radiotherapy plan may be unsuitable for later fractions of treatment. This paper presents a methodology for constructing patient-specific respiratory motion models and uses these models to evaluate and analyse the inter-fraction variations in the respiratory motion. The internal respiratory motion is determined from the deformable registration of Cine CT data and related to a respiratory surrogate signal derived from 3D skin surface data. Three different models for relating the internal motion to the surrogate signal have been investigated in this work. Data were acquired from six lung cancer patients. Two full datasets were acquired for each patient, one before the course of radiotherapy treatment and one at the end (approximately 6 weeks later). Separate models were built for each dataset. All models could accurately predict the respiratory motion in the same dataset, but had large errors when predicting the motion in the other dataset. Analysis of the inter-fraction variations revealed that most variations were spatially varying base-line shifts, but changes to the anatomy and the motion trajectories were also observed.

Variational principle for a prototype Rastall theory of gravitation

International Nuclear Information System (INIS)

Smalley, L.L.

1984-01-01

A prototype of Rastall's theory of gravity, in which the divergence of the energy-momentum tensor is proportional to the gradient of the scalar curvature, is shown to be derivable from a variational principle. Both the proportionality factor and the unrenormalized gravitational constant are found to be covariantly constant, but not necessarily constant. The prototype theory is, therefore, a gravitational theory with variable gravitational constant

Seasonal and Daily Variations of Subsurface Velocity Revealed by the Air-gun Source in Binchuan, Yunnan, China

Science.gov (United States)

Luan, Y.; Yang, H.; Wang, B.

2017-12-01

We derive temporal variations of subsurface structure using a large-volume air-gun source excited in Binchuan, Yunnan, southwest China, the first transmitting seismic station that can generate high-quality repeating waveforms. The data were collected between January 2013 and December 2015 that were recorded by 40 stations within 150 km, including permanent and newly deployed air-gun array stations. Firstly, we conduct cluster analysis using the waveforms at the nearest station and find the clustering result is not only governed by the water level of the reservoir, but also has seasonal variations. Furthermore, we use the records of the nearest station to approximate the source time functions and then retrieve empirical Green's functions (EGF) by deconvolution. Then we obtain travel time difference by comparing the EGF. The travel time difference exhibits clear seasonal variation, and the pattern correlates the best with surface air temperature. The increasing temperature coincides with increasing delay time i.e. decreasing seismic velocity. We interpret the observed seasonal variation of subsurface velocity is partly caused by thermo-elastic strain. However, our calculated thermo-elastic strain is only half in amplitude of the observed strain, indicating other factors such as precipitation and ground water level may play a role in the subsurface changes. Moreover, we derive the daily variation of subsurface velocity in December 2015 when air-gun shots were made in every hour. The delay time clearly correlates with the barometric pressure change and the tidal strain. Here we demonstrate that both long-term (seasonal) and short-term (daily) structural variations can be derived using the newly constructed active source, which is a powerful tool to advance our understanding of rheological properties of the crust as well as well processes associated with earthquakes and other natural hazards.

P-Splines Using Derivative Information

KAUST Repository

Calderon, Christopher P.

2010-01-01

Time series associated with single-molecule experiments and/or simulations contain a wealth of multiscale information about complex biomolecular systems. We demonstrate how a collection of Penalized-splines (P-splines) can be useful in quantitatively summarizing such data. In this work, functions estimated using P-splines are associated with stochastic differential equations (SDEs). It is shown how quantities estimated in a single SDE summarize fast-scale phenomena, whereas variation between curves associated with different SDEs partially reflects noise induced by motion evolving on a slower time scale. P-splines assist in "semiparametrically" estimating nonlinear SDEs in situations where a time-dependent external force is applied to a single-molecule system. The P-splines introduced simultaneously use function and derivative scatterplot information to refine curve estimates. We refer to the approach as the PuDI (P-splines using Derivative Information) method. It is shown how generalized least squares ideas fit seamlessly into the PuDI method. Applications demonstrating how utilizing uncertainty information/approximations along with generalized least squares techniques improve PuDI fits are presented. Although the primary application here is in estimating nonlinear SDEs, the PuDI method is applicable to situations where both unbiased function and derivative estimates are available.

Quantitative gene expression profiling of CD45(+) and CD45(-) skeletal muscle-derived side population cells

DEFF Research Database (Denmark)

Andersen, Ditte Caroline; Kristiansen, Gitte Qvistgaard; Jensen, Line

2011-01-01

transcripts associated with endothelial cells, Notch signaling and myogenic precursors. By comparing the mRNA signatures of mSPs with those of adipose tissue-derived SP populations, a common endothelial component seemed to reside in both muscle and fat-derived SPCD45(-) entities. However, each SP subset......The skeletal muscle-derived side population (mSP) which highly excludes Hoechst 33342 is composed of CD45(+) and CD45(-) subpopulations; yet, rareness of mSP cells in general has complicated extensive quantitative analysis of gene expression profiles in primarily isolated mSP cells. Here, we...... describe the isolation of adult mouse normal skeletal muscle residing SPCD45(+) and SPCD45(-) cells from a parent mononuclear muscle-derived cell (MDC) population. Relative quantitative real time PCR (RT-PCR) of 64 genes revealed that mSPCD45(-) compared with mSPCD45(+) was enriched for cells expressing...

Factors influencing individual variation in perceptual directional microphone benefit.

Science.gov (United States)

Keidser, Gitte; Dillon, Harvey; Convery, Elizabeth; Mejia, Jorge

2013-01-01

in perceptual directional microphone benefit (95% confidence interval [CI]: 34-78%), while another 37% of variation was explained primarily by the physical performance of the directional microphones after they were fitted to individuals. The most contributing factor was the in situ 3D AI-DI measured across the low frequencies. Repeated SRTn measurements are needed to obtain a reliable indication of the perceptual directional benefit in an individual. Further, to obtain optimum benefit from directional microphones, the effectiveness of the microphones should be maximized across the low frequencies. American Academy of Audiology.

Examining Change in K-3 Teachers' Mathematical Knowledge, Attitudes, and Beliefs: The Case of Primarily Math

Science.gov (United States)

Kutaka, T. S.; Ren, L.; Smith, W. M.; Beattie, H. L.; Edwards, C. P.; Green, J. L.; Chernyavskiy, P.; Stroup, W.; Heaton, R. M.; Lewis, W. J.

2018-01-01

This study examines the impact of the Primarily Math Elementary Mathematics Specialist program on K-3 teachers' mathematical content knowledge for teaching, attitudes toward learning mathematics, and beliefs about mathematics teaching and learning. Three cohorts of teachers participating in the program were compared to a similar group of…

Do measures matter? Comparing surface-density-derived and census-tract-derived measures of racial residential segregation

Directory of Open Access Journals (Sweden)

Waller Lance A

2010-06-01

preterm birth in metropolitan areas changed from 2.12 to 1.68 for the effect of high versus low segregation when using surface-density-derived versus tract-derived segregation indices. Variation in effect size was smaller but still present in analyses of neighborhood racial composition and very preterm birth in Atlanta neighborhoods. Conclusion Census tract-derived measures of segregation are highly correlated with recently introduced spatial segregation measures, but the residual differences among measures are not uniform for all areas. Use of surface-density-derived measures provides researchers with tools to further explore the spatial relationships between segregation and health disparities.

About efficient quasi-Newtonian schemes for variational calculations in nuclear structure

International Nuclear Information System (INIS)

Puddu, G.

2009-01-01

The Broyden-Fletcher-Goldhaber-Shanno (BFGS) quasi-Newtonian scheme is known as the most efficient scheme for variational calculations of energies. This scheme is actually a member of a one-parameter family of variational methods, known as the Broyden β-family. In some applications to light nuclei using microscopically derived effective Hamiltonians starting from accurate nucleon-nucleon potentials, we actually found other members of the same family which have better performance than the BFGS method. We also extend the Broyden β -family of algorithms to a two-parameter family of rank-three updates which has even better performances. (orig.)

Effect of conductivity variations within the electric double layer on the streaming potential estimation in narrow fluidic confinements.

Science.gov (United States)

Das, Siddhartha; Chakraborty, Suman

2010-07-06

In this article, we investigate the implications of ionic conductivity variations within the electrical double layer (EDL) on the streaming potential estimation in pressure-driven fluidic transport through narrow confinements. Unlike the traditional considerations, we do not affix the ionic conductivities apriori by employing preset values of dimensionless parameters (such as the Dukhin number) to estimate the streaming potential. Rather, utilizing the Gouy-Chapman-Grahame model for estimating the electric potential and charge density distribution within the Stern layer, we first quantify the Stern layer electrical conductivity as a function of the zeta potential and other pertinent parameters quantifying the interaction of the ionic species with the charged surface. Next, by invoking the Boltzmann model for cationic and anionic distribution within the diffuse layer, we obtain the diffuse layer electrical conductivity. On the basis of these two different conductivities pertaining to the two different portions of the EDL as well as the bulk conductivity, we define two separate Dukhin numbers that turn out to be functions of the dimensionless zeta potential and the channel height to Debye length ratio. We derive analytical expressions for the streaming potential as a function of the fundamental governing parameters, considering the above. The results reveal interesting and significant deviations between the streaming potential predictions from the present considerations against the corresponding predictions from the classical considerations in which electrochemically consistent estimates of variable EDL conductivity are not traditionally accounted for. In particular, it is revealed that the variations of streaming potential with zeta potential are primarily determined by the competing effects of EDL electromigration and ionic advection. Over low and high zeta potential regimes, the Stern layer and diffuse layer conductivities predominantly dictate the streaming

City-level variations in NOx emissions derived from hourly monitoring data in Chicago

Science.gov (United States)

de Foy, Benjamin

2018-03-01

Control on emissions of nitrogen oxides (NOx) in the United States of America have led to reductions in concentrations in urban areas by up to a factor of two in the last decade. The Air Quality System monitoring network provides surface measurements of concentrations at hourly resolution over multiple years, revealing variations at the annual, seasonal, day of week and diurnal time scales. A multiple linear regression model was used to estimate the temporal profiles in the NOx concentrations as well as the impact of meteorology, ozone concentrations, and boundary layer heights. The model is applied to data from 2005 to 2016 available at 6 sites in Chicago, Illinois. Results confirm the 50% decrease in NOx over the length of the time series. The weekend effect is found to be stronger in more commercial areas, with 32% reductions on Saturdays and 45% on Sundays and holidays; and weaker in more residential areas with 20% reductions on Saturdays and 30% reductions on Sundays. Weekday diurnal profiles follow a double hump with emission peaks during the morning and afternoon rush hours, but only a shallow drop during the middle day. Difference in profiles from the 6 sites suggest that there are different emission profiles within the urban area. Diurnal profiles on Saturdays have less variation throughout the day and more emissions in the evening. Sundays are very different from both weekdays and Saturdays with a gradual increase until the early evening. The results suggest that in addition to vehicle type and vehicle miles traveled, vehicle speed and congestion must be taken into account to correctly quantify morning rush hour emissions and the weekend effect.

Stochastic approach to the derivation of emission limits for wastewater treatment plants.

Science.gov (United States)

Stransky, D; Kabelkova, I; Bares, V

2009-01-01

Stochastic approach to the derivation of WWTP emission limits meeting probabilistically defined environmental quality standards (EQS) is presented. The stochastic model is based on the mixing equation with input data defined by probability density distributions and solved by Monte Carlo simulations. The approach was tested on a study catchment for total phosphorus (P(tot)). The model assumes input variables independency which was proved for the dry-weather situation. Discharges and P(tot) concentrations both in the study creek and WWTP effluent follow log-normal probability distribution. Variation coefficients of P(tot) concentrations differ considerably along the stream (c(v)=0.415-0.884). The selected value of the variation coefficient (c(v)=0.420) affects the derived mean value (C(mean)=0.13 mg/l) of the P(tot) EQS (C(90)=0.2 mg/l). Even after supposed improvement of water quality upstream of the WWTP to the level of the P(tot) EQS, the WWTP emission limits calculated would be lower than the values of the best available technology (BAT). Thus, minimum dilution ratios for the meaningful application of the combined approach to the derivation of P(tot) emission limits for Czech streams are discussed.

Derivation of ozone flux-yield relationships for lettuce: A key horticultural crop

International Nuclear Information System (INIS)

Goumenaki, Eleni; Fernandez, Ignacio Gonzalez; Papanikolaou, Antigoni; Papadopoulou, Despoina; Askianakis, Christos; Kouvarakis, George; Barnes, Jeremy

2007-01-01

Ozone flux-response relationships were derived for lettuce, employing a multiplicative approach to model the manner in which stomatal conductance is influenced by key environmental variables, using a dataset collected during field experimentation in Crete and yield-response relationships derived from parallel open-top chamber experiments. Regional agronomic practices were adopted throughout. Computed versus measured data revealed that the derived model explained 51% (P -2 s -1 . Regressions employing very low or zero flux thresholds resulted in the strongest yield-flux relationships (explaining ∼80% (P < 0.05) of the variation in the dataset). - Establishment of ozone flux-yield relationships for a commercially-important horticultural crop grown widely in the Mediterranean

Interspecies Variation in the Susceptibility of a Wild-Derived Colony of Mice to Pinworms (Aspiculuris tetraptera).

Science.gov (United States)

Curtis, Ryan C; Murray, Jill K; Campbell, Polly; Nagamori, Yoko; Molnar, Adam; Jackson, Todd A

2017-01-01

Pinworms are common parasites in wild and laboratory rodents. Despite their relative nonpathogenicity in immunocompetent models, pinworm infections add an unwanted variable and may confound some types of research. For this reason, health monitoring programs and biosecurity measures aim to minimize the spread of pinworm infections into colonies free from the organisms. Wild-derived and laboratory strains of mice have shown varied susceptibility to infection with Aspiculuris tetraptera, the most commonly found murine pinworm. In particular, susceptibility is increased in wild-derived mice, young animals, and males. Routine surveillance at our institution revealed pinworm infection (A. tetraptera only) within a colony of multiple, wild-derived species of Mus, although only specific species showed positive results during initial sampling. To assess whether species-associated differences in susceptibility were present, we analyzed fecal egg counts of A. tetraptera in every cage of the colony. Our results revealed significant differences in susceptibility between various species and subspecies of Mus. Egg counts were significantly higher in Mus spicilegus than Mus m. domesticus (WSB/EiJ) and Mus macedonicus. Mus spretus had higher egg counts than M. m. domesticus (WSB/EiJ), M. m. musculus (PWK/PhJ), and M. macedonicus. Egg counts did not differ in regard to age, sex, or number of mice per cage. As wild-derived mouse models continue to compliment research largely based on laboratory strains, it will be important to understand host-parasite interactions and their effects on research, particularly studies evaluating immune responses, behavior, growth, and other physiologic parameters.

Variational extension of the time-dependent mean field approach

International Nuclear Information System (INIS)

Flocard, H.

1989-01-01

We investigate an application of the variational principle of Balian and Veneroni for density operators and observables. Our choice for the trial spaces incorporates correlations in the density operator. It allows one to calculate the expectation values of both one-body and two-body observables. We derive a set of coupled equations which extends the TDHF formalism, and determines the evolution of the partition function, the one-body density and the second cumulant (it corresponds also to a truncation of the quantal counterpart of the BBKGY equations). By restricting further the trial space for the two-body observables, the variational principle generates simpler equations which still include the effects of a selected class of correlations on the evolution of the one-body density

Where Does Latin "Sum" Come From?

Science.gov (United States)

Nyman, Martti A.

1977-01-01

The derivation of Latin "sum,""es(s),""est" from Indo-European "esmi,""est,""esti" involves methodological problems. It is claimed here that the development of "sum" from "esmi" is related to the origin of the variation "est-st" (less than"esti"). The study is primarily concerned with this process, but chronological suggestions are also made. (CHK)

Assessment of the accuracy of ABC/2 variations in traumatic epidural hematoma volume estimation: a retrospective study

Directory of Open Access Journals (Sweden)

Pengfei Yan

2016-04-01

Full Text Available Background. The traumatic epidural hematoma (tEDH volume is often used to assist in tEDH treatment planning and outcome prediction. ABC/2 is a well-accepted volume estimation method that can be used for tEDH volume estimation. Previous studies have proposed different variations of ABC/2; however, it is unclear which variation will provide a higher accuracy. Given the promising clinical contribution of accurate tEDH volume estimations, we sought to assess the accuracy of several ABC/2 variations in tEDH volume estimation. Methods. The study group comprised 53 patients with tEDH who had undergone non-contrast head computed tomography scans. For each patient, the tEDH volume was automatically estimated by eight ABC/2 variations (four traditional and four newly derived with an in-house program, and results were compared to those from manual planimetry. Linear regression, the closest value, percentage deviation, and Bland-Altman plot were adopted to comprehensively assess accuracy. Results. Among all ABC/2 variations assessed, the traditional variations y = 0.5 × A1B1C1 (or A2B2C1 and the newly derived variations y = 0.65 × A1B1C1 (or A2B2C1 achieved higher accuracy than the other variations. No significant differences were observed between the estimated volume values generated by these variations and those of planimetry (p > 0.05. Comparatively, the former performed better than the latter in general, with smaller mean percentage deviations (7.28 ± 5.90% and 6.42 ± 5.74% versus 19.12 ± 6.33% and 21.28 ± 6.80%, respectively and more values closest to planimetry (18/53 and 18/53 versus 2/53 and 0/53, respectively. Besides, deviations of most cases in the former fell within the range of 20% (90.57% and 96.23, respectively. Discussion. In the current study, we adopted an automatic approach to assess the accuracy of several ABC/2 variations for tEDH volume estimation. Our initial results showed that the variations y = 0.5 × A1B1C1 (or A2B2C1

Anomalously high variation in postnatal development is ancestral for dinosaurs but lost in birds

Science.gov (United States)

Griffin, Christopher T.; Nesbitt, Sterling J.

2016-12-01

Compared with all other living reptiles, birds grow extremely fast and possess unusually low levels of intraspecific variation during postnatal development. It is now clear that birds inherited their high rates of growth from their dinosaurian ancestors, but the origin of the avian condition of low variation during development is poorly constrained. The most well-understood growth trajectories of later Mesozoic theropods (e.g., Tyrannosaurus, Allosaurus) show similarly low variation to birds, contrasting with higher variation in extant crocodylians. Here, we show that deep within Dinosauria, among the earliest-diverging dinosaurs, anomalously high intraspecific variation is widespread but then is lost in more derived theropods. This style of development is ancestral for dinosaurs and their closest relatives, and, surprisingly, this level of variation is far higher than in living crocodylians. Among early dinosaurs, this variation is widespread across Pangaea in the Triassic and Early Jurassic, and among early-diverging theropods (ceratosaurs), this variation is maintained for 165 million years to the end of the Cretaceous. Because the Late Triassic environment across Pangaea was volatile and heterogeneous, this variation may have contributed to the rise of dinosaurian dominance through the end of the Triassic Period.

Limits on cosmological variation of strong interaction and quark masses from big bang nucleosynthesis, cosmic, laboratory and Oklo data

International Nuclear Information System (INIS)

Flambaum, V.V.; Shuryak, E.V.

2002-01-01

Recent data on the cosmological variation of the electromagnetic fine structure constant from distant quasar (QSO) absorption spectra have inspired a more general discussion of the possible variation of other constants. We discuss the variation of strong scale and quark masses. We derive limits on their relative change from (i) primordial big bang nucleosynthesis, (ii) the Oklo natural nuclear reactor, (iii) quasar absorption spectra, and (iv) laboratory measurements of hyperfine intervals

Assessing vegetation response to climatic variations and human activities: spatiotemporal NDVI variations in the Hexi Corridor and surrounding areas from 2000 to 2010

Science.gov (United States)

Guan, Qingyu; Yang, Liqin; Guan, Wenqian; Wang, Feifei; Liu, Zeyu; Xu, Chuanqi

2018-03-01

Vegetation cover is a commonly used indicator for evaluating terrestrial environmental conditions, and for revealing environmental evolution and transitions. Spatiotemporal variations in the vegetation cover of the Hexi Corridor and surrounding areas from 2000 to 2010 were investigated using MODIS NDVI data, and the causes of vegetation cover changes were analyzed, considering both climatic variability and human activities. The vegetation cover of the study area increased during 2000-2010. The greenness of the vegetation showed a significant increase from the northwest to the southeast, which was similar to the spatial distribution of the annual precipitation. Variations in vegetation have a close relationship with those in precipitation within the Qilian Mountains region, but the NDVI is negatively correlated with precipitation in oasis areas. Increasing temperatures led to drought, inhibiting vegetation growth in summer; however, increasing temperatures may have also advanced and prolonged the growing periods in spring and autumn. The NDVI showed a slight degradation in March and July, primarily in the Qilian Mountains, and especially the Wushao Mountains. In March, due to low temperatures, the metabolism rate of vegetation was too slow to enable strong plant growth in high elevations of the Qilian Mountains. In July, increasing temperatures enhanced the intensity of transpiration and decreasing precipitation reduced the moisture available to plants, producing a slight degradation of vegetation in the Qilian Mountains. In May and August, the NDVI showed a significant improvement, primarily in the artificial oases and the Qilian Mountains. Abundant precipitation provided the necessary water for plant growth, and suitable temperatures increased the efficiency of photosynthesis, resulting in a significant improvement of vegetation in the Qilian Mountains. The improvement of production technologies, especially in irrigation, has been beneficial to the growth of

Understanding variation in human fertility: what can we learn from evolutionary demography?

Science.gov (United States)

Sear, Rebecca; Lawson, David W; Kaplan, Hillard; Shenk, Mary K

2016-04-19

Decades of research on human fertility has presented a clear picture of how fertility varies, including its dramatic decline over the last two centuries in most parts of the world. Why fertility varies, both between and within populations, is not nearly so well understood. Fertility is a complex phenomenon, partly physiologically and partly behaviourally determined, thus an interdisciplinary approach is required to understand it. Evolutionary demographers have focused on human fertility since the 1980s. The first wave of evolutionary demographic research made major theoretical and empirical advances, investigating variation in fertility primarily in terms of fitness maximization. Research focused particularly on variation within high-fertility populations and small-scale subsistence societies and also yielded a number of hypotheses for why fitness maximization seems to break down as fertility declines during the demographic transition. A second wave of evolutionary demography research on fertility is now underway, paying much more attention to the cultural and psychological mechanisms underpinning fertility. It is also engaging with the complex, multi-causal nature of fertility variation, and with understanding fertility in complex modern and transitioning societies. Here, we summarize the history of evolutionary demographic work on human fertility, describe the current state of the field, and suggest future directions. © 2016 The Author(s).

Direct healthcare costs of selected diseases primarily or partially transmitted by water.

Science.gov (United States)

Collier, S A; Stockman, L J; Hicks, L A; Garrison, L E; Zhou, F J; Beach, M J

2012-11-01

Despite US sanitation advancements, millions of waterborne disease cases occur annually, although the precise burden of disease is not well quantified. Estimating the direct healthcare cost of specific infections would be useful in prioritizing waterborne disease prevention activities. Hospitalization and outpatient visit costs per case and total US hospitalization costs for ten waterborne diseases were calculated using large healthcare claims and hospital discharge databases. The five primarily waterborne diseases in this analysis (giardiasis, cryptosporidiosis, Legionnaires' disease, otitis externa, and non-tuberculous mycobacterial infection) were responsible for over 40 000 hospitalizations at a cost of $970 million per year, including at least $430 million in hospitalization costs for Medicaid and Medicare patients. An additional 50 000 hospitalizations for campylobacteriosis, salmonellosis, shigellosis, haemolytic uraemic syndrome, and toxoplasmosis cost $860 million annually ($390 million in payments for Medicaid and Medicare patients), a portion of which can be assumed to be due to waterborne transmission.

MHD model including small-scale perturbations in a plasma with temperature variations

International Nuclear Information System (INIS)

Kuvshinov, B.N.; Mikhailovskii, A.B.

1996-01-01

The possibility is studied of using a hydrodynamic model to describe a magnetized plasma with density and temperature variations on scales that are arbitrary with respect to the ion Larmor radius. It is shown that the inertial component of the transverse ion thermal flux should be taken into account. This component is found from the collisionless kinetic equation. It can also be obtained from the equations of the Grad type. A set of two-dimensional hydrodynamic equations for ions is obtained with this component taken into account. These equations are used to derive model hydrodynamic expressions for the density and temperature variations. It is shown that, for large-scale perturbations (when the wavelengths are longer than the ion Larmor radius), the expressions derived coincide with the corresponding kinetic expressions and, for perturbations on sub-Larmor scales (when the wavelengths are shorter than the Larmor radius), they agree qualitatively. Hydrodynamic dispersion relations are derived for several types of drift waves with arbitrary wavenumbers. The range of applicability of the MHD model is determined from a comparison of these dispersion relations with the kinetic ones. It is noted that, on the basis of results obtained, drift effects can be included in numerical MHD codes for studying plasma instabilities in high-temperature regimes in tokamaks

Alternative derivations of the statistical mechanical distribution laws.

Science.gov (United States)

Wall, F T

1971-08-01

A new approach is presented for the derivation of statistical mechanical distribution laws. The derivations are accomplished by minimizing the Helmholtz free energy under constant temperature and volume, instead of maximizing the entropy under constant energy and volume. An alternative method involves stipulating equality of chemical potential, or equality of activity, for particles in different energy levels. This approach leads to a general statement of distribution laws applicable to all systems for which thermodynamic probabilities can be written. The methods also avoid use of the calculus of variations, Lagrangian multipliers, and Stirling's approximation for the factorial. The results are applied specifically to Boltzmann, Fermi-Dirac, and Bose-Einstein statistics. The special significance of chemical potential and activity is discussed for microscopic systems.

RAPID COMMUNICATION: Improving prediction accuracy of GPS satellite clocks with periodic variation behaviour

Science.gov (United States)

Heo, Youn Jeong; Cho, Jeongho; Heo, Moon Beom

2010-07-01

The broadcast ephemeris and IGS ultra-rapid predicted (IGU-P) products are primarily available for use in real-time GPS applications. The IGU orbit precision has been remarkably improved since late 2007, but its clock products have not shown acceptably high-quality prediction performance. One reason for this fact is that satellite atomic clocks in space can be easily influenced by various factors such as temperature and environment and this leads to complicated aspects like periodic variations, which are not sufficiently described by conventional models. A more reliable prediction model is thus proposed in this paper in order to be utilized particularly in describing the periodic variation behaviour satisfactorily. The proposed prediction model for satellite clocks adds cyclic terms to overcome the periodic effects and adopts delay coordinate embedding, which offers the possibility of accessing linear or nonlinear coupling characteristics like satellite behaviour. The simulation results have shown that the proposed prediction model outperforms the IGU-P solutions at least on a daily basis.

Density variations in the lower thermosphere. Scientific report No. 2

International Nuclear Information System (INIS)

Johnson, W.F.

1974-01-01

Accelerometer derived thermospheric density data from the LOGACS and SPADES satellites are processed to yield the equivalent density variation at 150 and 160 km respectively. Definite latitudinal and longitudinal variations are found which conflict with Jacchia's 1971 model. Time-latitude analyses are presented of density at a single altitude. The density response to a great geomagnetic storm is nearly the same from 25 0 S to 85 0 N except that a density trough forms just equatorward of the auroral oval. Gravity waves are observed during the storm. The structure and dynamics of the lower thermosphere are far more complex than previous studies indicate. (20 figures, 11 tables, 74 references) (U.S.)

Decadal variation in turbidity in the western Wadden Sea as derived from corrected Secchi disk readings.

NARCIS (Netherlands)

Philippart, C.J.M; Salama, M.S.; Kromkamp, J.C.; van der Woerd, H.J.; Zuur, A.F.; Cadée, G.C.

2013-01-01

The Wadden Sea has undergone many changes of which some (e.g., seagrass disappearance, dredging activities) are thought to have affected the concentrations of suspended particulate matter (SPM) in these waters. Results of previous analyses of long-term variation and trends in SPM are, however,

Metric-affine formalism of higher derivative scalar fields in cosmology

International Nuclear Information System (INIS)

Li, Mingzhe; Wang, Xiulian

2012-01-01

Higher derivative scalar field theories have received considerable attention for the potentially explanations of the initial state of the universe or the current cosmic acceleration which they might offer. They have also attracted many interests in the phenomenological studies of infrared modifications of gravity. These theories are mostly studied by the metric variational approach in which only the metric is the fundamental field to account for the gravitation. In this paper we study the higher derivative scalar fields with the metric-affine formalism where the affine connection is treated arbitrarily at the beginning. Because the higher derivative scalar fields couple to the connection directly in a covariant theory these two formalisms will lead to different results. These differences are suppressed by the powers of the Planck mass and are usually expected to have small effects. But in some cases they may cause non-negligible deviations. We show by a higher derivative dark energy model that the two formalisms lead to significantly different pictures of the future universe

Solar UV Variations During the Decline of Cycle 23

Science.gov (United States)

DeLand, Matthew, T.; Cebula, Richard P.

2011-01-01

Characterization of temporal and spectral variations in solar ultraviolet irradiance over a solar cycle is essential for understanding the forcing of Earth's atmosphere and climate. Satellite measurements of solar UV variability for solar cycles 21, 22, and 23 show consistent solar cycle irradiance changes at key wavelengths (e.g. 205 nm, 250 nm) within instrumental uncertainties. All historical data sets also show the same relative spectral dependence for both short-term (rotational) and long-term (solar cycle) variations. Empirical solar irradiance models also produce long-term solar UV variations that agree well with observational data. Recent UV irradiance data from the Solar Radiation and Climate Experiment (SORCE) Spectral Irradiance Monitor (SIM) and Solar Stellar Irradiance Comparison Experiment (SOLSTICE) instruments covering the declining phase of Cycle 23 present a different picture oflong-term solar variations from previous results. Time series of SIM and SOLSTICE spectral irradiance data between 2003 and 2007 show solar variations that greatly exceed both previous measurements and predicted irradiance changes over this period, and the spectral dependence of the SIM and SOLSTICE variations during these years do not show features expected from solar physics theory. The use of SORCE irradiance variations in atmospheric models yields substantially different middle atmosphere ozone responses in both magnitude and vertical structure. However, short-term solar variability derived from SIM and SOLSTICE UV irradiance data is consistent with concurrent solar UV measurements from other instruments, as well as previous results, suggesting no change in solar physics. Our analysis of short-term solar variability is much less sensitive to residual instrument response changes than the observations of long-term variations. The SORCE long-term UV results can be explained by under-correction of instrument response changes during the first few years of measurements

Waveform inversion of lateral velocity variation from wavefield source location perturbation

KAUST Repository

Choi, Yun Seok

2013-09-22

It is challenge in waveform inversion to precisely define the deep part of the velocity model compared to the shallow part. The lateral velocity variation, or what referred to as the derivative of velocity with respect to the horizontal distance, with well log data can be used to update the deep part of the velocity model more precisely. We develop a waveform inversion algorithm to obtain the lateral velocity variation by inverting the wavefield variation associated with the lateral shot location perturbation. The gradient of the new waveform inversion algorithm is obtained by the adjoint-state method. Our inversion algorithm focuses on resolving the lateral changes of the velocity model with respect to a fixed reference vertical velocity profile given by a well log. We apply the method on a simple-dome model to highlight the methods potential.

A Combined First and Second Order Variational Approach for Image Reconstruction

KAUST Repository

Papafitsoros, K.

2013-05-10

In this paper we study a variational problem in the space of functions of bounded Hessian. Our model constitutes a straightforward higher-order extension of the well known ROF functional (total variation minimisation) to which we add a non-smooth second order regulariser. It combines convex functions of the total variation and the total variation of the first derivatives. In what follows, we prove existence and uniqueness of minimisers of the combined model and present the numerical solution of the corresponding discretised problem by employing the split Bregman method. The paper is furnished with applications of our model to image denoising, deblurring as well as image inpainting. The obtained numerical results are compared with results obtained from total generalised variation (TGV), infimal convolution and Euler\\'s elastica, three other state of the art higher-order models. The numerical discussion confirms that the proposed higher-order model competes with models of its kind in avoiding the creation of undesirable artifacts and blocky-like structures in the reconstructed images-a known disadvantage of the ROF model-while being simple and efficiently numerically solvable. ©Springer Science+Business Media New York 2013.

Optimized Variational 1D Boussinesq Modelling for broad-band waves over flat bottom

NARCIS (Netherlands)

Lakhturov, I.; Adytia, D.; van Groesen, Embrecht W.C.

The Variational Boussinesq Model (VBM) for waves above a layer of ideal fluid conserves mass, momentum, energy, and has decreased dimensionality compared to the full problem. It is derived from the Hamiltonian formulation via an approximation of the kinetic energy, and can provide approximate

Melanic variation underlies aposematic color variation in two hymenopteran mimicry systems.

Directory of Open Access Journals (Sweden)

Heather M Hines

Full Text Available The stinging hymenopteran velvet ants (Mutillidae and bumble bees (Apidae: Bombus spp. have both undergone extensive diversification in aposematic color patterns, including yellow-red hues and contrasting dark-light body coloration, as a result of Müllerian mimicry. Understanding the genetic and developmental mechanisms underlying shifts in these mimetic colors requires characterization of their pigmentation. In this study, a combination of solubility, spectrophotometry, and melanin degradation analysis are applied to several color forms and species of these lineages to determine that orange-red colors in both lineages are comprised of primarily dopamine-derived pheomelanins. Until a few recent studies, pheomelanins were thought not to occur in insects. These results support their potential to occur across insects and particularly among the Hymenoptera. Shifts between black and orange-red colors, such as between mimetic color forms of bumble bee Bombus melanopygus, are inferred to involve modification of the ratios of dark eumelanins to red pheomelanins, thus implicating the melanin pathway in mimetic diversification. This discovery highlights the need to focus on how pheomelanins are synthesized in the insect melanin pathway and the potential for new pigments to be found even in some of our most well-known insect systems.

Seasonal variations in shallow Alaska seismicity and stress modulation from GRACE derived hydrological loading

Science.gov (United States)

Johnson, C. W.; Fu, Y.; Burgmann, R.

2017-12-01

Shallow (≤50 km), low magnitude (M≥2.0) seismicity in southern Alaska is examined for seasonal variations during the annual hydrological cycle. The seismicity is declustered with a spatio-temporal epidemic type aftershock sequence (ETAS) model. The removal of aftershock sequences allows detailed investigation of seismicity rate changes, as water and ice loads modulate crustal stresses throughout the year. The GRACE surface loads are obtained from the JPL mass concentration blocks (mascons) global land and ocean solutions. The data product is smoothed with a 9˚ Gaussian filter and interpolated on a 25 km grid. To inform the surface loading model, the global solutions are limited to the region from -160˚ to -120˚ and 50˚ to 70˚. The stress changes are calculated using a 1D spherical layered earth model at depth intervals of 10 km from 10 - 50 km in the study region. To evaluate the induced seasonal stresses, we use >30 years of earthquake focal mechanisms to constrain the background stress field orientation and assess the stress change with respect to the principal stress orientation. The background stress field is assumed to control the preferred orientation of faulting, and stress field perturbations are expected to increase or decrease seismicity. The number of excess earthquakes is calculated with respect to the background seismicity rates. Here, we present preliminary results for the shallow seismicity variations and quantify the seasonal stresses associated with changes in hydrological loading.

Variational principles and Heisenberg matrix mechanics

International Nuclear Information System (INIS)

Klein, A.; Li, C.-T.

1979-01-01

If in Heisenberg's equations of motion for a problem in quantum mechanics (or quantum field theory) one studies matrix elements in the energy representation and by use of completeness conditions expresses the equations solely in terms of matrix elements of the canonical variables, and if one does likewise with the associated kinematical constraints (commutation relations), one arrives at a formulation - largely unexplored hitherto - which can be exploited for both practical and theoretical development. In this contribution, the above theme is developed within the framework of one-dimensional problems. It is shown how this formulation, both dynamics and kinematics, can be derived from a new variational principle, indeed from an entire class of such principles. A powerful method of diagonalizing the Hamiltonians by means of computations utilizing these equations is described. The variational method is shown to be particularly useful for the study of the regime of large quantum numbers. The usual WKB approximation is seen to be contained as well as a basis for the study of systematic corrections to it. Further applications in progress are mentioned. (Auth.)

The geomagnetic jerk of 2003.5-characterisation with regional observatory secular variation data

Science.gov (United States)

Feng, Yan; Holme, Richard; Cox, Grace Alexandra; Jiang, Yi

2018-05-01

The 2003.5 geomagnetic jerk was identified in geomagnetic records from satellite data, and a matching feature reported in variations in length-of-day (ΔLOD), but detailed study has been hampered by lack of geomagnetic observatory data where it appears strongest. Here we examine secular variation (annual differences of monthly means) based on a new resource of 43 Chinese observatory records for 1998 until the present, focusing on 10 series of particularly high quality and consistency. To obtain a clean series, we calculate the covariance matrix of residuals between measurements and a state-of-the-art field model, CHAOS-6, and use eigenvalue analysis to remove noisy contributions from the uncorrected data. The magnitude of the most significant eigenvector correlates well with Dcx (corrected, extended Dst), suggesting the noise originates from unmodelled external magnetic field. Removal of this noise eliminates much coherent misfit around 2003-2005; nevertheless, the 2003.5 jerk is seen clearly in the first time derivative of the East component in Chinese data, and is also seen in the first time derivative of the vertical component in European data. Estimates of the jerk time are centred on 2003.5, but with some spatial variation; this variation can be eliminated if we allow a discontinuity in the secular variation as well as its temporal gradient. Both regions also provide evidence for a jerk around 2014, although less clearly than 2003.5. We create a new field model based on new data and CHAOS-6 to further examine the regional signals. The new model is close to CHAOS-6, but better fits Chinese data, although modelling also identifies some data features as unphysical.

Progress in classical and quantum variational principles

International Nuclear Information System (INIS)

Gray, C G; Karl, G; Novikov, V A

2004-01-01

We review the development and practical uses of a generalized Maupertuis least action principle in classical mechanics in which the action is varied under the constraint of fixed mean energy for the trial trajectory. The original Maupertuis (Euler-Lagrange) principle constrains the energy at every point along the trajectory. The generalized Maupertuis principle is equivalent to Hamilton's principle. Reciprocal principles are also derived for both the generalized Maupertuis and the Hamilton principles. The reciprocal Maupertuis principle is the classical limit of Schroedinger's variational principle of wave mechanics and is also very useful to solve practical problems in both classical and semiclassical mechanics, in complete analogy with the quantum Rayleigh-Ritz method. Classical, semiclassical and quantum variational calculations are carried out for a number of systems, and the results are compared. Pedagogical as well as research problems are used as examples, which include nonconservative as well as relativistic systems. '... the most beautiful and important discovery of Mechanics.' Lagrange to Maupertuis (November 1756)

Estimating carbon flux phenology with satellite-derived land surface phenology and climate drivers for different biomes: a synthesis of AmeriFlux observations.

Directory of Open Access Journals (Sweden)

Wenquan Zhu

Full Text Available Carbon Flux Phenology (CFP can affect the interannual variation in Net Ecosystem Exchange (NEE of carbon between terrestrial ecosystems and the atmosphere. In this study, we proposed a methodology to estimate CFP metrics with satellite-derived Land Surface Phenology (LSP metrics and climate drivers for 4 biomes (i.e., deciduous broadleaf forest, evergreen needleleaf forest, grasslands and croplands, using 159 site-years of NEE and climate data from 32 AmeriFlux sites and MODIS vegetation index time-series data. LSP metrics combined with optimal climate drivers can explain the variability in Start of Carbon Uptake (SCU by more than 70% and End of Carbon Uptake (ECU by more than 60%. The Root Mean Square Error (RMSE of the estimations was within 8.5 days for both SCU and ECU. The estimation performance for this methodology was primarily dependent on the optimal combination of the LSP retrieval methods, the explanatory climate drivers, the biome types, and the specific CFP metric. This methodology has a potential for allowing extrapolation of CFP metrics for biomes with a distinct and detectable seasonal cycle over large areas, based on synoptic multi-temporal optical satellite data and climate data.

Path-space variational inference for non-equilibrium coarse-grained systems

International Nuclear Information System (INIS)

Harmandaris, Vagelis; Kalligiannaki, Evangelia; Katsoulakis, Markos; Plecháč, Petr

2016-01-01

In this paper we discuss information-theoretic tools for obtaining optimized coarse-grained molecular models for both equilibrium and non-equilibrium molecular simulations. The latter are ubiquitous in physicochemical and biological applications, where they are typically associated with coupling mechanisms, multi-physics and/or boundary conditions. In general the non-equilibrium steady states are not known explicitly as they do not necessarily have a Gibbs structure. The presented approach can compare microscopic behavior of molecular systems to parametric and non-parametric coarse-grained models using the relative entropy between distributions on the path space and setting up a corresponding path-space variational inference problem. The methods can become entirely data-driven when the microscopic dynamics are replaced with corresponding correlated data in the form of time series. Furthermore, we present connections and generalizations of force matching methods in coarse-graining with path-space information methods. We demonstrate the enhanced transferability of information-based parameterizations to different observables, at a specific thermodynamic point, due to information inequalities. We discuss methodological connections between information-based coarse-graining of molecular systems and variational inference methods primarily developed in the machine learning community. However, we note that the work presented here addresses variational inference for correlated time series due to the focus on dynamics. The applicability of the proposed methods is demonstrated on high-dimensional stochastic processes given by overdamped and driven Langevin dynamics of interacting particles.

Path-space variational inference for non-equilibrium coarse-grained systems

Energy Technology Data Exchange (ETDEWEB)

Harmandaris, Vagelis, E-mail: harman@uoc.gr [Department of Mathematics and Applied Mathematics, University of Crete (Greece); Institute of Applied and Computational Mathematics (IACM), Foundation for Research and Technology Hellas (FORTH), IACM/FORTH, GR-71110 Heraklion (Greece); Kalligiannaki, Evangelia, E-mail: ekalligian@tem.uoc.gr [Department of Mathematics and Applied Mathematics, University of Crete (Greece); Katsoulakis, Markos, E-mail: markos@math.umass.edu [Department of Mathematics and Statistics, University of Massachusetts at Amherst (United States); Plecháč, Petr, E-mail: plechac@math.udel.edu [Department of Mathematical Sciences, University of Delaware, Newark, Delaware (United States)

2016-06-01

In this paper we discuss information-theoretic tools for obtaining optimized coarse-grained molecular models for both equilibrium and non-equilibrium molecular simulations. The latter are ubiquitous in physicochemical and biological applications, where they are typically associated with coupling mechanisms, multi-physics and/or boundary conditions. In general the non-equilibrium steady states are not known explicitly as they do not necessarily have a Gibbs structure. The presented approach can compare microscopic behavior of molecular systems to parametric and non-parametric coarse-grained models using the relative entropy between distributions on the path space and setting up a corresponding path-space variational inference problem. The methods can become entirely data-driven when the microscopic dynamics are replaced with corresponding correlated data in the form of time series. Furthermore, we present connections and generalizations of force matching methods in coarse-graining with path-space information methods. We demonstrate the enhanced transferability of information-based parameterizations to different observables, at a specific thermodynamic point, due to information inequalities. We discuss methodological connections between information-based coarse-graining of molecular systems and variational inference methods primarily developed in the machine learning community. However, we note that the work presented here addresses variational inference for correlated time series due to the focus on dynamics. The applicability of the proposed methods is demonstrated on high-dimensional stochastic processes given by overdamped and driven Langevin dynamics of interacting particles.

Nutrient Deprivation Induces Property Variations in Spider Gluey Silk

Science.gov (United States)

Blamires, Sean J.; Sahni, Vasav; Dhinojwala, Ali; Blackledge, Todd A.; Tso, I-Min

2014-01-01

Understanding the mechanisms facilitating property variability in biological adhesives may promote biomimetic innovations. Spider gluey silks such as the spiral threads in orb webs and the gumfoot threads in cobwebs, both of which comprise of an axial thread coated by glue, are biological adhesives that have variable physical and chemical properties. Studies show that the physical and chemical properties of orb web gluey threads change when spiders are deprived of food. It is, however, unknown whether gumfoot threads undergo similar property variations when under nutritional stress. Here we tested whether protein deprivation induces similar variations in spiral and gumfoot thread morphology and stickiness. We manipulated protein intake for the orb web spider Nephila clavipes and the cobweb spider Latrodectus hesperus and measured the diameter, glue droplet volume, number of droplets per mm, axial thread width, thread stickiness and adhesive energy of their gluey silks. We found that the gluey silks of both species were stickier when the spiders were deprived of protein than when the spiders were fed protein. In N. clavipes a concomitant increase in glue droplet volume was found. Load-extension curves showed that protein deprivation induced glue property variations independent of the axial thread extensions in both species. We predicted that changes in salt composition of the glues were primarily responsible for the changes in stickiness of the silks, although changes in axial thread properties might also contribute. We, additionally, showed that N. clavipes' glue changes color under protein deprivation, probably as a consequence of changes to its biochemical composition. PMID:24523902

Renminbi Derivatives: Recent Development and Issues

Institute of Scientific and Technical Information of China (English)

Wensheng Peng; Chang Shu; Raymond Yip

2007-01-01

This study reviews the developments in the onshore and offshore renminbi derivatives markets. The onshore market has seen a rapid build-up in the market infrastructure and price discovery mechanism in the past year, with empirical evidence suggesting that its pricing is increasingly determined by financial fundamentals, such as the covered interest rate parity. However, the growth of the market has been restrained by restrictions on the participant base, limited variations in the RMB/US$ exchange rate, market participants'lack of technical capacity and experience, and inadequate supporting financial market infrastructure. The non-deliverable forward (NDF) market, concentrated in Hong Kong and Singapore, is more developed, but has the drawback that its pricing is not tied to financial fundamentals. The comparison between onshore and offshore markets suggests that two issues are of particular importance for future derivatives market development in China: the balance between regulation and development, and the relationship between onshore and offshore markets.

Genetically-based olfactory signatures persist despite dietary variation.

Directory of Open Access Journals (Sweden)

Jae Kwak

Full Text Available Individual mice have a unique odor, or odortype, that facilitates individual recognition. Odortypes, like other phenotypes, can be influenced by genetic and environmental variation. The genetic influence derives in part from genes of the major histocompatibility complex (MHC. A major environmental influence is diet, which could obscure the genetic contribution to odortype. Because odortype stability is a prerequisite for individual recognition under normal behavioral conditions, we investigated whether MHC-determined urinary odortypes of inbred mice can be identified in the face of large diet-induced variation. Mice trained to discriminate urines from panels of mice that differed both in diet and MHC type found the diet odor more salient in generalization trials. Nevertheless, when mice were trained to discriminate mice with only MHC differences (but on the same diet, they recognized the MHC difference when tested with urines from mice on a different diet. This indicates that MHC odor profiles remain despite large dietary variation. Chemical analyses of urinary volatile organic compounds (VOCs extracted by solid phase microextraction (SPME and analyzed by gas chromatography/mass spectrometry (GC/MS are consistent with this inference. Although diet influenced VOC variation more than MHC, with algorithmic training (supervised classification MHC types could be accurately discriminated across different diets. Thus, although there are clear diet effects on urinary volatile profiles, they do not obscure MHC effects.

The variation of interstellar element abundances with hydrogen density

International Nuclear Information System (INIS)

Keenan, F.P.; Hibbert, A.; Dufton, P.L.; Murray, M.J.

1986-01-01

The variation of the interstellar nitrogen, oxygen and magnesium abundances with mean line-of-sight hydrogen density is analysed in terms of a two-component model, which consists of warm, low-density neutral gas and cold clouds. In all cases the gas-phase abundances have been deduced using reliable oscillator strengths specifically calculated for this purpose. Depletions in the warm and cold gas, are derived from non-linear least-squares fits to the data. (author)

Plant derived antioxidants and antifibrotic drugs: past, present and future

Directory of Open Access Journals (Sweden)

Devaraj Ezhilarasan

2014-09-01

Full Text Available Hepatic fibrosis occurs as a wound-healing process after several forms of chronic hepatic injury. Activation and proliferation of hepatic stellate cells play pivotal role in the pathogenesis of hepatic fibrosis. Many researchers, from the therapeutic perspective, have focused their attention on searching for novel agents with inhibitory effects on hepatic stellate cells proliferation and activation to prevent hepatic fibrogenesis and a number of plant derived antioxidants have been tested as anti-fibrogenic agents, they generally suppress proliferation and collagen synthesis. Plants remain an imperative source of novel drugs, novel drug leads and new chemical entities. The plant based drug discovery resulted primarily in the development of antioxidant, anti-cancer and other anti-infectious agents and continues to contribute to the new leads in clinical trials. This review summarizes some of those most important plant derived anti-fibrotic drugs and their beneficial effects on experimentally induced hepatic fibrosis in vitro and in vivo. The plant derived antioxidant compounds described herein are curcumin, silymarin, silibinin, baicalein, resveratrol, salvianolic acids, tetrandine, quercetin and berberine. Studies from ours and as demonstrated by pervious workers much information has been accumulated over the past two decades through in vivo and in vitro. In light of those studies, it has been confirmed that plants derived antioxidants, particularly flavanoids, show a significant influence to block hepatic fibrosis regardless of any etiology. This review outlines recent progress in the use of plant derived drugs against experimentally induced liver fibrosis by in vitro and in vivo studies and summarizes the possible mechanisms anti-fibrotic effects of these compounds.

Podocytes degrade endocytosed albumin primarily in lysosomes.

Science.gov (United States)

Carson, John M; Okamura, Kayo; Wakashin, Hidefumi; McFann, Kim; Dobrinskikh, Evgenia; Kopp, Jeffrey B; Blaine, Judith

2014-01-01

Albuminuria is a strong, independent predictor of chronic kidney disease progression. We hypothesize that podocyte processing of albumin via the lysosome may be an important determinant of podocyte injury and loss. A human urine derived podocyte-like epithelial cell (HUPEC) line was used for in vitro experiments. Albumin uptake was quantified by Western blot after loading HUPECs with fluorescein-labeled (FITC) albumin. Co-localization of albumin with lysosomes was determined by confocal microscopy. Albumin degradation was measured by quantifying FITC-albumin abundance in HUPEC lysates by Western blot. Degradation experiments were repeated using HUPECs treated with chloroquine, a lysosome inhibitor, or MG-132, a proteasome inhibitor. Lysosome activity was measured by fluorescence recovery after photo bleaching (FRAP). Cytokine production was measured by ELISA. Cell death was determined by trypan blue staining. In vivo, staining with lysosome-associated membrane protein-1 (LAMP-1) was performed on tissue from a Denys-Drash trangenic mouse model of nephrotic syndrome. HUPECs endocytosed albumin, which co-localized with lysosomes. Choloroquine, but not MG-132, inhibited albumin degradation, indicating that degradation occurs in lysosomes. Cathepsin B activity, measured by FRAP, significantly decreased in HUPECs exposed to albumin (12.5% of activity in controls) and chloroquine (12.8%), and declined further with exposure to albumin plus chloroquine (8.2%, plysosomes are involved in the processing of endocytosed albumin in podocytes, and lysosomal dysfunction may contribute to podocyte injury and glomerulosclerosis in albuminuric diseases. Modifiers of lysosomal activity may have therapeutic potential in slowing the progression of glomerulosclerosis by enhancing the ability of podocytes to process and degrade albumin.

Synthesis and Cellular Uptake of Radioiodine labeled 2{sup '}-deoxyuridine derivatives with HSV1-TK

Energy Technology Data Exchange (ETDEWEB)

Lee, Eun Ah; Lee, Kyo Chul; Hong, Su Hee; Kim, Eun Jung; Lee, Jong Chan; An, Gwang Il; Choi, Tae Hyun; Cheon, Gi Jeong; Chun, Kwon Soo [Korea Institute of Radiological and Medical Sciences, Seoul (Korea, Republic of)

2006-07-01

Several different radiolabeled probes have been developed to image Herpes Simplex Virus Type-1 thyrimidine kinase gene (HSV1-TK) expression. The nucleoside prodrugs under investigation for HSV1-TK imaging generally fall into two main chemical and radioisotope categories: the pyrimidine nucleosides, primarily radioiodinated, and the purin nucleosides, primarily radiofluorinated, and their respective analogues. In non-invasive imaging of the HSV1-TK system, many nucleoside derivatives have been recommended as HSV1-TK substrates. Most of these nucleoside derivatives have been developed as prodrugs for tumor proliferation imaging or as anti-viral drugs. For example, 5-fluorouracil (5-FU) and IUdR have been used as tumor agents and acyclovir (ACV), ganciclovir (GCV) and (E)-5-(2-bromovinyl)-2{sup '}- deoxyuridine (BVDU) as an anti-viral agents for virus infection several 5-substituted uracil nucleoside derivatives have been identified to have high sensitivity and selective accumulation in HSV1-TK expressing cells. Of those, IVDU was shown to be rapidly accumulated in HSV1- TK expressing cells in vitro. Imaging of the HSV1-TK reporter gene along with various reporter probes is of current interest. In contrast to the mammalian kinase, which phosphorylates thymidine preferentially, HSV1-TK is less discriminative and phosphorylates a wide range of nucleoside analogues such as acycloguanosines and 2{sup '}-fluoro-2{sup '}-deoxyuridine derivatives that are not phosphorylated efficiently by the native enzyme. More specifically, 5-substituted 2{sup '}-fluoro-2{sup '}-deoxyarabinofuranosyluracil nucleosides are efficiently phosphorylated by HSV- TK. This property, together with the presence of fluorine in the 2{sup '}-arabino-position, endows the 2{sup '}-fluoro-2{sup '}-deoxyuridines with antiviral activity against HSV.

Genetic variation in glia-neuron signalling modulates ageing rate.

Science.gov (United States)

Yin, Jiang-An; Gao, Ge; Liu, Xi-Juan; Hao, Zi-Qian; Li, Kai; Kang, Xin-Lei; Li, Hong; Shan, Yuan-Hong; Hu, Wen-Li; Li, Hai-Peng; Cai, Shi-Qing

2017-11-08

The rate of behavioural decline in the ageing population is remarkably variable among individuals. Despite the considerable interest in studying natural variation in ageing rate to identify factors that control healthy ageing, no such factor has yet been found. Here we report a genetic basis for variation in ageing rates in Caenorhabditis elegans. We find that C. elegans isolates show diverse lifespan and age-related declines in virility, pharyngeal pumping, and locomotion. DNA polymorphisms in a novel peptide-coding gene, named regulatory-gene-for-behavioural-ageing-1 (rgba-1), and the neuropeptide receptor gene npr-28 influence the rate of age-related decline of worm mating behaviour; these two genes might have been subjected to recent selective sweeps. Glia-derived RGBA-1 activates NPR-28 signalling, which acts in serotonergic and dopaminergic neurons to accelerate behavioural deterioration. This signalling involves the SIR-2.1-dependent activation of the mitochondrial unfolded protein response, a pathway that modulates ageing. Thus, natural variation in neuropeptide-mediated glia-neuron signalling modulates the rate of ageing in C. elegans.

Temperature Dependent Variations of Phonon Interactions in Nanocrystalline Cerium Oxide

Directory of Open Access Journals (Sweden)

Sugandha Dogra Pandey

2015-01-01

Full Text Available The temperature dependent anharmonic behavior of the phonon modes of nanocrystalline CeO2 was investigated in the temperature range of 80–440 K. The anharmonic constants have been derived from the shift in phonon modes fitted to account for the anharmonic contributions as well as the thermal expansion contribution using the high pressure parameters derived from our own high pressure experimental data reported previously. The total anharmonicity has also been estimated from the true anharmonicity as well as quasiharmonic component. In the line-width variation analysis, the cubic anharmonic term was found to dominate the quartic term. Finally, the phonon lifetime also reflected the trend so observed.

Temporal variations of natural soil salinity in an arid environment using satellite images

Science.gov (United States)

Gutierrez, M.; Johnson, E.

2010-11-01

In many remote arid areas the scarce amount of conventional soil salinity data precludes detailed analyses of salinity variations for the purpose of predicting its impact on agricultural production. A tool that is an appropriate surrogate for on-ground testing in determining temporal variations of soil salinity is Landsat satellite data. In this study six Landsat scenes over El Cuervo, a closed basin adjacent to the middle Rio Conchos basin in northern Mexico, were used to show temporal variation of natural salts from 1986 to 2005. Natural salts were inferred from ground reference data and spectral responses. Transformations used were Tasseled Cap, Principal Components and several (band) ratios. Classification of each scene was performed from the development of Regions Of Interest derived from geochemical data collected by SGM, spectral responses derived from ENVI software, and a small amount of field data collected by the authors. The resultant land cover classes showed a relationship between climatic drought and areal coverage of natural salts. When little precipitation occurred three months prior to the capture of the Landsat scene, approximately 15%-20% of the area was classified as salt. This is compared to practically no classified salt in the wetter years of 1992 and 2005 Landsat scenes.

The Impact of Temporal Geopotential Variations on GPS

Science.gov (United States)

Melachroinos, Stavros; Lemoine, Frank G.; Zelensky, Nikita P.; Beckley, Brian D.; Chinn, Douglas S.; Nicholas, Joseph B.; McCarthy, John J.; Pennington, Teresa; Luthcke, Scott B.

2012-01-01

Lemoine et al. (2006) and Lemoine et al. (2010) showed that applying more detailed models of time-variable gravity (TVG) improved the quality of the altimeter satellite orbits (e.g. TOPEX/Poseidon, Jason-1, Jason-2). This modeling include application of atmospheric gravity derived from 6-hrly pressure fields obtained from the ECMWF and annual gravity variations to degree & order 20x20 in spherical harmonics derived from GRACE data. This approach allowed the development of a consistent geophysical model for application to altimeter satellite orbit determination from 1993 to 2011. In addition, we have also evaluated the impact of TVG modeling on the POD of Jason-1 and Jason-2 by application of a weekly degree & order four gravity coefficient time series developed using data from ten SLR & DORIS-tracked satellites from 1993 to 2011 (Lemoine et al., 2011).

SPECTRAL VARIATIONS OF Of?p OBLIQUE MAGNETIC ROTATOR CANDIDATES IN THE MAGELLANIC CLOUDS

Energy Technology Data Exchange (ETDEWEB)

Walborn, Nolan R. [Space Telescope Science Institute, 3700 San Martin Drive, Baltimore, MD 21218 (United States); Morrell, Nidia I. [Las Campanas Observatory, Carnegie Observatories, Casilla 601, La Serena (Chile); Nazé, Yaël [GAPHE, Département AGO, Université de Liège, Allée du 6 Août 19c, Bat. B5C, B-4000-Liège (Belgium); Wade, Gregg A. [Department of Physics, Royal Military College of Canada, P.O. Box 17000 Station Forces, Kingston, ON, Canada K7K 7B4 (Canada); Bagnulo, Stefano [Armagh Observatory, College Hill, Armagh BT61 9DG (United Kingdom); Barbá, Rodolfo H. [Departamento de Física y Astronomía, Universidad de La Serena, Cisternas 1200 Norte, La Serena (Chile); Apellániz, Jesús Maíz [Centro de Astrobiología, CSIC-INTA, Campus ESAC, Apartado Postal 78, E-28691 Villanueva de la Cañada, Madrid (Spain); Howarth, Ian D. [Department of Physics and Astronomy, University College London, Gower Street, London WC1E 6BT (United Kingdom); Evans, Christopher J. [UK Astronomy Technology Centre, Royal Observatory Edinburgh, Blackford Hill, Edinburgh EH9 3HJ (United Kingdom); Sota, Alfredo, E-mail: walborn@stsci.edu, E-mail: nmorrell@lco.cl, E-mail: naze@astro.ulg.ac.be, E-mail: wade-g@rmc.ca, E-mail: sba@arm.ac.uk, E-mail: rbarba@dfuls.cl, E-mail: jmaiz@cab.inta-csic.es, E-mail: idh@star.ucl.ac.uk [Instituto de Astrofísica de Andalucía—CSIC, Glorieta de la Astronomía s/n, E-18008 Granada (Spain)

2015-10-15

Optical spectroscopic monitoring has been conducted of two O stars in the SMC and one in the LMC, the spectral characteristics of which place them in the Of?p category, which has been established in the Galaxy to consist of oblique magnetic rotators. All of these Magellanic stars show systematic spectral variations typical of the Of?p class, further strengthening their magnetic candidacy to the point of virtual certainty. The spectral variations are related to photometric variations derived from Optical Gravitational Lensing Experiment data by Nazé et al. in a parallel study, which yields rotational periods for two of them. Now circular spectropolarimetry is required to measure their fields, and ultraviolet spectroscopy to further characterize their low-metallicity, magnetically confined winds, in support of hydrodynamical analyses.

SPECTRAL VARIATIONS OF Of?p OBLIQUE MAGNETIC ROTATOR CANDIDATES IN THE MAGELLANIC CLOUDS

International Nuclear Information System (INIS)

Walborn, Nolan R.; Morrell, Nidia I.; Nazé, Yaël; Wade, Gregg A.; Bagnulo, Stefano; Barbá, Rodolfo H.; Apellániz, Jesús Maíz; Howarth, Ian D.; Evans, Christopher J.; Sota, Alfredo

2015-01-01

Optical spectroscopic monitoring has been conducted of two O stars in the SMC and one in the LMC, the spectral characteristics of which place them in the Of?p category, which has been established in the Galaxy to consist of oblique magnetic rotators. All of these Magellanic stars show systematic spectral variations typical of the Of?p class, further strengthening their magnetic candidacy to the point of virtual certainty. The spectral variations are related to photometric variations derived from Optical Gravitational Lensing Experiment data by Nazé et al. in a parallel study, which yields rotational periods for two of them. Now circular spectropolarimetry is required to measure their fields, and ultraviolet spectroscopy to further characterize their low-metallicity, magnetically confined winds, in support of hydrodynamical analyses

Community patterns of tropical tree phenology derived from Unmanned Aerial Vehicle images: intra- and interspecific variation, association with species plant traits, and response to interannual climate variation

Science.gov (United States)

Bohlman, Stephanie; Rifai, Sami; Park, John; Dandois, Jonathan; Muller-Landau, Helene

2017-04-01

Phenology is a key life history trait of plant species and critical driver of ecosystem processes. There is strong evidence that phenology is shifting in temperate ecosystems in response to climate change, but tropical forest phenology remains poorly quantified and understood. A key challenge is that tropical forests contain hundreds of plant species with a wide variety of phenological patterns, which makes it difficult to collect sufficient ground-based field data to characterize individual tropical tree species phenologies. Satellite-based observations, an important source of phenology data in northern latitudes, are hindered by frequent cloud cover in the tropics. To quantify phenology over a large number of individuals and species, we collected bi-weekly images from unmanned aerial vehicles (UAVs) in the well-studied 50-ha forest inventory plot on Barro Colorado Island, Panama. The objective of this study is to quantify inter- and intra-specific responses of tropical tree leaf phenology to environmental variation over large spatial scales and identify key environmental variables and physiological mechanisms underpinning phenological variation. Between October 2014 and December 2015 and again in May 2015, we collected a total of 35 sets of UAV images, each with continuous coverage of the 50-ha plot, where every tree ≥ 1 cm DBH is mapped. UAV imagery was corrected for exposure, orthorectified, and then processed to extract spectral, texture, and image information for individual tree crowns, which was then used as inputs for a machine learning algorithm that successfully predicted the percentages of leaf, branch, and flower cover for each tree crown (r2=0.76 between observed and predicted percent branch cover for individual tree crowns). We then quantified cumulative annual deciduousness for each crown by fitting a non-parametric curve of flexible shape to its predicted percent branch time series and calculated the area under the curve. We obtained the species

Geochemical Variation of Subducting Pacific Crust Along the Izu-Bonin Arc System and its Implications on the Generation of Arc Magmas

Science.gov (United States)

Durkin, K.; Castillo, P.; Abe, N.; Kaneko, R.; Straub, S. M.; Garcia, E. S. M.; Yan, Q.; Tamura, Y.

2015-12-01

Subduction zone magmatism primarily occurs due to flux melting of the mantle wedge that has been metasomatized by the slab component. The latter is enriched in volatiles and fluid-mobile elements and derived mainly from subducted sediments and altered oceanic crust (AOC). Subduction input has been linked to arc output in many studies, but this relationship is especially well documented in sedimented arc-trench systems. However, the Izu-Bonin system is sediment-poor, therefore the compositional and latitudinal variations (especially in Pb isotopes) of its arc magmas must be sourced from the subduction component originating primarily from the AOC. Pb is a very good tracer of recycled AOC that may contribute 50% or more of arc magma Pb. Izu-Bonin arc chemistry suggests a subduction influx of Indian-type crust, but the subducting crust sampled at ODP Site 1149 is Pacific-type. The discrepancy between subduction input and arc output calls into question the importance of the AOC as a source of the subduction component, and raises major concerns with our understanding of slab input. During the R/V Revelle 1412 cruise in late 2014, we successfully dredged vertical fault scarps at several sites from 27.5 N to 34.5 N, spanning a range of crustal ages that include a suggested compositional change at ~125 Ma. Major element data show an alkali enrichment towards the north of the study transect. Preliminary incompatible trace element data (e.g. Ba, Zr and Sr) data support this enrichment trend. Detailed mass balance calculations supported by Sr, Nd, Hf and especially Pb isotope analyses will be performed to evaluate whether the AOC controls the Pb isotope chemistry of the Izu-Bonin volcanic arc.

Complementary variational principle method applied to thermal conductivities of a plasma in a uniform magnetic field

Energy Technology Data Exchange (ETDEWEB)

Sehgal, A K; Gupta, S C [Punjabi Univ., Patiala (India). Dept. of Physics

1982-12-14

The complementary variational principles method (CVP) is applied to the thermal conductivities of a plasma in a uniform magnetic field. The results of computations show that the CVP derived results are very useful.

Evaluating acute medical admissions through emergency departments in Hong Kong: can one adjust for case-mix variation?

Science.gov (United States)

Rainer, T H; Sollich, P; Piotrowski, T; Coolen, A C C; Cheng, B; Graham, C A

2012-12-01

Healthcare systems are under pressure to efficiently and safely reduce acute care admissions to hospital. There is a need to develop a standardised system for assessing emergency department performance which takes into account case-mix variation. The objective of this study was to derive and validate a standardised tool for assessing variations in medical admissions through emergency departments in Hong Kong. Retrospective study of patients attending emergency departments of 14 acute hospitals in Hong Kong. Data were retrieved from a centralised administrative database. Of 2,531,225 patients who attended emergency departments between 1 January 2001 and 31 December 2003, 780,444 (30.8%) were admitted to medical wards. A model derived from 2001 data shows well-calibrated admission probabilities, with an area under the receiver operating characteristic curve for probability of admission of 90.3 (95% CI ±0.11). The areas under the receiver operating characteristic curves for 2002 and 2003 validation sets were 89.9 (95% CI ±0.11) and 89.0 (95% CI ±0.12), respectively. With an averaged benchmark, reductions in medical admissions of up to 19% could be achieved, while under the most optimistic assumption, reductions of up 36% could be achieved. A tool for benchmarking hospital medical admissions and minimising case-mix variation has been derived and validated in Hong Kong, but it requires further validation in other healthcare systems given the wide variations in admission thresholds internationally. This may be used as one potential method to evaluate the performance of emergency departments against a common standard.

Effects of land cover and regional climate variations on long-term spatiotemporal changes in sagebrush ecosystems

Science.gov (United States)

Xian, George Z.; Homer, Collin G.; Aldridge, Cameron L.

2012-01-01

This research investigated the effects of climate and land cover change on variation in sagebrush ecosystems. We combined information of multi-year sagebrush distribution derived from multitemporal remote sensing imagery and climate data to study the variation patterns of sagebrush ecosystems under different potential disturbances. We found that less than 40% of sagebrush ecosystem changes involved abrupt changes directly caused by landscape transformations and over 60% of the variations involved gradual changes directly related to climatic perturbations. The primary increases in bare ground and declines in sagebrush vegetation abundance were significantly correlated with the 1996-2006 decreasing trend in annual precipitation.

H(infinity)/H(2)/Kalman filtering of linear dynamical systems via variational techniques with applications to target tracking

Science.gov (United States)

Rawicz, Paul Lawrence

In this thesis, the similarities between the structure of the H infinity, H2, and Kalman filters are examined. The filters used in this examination have been derived through duality to the full information controller. In addition, a direct variation of parameters derivation of the Hinfinity filter is presented for both continuous and discrete time (staler case). Direct and controller dual derivations using differential games exist in the literature and also employ variational techniques. Using a variational, rather than a differential games, viewpoint has resulted in a simple relationship between the Riccati equations that arise from the derivation and the results of the Bounded Real Lemma. This same relation has previously been found in the literature and used to relate the Riccati inequality for linear systems to the Hamilton Jacobi inequality for nonlinear systems when implementing the Hinfinity controller. The Hinfinity, H2, and Kalman filters are applied to the two-state target tracking problem. In continuous time, closed form analytic expressions for the trackers and their performance are determined. To evaluate the trackers using a neutral, realistic, criterion, the probability of target escape is developed. That is, the probability that the target position error will be such that the target is outside the radar beam width resulting in a loss of measurement. In discrete time, a numerical example, using the probability of target escape, is presented to illustrate the differences in tracker performance.

Variational methods for chemical and nuclear reactions

International Nuclear Information System (INIS)

Crawford, O.H.

1977-01-01

All the variational functionals are derived which satisfy certain criteria of suitability for molecular and nuclear scattering, below the threshold energy for three-body breakup. The existence and uniqueness of solutions are proven. The most general suitable functional is specialized, by particular values of its parameters, to Kohn's taneta, Kato's cot(eta-theta), the inverse Kohn coeta, Kohn's S matrix, our S matrix, Lane and Robson's functional, and several new functionals, an infinite number of which are contained in the general expression. Four general ways of deriving algebraic methods from a given functional are discussed, and illustrated with specific algebraic results. These include equations of Lane and Robson and of Kohn, the fundamental R matrix relation, and new equations. The relative configuration space is divided as in the Wigner R matrix theory, and trial wavefunctions are needed for only the region where all the particles are interacting. In addition, a version of the general functional is presented which does not require any division of space

Own-wage labor supply elasticities: variation across time and estimation methods

Directory of Open Access Journals (Sweden)

Olivier Bargain

2016-10-01

Full Text Available Abstract There is a huge variation in the size of labor supply elasticities in the literature, which hampers policy analysis. While recent studies show that preference heterogeneity across countries explains little of this variation, we focus on two other important features: observation period and estimation method. We start with a thorough survey of existing evidence for both Western Europe and the USA, over a long period and from different empirical approaches. Then, our meta-analysis attempts to disentangle the role of time changes and estimation methods. We highlight the key role of time changes, documenting the incredible fall in labor supply elasticities since the 1980s not only for the USA but also in the EU. In contrast, we find no compelling evidence that the choice of estimation method explains variation in elasticity estimates. From our analysis, we derive important guidelines for policy simulations.

Gauge properties of the guiding center variational symplectic integrator

International Nuclear Information System (INIS)

Squire, J.; Tang, W. M.; Qin, H.

2012-01-01

Variational symplectic algorithms have recently been developed for carrying out long-time simulation of charged particles in magnetic fields [H. Qin and X. Guan, Phys. Rev. Lett. 100, 035006 (2008); H. Qin, X. Guan, and W. Tang, Phys. Plasmas (2009); J. Li, H. Qin, Z. Pu, L. Xie, and S. Fu, Phys. Plasmas 18, 052902 (2011)]. As a direct consequence of their derivation from a discrete variational principle, these algorithms have very good long-time energy conservation, as well as exactly preserving discrete momenta. We present stability results for these algorithms, focusing on understanding how explicit variational integrators can be designed for this type of system. It is found that for explicit algorithms, an instability arises because the discrete symplectic structure does not become the continuous structure in the t→0 limit. We examine how a generalized gauge transformation can be used to put the Lagrangian in the “antisymmetric discretization gauge,” in which the discrete symplectic structure has the correct form, thus eliminating the numerical instability. Finally, it is noted that the variational guiding center algorithms are not electromagnetically gauge invariant. By designing a model discrete Lagrangian, we show that the algorithms are approximately gauge invariant as long as A and φ are relatively smooth. A gauge invariant discrete Lagrangian is very important in a variational particle-in-cell algorithm where it ensures current continuity and preservation of Gauss’s law [J. Squire, H. Qin, and W. Tang (to be published)].

Energetic Variational Approach to Multi-Component Fluid Flows

Science.gov (United States)

Kirshtein, Arkadz; Liu, Chun; Brannick, James

2017-11-01

In this talk I will introduce the systematic energetic variational approach for dissipative systems applied to multi-component fluid flows. These variational approaches are motivated by the seminal works of Rayleigh and Onsager. The advantage of this approach is that we have to postulate only energy law and some kinematic relations based on fundamental physical principles. The method gives a clear, quick and consistent way to derive the PDE system. I will compare different approaches to three-component flows using diffusive interface method and discuss their advantages and disadvantages. The diffusive interface method is an approach for modeling interactions among complex substances. The main idea behind this method is to introduce phase field labeling functions in order to model the contact line by smooth change from one type of material to another. The work of Arkadz Kirshtein and Chun Liu is partially supported by NSF Grants DMS-141200 and DMS-1216938.

Calculus of variations in rate of reactions tax using the general pertubation theory

International Nuclear Information System (INIS)

Silva, F.C. da.

1981-02-01

A perturbation expression to calculate the variations in the rates of integral parameters (such as reaction rates) of a reactor using a Time-Independent Generalized Perturbation Theory, was developed. This theory makes use of the concepts of neutron generation and neutron importance with respect to a given process occurring in a system. The application of Time-Dependent Generalized Perturbation Theory to the calculation of Burnup, by using the expressions derived by A. Gandini, along with the perturbation expression derived in the Time Independent Generalized Perturbation Theory, is done. (Author) [pt

Ionospheric and induced field leakage in geomagnetic field models, and derivation of candidate models for DGRF 1995 and DGRF 2000

DEFF Research Database (Denmark)

Olsen, Nils; Lowes, F.; Sabaka, T.J.

2005-01-01

the zonal coefficients g(1)(0), g(3)(0),..., by 1-2 nT. We describe the reason for this contamination, and present a method to correct for it. Since not only OSVM but probably all main field models that are derived primarily from data around local midnight suffer from this effect, the presented scheme can...

General quantitative analysis of stress partitioning and boundary conditions in undrained biphasic porous media via a purely macroscopic and purely variational approach

Science.gov (United States)

Serpieri, Roberto; Travascio, Francesco

2016-03-01

In poroelasticity, the effective stress law relates the external stress applied to the medium to the macroscopic strain of the solid phase and the interstitial pressure of the fluid saturating the mixture. Such relationship has been formerly introduced by Terzaghi in form of a principle. To date, no poroelastic theory is capable of recovering a stress partitioning law in agreement with Terzaghi's postulated one in the absence of ad hoc constitutive assumptions on the medium. We recently proposed a variational macroscopic continuum description of two-phase poroelasticity to derive a general biphasic formulation at finite deformations, termed variational macroscopic theory of porous media (VMTPM). Such approach proceeds from the inclusion of the intrinsic volumetric strain among the kinematic descriptors aside to macroscopic displacements, and as a variational theory, uses the Hamilton least-action principle as the unique primitive concept of mechanics invoked to derive momentum balance equations. In a previous related work it was shown that, for the subclass of undrained problems, VMTPM predicts that stress is partitioned in the two phases in strict compliance with Terzaghi's law, irrespective of the microstructural and constitutive features of a given medium. In the present contribution, we further develop the linearized framework of VMTPM to arrive at a general operative formula that allows the quantitative determination of stress partitioning in a jacketed test over a generic isotropic biphasic specimen. This formula is quantitative and general, in that it relates the partial phase stresses to the externally applied stress as function of partitioning coefficients that are all derived by strictly following a purely variational and purely macroscopic approach, and in the absence of any specific hypothesis on the microstructural or constitutive features of a given medium. To achieve this result, the stiffness coefficients of the theory are derived by using

Dual Quaternion Variational Integrator for Rigid Body Dynamic Simulation

OpenAIRE

Xu, Jiafeng; Halse, Karl Henning

2016-01-01

In rigid body dynamic simulations, often the algorithm is required to deal with general situations where both reference point and inertia matrix are arbitrarily de- fined. We introduce a novel Lie group variational integrator using dual quaternion for simulating rigid body dynamics in all six degrees of freedom. Dual quaternion is used to represent rigid body kinematics and one-step Lie group method is used to derive dynamic equations. The combination of these two becomes the first Lie group ...

Variational identities and Hamiltonian structures

International Nuclear Information System (INIS)

Ma Wenxiu

2010-01-01

This report is concerned with Hamiltonian structures of classical and super soliton hierarchies. In the classical case, basic tools are variational identities associated with continuous and discrete matrix spectral problems, targeted to soliton equations derived from zero curvature equations over general Lie algebras, both semisimple and non-semisimple. In the super case, a supertrace identity is presented for constructing Hamiltonian structures of super soliton equations associated with Lie superalgebras. We illustrate the general theories by the KdV hierarchy, the Volterra lattice hierarchy, the super AKNS hierarchy, and two hierarchies of dark KdV equations and dark Volterra lattices. The resulting Hamiltonian structures show the commutativity of each hierarchy discussed and thus the existence of infinitely many commuting symmetries and conservation laws.

Meta-Analysis of Mitochondrial DNA Variation in the Iberian Peninsula.

Directory of Open Access Journals (Sweden)

Ruth Barral-Arca

Full Text Available The Iberian Peninsula has been the focus of attention of numerous studies dealing with mitochondrial DNA (mtDNA variation, most of them targeting the control region segment. In the present study we sequenced the control region of 3,024 Spanish individuals from areas where available data were still limited. We also compiled mtDNA haplotypes from the literature involving 4,588 sequences and 28 population groups or small regions. We meta-analyzed all these data in order to shed further light on patterns of geographic variation, taking advantage of the large sample size and geographic coverage, in contrast with the atomized sampling strategy of previous work. The results indicate that the main mtDNA haplogroups show primarily clinal geographic patterns across the Iberian geography, roughly along a North-South axis. Haplogroup HV0 (where haplogroup U is nested is more prevalent in the Franco Cantabrian region, in good agreement with previous findings that identified this area as a climate refuge during the Last Glacial Maximum (LGM, prior to a subsequent demographic re-expansion towards Central Europe and the Mediterranean. Typical sub-Saharan and North African lineages are slightly more prevalent in South Iberia, although at low frequencies; this pattern has been shaped mainly by the transatlantic slave trade and the Arab invasion of the Iberian Peninsula. The results also indicate that summary statistics that aim to measure molecular variation, or AMOVA, have limited sensitivity to detect population substructure, in contrast to patterns revealed by phylogeographic analysis. Overall, the results suggest that mtDNA variation in Iberia is substantially stratified. These patterns might be relevant in biomedical studies given that stratification is a common cause of false positives in case-control mtDNA association studies, and should be also considered when weighting the DNA evidence in forensic casework, which is strongly dependent on haplotype

Meta-Analysis of Mitochondrial DNA Variation in the Iberian Peninsula.

Science.gov (United States)

Barral-Arca, Ruth; Pischedda, Sara; Gómez-Carballa, Alberto; Pastoriza, Ana; Mosquera-Miguel, Ana; López-Soto, Manuel; Martinón-Torres, Federico; Álvarez-Iglesias, Vanesa; Salas, Antonio

2016-01-01

The Iberian Peninsula has been the focus of attention of numerous studies dealing with mitochondrial DNA (mtDNA) variation, most of them targeting the control region segment. In the present study we sequenced the control region of 3,024 Spanish individuals from areas where available data were still limited. We also compiled mtDNA haplotypes from the literature involving 4,588 sequences and 28 population groups or small regions. We meta-analyzed all these data in order to shed further light on patterns of geographic variation, taking advantage of the large sample size and geographic coverage, in contrast with the atomized sampling strategy of previous work. The results indicate that the main mtDNA haplogroups show primarily clinal geographic patterns across the Iberian geography, roughly along a North-South axis. Haplogroup HV0 (where haplogroup U is nested) is more prevalent in the Franco Cantabrian region, in good agreement with previous findings that identified this area as a climate refuge during the Last Glacial Maximum (LGM), prior to a subsequent demographic re-expansion towards Central Europe and the Mediterranean. Typical sub-Saharan and North African lineages are slightly more prevalent in South Iberia, although at low frequencies; this pattern has been shaped mainly by the transatlantic slave trade and the Arab invasion of the Iberian Peninsula. The results also indicate that summary statistics that aim to measure molecular variation, or AMOVA, have limited sensitivity to detect population substructure, in contrast to patterns revealed by phylogeographic analysis. Overall, the results suggest that mtDNA variation in Iberia is substantially stratified. These patterns might be relevant in biomedical studies given that stratification is a common cause of false positives in case-control mtDNA association studies, and should be also considered when weighting the DNA evidence in forensic casework, which is strongly dependent on haplotype frequencies.

Seasonal variation of photosynthetic model parameters and leaf area index from global Fluxnet eddy covariance data

Science.gov (United States)

Groenendijk, M.; Dolman, A. J.; Ammann, C.; Arneth, A.; Cescatti, A.; Dragoni, D.; Gash, J. H. C.; Gianelle, D.; Gioli, B.; Kiely, G.; Knohl, A.; Law, B. E.; Lund, M.; Marcolla, B.; van der Molen, M. K.; Montagnani, L.; Moors, E.; Richardson, A. D.; Roupsard, O.; Verbeeck, H.; Wohlfahrt, G.

2011-12-01

Global vegetation models require the photosynthetic parameters, maximum carboxylation capacity (Vcm), and quantum yield (α) to parameterize their plant functional types (PFTs). The purpose of this work is to determine how much the scaling of the parameters from leaf to ecosystem level through a seasonally varying leaf area index (LAI) explains the parameter variation within and between PFTs. Using Fluxnet data, we simulate a seasonally variable LAIF for a large range of sites, comparable to the LAIM derived from MODIS. There are discrepancies when LAIF reach zero levels and LAIM still provides a small positive value. We find that temperature is the most common constraint for LAIF in 55% of the simulations, while global radiation and vapor pressure deficit are the key constraints for 18% and 27% of the simulations, respectively, while large differences in this forcing still exist when looking at specific PFTs. Despite these differences, the annual photosynthesis simulations are comparable when using LAIF or LAIM (r2 = 0.89). We investigated further the seasonal variation of ecosystem-scale parameters derived with LAIF. Vcm has the largest seasonal variation. This holds for all vegetation types and climates. The parameter α is less variable. By including ecosystem-scale parameter seasonality we can explain a considerable part of the ecosystem-scale parameter variation between PFTs. The remaining unexplained leaf-scale PFT variation still needs further work, including elucidating the precise role of leaf and soil level nitrogen.

The character and mechanism of glacial variation in the peripheral Tibetan Plateau

Science.gov (United States)

Yi, S.; Wang, Q.; Sun, W.

2016-12-01

Global warming has accelerated glacier retreat in the peripheral Tibetan Plateau. Our study demonstrates consistent glacier variation in time series constructed by laser altimetry and space gravimetry in these regions. It largely enhances reliability of glacier changes and narrows down significant inconsistent in previous studies. The glacial melt is roughly weakening from southeast to northwest: from Nyenchen Tanglha to Himalaya then to Pamir even a positive gain in the Western Kunlun. A sharp melt of glacier on Nyenchen Tanglha is primarily caused by high temperature and rapid rise rather than decreasing in annual precipitation as previously thought. Glaciers on Hindu Kush, Karakoram and Western Kun even Pamir are less affect by slow rise of local temperature.

Standard molar enthalpies of formation of three methyl-pyrazole derivatives

International Nuclear Information System (INIS)

Ribeiro da Silva, Manuel A.V.; Cabral, Joana I.T.A.

2012-01-01

Highlights: ► Combustion calorimetry was used to determine Δ f H m ∘ (cr) of methyl-pyrazole derivatives. ► Vapour pressures were determined by the Knudsen mass-loss effusion technique. ► Gas-phase Δ f H m ∘ of the studied compounds have been derived. - Abstract: The standard (p ° = 0.1 MPa) molar enthalpies of formation of the crystalline 3-methyl-1-pyrazolecarboxamide; 3-methyl-3-pyrazoline-5-one; and 4-methyl-2-pyrazoline-5-one were derived from the standard massic energies of combustion, in oxygen, to yield CO 2 (g), H 2 O (l) and N 2 (g), at T = 298.15 K, measured by static bomb combustion calorimetry. The standard molar enthalpies of sublimation were calculated from the variation of the vapour pressures of each compound with temperature, measured by the Knudsen effusion technique. These two thermodynamic parameters yielded the standard molar enthalpies of formation of the pyrazole derivatives, in the gaseous phase, at T = 298.15 K. The derived standard molar enthalpies of formation, in gaseous state, are analyzed in terms of enthalpic increments and interpreted in terms of molecular structure.

Interannual variations in snowpack in the Crown of the Continent Ecosystem

Science.gov (United States)

Selkowitz, D.J.; Fagre, D.B.; Reardon, B.A.

2002-01-01

Ecosystem changes such as glacier recession and alpine treeline advance have been documented over the previous 150 years in the Rocky Mountains of northern Montana and southern British Columbia and Alberta, a region known as the Crown of the Continent Ecosystem (CCE). Such changes are controlled, at least partially, by variations in snowpack. The CCE consists primarily of public lands, the majority of which is undeveloped or wilderness. Consequently, this region is well suited for an examination of long-term snowpack variation and associated ecosystem change. Data from nine SNOTEL sites provide an indication of the daily accumulation and ablation of snowpack over the period 1977-2001, as well as the relationship between precipitation, temperature and snowpack. 1 April data from 21 snow courses indicated the extent of regional snowpack variation and trends over the period 1950-2001, and 1 May data from three snow courses in Glacier National Park allow this record to be extended back to 1922. SNOTEL data suggest CCE snowpacks are larger and more persistent than in most regions of the western USA, and that water year precipitation is the primary control on 1 April snow water equivalent (SWE). Snow course data indicate that variations in both 1 April and 1 May mean SWE are closely tied to the Pacific decadal oscillation, an El Nino-southern oscillation-like interdecadal pattern of Pacific Ocean climate variability. Despite relatively stable snowpacks and summer temperatures since 1922, the glaciers in Glacier National Park have receded steadily during this period, implying a significant climatic shift between their Little Ice Age glacial maxima (ca 1860) and 1922. Published in 2002 by John Wiley and Sons, Ltd.

Evaluation of antituberculosis activity and DFT study on dipyrromethane-derived hydrazone derivatives

Science.gov (United States)

Rawat, Poonam; Singh, R. N.; Niranjan, Priydarshni; Ranjan, Alok; Holguín, Norma Rosario Flores

2017-12-01

This paper evaluates the anti-tubercular activity of dipyrromethane-derived hydrazones derivatives (3a-d) against strain of Mycobacterium tuberculosis H37Rv. The newly synthesized compounds have been obtained in good yield based on the condensation of aromatic aldehyde derivatives with pyrrole hydrazone in presence of catalyst and well characterized with spectroscopic methods (1H, 13C NMR, Mass spectrometry) and elemental analysis. The singlet observed in the experimental 1H and 13C NMR spectra in the range of 5.3-5.7 ppm and 30-33.86 ppm, respectively, indicating that two pyrrole units are joined at meso position. The electronic transitions observed in the experimental spectra are n→π* and π →π* in nature. Experimental and theoretical findings corroborate well with each other. The substitution of acceptor group (-NO2) at ortho- and meta-positions of benzene ring, present at meso-position of dipyrromethane is responsible for variation in β0 values. The calculated NLO of (3a-d) are much greater than those of p-nitroaniline (PNA). The solvent induced effects on the non-linear optical properties were studied and found to enhance NLO properties of the molecules as dielectric constants of the solvents increases. On the basis of results it is anticipated that these dipyrromethanes will be useful for both antimicrobial and non-linear optical (NLO) applications. With the help of Microplate Alamar Blue assay (MABA) method all (3a-d) compounds were screened for their anti-tubercular activity and found that 3b and 3d have higher inhibitory activity against strain of M. tuberculosis H37Rv.

Genetic Variation among the White-striped Bactrocera dorsalis (Hendel) in Comparison with a Trok Nong-derived Population

International Nuclear Information System (INIS)

Boonsirichai, Kanokporn; Segsarnviriya, Suchada; Limohpasmanee, Wanitch; Kongratarpon, Titima; Thannarin, Thodsapol; Sungsinleart; Kwanpisut

2011-06-01

Full text: A white-striped strain of Bactrocera dorsalis (Hendel) had been developed for the fruit fly population control using the radiation-induced sterile insect technique (SIT). This report aimed at elucidating the inheritance of the white-striped phenotype and the genetic differences between the white-striped strain and the strain derived from Trok Nong sub district, Khlung district, Chantaburi. The white-striped phenotype appeared recessive to the wild type. Meanwhile, twelve ISSR primers yielded DNA bands with significantly different frequencies between the two populations. The analysis indicated four DNA bands which were absent from the white-striped population but apparent at frequencies 0.4 to 0.9 among the Trok Nong-derived population. Another four DNA bands were found absent from the Trok Nong-derived population but existed at frequencies 0.3 to 0.5 among the white-striped population. These data may benefit the monitoring of gene flow from the white-striped fruit flies to the natural population when released in a SIT program. Keywords: Bactrocera dorsalis (Hendel), SIT, genetic

Smearing of mass accretion rate variation by viscous processes in accretion disks in compact binary systems

Science.gov (United States)

Ghosh, A.; Chakrabarti, Sandip K.

2016-09-01

Variation of mass supply rate from the companion can be smeared out by viscous processes inside an accretion disk. Hence, by the time the flow reaches the inner edge, the variation in X-rays need not reflect the true variation of the mass supply rate at the outer edge. However, if the viscosity fluctuates around a mean value, one would expect the viscous time scale t_{{visc}} also to spread around a mean value. In high mass X-ray binaries, which are thought to be primarily wind-fed, the size of the viscous Keplerian disk is smaller and thus such a spread could be lower as compared to the low mass X-ray binaries which are primarily fed by Roche lobe overflow. If there is an increasing or decreasing trend in viscosity, the interval between enhanced emission would be modified systematically. In the absence of a detailed knowledge about the variation of mass supply rates at the outer edge, we study ideal circumstances where modulation must take place exactly in orbital time scales, such as when there is an ellipticity in the orbit. We study a few compact binaries using long term All Sky monitor (ASM) data (1.5-12 keV) of Rossi X-ray Timing Explorer (RXTE) and all sky survey data (15-50 keV) of Swift satellites by different methods to look for such smearing effects and to infer what these results can tell us about the viscous processes inside the respective disks. We employ three different methods to seek imprints of periodicity on the X-ray variation and found that in all the cases, the location of the peak in the power density spectra is consistent with the orbital frequencies. Interestingly, in high mass X-ray binaries the peaks are sharp with high rms values, consistent with a small Keplerian disk in a wind fed system. However, in low mass X-ray binaries with larger Keplerian disk component, the peaks are spreaded out with much lower rms values. X-ray reflections, or superhump phenomena which may also cause such X-ray modulations would not be affected by the size of

Generalized Euler-Lagrange Equations for Fuzzy Fractional Variational Problems under gH-Atangana-Baleanu Differentiability

Directory of Open Access Journals (Sweden)

Jianke Zhang

2018-01-01

Full Text Available We study in this paper the Atangana-Baleanu fractional derivative of fuzzy functions based on the generalized Hukuhara difference. Under the condition of gH-Atangana-Baleanu fractional differentiability, we prove the generalized necessary and sufficient optimality conditions for problems of the fuzzy fractional calculus of variations with a Lagrange function. The new kernel of gH-Atangana-Baleanu fractional derivative has no singularity and no locality, which was not precisely illustrated in the previous definitions.

Variational principles for the static electric and magnetic polarizabilities of anisotropic media with perfect electric conductor inclusions

International Nuclear Information System (INIS)

Sjoeberg, Daniel

2009-01-01

We present four variational principles for the electric and magnetic polarizabilities for a structure consisting of anisotropic media with perfect electric conductor (PEC) inclusions. From these principles, we derive monotonicity results and upper and lower bounds on the electric and magnetic polarizabilities. When computing the polarizabilities numerically, the bounds can be used as error bounds. The variational principles demonstrate important differences between electrostatics and magnetostatics when PEC bodies are present.

Biodegradation of Carbon Nanotubes, Graphene, and Their Derivatives.

Science.gov (United States)

Chen, Ming; Qin, Xiaosheng; Zeng, Guangming

2017-09-01

Carbon nanotubes (CNTs), graphene (GRA), and their derivatives are promising materials for a wide range of applications such as pollutant removal, enzyme immobilization, bioimaging, biosensors, and drug delivery and are rapidly increasing in use and increasingly mass produced. The biodegradation of carbon nanomaterials by microbes and enzymes is now of great importance for both reducing their toxicity to living organisms and removing them from the environment. Here we review recent progress in the biodegradation field from the point of view of the primary microbes and enzymes that can degrade these nanomaterials, along with experimental and molecular simulation methods for the exploration of nanomaterial degradation. Further efforts should primarily aim toward expanding the repertoire of microbes and enzymes and exploring optimal conditions for the degradation of nanomaterials. Copyright © 2016 Elsevier Ltd. All rights reserved.

Factors influencing development of management strategies for the Abou Ali River in Lebanon. I: Spatial variation and land use

OpenAIRE

Massoud, MA; El-Fadel, M; Scrimshaw, MDirector; Lester, JN

2006-01-01

Surface water bodies are progressively subject to increasing stress as a result of environmentally degrading processes primarily related to anthropogenic activities. This study assesses and examines the impact of land use and anthropogenic activities on the spatial variation in water quality of the Abou Ali River in North Lebanon. It is the first detailed study of its kind in Lebanon and adds to the existing Knowledge by shedding light on a relatively small Mediterranean river in a developing...

A novel derivation of the boundary term for the action in Lanczos-Lovelock gravity

Science.gov (United States)

Chakraborty, Sumanta; Parattu, Krishnamohan; Padmanabhan, T.

2017-09-01

We present a novel derivation of the boundary term for the action in Lanczos-Lovelock gravity, starting from the boundary contribution in the variation of the Lanczos-Lovelock action. The derivation presented here is straightforward, i.e., one starts from the Lanczos-Lovelock action principle and the action itself dictates the boundary structure and hence the boundary term one needs to add to the action to make it well-posed. It also gives the full structure of the contribution at the boundary of the complete action, enabling us to read off the degrees of freedom to be fixed at the boundary, their corresponding conjugate momenta and the total derivative contribution on the boundary. We also provide a separate derivation of the Gauss-Bonnet case.

Climate alters intraspecific variation in copepod effect traits through pond food webs.

Science.gov (United States)

Charette, Cristina; Derry, Alison M

2016-05-01

Essential fatty acids (EFAs) are primarily generated by phytoplankton in aquatic ecosystems, and can limit the growth, development, and reproduction of higher consumers. Among the most critical of the EFAs are highly unsaturated fatty acids (HUFAs), which are only produced by certain groups of phytoplankton. Changing environmental conditions can alter phytoplankton community and fatty acid composition and affect the HUFA content of higher trophic levels. Almost no research has addressed intraspecific variation in HUFAs in zooplankton, nor intraspecific relationships of HUFAs with body size and fecundity. This is despite that intraspecific variation in HUFAs can exceed interspecific variation and that intraspecific trait variation in body size and fecundity is increasingly recognized to have an important role in food web ecology (effect traits). Our study addressed the relative influences of abiotic selection and food web effects associated with climate change on intraspecific differences and interrelationships between HUFA content, body size, and fecundity of freshwater copepods. We applied structural equation modeling and regression analyses to intraspecific variation in a dominant calanoid copepod, Leptodiatomus minutus, among a series of shallow north-temperate ponds. Climate-driven diurnal temperature fluctuations favored the coexistence of diversity of phytoplankton groups with different temperature optima and nutritive quality. This resulted in unexpected positive relationships between temperature, copepod DHA content and body size. Temperature correlated positively with diatom biovolume, and mediated relationships between copepod HUFA content and body size, and between copepod body size and fecundity. The presence of brook trout further accentuated these positive effects in warm ponds, likely through nutrient cycling and stimulation of phytoplankton resources. Climate change may have previously unrecognized positive effects on freshwater copepod DHA content

A new fractional derivative and its application to explanation of polar bear hairs

OpenAIRE

Ji-Huan He; Zheng-Biao Li; Qing-li Wang

2016-01-01

A new fractional derivative is defined through the variational iteration method, and its application in explaining the excellent thermal protection of polar bear hairs is elucidated. The fractal porosity of its inner structure makes a polar bear mathematically adapted for living in a harsh Arctic region.

Variations in Upper-Level Water Vapor Transport Diagnosed from Climatological Satellite Data

Science.gov (United States)

Lerner, Jeffrey A; Jedlovee, Gary J.; Atkinson, Robert J.

1998-01-01

GOES-7 VAS measurements during the Pathfinder period (1987-88) have been analysed to reveal seasonal and interannual variations in moisture transport. Long term measurements of quality winds and humidity from satellite estimates show superior benefit in diagnosing middle and upper tropospheric large scale climate variations such as ENSO events and direct circulation systems such as the Hadley Cell. A water Vapor Transport Index (WVTI) has been developed to diagnose preferred regions of strong moisture transport and to gauge the seasonal and interannual intensities detected in the GOES viewing area. Second-order variables that may be derived from GOES winds will be also discussed on the poster.

A variational method in out-of-equilibrium physical systems.

Science.gov (United States)

Pinheiro, Mario J

2013-12-09

We propose a new variational principle for out-of-equilibrium dynamic systems that are fundamentally based on the method of Lagrange multipliers applied to the total entropy of an ensemble of particles. However, we use the fundamental equation of thermodynamics on differential forms, considering U and S as 0-forms. We obtain a set of two first order differential equations that reveal the same formal symplectic structure shared by classical mechanics, fluid mechanics and thermodynamics. From this approach, a topological torsion current emerges of the form , where Aj and ωk denote the components of the vector potential (gravitational and/or electromagnetic) and where ω denotes the angular velocity of the accelerated frame. We derive a special form of the Umov-Poynting theorem for rotating gravito-electromagnetic systems. The variational method is then applied to clarify the working mechanism of particular devices.

Variational P1 approximations of general-geometry multigroup transport problems

International Nuclear Information System (INIS)

Rulko, R.P.; Tomasevic, D.; Larsen, E.W.

1995-01-01

A variational approximation is developed for general-geometry multigroup transport problems with arbitrary anisotropic scattering. The variational principle is based on a functional that approximates a reaction rate in a subdomain of the system. In principle, approximations that result from this functional ''optimally'' determine such reaction rates. The functional contains an arbitrary parameter α and requires the approximate solutions of a forward and an adjoint transport problem. If the basis functions for the forward and adjoint solutions are chosen to be linear functions of the angular variable Ω, the functional yields the familiar multigroup P 1 equations for all values of α. However, the boundary conditions that result from the functional depend on α. In particular, for problems with vacuum boundaries, one obtains the conventional mixed boundary condition, but with an extrapolation distance that depends continuously on α. The choice α = 0 yields a generalization of boundary conditions derived earlier by Federighi and Pomraning for a more limited class of problems. The choice α = 1 yields a generalization of boundary conditions derived previously by Davis for monoenergetic problems. Other boundary conditions are obtained by choosing different values of α. The authors discuss this indeterminancy of α in conjunction with numerical experiments

Interannual variations and trends in global land surface phenology derived from enhanced vegetation index during 1982-2010

Science.gov (United States)

Zhang, Xiaoyang; Tan, Bin; Yu, Yunyue

2014-05-01

Land surface phenology is widely retrieved from satellite observations at regional and global scales, and its long-term record has been demonstrated to be a valuable tool for reconstructing past climate variations, monitoring the dynamics of terrestrial ecosystems in response to climate impacts, and predicting biological responses to future climate scenarios. This study detected global land surface phenology from the advanced very high resolution radiometer (AVHRR) and the Moderate Resolution Imaging Spectroradiometer (MODIS) data from 1982 to 2010. Based on daily enhanced vegetation index at a spatial resolution of 0.05 degrees, we simulated the seasonal vegetative trajectory for each individual pixel using piecewise logistic models, which was then used to detect the onset of greenness increase (OGI) and the length of vegetation growing season (GSL). Further, both overall interannual variations and pixel-based trends were examined across Koeppen's climate regions for the periods of 1982-1999 and 2000-2010, respectively. The results show that OGI and GSL varied considerably during 1982-2010 across the globe. Generally, the interannual variation could be more than a month in precipitation-controlled tropical and dry climates while it was mainly less than 15 days in temperature-controlled temperate, cold, and polar climates. OGI, overall, shifted early, and GSL was prolonged from 1982 to 2010 in most climate regions in North America and Asia while the consistently significant trends only occurred in cold climate and polar climate in North America. The overall trends in Europe were generally insignificant. Over South America, late OGI was consistent (particularly from 1982 to 1999) while either positive or negative GSL trends in a climate region were mostly reversed between the periods of 1982-1999 and 2000-2010. In the Northern Hemisphere of Africa, OGI trends were mostly insignificant, but prolonged GSL was evident over individual climate regions during the last 3

Dynamics of epidemic spreading model with drug-resistant variation on scale-free networks

Science.gov (United States)

Wan, Chen; Li, Tao; Zhang, Wu; Dong, Jing

2018-03-01

Considering the influence of the virus' drug-resistant variation, a novel SIVRS (susceptible-infected-variant-recovered-susceptible) epidemic spreading model with variation characteristic on scale-free networks is proposed in this paper. By using the mean-field theory, the spreading dynamics of the model is analyzed in detail. Then, the basic reproductive number R0 and equilibriums are derived. Studies show that the existence of disease-free equilibrium is determined by the basic reproductive number R0. The relationships between the basic reproductive number R0, the variation characteristic and the topology of the underlying networks are studied in detail. Furthermore, our studies prove the global stability of the disease-free equilibrium, the permanence of epidemic and the global attractivity of endemic equilibrium. Numerical simulations are performed to confirm the analytical results.

Podocytes Degrade Endocytosed Albumin Primarily in Lysosomes

Science.gov (United States)

Carson, John M.; Okamura, Kayo; Wakashin, Hidefumi; McFann, Kim; Dobrinskikh, Evgenia; Kopp, Jeffrey B.; Blaine, Judith

2014-01-01

Albuminuria is a strong, independent predictor of chronic kidney disease progression. We hypothesize that podocyte processing of albumin via the lysosome may be an important determinant of podocyte injury and loss. A human urine derived podocyte-like epithelial cell (HUPEC) line was used for in vitro experiments. Albumin uptake was quantified by Western blot after loading HUPECs with fluorescein-labeled (FITC) albumin. Co-localization of albumin with lysosomes was determined by confocal microscopy. Albumin degradation was measured by quantifying FITC-albumin abundance in HUPEC lysates by Western blot. Degradation experiments were repeated using HUPECs treated with chloroquine, a lysosome inhibitor, or MG-132, a proteasome inhibitor. Lysosome activity was measured by fluorescence recovery after photo bleaching (FRAP). Cytokine production was measured by ELISA. Cell death was determined by trypan blue staining. In vivo, staining with lysosome-associated membrane protein-1 (LAMP-1) was performed on tissue from a Denys-Drash trangenic mouse model of nephrotic syndrome. HUPECs endocytosed albumin, which co-localized with lysosomes. Choloroquine, but not MG-132, inhibited albumin degradation, indicating that degradation occurs in lysosomes. Cathepsin B activity, measured by FRAP, significantly decreased in HUPECs exposed to albumin (12.5% of activity in controls) and chloroquine (12.8%), and declined further with exposure to albumin plus chloroquine (8.2%, palbumin and chloroquine alone, and these effects were potentiated by exposure to albumin plus chloroquine. Compared to wild-type mice, glomerular staining of LAMP-1 was significantly increased in Denys-Drash mice and appeared to be most prominent in podocytes. These data suggest lysosomes are involved in the processing of endocytosed albumin in podocytes, and lysosomal dysfunction may contribute to podocyte injury and glomerulosclerosis in albuminuric diseases. Modifiers of lysosomal activity may have therapeutic

First wall fusion blanket temperature variation - slab geometry

International Nuclear Information System (INIS)

Fillo, J.A.

1978-01-01

The first wall of a fusion blanket is approximated by a slab, with the surface facing the plasma subjected to an applied heat flux, while the rear surface is convectively cooled. The relevant parameters affecting the heat transfer during the early phases of heating as well as for large times are established. Analytical solutions for the temperature variation with time and space are derived. Numerical calculations for an aluminum and stainless steel slab are performed for a wall loading of 1 MW(th)/m 2 . Both helium and water cooling are considered. (Auth.)

Resolving the Complex Genetic Basis of Phenotypic Variation and Variability of Cellular Growth.

Science.gov (United States)

Ziv, Naomi; Shuster, Bentley M; Siegal, Mark L; Gresham, David

2017-07-01

In all organisms, the majority of traits vary continuously between individuals. Explaining the genetic basis of quantitative trait variation requires comprehensively accounting for genetic and nongenetic factors as well as their interactions. The growth of microbial cells can be characterized by a lag duration, an exponential growth phase, and a stationary phase. Parameters that characterize these growth phases can vary among genotypes (phenotypic variation), environmental conditions (phenotypic plasticity), and among isogenic cells in a given environment (phenotypic variability). We used a high-throughput microscopy assay to map genetic loci determining variation in lag duration and exponential growth rate in growth rate-limiting and nonlimiting glucose concentrations, using segregants from a cross of two natural isolates of the budding yeast, Saccharomyces cerevisiae We find that some quantitative trait loci (QTL) are common between traits and environments whereas some are unique, exhibiting gene-by-environment interactions. Furthermore, whereas variation in the central tendency of growth rate or lag duration is explained by many additive loci, differences in phenotypic variability are primarily the result of genetic interactions. We used bulk segregant mapping to increase QTL resolution by performing whole-genome sequencing of complex mixtures of an advanced intercross mapping population grown in selective conditions using glucose-limited chemostats. We find that sequence variation in the high-affinity glucose transporter HXT7 contributes to variation in growth rate and lag duration. Allele replacements of the entire locus, as well as of a single polymorphic amino acid, reveal that the effect of variation in HXT7 depends on genetic, and allelic, background. Amplifications of HXT7 are frequently selected in experimental evolution in glucose-limited environments, but we find that HXT7 amplifications result in antagonistic pleiotropy that is absent in naturally

Pulmonary phenotypes associated with genetic variation in telomere-related genes.

Science.gov (United States)

Hoffman, Thijs W; van Moorsel, Coline H M; Borie, Raphael; Crestani, Bruno

2018-05-01

Genomic mutations in telomere-related genes have been recognized as a cause of familial forms of idiopathic pulmonary fibrosis (IPF). However, it has become increasingly clear that telomere syndromes and telomere shortening are associated with various types of pulmonary disease. Additionally, it was found that also single nucleotide polymorphisms (SNPs) in telomere-related genes are risk factors for the development of pulmonary disease. This review focuses on recent updates on pulmonary phenotypes associated with genetic variation in telomere-related genes. Genomic mutations in seven telomere-related genes cause pulmonary disease. Pulmonary phenotypes associated with these mutations range from many forms of pulmonary fibrosis to emphysema and pulmonary vascular disease. Telomere-related mutations account for up to 10% of sporadic IPF, 25% of familial IPF, 10% of connective-tissue disease-associated interstitial lung disease, and 1% of COPD. Mixed disease forms have also been found. Furthermore, SNPs in TERT, TERC, OBFC1, and RTEL1, as well as short telomere length, have been associated with several pulmonary diseases. Treatment of pulmonary disease caused by telomere-related gene variation is currently based on disease diagnosis and not on the underlying cause. Pulmonary phenotypes found in carriers of telomere-related gene mutations and SNPs are primarily pulmonary fibrosis, sometimes emphysema and rarely pulmonary vascular disease. Genotype-phenotype relations are weak, suggesting that environmental factors and genetic background of patients determine disease phenotypes to a large degree. A disease model is presented wherever genomic variation in telomere-related genes cause specific pulmonary disease phenotypes whenever triggered by environmental exposure, comorbidity, or unknown factors.

Torque differences due to the material variation of the orthodontic appliance: a finite element study.

Science.gov (United States)

Papageorgiou, Spyridon N; Keilig, Ludger; Vandevska-Radunovic, Vaska; Eliades, Theodore; Bourauel, Christoph

2017-12-01

Torque of the maxillary incisors is crucial to occlusal relationship and esthetics and can be influenced by many factors. The aim of this study was to assess the relative influence of the material of the orthodontic appliance (adhesive, bracket, ligature, and wire) on tooth displacements and developed stresses/strains after torque application. A three-dimensional upper right central incisor with its periodontal ligament (PDL) and alveolus was modeled. A 0.018-in. slot discovery® (Dentaurum, Ispringen, Germany) bracket with a rectangular 0.018 x 0.025-in. wire was generated. The orthodontic appliance varied in the material of its components: adhesive (composite resin or resin-modified glass ionomer cement), bracket (titanium, steel, or ceramic), wire (beta-titanium or steel), and ligature (elastomeric or steel). A total of 24 models were generated, and a palatal root torque of 5° was applied. Afterwards, crown and apex displacement, strains in the PDL, and stresses in the bracket were calculated and analyzed. The labial crown displacement and the palatal root displacement of the tooth were mainly influenced by the material of the wire (up to 150% variation), followed by the material of the bracket (up to 19% variation). The magnitude of strains developed in the PDL was primarily influenced by the material of the wire (up to 127% variation), followed by the material of the bracket (up to 30% variation) and the ligature (up to 13% variation). Finally, stresses developed at the bracket were mainly influenced by the material of the wire (up to 118% variation) and the bracket (up to 59% variation). The material properties of the orthodontic appliance and all its components should be considered during torque application. However, these in silico results need to be validated in vivo before they can be clinically extrapolated.

Temporal integration of loudness in listeners with hearing losses of primarily cochlear origin

DEFF Research Database (Denmark)

Buus, Søren; Florentine, Mary; Poulsen, Torben

1999-01-01

To investigate how hearing loss of primarily cochlear origin affects the loudness of brief tones, loudness matches between 5- and 200-ms tones were obtained as a function of level for 15 listeners with cochlear impairments and for seven age-matched controls. Three frequencies, usually 0.5, 1, and 4...... of temporal integration—defined as the level difference between equally loud short and long tones—varied nonmonotonically with level and was largest at moderate levels. No consistent effect of frequency was apparent. The impaired listeners varied widely, but most showed a clear effect of level on the amount...... of temporal integration. Overall, their results appear consistent with expectations based on knowledge of the general properties of their loudness-growth functions and the equal-loudness-ratio hypothesis, which states that the loudness ratio between equal-SPL long and brief tones is the same at all SPLs...

A new fractional derivative and its application to explanation of polar bear hairs

Directory of Open Access Journals (Sweden)

Ji-Huan He

2016-04-01

Full Text Available A new fractional derivative is defined through the variational iteration method, and its application in explaining the excellent thermal protection of polar bear hairs is elucidated. The fractal porosity of its inner structure makes a polar bear mathematically adapted for living in a harsh Arctic region.

Time variations in geomagnetic intensity

Science.gov (United States)

Valet, Jean-Pierre

2003-03-01

After many years spent by paleomagnetists studying the directional behavior of the Earth's magnetic field at all possible timescales, detailed measurements of field intensity are now needed to document the variations of the entire vector and to analyze the time evolution of the field components. A significant step has been achieved by combining intensity records derived from archeological materials and from lava flows in order to extract the global field changes over the past 12 kyr. A second significant step was due to the emergence of coherent records of relative paleointensity using the remanent magnetization of sediments to retrace the evolution of the dipole field. A third step was the juxtaposition of these signals with those derived from cosmogenic isotopes. Contemporaneous with the acquisition of records, new techniques have been developed to constrain the geomagnetic origin of the signals. Much activity has also been devoted to improving the quality of determinations of absolute paleointensity from volcanic rocks with new materials, proper selection of samples, and investigations of complex changes in magnetization during laboratory experiments. Altogether these developments brought us from a situation where the field changes were restricted to the past 40 kyr to the emergence of a coherent picture of the changes in the geomagnetic dipole moment for at least the past 1 Myr. On longer timescales the field variability and its average behavior is relatively well documented for the past 400 Myr. Section 3 gives a summary of most methods and techniques that are presently used to track the field intensity changes in the past. In each case, current limits and potential promises are discussed. The section 4 describes the field variations measured so far over various timescales covered by the archeomagnetic and the paleomagnetic records. Preference has always been given to composite records and databases in order to extract and discuss major and global geomagnetic

Predators or prey? Spatio-temporal discrimination of human-derived risk by brown bears.

Science.gov (United States)

Ordiz, Andrés; Støen, Ole-Gunnar; Delibes, Miguel; Swenson, Jon E

2011-05-01

Prey usually adjust anti-predator behavior to subtle variations in perceived risk. However, it is not clear whether adult large carnivores that are virtually free of natural predation adjust their behavior to subtle variations in human-derived risk, even when living in human-dominated landscapes. As a model, we studied resting-site selection by a large carnivore, the brown bear (Ursus arctos), under different spatial and temporal levels of human activity. We quantified horizontal and canopy cover at 440 bear beds and 439 random sites at different distances from human settlements, seasons, and times of the day. We hypothesized that beds would be more concealed than random sites and that beds would be more concealed in relation to human-derived risk. Although human densities in Scandinavia are the lowest within bear ranges in Western Europe, we found an effect of human activity; bears chose beds with higher horizontal and canopy cover during the day (0700-1900 hours), especially when resting closer to human settlements, than at night (2200-0600 hours). In summer/fall (the berry season), with more intensive and dispersed human activity, including hunting, bears rested further from human settlements during the day than in spring (pre-berry season). Additionally, day beds in the summer/fall were the most concealed. Large carnivores often avoid humans at a landscape scale, but total avoidance in human-dominated areas is not possible. Apparently, bears adjust their behavior to avoid human encounters, which resembles the way prey avoid their predators. Bears responded to fine-scale variations in human-derived risk, both on a seasonal and a daily basis.

Dispersion Measure Variation of Repeating Fast Radio Burst Sources

Energy Technology Data Exchange (ETDEWEB)

Yang, Yuan-Pei; Zhang, Bing, E-mail: yypspore@gmail.com, E-mail: zhang@physics.unlv.edu [Kavli Institute for Astronomy and Astrophysics, Peking University, Beijing 100871 (China)

2017-09-20

The repeating fast radio burst (FRB) 121102 was recently localized in a dwarf galaxy at a cosmological distance. The dispersion measure (DM) derived for each burst from FRB 121102 so far has not shown significant evolution, even though an apparent increase was recently seen with newly detected VLA bursts. It is expected that more repeating FRB sources may be detected in the future. In this work, we investigate a list of possible astrophysical processes that might cause DM variation of a particular FRB source. The processes include (1) cosmological scale effects such as Hubble expansion and large-scale structure fluctuations; (2) FRB local effects such as gas density fluctuation, expansion of a supernova remnant (SNR), a pulsar wind nebula, and an H ii region; and (3) the propagation effect due to plasma lensing. We find that the DM variations contributed by the large-scale structure are extremely small, and any observable DM variation is likely caused by the plasma local to the FRB source. In addition to mechanisms that decrease DM over time, we suggest that an FRB source in an expanding SNR around a nearly neutral ambient medium during the deceleration (Sedov–Taylor and snowplow) phases or in a growing H ii region can increase DM. Some effects (e.g., an FRB source moving in an H ii region or plasma lensing) can produce either positive or negative DM variations. Future observations of DM variations of FRB 121102 and other repeating FRB sources can provide important clues regarding the physical origin of these sources.

Dispersion Measure Variation of Repeating Fast Radio Burst Sources

International Nuclear Information System (INIS)

Yang, Yuan-Pei; Zhang, Bing

2017-01-01

The repeating fast radio burst (FRB) 121102 was recently localized in a dwarf galaxy at a cosmological distance. The dispersion measure (DM) derived for each burst from FRB 121102 so far has not shown significant evolution, even though an apparent increase was recently seen with newly detected VLA bursts. It is expected that more repeating FRB sources may be detected in the future. In this work, we investigate a list of possible astrophysical processes that might cause DM variation of a particular FRB source. The processes include (1) cosmological scale effects such as Hubble expansion and large-scale structure fluctuations; (2) FRB local effects such as gas density fluctuation, expansion of a supernova remnant (SNR), a pulsar wind nebula, and an H ii region; and (3) the propagation effect due to plasma lensing. We find that the DM variations contributed by the large-scale structure are extremely small, and any observable DM variation is likely caused by the plasma local to the FRB source. In addition to mechanisms that decrease DM over time, we suggest that an FRB source in an expanding SNR around a nearly neutral ambient medium during the deceleration (Sedov–Taylor and snowplow) phases or in a growing H ii region can increase DM. Some effects (e.g., an FRB source moving in an H ii region or plasma lensing) can produce either positive or negative DM variations. Future observations of DM variations of FRB 121102 and other repeating FRB sources can provide important clues regarding the physical origin of these sources.

Transposable element distribution, abundance and role in genome size variation in the genus Oryza.

Science.gov (United States)

Zuccolo, Andrea; Sebastian, Aswathy; Talag, Jayson; Yu, Yeisoo; Kim, HyeRan; Collura, Kristi; Kudrna, Dave; Wing, Rod A

2007-08-29

The genus Oryza is composed of 10 distinct genome types, 6 diploid and 4 polyploid, and includes the world's most important food crop - rice (Oryza sativa [AA]). Genome size variation in the Oryza is more than 3-fold and ranges from 357 Mbp in Oryza glaberrima [AA] to 1283 Mbp in the polyploid Oryza ridleyi [HHJJ]. Because repetitive elements are known to play a significant role in genome size variation, we constructed random sheared small insert genomic libraries from 12 representative Oryza species and conducted a comprehensive study of the repetitive element composition, distribution and phylogeny in this genus. Particular attention was paid to the role played by the most important classes of transposable elements (Long Terminal Repeats Retrotransposons, Long interspersed Nuclear Elements, helitrons, DNA transposable elements) in shaping these genomes and in their contributing to genome size variation. We identified the elements primarily responsible for the most strikingly genome size variation in Oryza. We demonstrated how Long Terminal Repeat retrotransposons belonging to the same families have proliferated to very different extents in various species. We also showed that the pool of Long Terminal Repeat Retrotransposons is substantially conserved and ubiquitous throughout the Oryza and so its origin is ancient and its existence predates the speciation events that originated the genus. Finally we described the peculiar behavior of repeats in the species Oryza coarctata [HHKK] whose placement in the Oryza genus is controversial. Long Terminal Repeat retrotransposons are the major component of the Oryza genomes analyzed and, along with polyploidization, are the most important contributors to the genome size variation across the Oryza genus. Two families of Ty3-gypsy elements (RIRE2 and Atlantys) account for a significant portion of the genome size variations present in the Oryza genus.

A multi-year comparison of IPCI scores for prairie pothole wetlands: implications of temporal and spatial variation

Science.gov (United States)

Euliss, Ned H.; Mushet, David M.

2011-01-01

In the prairie pothole region of North America, development of Indices of Biotic Integrity (IBIs) to detect anthropogenic impacts on wetlands has been hampered by naturally dynamic inter-annual climate fluctuations. Of multiple efforts to develop IBIs for prairie pothole wetlands, only one, the Index of Plant Community Integrity (IPCI), has reported success. We evaluated the IPCI and its ability to distinguish between natural and anthropogenic variation using plant community data collected from 16 wetlands over a 4-year-period. We found that under constant anthropogenic influence, IPCI metric scores and condition ratings varied annually in response to environmental variation driven primarily by natural climate variation. Artificially forcing wetlands that occur along continuous hydrologic gradients into a limited number of discrete classes (e.g., temporary, seasonal, and semi-permanent) further confounded the utility of IPCI metrics. Because IPCI scores vary significantly due to natural climate dynamics as well as human impacts, methodology must be developed that adequately partitions natural and anthropogenically induced variation along continuous hydrologic gradients. Until such methodology is developed, the use of the IPCI to evaluate prairie pothole wetlands creates potential for misdirected corrective or regulatory actions, impairment of natural wetland functional processes, and erosion of public confidence in the wetland sciences.

Validation and Variation of Upper Layer Thickness in South China Sea from Satellite Altimeter Data

Directory of Open Access Journals (Sweden)

Nan-Jung Kuo

2008-06-01

Full Text Available Satellite altimeter data from 1993 to 2005 has been used to analyze the seasonal variation and the interannual variability of upper layer thickness (ULT in the South China Sea (SCS. Base on in-situ measurements, the ULT is defined as the thickness from the sea surface to the depth of 16°C isotherm which is used to validate the result derived from satellite altimeter data. In comparison with altimeter and in-situ derived ULTs yields a correlation coefficient of 0.92 with a slope of 0.95 and an intercept of 6 m. The basin averaged ULT derived from altimeter is 160 m in winter and 171 m in summer which is similar to the in-situ measurements of 159 m in winter and 175 m in summer. Both results also show similar spatial patterns. It suggests that the sea surface height data derived from satellite sensors are usable for study the variation of ULT in the semi-closed SCS. Furthermore, we also use satellite derived ULT to detect the development of eddy. Interannual variability of two meso-scale cyclonic eddies and one anticyclonic eddy are strongly influenced by El Niño events. In most cases, there are highly positive correlations between ULT and sea surface temperature except the periods of El Niño. During the onset of El Niño event, ULT is deeper when sea surface temperature is lower.

Biologic Rhythms Derived from Siberian Mammoths Hairs

Energy Technology Data Exchange (ETDEWEB)

M Spilde; A Lanzirotti; C Qualls; G Phillips; A Ali; L Agenbroad; O Appenzeller

2011-12-31

Hair is preserved for millennia in permafrost; it enshrines a record of biologic rhythms and offers a glimpse at chronobiology as it was in extinct animals. Here we compare biologic rhythms gleaned from mammoth's hairs with those of modern human hair. Four mammoths' hairs came from varying locations in Siberia 4600 km, four time zones, apart ranging in age between 18,000 and 20,000 years before present. We used two contemporaneous human hairs for comparison. Power spectra derived from hydrogen isotope ratios along the length of the hairs gave insight into biologic rhythms, which were different in the mammoths depending on location and differed from humans. Hair growth for mammoths was {approx}31 cms/year and {approx}16 cms/year for humans. Recurrent annual rhythms of slow and fast growth varying from 3.4 weeks/cycles to 8.7 weeks/cycles for slow periods and 1.2 weeks/cycles to 2.2 weeks/cycles for fast periods were identified in mammoth's hairs. The mineral content of mammoth's hairs was measured by electron microprobe analysis (k-ratios), which showed no differences in sulfur amongst the mammoth hairs but significantly more iron then in human hair. The fractal nature of the data derived from the hairs became evident in Mandelbrot sets derived from hydrogen isotope ratios, mineral content and geographic location. Confocal microscopy and scanning electron microscopy showed varied degrees of preservation of the cuticle largely independent of age but not location of the specimens. X-ray fluorescence microprobe and fluorescence computed micro-tomography analyses allowed evaluation of metal distribution and visualization of hollow tubes in the mammoth's hairs. Seasonal variations in iron and copper content combined with spectral analyses gave insights into variation in food intake of the animals. Biologic rhythms gleaned from power spectral plots obtained by modern methods revealed life style and behavior of extinct mega-fauna.

Biologic rhythms derived from Siberian mammoths' hairs.

Directory of Open Access Journals (Sweden)

Mike Spilde

Full Text Available Hair is preserved for millennia in permafrost; it enshrines a record of biologic rhythms and offers a glimpse at chronobiology as it was in extinct animals. Here we compare biologic rhythms gleaned from mammoth's hairs with those of modern human hair. Four mammoths' hairs came from varying locations in Siberia 4600 km, four time zones, apart ranging in age between 18,000 and 20,000 years before present. We used two contemporaneous human hairs for comparison. Power spectra derived from hydrogen isotope ratios along the length of the hairs gave insight into biologic rhythms, which were different in the mammoths depending on location and differed from humans. Hair growth for mammoths was ∼31 cms/year and ∼16 cms/year for humans. Recurrent annual rhythms of slow and fast growth varying from 3.4 weeks/cycles to 8.7 weeks/cycles for slow periods and 1.2 weeks/cycles to 2.2 weeks/cycles for fast periods were identified in mammoth's hairs. The mineral content of mammoth's hairs was measured by electron microprobe analysis (k-ratios, which showed no differences in sulfur amongst the mammoth hairs but significantly more iron then in human hair. The fractal nature of the data derived from the hairs became evident in Mandelbrot sets derived from hydrogen isotope ratios, mineral content and geographic location. Confocal microscopy and scanning electron microscopy showed varied degrees of preservation of the cuticle largely independent of age but not location of the specimens. X-ray fluorescence microprobe and fluorescence computed micro-tomography analyses allowed evaluation of metal distribution and visualization of hollow tubes in the mammoth's hairs. Seasonal variations in iron and copper content combined with spectral analyses gave insights into variation in food intake of the animals. Biologic rhythms gleaned from power spectral plots obtained by modern methods revealed life style and behavior of extinct mega-fauna.

Theileria parva antigens recognized by CD8+ T cells show varying degrees of diversity in buffalo-derived infected cell lines.

Science.gov (United States)

Sitt, Tatjana; Pelle, Roger; Chepkwony, Maurine; Morrison, W Ivan; Toye, Philip

2018-05-06

The extent of sequence diversity among the genes encoding 10 antigens (Tp1-10) known to be recognized by CD8+ T lymphocytes from cattle immune to Theileria parva was analysed. The sequences were derived from parasites in 23 buffalo-derived cell lines, three cattle-derived isolates and one cloned cell line obtained from a buffalo-derived stabilate. The results revealed substantial variation among the antigens through sequence diversity. The greatest nucleotide and amino acid diversity were observed in Tp1, Tp2 and Tp9. Tp5 and Tp7 showed the least amount of allelic diversity, and Tp5, Tp6 and Tp7 had the lowest levels of protein diversity. Tp6 was the most conserved protein; only a single non-synonymous substitution was found in all obtained sequences. The ratio of non-synonymous: synonymous substitutions varied from 0.84 (Tp1) to 0.04 (Tp6). Apart from Tp2 and Tp9, we observed no variation in the other defined CD8+ T cell epitopes (Tp4, 5, 7 and 8), indicating that epitope variation is not a universal feature of T. parva antigens. In addition to providing markers that can be used to examine the diversity in T. parva populations, the results highlight the potential for using conserved antigens to develop vaccines that provide broad protection against T. parva.

Variational approach to gravity field theories from Newton to Einstein and beyond

CERN Document Server

Vecchiato, Alberto

2017-01-01

This book offers a detailed and stimulating account of the Lagrangian, or variational, approach to general relativity and beyond. The approach more usually adopted when describing general relativity is to introduce the required concepts of differential geometry and derive the field and geodesic equations from purely geometrical properties. Demonstration of the physical meaning then requires the weak field approximation of these equations to recover their Newtonian counterparts. The potential downside of this approach is that it tends to suit the mathematical mind and requires the physicist to study and work in a completely unfamiliar environment. In contrast, the approach to general relativity described in this book will be especially suited to physics students. After an introduction to field theories and the variational approach, individual sections focus on the variational approach in relation to special relativity, general relativity, and alternative theories of gravity. Throughout the text, solved exercis...

PENENTUAN HARGA OPSI BELI TIPE ASIA DENGAN METODE MONTE CARLO-CONTROL VARIATE

Directory of Open Access Journals (Sweden)

NI NYOMAN AYU ARTANADI

2017-01-01

Full Text Available Option is a contract between the writer and the holder which entitles the holder to buy or sell an underlying asset at the maturity date for a specified price known as an exercise price. Asian option is a type of financial derivatives which the payoff taking the average value over the time series of the asset price. The aim of the study is to present the Monte Carlo-Control Variate as an extension of Standard Monte Carlo applied on the calculation of the Asian option price. Standard Monte Carlo simulations 10.000.000 generate standard error 0.06 and the option price convergent at Rp.160.00 while Monte Carlo-Control Variate simulations 100.000 generate standard error 0.01 and the option price convergent at Rp.152.00. This shows the Monte Carlo-Control Variate achieve faster option price toward convergent of the Monte Carlo Standar.

Calculus of variations

CERN Document Server

Elsgolc, L E; Stark, M

1961-01-01

Calculus of Variations aims to provide an understanding of the basic notions and standard methods of the calculus of variations, including the direct methods of solution of the variational problems. The wide variety of applications of variational methods to different fields of mechanics and technology has made it essential for engineers to learn the fundamentals of the calculus of variations. The book begins with a discussion of the method of variation in problems with fixed boundaries. Subsequent chapters cover variational problems with movable boundaries and some other problems; sufficiency

Methods for determining the wall thickness variation of tubular heaters used in thermalhydraulic studies

International Nuclear Information System (INIS)

Cubizolles, G.; Garnier, J.; Groeneveld, D.; Tanase, A.

2009-01-01

Fuel bundle simulators used in thermalhydraulic studies typically consist of bundles of directly heated tubes. It is usually assumed that the heater tubes have a uniform circumferential heat flux distribution. In practice, this heat flux distribution is never exactly uniform because of wall thickness variations and bore eccentricity. Ignoring the non-uniformity in wall thickness can lead to under-estimating the local heat transfer coefficients. During nucleate boiling tests in a 5x5 PWR-type bundle subassembly at CEA-Grenoble, a sinusoidal temperature distribution was observed around the inside circumference of the heater rods. These heater rods were equipped with high-accuracy sliding thermocouple probes that permit the detailed measurement of the internal wall temperature distribution, both axially and circumferentially. The sinusoidal temperature distribution strongly suggests a variation in wall thickness. A methodology was subsequently derived to determine the circumferential wall thickness variation. The method is based on the principle that for directly heated fuel-element simulators, the nucleate boiling wall superheat at high pressures is nearly uniform around the heater rod circumference. The results show wall thickness variations of up to ±4% which was confirmed by subsequent ultrasonic wall-thickness measurements performed after bundle disassembly. Non-uniformities in circumferential temperature distributions were also observed during parallel thermalhydraulic tests at the University of Ottawa (UofO) on an electrically heated tube cooled internally by R-134a and equipped with fixed thermocouples on the outside. From the measured wall temperatures and knowledge of the inside heat transfer coefficient or wall temperature distribution, the variations in wall thickness and surface heat flux to the coolant were evaluated by solving conduction equations using three separate sets of data (1) single phase heat transfer data, (2) nucleate boiling data, and (3

Spatial Variation of Temperature and Precipitation in Bhutan and Links to Vegetation and Land Cover

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Ugyen Dorji

2016-02-01

Full Text Available Bhutan, located in the Himalayas in the South Asian monsoon region, has extremely high variation in elevation, climatic conditions, and land cover despite its small geographical area, as well as great biodiversity. This paper provides the first comprehensive description of climatic conditions in Bhutan. It assesses the spatial variation of temperature and precipitation across the country and evaluates the causes for this variation based on daily data from 70 meteorological stations that have been recording data for time spans ranging from 3 to 21 years. Temperature and precipitation show contrasting spatial variation, with temperature primarily affected by elevation and precipitation by latitude. Models were developed using mixed linear regression models to predict seasonal and annual mean temperature and precipitation based on geographical location. Using linear regression we found that temperatures changed by about 0.5°C for every 100 m of change in elevation, with lapse rates being highest in February, March, and November and lowest from June to August. The lapse rate was highest for minimum temperatures and lowest for maximum temperatures, with the greatest difference during winter. The spatial distribution of precipitation was mainly controlled by latitude, having a quadratic relationship, with the highest rates in the southern foothills of the Himalayan range and the lowest at midlatitudes. The land cover is affected by topography and local climate, with variations in temperature being a main deciding factor for vegetation types; most human settlements and associated land uses are concentrated at lower elevations.

Cone Beam CT Imaging Analysis of Interfractional Variations in Bladder Volume and Position During Radiotherapy for Bladder Cancer

International Nuclear Information System (INIS)

Yee, Don; Parliament, Matthew; Rathee, Satyapal; Ghosh, Sunita; Ko, Lawrence; Murray, Brad

2010-01-01

Purpose: To quantify daily bladder size and position variations during bladder cancer radiotherapy. Methods and Materials: Ten bladder cancer patients underwent daily cone beam CT (CBCT) imaging of the bladder during radiotherapy. Bladder and planning target volumes (bladder/PTV) from CBCT and planning CT scans were compared with respect to bladder center-of-mass shifts in the x (lateral), y (anterior-posterior), and z (superior-inferior) coordinates, bladder/PTV size, bladder/PTV margin positions, overlapping areas, and mutually exclusive regions. Results: A total of 262 CBCT images were obtained from 10 bladder cancer patients. Bladder center of mass shifted most in the y coordinate (mean, -0.32 cm). The anterior bladder wall shifted the most (mean, -0.58 cm). Mean ratios of CBCT-derived bladder and PTV volumes to planning CT-derived counterparts were 0.83 and 0.88. The mean CBCT-derived bladder volume (± standard deviation [SD]) outside the planning CT counterpart was 29.24 cm 3 (SD, 29.71 cm 3 ). The mean planning CT-derived bladder volume outside the CBCT counterpart was 47.74 cm 3 (SD, 21.64 cm 3 ). The mean CBCT PTV outside the planning CT-derived PTV was 47.35 cm 3 (SD, 36.51 cm 3 ). The mean planning CT-derived PTV outside the CBCT-derived PTV was 93.16 cm 3 (SD, 50.21). The mean CBCT-derived bladder volume outside the planning PTV was 2.41 cm 3 (SD, 3.97 cm 3 ). CBCT bladder/ PTV volumes significantly differed from planning CT counterparts (p = 0.047). Conclusions: Significant variations in bladder and PTV volume and position occurred in patients in this trial.

An "island" in the stratosphere - on the enhanced annual variation of water vapour in the middle and upper stratosphere in the southern tropics and subtropics

Science.gov (United States)

Lossow, Stefan; Garny, Hella; Jöckel, Patrick

2017-09-01

The amplitude of the annual variation in water vapour exhibits a distinct isolated maximum in the middle and upper stratosphere in the southern tropics and subtropics, peaking typically around 15° S in latitude and close to 3 hPa (˜ 40.5 km) in altitude. This enhanced annual variation is primarily related to the Brewer-Dobson circulation and hence also visible in other trace gases. So far this feature has not gained much attention in the literature and the present work aims to add more prominence. Using Envisat/MIPAS (Environmental Satellite/Michelson Interferometer for Passive Atmospheric Sounding) observations and ECHAM/MESSy (European Centre for Medium-Range Weather Forecasts Hamburg/Modular Earth Submodel System) Atmospheric Chemistry (EMAC) simulations we provide a dedicated illustration and a full account of the reasons for this enhanced annual variation.

Derivatives of buckling loads and vibration frequencies with respect to stiffness and initial strain parameters

Science.gov (United States)

Haftka, Raphael T.; Cohen, Gerald A.; Mroz, Zenon

1990-01-01

A uniform variational approach to sensitivity analysis of vibration frequencies and bifurcation loads of nonlinear structures is developed. Two methods of calculating the sensitivities of bifurcation buckling loads and vibration frequencies of nonlinear structures, with respect to stiffness and initial strain parameters, are presented. A direct method requires calculation of derivatives of the prebuckling state with respect to these parameters. An adjoint method bypasses the need for these derivatives by using instead the strain field associated with the second-order postbuckling state. An operator notation is used and the derivation is based on the principle of virtual work. The derivative computations are easily implemented in structural analysis programs. This is demonstrated by examples using a general purpose, finite element program and a shell-of-revolution program.

Immunohistochemical localization of host and donor-derived cells in the regenerating thymus of radiation bone marrow chimeras

International Nuclear Information System (INIS)

Ceredig, R.; Schreyer, M.

1984-01-01

The anatomical distribution of CBA (Thy-1.2) host and AKR (Thy-1.1) donor-derived cells in the regenerating thymus of AKR → CBA radiation bone marrow chimeras was investigated. Cryostat sections of chimeric thymuses were incubated with biotin-conjugated monoclonal anti-Thy-1 antibodies specific for host and donor-derived cells and the distribution of the corresponding Thy-1 antigen revealed by the immunoperoxidase staining technique. The thymus was initially repopulated by Thy-1.2 + host-derived cells, but by 28 days following bone marrow reconstitution the few remaining host cells were found mostly in the thymus medulla. However, occasional Thy-1.2 + cells were still present in extramedullary, primarily cortical, sites. Donor-derived (Thy-1.1 + ) cells were first seen in the 11-day chimeric thymus as single cells frequently closely associated with blood vessels in medullary areas. By 17 days, the cortex contained many Thy-1.1 + cells, although occasional single positive cells were still present in the medulla. Changes in the anatomical distribution of host and donor-derived cells in the regenerating chimeric thymus appeared to correlate with changes in their Thy-1 fluorescence profile as determined by flow microfluorometry. (Auth.)

Preparation of new boron compounds with potential for application in 10B NCT: Derivatives of monocarbon carboranes

International Nuclear Information System (INIS)

Morris, J.H.; Khan, S.A.; Mair, F.; Peters, G.

1992-01-01

In order to extend the range and versatility of boron clusters appropriate to NCT the authors have studied routes to derivatives of the anions 1-carba-closo-dodecahydrododecaborate-1, [CB 11 H 12 ] - , (1), and its synthetic precursor, 7-carba-nido-tridecahydroundecaborate-1, [CB 10 H 13 ] - , (2). Substitution chemistry of closo-[CB 11 H 12 ] - and its derivatives had been examined previously primarily with respect to substituents at the C-atom. The different isomeric sites of boron substitution, which have been much less studied, offer potential scope for subtle modification of properties of the substituted species. They have sought to prepare thiol substituted derivatives analogous to the widely studied species [B 12 H 11 SH] 2- . The preliminary experiments to introduce the thiol substituent by routes analogous to those for the preparation of [B 12 H 11 SH] 2- or 1- and 2-[B 10 H 9 SH] 2- were unsuccessful. Therefore they considered routes involving prior substitution of either the precursor nido-[CB 10 H 13 ] - and its derivatives, or the monoboron species used for boron insertion

Variational and quasi-variational inequalities in mechanics

CERN Document Server

Kravchuk, Alexander S

2007-01-01

The essential aim of the present book is to consider a wide set of problems arising in the mathematical modelling of mechanical systems under unilateral constraints. In these investigations elastic and non-elastic deformations, friction and adhesion phenomena are taken into account. All the necessary mathematical tools are given: local boundary value problem formulations, construction of variational equations and inequalities, and the transition to minimization problems, existence and uniqueness theorems, and variational transformations (Friedrichs and Young-Fenchel-Moreau) to dual and saddle-point search problems. Important new results concern contact problems with friction. The Coulomb friction law and some others are considered, in which relative sliding velocities appear. The corresponding quasi-variational inequality is constructed, as well as the appropriate iterative method for its solution. Outlines of the variational approach to non-stationary and dissipative systems and to the construction of the go...

Small Tails Tell Tall Tales--Intra-Individual Variation in the Stable Isotope Values of Fish Fin.

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Brian Hayden

Full Text Available Fish fin is a widely used, non-lethal sample material in studies using stable isotopes to assess the ecology of fishes. However, fish fin is composed of two distinct tissues (ray and membrane which may have different stable isotope values and are not homogeneously distributed within a fin. As such, estimates of the stable isotope values of a fish may vary according to the section of fin sampled.To assess the magnitude of this variation, we analysed carbon (δ13C, nitrogen (δ15N, hydrogen (δ2H and oxygen (δ18O stable isotopes of caudal fin from juvenile, riverine stages of Atlantic salmon (Salmo salar and brown trout (Salmo trutta. Individual fins were sub-sectioned into tip, mid and base, of which a further subset were divided into ray and membrane.Isotope variation between fin sections, evident in all four elements, was primarily related to differences between ray and membrane. Base sections were13C depleted relative to tip (~1‰ with equivalent variation evident between ray and membrane. A similar trend was evident in δ2H, though the degree of variation was far greater (~10‰. Base and ray sections were 18O enriched (~2‰ relative to tip and membrane, respectively. Ray and membrane sections displayed longitudinal variation in 15N mirroring that of composite fin (~1‰, indicating that variation in15N values was likely related to ontogenetic variation.To account for the effects of intra-fin variability in stable isotope analyses we suggest that researchers sampling fish fin, in increasing priority, 1 also analyse muscle (or liver tissue from a subsample of fish to calibrate their data, or 2 standardize sampling by selecting tissue only from the extreme tip of a fin, or 3 homogenize fins prior to analysis.

Constrained Total Generalized p-Variation Minimization for Few-View X-Ray Computed Tomography Image Reconstruction.

Science.gov (United States)

Zhang, Hanming; Wang, Linyuan; Yan, Bin; Li, Lei; Cai, Ailong; Hu, Guoen

2016-01-01

Total generalized variation (TGV)-based computed tomography (CT) image reconstruction, which utilizes high-order image derivatives, is superior to total variation-based methods in terms of the preservation of edge information and the suppression of unfavorable staircase effects. However, conventional TGV regularization employs l1-based form, which is not the most direct method for maximizing sparsity prior. In this study, we propose a total generalized p-variation (TGpV) regularization model to improve the sparsity exploitation of TGV and offer efficient solutions to few-view CT image reconstruction problems. To solve the nonconvex optimization problem of the TGpV minimization model, we then present an efficient iterative algorithm based on the alternating minimization of augmented Lagrangian function. All of the resulting subproblems decoupled by variable splitting admit explicit solutions by applying alternating minimization method and generalized p-shrinkage mapping. In addition, approximate solutions that can be easily performed and quickly calculated through fast Fourier transform are derived using the proximal point method to reduce the cost of inner subproblems. The accuracy and efficiency of the simulated and real data are qualitatively and quantitatively evaluated to validate the efficiency and feasibility of the proposed method. Overall, the proposed method exhibits reasonable performance and outperforms the original TGV-based method when applied to few-view problems.

Seasonal variation of maternally derived respiratory syncytial virus antibodies and association with infant hospitalizations for respiratory syncytial virus

DEFF Research Database (Denmark)

Stensballe, Lone Graff; Ravn, Henrik; Kristensen, Kim

2009-01-01

This study used 459 prospectively sampled cord blood samples to examine the association between maternally derived respiratory syncytial virus (RSV)-neutralizing antibodies and the RSV hospitalization season in Denmark. We found a clear temporal association and suggest that RSV-neutralizing antib......This study used 459 prospectively sampled cord blood samples to examine the association between maternally derived respiratory syncytial virus (RSV)-neutralizing antibodies and the RSV hospitalization season in Denmark. We found a clear temporal association and suggest that RSV......-neutralizing antibody level plays a role in the RSV seasonal pattern....

Calculus of variations

CERN Document Server

Elsgolc, Lev D

2007-01-01

This concise text offers both professionals and students an introduction to the fundamentals and standard methods of the calculus of variations. In addition to surveys of problems with fixed and movable boundaries, it explores highly practical direct methods for the solution of variational problems.Topics include the method of variation in problems with fixed boundaries; variational problems with movable boundaries and other problems; sufficiency conditions for an extremum; variational problems of constrained extrema; and direct methods of solving variational problems. Each chapter features nu

Variational principle for gravity with null and non-null boundaries: a unified boundary counter-term

Energy Technology Data Exchange (ETDEWEB)

Parattu, Krishnamohan; Chakraborty, Sumanta; Padmanabhan, T. [IUCAA, Post Bag 4, Pune (India)

2016-03-15

It is common knowledge that the Einstein-Hilbert action does not furnish a well-posed variational principle. The usual solution to this problem is to add an extra boundary term to the action, called a counter-term, so that the variational principle becomes well-posed. When the boundary is spacelike or timelike, the Gibbons-Hawking-York counter-term is the most widely used. For null boundaries, we had proposed a counter-term in a previous paper. In this paper, we extend the previous analysis and propose a counter-term that can be used to eliminate variations of the ''off-the-surface'' derivatives of the metric on any boundary, regardless of its spacelike, timelike or null nature. (orig.)

Chinese L1 children's English L2 verb morphology over time: individual variation in long-term outcomes.

Science.gov (United States)

Paradis, Johanne; Tulpar, Yasemin; Arppe, Antti

2016-05-01

This study examined accuracy in production and grammaticality judgements of verb morphology by eighteen Chinese-speaking children learning English as a second language (L2) followed longitudinally from four to six years of exposure to English, and who began to learn English at age 4;2. Children's growth in accuracy with verb morphology reached a plateau by six years, where 11/18 children did not display native-speaker levels of accuracy for one or more morphemes. Variation in children's accuracy with verb morphology was predicted by their English vocabulary size and verbal short-term memories primarily, and quality and quantity of English input at home secondarily. This study shows that even very young L2 learners might not all catch up to native speakers in this time frame and that non-age factors play a role in determining individual variation in child L2 learners' long-term outcomes with English morphology.

Automatic Derivation of Statistical Algorithms: The EM Family and Beyond

OpenAIRE

Gray, Alexander G.; Fischer, Bernd; Schumann, Johann; Buntine, Wray

2003-01-01

Machine learning has reached a point where many probabilistic methods can be understood as variations, extensions and combinations of a much smaller set of abstract themes, e.g., as different instances of the EM algorithm. This enables the systematic derivation of algorithms customized for different models. Here, we describe the AUTOBAYES system which takes a high-level statistical model specification, uses powerful symbolic techniques based on schema-based program synthesis and computer alge...

Peptaibols, tetramic acid derivatives, isocoumarins, and sesquiterpenes from a Bionectria sp. (MSX 47401).

Science.gov (United States)

Figueroa, Mario; Raja, Huzefa; Falkinham, Joseph O; Adcock, Audrey F; Kroll, David J; Wani, Mansukh C; Pearce, Cedric J; Oberlies, Nicholas H

2013-06-28

An extract of the filamentous fungus Bionectria sp. (MSX 47401) showed both promising cytotoxic activity (>90% inhibition of H460 cell growth at 20 μg/mL) and antibacterial activity against methicillin-resistant Staphylococcus aureus (MRSA). A bioactivity-directed fractionation study yielded one new peptaibol (1) and one new tetramic acid derivative (2), and the fungus biosynthesized diverse secondary metabolites with mannose-derived units. Five known compounds were also isolated: clonostachin (3), virgineone (4), virgineone aglycone (5), AGI-7 (6), and 5,6-dihydroxybisabolol (7). Compounds 5 and 7 have not been described previously from natural sources. Compound 1 represents the second member of the peptaibol structural class that contains an ester-linked sugar alcohol (mannitol) instead of an amide-linked amino alcohol, and peptaibols and tetramic acid derivatives have not been isolated previously from the same fungus. The structures of the new compounds were elucidated primarily by high-field NMR (950 and 700 MHz), HRESIMS/MS, and chemical degradations (Marfey's analysis). All compounds (except 6) were examined for antibacterial and antifungal activities. Compounds 2, 4, and 5 showed antimicrobial activity against S. aureus and several MRSA isolates.

A Variational Model for Two-Phase Immiscible Electroosmotic Flow at Solid Surfaces

KAUST Repository

Shao, Sihong

2012-01-01

We develop a continuum hydrodynamic model for two-phase immiscible flows that involve electroosmotic effect in an electrolyte and moving contact line at solid surfaces. The model is derived through a variational approach based on the Onsager principle of minimum energy dissipation. This approach was first presented in the derivation of a continuum hydrodynamic model for moving contact line in neutral two-phase immiscible flows (Qian, Wang, and Sheng, J. Fluid Mech. 564, 333-360 (2006)). Physically, the electroosmotic effect can be formulated by the Onsager principle as well in the linear response regime. Therefore, the same variational approach is applied here to the derivation of the continuum hydrodynamic model for charged two-phase immiscible flows where one fluid component is an electrolyte exhibiting electroosmotic effect on a charged surface. A phase field is employed to model the diffuse interface between two immiscible fluid components, one being the electrolyte and the other a nonconductive fluid, both allowed to slip at solid surfaces. Our model consists of the incompressible Navier-Stokes equation for momentum transport, the Nernst-Planck equation for ion transport, the Cahn-Hilliard phase-field equation for interface motion, and the Poisson equation for electric potential, along with all the necessary boundary conditions. In particular, all the dynamic boundary conditions at solid surfaces, including the generalized Navier boundary condition for slip, are derived together with the equations of motion in the bulk region. Numerical examples in two-dimensional space, which involve overlapped electric double layer fields, have been presented to demonstrate the validity and applicability of the model, and a few salient features of the two-phase immiscible electroosmotic flows at solid surface. The wall slip in the vicinity of moving contact line and the Smoluchowski slip in the electric double layer are both investigated. © 2012 Global-Science Press.

Brain-derived neurotrophic factor in human subjects with function-altering melanocortin-4 receptor variants

Science.gov (United States)

In rodents, hypothalamic brain-derived neurotrophic factor (BDNF) expression appears to be regulated by melanocortin-4 receptor (MC4R) activity. The impact of MC4R genetic variation on circulating BDNF in humans is unknown. The objective of this study is to compare BDNF concentrations of subjects wi...

Patterns of DNA barcode variation in Canadian marine molluscs.

Science.gov (United States)

Layton, Kara K S; Martel, André L; Hebert, Paul D N

2014-01-01

Molluscs are the most diverse marine phylum and this high diversity has resulted in considerable taxonomic problems. Because the number of species in Canadian oceans remains uncertain, there is a need to incorporate molecular methods into species identifications. A 648 base pair segment of the cytochrome c oxidase subunit I gene has proven useful for the identification and discovery of species in many animal lineages. While the utility of DNA barcoding in molluscs has been demonstrated in other studies, this is the first effort to construct a DNA barcode registry for marine molluscs across such a large geographic area. This study examines patterns of DNA barcode variation in 227 species of Canadian marine molluscs. Intraspecific sequence divergences ranged from 0-26.4% and a barcode gap existed for most taxa. Eleven cases of relatively deep (>2%) intraspecific divergence were detected, suggesting the possible presence of overlooked species. Structural variation was detected in COI with indels found in 37 species, mostly bivalves. Some indels were present in divergent lineages, primarily in the region of the first external loop, suggesting certain areas are hotspots for change. Lastly, mean GC content varied substantially among orders (24.5%-46.5%), and showed a significant positive correlation with nearest neighbour distances. DNA barcoding is an effective tool for the identification of Canadian marine molluscs and for revealing possible cases of overlooked species. Some species with deep intraspecific divergence showed a biogeographic partition between lineages on the Atlantic, Arctic and Pacific coasts, suggesting the role of Pleistocene glaciations in the subdivision of their populations. Indels were prevalent in the barcode region of the COI gene in bivalves and gastropods. This study highlights the efficacy of DNA barcoding for providing insights into sequence variation across a broad taxonomic group on a large geographic scale.

Tissue culture-induced genetic and epigenetic variation in triticale (× Triticosecale spp. Wittmack ex A. Camus 1927) regenerants.

Science.gov (United States)

Machczyńska, Joanna; Zimny, Janusz; Bednarek, Piotr Tomasz

2015-10-01

Plant regeneration via in vitro culture can induce genetic and epigenetic variation; however, the extent of such changes in triticale is not yet understood. In the present study, metAFLP, a variation of methylation-sensitive amplified fragment length polymorphism analysis, was used to investigate tissue culture-induced variation in triticale regenerants derived from four distinct genotypes using androgenesis and somatic embryogenesis. The metAFLP technique enabled identification of both sequence and DNA methylation pattern changes in a single experiment. Moreover, it was possible to quantify subtle effects such as sequence variation, demethylation, and de novo methylation, which affected 19, 5.5, 4.5% of sites, respectively. Comparison of variation in different genotypes and with different in vitro regeneration approaches demonstrated that both the culture technique and genetic background of donor plants affected tissue culture-induced variation. The results showed that the metAFLP approach could be used for quantification of tissue culture-induced variation and provided direct evidence that in vitro plant regeneration could cause genetic and epigenetic variation.

Genome-size Variation in Switchgrass (Panicum virgatum: Flow Cytometry and Cytology Reveal Rampant Aneuploidy

Directory of Open Access Journals (Sweden)

Denise E. Costich

2010-11-01

Full Text Available Switchgrass ( L., a native perennial dominant of the prairies of North America, has been targeted as a model herbaceous species for biofeedstock development. A flow-cytometric survey of a core set of 11 primarily upland polyploid switchgrass accessions indicated that there was considerable variation in genome size within each accession, particularly at the octoploid (2 = 8 = 72 chromosome ploidy level. Highly variable chromosome counts in mitotic cell preparations indicated that aneuploidy was more common in octoploids (86.3% than tetraploids (23.2%. Furthermore, the incidence of hyper- versus hypoaneuploidy is equivalent in tetraploids. This is clearly not the case in octoploids, where close to 90% of the aneuploid counts are lower than the euploid number. Cytogenetic investigation using fluorescent in situ hybridization (FISH revealed an unexpected degree of variation in chromosome structure underlying the apparent genomic instability of this species. These results indicate that rapid advances in the breeding of polyploid biofuel feedstocks, based on the molecular-genetic dissection of biomass characteristics and yield, will be predicated on the continual improvement of our understanding of the cytogenetics of these species.

Schwinger variational principle in the nuclear two-body problem and multichannel theory

International Nuclear Information System (INIS)

Zubarev, A.L.; Podkopaev, A.P.

1978-01-01

The aim of the investigation is to study the Schwinger variational principle in the nuclear two-body problem and the multichannel theory. An approach is proposed to problems of the potential scattering based on the substitution of the exact potential operator V by the finite rank operator Vsup((n)) with which the dynamic equations are solved exactly. The functionals obtained for observed values coincide with corresponding expressions derived by the Schwinger variational principle with the set of test functions. The determination of the Schwinger variational principle is given. The method is given for finding amplitude of the double-particle scattering with the potential Vsup((n)). The corresponding amplitudes are constructed within the framework of the multichannel potential model. Interpolation formula for determining amplitude, which describes with high accuracy a process of elastic scattering for any energies, is obtained. On the basis of the above method high-energy amplitude may be obtained within the range of small and large scattering angles

Variations between Dust and Gas in the Diffuse Interstellar Medium. III. Changes in Dust Properties

Science.gov (United States)

Reach, William T.; Bernard, Jean-Philippe; Jarrett, Thomas H.; Heiles, Carl

2017-12-01

We study infrared emission of 17 isolated, diffuse clouds with masses of order {10}2 {M}ȯ to test the hypothesis that grain property variations cause the apparently low gas-to-dust ratios that have been measured in those clouds. Maps of the clouds were constructed from Wide-field Infrared Survey Explorer (WISE) data and directly compared with the maps of dust optical depth from Planck. The mid-infrared emission per unit dust optical depth has a significant trend toward lower values at higher optical depths. The trend can be quantitatively explained by the extinction of starlight within the clouds. The relative amounts of polycyclic aromatic hydrocarbon and very small grains traced by WISE, compared with large grains tracked by Planck, are consistent with being constant. The temperature of the large grains significantly decreases for clouds with larger dust optical depth; this trend is partially due to dust property variations, but is primarily due to extinction of starlight. We updated the prediction for molecular hydrogen column density, taking into account variations in dust properties, and find it can explain the observed dust optical depth per unit gas column density. Thus, the low gas-to-dust ratios in the clouds are most likely due to “dark gas” that is molecular hydrogen.

Microclimate Variations between Semienclosed and Open Sections of a Marathon Route

Directory of Open Access Journals (Sweden)

Paulina Wong

2013-01-01

Full Text Available The Hong Kong Standard Chartered Marathon, held annually, is one of the most popular international marathon events. Its primarily urban environmental setting characterized by high-density urban areas, semienclosed tunnels, and suspension bridges, together with the herds of runners, has an influence on the microclimate along the marathon course. This study focused on assessing and comparing variations in temperature and vapour pressure (vis-à-vis relative humidity against the crowd of runners, or the herd effects, in two different environmental settings along the marathon course: semienclosed (a tunnel versus open space (a suspension bridge. A series of small iButtons were deployed at strategic locations along the course to undertake minute-by-minute measurements of temperature and relative humidity. It was found that herd effects of varying degrees were present in both semienclosed and open settings. Various environmental differences also played a role in ameliorating or amplifying the climatological effects of the herd of runners. Our study suggests that microclimate variations in different environmental settings and crowd conditions could have an impact on runners. This new knowledge can inform the design of marathon routes. It also establishes the feasibility of employing the iButton logging sensors for widespread deployment and monitoring of meteorological situations.

Propagation properties of Rossby waves for latitudinal β-plane variations of f and zonal variations of the shallow water speed

Directory of Open Access Journals (Sweden)

C. T. Duba

2012-05-01

Full Text Available Using the shallow water equations for a rotating layer of fluid, the wave and dispersion equations for Rossby waves are developed for the cases of both the standard β-plane approximation for the latitudinal variation of the Coriolis parameter f and a zonal variation of the shallow water speed. It is well known that the wave normal diagram for the standard (mid-latitude Rossby wave on a β-plane is a circle in wave number (ky,kx space, whose centre is displaced −β/2 ω units along the negative kx axis, and whose radius is less than this displacement, which means that phase propagation is entirely westward. This form of anisotropy (arising from the latitudinal y variation of f, combined with the highly dispersive nature of the wave, gives rise to a group velocity diagram which permits eastward as well as westward propagation. It is shown that the group velocity diagram is an ellipse, whose centre is displaced westward, and whose major and minor axes give the maximum westward, eastward and northward (southward group speeds as functions of the frequency and a parameter m which measures the ratio of the low frequency-long wavelength Rossby wave speed to the shallow water speed. We believe these properties of group velocity diagram have not been elucidated in this way before. We present a similar derivation of the wave normal diagram and its associated group velocity curve for the case of a zonal (x variation of the shallow water speed, which may arise when the depth of an ocean varies zonally from a continental shelf.

Alteration of terminal heterochromatin and chromosome rearrangements in derivatives of wheat-rye hybrids.

Science.gov (United States)

Fu, Shulan; Lv, Zhenling; Guo, Xiang; Zhang, Xiangqi; Han, Fangpu

2013-08-20

Wheat-rye addition and substitution lines and their self progenies revealed variations in telomeric heterochromatin and centromeres. Furthermore, a mitotically unstable dicentric chromosome and stable multicentric chromosomes were observed in the progeny of a Chinese Spring-Imperial rye 3R addition line. An unstable multicentric chromosome was found in the progeny of a 6R/6D substitution line. Drastic variation of terminal heterochromatin including movement and disappearance of terminal heterochromatin occurred in the progeny of wheat-rye addition line 3R, and the 5RS ditelosomic addition line. Highly stable minichromosomes were observed in the progeny of a monosomic 4R addition line, a ditelosomic 5RS addition line and a 6R/6D substitution line. Minichromosomes, with and without the FISH signals for telomeric DNA (TTTAGGG)n, derived from a monosomic 4R addition line are stable and transmissible to the next generation. The results indicated that centromeres and terminal heterochromatin can be profoundly altered in wheat-rye hybrid derivatives. Copyright © 2013. Published by Elsevier Ltd.

Surface Freshwater Storage Variations in the Orinoco Floodplains Using Multi-Satellite Observations

Directory of Open Access Journals (Sweden)

Frédéric Frappart

2014-12-01

Full Text Available Variations in surface water extent and storage are poorly characterized from regional to global scales. In this study, a multi-satellite approach is proposed to estimate the water stored in the floodplains of the Orinoco Basin at a monthly time-scale using remotely-sensed observations of surface water from the Global Inundation Extent Multi-Satellite (GIEMS and stages from Envisat radar altimetry. Surface water storage variations over 2003–2007 exhibit large interannual variability and a strong seasonal signal, peaking during summer, and associated with the flood pulse. The volume of surface water storage in the Orinoco Basin was highly correlated with the river discharge at Ciudad Bolivar (R = 0.95, the closest station to the mouth where discharge was estimated, although discharge lagged one month behind storage. The correlation remained high (R = 0.73 after removing seasonal effects. Mean annual variations in surface water volume represented ~170 km3, contributing to ~45% of the Gravity Recovery and Climate Experiment (GRACE-derived total water storage variations and representing ~13% of the total volume of water that flowed out of the Orinoco Basin to the Atlantic Ocean.

The influence of thermal inertia on Mars' seasonal pressure variation and the effect of the weather component

Science.gov (United States)

Wood, S. E.; Paige, D. A.

Using a Leighton-Murray type diurnal and seasonal Mars thermal model, we found that it is possible to reproduce the seasonal variation in daily-averaged pressures (approximately 680-890 Pa) measured by Viking Lander 1 (VL1), during years without global dust storms, with a standard deviation of less than 5 Pa. In this simple model, surface CO2, frost condensation, and sublimation rates at each latitude are determined by the net effects of radiation, latent heat, and heat conduction in subsurface soil layers. An inherent assumption of our model is that the seasonal pressure variation is due entirely to the exchange of mass between the atmosphere and polar caps. However, the results of recent Mars GCM modeling have made it clear that there is a significant dynamical contribution to the seasonal pressure variation. This 'weather' component is primarily due to large-scale changes in atmospheric circulation, and its magnitude depends somewhat on the dust content of the atmosphere. The overall form of the theoretical weather component at the location of VL1, as calculated by the AMES GCM, remains the same over the typical range of Mars dust opacities.

Black hole thermodynamics from a variational principle: asymptotically conical backgrounds

Energy Technology Data Exchange (ETDEWEB)

An, Ok Song [SISSA and INFN, Sezione di Trieste,Via Bonomea 265, 34136 Trieste (Italy); Department of Physics, Kim Il Sung University,Ryongnam Dong, TaeSong District, Pyongyang, D.P.R. (Korea, Republic of); ICTP,Strada Costiera 11, 34014 Trieste (Italy); Cvetič, Mirjam [Department of Physics and Astronomy, University of Pennsylvania,209 S 33rd St, Philadelphia, PA 19104 (United States); Center for Applied Mathematics and Theoretical Physics, University of Maribor,Mladinska 3, SI2000 Maribor (Slovenia); Papadimitriou, Ioannis [SISSA and INFN, Sezione di Trieste,Via Bonomea 265, 34136 Trieste (Italy)

2016-03-14

The variational problem of gravity theories is directly related to black hole thermodynamics. For asymptotically locally AdS backgrounds it is known that holographic renormalization results in a variational principle in terms of equivalence classes of boundary data under the local asymptotic symmetries of the theory, which automatically leads to finite conserved charges satisfying the first law of thermodynamics. We show that this connection holds well beyond asymptotically AdS black holes. In particular, we formulate the variational problem for N=2 STU supergravity in four dimensions with boundary conditions corresponding to those obeyed by the so called ‘subtracted geometries’. We show that such boundary conditions can be imposed covariantly in terms of a set of asymptotic second class constraints, and we derive the appropriate boundary terms that render the variational problem well posed in two different duality frames of the STU model. This allows us to define finite conserved charges associated with any asymptotic Killing vector and to demonstrate that these charges satisfy the Smarr formula and the first law of thermodynamics. Moreover, by uplifting the theory to five dimensions and then reducing on a 2-sphere, we provide a precise map between the thermodynamic observables of the subtracted geometries and those of the BTZ black hole. Surface terms play a crucial role in this identification.

Atmospheric transport of urban-derived NHx: Evidence from nitrogen concentration and δ15N in epilithic mosses at Guiyang, SW China

International Nuclear Information System (INIS)

Liu Xueyan; Xiao Huayun; Liu Congqiang; Li Youyi; Xiao Hongwei

2008-01-01

Nitrogen concentration and δ 15 N in 175 epilithic moss samples were investigated along four directions from urban to rural sites in Guiyang, SW China. The spatial variations of moss N concentration and δ 15 N revealed that atmospheric N deposition is dominated by NH x -N from two major sources (urban sewage NH 3 and agricultural NH 3 ), the deposition of urban-derived NH x followed a point source pattern characterized by an exponential decline with distance from the urban center, while the agricultural-derived NH x was shown to be a non-point source. The relationship between moss N concentration and distance (y = 1.5e -0.13x + 1.26) indicated that the maximum transporting distance of urban-derived NH x averaged 41 km from the urban center, and it could be determined from the relationship between moss δ 15 N and distance [y = 2.54 ln(x) - 12.227] that urban-derived NH x was proportionally lower than agricultural-derived NH x in N deposition at sites beyond 17.2 km from the urban center. Consequently, the variation of urban-derived NH x with distance from the urban center could be modeled as y = 56.272e -0.116x - 0.481 in the Guiyang area. - Tissue N concentration and δ 15 N in epilithic mosses may be indicators for atmospheric transport of urban-derived NH x

The use of MAGSAT data to determine secular variation.

Science.gov (United States)

Cain, J.C.; Frayser, J.; Muth, L.; Schmitz, D.

1983-01-01

A combined spatial and secular variation model of the geomagnetic field, labeled M061581, is derived from a selection of MAGSAT data. Secular variation (SV) data computed from linear fits to midnight hourly values from 19 magnetic observatories were also included in the analysis but were seen to have little effect on the model. The SV patterns from this new model are compared with those from the 1980 IGRF and with those for 1970 computed by the DGRF and with the 1960 patterns computed using the GSFC(12/66) model. Most of the features of the M061581 are identical in location and level with those of the 1980 IGRF. Together they confirm that the reversals in sign of field change seen over Asia and North America between 1965 and 1975 are reverting to the pre-1965 states. The M061581 model gives -32 nT/yr for the dipole decay rate, larger than the 70% increase already reported since 1965. -Authors

Tools to analyse and display variations in anatomical delineation

International Nuclear Information System (INIS)

Ebert, Martin A.; McDermott, L.N.; Haworth, A; Van der Wath, E.; Hooton, B.

2012-01-01

Variations in anatomical delineation, principally due to a combination of inter-observer contributions and image-specificity, remain one of the most significant impediments to geometrically-accurate radiotherapy. Quantification of spatial variability of the delineated contours comprising a structure can be made with a variety of metrics, and the availability of software tools to apply such metrics to data collected during inter-observer or repeat-imaging studies would allow their validation. A suite of such tools have been developed which use an Extensible Markup Language format for the exchange of delineated 3D structures with radiotherapy planning or review systems. These tools provide basic operations for manipulating and operating on individual structures and related structure sets, and for deriving statistics on spatial variations of contours that can be mapped onto the surface of a reference structure. Use of these tools on a sample dataset is demonstrated together with import and display of results in the SWAN treatment plan review system.

Chemical compositional, biological, and safety studies of a novel maple syrup derived extract for nutraceutical applications.

Science.gov (United States)

Zhang, Yan; Yuan, Tao; Li, Liya; Nahar, Pragati; Slitt, Angela; Seeram, Navindra P

2014-07-16

Maple syrup has nutraceutical potential given the macronutrients (carbohydrates, primarily sucrose), micronutrients (minerals and vitamins), and phytochemicals (primarily phenolics) found in this natural sweetener. We conducted compositional (ash, fiber, carbohydrates, minerals, amino acids, organic acids, vitamins, phytochemicals), in vitro biological, and in vivo safety (animal toxicity) studies on maple syrup extracts (MSX-1 and MSX-2) derived from two declassified maple syrup samples. Along with macronutrient and micronutrient quantification, thirty-three phytochemicals were identified (by HPLC-DAD), and nine phytochemicals, including two new compounds, were isolated and identified (by NMR) from MSX. At doses of up to 1000 mg/kg/day, MSX was well tolerated with no signs of overt toxicity in rats. MSX showed antioxidant (2,2-diphenyl-1-picrylhydrazyl (DPPH) assay) and anti-inflammatory (in RAW 264.7 macrophages) effects and inhibited glucose consumption (by HepG2 cells) in vitro. Thus, MSX should be further investigated for potential nutraceutical applications given its similarity in chemical composition to pure maple syrup.

Chemical Compositional, Biological, and Safety Studies of a Novel Maple Syrup Derived Extract for Nutraceutical Applications

Science.gov (United States)

2015-01-01

Maple syrup has nutraceutical potential given the macronutrients (carbohydrates, primarily sucrose), micronutrients (minerals and vitamins), and phytochemicals (primarily phenolics) found in this natural sweetener. We conducted compositional (ash, fiber, carbohydrates, minerals, amino acids, organic acids, vitamins, phytochemicals), in vitro biological, and in vivo safety (animal toxicity) studies on maple syrup extracts (MSX-1 and MSX-2) derived from two declassified maple syrup samples. Along with macronutrient and micronutrient quantification, thirty-three phytochemicals were identified (by HPLC-DAD), and nine phytochemicals, including two new compounds, were isolated and identified (by NMR) from MSX. At doses of up to 1000 mg/kg/day, MSX was well tolerated with no signs of overt toxicity in rats. MSX showed antioxidant (2,2-diphenyl-1-picrylhydrazyl (DPPH) assay) and anti-inflammatory (in RAW 264.7 macrophages) effects and inhibited glucose consumption (by HepG2 cells) in vitro. Thus, MSX should be further investigated for potential nutraceutical applications given its similarity in chemical composition to pure maple syrup. PMID:24983789

Graphical Derivatives and Stability Analysis for Parameterized Equilibria with Conic Constraints

Czech Academy of Sciences Publication Activity Database

Mordukhovich, B. S.; Outrata, Jiří; Ramírez, H. C.

2015-01-01

Roč. 23, č. 4 (2015), s. 687-704 ISSN 1877-0533 R&D Projects: GA ČR(CZ) GAP201/12/0671 Institutional support: RVO:67985556 Keywords : Variational analysis and optimization * Parameterized equilibria * Conic constraints * Sensitivity and stability analysis * Solution maps * Graphical derivatives * Normal and tangent cones Subject RIV: BA - General Mathematics Impact factor: 0.973, year: 2015 http://library.utia.cas.cz/separaty/2015/MTR/outrata-0449259.pdf

Noether's Theorem and its Inverse of Birkhoffian System in Event Space Based on Herglotz Variational Problem

Science.gov (United States)

Tian, X.; Zhang, Y.

2018-03-01

Herglotz variational principle, in which the functional is defined by a differential equation, generalizes the classical ones defining the functional by an integral. The principle gives a variational principle description of nonconservative systems even when the Lagrangian is independent of time. This paper focuses on studying the Noether's theorem and its inverse of a Birkhoffian system in event space based on the Herglotz variational problem. Firstly, according to the Herglotz variational principle of a Birkhoffian system, the principle of a Birkhoffian system in event space is established. Secondly, its parametric equations and two basic formulae for the variation of Pfaff-Herglotz action of a Birkhoffian system in event space are obtained. Furthermore, the definition and criteria of Noether symmetry of the Birkhoffian system in event space based on the Herglotz variational problem are given. Then, according to the relationship between the Noether symmetry and conserved quantity, the Noether's theorem is derived. Under classical conditions, Noether's theorem of a Birkhoffian system in event space based on the Herglotz variational problem reduces to the classical ones. In addition, Noether's inverse theorem of the Birkhoffian system in event space based on the Herglotz variational problem is also obtained. In the end of the paper, an example is given to illustrate the application of the results.

Variation in reaction norms: Statistical considerations and biological interpretation.

Science.gov (United States)

Morrissey, Michael B; Liefting, Maartje

2016-09-01

Analysis of reaction norms, the functions by which the phenotype produced by a given genotype depends on the environment, is critical to studying many aspects of phenotypic evolution. Different techniques are available for quantifying different aspects of reaction norm variation. We examine what biological inferences can be drawn from some of the more readily applicable analyses for studying reaction norms. We adopt a strongly biologically motivated view, but draw on statistical theory to highlight strengths and drawbacks of different techniques. In particular, consideration of some formal statistical theory leads to revision of some recently, and forcefully, advocated opinions on reaction norm analysis. We clarify what simple analysis of the slope between mean phenotype in two environments can tell us about reaction norms, explore the conditions under which polynomial regression can provide robust inferences about reaction norm shape, and explore how different existing approaches may be used to draw inferences about variation in reaction norm shape. We show how mixed model-based approaches can provide more robust inferences than more commonly used multistep statistical approaches, and derive new metrics of the relative importance of variation in reaction norm intercepts, slopes, and curvatures. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

Climatic driving forces in inter-annual variation of global FPAR

Science.gov (United States)

Peng, Dailiang; Liu, Liangyun; Yang, Xiaohua; Zhou, Bin

2012-09-01

Fraction of Absorbed Photosynthetically Active Radiation (FPAR) characterizes vegetation canopy functioning and its energy absorption capacity. In this paper, we focus on climatic driving forces in inter-annual variation of global FPAR from 1982 to 2006 by Global Historical Climatology Network (GHCN-Monthly) data. Using FPAR-Simple Ratio Vegetation Index (SR) relationship, Advanced Very High Resolution Radiometer (AVHRR) Global Inventory Modeling and Mapping Studies (GIMMS) Normalized Difference Vegetation Index (NDVI) was used to estimate FPAR at the global scale. The correlation between inter-annual variation of FPAR and temperature, precipitation derived from GHCN-Monthly was examined, during the periods of March-May (MAM), June-August (JJA), September-November (SON), and December-February (DJF) over from 1982 to 2006. The analysis of climatic influence on global FPAR revealed the significant correlation with temperature and precipitation in some meteorological stations area, and a more significant correlation with precipitation was found than which with temperature. Some stations in the regions between 30° N and 60° N and around 30° S in South America, where the annual FPAR variation showed a significant positive correlation with temperature (P forest of Africa and Amazon during the dry season of JJA and SON.

Annual Variation and Global Structures of The DE3 Tide

International Nuclear Information System (INIS)

Ze-Yu, Chen; Da-Ren, Lu

2008-01-01

The SABER/TIMED temperatures taken in 2002–2006 are used to delineate the tidal signals in the middle and upper atmosphere. Then the Hough mode decomposition is applied with the DE3 tide, and the overall features of the seasonal variations and the complete global structures of the tide are observed. Investigation results show that the tide is most prominent at 110 km with the maximal amplitude of > 9K, and exhibits significant seasonal variation with its maximum amplitude always occurring in July every year. Results from the Hough mode decomposition reveal that the tide is composed primarily of two leading propagating Hough modes, i.e., the (−3,3) and the (−3,4) modes, thus is equatorially trapped. Estimation of the mean amplitude of the Hough modes show that the (−3,3) mode and (−3,4) mode exhibit maxima at 110km and 90 km, respectively. The (−3,3) mode plays a predominant role in shaping the global latitude-height structure of the tide, e.g., the vertical scale of > 50km at the equator, and the annual course. Significant influence of the (−3,4) mode is found below 90km, where the tide exhibits anti-symmetric structure about the equator; meanwhile the tide at northern tropical latitudes exhibits smaller vertical wavelength of about 30 km. (geophysics, astronomy, and astrophysics)

Discrete Variational Approach for Modeling Laser-Plasma Interactions

Science.gov (United States)

Reyes, J. Paxon; Shadwick, B. A.

2014-10-01

The traditional approach for fluid models of laser-plasma interactions begins by approximating fields and derivatives on a grid in space and time, leading to difference equations that are manipulated to create a time-advance algorithm. In contrast, by introducing the spatial discretization at the level of the action, the resulting Euler-Lagrange equations have particular differencing approximations that will exactly satisfy discrete versions of the relevant conservation laws. For example, applying a spatial discretization in the Lagrangian density leads to continuous-time, discrete-space equations and exact energy conservation regardless of the spatial grid resolution. We compare the results of two discrete variational methods using the variational principles from Chen and Sudan and Brizard. Since the fluid system conserves energy and momentum, the relative errors in these conserved quantities are well-motivated physically as figures of merit for a particular method. This work was supported by the U. S. Department of Energy under Contract No. DE-SC0008382 and by the National Science Foundation under Contract No. PHY-1104683.

Feature discrimination/identification based upon SAR return variations

Science.gov (United States)

Rasco, W. A., Sr.; Pietsch, R.

1978-01-01

A study of the statistics of The look-to-look variation statistics in the returns recorded in-flight by a digital, realtime SAR system are analyzed. The determination that the variations in the look-to-look returns from different classes do carry information content unique to the classes was illustrated by a model based on four variants derived from four look in-flight SAR data under study. The model was limited to four classes of returns: mowed grass on a athletic field, rough unmowed grass and weeds on a large vacant field, young fruit trees in a large orchard, and metal mobile homes and storage buildings in a large mobile home park. The data population in excess of 1000 returns represented over 250 individual pixels from the four classes. The multivariant discriminant model operated on the set of returns for each pixel and assigned that pixel to one of the four classes, based on the target variants and the probability distribution function of the four variants for each class.

Systematic Derivation of Static Analyses for Software Product Lines

DEFF Research Database (Denmark)

Midtgaard, Jan; Brabrand, Claus; Wasowski, Andrzej

2014-01-01

A recent line of work lifts particular verification and analysis methods to Software Product Lines (SPL). In an effort to generalize such case-by-case approaches, we develop a systematic methodology for lifting program analyses to SPLs using abstract interpretation. Abstract interpretation...... for lifting analyses and Galois connections. We prove that for analyses developed using our method, the soundness of lifting follows by construction. Finally, we discuss approximating variability in an analysis and we derive variational data-flow equations for an example analysis, a constant propagation...

BLAZAR ANTI-SEQUENCE OF SPECTRAL VARIATION WITHIN INDIVIDUAL BLAZARS: CASES FOR MRK 501 AND 3C 279

Energy Technology Data Exchange (ETDEWEB)

Zhang, Jin; Zhang, Shuang-Nan; Liang, En-Wei, E-mail: zhang.jin@hotmail.com [National Astronomical Observatories, Chinese Academy of Sciences, Beijing 100012 (China)

2013-04-10

The jet properties of Mrk 501 and 3C 279 are derived by fitting broadband spectral energy distributions (SEDs) with lepton models. The derived {gamma}{sub b} (the break Lorenz factor of the electron distribution) is 10{sup 4}-10{sup 6} for Mrk 501 and 200 {approx} 600 for 3C 279. The magnetic field strength (B) of Mrk 501 is usually one order of magnitude lower than that of 3C 279, but their Doppler factors ({delta}) are comparable. A spectral variation feature where the peak luminosity is correlated with the peak frequency, which is opposite from the blazar sequence, is observed in the two sources. We find that (1) the peak luminosities of the two bumps in the SEDs for Mrk 501 depend on {gamma}{sub b} in both the observer and co-moving frames, but they are not correlated with B and {delta} and (2) the luminosity variation of 3C 279 is dominated by the external Compton (EC) peak and its peak luminosity is correlated with {gamma}{sub b} and {delta}, but anti-correlated with B. These results suggest that {gamma}{sub b} may govern the spectral variation of Mrk 501 and {delta} and B would be responsible for the spectral variation of 3C 279. The narrow distribution of {gamma}{sub b} and the correlation of {gamma}{sub b} and B in 3C 279 would be due to the cooling from the EC process and the strong magnetic field. Based on our brief discussion, we propose that this spectral variation feature may originate from the instability of the corona but not from the variation of the accretion rate as does the blazar sequence.

The development and characterization of a primarily mineral calcium phosphate - poly(epsilon-caprolactone) biocomposite

Science.gov (United States)

Dunkley, Ian Robert

Orthopaedic reconstruction often involves the surgical introduction of structural implants that provide for rigid fixation, skeletal stabilization, and bone integration. The high stresses incurred by these implanted devices have historically limited material choices to metallic and select polymeric formulations. While mechanical requirements are achieved, these non-degradable materials do not participate actively in the remodeling of the skeleton and present the possibility of long-term failure or rejection. This is particularly relevant in cervical fusion, an orthopaedic procedure to treat damaged, degenerative or diseased intervertebral discs. A significant improvement on the available synthetic bone replacement/regeneration options for implants to treat these conditions in the cervical spine may be achieved with the development of primarily mineral biocomposites comprised of a bioactive ceramic matrix reinforced with a biodegradable polymer. Such a biocomposite may be engineered to possess the clinically required mechanical properties of a particular application, while maintaining the ability to be remodeled completely by the body. A biocomposite of Si-doped calcium phosphate (Si-CaP) and poly(epsilon-caprolactone) (PCL) was developed for application as such a synthetic bone material for potential use as a fusion device in the cervical spine. In this thesis, a method by which high mineral content Si-CaP/PCL biocomposites with interpenetrating matrices of mineral and polymer phases may be prepared will be demonstrated, in addition to the effects of the various preparation parameters on the biocomposite density, porosity and mechanical properties. This new technique by which dense, primarily ceramic Si-CaP/PCL biocomposites were prepared, allowed for the incorporation of mineral contents ranging between 45-97vol%. Polymer infiltration, accomplished solely by passive capillary uptake over several days, was found to be capable of fully infiltrating the microporosity

Balancing selection on a regulatory region exhibiting ancient variation that predates human-neandertal divergence.

Directory of Open Access Journals (Sweden)

Omer Gokcumen

2013-04-01

Full Text Available Ancient population structure shaping contemporary genetic variation has been recently appreciated and has important implications regarding our understanding of the structure of modern human genomes. We identified a ∼36-kb DNA segment in the human genome that displays an ancient substructure. The variation at this locus exists primarily as two highly divergent haplogroups. One of these haplogroups (the NE1 haplogroup aligns with the Neandertal haplotype and contains a 4.6-kb deletion polymorphism in perfect linkage disequilibrium with 12 single nucleotide polymorphisms (SNPs across diverse populations. The other haplogroup, which does not contain the 4.6-kb deletion, aligns with the chimpanzee haplotype and is likely ancestral. Africans have higher overall pairwise differences with the Neandertal haplotype than Eurasians do for this NE1 locus (p<10⁻¹⁵. Moreover, the nucleotide diversity at this locus is higher in Eurasians than in Africans. These results mimic signatures of recent Neandertal admixture contributing to this locus. However, an in-depth assessment of the variation in this region across multiple populations reveals that African NE1 haplotypes, albeit rare, harbor more sequence variation than NE1 haplotypes found in Europeans, indicating an ancient African origin of this haplogroup and refuting recent Neandertal admixture. Population genetic analyses of the SNPs within each of these haplogroups, along with genome-wide comparisons revealed significant FST (p = 0.00003 and positive Tajima's D (p = 0.00285 statistics, pointing to non-neutral evolution of this locus. The NE1 locus harbors no protein-coding genes, but contains transcribed sequences as well as sequences with putative regulatory function based on bioinformatic predictions and in vitro experiments. We postulate that the variation observed at this locus predates Human-Neandertal divergence and is evolving under balancing selection, especially among European

SU-E-T-136: Assessment of Seasonal Linear Accelerator Output Variations and Associated Impacts

International Nuclear Information System (INIS)

Bartolac, S; Letourneau, D

2015-01-01

Purpose: Application of process control theory in quality assurance programs promises to allow earlier identification of problems and potentially better quality in delivery than traditional paradigms based primarily on tolerances and action levels. The purpose of this project was to characterize underlying seasonal variations in linear accelerator output that can be used to improve performance or trigger preemptive maintenance. Methods: Review of runtime plots of daily (6 MV) output data acquired using in house ion chamber based devices over three years and for fifteen linear accelerators of varying make and model were evaluated. Shifts in output due to known interventions with the machines were subtracted from the data to model an uncorrected scenario for each linear accelerator. Observable linear trends were also removed from the data prior to evaluation of periodic variations. Results: Runtime plots of output revealed sinusoidal, seasonal variations that were consistent across all units, irrespective of manufacturer, model or age of machine. The average amplitude of the variation was on the order of 1%. Peak and minimum variations were found to correspond to early April and September, respectively. Approximately 48% of output adjustments made over the period examined were potentially avoidable if baseline levels had corresponded to the mean output, rather than to points near a peak or valley. Linear trends were observed for three of the fifteen units, with annual increases in output ranging from 2–3%. Conclusion: Characterization of cyclical seasonal trends allows for better separation of potentially innate accelerator behaviour from other behaviours (e.g. linear trends) that may be better described as true out of control states (i.e. non-stochastic deviations from otherwise expected behavior) and could indicate service requirements. Results also pointed to an optimal setpoint for accelerators such that output of machines is maintained within set tolerances

SU-E-T-136: Assessment of Seasonal Linear Accelerator Output Variations and Associated Impacts

Energy Technology Data Exchange (ETDEWEB)

Bartolac, S; Letourneau, D [Princess Margaret Cancer Centre, Toronto, Ontario (Canada); University of Toronto, Toronto, Ontario (Canada)

2015-06-15

Purpose: Application of process control theory in quality assurance programs promises to allow earlier identification of problems and potentially better quality in delivery than traditional paradigms based primarily on tolerances and action levels. The purpose of this project was to characterize underlying seasonal variations in linear accelerator output that can be used to improve performance or trigger preemptive maintenance. Methods: Review of runtime plots of daily (6 MV) output data acquired using in house ion chamber based devices over three years and for fifteen linear accelerators of varying make and model were evaluated. Shifts in output due to known interventions with the machines were subtracted from the data to model an uncorrected scenario for each linear accelerator. Observable linear trends were also removed from the data prior to evaluation of periodic variations. Results: Runtime plots of output revealed sinusoidal, seasonal variations that were consistent across all units, irrespective of manufacturer, model or age of machine. The average amplitude of the variation was on the order of 1%. Peak and minimum variations were found to correspond to early April and September, respectively. Approximately 48% of output adjustments made over the period examined were potentially avoidable if baseline levels had corresponded to the mean output, rather than to points near a peak or valley. Linear trends were observed for three of the fifteen units, with annual increases in output ranging from 2–3%. Conclusion: Characterization of cyclical seasonal trends allows for better separation of potentially innate accelerator behaviour from other behaviours (e.g. linear trends) that may be better described as true out of control states (i.e. non-stochastic deviations from otherwise expected behavior) and could indicate service requirements. Results also pointed to an optimal setpoint for accelerators such that output of machines is maintained within set tolerances

Clear-Sky Narrowband Albedo Variations Derived from VIRS and MODIS Data

Science.gov (United States)

Sun-Mack, Sunny; Chen, Yan; Arduini, Robert F.; Minnis, Patrick

2004-01-01

A critical parameter for detecting clouds and aerosols and for retrieving their microphysical properties is the clear-sky radiance. The Clouds and the Earth's Radiant Energy System (CERES) Project uses the visible (VIS; 0.63 m) and near-infrared (NIR; 1.6 or 2.13 m) channels available on same satellites as the CERES scanners. Another channel often used for cloud and aerosol, and vegetation cover retrievals is the vegetation (VEG; 0.86- m) channel that has been available on the Advanced Very High Resolution Radiometer (AVHRR) for many years. Generally, clear-sky albedo for a given surface type is determined for conditions when the vegetation is either thriving or dormant and free of snow. Snow albedo is typically estimated without considering the underlying surface type. The albedo for a surface blanketed by snow, however, should vary with surface type because the vegetation often emerges from the snow to varying degrees depending on the vertical dimensions of the vegetation. For example, a snowcovered prairie will probably be brighter than a snowcovered forest because the snow typically falls off the trees exposing the darker surfaces while the snow on a grassland at the same temperatures will likely be continuous and, therefore, more reflective. Accounting for the vegetation-induced differences should improve the capabilities for distinguishing snow and clouds over different surface types and facilitate improvements in the accuracy of radiative transfer calculations between the snow-covered surface and the atmosphere, eventually leading to improvements in models of the energy budgets over land. This paper presents a more complete analysis of the CERES spectral clear-sky reflectances to determine the variations in clear-sky top-of-atmosphere (TOA) albedos for both snow-free and snow-covered surfaces for four spectral channels using data from Terra and Aqua.. The results should be valuable for improved cloud retrievals and for modeling radiation fields.

Variation in density of cattle-visiting muscid flies between Danish inland pastures

DEFF Research Database (Denmark)

Jensen, Karl-Martin Vagn; Jespersen, Jørgen B.; Nielsen, B. Overgaard

1993-01-01

recorded, whilst the relative abundance and density of the species and the total fly-load varied considerably between pastures. In most cases the mean loads of Haematobia irritans (L.) and Hydrotaea irritans (Fall.) on heifers varied significantly in relation to site topography and shelter. These crude......The density of cattle-visiting flies (Muscidae) and the load of black-flies (Simulium spp.) were estimated in twelve and eighteen inland pastures in Denmark in 1984 and 1985 respectively. No differences in the geographical distribution pattern of the predominant cattle-visiting Muscidae were...... site variables explained 65-98% of the variation in densities of horn flies and sheep head flies observed between pastures. Highest densities of Hydrotaea irritans were primarily associated with permanent, low-lying, fairly sheltered grassland sites, whereas the density was low in temporary, dry, wind...

Influence of geometry variations on the gravitational focusing of timelike geodesic congruences

Science.gov (United States)

Seriu, Masafumi

2015-10-01

We derive a set of equations describing the linear response of the convergence properties of a geodesic congruence to arbitrary geometry variations. It is a combination of equations describing the deviations from the standard Raychaudhuri-type equations due to the geodesic shifts and an equation describing the geodesic shifts due to the geometry variations. In this framework, the geometry variations, which can be chosen arbitrarily, serve as probes to investigate the gravitational contraction processes from various angles. We apply the obtained framework to the case of conformal geometry variations, characterized by an arbitrary function f (x ), and see that the formulas get simplified to a great extent. We investigate the response of the convergence properties of geodesics in the latest phase of gravitational contractions by restricting the class of conformal geometry variations to the one satisfying the strong energy condition. We then find out that in the final stage, f and D .D f control the overall contraction behavior and that the contraction rate gets larger when f is negative and |f | is so large as to overwhelm |D .D f |. (Here D .D is the Laplacian operator on the spatial hypersurfaces orthogonal to the geodesic congruence in concern.) To get more concrete insights, we also apply the framework to the time-reversed Friedmann-Robertson-Walker model as the simplest case of the singularity formations.

Genetic and anatomical analysis of normal and abnormal flowers of date palm cultivar barhy derived from offshoot and tissue culture

International Nuclear Information System (INIS)

Shair, O.H.

2016-01-01

Random Amplified Polymorphic DNA (RAPD) analysis between 6 normal flower producing offshoot derived and 6 abnormal multiple carpel, flower producing tissue culture (TC) derived trees of cultivar (cv.) Barhy, was performed with the objective to check genetic variation if any at DNA level. DNA samples were extracted from pollinated and un-pollinated flowers from both sets of plants. Amplified RAPD products were clearly detected with 30 primers used in this experiment but only 3 gave a few polymorphic bands which shows low level of genetic variation among the offshoot and TC derived plants. Cluster analysis by the unweighted paired group method of arithmetic means (UPGMA) showed close genomic similarity among the 12 DNA samples with the range of 0.486-0.904 Nei and Li's coefficient in the similarity matrix. The average similarity among the 12 DNA samples was more than 50%. Floral abnormalities in TC derived plants were also studied microscopically. Abnormalities like more than three carpel development, abnormal ovule development and deformities of style and stigma were observed. The results show that the composition and the abnormalities of flowers in TC derived plants of cultivar Barhy may be attributed to epigenetic changes that takes place at different stages of tissue culture and not due to major changes at DNA level. (author)

Adaptive influence of extrinsic and intrinsic factors on variation of incubation periods among tropical and temperate passerines

Science.gov (United States)

Martin, Thomas E.; Ton, Riccardo; Oteyza, Juan C.

2018-01-01

Understanding intrinsic (physiological) and extrinsic (e.g., temperature) causes of variation in embryonic development time (incubation period) is important because they can have different impacts on individual quality. Robert Ricklefs and colleagues have argued that longer incubation periods result primarily from intrinsic physiological programs that increase individual quality and adult survival. They claim that incubation periods are largely invariant and that extrinsic factors like temperature have little impact. We have argued that adult survival may be a cause rather than a consequence of much of the variation in embryonic development time. A reduction in extrinsic sources of annual adult mortality (e.g., migration, predation, nonbreeding-season mortality) favors reduced parental effort during incubation to minimize costs to future reproduction and survival. Reduced parental effort, in turn, manifests as cooler average egg temperatures that yield longer incubation periods. Ricklefs and colleagues mischaracterized our hypothesis and deconstructed their own incorrect version, while also making some incorrect statements. We show that reevaluation of previous evidence provided by this group actually supports a role of egg temperature for the variation in incubation periods. We also summarize other observational and experimental evidence that incubation periods are not invariant and that egg temperature has a strong causal influence on variation within and among species. In fact, egg temperature explains ∼60% of the difference in incubation periods among species. The remaining ∼40% reflects intrinsic physiological programs and other factors, potentially providing intrinsic benefits. Ultimately, annual adult mortality explains substantial variation in parental effort and egg temperature, and the latter strongly explains variation in incubation periods. Both intrinsic programs and extrinsic temperature effects need to be considered in attempts to understand

Evaluation of the interindividual human variation in bioactivation of methyleugenol using physiologically based kinetic modeling and Monte Carlo simulations

International Nuclear Information System (INIS)

Al-Subeihi, Ala' A.A.; Alhusainy, Wasma; Kiwamoto, Reiko; Spenkelink, Bert; Bladeren, Peter J. van; Rietjens, Ivonne M.C.M.; Punt, Ans

2015-01-01

The present study aims at predicting the level of formation of the ultimate carcinogenic metabolite of methyleugenol, 1′-sulfooxymethyleugenol, in the human population by taking variability in key bioactivation and detoxification reactions into account using Monte Carlo simulations. Depending on the metabolic route, variation was simulated based on kinetic constants obtained from incubations with a range of individual human liver fractions or by combining kinetic constants obtained for specific isoenzymes with literature reported human variation in the activity of these enzymes. The results of the study indicate that formation of 1′-sulfooxymethyleugenol is predominantly affected by variation in i) P450 1A2-catalyzed bioactivation of methyleugenol to 1′-hydroxymethyleugenol, ii) P450 2B6-catalyzed epoxidation of methyleugenol, iii) the apparent kinetic constants for oxidation of 1′-hydroxymethyleugenol, and iv) the apparent kinetic constants for sulfation of 1′-hydroxymethyleugenol. Based on the Monte Carlo simulations a so-called chemical-specific adjustment factor (CSAF) for intraspecies variation could be derived by dividing different percentiles by the 50th percentile of the predicted population distribution for 1′-sulfooxymethyleugenol formation. The obtained CSAF value at the 90th percentile was 3.2, indicating that the default uncertainty factor of 3.16 for human variability in kinetics may adequately cover the variation within 90% of the population. Covering 99% of the population requires a larger uncertainty factor of 6.4. In conclusion, the results showed that adequate predictions on interindividual human variation can be made with Monte Carlo-based PBK modeling. For methyleugenol this variation was observed to be in line with the default variation generally assumed in risk assessment. - Highlights: • Interindividual human differences in methyleugenol bioactivation were simulated. • This was done using in vitro incubations, PBK modeling

Evaluation of the interindividual human variation in bioactivation of methyleugenol using physiologically based kinetic modeling and Monte Carlo simulations

Energy Technology Data Exchange (ETDEWEB)

Al-Subeihi, Ala' A.A., E-mail: subeihi@yahoo.com [Division of Toxicology, Wageningen University, Tuinlaan 5, 6703 HE Wageningen (Netherlands); BEN-HAYYAN-Aqaba International Laboratories, Aqaba Special Economic Zone Authority (ASEZA), P. O. Box 2565, Aqaba 77110 (Jordan); Alhusainy, Wasma; Kiwamoto, Reiko; Spenkelink, Bert [Division of Toxicology, Wageningen University, Tuinlaan 5, 6703 HE Wageningen (Netherlands); Bladeren, Peter J. van [Division of Toxicology, Wageningen University, Tuinlaan 5, 6703 HE Wageningen (Netherlands); Nestec S.A., Avenue Nestlé 55, 1800 Vevey (Switzerland); Rietjens, Ivonne M.C.M.; Punt, Ans [Division of Toxicology, Wageningen University, Tuinlaan 5, 6703 HE Wageningen (Netherlands)

2015-03-01

The present study aims at predicting the level of formation of the ultimate carcinogenic metabolite of methyleugenol, 1′-sulfooxymethyleugenol, in the human population by taking variability in key bioactivation and detoxification reactions into account using Monte Carlo simulations. Depending on the metabolic route, variation was simulated based on kinetic constants obtained from incubations with a range of individual human liver fractions or by combining kinetic constants obtained for specific isoenzymes with literature reported human variation in the activity of these enzymes. The results of the study indicate that formation of 1′-sulfooxymethyleugenol is predominantly affected by variation in i) P450 1A2-catalyzed bioactivation of methyleugenol to 1′-hydroxymethyleugenol, ii) P450 2B6-catalyzed epoxidation of methyleugenol, iii) the apparent kinetic constants for oxidation of 1′-hydroxymethyleugenol, and iv) the apparent kinetic constants for sulfation of 1′-hydroxymethyleugenol. Based on the Monte Carlo simulations a so-called chemical-specific adjustment factor (CSAF) for intraspecies variation could be derived by dividing different percentiles by the 50th percentile of the predicted population distribution for 1′-sulfooxymethyleugenol formation. The obtained CSAF value at the 90th percentile was 3.2, indicating that the default uncertainty factor of 3.16 for human variability in kinetics may adequately cover the variation within 90% of the population. Covering 99% of the population requires a larger uncertainty factor of 6.4. In conclusion, the results showed that adequate predictions on interindividual human variation can be made with Monte Carlo-based PBK modeling. For methyleugenol this variation was observed to be in line with the default variation generally assumed in risk assessment. - Highlights: • Interindividual human differences in methyleugenol bioactivation were simulated. • This was done using in vitro incubations, PBK modeling

Variation of haemoglobin extinction coefficients can cause errors in the determination of haemoglobin concentration measured by near-infrared spectroscopy

International Nuclear Information System (INIS)

Kim, J G; Liu, H

2007-01-01

Near-infrared spectroscopy or imaging has been extensively applied to various biomedical applications since it can detect the concentrations of oxyhaemoglobin (HbO 2 ), deoxyhaemoglobin (Hb) and total haemoglobin (Hb total ) from deep tissues. To quantify concentrations of these haemoglobin derivatives, the extinction coefficient values of HbO 2 and Hb have to be employed. However, it was not well recognized among researchers that small differences in extinction coefficients could cause significant errors in quantifying the concentrations of haemoglobin derivatives. In this study, we derived equations to estimate errors of haemoglobin derivatives caused by the variation of haemoglobin extinction coefficients. To prove our error analysis, we performed experiments using liquid-tissue phantoms containing 1% Intralipid in a phosphate-buffered saline solution. The gas intervention of pure oxygen was given in the solution to examine the oxygenation changes in the phantom, and 3 mL of human blood was added twice to show the changes in [Hb total ]. The error calculation has shown that even a small variation (0.01 cm -1 mM -1 ) in extinction coefficients can produce appreciable relative errors in quantification of Δ[HbO 2 ], Δ[Hb] and Δ[Hb total ]. We have also observed that the error of Δ[Hb total ] is not always larger than those of Δ[HbO 2 ] and Δ[Hb]. This study concludes that we need to be aware of any variation in haemoglobin extinction coefficients, which could result from changes in temperature, and to utilize corresponding animal's haemoglobin extinction coefficients for the animal experiments, in order to obtain more accurate values of Δ[HbO 2 ], Δ[Hb] and Δ[Hb total ] from in vivo tissue measurements

Variation of haemoglobin extinction coefficients can cause errors in the determination of haemoglobin concentration measured by near-infrared spectroscopy

Science.gov (United States)

Kim, J. G.; Liu, H.

2007-10-01

Near-infrared spectroscopy or imaging has been extensively applied to various biomedical applications since it can detect the concentrations of oxyhaemoglobin (HbO2), deoxyhaemoglobin (Hb) and total haemoglobin (Hbtotal) from deep tissues. To quantify concentrations of these haemoglobin derivatives, the extinction coefficient values of HbO2 and Hb have to be employed. However, it was not well recognized among researchers that small differences in extinction coefficients could cause significant errors in quantifying the concentrations of haemoglobin derivatives. In this study, we derived equations to estimate errors of haemoglobin derivatives caused by the variation of haemoglobin extinction coefficients. To prove our error analysis, we performed experiments using liquid-tissue phantoms containing 1% Intralipid in a phosphate-buffered saline solution. The gas intervention of pure oxygen was given in the solution to examine the oxygenation changes in the phantom, and 3 mL of human blood was added twice to show the changes in [Hbtotal]. The error calculation has shown that even a small variation (0.01 cm-1 mM-1) in extinction coefficients can produce appreciable relative errors in quantification of Δ[HbO2], Δ[Hb] and Δ[Hbtotal]. We have also observed that the error of Δ[Hbtotal] is not always larger than those of Δ[HbO2] and Δ[Hb]. This study concludes that we need to be aware of any variation in haemoglobin extinction coefficients, which could result from changes in temperature, and to utilize corresponding animal's haemoglobin extinction coefficients for the animal experiments, in order to obtain more accurate values of Δ[HbO2], Δ[Hb] and Δ[Hbtotal] from in vivo tissue measurements.

Derivation of inner magnetospheric electric field (UNH-IMEF model using Cluster data set

Directory of Open Access Journals (Sweden)

H. Matsui

2008-09-01

Full Text Available We derive an inner magnetospheric electric field (UNH-IMEF model at L=2–10 using primarily Cluster electric field data for more than 5 years between February 2001 and October 2006. This electric field data set is divided into several ranges of the interplanetary electric field (IEF values measured by ACE. As ring current simulations which require electric field as an input parameter are often performed at L=2–6.6, we have included statistical results from ground radars and low altitude satellites inside the perigee of Cluster in our data set (L~4. Electric potential patterns are derived from the average electric fields by solving an inverse problem. The electric potential pattern for small IEF values is probably affected by the ionospheric dynamo. The magnitudes of the electric field increase around the evening local time as IEF increases, presumably due to the sub-auroral polarization stream (SAPS. Another region with enhanced electric fields during large IEF periods is located around 9 MLT at L>8, which is possibly related to solar wind-magnetosphere coupling. Our potential patterns are consistent with those derived from self-consistent simulations. As the potential patterns can be interpolated/extrapolated to any discrete IEF value within measured ranges, we thus derive an empirical electric potential model. The performance of the model is evaluated by comparing the electric field derived from the model with original one measured by Cluster and mapped to the equator. The model is open to the public through our website.

Derivation of inner magnetospheric electric field (UNH-IMEF model using Cluster data set

Directory of Open Access Journals (Sweden)

H. Matsui

2008-09-01

Full Text Available We derive an inner magnetospheric electric field (UNH-IMEF model at L=2–10 using primarily Cluster electric field data for more than 5 years between February 2001 and October 2006. This electric field data set is divided into several ranges of the interplanetary electric field (IEF values measured by ACE. As ring current simulations which require electric field as an input parameter are often performed at L=2–6.6, we have included statistical results from ground radars and low altitude satellites inside the perigee of Cluster in our data set (L~4. Electric potential patterns are derived from the average electric fields by solving an inverse problem. The electric potential pattern for small IEF values is probably affected by the ionospheric dynamo. The magnitudes of the electric field increase around the evening local time as IEF increases, presumably due to the sub-auroral polarization stream (SAPS. Another region with enhanced electric fields during large IEF periods is located around 9 MLT at L>8, which is possibly related to solar wind-magnetosphere coupling. Our potential patterns are consistent with those derived from self-consistent simulations. As the potential patterns can be interpolated/extrapolated to any discrete IEF value within measured ranges, we thus derive an empirical electric potential model. The performance of the model is evaluated by comparing the electric field derived from the model with original one measured by Cluster and mapped to the equator. The model is open to the public through our website.

The emotional impact of fundamentalist religious participation: an empirical study of intragroup variation.

Science.gov (United States)

Ness, Robert C; Wintrob, Ronald M

1980-04-01

The relationship between religious activity within a Pentecostal congregation and the emotional status of the congregants is described. Data derived from a field study conducted in a Newfoundland coastal community. The more frequently people engaged in religious activities, the less likely they were to report symptoms of emotional distress. Significant within-group variation was found in terms of the frequency and type of religious activity.

Tuberculin purified protein derivative-reactive T cells in cord blood lymphocytes.

OpenAIRE

Shiratsuchi, H; Tsuyuguchi, I

1981-01-01

Lymphocytes obtained from cord blood of newborn babies who were born of healthy mothers were studied in vitro for their responsiveness to purified protein derivative (PPD) of tuberculin. Cord blood lymphocytes proliferated in vitro by stimulation with PPD, despite wide variations in the results. Studies with fractionated lymphocytes revealed that PPD-responding cells belonged to E-rosetting, nylon wool-nonadherent T lymphocytes. Non-E-rosetting B lymphocytes alone did not proliferate at all a...

Tumor-derived circulating endothelial cell clusters in colorectal cancer.

KAUST Repository

Cima, Igor; Kong, Say Li; Sengupta, Debarka; Tan, Iain B; Phyo, Wai Min; Lee, Daniel; Hu, Min; Iliescu, Ciprian; Alexander, Irina; Goh, Wei Lin; Rahmani, Mehran; Suhaimi, Nur-Afidah Mohamed; Vo, Jess H; Tai, Joyce A; Tan, Joanna H; Chua, Clarinda; Ten, Rachel; Lim, Wan Jun; Chew, Min Hoe; Hauser, Charlotte; van Dam, Rob M; Lim, Wei-Yen; Prabhakar, Shyam; Lim, Bing; Koh, Poh Koon; Robson, Paul; Ying, Jackie Y; Hillmer, Axel M; Tan, Min-Han

2016-01-01

Clusters of tumor cells are often observed in the blood of cancer patients. These structures have been described as malignant entities for more than 50 years, although their comprehensive characterization is lacking. Contrary to current consensus, we demonstrate that a discrete population of circulating cell clusters isolated from the blood of colorectal cancer patients are not cancerous but consist of tumor-derived endothelial cells. These clusters express both epithelial and mesenchymal markers, consistent with previous reports on circulating tumor cell (CTC) phenotyping. However, unlike CTCs, they do not mirror the genetic variations of matched tumors. Transcriptomic analysis of single clusters revealed that these structures exhibit an endothelial phenotype and can be traced back to the tumor endothelium. Further results show that tumor-derived endothelial clusters do not form by coagulation or by outgrowth of single circulating endothelial cells, supporting a direct release of clusters from the tumor vasculature. The isolation and enumeration of these benign clusters distinguished healthy volunteers from treatment-naïve as well as pathological early-stage (≤IIA) colorectal cancer patients with high accuracy, suggesting that tumor-derived circulating endothelial cell clusters could be used as a means of noninvasive screening for colorectal cancer. In contrast to CTCs, tumor-derived endothelial cell clusters may also provide important information about the underlying tumor vasculature at the time of diagnosis, during treatment, and throughout the course of the disease.

Tumor-derived circulating endothelial cell clusters in colorectal cancer.

KAUST Repository

Cima, Igor

2016-06-29

Clusters of tumor cells are often observed in the blood of cancer patients. These structures have been described as malignant entities for more than 50 years, although their comprehensive characterization is lacking. Contrary to current consensus, we demonstrate that a discrete population of circulating cell clusters isolated from the blood of colorectal cancer patients are not cancerous but consist of tumor-derived endothelial cells. These clusters express both epithelial and mesenchymal markers, consistent with previous reports on circulating tumor cell (CTC) phenotyping. However, unlike CTCs, they do not mirror the genetic variations of matched tumors. Transcriptomic analysis of single clusters revealed that these structures exhibit an endothelial phenotype and can be traced back to the tumor endothelium. Further results show that tumor-derived endothelial clusters do not form by coagulation or by outgrowth of single circulating endothelial cells, supporting a direct release of clusters from the tumor vasculature. The isolation and enumeration of these benign clusters distinguished healthy volunteers from treatment-naïve as well as pathological early-stage (≤IIA) colorectal cancer patients with high accuracy, suggesting that tumor-derived circulating endothelial cell clusters could be used as a means of noninvasive screening for colorectal cancer. In contrast to CTCs, tumor-derived endothelial cell clusters may also provide important information about the underlying tumor vasculature at the time of diagnosis, during treatment, and throughout the course of the disease.

Geographic variation in floral allometry suggests repeated transitions between selfing and outcrossing in a mixed mating plant.

Science.gov (United States)

Summers, Holly E; Hartwick, Sally M; Raguso, Robert A

2015-05-01

Isometric and allometric scaling of a conserved floral plan could provide a parsimonious mechanism for rapid and reversible transitions between breeding systems. This scaling may occur during transitions between predominant autogamy and xenogamy, contributing to the maintenance of a stable mixed mating system. We compared nine disjunct populations of the polytypic, mixed mating species Oenothera flava (Onagraceae) to two parapatric relatives, the obligately xenogamous species O. acutissima and the mixed mating species O. triloba. We compared floral morphology of all taxa using principal component analysis (PCA) and developmental trajectories of floral organs using ANCOVA homogeneity of slopes. The PCA revealed both isometric and allometric scaling of a conserved floral plan. Three principal components (PCs) explained 92.5% of the variation in the three species. PC1 predominantly loaded on measures of floral size and accounts for 36% of the variation. PC2 accounted for 35% of the variation, predominantly in traits that influence pollinator handling. PC3 accounted for 22% of the variation, primarily in anther-stigma distance (herkogamy). During O. flava subsp. taraxacoides development, style elongation was accelerated relative to anthers, resulting in positive herkogamy. During O. flava subsp. flava development, style elongation was decelerated, resulting in zero or negative herkogamy. Of the two populations with intermediate morphology, style elongation was accelerated in one population and decelerated in the other. Isometric and allometric scaling of floral organs in North American Oenothera section Lavauxia drive variation in breeding system. Multiple developmental paths to intermediate phenotypes support the likelihood of multiple mating system transitions. © 2015 Botanical Society of America, Inc.

Variation in the Apparent Biosynthetic Fractionation for N-alkane δD Among Terrestrial Plants: Patterns, Mechanisms, and Implications

Science.gov (United States)

Johnson, J. E.; Tipple, B. J.; Betancourt, J. L.; Ehleringer, J. R.; Leavitt, S. W.; Monson, R. K.

2016-12-01

Long-chain normal alkanes (n-alkanes) are a component of the leaf cuticle of all terrestrial plants. Since the hydrogen in the n-alkanes is derived from the hydrogen in plants' water sources and is non-exchangeable, the stable hydrogen isotopic composition (δD) of the n-alkanes provides information about the δD of environmental waters. While this relationship creates opportunities for using n-alkane δD for process-based reconstructions of δD of environmental waters, progress in this direction is currently constrained by the observation that terrestrial plants exhibit a startlingly wide range of apparent biosynthetic fractionations. To understand the mechanisms responsible for variation in the apparent biosynthetic fractionations, we compared measurements and models of δD for n-C29 in a water-limited ecosystem where the timing of primary and secondary cuticle deposition is closely coupled to water availability (Tumamoc Hill, Tucson, Arizona, USA). During the 2014-2015 hydrologic year, the most widespread and abundant plant species at this site exhibited δD for n-C29 varying over a total range of 102‰. Discrete samples of leaf water collected at the same time as the n-C29 samples exhibited δD varying over a total range of only 53‰, but a continuous model of leaf water through the annual cycle predicted δD varying over a total range of 190‰. These results indicate that the observed variation in the apparent biosynthetic fractionation for n-C29 δD could be primarily attributable to leaf water dynamics that are temporally uncoupled from primary and secondary cuticle deposition. If a single biosynthetic fractionation does describe the relationship between the δD of n-alkanes and leaf water during intervals of cuticle deposition, it will facilitate process-based interpretations of n-alkane δD values in ecological, hydrological, and climatological studies of modern and ancient terrestrial environments.

Variational method for the minimization of entropy generation in solar cells

Energy Technology Data Exchange (ETDEWEB)

Smit, Sjoerd; Kessels, W. M. M., E-mail: w.m.m.kessels@tue.nl [Department of Applied Physics, Eindhoven University of Technology, P.O. Box 513, 5600 MB Eindhoven (Netherlands)

2015-04-07

In this work, a method is presented to extend traditional solar cell simulation tools to make it possible to calculate the most efficient design of practical solar cells. The method is based on the theory of nonequilibrium thermodynamics, which is used to derive an expression for the local entropy generation rate in the solar cell, making it possible to quantify all free energy losses on the same scale. The framework of non-equilibrium thermodynamics can therefore be combined with the calculus of variations and existing solar cell models to minimize the total entropy generation rate in the cell to find the most optimal design. The variational method is illustrated by applying it to a homojunction solar cell. The optimization results in a set of differential algebraic equations, which determine the optimal shape of the doping profile for given recombination and transport models.

Utilising identifier error variation in linkage of large administrative data sources

Directory of Open Access Journals (Sweden)

Katie Harron

2017-02-01

Full Text Available Abstract Background Linkage of administrative data sources often relies on probabilistic methods using a set of common identifiers (e.g. sex, date of birth, postcode. Variation in data quality on an individual or organisational level (e.g. by hospital can result in clustering of identifier errors, violating the assumption of independence between identifiers required for traditional probabilistic match weight estimation. This potentially introduces selection bias to the resulting linked dataset. We aimed to measure variation in identifier error rates in a large English administrative data source (Hospital Episode Statistics; HES and to incorporate this information into match weight calculation. Methods We used 30,000 randomly selected HES hospital admissions records of patients aged 0–1, 5–6 and 18–19 years, for 2011/2012, linked via NHS number with data from the Personal Demographic Service (PDS; our gold-standard. We calculated identifier error rates for sex, date of birth and postcode and used multi-level logistic regression to investigate associations with individual-level attributes (age, ethnicity, and gender and organisational variation. We then derived: i weights incorporating dependence between identifiers; ii attribute-specific weights (varying by age, ethnicity and gender; and iii organisation-specific weights (by hospital. Results were compared with traditional match weights using a simulation study. Results Identifier errors (where values disagreed in linked HES-PDS records or missing values were found in 0.11% of records for sex and date of birth and in 53% of records for postcode. Identifier error rates differed significantly by age, ethnicity and sex (p < 0.0005. Errors were less frequent in males, in 5–6 year olds and 18–19 year olds compared with infants, and were lowest for the Asian ethic group. A simulation study demonstrated that substantial bias was introduced into estimated readmission rates in the presence

Why do Investors Buy Sovereign Default Insurance?

DEFF Research Database (Denmark)

Augustin, Patrick; Sokolovski, Valeri; Subrahmanyam, Marti G.

local and regional channels that may explain the trading in sovereign CDS: (a) country-specific credit risk shocks, including changes in a country's credit rating and related outlook changes, (b) the announcement and issuance of domestic and international debt, (c) macroeconomic sentiment derived from......We provide a comprehensive analysis of the determinants of trading in the sovereign credit default swaps (CDS) market, using weekly data for single-name sovereign CDS from October 2008 to September 2015. We describe the anatomy of the sovereign CDS market, derive a law of motion for gross positions...... of the variation in sovereign CDS net notional amounts outstanding. Moreover, unlike for CDS spreads, common global factors explain very little of the variation in sovereign CDS trading and net notional amounts outstanding, suggesting that it is driven primarily by idiosyncratic country risk. We analyze several...

Quantum Variational Calculus

OpenAIRE

Malinowska , Agnieszka B.; Torres , Delfim

2014-01-01

International audience; Introduces readers to the treatment of the calculus of variations with q-differences and Hahn difference operators Provides the reader with the first extended treatment of quantum variational calculus Shows how the techniques described can be applied to economic models as well as other mathematical systems This Brief puts together two subjects, quantum and variational calculi by considering variational problems involving Hahn quantum operators. The main advantage of it...

A variational principle for computing nonequilibrium fluxes and potentials in genome-scale biochemical networks.

Science.gov (United States)

Fleming, R M T; Maes, C M; Saunders, M A; Ye, Y; Palsson, B Ø

2012-01-07

We derive a convex optimization problem on a steady-state nonequilibrium network of biochemical reactions, with the property that energy conservation and the second law of thermodynamics both hold at the problem solution. This suggests a new variational principle for biochemical networks that can be implemented in a computationally tractable manner. We derive the Lagrange dual of the optimization problem and use strong duality to demonstrate that a biochemical analogue of Tellegen's theorem holds at optimality. Each optimal flux is dependent on a free parameter that we relate to an elementary kinetic parameter when mass action kinetics is assumed. Copyright © 2011 Elsevier Ltd. All rights reserved.

Daytime Variations of Tear Osmolarity Measurement in Dry Eye Patients

Directory of Open Access Journals (Sweden)

Ulviye Yiğit

2013-12-01

Full Text Available Purpose: We have targeted primarily to show the variations of tear osmolarity during the daytime period in subjects with dry eyes and non-dry eyes and, secondarily, to evaluate the relationship of these variations with Schirmer’s test and break-up time (BUT. Material and Method: Twenty newly diagnosed dry eye patients and 20 healthy voluntary subjects with similar age and gender were included in this prospective study. In addition to the full ophthalmic examination, Schirmer’s test and BUT test were applied to all participants. Tear osmolarity measurements were done after pre-examination but in different day. The measurements were registered with TearLab Osmolarity System (TearLab Corporation, San Diego, CA, USA every 3 hours within 8:00 AM and 5:00 PM. The results were evaluated statistically. Results: No statistically significant difference was found between the mean age and gender of dry eye syndrome (DES and control groups (p>0.05. The mean measurements of Schirmer’s test and BUT in the DES group were statistically significantly lower than those in the control group (p=0.0001. The mean measurements of tear osmolarity at 8:00 AM, 11:00 AM, 2:00 PM, and 5:00 PM in the DES group were statistically significantly higher than those in the control group (p=0.001, p=0.0001. No statistically significant difference in tear osmolarity at 8:00 AM, 11: 00 AM, 2:00 PM, and 5:00 PM was found between the groups, and within DES and control groups (p>0.05. Discussion: We did not determine significant change in daytime variations of the tear osmolarity in dry eye patients and healthy subjects. As a secondary result, we can conclude that there is no difference among tear osmolarity, Shirmer’s and BUT tests in the diagnosis of DES. (Turk J Ophthalmol 2013; 43: 437-41

Variations of tropospheric methane over Japan during 1988–2010

Directory of Open Access Journals (Sweden)

Taku Umezawa

2014-05-01

Full Text Available We present observations of CH4 concentrations from the lower to upper troposphere (LT and UT over Japan during 1988–2010 based on aircraft measurements from the Tohoku University (TU. The analysis is aided by simulation results using an atmospheric chemistry transport model (i.e. ACTM. Tropospheric CH4 over Japan shows interannual and seasonal variations that are dependent on altitudes, primarily reflecting differences in air mass origins at different altitudes. The long-term trend and interannual variation of CH4 in the LT are consistent with previous reports of measurements at surface baseline stations in the northern hemisphere. However, those in the UT show slightly different features from those in the LT. In the UT, CH4 concentrations show a seasonal maximum in August due to efficient transport of air masses influenced by continental CH4 sources, while LT CH4 reaches its seasonal minimum during summer due to enhanced chemical loss. Vertical profiles of the CH4 concentrations also vary with season, reflecting the seasonal cycles at the respective altitudes. In summer, transport of CH4-rich air from Asian regions elevates UT CH4 levels, forming a uniform vertical profile above the mid-troposphere. On the other hand, CH4 decreases nearly monotonically with altitude in winter–spring. The ACTM simulations with different emission scenarios reproduce general features of the tropospheric CH4 variations over Japan. Tagged tracer simulations using the ACTM indicate substantial contributions of CH4 sources in South Asia and East Asia to the summertime high CH4 values observed in the UT. This suggests that our observations over Japan are highly sensitive to CH4 emission signals particularly from Asia.

Nanoparticles affect PCR primarily via surface interactions with PCR components: using amino-modified silica-coated magnetic nanoparticles as a main model

Science.gov (United States)

Nanomaterials have been widely reported to affect the polymerase chain reaction (PCR). However, many studies in which these effects were observed were not comprehensive, and many of the proposed mechanisms have been primarily speculative. In this work, we used amino-modified silica-coated magnetic n...

Effects of sea surface temperature, cloud radiative and microphysical processes, and diurnal variations on rainfall in equilibrium cloud-resolving model simulations

International Nuclear Information System (INIS)

Jiang Zhe; Li Xiao-Fan; Zhou Yu-Shu; Gao Shou-Ting

2012-01-01

The effects of sea surface temperature (SST), cloud radiative and microphysical processes, and diurnal variations on rainfall statistics are documented with grid data from the two-dimensional equilibrium cloud-resolving model simulations. For a rain rate of higher than 3 mm·h −1 , water vapor convergence prevails. The rainfall amount decreases with the decrease of SST from 29 °C to 27 °C, the inclusion of diurnal variation of SST, or the exclusion of microphysical effects of ice clouds and radiative effects of water clouds, which are primarily associated with the decreases in water vapor convergence. However, the amount of rainfall increases with the increase of SST from 29 °C to 31 °C, the exclusion of diurnal variation of solar zenith angle, and the exclusion of the radiative effects of ice clouds, which are primarily related to increases in water vapor convergence. For a rain rate of less than 3 mm·h −1 , water vapor divergence prevails. Unlike rainfall statistics for rain rates of higher than 3 mm·h −1 , the decrease of SST from 29 °C to 27 °C and the exclusion of radiative effects of water clouds in the presence of radiative effects of ice clouds increase the rainfall amount, which corresponds to the suppression in water vapor divergence. The exclusion of microphysical effects of ice clouds decreases the amount of rainfall, which corresponds to the enhancement in water vapor divergence. The amount of rainfall is less sensitive to the increase of SST from 29 °C to 31 °C and to the radiative effects of water clouds in the absence of the radiative effects of ice clouds. (electromagnetism, optics, acoustics, heat transfer, classical mechanics, and fluid dynamics)

Tracking spatial variation in river load from Andean highlands to inter-Andean valleys

Science.gov (United States)

Tenorio, Gustavo E.; Vanacker, Veerle; Campforts, Benjamin; Álvarez, Lenín; Zhiminaicela, Santiago; Vercruysse, Kim; Molina, Armando; Govers, Gerard

2018-05-01

Mountains play an important role in the denudation of continents and transfer erosion and weathering products to lowlands and oceans. The rates at which erosion and weathering processes take place in mountain regions have a substantial impact on the morphology and biogeochemistry of downstream reaches and lowlands. The controlling factors of physical erosion and chemical weathering and the coupling between the two processes are not yet fully understood. In this study, we report physical erosion and chemical weathering rates for five Andean catchments located in the southern Ecuadorian Andes and investigate their mutual interaction. During a 4-year monitoring period, we sampled river water at biweekly intervals, and we analyzed water samples for major ions and suspended solids. We derived the total annual dissolved, suspended sediment, and ionic loads from the flow frequency curves and adjusted rating curves and used the dissolved and suspended sediment yields as proxies for chemical weathering and erosion rates. In the 4-year period of monitoring, chemical weathering exceeds physical erosion in the high Andean catchments. Whereas physical erosion rates do not exceed 30 t km-2 y-1 in the relict glaciated morphology, chemical weathering rates range between 22 and 59 t km-2 y-1. The variation in chemical weathering is primarily controlled by intrinsic differences in bedrock lithology. Land use has no discernible impact on the weathering rate but leads to a small increase in base cation concentrations because of fertilizer leaching in surface water. When extending our analysis with published data on dissolved and suspended sediment yields from the northern and central Andes, we observe that the river load composition strongly changes in the downstream direction, indicating large heterogeneity of weathering processes and rates within large Andean basins.

Solar activity influence on climatic variations of stratosphere and mesosphere in mid-latitudes

International Nuclear Information System (INIS)

Taubenheim, J.; Entzian, G.; Voncossart, G.

1989-01-01

The direct modulation of temperature of the mid-latitude mesosphere by the solar-cycle EUV variation, which leads to greater heat input at higher solar activity, is well established. Middle atmosphere temperature modulation by the solar cycle is independently confirmed by the variation of reflection heights of low frequency radio waves in the lower ionosphere, which are regularly monitored over about 30 years. As explained elsewhere in detail, these reflection heights depend on the geometric altitude of a certain isobaric surface (near 80 k), and on the solar ionizing Lyman-alpha radiation flux. Knowing the solar cycle variation of Lyman-alpha how much the measured reflection heights would be lowered with the transition from solar minimum to maximum can be calculated, if the vertical baric structure of the neutral atmosphere would remain unchanged. Any discrepancy between expected and observed height change must be explained by an uplifting of the isobaric level from solar minimum to maximum, caused by the temperature rise in the mesosphere. By integrating the solar cycle temperature changes over the height region of the middle atmosphere, and assuming that the lower boundary (tropopause) has no solar cycle variation, the magnitude of this uplifting can be estimated. It is given for the Lidar-derived and for the rocket-measured temperature variations. Comparison suggests that the real amplitude of the solar cycle temperature variation in the mesosphere is underestimated when using the rocket data, but probably overestimated with the Lidar data

The Serotonin Transporter Undergoes Constitutive Internalization and Is Primarily Sorted to Late Endosomes and Lysosomal Degradation*

Science.gov (United States)

Rahbek-Clemmensen, Troels; Bay, Tina; Eriksen, Jacob; Gether, Ulrik; Jørgensen, Trine Nygaard

2014-01-01

The serotonin transporter (SERT) plays a critical role in regulating serotonin signaling by mediating reuptake of serotonin from the extracellular space. The molecular and cellular mechanisms controlling SERT levels in the membrane remain poorly understood. To study trafficking of the surface resident SERT, two functional epitope-tagged variants were generated. Fusion of a FLAG-tagged one-transmembrane segment protein Tac to the SERT N terminus generated a transporter with an extracellular epitope suited for trafficking studies (TacSERT). Likewise, a construct with an extracellular antibody epitope was generated by introducing an HA (hemagglutinin) tag in the extracellular loop 2 of SERT (HA-SERT). By using TacSERT and HA-SERT in antibody-based internalization assays, we show that SERT undergoes constitutive internalization in a dynamin-dependent manner. Confocal images of constitutively internalized SERT demonstrated that SERT primarily co-localized with the late endosomal/lysosomal marker Rab7, whereas little co-localization was observed with the Rab11, a marker of the “long loop” recycling pathway. This sorting pattern was distinct from that of a prototypical recycling membrane protein, the β2-adrenergic receptor. Furthermore, internalized SERT co-localized with the lysosomal marker LysoTracker and not with transferrin. The sorting pattern was further confirmed by visualizing internalization of SERT using the fluorescent cocaine analog JHC1-64 and by reversible and pulse-chase biotinylation assays showing evidence for lysosomal degradation of the internalized transporter. Finally, we found that SERT internalized in response to stimulation with 12-myristate 13-acetate co-localized primarily with Rab7- and LysoTracker-positive compartments. We conclude that SERT is constitutively internalized and that the internalized transporter is sorted mainly to degradation. PMID:24973209

Identification of High-Variation Fields based on Open Satellite Imagery

DEFF Research Database (Denmark)

Jeppesen, Jacob Høxbroe; Jacobsen, Rune Hylsberg; Nyholm Jørgensen, Rasmus

2017-01-01

. The categorization is based on vegetation indices derived from Sentinel-2 satellite imagery. A case study on 7678 winter wheat fields is presented, which employs open data and open source software to analyze the satellite imagery. Furthermore, the method can be automated to deliver categorizations at every update......This paper proposes a simple method for categorizing fields on a regional level, with respect to intra-field variations. It aims to identify fields where the potential benefits of applying precision agricultural practices are highest from an economic and environmental perspective...

(-)Deprenyl and (-)1-phenyl-2-propylaminopentane, [(-)PPAP], act primarily as potent stimulants of action potential-transmitter release coupling in the catecholaminergic neurons.

Science.gov (United States)

Knoll, J; Miklya, I; Knoll, B; Markó, R; Kelemen, K

1996-01-01

The activity of the catecholaminergic neurons in the rat brain is enhanced significantly 30 min after the subcutaneous injection of very small doses of (-)deprenyl (threshold doses: 0.01 mg/kg for noradrenergic neurons and 0.025 mg/kg for dopaminergic neurons). As a catecholaminergic activity enhancer (CAE) substance (-)deprenyl is about ten times more potent than its parent compound, (-)methamphetamine. While the (+)methamphetamine is 3-5 times more potent than (-)methamphetammine in releasing catecholamines, the (-)methamphetamine is the more potent CAE substance. The mechanism of the CAE effect of (-)deprenyl and (-)PPAP, a deprenyl-derived substance devoid of MAO inhibitory potency, was studied in rats by measuring: a) the release of catecholamines from striatum, substantia nigra, tuberculum olfactorium and locus coeruleus; b) the stimulation induced release of 3H-noradrenaline from the isolated brain stem; and c) the antagonistic effect against tetrabenazine-induced depression of learning in the shuttle box. The CAE effect was found to be unrelated: a) to the inhibition of MAO activity; b) to the inhibition of presynaptic catecholamine receptors; c) to the inhibition of the uptake of catecholamines; and d) to the release of catecholamines. It was concluded that (-)deprenyl and (-)PPAP act primarily as potent stimulants of action potential-transmitter release coupling in the catecholaminergic neurons of the brain. We show that both (-)deprenyl and (-)PPAP enhance the inward Ca2+ current in sino-auricular fibers of the frog heart. (-)PPAP was much more potent than either (+)PPAP or (-)deprenyl in this test.

A moving boundary problem for the Stokes equations involving osmosis : Variational modelling and short-time well-posedness

NARCIS (Netherlands)

Lippoth, F.; Peletier, M.A.; Prokert, G.

2016-01-01

Within the framework of variational modelling we derive a one-phase moving boundary problem describing the motion of a semipermeable membrane enclosing a viscous liquid, driven by osmotic pressure and surface tension of the membrane. For this problem we prove the existence of classical solutions for

Efficient transfection of DNA into primarily cultured rat sertoli cells by electroporation.

Science.gov (United States)

Li, Fuping; Yamaguchi, Kohei; Okada, Keisuke; Matsushita, Kei; Enatsu, Noritoshi; Chiba, Koji; Yue, Huanxun; Fujisawa, Masato

2013-03-01

The expression of exogenous DNA in Sertoli cells is essential for studying its functional genomics, pathway analysis, and medical applications. Electroporation is a valuable tool for nucleic acid delivery, even in primarily cultured cells, which are considered difficult to transfect. In this study, we developed an optimized protocol for electroporation-based transfection of Sertoli cells and compared its efficiency with conventional lipofection. Sertoli cells were transfected with pCMV-GFP plasmid by square-wave electroporation under different conditions. After transfection of plasmid into Sertoli cells, enhanced green fluorescent protein (EGFP) expression could be easily detected by fluorescent microscopy, and cell survival was evaluated by dye exclusion assay using Trypan blue. In terms of both cell survival and the percentage expressing EGFP, 250 V was determined to produce the greatest number of transiently transfected cells. Keeping the voltage constant (250 V), relatively high cell survival (76.5% ± 3.4%) and transfection efficiency (30.6% ± 5.6%) were observed with a pulse length of 20 μm. The number of pulses significantly affected cell survival and EGFP expression (P transfection methods, the transfection efficiency of electroporation (21.5% ± 5.7%) was significantly higher than those of Lipofectamine 2000 (2.9% ± 1.0%) and Effectene (1.9% ± 0.8%) in this experiment (P transfection of Sertoli cells.

Genetic variation of Taenia pisiformis collected from Sichuan, China, based on the mitochondrial cytochrome B gene.

Science.gov (United States)

Yang, Deying; Ren, Yongjun; Fu, Yan; Xie, Yue; Nie, Huaming; Nong, Xiang; Gu, Xiaobin; Wang, Shuxian; Peng, Xuerong; Yang, Guangyou

2013-08-01

Taenia pisiformis is one of the most important parasites of canines and rabbits. T. pisiformis cysticercus (the larval stage) causes severe damage to rabbit breeding, which results in huge economic losses. In this study, the genetic variation of T. pisiformis was determined in Sichuan Province, China. Fragments of the mitochondrial cytochrome b (cytb) (922 bp) gene were amplified in 53 isolates from 8 regions of T. pisiformis. Overall, 12 haplotypes were found in these 53 cytb sequences. Molecular genetic variations showed 98.4% genetic variation derived from intra-region. FST and Nm values suggested that 53 isolates were not genetically differentiated and had low levels of genetic diversity. Neutrality indices of the cytb sequences showed the evolution of T. pisiformis followed a neutral mode. Phylogenetic analysis revealed no correlation between phylogeny and geographic distribution. These findings indicate that 53 isolates of T. pisiformis keep a low genetic variation, which provide useful knowledge for monitoring changes in parasite populations for future control strategies.

An “island” in the stratosphere – on the enhanced annual variation of water vapour in the middle and upper stratosphere in the southern tropics and subtropics

Directory of Open Access Journals (Sweden)

S. Lossow

2017-09-01

Full Text Available The amplitude of the annual variation in water vapour exhibits a distinct isolated maximum in the middle and upper stratosphere in the southern tropics and subtropics, peaking typically around 15° S in latitude and close to 3 hPa (∼  40.5 km in altitude. This enhanced annual variation is primarily related to the Brewer–Dobson circulation and hence also visible in other trace gases. So far this feature has not gained much attention in the literature and the present work aims to add more prominence. Using Envisat/MIPAS (Environmental Satellite/Michelson Interferometer for Passive Atmospheric Sounding observations and ECHAM/MESSy (European Centre for Medium-Range Weather Forecasts Hamburg/Modular Earth Submodel System Atmospheric Chemistry (EMAC simulations we provide a dedicated illustration and a full account of the reasons for this enhanced annual variation.

Simplified equations for the rotational speed response to inflow velocity variation in fixed-pitch small wind turbines

Energy Technology Data Exchange (ETDEWEB)

Suzuki, H; Hasegawa, Y, E-mail: hsuzuki@nitech.ac.jp [Graduate School of Engineering, Nagoya Institute of Technology, Gokiso-cho, Showa-ku, Nagoya 466-8555 (Japan)

2015-02-01

We propose simplified equations for the rotational speed response to inflow velocity variation in fixed-pitch small wind turbines. The present formulation is derived by introducing a series expansion for the torque coefficient at the constant tip-speed ratio. By focusing on the first- and second-order differential coefficients of the torque coefficient, we simplify the original differential equation. The governing equation based only on the first-order differential coefficient is found to be linear, whereas the second-order differential coefficient introduces nonlinearity. We compare the numerical solutions of the three governing equations for rotational speed in response to sinusoidal and normal-random variations of inflow velocity. The linear equation gives accurate solutions of amplitude and phase lag. Nonlinearity occurs in the mean value of rotational speed variation. We also simulate the rotational speed in response to a step input of inflow velocity using the conditions of two previous studies, and note that the form of this rotational speed response is a system of first-order time lag. We formulate the gain and time constant for this rotational speed response. The magnitude of the gain is approximately three when the wind turbine is operated at optimal tip-speed ratio. We discuss the physical meaning of the derived time constant. (paper)

Isotopic variation in the Tuolumne Intrusive Suite, central Sierra Nevada, California

Science.gov (United States)

Kistler, R.W.; Chappell, B.W.; Peck, D.L.; Bateman, P.C.

1986-01-01

Granitoid rocks of the compositionally zoned Late Cretaceous Toulumne Intrusive Suite in the central Sierra Nevada, California, have initial87Sr/86Sr values (Sri) and143Nd/144Nd values (Ndi) that vary from 0.7057 to 0.7067 and from 0.51239 to 0.51211 respectively. The observed variation of both Sri and Ndi and of chemical composition in rocks of the suite cannot be due to crystal fractionation of magma solely under closed system conditons. The largest variation in chemistry, Ndi, and Sri is present in the outer-most equigranular units of the Tuolumne Intrusive Suite. Sri varies positively with SiO2, Na2O, K2O, and Rb concentrations, and negatively with Ndi, Al2O3, Fe2O3, MgO, FeO, CaO, MnO, P2O5, TiO2, and Sr concentrations. This covariation of Sri, Ndi and chemistry can be modeled by a process of simple mixing of basaltic and granitic magmas having weight percent SiO2 of 48.0 and 73.3 respectively. Isotopic characteristic of the mafic magma are Sri=0.7047, Ndi=0.51269 and ??18O=6.0, and of the felsic magma are Sri=0.7068, Ndi=0.51212 and ??18O=8.9. The rocks sampled contain from 50 to 80% of the felsic component. An aplite in the outer equigranular unit of the Tuolumne Intrusive Suite apparently was derived by fractional crystallization of plagioclase and hornblende from magma with granudiorite composition that was a product of mixing of the magmas described above. Siliceous magmas derived from the lower crust, having a maximum of 15 percent mantle-derived mafic component, are represented by the inner prophyritic units of the Tuolumne Intrusive Suite. ?? 1986 Springer-Verlag.

Testing local Lorentz and position invariance and variation of fundamental constants by searching the derivative of the comparison frequency between a cryogenic sapphire oscillator and hydrogen maser

International Nuclear Information System (INIS)

Tobar, Michael Edmund; Wolf, Peter; Bize, Sebastien; Santarelli, Giorgio; Flambaum, Victor

2010-01-01

The cryogenic sapphire oscillator at the Paris Observatory has been continuously compared to various hydrogen masers since 2001. The early data sets were used to test local Lorentz invariance in the Robertson-Mansouri-Sexl (RMS) framework by searching for sidereal modulations with respect to the cosmic microwave background, and represent the best Kennedy-Thorndike experiment to date. In this work, we present continuous operation over a period of greater than six years from September 2002 to December 2008 and present a more precise way to analyze the data by searching the time derivative of the comparison frequency. Because of the long-term operation we are able to search both sidereal and annual modulations. The results give P KT =β RMS -α RMS -1=-1.7(4.0)x10 -8 for the sidereal and -23(10)x10 -8 for the annual term, with a weighted mean of -4.8(3.7)x10 -8 , a factor of 8 better than previous. Also, we analyze the data with respect to a change in gravitational potential for both diurnal and annual variations. The result gives β H-Maser -β CSO =-2.7(1.4)x10 -4 for the annual and -6.9(4.0)x10 -4 for the diurnal terms, with a weighted mean of -3.2(1.3)x10 -4 . This result is 2 orders of magnitude better than other tests that use electromagnetic resonators. With respect to fundamental constants a limit can be provided on the variation with ambient gravitational potential and boost of a combination of the fine structure constant (α), the normalized quark mass (m q ), and the electron to proton mass ratio (m e /m p ), setting the first limit on boost dependence of order 10 -10 .

Multi-symplectic variational integrators for nonlinear Schrödinger equations with variable coefficients

International Nuclear Information System (INIS)

Liao Cui-Cui; Cui Jin-Chao; Liang Jiu-Zhen; Ding Xiao-Hua

2016-01-01

In this paper, we propose a variational integrator for nonlinear Schrödinger equations with variable coefficients. It is shown that our variational integrator is naturally multi-symplectic. The discrete multi-symplectic structure of the integrator is presented by a multi-symplectic form formula that can be derived from the discrete Lagrangian boundary function. As two examples of nonlinear Schrödinger equations with variable coefficients, cubic nonlinear Schrödinger equations and Gross–Pitaevskii equations are extensively studied by the proposed integrator. Our numerical simulations demonstrate that the integrator is capable of preserving the mass, momentum, and energy conservation during time evolutions. Convergence tests are presented to verify that our integrator has second-order accuracy both in time and space. (paper)

Epigenetic variation, inheritance, and parent-of-origin effects of cytosine methylation in maize (Zea mays).

Science.gov (United States)

Lauria, Massimiliano; Piccinini, Sara; Pirona, Raul; Lund, Gertrud; Viotti, Angelo; Motto, Mario

2014-03-01

Pure epigenetic variation, or epigenetic variation that is independent of genetic context, may provide a mechanism for phenotypic variation in the absence of DNA mutations. To estimate the extent of pure epigenetic variation within and across generations and to identify the DNA regions targeted, a group of eight plants derived from a highly inbred line of maize (Zea mays) was analyzed by the methylation-sensitive amplified polymorphism (MSAP) technique. We found that cytosine methylation (mC) differences among individuals accounted for up to 7.4% of CCGG sites investigated by MSAP. Of the differentially methylated fragments (DMFs) identified in the S0 generation, ∼12% were meiotically inherited for at least six generations. We show that meiotically heritable mC variation was consistently generated for an average of 0.5% CCGG sites per generation and that it largely occurred somatically. We provide evidence that mC variation can be established and inherited in a parent-of-origin manner, given that the paternal lineage is more prone to both forward and reverse mC changes. The molecular characterization of selected DMFs revealed that the variation was largely determined by CG methylation changes that map within gene regions. The expression analysis of genes overlapping with DMFs did not reveal an obvious correlation between mC variation and transcription, reinforcing the idea that the primary function of gene-body methylation is not to control gene expression. Because this study focuses on epigenetic variation in field-grown plants, the data presented herein pertain to spontaneous epigenetic changes of the maize genome in a natural context.

Comparison of earthquake source parameters and interseismic plate coupling variations in global subduction zones (Invited)

Science.gov (United States)

Bilek, S. L.; Moyer, P. A.; Stankova-Pursley, J.

2010-12-01

Geodetically determined interseismic coupling variations have been found in subduction zones worldwide. These coupling variations have been linked to heterogeneities in interplate fault frictional conditions. These connections to fault friction imply that observed coupling variations are also important in influencing details in earthquake rupture behavior. Because of the wealth of newly available geodetic models along many subduction zones, it is now possible to examine detailed variations in coupling and compare to seismicity characteristics. Here we use a large catalog of earthquake source time functions and slip models for moderate to large magnitude earthquakes to explore these connections, comparing earthquake source parameters with available models of geodetic coupling along segments of the Japan, Kurile, Kamchatka, Peru, Chile, and Alaska subduction zones. In addition, we use published geodetic results along the Costa Rica margin to compare with source parameters of small magnitude earthquakes recorded with an onshore-offshore network of seismometers. For the moderate to large magnitude earthquakes, preliminary results suggest a complex relationship between earthquake parameters and estimates of strongly and weakly coupled segments of the plate interface. For example, along the Kamchatka subduction zone, these earthquakes occur primarily along the transition between strong and weak coupling, with significant heterogeneity in the pattern of moment scaled duration with respect to the coupling estimates. The longest scaled duration event in this catalog occurred in a region of strong coupling. Earthquakes along the transition between strong and weakly coupled exhibited the most complexity in the source time functions. Use of small magnitude (0.5 earthquake spectra, with higher corner frequencies and higher mean apparent stress for earthquakes that occur in along the Osa Peninsula relative to the Nicoya Peninsula, mimicking the along-strike variations in

Variational principle for the Pareto power law.

Science.gov (United States)

Chakraborti, Anirban; Patriarca, Marco

2009-11-27

A mechanism is proposed for the appearance of power-law distributions in various complex systems. It is shown that in a conservative mechanical system composed of subsystems with different numbers of degrees of freedom a robust power-law tail can appear in the equilibrium distribution of energy as a result of certain superpositions of the canonical equilibrium energy densities of the subsystems. The derivation only uses a variational principle based on the Boltzmann entropy, without assumptions outside the framework of canonical equilibrium statistical mechanics. Two examples are discussed, free diffusion on a complex network and a kinetic model of wealth exchange. The mechanism is illustrated in the general case through an exactly solvable mechanical model of a dimensionally heterogeneous system.

Precision Orbit Derived Atmospheric Density: Development and Performance

Science.gov (United States)

McLaughlin, C.; Hiatt, A.; Lechtenberg, T.; Fattig, E.; Mehta, P.

2012-09-01

derived density estimates. However, major variations in density are observed in the POE derived densities. These POE derived densities in combination with other data sources can be assimilated into physics based general circulation models of the thermosphere and ionosphere with the possibility of providing improved density forecasts for satellite drag analysis. POE derived density estimates were initially developed using CHAMP and GRACE data so comparisons could be made with accelerometer derived density estimates. This paper presents the results of the most extensive calibration of POE derived densities compared to accelerometer derived densities and provides the reasoning for selecting certain parameters in the estimation process. The factors taken into account for these selections are the cross correlation and RMS performance compared to the accelerometer derived densities and the output of the ballistic coefficient estimation that occurs simultaneously with the density estimation. This paper also presents the complete data set of CHAMP and GRACE results and shows that the POE derived densities match the accelerometer densities better than empirical models or DCA. This paves the way to expand the POE derived densities to include other satellites with quality GPS and/or satellite laser ranging observations.

Multigrid solution of the Navier-Stokes equations at low speeds with large temperature variations

International Nuclear Information System (INIS)

Sockol, Peter M.

2003-01-01

Multigrid methods for the Navier-Stokes equations at low speeds and large temperature variations are investigated. The compressible equations with time-derivative preconditioning and preconditioned flux-difference splitting of the inviscid terms are used. Three implicit smoothers have been incorporated into a common multigrid procedure. Both full coarsening and semi-coarsening with directional fine-grid defect correction have been studied. The resulting methods have been tested on four 2D laminar problems over a range of Reynolds numbers on both uniform and highly stretched grids. Two of the three methods show efficient and robust performance over the entire range of conditions. In addition, none of the methods has any difficulty with the large temperature variations

On the variational principle for the equations of perfect fluid dynamics

International Nuclear Information System (INIS)

Serre, D.

1993-01-01

One gives a new version of the variational principle δL = 0, L being the usual Lagrangian, for the perfect fluid mechanics. It is formally equivalent to the well-known principle but it gives the first rigorous derivation of the conservation laws (momentum and energy), including the discontinuous case (shock waves, contact discontinuities). Thanks to a new formulation of the constraints, we do not involve any Lagrange multiplier, which in previous works were neither physically relevant, since they do not appear in the Euler equations, nor mathematically relevant. We even give a variational interpretation of the entropy inequality when shock waves occur. Our method covers all aspects of the perfect fluids, including stationary and unstationary motion, compressible and incompressible fluids, axisymmetric case. When the velocity field admits a stream function, the variational principle gives rise to extremal points of the Lagrangian on various infinite dimensional manifolds. For a suitable choice of this manifold, the flow is itself periodic, that is all the fluid particles have a periodic motion with the same period. The flow describes a closed geodesic on some group of diffeomorphisms. (author). 10 refs

Seasonal and Sexual Variation in Metabolism, Thermoregulation, and Hormones in the Big Brown Bat (Eptesicus fuscus).

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Richardson, Christopher S; Heeren, Tim; Kunz, Thomas H

In response to seasonal variation in energy availability and thermal environment, physiological and endocrine mechanisms have evolved in temperate zone animals. Seasonal changes in hormone activity affect metabolism, body temperature, and reproductive activity. We examined the seasonal regulatory role of hormones on basal metabolic rate (BMR) and regulatory nonshivering thermogenesis (RNST) in 98 female and 17 male adult Eptesicus fuscus (big brown bat). We measured BMR, RNST, and plasma levels of thyroid hormone (T 3 ), leptin, and cortisol in bats captured in maternity colonies in eastern Massachusetts from May to August (from arousal from the hibernation phase to the prehibernation phase). We hypothesized that all three hormones are seasonally primarily metabolic hormones and secondarily thermogenic hormones. In males, only BMR significantly changed seasonally. In females, all five variables significantly changed seasonally. The seasonal pattern of plasma leptin and cortisol levels correlated with the seasonal pattern of BMR, with an initial increase followed by a decrease, suggesting that leptin and cortisol are primarily metabolic hormones. The seasonal pattern of plasma T 3 levels generally paralleled the basic seasonal pattern of RNST, with both increasing at the second half of the season, suggesting that T 3 is primarily a thermogenic hormone. The observed decrease in plasma leptin levels may be necessary to allow for the observed seasonal decrease in BMR, with the similar cortisol pattern important for leptin regulation. While T 3 is needed to maintain BMR, it may play a more critical role in the seasonal regulation of RNST than of BMR.

Environmental Drivers of Benthic Flux Variation and Ecosystem Functioning in Salish Sea and Northeast Pacific Sediments.

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Rénald Belley

Full Text Available The upwelling of deep waters from the oxygen minimum zone in the Northeast Pacific from the continental slope to the shelf and into the Salish Sea during spring and summer offers a unique opportunity to study ecosystem functioning in the form of benthic fluxes along natural gradients. Using the ROV ROPOS we collected sediment cores from 10 sites in May and July 2011, and September 2013 to perform shipboard incubations and flux measurements. Specifically, we measured benthic fluxes of oxygen and nutrients to evaluate potential environmental drivers of benthic flux variation and ecosystem functioning along natural gradients of temperature and bottom water dissolved oxygen concentrations. The range of temperature and dissolved oxygen encountered across our study sites allowed us to apply a suite of multivariate analyses rarely used in flux studies to identify bottom water temperature as the primary environmental driver of benthic flux variation and organic matter remineralization. Redundancy analysis revealed that bottom water characteristics (temperature and dissolved oxygen, quality of organic matter (chl a:phaeo and C:N ratios and sediment characteristics (mean grain size and porosity explained 51.5% of benthic flux variation. Multivariate analyses identified significant spatial and temporal variation in benthic fluxes, demonstrating key differences between the Northeast Pacific and Salish Sea. Moreover, Northeast Pacific slope fluxes were generally lower than shelf fluxes. Spatial and temporal variation in benthic fluxes in the Salish Sea were driven primarily by differences in temperature and quality of organic matter on the seafloor following phytoplankton blooms. These results demonstrate the utility of multivariate approaches in differentiating among potential drivers of seafloor ecosystem functioning, and indicate that current and future predictive models of organic matter remineralization and ecosystem functioning of soft-muddy shelf and

Anatomical variations within the deep posterior compartment of the leg and important clinical consequences.

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Hislop, M; Tierney, P

2004-09-01

The management of musculoskeletal conditions makes up a large part of a sports medicine practitioner's practice. A thorough knowledge of anatomy is an essential component of the armament necessary to decipher the large number of potential conditions that may confront these practitioners. To cloud the issue further, anatomical variations may be present, such as supernumerary muscles, thickened fascial bands or variant courses of nerves and blood vessels, which can themselves manifest as acute or chronic conditions that lead to significant morbidity or limitation of activity. There are a number of contentious areas within the literature surrounding the anatomy of the leg, particularly involving the deep posterior compartment. Conditions such as chronic exertional compartment syndrome, tibial periostitis (shin splints), peripheral nerve entrapment and tarsal tunnel syndrome may all be affected by subtle anatomical variations. This paper primarily focuses on the deep posterior compartment of the leg and uses the gross dissection of cadaveric specimens to describe definitively the anatomy of the deep posterior compartment. Variant fascial attachments of flexor digitorum longus are documented and potential clinical sequelae such as chronic exertional compartment syndrome and tarsal tunnel syndrome are discussed.

Population-genetic properties of differentiated copy number variations in cattle.

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Xu, Lingyang; Hou, Yali; Bickhart, Derek M; Zhou, Yang; Hay, El Hamidi Abdel; Song, Jiuzhou; Sonstegard, Tad S; Van Tassell, Curtis P; Liu, George E

2016-03-23

While single nucleotide polymorphism (SNP) is typically the variant of choice for population genetics, copy number variation (CNV) which comprises insertion, deletion and duplication of genomic sequence, is an informative type of genetic variation. CNVs have been shown to be both common in mammals and important for understanding the relationship between genotype and phenotype. However, CNV differentiation, selection and its population genetic properties are not well understood across diverse populations. We performed a population genetics survey based on CNVs derived from the BovineHD SNP array data of eight distinct cattle breeds. We generated high resolution results that show geographical patterns of variations and genome-wide admixture proportions within and among breeds. Similar to the previous SNP-based studies, our CNV-based results displayed a strong correlation of population structure and geographical location. By conducting three pairwise comparisons among European taurine, African taurine, and indicine groups, we further identified 78 unique CNV regions that were highly differentiated, some of which might be due to selection. These CNV regions overlapped with genes involved in traits related to parasite resistance, immunity response, body size, fertility, and milk production. Our results characterize CNV diversity among cattle populations and provide a list of lineage-differentiated CNVs.

Variation of haemoglobin extinction coefficients can cause errors in the determination of haemoglobin concentration measured by near-infrared spectroscopy

Energy Technology Data Exchange (ETDEWEB)

Kim, J G; Liu, H [Joint Graduate Program in Biomedical Engineering, University of Texas at Arlington/University of Texas Southwestern Medical Center at Dallas, Arlington, TX 76019 (United States)

2007-10-21

Near-infrared spectroscopy or imaging has been extensively applied to various biomedical applications since it can detect the concentrations of oxyhaemoglobin (HbO{sub 2}), deoxyhaemoglobin (Hb) and total haemoglobin (Hb{sub total}) from deep tissues. To quantify concentrations of these haemoglobin derivatives, the extinction coefficient values of HbO{sub 2} and Hb have to be employed. However, it was not well recognized among researchers that small differences in extinction coefficients could cause significant errors in quantifying the concentrations of haemoglobin derivatives. In this study, we derived equations to estimate errors of haemoglobin derivatives caused by the variation of haemoglobin extinction coefficients. To prove our error analysis, we performed experiments using liquid-tissue phantoms containing 1% Intralipid in a phosphate-buffered saline solution. The gas intervention of pure oxygen was given in the solution to examine the oxygenation changes in the phantom, and 3 mL of human blood was added twice to show the changes in [Hb{sub total}]. The error calculation has shown that even a small variation (0.01 cm{sup -1} mM{sup -1}) in extinction coefficients can produce appreciable relative errors in quantification of {delta}[HbO{sub 2}], {delta}[Hb] and {delta}[Hb{sub total}]. We have also observed that the error of {delta}[Hb{sub total}] is not always larger than those of {delta}[HbO{sub 2}] and {delta}[Hb]. This study concludes that we need to be aware of any variation in haemoglobin extinction coefficients, which could result from changes in temperature, and to utilize corresponding animal's haemoglobin extinction coefficients for the animal experiments, in order to obtain more accurate values of {delta}[HbO{sub 2}], {delta}[Hb] and {delta}[Hb{sub total}] from in vivo tissue measurements.

GAPTrap: A Simple Expression System for Pluripotent Stem Cells and Their Derivatives

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Tim Kao

2016-09-01

Full Text Available The ability to reliably express fluorescent reporters or other genes of interest is important for using human pluripotent stem cells (hPSCs as a platform for investigating cell fates and gene function. We describe a simple expression system, designated GAPTrap (GT, in which reporter genes, including GFP, mCherry, mTagBFP2, luc2, Gluc, and lacZ are inserted into the GAPDH locus in hPSCs. Independent clones harboring variations of the GT vectors expressed remarkably consistent levels of the reporter gene. Differentiation experiments showed that reporter expression was reliably maintained in hematopoietic cells, cardiac mesoderm, definitive endoderm, and ventral midbrain dopaminergic neurons. Similarly, analysis of teratomas derived from GT-lacZ hPSCs showed that β-galactosidase expression was maintained in a spectrum of cell types representing derivatives of the three germ layers. Thus, the GAPTrap vectors represent a robust and straightforward tagging system that enables indelible labeling of PSCs and their differentiated derivatives.

Trustworthy Variant Derivation with Translation Validation for Safety Critical Product Lines

DEFF Research Database (Denmark)

Iosif-Lazăr, Alexandru Florin; Wasowski, Andrzej

2016-01-01

Software product line (SPL) engineering facilitates development of entire families of software products with systematic reuse. Model driven SPLs use models in the design and development process. In the safety critical domain, validation of models and testing of code increases the quality...... of the products altogether. However, to maintain this trustworthiness it is necessary to know that the SPL tools, which manipulate models and code to derive concrete product variants, do not introduce errors in the process. We propose a general technique of checking correctness of product derivation tools through...... translation validation. We demonstrate it using Featherweight VML—a core language for separate variability modeling relying on a single kind of variation point to define transformations of artifacts seen as object models. We use Featherweight VML with its semantics as a correctness specification...

Lake transparency: a window into decadal variations in dissolved organic carbon concentrations in Lakes of Acadia National Park, Maine

Science.gov (United States)

Roesler, Collin S.; Culbertson, Charles W.

2016-01-01

A forty year time series of Secchi depth observations from approximately 25 lakes in Acadia National Park, Maine, USA, evidences large variations in transparency between lakes but relatively little seasonal cycle within lakes. However, there are coherent patterns over the time series, suggesting large scale processes are responsible. It has been suggested that variations in colored dissolved organic matter (CDOM) are primarily responsible for the variations in transparency, both between lakes and over time and further that CDOM is a robust optical proxy for dissolved organic carbon (DOC). Here we present a forward model of Secchi depth as a function of DOC based upon first principles and bio-optical relationships. Inverting the model to estimate DOC concentration from Secchi depth observations compared well with the measured DOC concentrations collected since 1995 (RMS error < 1.3 mg C l-1). This inverse model allows the time series of DOC to be extended back to the mid 1970s when only Secchi depth observations were collected, and thus provides a means for investigating lake response to climate forcing, changing atmospheric chemistry and watershed characteristics, including land cover and land use.

Spatial variation of mercury levels in nesting Bonelli's eagles from Southwest Portugal: effects of diet composition and prey contamination

International Nuclear Information System (INIS)

Palma, Luis; Beja, Pedro; Tavares, Paula C.; Monteiro, Luis R.

2005-01-01

Mercury (Hg) was determined in adult Bonelli's eagles (Hieraaetus fasciatus) and their avian prey, from samples of feathers collected between 1992 and 2001 at the nesting sites of 21 pairs in Southwest Portugal. Eagle Hg levels showed great variation, reflecting primarily differences in diet composition and food chain biomagnification. Concentrations were positively correlated with the dietary proportion of insectivorous and omnivorous birds (e.g. egrets, corvids and thrushes), with very low levels for pairs feeding mainly on herbivores (e.g. rabbits, pigeons and partridges). Differences in prey contamination among breeding territories added to dietary effects in determining variation of Hg levels in eagles, shaping a spatial pattern that was largely consistent with a source of contamination in a coal-burning power-plant lying upwind of the study area. Despite this presumed contamination, Hg levels seemed to be of little concern to this eagle population, though there might be subtle deleterious effects on the reproductive output of a few pairs. This study emphasizes the need to account for dietary effects when biomonitoring Hg contamination using birds of prey. - The effects of diet composition and prey contamination added up to determine the spatial variation of Hg levels in breeding Bonelli's eagles

Morphological variation in leaf dissection of Rheum palmatum complex (Polygonaceae.

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Xu-Mei Wang

Full Text Available AIMS: Rheum palmatum complex comprises all taxa within section Palmata in the genus Rheum, including R. officinale, R. palmatum, R. tanguticum, R. tanguticum var. liupanshanense and R. laciniatum. The identification of the taxa in section Palmata is based primarily on the degree of leaf blade dissection and the shape of the lobes; however, difficulties in species identification may arise from their significant variation. The aim of this study is to analyze the patterns of variation in leaf blade characteristics within and among populations through population-based sampling covering the entire distribution range of R. palmatum complex. METHODS: Samples were taken from 2340 leaves from 780 individuals and 44 populations representing the four species, and the degree of leaf blade dissection and the shape of the lobe were measured to yield a set of quantitative data. Furthermore, those data were statistically analyzed. IMPORTANT FINDINGS: The statistical analysis showed that the degree of leaf blade dissection is continuous from lobed to parted, and the shape of the lobe is also continuous from broadly triangular to lanceolate both within and between populations. We suggested that taxa in section Palmata should be considered as one species. Based on the research on the R. palmatum complex, we considered that the quantitative characteristics were greatly influenced by the environment. Therefore, it is not reliable to delimitate the species according to the continuously quantitative vegetative characteristics.

Balance Systems and the Variational Bicomplex

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Serge Preston

2011-07-01

Full Text Available In this work we show that the systems of balance equations (balance systems of continuum thermodynamics occupy a natural place in the variational bicomplex formalism. We apply the vertical homotopy decomposition to get a local splitting (in a convenient domain of a general balance system as the sum of a Lagrangian part and a complemental ''pure non-Lagrangian'' balance system. In the case when derivatives of the dynamical fields do not enter the constitutive relations of the balance system, the ''pure non-Lagrangian'' systems coincide with the systems introduced by S. Godunov [Soviet Math. Dokl. 2 (1961, 947-948] and, later, asserted as the canonical hyperbolic form of balance systems in [Müller I., Ruggeri T., Rational extended thermodynamics, 2nd ed., Springer Tracts in Natural Philosophy, Vol. 37, Springer-Verlag, New York, 1998].

Within-species patterns challenge our understanding of the causes and consequences of trait variation with implications for trait-based models

Science.gov (United States)