WorldWideScience

Sample records for upwelling season r2

  1. (abstract) Seasonal Variability in Coastal Upwelling: A Comparison of Four Coastal Upwelling Sites from Space

    Science.gov (United States)

    Carr, Mary-Elena

    1996-01-01

    Coastal upwelling of subsurface nutrient-rich water occurs along the eastern boundary of the ocean basins and leads to high primary production and fish catches. In this study satellite observations are used to compare the seasonal cycle in wind forcing and in the oceanic and biological response of the major coastal upwelling regions associated with the Canary, Benguela, California, and Humboldt Currents.

  2. Coastal upwelling seasonality and variability of temperature and chlorophyll in a small coastal embayment

    Science.gov (United States)

    Walter, Ryan K.; Armenta, Kevin J.; Shearer, Brandon; Robbins, Ian; Steinbeck, John

    2018-02-01

    While the seasonality of wind-driven coastal upwelling in eastern boundary upwelling systems has long been established, many studies describe two distinct seasons (upwelling and non-upwelling), a generalized framework that does not capture details relevant to marine ecosystems. In this contribution, we present a more detailed description of the annual cycle and upwelling seasonality for an understudied location along the central California coast. Using both the mean monthly upwelling favorable wind stress and the monthly standard deviation, we define the following seasons (contiguous months) and a transitional period (non-contiguous months): "Winter Storms" season (Dec-Jan-Feb), "Upwelling Transition" period (Mar and Jun), "Peak Upwelling" season (Apr-May), "Upwelling Relaxation" season (Jul-Aug-Sep), and "Winter Transition" season (Oct-Nov). In order to describe the oceanic response to this upwelling wind seasonality, we take advantage of nearly a decade of full water-column measurements of temperature and chlorophyll made using an automated profiling system at the end of the California Polytechnic State University Pier in San Luis Obispo Bay, a small ( 2 km wide near study site) and shallow ( 10 m average bay depth) coastal embayment. Variability and average-year patterns are described inside the bay during the various upwelling seasons. Moreover, the role of the local coastline orientation and topography on bay dynamics is also assessed using long-term measurements collected outside of the bay. The formation of a seasonally variable upwelling shadow system and potential nearshore retention zone is discussed. The observations presented provide a framework on which to study interannual changes to the average-year seasonal cycle, assess the contribution of higher-frequency features to nearshore variability, and better predict dynamically and ecologically important events.

  3. Seasonal and annual variability of coastal sulphur plumes in the northern Benguela upwelling system.

    Science.gov (United States)

    Ohde, Thomas; Dadou, Isabelle

    2018-01-01

    We investigated the seasonal and annual variability of surface sulphur plumes in the northern Benguela upwelling system off Namibia because of their significant impacts on the marine ecosystem, fishing industry, aquaculture farming and tourism due to their toxic properties. We identified the sulphur plumes in ocean colour satellite data of the medium resolution imaging spectrometer (MERIS) for the 2002-2012 time period using the differences in the spectral properties of Namibian Benguela optical water types. The sulphur events have a strong seasonal cycle with pronounced main and off-seasons forced by local and remote-driven processes. The main peak season is in late austral summer and early austral autumn at the beginning of the annual upwelling cycle caused by increasing equatorwards alongshore winds. The sulphur plume activity is high between February and April during the seasonal oxygen minimum associated with the seasonal reduction of cross-shore ventilation of the bottom waters, the seasonal southernmost position of the Angola Benguela Frontal Zone, the seasonal maximum of water mass fractions of South Atlantic and Angola Gyre Central Waters as well as the seasonal arrival of the downwelling coastal trapped waves. The off-season is in austral spring and early austral summer during increased upwelling intensity and enhanced oxygen supply. The annual variability of sulphur events is characterized by very high activities in years 2004, 2005 and 2010 interrupted by periods of lower activity in years 2002 to 2003, 2006 to 2009 and 2011 to 2012. This result can be explained by the relative contributions or adding effects of local and remote-driven forces (from the equatorial area). The probability for the occurrence of sulphur plumes is enhanced in years with a lower annual mean of upwelling intensity, decreased oxygen supply associated with decreased lateral ventilation of bottom waters, more southern position of the Angola Benguela Frontal Zone, increased mass

  4. Seasonal and annual variability of coastal sulphur plumes in the northern Benguela upwelling system.

    Directory of Open Access Journals (Sweden)

    Thomas Ohde

    Full Text Available We investigated the seasonal and annual variability of surface sulphur plumes in the northern Benguela upwelling system off Namibia because of their significant impacts on the marine ecosystem, fishing industry, aquaculture farming and tourism due to their toxic properties. We identified the sulphur plumes in ocean colour satellite data of the medium resolution imaging spectrometer (MERIS for the 2002-2012 time period using the differences in the spectral properties of Namibian Benguela optical water types. The sulphur events have a strong seasonal cycle with pronounced main and off-seasons forced by local and remote-driven processes. The main peak season is in late austral summer and early austral autumn at the beginning of the annual upwelling cycle caused by increasing equatorwards alongshore winds. The sulphur plume activity is high between February and April during the seasonal oxygen minimum associated with the seasonal reduction of cross-shore ventilation of the bottom waters, the seasonal southernmost position of the Angola Benguela Frontal Zone, the seasonal maximum of water mass fractions of South Atlantic and Angola Gyre Central Waters as well as the seasonal arrival of the downwelling coastal trapped waves. The off-season is in austral spring and early austral summer during increased upwelling intensity and enhanced oxygen supply. The annual variability of sulphur events is characterized by very high activities in years 2004, 2005 and 2010 interrupted by periods of lower activity in years 2002 to 2003, 2006 to 2009 and 2011 to 2012. This result can be explained by the relative contributions or adding effects of local and remote-driven forces (from the equatorial area. The probability for the occurrence of sulphur plumes is enhanced in years with a lower annual mean of upwelling intensity, decreased oxygen supply associated with decreased lateral ventilation of bottom waters, more southern position of the Angola Benguela Frontal Zone

  5. Seasonal climatology of hydrographic conditions in the upwelling region off northern Chile

    Science.gov (United States)

    Blanco, J. L.; Thomas, A. C.; Carr, M.-E.; Strub, P. T.

    2001-06-01

    Over 30 years of hydrographic data from the northern Chile (18°S-24°S) upwelling region are used to calculate the surface and subsurface seasonal climatology extending 400 km offshore. The data are interpolated to a grid with sufficient spatial resolution to preserve cross-shelf gradients and then presented as means within four seasons: austral winter (July-September), spring (October-December), summer (January-March), and fall (April-June). Climatological monthly wind forcing, surface temperature, and sea level from three coastal stations indicate equatorward (upwelling favorable) winds throughout the year, weakest in the north. Seasonal maximum alongshore wind stress is in late spring and summer (December-March). Major water masses of the region are identified in climatological T-S plots and their sources and implied circulation discussed. Surface fields and vertical transects of temperature and salinity confirm that upwelling occurs year-round, strongest in summer and weakest in winter, bringing relatively fresh water to the surface nearshore. Surface geostrophic flow nearshore is equatorward throughout the year. During summer, an anticyclonic circulation feature in the north which extends to at least 200 m depth is evident in geopotential anomaly and in both temperature and geopotential variance fields. Subsurface fields indicate generally poleward flow throughout the year, strongest in an undercurrent near the coast. This undercurrent is strongest in summer and most persistent and organized in the south (south of 21°S). A subsurface oxygen minimum, centered at ˜250 m, is strongest at lower latitudes. Low-salinity subsurface water intrudes into the study area near 100 m, predominantly in offshore regions, strongest during summer and fall and in the southernmost portion of the region. The climatological fields are compared to features off Baja within the somewhat analogous California Current and to measurements from higher latitudes within the Chile

  6. Seasonal and inter-annual variation of mesozooplankton in the coastal upwelling zone off central-southern Chile

    Science.gov (United States)

    Escribano, Ruben; Hidalgo, Pamela; González, Humberto; Giesecke, Ricardo; Riquelme-Bugueño, Ramiro; Manríquez, Karen

    2007-11-01

    Zooplankton sampling at Station 18 off Concepción (36°30‧S and 73°07‧W), on an average frequency of 30 days (August 2002 to December 2005), allowed the assessment of seasonal and inter-annual variation in zooplankton biomass, its C and N content, and the community structure in relation to upwelling variability. Copepods contributed 79% of the total zooplankton community and were mostly represented by Paracalanus parvus, Oithona similis, Oithona nana, Calanus chilensis, and Rhincalanus nasutus. Other copepod species, euphausiids (mainly Euphausia mucronata), gelatinous zooplankton, and crustacean larvae comprised the rest of the community. Changes in the depth of the upper boundary of the oxygen minimum zone indicated the strongly seasonal upwelling pattern. The bulk of zooplankton biomass and total copepod abundance were both strongly and positively associated with a shallow (oxygen minimum zone; these values increased in spring/summer, when upwelling prevailed. Gelatinous zooplankton showed positive abundance anomalies in the spring and winter, whereas euphausiids had no seasonal pattern and a positive anomaly in the fall. The C content and the C/N ratio of zooplankton biomass significantly increased during the spring when chlorophyll- a was high (>5 mg m -3). No major changes in zooplankton biomass and species were found from one year to the next. We concluded that upwelling is the key process modulating variability in zooplankton biomass and its community structure in this zone. The spring/summer increase in zooplankton may be largely the result of the aggregation of dominant copepods within the upwelling region; these may reproduce throughout the year, increasing their C content and C/N ratios given high diatom concentrations.

  7. Long-time observation of annual variation of Taiwan Strait upwelling in summer season

    Science.gov (United States)

    Tang, D. L.; Kawamura, H.; Guan, L.

    The Taiwan Strait is between Taiwan Island and Mainland China, where several upwelling zones are well known for good fishing grounds. Earlier studies in the strait have been conducted on detecting upwelling by ship measurements with short-term cruises, but long-term variations of upwelling in this region are not understood. The present paper examines satellite images for a long-time observation of two major upwelling zones in the Taiwan Strait: Taiwan Bank Upwelling (TBU) and Dongshan Upwelling (DSU). Sea surface temperature (SST) and chlorophyll a (Chl-a) images have been analyzed for summer months (June, July, and August) from 1980 to 2002. Results reveal annual variation of two upwelling zones. These two upwelling zones occur every year characterized with distinct low water temperature and high Chl-a concentrations. During the period from 1989 to 1998, SST is found to be 1.15 °C lower in TBU, and 1.42 °C lower in the DSU than the Taiwan Strait. The size of DSU has been found to be larger during summer of 1989, 1990, 1993 and 1995; TBU has been found to be weak during summer of 1994 and 1997. Ocean color images obtained from CZCS, OCI, and SeaWiFS also show high Chl-a concentrations (0.8-2.5 mg m-3) in two upwelling zones, which coincide with low SST in terms of location, shape, and time. These high Chl-a concentrations in TBU and DSU may be related to upwelling waters that bring nutrients from bottom to surface. The present results also show the potential of using satellite data for monitoring of ocean environment for long time period.

  8. Bleaching Susceptibility and Recovery of Colombian Caribbean Corals in Response to Water Current Exposure and Seasonal Upwelling

    OpenAIRE

    Bayraktarov, Elisa; Pizarro, Valeria; Eidens, Corvin; Wilke, Thomas; Wild, Christian

    2013-01-01

    Coral bleaching events are globally occurring more frequently and with higher intensity, mainly caused by increases in seawater temperature. In Tayrona National Natural Park (TNNP) in the Colombian Caribbean, local coral communities are subjected to seasonal wind-triggered upwelling events coinciding with stronger water currents depending on location. This natural phenomenon offers the unique opportunity to study potential water current-induced mitigation mechanisms of coral bleaching in an u...

  9. Bleaching Susceptibility and Recovery of Colombian Caribbean Corals in Response to Water Current Exposure and Seasonal Upwelling

    Science.gov (United States)

    Bayraktarov, Elisa; Pizarro, Valeria; Eidens, Corvin; Wilke, Thomas; Wild, Christian

    2013-01-01

    Coral bleaching events are globally occurring more frequently and with higher intensity, mainly caused by increases in seawater temperature. In Tayrona National Natural Park (TNNP) in the Colombian Caribbean, local coral communities are subjected to seasonal wind-triggered upwelling events coinciding with stronger water currents depending on location. This natural phenomenon offers the unique opportunity to study potential water current-induced mitigation mechanisms of coral bleaching in an upwelling influenced region. Therefore, coral bleaching susceptibility and recovery patterns were compared during a moderate and a mild bleaching event in December 2010 and 2011, and at the end of the subsequent upwelling periods at a water current-exposed and -sheltered site of an exemplary bay using permanent transect and labeling tools. This was accompanied by parallel monitoring of key environmental variables. Findings revealed that in 2010 overall coral bleaching before upwelling was significantly higher at the sheltered (34%) compared to the exposed site (8%). Whereas 97% of all previously bleached corals at the water current-exposed site had recovered from bleaching by April 2011, only 77% recovered at the sheltered site, but 12% had died there. In December 2011, only mild bleaching (bleaching. This indicates the existence of local resilience patterns against coral bleaching in Caribbean reefs. PMID:24282551

  10. Observed anomalous upwelling in the Lakshadweep Sea during the summer monsoon season of 2005

    Digital Repository Service at National Institute of Oceanography (India)

    Gopalakrishna, V.V.; Rao, R.R.; Nisha, K.; GirishKumar, M.S.; Pankajakshan, T.; Ravichandran, M.; Johnson, Z.; Girish, K.; Aneeshkumar, N.; Srinath, M.; Rajesh, S.; Rajan, C.K.

    of local and remote forcings are examined to explain the observed anomalous upwelling during SMS of 2005. The equatorward alongshore wind stress (WS) along the KK XBT transect persisted in a transient manner beyond September only during SMS of 2005...

  11. Bleaching susceptibility and recovery of Colombian Caribbean corals in response to water current exposure and seasonal upwelling.

    Science.gov (United States)

    Bayraktarov, Elisa; Pizarro, Valeria; Eidens, Corvin; Wilke, Thomas; Wild, Christian

    2013-01-01

    Coral bleaching events are globally occurring more frequently and with higher intensity, mainly caused by increases in seawater temperature. In Tayrona National Natural Park (TNNP) in the Colombian Caribbean, local coral communities are subjected to seasonal wind-triggered upwelling events coinciding with stronger water currents depending on location. This natural phenomenon offers the unique opportunity to study potential water current-induced mitigation mechanisms of coral bleaching in an upwelling influenced region. Therefore, coral bleaching susceptibility and recovery patterns were compared during a moderate and a mild bleaching event in December 2010 and 2011, and at the end of the subsequent upwelling periods at a water current-exposed and -sheltered site of an exemplary bay using permanent transect and labeling tools. This was accompanied by parallel monitoring of key environmental variables. Findings revealed that in 2010 overall coral bleaching before upwelling was significantly higher at the sheltered (34%) compared to the exposed site (8%). Whereas 97% of all previously bleached corals at the water current-exposed site had recovered from bleaching by April 2011, only 77% recovered at the sheltered site, but 12% had died there. In December 2011, only mild bleaching (corals recovered significantly at both sites in the course of upwelling. No differences in water temperatures between sites occurred, but water current exposure and turbidity were significantly higher at the exposed site, suggesting that these variables may be responsible for the observed site-specific mitigation of coral bleaching. This indicates the existence of local resilience patterns against coral bleaching in Caribbean reefs.

  12. Bleaching susceptibility and recovery of Colombian Caribbean corals in response to water current exposure and seasonal upwelling.

    Directory of Open Access Journals (Sweden)

    Elisa Bayraktarov

    Full Text Available Coral bleaching events are globally occurring more frequently and with higher intensity, mainly caused by increases in seawater temperature. In Tayrona National Natural Park (TNNP in the Colombian Caribbean, local coral communities are subjected to seasonal wind-triggered upwelling events coinciding with stronger water currents depending on location. This natural phenomenon offers the unique opportunity to study potential water current-induced mitigation mechanisms of coral bleaching in an upwelling influenced region. Therefore, coral bleaching susceptibility and recovery patterns were compared during a moderate and a mild bleaching event in December 2010 and 2011, and at the end of the subsequent upwelling periods at a water current-exposed and -sheltered site of an exemplary bay using permanent transect and labeling tools. This was accompanied by parallel monitoring of key environmental variables. Findings revealed that in 2010 overall coral bleaching before upwelling was significantly higher at the sheltered (34% compared to the exposed site (8%. Whereas 97% of all previously bleached corals at the water current-exposed site had recovered from bleaching by April 2011, only 77% recovered at the sheltered site, but 12% had died there. In December 2011, only mild bleaching (<10% at both sites was observed, but corals recovered significantly at both sites in the course of upwelling. No differences in water temperatures between sites occurred, but water current exposure and turbidity were significantly higher at the exposed site, suggesting that these variables may be responsible for the observed site-specific mitigation of coral bleaching. This indicates the existence of local resilience patterns against coral bleaching in Caribbean reefs.

  13. Oceanographic features of the upwelling in front of Gaira's intent Magdalena Department, minor dry season of 2006

    International Nuclear Information System (INIS)

    Arevalo Martinez, Damian Leonardo; Franco Herrera, Andres

    2008-01-01

    In order to determine the influence of the ocean and atmospheric coupling dynamics on upwelling events, caused by Ekman's transport and by continental winds, as well as the possible fertilization effect produced by the increasing of the concentration of inorganic nutrients in coastal waters of Gaira's inlet, Magdalena department, during the minor dry season of 2006, atmospheric, oceanographic, and biological variables were measured by the implementation of the Eurelian method. A total of four samplings were carried out, among which two presented atmospheric and oceanic conditions that evidence the occurrence of upwelling events 48 hours before in response to strong winds coming from northeast (trade winds) and from the continent, whereas the other two samplings presented similar characteristics to those typical of rainy seasons. During this study, wind velocity and direction presented expected values during upwelling events caused by Ekman's transport and by continental winds (≥ 4.5 m/s, 26 Celsius degrade and 120 Celsius degrade, respectively), generating enough stress levels in the sea surface layer that could move it offshore (1.2 dynes/cm 2 ). During the days following the upwelling events, anomalies in water physical and chemical characteristics were observed, presenting low temperatures (26.1 +- 1.1 Celsius degrade), high salinity (36.0 +- 0.5) and, as a consequence, high densities (δ 26.31 +- 0.50), as well as low dissolved oxygen levels (4.04 +- 0.29 mL/L) and predominant subsaturation (84.3 +- 6.1 %) Inorganic nutrient concentration showed a relatively homogeneous behavior, keeping low nitrite (0.35 +- 0.02 μM) and phosphate (0.30 +- 0.01 μM) levels during all samplings, whereas the mean ammonium concentration was relatively high (1.08 +- 0.11 μM). In contrast, nitrate levels were high during all samplings, with higher values corresponding to upwelling events (9.48 +- 0.49 μM), although variation was not statistically significative. Phytoplanktonic

  14. Phytoplankton dynamics in relation to seasonal variability and upwelling and relaxation patterns at the mouth of Ria de Aveiro (West Iberian Margin over a four-year period.

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    Tânia Vidal

    Full Text Available From June 2004 to December 2007, samples were weekly collected at a fixed station located at the mouth of Ria de Aveiro (West Iberian Margin. We examined the seasonal and inter-annual fluctuations in composition and community structure of the phytoplankton in relation to the main environmental drivers and assessed the influence of the oceanographic regime, namely changes in frequency and intensity of upwelling events, over the dynamics of the phytoplankton assemblage. The samples were consistently handled and a final subset of 136 OTUs (taxa with relative abundance > 0.01% was subsequently submitted to various multivariate analyses. The phytoplankton assemblage showed significant changes at all temporal scales but with an overriding importance of seasonality over longer- (inter-annual or shorter-term fluctuations (upwelling-related. Sea-surface temperature, salinity and maximum upwelling index were retrieved as the main driver of seasonal change. Seasonal signal was most evident in the fluctuations of chlorophyll a concentration and in the high turnover from the winter to spring phytoplankton assemblage. The seasonal cycle of production and succession was disturbed by upwelling events known to disrupt thermal stratification and induce changes in the phytoplankton assemblage. Our results indicate that both the frequency and intensity of physical forcing were important drivers of such variability, but the outcome in terms of species composition was highly dependent on the available local pool of species and the timing of those events in relation to the seasonal cycle. We conclude that duration, frequency and intensity of upwelling events, which vary seasonally and inter-annually, are paramount for maintaining long-term phytoplankton diversity likely by allowing unstable coexistence and incorporating species turnover at different scales. Our results contribute to the understanding of the complex mechanisms of coastal phytoplankton dynamics in

  15. Influence of Seasonal Food Availability on the Dynamics of Seabird Feeding Flocks at a Coastal Upwelling Area.

    Science.gov (United States)

    Anguita, Cristóbal; Simeone, Alejandro

    2015-01-01

    The formation of multi-species feeding flocks (MSFFs) through visual recruitment is considered an important strategy for obtaining food in seabirds and its functionality has been ascribed to enhanced foraging efficiency. Its use has been demonstrated in much of the world's oceans and includes numerous species. However, there is scant information on the temporal stability of the composition and abundance of MSFFs as well as the effect of seasonal food availability on their dynamics. Between July 2006 and September 2014, we conducted monthly at-sea seabird counts at Valparaiso Bay (32°56' to 33°01'S, 71°36' to 71°46'W) within the area of influence of the Humboldt Current in central Chile. This area is characterized by a marked seasonality in primary and secondary production associated with upwelling, mainly during austral spring-summer. Based on studies that provide evidence that flocking is most frequent when food is both scarce and patchy, we hypothesized that seabird MSFF attributes (i.e. frequency of occurrence, abundance and composition) will be modified according to the seasonal availability of food. Using generalized linear models (GLMs), our results show that the contrasting seasonality in food availability of the study area (using chlorophyll-a concentration as a proxy) had no significant influence on MSFF attributes, sparsely explaining their variations (P>0.05). Rather than seasonal food availability, the observed pattern for MSFF attributes at Valparaiso Bay suggests a substantial influence of reproductive and migratory (boreal and austral migrants) habits of birds that modulates MSFF dynamics consistently throughout the whole year in this highly variable and patchy environment. We highlight the importance of visual recruitment as a mechanism by which migratory and resident birds interact. This would allow them to reduce resource unpredictability, which in turn has a major impact on structuring seabird's MSFF dynamics.

  16. Influence of Seasonal Food Availability on the Dynamics of Seabird Feeding Flocks at a Coastal Upwelling Area.

    Directory of Open Access Journals (Sweden)

    Cristóbal Anguita

    Full Text Available The formation of multi-species feeding flocks (MSFFs through visual recruitment is considered an important strategy for obtaining food in seabirds and its functionality has been ascribed to enhanced foraging efficiency. Its use has been demonstrated in much of the world's oceans and includes numerous species. However, there is scant information on the temporal stability of the composition and abundance of MSFFs as well as the effect of seasonal food availability on their dynamics. Between July 2006 and September 2014, we conducted monthly at-sea seabird counts at Valparaiso Bay (32°56' to 33°01'S, 71°36' to 71°46'W within the area of influence of the Humboldt Current in central Chile. This area is characterized by a marked seasonality in primary and secondary production associated with upwelling, mainly during austral spring-summer. Based on studies that provide evidence that flocking is most frequent when food is both scarce and patchy, we hypothesized that seabird MSFF attributes (i.e. frequency of occurrence, abundance and composition will be modified according to the seasonal availability of food. Using generalized linear models (GLMs, our results show that the contrasting seasonality in food availability of the study area (using chlorophyll-a concentration as a proxy had no significant influence on MSFF attributes, sparsely explaining their variations (P>0.05. Rather than seasonal food availability, the observed pattern for MSFF attributes at Valparaiso Bay suggests a substantial influence of reproductive and migratory (boreal and austral migrants habits of birds that modulates MSFF dynamics consistently throughout the whole year in this highly variable and patchy environment. We highlight the importance of visual recruitment as a mechanism by which migratory and resident birds interact. This would allow them to reduce resource unpredictability, which in turn has a major impact on structuring seabird's MSFF dynamics.

  17. Nitrospina-like bacteria are the main drivers of nitrite oxidation in the seasonal upwelling area of the Eastern South Pacific (Central Chile ∼36°S).

    Science.gov (United States)

    Levipan, Héctor A; Molina, Verónica; Fernandez, Camila

    2014-12-01

    Aerobic nitrite oxidation in marine environments plays a key role in the nitrification process. Marine bacteria involved in this nitrate-producing process have however been seldom studied compared with the ammonia-oxidizing community. Here, we report for the first time the community structure of aerobic nitrite-oxidizing bacteria (NOB) in the seasonal upwelling and oxygen-deficient area off Central Chile. Analysis of 16S rRNA by tag pyrosequencing was combined with specific quantitative polymerase chain reaction (qPCR) and reverse transcription qPCR in summer and wintertime. Nitrospina-like bacteria were the only known NOB detected by means of pyrosequencing between 30 and 80 m depth, accounting for up to 5% of total bacteria. This guild was represented by 11 and 7 operational taxonomic units (97% cut-off) in winter and summertime respectively. Nitrospina-like bacteria were phylogenetically related to sequences retrieved from coastal upwelling, oxygen minimum zones and deep-sea environments. This group was also detected by qPCR with abundances that increased with depth throughout the water column. Importantly, Nitrospina from surface layers showed low abundances but high 16S rRNA : rDNA ratios and mainly in summertime. Overall, our results highlight the seasonal variability between the structure and physiological state of this community and suggest a significant role of Nitrospina in the nitrogen cycle of seasonal upwelling areas.

  18. A model study of the seasonality of sea surface temperature and circulation in the Atlantic North-Eastern Tropical Upwelling System.

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    Saliou eFaye

    2015-09-01

    Full Text Available The climatological seasonal cycle of the sea surface temperature (SST in the north-eastern tropical Atlantic (7-25°N, 26-12°W is studied using a mixed layer heat budget in a regional ocean general circulation model. The region, which experiences one of the larger SST cycle in the tropics, forms the main part of the Guinea Gyre. It is characterized by a seasonally varying open ocean and coastal upwelling system, driven by the movements of the intertropical convergence zone (ITCZ. The model annual mean heat budget has two regimes schematically. South of roughly 12°N, advection of equatorial waters, mostly warm, and warming by vertical mixing, is balanced by net air-sea flux. In the rest of the domain, a cooling by vertical mixing, reinforced by advection at the coast, is balanced by the air-sea fluxes. Regarding the seasonal cycle, within a narrow continental band, in zonal mean, the SST early decrease (from September, depending on latitude, until December is driven by upwelling dynamics off Senegal and Mauritania (15°-20°N, and instead by air-sea fluxes north and south of these latitudes. Paradoxically, the later peaks of upwelling intensity (from March to July, with increasing latitude essentially damp the warming phase, driven by air-sea fluxes. The open ocean cycle to the west, is entirely driven by the seasonal net air-sea fluxes. The oceanic processes significantly oppose it, but for winter north of ~18°N. Vertical mixing in summer-autumn tends to cool (warm the surface north (south of the ITCZ, and advective cooling or warming by the geostrophic Guinea Gyre currents and the Ekman drift. This analysis supports previous findings on the importance of air-sea fluxes offshore. It mainly offers quantitative elements on the modulation of the SST seasonal cycle by the ocean circulation, and particularly by the upwelling dynamics.Keywords: SST, upwelling, circulation, heat budget, observations, modeling

  19. Seasonal cycle of N:P:TA stoichiometry as a modulator of CO2 buffering in eastern boundary upwelling systems

    CSIR Research Space (South Africa)

    Gregor, L

    2013-10-01

    Full Text Available of water as it upwelled. Deviations from the Redfield ratio were dominated by denitrification and sulfate reduction in the subsurface waters. The N:P ratio was lowest (7.2) during autumn once anoxic waters had formed. Total alkalinity (TA) generation...

  20. Diversity and Transcriptional Levels of RuBisCO Form II of Sulfur-Oxidizing γ-Proteobacteria in Coastal-Upwelling Waters with Seasonal Anoxia

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    Bárbara Léniz

    2017-07-01

    Full Text Available Seasonal wind-driven upwelling, high primary production in surface waters, and oxygen deficiency in subsurface waters characterize the coastal ecosystem of the subtropical eastern South Pacific (ESP, and shape the nature and dynamics of the microbial community structure and function. We investigated the diversity, abundance, and transcriptional levels of the gene encoding the large subunit form II of the RuBisCO enzyme (cbbM in the pelagic microbial community at a continental-shelf site off central Chile over 2 years. We focused on cbbM genes affiliated with the sulfur-oxidizing γ-proteobacteria cluster, whose members are known to dominate in oxygen-deficient marine environments and are highly abundant in the study area. Phylogenetic analysis of cbbM sequences suggests the presence of a novel group of chemolithoautotrophs, closely related to the SUP05/ARCTIC96BD-19 clade. Through (RT-qPCR, we studied the cbbM gene abundance and transcript dynamics over an annual cycle, finding a significantly higher number of cbbM copies per unit volume in months of active upwelling and at depths in which oxygen was scarce or absent. The same temporal pattern was observed at the transcriptional level. We also analyzed the relative expression of key genes for carbon, nitrogen and sulfur cycling in six metatranscriptomic datasets, for two characteristic periods within the annual cycle: the anoxic upwelling and the suboxic downwelling. Our results indicate that coastal waters of the subtropical ESP contain transcriptionally active populations of carbon fixing pelagic bacteria, whose dynamics is controlled, in large part, by fluctuations in oxygen levels. They also suggest that chemolithoautotrophic processes coupled to the sulfur and nitrogen cycles become increasingly important for the carbon economy of marine coastal waters as oxygen concentrations decline.

  1. Coastal upwelling south of Madagascar: Temporal and spatial variability

    Science.gov (United States)

    Ramanantsoa, Juliano D.; Krug, M.; Penven, P.; Rouault, M.; Gula, J.

    2018-02-01

    Madagascar's southern coastal marine zone is a region of high biological productivity which supports a wide range of marine ecosystems, including fisheries. This high biological productivity is attributed to coastal upwelling. This paper provides new insights on the structure, variability and drivers of the coastal upwelling south of Madagascar. Satellite remote sensing is used to characterize the spatial extent and strength of the coastal upwelling. A front detection algorithm is applied to thirteen years of Multi-scale Ultra-high Resolution (MUR) Sea Surface Temperatures (SST) and an upwelling index is calculated. The influence of winds and ocean currents as drivers of the upwelling is investigated using satellite, in-situ observations, and a numerical model. Results reveal the presence of two well-defined upwelling cells. The first cell (Core 1) is located in the southeastern corner of Madagascar, and the second cell (Core 2) is west of the southern tip of Madagascar. These two cores are characterized by different seasonal variability, different intensities, different upwelled water mass origins, and distinct forcing mechanisms. Core 1 is associated with a dynamical upwelling forced by the detachment of the East Madagascar Current (EMC), which is reinforced by upwelling favourable winds. Core 2 appears to be primarily forced by upwelling favourable winds, but is also influenced by a poleward eastern boundary flow coming from the Mozambique Channel. The intrusion of Mozambique Channel warm waters could result in an asynchronicity in seasonality between upwelling surface signature and upwelling favourables winds.

  2. Phytoplankton biomass and microbial abundances during the spring upwelling season in the coastal area off Concepción, central-southern Chile: Variability around a time series station

    Science.gov (United States)

    Morales, Carmen E.; Anabalón, Valeria

    2012-01-01

    In the coastal system off Concepción, time series observations at a fixed station (St. 18) have shown strong seasonal changes in the oceanographic environment of the upper layer (blooms, dominated by microplanktonic diatoms, have usually overshadowed the relevance of the smaller microbial components during upwelling. This study focuses on the variability of oceanographic conditions and their association with the structure of the planktonic community (size fractionated chlorophyll-a and microbial abundances) in the upper layer during the upwelling season, examining the extent to which St. 18 is representative of the coastal system off Concepción during springtime. For this purpose, data from three consecutive springs (2004, 2005, 2006) were compared, which included cruises for all years (8 stations around St. 18) as well as monthly sampling at St. 18. Most of the spatial (submesoscale) variability in chlorophyll-a and the microbial components was not significant, but data dispersion around mean values was high. Water column structure (temperature and salinity) in the upper layer explained a significant fraction (25-65%) of the spatial variability in most of the planktonic components; their responses to oceanographic variability were linear in some cases and non-linear in others. For the most part, St. 18 appears to adequately represent mean oceanographic conditions and the structure of planktonic communities in the coastal waters off Concepción during springtime, however spatial variability needs to be taken into account in the interpretations of temporal changes at this fixed station as well as in assessments of carbon flow within, and exportation processes from, this upwelling system.

  3. Spatio-Temporal Variation in Effects of Upwelling on the Fatty Acid Composition of Benthic Filter Feeders in the Southern Benguela Ecosystem: Not All Upwelling Is Equal.

    Directory of Open Access Journals (Sweden)

    Eleonora Puccinelli

    Full Text Available Variability in mesoscale nearshore oceanographic conditions plays an important role in the distribution of primary production and food availability for intertidal consumers. Advection of nutrient rich waters by upwelling usually allows the proliferation of diatoms, later replaced by dinoflagellates. We examined upwelling effects on the fatty acid (FA signature of a benthic intertidal filter feeder to identify its response to pulsed variability in food availability. The study took place in two contrasting seasons and at two upwelling and two non-upwelling sites interspersed within the southern Benguela upwelling system of South Africa. We investigated the FA composition of the adductor muscles and gonads of the mussel Mytilus galloprovincialis to assess how FA are apportioned to the different tissues and whether this changes between upwelling and non-upwelling conditions. In situ temperature loggers used to identify upwelling conditions at the four sites indicated that such events occurred only at the upwelling centres and only in summer. Tissues differed strongly, with gonads presenting a higher proportion of essential FAs. This could reflect the faster turnover rate of gonad tissue or preferential retention of specific FA for reproductive purposes. FA composition did not vary as a direct function of upwelling, but there were strong dissimilarities among sites. Upwelling influenced mussel diets at one upwelling site while at the other, the expected signature of upwelling was displaced downstream of the core of upwelling. Condition Index (CI and Gonad Index (GI differed among sites and were not influenced by upwelling, with GI being comparable among sites. In addition, FA proportions were consistent among sites, indicating similar food quality and quantity over time and under upwelling and non-upwelling conditions. This suggests that the influence of upwelling on the west coast of South Africa is pervasive and diffuse, rather than discrete; while

  4. R2 Cognitive Computing

    Data.gov (United States)

    National Aeronautics and Space Administration — Robonaut 2, a crew assistant robotic prototype, will be integrated with IBM’s Watson. R2 will embody the artificial intelligence to enable new levels of robotic...

  5. Seasonal and inter-annual variability of the phytoplankton communities in an upwelling area of the Alborán Sea (SW Mediterranean Sea

    Directory of Open Access Journals (Sweden)

    Jesús M. Mercado

    2005-12-01

    Full Text Available Temporal variability (seasonal and inter-annual in the assembly of phytoplankton communities from the northern Alborán Sea was investigated. For this purpose, the taxonomic composition of the micro- and nano-phytoplankton communities at three fixed stations was determined every three months from 1994 to 2002. A total of 357 different taxa were identified. Most of them (about 54% were diatom species belonging to 57 genera. Dinoflagellates and coccolitophorids accounted for 118 and 30 taxa respectively. Two time periods could be differentiated with respect to the cell abundance. Thus, the mean abundance from 1994 to 1999 was 338 cell ml-1 and it dropped to about 60 cell ml-1 during the period 2000-2002. Diatoms and un-identified small flagellates dominated the communities during this first period, although a significant increase in the abundance of coccolitophorids occurred after 1997. Pseudo-nitzschia, Leptocylindrus and Chaetoceros were the dominant genera. In contrast, the coccolitophorids Emiliania huxleyi and Gephyrocapsa spp. quantitatively dominated the communities from 2000 to 2002. These shifts in the community assembly were assessed by performing a sample-oriented stepwise discriminant analysis (SDA. The analysis separated the samples into three year-groups, with great inter-annual variability. In contrast, the SDA did not find any seasonal sucessional pattern. In spite of this result, chlorophyll a and cell abundance tended to be higher in the spring period, which has been described for the whole Alborán basin. The nutrient concentrations in the 75 m upper seawater layer had inter-annual fluctuations. Thus, NO3-+NO2-, PO4-3 and Si(OH4 concentrations decreased significantly in 1997-1998. Additionally, lower Si(OH4 concentrations and Si:P molar ratios were obtained in 2000. These results suggest that the inter-annual shifts in the phytoplankton taxonomic composition were due to alterations in the nutrient regime. In this paper we

  6. Life cycle strategies of copepods in coastal upwelling zones

    Science.gov (United States)

    Peterson, W.

    1998-06-01

    Life cycles of copepods of coastal upwelling zones are of the multigenerational type—as many as 10 or more generations may be produced each year, depending upon water temperature, food concentration and length of the upwelling season. Abundant food resources and moderate temperature convey advantages to those copepods living in coastal upwelling zones, however, there is a clear disadvantage in that coastal upwelling zones are highly advective environments. Typically, water circulation patterns are such that surface waters are carried offshore, deeper waters carried onshore and most of the water column over the continental shelf is moving equatorward. The challenge to copepod species that inhabit upwelling systems is life cycle closure—how do eggs, nauplii, juveniles and adults avoid being swept out of these ecosystems in the face of persistent transport out of the system? In this review, I first list the species which dominate coastal upwelling ecosystems then discuss three variations on the multigenerational life cycle scheme that are observed in upwelling systems. The latter part of the review is devoted to discussion of how individuals are retained in the productive continental shelf waters within coastal upwelling ecosystems. The suggestion is made that the only copepod species that successfully achieve life cycle closure in such systems are those that are preadapted to upwelling circulation patterns. Our quantitative understanding of the relative importance of physical factors (such as advection) and biological factors (birth, growth, and mortality) on life cycle strategies and population dynamics is quite rudimentary. It would help our understanding if there were more field studies and more computer modeling studies that focused on seasonal cycles of abundance, development times and vertical distribution of life cycle stages, and measurements of water circulation patterns.

  7. Coastal upwelling in the Gelendzhik area of the Black Sea: Effect of wind and dynamics

    Science.gov (United States)

    Silvestrova, K. P.; Zatsepin, A. G.; Myslenkov, S. A.

    2017-07-01

    Long series data of a thermistor chain in the Black Sea coastal zone near Gelendzhik were analyzed. A thermistor chain installed 1 km offshore and at a depth of 22 m. There are full and incomplete upwelling events observed. The study of upwelling genesis based on: wind speed data from the NCEP/CFSR reanalysis and Gelendzhik weather station, velocity and direction of coastal currents measured by ADCP profiler moored on the bottom near the thermistor chain. Over the whole observation period (warm seasons of 2013-2015), more than 40 events of upwelling were registered four of them were full upwellings, when presence of under-thermocline water was observed near the sea surface. For every upwelling event, conditions prior to the changes in thermic structure, were analyzed. It is found that full upwelling generally occur under synergistic wind and current forcing. Fairly strong forcing of one of these factors is sufficient for partial upwelling to occur.

  8. Trends in the number of extreme hot SST days along the Canary Upwelling System due to the influence of upwelling

    Directory of Open Access Journals (Sweden)

    Xurxo Costoya

    2014-07-01

    Full Text Available Trends in the number of extreme hot days (days with SST anomalies higher than the 95% percentile were analyzed along the Canary Upwelling Ecosystem (CUE over the period 1982- 2012 by means of SST data retrieved from NOAA OI1/4 Degree. The analysis will focus on the Atlantic Iberian sector and the Moroccan sub- region where upwelling is seasonal (spring and summer are permanent, respectively. Trends were analyzed both near coast and at the adjacent ocean where the increase in the number of extreme hot days is higher. Changes are clear at annual scale with an increment of 9.8±0.3 (9.7±0.1 days dec-1 near coast and 11.6±0.2 (13.5±0.1 days dec-1 at the ocean in the Atlantic Iberian sector (Moroccan sub-region. The differences between near shore and ocean trends are especially patent for the months under intense upwelling conditions. During that upwelling season the highest differences in the excess of extreme hot days between coastal and ocean locations (Δn(#days dec-1 occur at those regions where coastal upwelling increase is high. Actually, Δn and upwelling trends have shown to be significantly correlated in both areas, R=0.88 (p<0.01 at the Atlantic Iberian sector and R=0.67 (p<0.01 at the Moroccan sub-region.

  9. Iberian and California-Oregon Upwelling Systems: trends and status of two upwelling systems at the same latitude over the last four decades.

    Science.gov (United States)

    Barreiro, B.; Barton, E. D.

    2012-04-01

    The study of Eastern Boundary Upwelling Systems is of vital importance, given the interest in rational management of the fisheries resources. The high level of biogeochemical activity associated with the physical process of upwelling increases primary production and enriches the living resources of these areas. This presentation focuses on the variability of these physical processes on daily to interdecadal scales, in an investigation of the effects of climate change in the Iberian and California-Oregon Upwelling Systems. The Upwelling Index (UI) was analysed for the period 1967-2010 at 35.5-44.5°N in both areas. The two systems differ in that the magnitudes of upwelling intensity off California-Oregon are 3.3 higher than off Iberia but they show a similar latitudinal behaviour. The annual/interannual scale variability of upwelling can be represented by the recently introduced Cumulative Upwelling Index (CUI) based on summing the mean daily UI. The seasonal cycle results show the length of upwelling season increases southwards from 180 to 300 days and a net upwelling occurs only for latitudes lower than 43°N. On the interannual scales, the CUI showed a roughly linear change at high and low latitudes (R>0.9), with slopes between 250 and -130 m3 s-1 km-1 day-1 in Iberian and 620 and -290 m3 s-1 km-1 day-1 in California-Oregon. The central areas (40.5-42.5°N) are less stable and shifted between net upwelling and downwelling over extended periods. This information helps us contextualize the present state of the study area and interpreted ongoing intensive process-oriented studies within the longer term variability.

  10. Seasonal anoxia over the western Indian continental shelf

    Digital Repository Service at National Institute of Oceanography (India)

    Naqvi, S.W.A; Naik, H.; Jayakumar, A; Pratihary, A; Narvenkar, G.; Kurian, S.; Agnihotri, R.; Shailaja, M.S.; Narvekar, P.V.

    The eastern Arabian Sea contains the only eastern-boundary-type upwelling environment in the entire Indian Ocean, albeit on a seasonal basis. During the southwest monsoon, when the surface current flows equatorward, upwelling brings oxygen...

  11. The future of coastal upwelling in the Humboldt current from model projections

    Science.gov (United States)

    Oyarzún, Damián; Brierley, Chris M.

    2018-03-01

    The Humboldt coastal upwelling system in the eastern South Pacific ocean is one of the most productive marine ecosystems in the world. A weakening of the upwelling activity could lead to severe ecological impacts. As coastal upwelling in eastern boundary systems is mainly driven by wind stress, most studies so far have analysed wind patterns change through the 20th and 21st Centuries in order to understand and project the phenomenon under specific forcing scenarios. Mixed results have been reported, and analyses from General Circulation Models have suggested even contradictory trends of wind stress for the Humboldt system. In this study, we analyse the ocean upwelling directly in 13 models contributing to phase 5 of the Coupled Model Intercomparison Project (CMIP5) in both the historical simulations and an extreme climate change scenario (RCP8.5). The upwelling is represented by the upward ocean mass flux, a newly-included variable that represents the vertical water transport. Additionally, wind stress, ocean stratification, Ekman layer depth and thermocline depth were also analysed to explore their interactions with coastal upwelling throughout the period studied. The seasonal cycle of coastal upwelling differs between the Northern and Southern Humboldt areas. At lower latitudes, the upwelling season spans most of the autumn, winter and spring. However, in the Southern Humboldt area the upwelling season takes place in spring and the summertime with downwelling activity in winter. This persists throughout the Historical and RCP8.5 simulations. For both the Northern and Southern Humboldt areas an increasing wind stress is projected. However, different trends of upwelling intensity are observed away from the sea surface. Whereas wind stress will continue controlling the decadal variability of coastal upwelling on the whole ocean column analysed (surface to 300 m depth), an increasing disconnect with upwelling intensity is projected below 100 m depth throughout the 21

  12. Under pressure: Climate change, upwelling and eastern boundary upwelling ecosystems

    Directory of Open Access Journals (Sweden)

    Marisol eGarcía-Reyes

    2015-12-01

    Full Text Available The IPCC AR5 provided an overview of the likely effects of climate change on Eastern Boundary Upwelling Systems (EBUS, stimulating increased interest in research examining the issue. We use these recent studies to develop a new synthesis describing climate change impacts on EBUS. We find that model and observational data suggest coastal upwelling-favorable winds in poleward portions of EBUS have intensified and will continue to do so in the future. Although evidence is weak in data that are presently available, future projections show that this pattern might be driven by changes in the positioning of the oceanic high-pressure systems rather than by deepening of the continental low-pressure systems, as previously proposed. There is low confidence regarding the future effects of climate change on coastal temperatures and biogeochemistry due to uncertainty in the countervailing responses to increasing upwelling and coastal warming, the latter of which could increase thermal stratification and render upwelling less effective in lifting nutrient-rich deep waters into the photic zone. Although predictions of ecosystem responses are uncertain, EBUS experience considerable natural variability and may be inherently resilient. However, multi-trophic level, end-to-end (i.e., winds to whales studies are needed to resolve the resilience of EBUS to climate change, especially their response to long-term trends or extremes that exceed pre-industrial ranges.

  13. The Effect of Alongcoast Advection on Pacific Northwest Shelf and Slope Water Properties in Relation to Upwelling Variability

    Science.gov (United States)

    Stone, Hally B.; Banas, Neil S.; MacCready, Parker

    2018-01-01

    The Northern California Current System experiences highly variable seasonal upwelling in addition to larger basin-scale variability, both of which can significantly affect its water chemistry. Salinity and temperature fields from a 7 year ROMS hindcast model of this region (43°N-50°N), along with extensive particle tracking, were used to study interannual variability in water properties over both the upper slope and the midshelf bottom. Variation in slope water properties was an order of magnitude smaller than on the shelf. Furthermore, the primary relationship between temperature and salinity anomalies in midshelf bottom water consisted of variation in density (cold/salty versus warm/fresh), nearly orthogonal to the anomalies along density levels (cold/fresh versus warm/salty) observed on the upper slope. These midshelf anomalies were well-explained (R2 = 0.6) by the combination of interannual variability in local and remote alongshore wind stress, and depth of the California Undercurrent (CUC) core. Lagrangian analysis of upper slope and midshelf bottom water shows that both are affected simultaneously by large-scale alongcoast advection of water through the northern and southern boundaries. The amplitude of anomalies in bottom oxygen and dissolved inorganic carbon (DIC) on the shelf associated with upwelling variability are larger than those associated with typical variation in alongcoast advection, and are comparable to observed anomalies in this region. However, a large northern intrusion event in 2004 illustrates that particular, large-scale alongcoast advection anomalies can be just as effective as upwelling variability in changing shelf water properties on the interannual scale.

  14. Riverine influence on nitrogen fixation in the upwelling region off Vietnam, South China Sea

    DEFF Research Database (Denmark)

    Voss, Maren; Bombar, Deniz; Loick, Natalie

    2006-01-01

    with the intermonsoon season and find that nitrogen fixation rates are app. 10 times higher during the monsoon season. However, this was not the case in the actual upwelling region - a 40-50 km wide strip along the coast - but further offshore, where the Mekong plume was noticeable. Therefore, we hypothesize...

  15. Dynamics of a "low-enrichment high-retention" upwelling center over the southern Senegal shelf

    Science.gov (United States)

    Ndoye, Siny; Capet, Xavier; Estrade, Philippe; Sow, Bamol; Machu, Eric; Brochier, Timothée.; Döring, Julian; Brehmer, Patrice

    2017-05-01

    Senegal is the southern tip of the Canary upwelling system. Its coastal ocean hosts an upwelling center which shapes sea surface temperatures between latitudes 12° and 15°N. Near this latter latitude, the Cape Verde headland and a sudden change in shelf cross-shore profile are major sources of heterogeneity in the southern Senegal upwelling sector (SSUS). SSUS dynamics is investigated by means of Regional Ocean Modeling System simulations. Configuration realism and resolution (Δx≈ 2 km) are sufficient to reproduce the SSUS frontal system. Our main focus is on the 3-D upwelling circulation which turns out to be profoundly different from 2-D theory: cold water injection onto the shelf and upwelling are strongly concentrated within a few tens of kilometers south of Cape Verde and largely arise from flow divergence in the alongshore direction; a significant fraction of the upwelled waters are retained nearshore over long distances while travelling southward under the influence of northerly winds. Another source of complexity, regional-scale alongshore pressure gradients, also contributes to the overall retention of upwelled waters over the shelf. Varying the degree of realism of atmospheric and oceanic forcings does not appreciably change these conclusions. This study sheds light on the dynamics and circulation underlying the recurrent sea surface temperature pattern observed during the upwelling season and offers new perspectives on the connections between the SSUS physical environment and its ecosystems. It also casts doubt on the validity of upwelling intensity estimations based on simple Ekman upwelling indices at such local scales.

  16. Natural ocean acidification at Papagayo upwelling system (north Pacific Costa Rica: implications for reef development

    Directory of Open Access Journals (Sweden)

    C. Sánchez-Noguera

    2018-04-01

    Full Text Available Numerous experiments have shown that ocean acidification impedes coral calcification, but knowledge about in situ reef ecosystem response to ocean acidification is still scarce. Bahía Culebra, situated at the northern Pacific coast of Costa Rica, is a location naturally exposed to acidic conditions due to the Papagayo seasonal upwelling. We measured pH and pCO2 in situ during two non-upwelling seasons (June 2012, May–June 2013, with a high temporal resolution of every 15 and 30 min, respectively, using two Submersible Autonomous Moored Instruments (SAMI-pH, SAMI-CO2. These results were compared with published data from the 2009 upwelling season. Findings revealed that the carbonate system in Bahía Culebra shows a high temporal variability. Incoming offshore waters drive intra- and interseasonal changes. Lowest pH (7.8 and highest pCO2 (658.3 µatm values measured during a cold-water intrusion event in the non-upwelling season were similar to those minimum values reported from upwelling season (pH  =  7.8, pCO2  =  643.5 µatm, unveiling that natural acidification also occurs sporadically in the non-upwelling season. This affects the interaction of photosynthesis, respiration, calcification and carbonate dissolution and the resulting diel cycle of pH and pCO2 in the reefs of Bahía Culebra. During the non-upwelling season, the aragonite saturation state (Ωa rises to values of  >  3.3 and during the upwelling season falls below 2.5. The Ωa threshold values for coral growth were derived from the correlation between measured Ωa and coral linear extension rates which were obtained from the literature and suggest that future ocean acidification will threaten the continued growth of reefs in Bahía Culebra. These data contribute to building a better understanding of the carbonate system dynamics and coral reefs' key response (e.g., coral growth to natural low-pH conditions, in upwelling areas in the eastern tropical

  17. Natural ocean acidification at Papagayo upwelling system (north Pacific Costa Rica): implications for reef development

    Science.gov (United States)

    Sánchez-Noguera, Celeste; Stuhldreier, Ines; Cortés, Jorge; Jiménez, Carlos; Morales, Álvaro; Wild, Christian; Rixen, Tim

    2018-04-01

    Numerous experiments have shown that ocean acidification impedes coral calcification, but knowledge about in situ reef ecosystem response to ocean acidification is still scarce. Bahía Culebra, situated at the northern Pacific coast of Costa Rica, is a location naturally exposed to acidic conditions due to the Papagayo seasonal upwelling. We measured pH and pCO2 in situ during two non-upwelling seasons (June 2012, May-June 2013), with a high temporal resolution of every 15 and 30 min, respectively, using two Submersible Autonomous Moored Instruments (SAMI-pH, SAMI-CO2). These results were compared with published data from the 2009 upwelling season. Findings revealed that the carbonate system in Bahía Culebra shows a high temporal variability. Incoming offshore waters drive intra- and interseasonal changes. Lowest pH (7.8) and highest pCO2 (658.3 µatm) values measured during a cold-water intrusion event in the non-upwelling season were similar to those minimum values reported from upwelling season (pH = 7.8, pCO2 = 643.5 µatm), unveiling that natural acidification also occurs sporadically in the non-upwelling season. This affects the interaction of photosynthesis, respiration, calcification and carbonate dissolution and the resulting diel cycle of pH and pCO2 in the reefs of Bahía Culebra. During the non-upwelling season, the aragonite saturation state (Ωa) rises to values of > 3.3 and during the upwelling season falls below 2.5. The Ωa threshold values for coral growth were derived from the correlation between measured Ωa and coral linear extension rates which were obtained from the literature and suggest that future ocean acidification will threaten the continued growth of reefs in Bahía Culebra. These data contribute to building a better understanding of the carbonate system dynamics and coral reefs' key response (e.g., coral growth) to natural low-pH conditions, in upwelling areas in the eastern tropical Pacific and beyond.

  18. Warm water upwelling in the Cenozoic Era

    Science.gov (United States)

    Zhang, Y.

    2017-12-01

    Modern observations show that the occurrence of wind-driven upwelling is often tied to cold sea surface temperatures (SSTs). However, SST reconstructions indicate that globally, the upwelling regions were much warmer in the Miocene and Pliocene. This questions the overall strength of deep-water upwelling in the geological past, with important implications for the associated atmospheric, climatic and biogeochemical processes, and the fate of upwelling regions in a high-CO2 world. We recently showed that the eastern equatorial Pacific (EEP) was characterized by strong air-sea disequilibrium of CO2 during the late Miocene - Pliocene. Combined with export productivity proxies, we interpreted these as signs of vigorous upwelling. The upwelled waters were nutrient- and CO2-rich, but warm. The cause of the "excess" warming in the upwelling regions is linked to the source waters which originated from the higher latitudes. In other words, the reduced east (upwelling) to west (non-upwelling) temperature gradients along the equator in major ocean basins are rooted in the reduced meridional temperature gradients. To further test this hypothesis, we examine the history of the EEP and temperature gradients during the even-warmer Eocene - middle Miocene.

  19. Upwelling and Other Environmental Influences on Growth of a Nearshore Benthic Fish

    Science.gov (United States)

    von Biela, V. R.; Zimmerman, C. E.; Kruse, G. H.; Mueter, F. J.; Black, B.; Douglas, D. C.; Bodkin, J. L.

    2016-02-01

    The role of upwelling in nearshore benthic systems is more uncertain compared to the relatively strong positive associations with pelagic production. To understand how upwelling and other environmental conditions influence nearshore benthic production, we developed an annual index of production from growth increments recorded in otoliths of kelp greenling (Hexagrammos decagrammus) at nine sites in the seasonally-upwelling California Current and downwelling Alaska Coastal currents. Kelp greenling are a benthic-feeding fish common in kelp forests with food webs sustained by both kelp and phytoplankton primary production. We explored the influence of basin- and local-scale conditions, including upwelling, across all seasons at lags up to two years taken to represent changes in the quantity and quality of prey. Upwelling strength was positively related to fish growth in both current systems, although relationships in the Alaska Coastal Current were indicative of faster growth with relaxed downwelling, rather than upwelling. Looking across a suite of basin- and local-scale environmental indicators, complex relationships emerged in the California Current, with faster growth related to within-year warm conditions and lagged-year cool conditions. In contrast, fish in the downwelling system grew faster both during and subsequent to warm conditions. The complex lag-dependent dynamics in the upwelling system may reflect differences in conditions that promote quantity versus quality of benthic invertebrate prey. Thus, we hypothesize that benthic production is maximized when cool and warm years alternate during periods of high frequency climate variability in the California Current. Such a pattern is consistent with previous findings suggesting that benthic invertebrate abundance (e.g., recruitment) is food-limited during warm years with reduced upwelling, while quality (e.g., energy content) is temperature-limited during cool years.

  20. On the presence of coastal upwelling along the northeastern Tyrrhenian coast

    Science.gov (United States)

    Martellucci, Riccardo; Melchiorri, Cristiano; Costanzo, Lorenzo; Marcelli, Marco

    2017-04-01

    The Mediterranean region shows a high climate variability due to the interactions between mid-latitude and tropical processes. This variability makes the Mediterranean a potentially vulnerable region to climatic changes. The present research aims to investigate the hydrographical response to Northerly wind in the northeastern Tyrrhenian coast, to identify the relations between upwelling events and teleconnection patterns. In the Tyrrhenian basin northerly winds flow between North-East and North-West and could be considered upwelling favorable winds. This atmospheric circulation can causes a divergent flow near the coast that generates a subsurface water flows inshore toward the coast up to the surface layer that is upwelling. This phenomenon strongly influence the marine ecosystems, contributing to the supply of nutrients and affecting the primary producers. In this context multi-platform observing system is an important tool to follow the evolution of these phenomena. Sea temperature and wind field acquired by the C-CEMS Observing system were used to identify upwelling phenomena between 2012 and 2016, in the coastal area of Civitavecchia, Northern Tyrrhenian sea, Italy. Moreover a thirty years' wind-driven upwelling conditions have been studied in the area. ERA-Interim (ECMWF) wind data for the period 1982-2012 have been used to compute the distribution of upwelling favorable wind events. These have been compared to "Copernicus Marine Environment Monitoring Service" Sea Surface Temperature (SST) to compute upwelling events. Upwelling favorable wind has been defined in the sector between Northwest and Northeast (Wd >330°N & Wd analysis. An increase of upwelling events in the Tyrrhenian coast is observed in the last thirty years; the occurrence of upwelling events has a seasonal oscillation, with a maximum frequency during winter and spring seasons. In the last decade an increase of these events in winter and a decrease in spring is observed; also a recurrence of

  1. Bioturbational structures record environmental changes in the upwelling area off Vietnam (South China Sea) for the last 150,000 years

    NARCIS (Netherlands)

    Wetzel, A.; Tjallingii, R.; Wiesner, M.G.

    2011-01-01

    The sediments in the upwelling area off central Vietnam are totally bioturbated and display a low-diverse assemblage of bioturbational structures. During interglacial times (Marine Isotope Stage MIS 1, 5a, 5c, 5e), summer monsoon leads to pronounced upwelling and seasonally pulsed arrival of organic

  2. Surface circulation and upwelling patterns around Sri Lanka

    Science.gov (United States)

    de Vos, A.; Pattiaratchi, C. B.; Wijeratne, E. M. S.

    2013-09-01

    Sri Lanka occupies a unique location within the equatorial belt in the northern Indian Ocean with the Arabian Sea on its western side and the Bay of Bengal on its eastern side. The region is characterised by bi-annually reversing monsoon winds resulting from seasonal differential heating and cooling of the continental land mass and the ocean. This study explored elements of the dynamics of the surface circulation and coastal upwelling in the waters around Sri Lanka using satellite imagery and the Regional Ocean Modelling System (ROMS) configured to the study region and forced with ECMWF interim data. The model was run for 2 yr to examine the seasonal and shorter term (∼10 days) variability. The results confirmed the presence of the reversing current system in response to the changing wind field: the eastward flowing Southwest Monsoon Current (SMC) during the Southwest (SW) monsoon transporting 11.5 Sv and the westward flowing Northeast Monsoon Current (NMC) transporting 9.5 Sv during the Northeast (NE) monsoon, respectively. A recirculation feature located to the east of Sri Lanka during the SW monsoon, the Sri Lanka Dome, is shown to result from the interaction between the SMC and the Island of Sri Lanka. Along the eastern and western coasts, during both monsoon periods, flow is southward converging along the south coast. During the SW monsoon the Island deflects the eastward flowing SMC southward whilst along the east coast the southward flow results from the Sri Lanka Dome recirculation. The major upwelling region, during both monsoon periods, is located along the south coast and is shown to be due to flow convergence and divergence associated with offshore transport of water. Higher surface chlorophyll concentrations were observed during the SW monsoon. The location of the flow convergence and hence the upwelling centre was dependent on the relative strengths of wind driven flow along the east and west coasts: during the SW (NE) monsoon the flow along the

  3. Coastal upwelling fluxes of O2, N2O, and CO2 assessed from continuous atmospheric observations at Trinidad, California

    Directory of Open Access Journals (Sweden)

    T. J. Lueker

    2004-01-01

    Full Text Available Continuous atmospheric records of O2/N2, CO2 and N2O obtained at Trinidad, California document the effects of air-sea exchange during coastal upwelling and plankton bloom events. The atmospheric records provide continuous observations of air-sea fluxes related to synoptic scale upwelling events over several upwelling seasons. Combined with satellite, buoy and local meteorology data, calculated anomalies in O2/N2 and N2O were utilized in a simple atmospheric transport model to compute air-sea fluxes during coastal upwelling. CO2 fluxes were linked to the oceanic component of the O2 fluxes through local hydrographic data and estimated as a function of upwelling intensity (surface ocean temperature and wind speed. Regional air-sea fluxes of O2/N2, N2O, and CO2 during coastal upwelling were estimated with the aid of satellite wind and SST data. Upwelling CO2 fluxes were found to represent ~10% of export production along the northwest coast of North America. Synoptic scale upwelling events impact the net exchange of atmospheric CO2 along the coastal margin, and will vary in response to the frequency and duration of alongshore winds that are subject to climate change.

  4. Upwelling Dynamic Based on Satellite and INDESO Data in the Flores Sea

    Science.gov (United States)

    Kurniawan, Reski; Suriamihardja, D. A.; Hamzah Assegaf, Alimuddin

    2018-03-01

    Upwelling phenomenon is crucial to be forecasted, mainly concerning the information of potential fishery areas. Utilization of calibrated model for recorded upwelling such as INDESO gives benefit for historical result up to the present time. The aim of this study is to estimate areas and seasons of upwelling occurrences in the Flores Sea using data assimilation of satellite and modeling result. This study uses sea surface temperature, chlorophyll-a data from level 3 of MODIS image and sea surface height from satellite Jason-2 monthly for three years (2014-2016) and INDESO model data for sea surface temperature, sea surface height, and chlorophyll-a daily for three years (2014-2016). The upwelling is indicated by declining of sea surface temperature, sea surface height and increasing of chlorophyll-a. Verification is conducted by comparing the model result with recorded MODIS satellite image. The result shows that the area of southern Makassar Strait having occurrences of upwelling phenomenon every year starting in June, extended to July and August. The strongest upwelling occurred in 2015 covering more or less the area of 23,000 km2. The relation of monthly data of satellite has significantly correlated with daily data of INDESO model

  5. A Lagrangian study tracing water parcel origins in the Canary Upwelling System

    Directory of Open Access Journals (Sweden)

    Evan Mason

    2012-08-01

    Full Text Available The regional ocean circulation within the Canary Upwelling System between 31°N and 35°N is studied using numerical tools. Seasonal mean and near-instantaneous velocity fields from a previously-generated climatological Regional Ocean Modelling System (ROMS solution of the Canary Basin are used to force a series of offline Lagrangian particle-tracking experiments. The primary objective is to identify the pathways through which water parcels arrive at the upwelling region north of Cape Ghir. Examining year-long pathways, the Azores Current contributes over 80% of particles annually, of which a large proportion arrive directly from offshore (from the northwest, while others travel along the shelf and slope from the Gulf of Cadiz. The remaining ~20% originate within the Gulf of Cadiz or come from the south, although the southern contribution is only significant in autumn and winter. When season-long pathways are considered, the alongshore contributions become increasingly important: northern contributions reach 40% in spring and summer, while southern values exceed 35% in winter. This study also shows that coastal upwelling changes both spatially and temporally. Upwelling becomes intensified near Cape Beddouza, with most upwelling occurring within ~40 km from shore although significant values may reach as far as 120 km offshore north of Cape Beddouza; at these locations the offshore integrated upwelling reaches as much as 4 times the offshore Ekman transport. In the Cape Beddouza area (32°N to 33°N, upwelling is negligible in February but intensifies in autumn, reaching as much as 3 times the offshore Ekman transport.

  6. Role of nutrient recycling in upwelling ecosystems

    Energy Technology Data Exchange (ETDEWEB)

    Whitledge, T E

    1979-01-01

    The regeneration of nitrogen is an important process that increases the efficiency of the upwelling ecosystem by enlarging their spatial scales. Ammonium regeneration was considered to contribute 42 to 72 percent of phytoplankton nitrogen requirements in the northwest Africa, Peru, and Baja California upwelling systems. Zooplankton are responsible for the largest portion of regenerated nitrogen; however, fish and benthic sediments may be nearly as large. Comparisons of the importance of ammonium regeneration in upwelling areas with coastal and open ocean regions indicate that the percentage contributions are similar. Future nutrient regeneration studies are needed to assess the recycling of benthic sediments, microzooplankton, gelatinous zooplankton, demersal fish, bacterioplankton, and mollusks.

  7. Nearshore currents on the southern Namaqua shelf of the Benguela upwelling system

    Science.gov (United States)

    Fawcett, A. L.; Pitcher, G. C.; Shillington, F. A.

    2008-05-01

    Nearshore currents of the southern Namaqua shelf were investigated using data from a mooring situated three and a half kilometres offshore of Lambert's Bay, downstream of the Cape Columbine upwelling cell, on the west coast of South Africa. This area is susceptible to harmful algal blooms (HABs) and wind-forced variations in currents and water column structure are critical in determining the development, transport and dissipation of blooms. Time series of local wind data, and current and temperature profile data are described for three periods, considered to be representative of the latter part of the upwelling season (27 January-22 February), winter conditions (5-29 May) and the early part of the upwelling season (10 November-12 December) in 2005. Differences observed in mean wind strength and direction between data sets are indicative of seasonal changes in synoptic meteorological conditions. These quasi-seasonal variations in wind forcing affect nearshore current flow, leading to mean northward flow in surface waters early in the upwelling season when equatorward, upwelling-favourable winds are persistent. Mean near-surface currents are southward during the latter part of the upwelling season, consistent with more prolonged periods of relaxation from equatorward winds, and under winter conditions when winds were predominantly poleward. Within these seasonal variations in mean near-surface current direction, two scales of current variability were evident within all data sets: strong inertial oscillations were driven by diurnal winds and introduced vertical shear into the water column enhancing mixing across the thermocline, while sub-inertial current variability was driven by north-south wind reversals at periods of 2-5 days. Sub-inertial currents were found to lag wind reversals by approximately 12 h, with a tendency for near-surface currents to flow poleward in the absence of wind forcing. Consistent with similar sites along the Californian and Iberian coasts

  8. Does mesoscale matters in decadal changes observed in the northern Canary upwelling system?

    Science.gov (United States)

    Relvas, P.; Luís, J.; Santos, A. M. P.

    2009-04-01

    The Western Iberia constitutes the northern limb of the Canary Current Upwelling System, one of the four Eastern Boundary Upwelling Systems of the world ocean. The strong dynamic link between the atmosphere and the ocean makes these systems highly sensitive to global change, ideal to monitor and investigate its effects. In order to investigate decadal changes of the mesoscale patterns in the Northern Canary upwelling system (off Western Iberia), the field of the satellite-derived sea surface temperature (SST) trends was built at the pixel scale (4x4 km) for the period 1985-2007, based on the monthly mean data from the Advanced Very High Resolution Radiometer (AVHRR) on board NOAA series satellites, provided by the NASA Physical Oceanography Distributed Active Archive Center (PO.DAAC) at the Jet Propulsion Laboratory. The time series were limited to the nighttime passes to avoid the solar heating effect and a suite of procedures were followed to guarantee that the temperature trends were not biased towards the seasonally more abundant summer data, when the sky is considerably clear. A robust linear fit was applied to each individual pixel, crossing along the time the same pixel in all the processed monthly mean AVHRR SST images from 1985 until 2007. The field of the SST trends was created upon the slopes of the linear fits applied to each pixel. Monthly mean SST time series from the one degree enhanced International Comprehensive Ocean-Atmosphere Data Set (ICOADS) and from near-shore measurements collected on a daily basis by the Portuguese Meteorological Office (IM) are also used to compare the results and extend the analysis back until 1960. A generalized warming trend is detected in the coastal waters off Western Iberia during the last decades, no matter which data set we analyse. However, significant spatial differences in the warming rates are observed in the satellite-derived SST trends. Remarkably, off the southern part of the Western Iberia the known

  9. Atypical delta sup(13) C signature in Globigerina bulloides at the ODP site 723A (Arabian Sea): Implications of environmental changes caused by upwelling

    Digital Repository Service at National Institute of Oceanography (India)

    Naidu, P.D.; Niitsuma, N.

    Production of Globigerina bulloides generally increases during upwelling in the tropical ocean and, in particular, during southwest monsoon season in the Arabian Sea. We studied the delta sup(13) C signatures of Globigerina bulloides from Ocean...

  10. Upwelling along the east coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    Murty, C.S.; Varadachari, V.V.R.

    the premonsoon and monsoon periods. Waters from deeper layers of the shelf appear to reach the surface causing considerable fall of surface temperature near the coast. The probable causes for these differences in upwelling along the coast are discussed...

  11. Impact of Equatorial Waves on the Variability of Upwelling Process Along West Coast of India

    Science.gov (United States)

    Prakash, K. R.; Nigam, T.; Pant, V.

    2017-12-01

    Coastal upwelling is a seasonal phenomenon along the south eastern Arabian Sea (SEAS) due to favourable wind setup during Indian Summer Monsoon Season (June-September). This upwelling brings subsurface cold and nutrient rich water to the surface layers. The cold water transported northward by the altered along shore current of west coast of India in the post-monsoon season. The different climatological forcing of positive Indian Ocean Dipole (IOD) and normal years were utilised to simulate the upwelling off the west coast of India using a three dimensional Regional Ocean Modelling System (ROMS). Strength of upwelling and the northward transport were found to be weaken for positive IOD simulations as compared to normal years. Analysis suggests that the meridional wind stress weakening resulted into a decrease in strength of West India Coastal Current (WICC) and, therefore, reduced magnitude of offshore Ekman transport. The mixed layer heat budget calculation also supports the findings by showing dominated vertical process in comparison to net heat flux effect. The post-monsoon northward transport of cold water was found to be correlated with the coastally trapped downwelling Kelvin waves. These waves are the only remote forcing from the Bay of Bengal that reaches to the south-eastern Arabian Sea during the months of October-December. The composite of sea surface height anomalies for the positive IOD and normal years shows that the downwelling Kelwin wave was absent during October-December.

  12. Factors structuring the phytoplankton community in the upwelling site off El Loa River in northern Chile

    Science.gov (United States)

    Herrera, Liliana; Escribano, Ruben

    2006-06-01

    Understanding processes affecting the structure of the autotrophic community in marine ecosystems is relevant because species-dependent characters may affect productivity and carbon fluxes of the ocean. In this work, we studied the influence of oceanographic variability on phytoplankton species composition at a coastal upwelling site off northern Chile. Four seasonal cruises carried out during 2003 off El Loa River (21°S) showed that upwelling occurs year-round supporting a large number of diatoms, dinoflagellates, naked nanoflagellates, and silicoflagellates. The analysis of species composition showed that changes in the structure of the autotrophic community are expressed both in abundance and in differences in species assemblages. These changes occurred not only over the seasonal scale but also over the spatial pattern of distribution, and they correlated well to temporal variability of upwelling and spatial variation of upwelling conditions over the cross-shelf axis. A K-means clustering and principal component analyses showed that species assemblages can be represented by few dominant species strongly coupled to alternate upwelling vs. non-upwelling conditions. Both conditions are well defined, and mostly explained by changes in depth of the upper boundary of the oxygen minimum zone (OMZ) (a prominent feature in northern Chile), surface temperature and water column stratification. Abundance of dominant phytoplankton species were strongly correlated to both OMZ depth and water column stratification. Processes through which OMZ depth might influence species abundance and composition are unknown, although they may relate to changes in redox conditions which affect the nutrient field. Another explanation may relate to changes in grazing pressure derived from the effect of low oxygen water on zooplankton vertical distribution.

  13. Atmosphere-ocean feedbacks in a coastal upwelling system

    Science.gov (United States)

    Alves, J. M. R.; Peliz, A.; Caldeira, R. M. A.; Miranda, P. M. A.

    2018-03-01

    The COAWST (Coupled Ocean-Atmosphere-Wave-Sediment Transport) modelling system is used in different configurations to simulate the Iberian upwelling during the 2012 summer, aiming to assess the atmosphere-ocean feedbacks in the upwelling dynamics. When model results are compared with satellite measurements and in-situ data, two-way coupling is found to have a moderate impact in data-model statistics. A significant reinforcement of atmosphere-ocean coupling coefficients is, however, observed in the two-way coupled run, and in the WRF and ROMS runs forced by previously simulated SST and wind fields, respectively. The increasing in the coupling coefficient is associated with slight, but potentially important changes in the low-level coastal jet in the atmospheric marine boundary layer. While these results do not imply the need for fully coupled simulations in many applications, they show that in seasonal numerical studies such simulations do not degrade the overall model performance, and contribute to produce better dynamical fields.

  14. Effects of structural factors on upwelling fouling community, Southeast Brazil

    Directory of Open Access Journals (Sweden)

    Bruno Pereira Masi

    Full Text Available Abstract To assess the successional pattern of fouling organisms three hypotheses were tested: 1 a thermocline is caused by seasonal upwelling events, and therefore, depth influences the successional trajectory of the fouling community; 2 a reduction in the intensity of natural light of the substrate influences the fouling composition and the successional trajectory; 3 fish predation influences the community composition and its successional trajectory. During one year, up-facing and down-facing PVC panels on open, partially caged or fully caged, and placed at depths of 1.5 and 3.5 meters were monthly sampled by digital photograph to determine the community composition and by contact point to estimate the percent coverage of organisms. The upwelling impact provided different water masses, and light intensity was also a determining factor of the overall successional trajectory of the fouling community. After the installation of full and partial cages, differences were identified in the respective successional trajectories. The results of this study suggest that each physical factor or biological process can change the successional trajectory of the community, and the successional model (e.g., convergent, divergent, parallel, or cyclic depends on the magnitudes of the determinants that act on the community at each stage of its trajectory.

  15. Spatiotemporal variation of vertical particle fluxes and modelled chlorophyll a standing stocks in the Benguela Upwelling System

    Science.gov (United States)

    Vorrath, Maria-Elena; Lahajnar, Niko; Fischer, Gerhard; Libuku, Viktor Miti; Schmidt, Martin; Emeis, Kay-Christian

    2018-04-01

    Marine particle fluxes from high productive coastal upwelling systems return upwelled CO2 and nutrients to the deep ocean and sediments and have a substantial impact on the global carbon cycle. This study examines relations between production regimes on the shelf and over the continental margin of the Benguela Upwelling System (BUS) in the SE Atlantic Ocean. Data of composition and timing of vertical particle flux come from sediment trap time series (deployed intermittently between 1988 and 2014) in the regions Walvis Ridge, Walvis Bay, Luederitz and Orange River. We compare their seasonal variability to modelled patterns of chlorophyll concentrations in a 3-D ecosystem model. Both modelled seasonal chlorophyll a standing stocks and sampled particle flux patterns are highly correspondent with a bimodal seasonal cycle offshore the BUS. The material in the particle flux in offshore traps is dominantly carbonate (40-70%), and flux peaks in offshore particle flux originate from two independent events: in austral autumn thermocline shoaling and vertical mixing are decoupled from coastal upwelling, while fluxes in spring coincide with the upwelling season, indicated by slightly elevated biogenic opal values at some locations. Coastal particle fluxes are characterized by a trimodal pattern and are dominated by biogenic opal (22-35%) and organic matter (30-60%). The distinct seasonality in observed fluxes on the shelf is caused by high variability in production, sinking behaviour, wind stress, and hydrodynamic processes. We speculate that global warming will increase ocean stratification and alter coastal upwelling, so that consequences for primary production and particle flux in the BUS are inevitable.

  16. Temporal variability and phylogenetic characterization of planktonic anammox bacteria in the coastal upwelling ecosystem off central Chile

    Science.gov (United States)

    Galán, Alexander; Molina, Verónica; Belmar, Lucy; Ulloa, Osvaldo

    2012-01-01

    The phylogenetic affiliation and temporal variability in the abundance of planktonic anammox bacteria were studied at a time-series station above the continental shelf off central Chile (∼36°S; bottom depth 93 m), a wind-driven, seasonal upwelling area, between August 2006 and April 2008. The study was carried out by cloning and sequencing the 16S rRNA gene and by using catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH). Our results showed the presence of a single anammox bacteria-like ribotype during both upwelling and non-upwelling seasons, which was phylogenetically associated with a recently described oxygen-minimum-zone subcluster within the Candidatus Scalindua clade. Moreover, clear differences were observed in the temporal and vertical distribution of anammox cells. During the upwelling season (austral spring-summer), relatively high abundances (∼5500 cells mL -1) and large cells (0.8 μm 3-75.7 fg C cell -1) were found below 20 m depth. In contrast, during the non-upwelling season (austral fall-winter), lower abundances (∼600 cells mL -1) and smaller cells (0.1 μm 3-22.8 fg C cell -1) were found, predominantly associated with the bottom layer. Overall, our results indicate that the abundance and vertical distribution of anammox planktonic assemblages are related to the occurrence of seasonal, wind-driven, coastal upwelling, which in turn appears to offer favorable conditions for the development of these microorganisms. The dominance of a unique anammox bacteria-like ribotype could be related to the high environmental variability observed in the system, which prevents the establishment of other anammox lineages.

  17. Mastering Microsoft Windows Server 2008 R2

    CERN Document Server

    Minasi, Mark; Finn, Aidan

    2010-01-01

    The one book you absolutely need to get up and running with Windows Server 2008 R2. One of the world's leading Windows authorities and top-selling author Mark Minasi explores every nook and cranny of the latest version of Microsoft's flagship network operating system, Windows Server 2008 R2, giving you the most in-depth coverage in any book on the market.: Focuses on Windows Windows Server 2008 R2, the newest version of Microsoft's Windows' server line of operating system, and the ideal server for new Windows 7 clients; Author Mark Minasi is one of the world's leading Windows authorities and h

  18. Spatial and temporal variability in coccolithophore abundance and distribution in the NW Iberian coastal upwelling system

    Directory of Open Access Journals (Sweden)

    B. Ausín

    2018-01-01

    Full Text Available A systematic investigation of the spatial and temporal variability in coccolithophore abundance and distribution through the water column of the NW Iberian coastal upwelling system was performed. From July 2011 to June 2012, monthly sampling at various water depths was conducted at two parallel stations located at 42° N. Total coccosphere abundance was higher at the outer-shelf station, where warmer, nutrient-depleted waters favoured coccolithophore rather than phytoplanktonic diatom blooms, which are known to dominate the inner-shelf location. In seasonal terms, higher coccosphere and coccolith abundances were registered at both stations during upwelling seasons, coinciding with high irradiance levels. This was typically in conjunction with stratified, nutrient-poor conditions (i.e. relaxing upwelling conditions. However, it also occurred during some upwelling events of colder, nutrient-rich subsurface waters onto the continental shelf. Minimum abundances were generally found during downwelling periods, with unexpectedly high coccolith abundance registered in subsurface waters at the inner-shelf station. This finding can only be explained if strong storms during these downwelling periods favoured resuspension processes, thus remobilizing deposited coccoliths from surface sediments, and hence hampering the identification of autochthonous coccolithophore community structure. At both locations, the major coccolithophore assemblages were dominated by Emiliania huxleyi, small Gephyrocapsa group, Gephyrocapsa oceanica, Florisphaera profunda, Syracosphaera spp., Coronosphaera mediterranea, and Calcidiscus leptoporus. Ecological preferences of the different taxa were assessed by exploring the relationships between environmental conditions and temporal and vertical variability in coccosphere abundance. These findings provide relevant information for the use of fossil coccolith assemblages in marine sediment records, in order to infer past

  19. Spatial and temporal variability in coccolithophore abundance and distribution in the NW Iberian coastal upwelling system

    Science.gov (United States)

    Ausín, Blanca; Zúñiga, Diana; Flores, Jose A.; Cavaleiro, Catarina; Froján, María; Villacieros-Robineau, Nicolás; Alonso-Pérez, Fernando; Arbones, Belén; Santos, Celia; de la Granda, Francisco; Castro, Carmen G.; Abrantes, Fátima; Eglinton, Timothy I.; Salgueiro, Emilia

    2018-01-01

    A systematic investigation of the spatial and temporal variability in coccolithophore abundance and distribution through the water column of the NW Iberian coastal upwelling system was performed. From July 2011 to June 2012, monthly sampling at various water depths was conducted at two parallel stations located at 42° N. Total coccosphere abundance was higher at the outer-shelf station, where warmer, nutrient-depleted waters favoured coccolithophore rather than phytoplanktonic diatom blooms, which are known to dominate the inner-shelf location. In seasonal terms, higher coccosphere and coccolith abundances were registered at both stations during upwelling seasons, coinciding with high irradiance levels. This was typically in conjunction with stratified, nutrient-poor conditions (i.e. relaxing upwelling conditions). However, it also occurred during some upwelling events of colder, nutrient-rich subsurface waters onto the continental shelf. Minimum abundances were generally found during downwelling periods, with unexpectedly high coccolith abundance registered in subsurface waters at the inner-shelf station. This finding can only be explained if strong storms during these downwelling periods favoured resuspension processes, thus remobilizing deposited coccoliths from surface sediments, and hence hampering the identification of autochthonous coccolithophore community structure. At both locations, the major coccolithophore assemblages were dominated by Emiliania huxleyi, small Gephyrocapsa group, Gephyrocapsa oceanica, Florisphaera profunda, Syracosphaera spp., Coronosphaera mediterranea, and Calcidiscus leptoporus. Ecological preferences of the different taxa were assessed by exploring the relationships between environmental conditions and temporal and vertical variability in coccosphere abundance. These findings provide relevant information for the use of fossil coccolith assemblages in marine sediment records, in order to infer past environmental conditions, of

  20. The Monoceros R2 Molecular Cloud

    Science.gov (United States)

    Carpenter, J. M.; Hodapp, K. W.

    2008-12-01

    The Monoceros R2 region was first recognized as a chain of reflection nebulae illuminated by A- and B-type stars. These nebulae are associated with a giant molecular cloud that is one of the closest massive star forming regions to the Sun. This chapter reviews the properties of the Mon R2 region, including the namesake reflection nebulae, the large scale molecula= r cloud, global star formation activity, and properties of prominent star forming regions in the cloud.

  1. The development and decline of phytoplankton blooms in the southern Benguela upwelling region

    International Nuclear Information System (INIS)

    Brown, P.C.

    1986-10-01

    Productivity/chlorophyll a relationship are investigated with a view to estimating phytoplankton productivity from extensive chlorophyll a measurements in the southern Benguela region. Phytoplankton bloom dynamics in newly upwelled water off the Cape Peninsula are investigated on five different occasions during the upwelling season. A drogue was used to tag a 'parcel' of upwelled water which was monitored for between 4 and 8 days. In upwelling source water, mean chlorophyll a concentrations were typically low (0.7 mg.m -3 ) and nutrient concentrations were high (nitrates, silicates and phosphates were 20.8, 16.6 and 1.88 mmol.m -3 respectively). Along the drogue tracks nutrients decreased rapidly in the euphotic zone as chlorophyll increased to peak at concentrations of up to 26 mg.m -3 . Elemental changes in nitrates, silicates, phosphates and oxygen were used to estimate primary productivity. These 'Redfield productivity estimates' were similar to 14 C-uptake productivity but lower than estimates obtained from changes in particle volume. Daily rates of 14 C-uptake water column productivity ranged between 0.94 and 14.01 g C.m -2 .d -1 (mean 3.80 g C.m -2 .d -1 ) and were similar to or higher than productivity estimates reported for other upwelling areas. Phytoplankton biomass in the upper 50 metres ranged between 8 and 506 mg chll a. m -2 (mean 208 mg chll a.m -2 ). The temporal scale of phytoplankton bloom development was investigated in terms of changes in chlorophyll a concentrations in the euphotic zone. The build up and decline of the primary phytoplankton (diatom) bloom in newly upwelled water occurred within 6-8 days. The initiation of blooming was controlled by the stability of the water body. The decline of the bloom was associated with reduced nutrient levels and is considered to result mainly from phytoplankton cells sinking out of the surface layers

  2. Interactions between trophic levels in upwelling and non-upwelling regions during summer monsoon

    Digital Repository Service at National Institute of Oceanography (India)

    Malik, A; Fernandes, C.E.G.; Gonsalves, M.J.B.D.; Subina, N.S.; Mamatha, S.S.; Krishna, K.S.; Varik, S.; RituKumari; Gauns, M.; Cejoice, R.P.; Pandey, S.S.; Jineesh, V.K.; Kamaleson, A; Vijayan, V.; Mukherjee, I.; Subramanyan, S.; Nair, S.; Ingole, B.S.; LokaBharathi, P.A

    Coastal upwelling is a regular phenomenon occurring along the southwest coast of India during summer monsoon (May–September). We hypothesize that there could be a shift in environmental parameters along with changes in the network of interactions...

  3. Changes in the partial pressure of carbon dioxide in the Mauritanian–Cap Vert upwelling region between 2005 and 2012

    Directory of Open Access Journals (Sweden)

    M. González-Dávila

    2017-08-01

    Full Text Available Coastal upwellings along the eastern margins of major ocean basins represent regions of large ecological and economic importance due to the high biological productivity. The role of these regions for the global carbon cycle makes them essential in addressing climate change. The physical forcing of upwelling processes that favor production in these areas are already being affected by global warming, which will modify the intensity of upwelling and, consequently, the carbon dioxide cycle. Here, we present monthly high-resolution surface experimental data for temperature and partial pressure of carbon dioxide in one of the four most important upwelling regions of the planet, the Mauritanian–Cap Vert upwelling region, from 2005 to 2012. This data set provides direct evidence of seasonal and interannual changes in the physical and biochemical processes. Specifically, we show an upwelling intensification and an increase of 0.6 Tg yr−1 in CO2 outgassing due to increased wind speed, despite increased primary productivity. This increase in CO2 outgassing together with the observed decrease in sea surface temperature at the location of the Mauritanian Cap Blanc, 21° N, produced a pH rate decrease of −0.003 ± 0.001 yr−1.

  4. Shifts between gelatinous and crustacean plankton in a coastal upwelling region

    OpenAIRE

    Bode, Antonio; Álvarez-Ossorio, Maria Teresa; Miranda, Ana; Ruiz-Villarreal, Manuel

    2013-01-01

    proyectos RADIALES (IEO) y EURO-BASIN (Ref. 264933, 7FP) Variability in the dominance of copepods vs. gelatinous plankton was analysed using monthly time-series covering the last 55 years and related to changes in climatic, oceanographic, and fishery conditions in the upwelling region of Galicia (NW Spain). Seasonality was generally the main component of variability in all groups, both along the coast and in the nearby ocean, but no common long-term trend was found. Coastal copepo...

  5. Coastal upwelling along the southwest coast of India – ENSO modulation

    Directory of Open Access Journals (Sweden)

    K. Muni Krishna

    2008-06-01

    Full Text Available An index of El Niño Southern Oscillation (ENSO in the Pacific during pre monsoon season is shown to account for a significant part of the variability of coastal Sea Surface Temperature (SST anomalies measured a few months later within the wind driven southwest coast of India coastal upwelling region 7° N–14° N. This teleconnection is thought to result from an atmospheric bridge between the Pacific and north Indian Oceans, leading to warm (cold ENSO events being associated with relaxation (intensification of the Indian trade winds and of the wind-induced coastal upwelling. This ENSO related modulation of the wind-driven coastal upwelling appears to contribute to the connection observed at the basin-scale between ENSO and SST in the Arabian Sea. The ability to use this teleconnection to give warning of large changes in the southwest coast of India coastal upwelling few months in advance is successfully tested using data from 1998 and 1999 ENSO events.

  6. Climate change and ocean deoxygenation within intensified surface-driven upwelling circulations.

    Science.gov (United States)

    Bakun, Andrew

    2017-09-13

    Ocean deoxygenation often takes place in proximity to zones of intense upwelling. Associated concerns about amplified ocean deoxygenation arise from an arguable likelihood that coastal upwelling systems in the world's oceans may further intensify as anthropogenic climate change proceeds. Comparative examples discussed include the uniquely intense seasonal Somali Current upwelling, the massive upwelling that occurs quasi-continuously off Namibia and the recently appearing and now annually recurring 'dead zone' off the US State of Oregon. The evident 'transience' in causal dynamics off Oregon is somewhat mirrored in an interannual-scale intermittence in eruptions of anaerobically formed noxious gases off Namibia. A mechanistic scheme draws the three examples towards a common context in which, in addition to the obvious but politically problematic remedy of actually reducing 'greenhouse' gas emissions, the potentially manageable abundance of strongly swimming, finely gill raker-meshed small pelagic fish emerges as a plausible regulating factor.This article is part of the themed issue 'Ocean ventilation and deoxygenation in a warming world'. © 2017 The Author(s).

  7. Windows Server 2012 R2 administrator cookbook

    CERN Document Server

    Krause, Jordan

    2015-01-01

    This book is intended for system administrators and IT professionals with experience in Windows Server 2008 or Windows Server 2012 environments who are looking to acquire the skills and knowledge necessary to manage and maintain the core infrastructure required for a Windows Server 2012 and Windows Server 2012 R2 environment.

  8. Studsvik's R2 reactor - Review of activities

    Energy Technology Data Exchange (ETDEWEB)

    Grounes, Mikael; Tomani, Hans; Graeslund, Christian; Rundquist, Hans; Skoeld, Kurt [Studsvik Nuclear AB, Nykoeping (Sweden)

    1993-07-01

    A general description of the R2 reactor, its associated facilities and its history is given. The facilities and range of work are described for the following types of activities: fuel testing, materials testing, neutron transmutation doping of silicon, activation analysis, radioisotope production and basic research including thermal neutron scattering, nuclear chemistry and neutron capture radiography. (author)

  9. Hydrography of the Wadge bank - premonsoon and monsoon seasons

    Digital Repository Service at National Institute of Oceanography (India)

    RamaRaju, V.S.; Rao, T.V.N.; RameshBabu, V.; Anto, A.F.

    The hydrography of the Wadge Bank during premonsoon and monsoon seasons is presented. The thermocline slopes downward towards the central region. Upwelling is prominent in the entire region during monsoon and is observed only in the western...

  10. Mastering Windows Server 2012 R2

    CERN Document Server

    Minasi, Mark; Booth, Christian; Butler, Robert; McCabe, John; Panek, Robert; Rice, Michael; Roth, Stefan

    2013-01-01

    Check out the new Hyper-V, find new and easier ways to remotely connect back into the office, or learn all about Storage Spaces-these are just a few of the features in Windows Server 2012 R2 that are explained in this updated edition from Windows authority Mark Minasi and a team of Windows Server experts led by Kevin Greene. This book gets you up to speed on all of the new features and functions of Windows Server, and includes real-world scenarios to put them in perspective. If you're a system administrator upgrading to, migrating to, or managing Windows Server 2012 R2, find what you need to

  11. R2 inflation in anisotropic universes

    International Nuclear Information System (INIS)

    Berkin, A.L.

    1990-01-01

    The evolution of Bianchi type-I and type-IX universes for a theory of gravity with an εR 2 term added to the usual Lagrangian is considered. As in the spatially flat Robertson-Walker case considered previously by others, inflation is found to occur. For any amount of initial anisotropy, the anisotropy decays quickly relative to the length of the inflationary epoch, and the amount of expansion is enhanced by the anisotropy. The exceptions are Bianchi type-IX universes near or at isotropy. In these cases a wide range of initial parameters causes the universe to recollapse, thus reducing the phase space in which inflation can occur. The diagonal metric is shown to be the most general form in the R 2 theory for both Bianchi type-I universes with a perfect fluid and vacuum Bianchi type-IX models

  12. Hot-spots of primary productivity: An Alternative interpretation to Conventional upwelling models

    Science.gov (United States)

    van Ruth, Paul D.; Ganf, George G.; Ward, Tim M.

    2010-12-01

    The eastern Great Australian Bight (EGAB) forms part of the Southern and Indian Oceans and is an area of high ecological and economic importance. Although it supports a commercial fishery, quantitative estimates of the primary productivity underlying this industry are open to debate. Estimates range from 500 mg C m -2 day -1. Part of this variation may be due to the unique upwelling circulation of shelf waters in summer/autumn (November-April), which shares some similarities with highly productive eastern boundary current upwelling systems, but differs due to the influence of a northern boundary current, the Flinders current, and a wide continental shelf. This study examines spatial variations in primary productivity in the EGAB during the upwelling seasons of 2005 and 2006. Daily integral productivity calculated using the vertically generalised production model (VGPM) showed a high degree of spatial variation. Productivity was low (modelled with the VGPM, which uses surface measures of phytoplankton biomass to calculate productivity. Macro-nutrient concentrations could not be used to explain the difference in the low and high productivities (silica > 1 μmol L -1, nitrate/nitrite > 0.4 μmol L -1, phosphate > 0.1 μmol L -1). Mixing patterns or micro-nutrient concentrations are possible explanations for spatial variations in primary productivity in the EGAB. On a global scale, daily rates of primary productivity of the EGAB lie between the highly productive eastern boundary current upwelling systems, and less productive coastal regions of western and south eastern Australia, and the oligotrophic ocean. However, daily productivity rates in the upwelling hotspots of the EGAB rival productivities in Benguela and Humboldt currents.

  13. Initial observation of upwelling along east coast of Peninsular Malaysia musica-gratis.softonic.it/ >musica gratis

    Science.gov (United States)

    Akhir, M.; Tanggang, F.

    2013-12-01

    There is no published evidence of upwelling in coastal area along the east coast of Peninsular Malaysia. However numbers of recent cruise data collected during the southwest monsoon found features of thermocline lifting and isolated cooler temperature water along the coast, These sign was observed along the 104°E from numbers of parallel transects. To confirm the presence of upwelling, satellite remote sensing data was used, and numerical model experiments were conducted. Cooler sea-surface temperature along the coast was observed from both in-situ and satellite data, while upward movement in the vertical profiles agreed with the location of upwelling from both in-situ and satellite data. Moreover, these data also show that the upwelled water band along the 104°E longitude stretch approximately 650 km long. Initially, southwesterly wind during this season is believed to be the important mechanism that contributed to this wind-induced Ekman upwelling. musica-gratis.softonic.it/ >musica gratis

  14. Bowhead whale body condition and links to summer sea ice and upwelling in the Beaufort Sea

    Science.gov (United States)

    George, John C.; Druckenmiller, Matthew L.; Laidre, Kristin L.; Suydam, Robert; Person, Brian

    2015-08-01

    We examined the response of bowhead whale (Balaena mysticetus) body condition to summer sea ice conditions and upwelling-favorable winds. We used a long-term dataset collected from whales of the Bering-Chukchi-Beaufort Seas (BCB) stock to estimate various body condition indices (BCI's) for individual whales that were harvested by Alaskan Eskimos. A series of offshore regions frequented by bowhead whales in summer were delineated and used to quantify interannual summertime environmental conditions including: (a) mean open water fraction, (b) duration of melt season, (c) date of continuous freeze-up, and (d) mean upwelling-favorable wind stress. Body condition was analyzed relative to these metrics for both the preceding summer feeding season and the previous three seasons combined. Our analysis indicates a significant increase in the long-term trend in an axillary girth-based body condition index (BCIG) over the study period (1989-2011). The increase in BCIG is likely associated with the trend in overall reduction of sea ice, including increased duration of open water, changes in upwelling potential (wind stress), and possibly higher primary production in the Pacific Arctic marine ecosystem favoring water-column invertebrates. We found strong significant positive correlations between BCIG and late summer open water fraction in the Beaufort Sea and smaller nearshore areas off the Mackenzie Delta and west of Banks Island. Additionally, BCIG was positively and significantly correlated with duration of melt season, later date of freeze-up in the Beaufort Sea, and upwelling-favorable winds on the Mackenzie shelf and west of Banks Island. A strong seasonal difference in BCI's was noted for subadult bowheads, presumably associated with summer feeding; however, yearlings were found to drop in BCI over at least the first summer after weaning. Our results indicate an overall increase in bowhead whale body condition and a positive correlation with summer sea ice loss over the

  15. Variabilidad estacional de cadmio en un sistema de surgencia costera del norte de Chile (Bahía Mejillones del Sur, 23° S Seasonal variability of cadmium in a coastal upwelling system off northern Chile (Mejillones bay, 23° S

    Directory of Open Access Journals (Sweden)

    JORGE VALDÉS

    2006-12-01

    observada en esta razón pueden ser explicados ya sea por una mayor eficiencia en la remoción de PO4 que de Cadmio en las aguas superficiales o una mayor remineralización de cadmio en las aguas subsuperficialesTotal and dissolved cadmium were measured from surface to 100 m water depth, between June 2002 and April 2003, in Mejillones bay. Total and dissolved cadmium range concentration was 0.41-10.7 and 0.08-1.61 nM, respectively. Cadmium profiles and water structure were used to study seasonal variability patterns of this metal in this upwelling system. Oceanographic conditions during this period correspond to a normal (non-El Niño year. Water masses present in this bay correspond to subantartic superficial water, subtropical superficial water and Equatorial subsuperficial water with different degree of mixture and stratification during sampling period. Cadmium profiles showed a classic nutrient-type distribution. Whereas some differences in this profiles could be attributed to a water masses mixing condition into the bay. Multivariate analysis indicates that temporal cadmium variations were associated with chlorophyll-a concentration and temperature fluctuation, indicating that, at this temporal resolution, phytoplanktonic biomass production is the principal factor controlling cadmium concentration in surface waters of Mejillones bay. By other hand, in spite of cadmium being a redox-sensitive metal, any significant influence of dissolved oxygen on this metal were founded, thus microxic condition of bottom water of Mejillones bay is not the principal factor that promotes cadmium flux to the sediments. Cd/PO4 ratio is in agreement with normal values reported for the Chilean coast, and its low values, compared with the northeast Pacific coast, can be explained either by the fact that PO4 is more efficiently removed than cadmium from the surface layer, or that cadmium remineralization is occurring much faster than in the case of PO4

  16. R2 dark energy in the laboratory

    Science.gov (United States)

    Brax, Philippe; Valageas, Patrick; Vanhove, Pierre

    2018-05-01

    We analyze the role, on large cosmological scales and laboratory experiments, of the leading curvature squared contributions to the low-energy effective action of gravity. We argue for a natural relationship c0λ2≃1 at low energy between the R2 coefficients c0 of the Ricci scalar squared term in this expansion and the dark energy scale Λ =(λ MPl)4 in four-dimensional Planck mass units. We show how the compatibility between the acceleration of the expansion rate of the Universe, local tests of gravity and the quantum stability of the model all converge to select such a relationship up to a coefficient which should be determined experimentally. When embedding this low-energy theory of gravity into candidates for its ultraviolet completion, we find that the proposed relationship is guaranteed in string-inspired supergravity models with modulus stabilization and supersymmetry breaking leading to de Sitter compactifications. In this case, the scalar degree of freedom of R2 gravity is associated to a volume modulus. Once written in terms of a scalar-tensor theory, the effective theory corresponds to a massive scalar field coupled with the universal strength β =1 /√{6 } to the matter stress-energy tensor. When the relationship c0λ2≃1 is realized, we find that on astrophysical scales and in cosmology the scalar field is ultralocal and therefore no effect arises on such large scales. On the other hand, the scalar field mass is tightly constrained by the nonobservation of fifth forces in torsion pendulum experiments such as Eöt-Wash. It turns out that the observation of the dark energy scale in cosmology implies that the scalar field could be detectable by fifth-force experiments in the near future.

  17. Ekman estimates of upwelling at cape columbine based on ...

    African Journals Online (AJOL)

    Ekman estimates of upwelling at cape columbine based on measurements of longshore wind from a 35-year time-series. AS Johnson, G Nelson. Abstract. Cape Columbine is a prominent headland on the south-west coast of Africa at approximately 32°50´S, where there is a substantial upwelling tongue, enhancing the ...

  18. Coastal Upwelling Drives Intertidal Assemblage Structure and Trophic Ecology.

    Science.gov (United States)

    Reddin, Carl J; Docmac, Felipe; O'Connor, Nessa E; Bothwell, John H; Harrod, Chris

    2015-01-01

    Similar environmental driving forces can produce similarity among geographically distant ecosystems. Coastal oceanic upwelling, for example, has been associated with elevated biomass and abundance patterns of certain functional groups, e.g., corticated macroalgae. In the upwelling system of Northern Chile, we examined measures of intertidal macrobenthic composition, structure and trophic ecology across eighteen shores varying in their proximity to two coastal upwelling centres, in a hierarchical sampling design (spatial scales of >1 and >10 km). The influence of coastal upwelling on intertidal communities was confirmed by the stable isotope values (δ13C and δ15N) of consumers, including a dominant suspension feeder, grazers, and their putative resources of POM, epilithic biofilm, and macroalgae. We highlight the utility of muscle δ15N from the suspension feeding mussel, Perumytilus purpuratus, as a proxy for upwelling, supported by satellite data and previous studies. Where possible, we used corrections for broader-scale trends, spatial autocorrelation, ontogenetic dietary shifts and spatial baseline isotopic variation prior to analysis. Our results showed macroalgal assemblage composition, and benthic consumer assemblage structure, varied significantly with the intertidal influence of coastal upwelling, especially contrasting bays and coastal headlands. Coastal topography also separated differences in consumer resource use. This suggested that coastal upwelling, itself driven by coastline topography, influences intertidal communities by advecting nearshore phytoplankton populations offshore and cooling coastal water temperatures. We recommend the isotopic values of benthic organisms, specifically long-lived suspension feeders, as in situ alternatives to offshore measurements of upwelling influence.

  19. Upwelling features near Sri Lanka in the Bay of Bengal

    Digital Repository Service at National Institute of Oceanography (India)

    ShreeRam, P.; Rao, L.V.G.

    , the southwest monsoon in summer and the northeast monsoon in winter. The wind stress associated with these winds cause mass drift of oceanic waters leading to upwelling and downwelling. The upwelling features in the Bay of Bengal with a special mention about...

  20. Ecological features of harmful algal blooms in coastal upwelling ...

    African Journals Online (AJOL)

    The mass mortalities that accompany anoxia, common to the Benguela and Peru upwelling systems, may be a trophic control mechanism to maintain biogeochemical balance and regional homeostasis, which are vital to upwelling ecosystem dynamics. Some traditional concepts of phytoplankton ecology may not completely

  1. Near-surface temperature gradient in a coastal upwelling regime

    Science.gov (United States)

    Maske, H.; Ochoa, J.; Almeda-Jauregui, C. O.; Ruiz-de la Torre, M. C.; Cruz-López, R.; Villegas-Mendoza, J. R.

    2014-08-01

    In oceanography, a near homogeneous mixed layer extending from the surface to a seasonal thermocline is a common conceptual basis in physics, chemistry, and biology. In a coastal upwelling region 3 km off the coast in the Mexican Pacific, we measured vertical density gradients with a free-rising CTD and temperature gradients with thermographs at 1, 3, and 5 m depths logging every 5 min during more than a year. No significant salinity gradient was observed down to 10 m depth, and the CTD temperature and density gradients showed no pronounced discontinuity that would suggest a near-surface mixed layer. Thermographs generally logged decreasing temperature with depth with gradients higher than 0.2 K m-1 more than half of the time in the summer between 1 and 3 m, 3 and 5 m and in the winter between 1 and 3 m. Some negative temperature gradients were present and gradients were generally highly variable in time with high peaks lasting fractions of hours to hours. These temporal changes were too rapid to be explained by local heating or cooling. The pattern of positive and negative peaks might be explained by vertical stacks of water layers of different temperatures and different horizontal drift vectors. The observed near-surface gradient has implications for turbulent wind energy transfer, vertical exchange of dissolved and particulate water constituents, the interpretation of remotely sensed SST, and horizontal wind-induced transport.

  2. Macro-Scale Patterns in Upwelling/Downwelling Activity at North American West Coast.

    Directory of Open Access Journals (Sweden)

    Romeo Saldívar-Lucio

    Full Text Available The seasonal and interannual variability of vertical transport (upwelling/downwelling has been relatively well studied, mainly for the California Current System, including low-frequency changes and latitudinal heterogeneity. The aim of this work was to identify potentially predictable patterns in upwelling/downwelling activity along the North American west coast and discuss their plausible mechanisms. To this purpose we applied the min/max Autocorrelation Factor technique and time series analysis. We found that spatial co-variation of seawater vertical movements present three dominant low-frequency signals in the range of 33, 19 and 11 years, resembling periodicities of: atmospheric circulation, nodal moon tides and solar activity. Those periodicities might be related to the variability of vertical transport through their influence on dominant wind patterns, the position/intensity of pressure centers and the strength of atmospheric circulation cells (wind stress. The low-frequency signals identified in upwelling/downwelling are coherent with temporal patterns previously reported at the study region: sea surface temperature along the Pacific coast of North America, catch fluctuations of anchovy Engraulis mordax and sardine Sardinops sagax, the Pacific Decadal Oscillation, changes in abundance and distribution of salmon populations, and variations in the position and intensity of the Aleutian low. Since the vertical transport is an oceanographic process with strong biological relevance, the recognition of their spatio-temporal patterns might allow for some reasonable forecasting capacity, potentially useful for marine resources management of the region.

  3. Quantifying the impact of an upwelling filament on the physical-chemical-biological interactions off SW Iberia

    Science.gov (United States)

    Cravo, A.; Sanchez, R.; Monteiro, C.; Cardeira, S.; Madureira, M.; Rita, F.; Relvas, P.

    2017-12-01

    Upwelling filaments are mesoscale structures of cold water that stretch seaward in a tongue-like shape with origin in the coastal upwelling zone. Filaments off the Iberian Peninsula are recurrent, showing similarities with those in the Californian coast. The Cape São Vicente, the SW tip of the Iberian Peninsula, is the root of recurrent filaments observed in the satellite imagery during the upwelling season. However, the understanding of its physical and chemical impact on the biological productivity is rather limited. There, a relatively small filament ( 80 km long) was investigated through remote sensing and in situ multidisciplinary observations during an upwelling favourable wind relaxation event, but just after an intense upwelling period. A total of 42 CTD+Rosette casts up to 400 m depth were distributed on an almost regular grid of 15 km mean spacing guided by guided by satellite SST imagery transmitted to the ship in near-real time. The parameters sampled during the sea campaign included: velocity field sampled along the ship track through a hull-mounted 38 kHz RDI ADCP, meteorological variables, temperature, salinity, chlorophyll a, dissolved oxygen, nitrate, phosphate, silicate, cadmium, lead and zinc. The extent of the impact of the filament was evaluated by quantifying the cross-shelf transports of several properties. The amounts conveyed by the filament were much stronger than those expected by the wind-driven Ekman mechanism, showing that it represents an efficient feature for the exchange of water, dissolved and particulate matter from the productive shelf towards the oligotrophic offshore region. Considering the periods of strong upwelling events and the extent of their duration along the year, the amounts of exported matter will certainly enhance the biological productivity of these waters, including its fisheries. These filament data contribute to better understand the physical-chemical-biological interactions of this regional ecosystem.

  4. The Triassic upwelling system of Arctic Alaska

    Science.gov (United States)

    Yurchenko, I.; Graham, S. A.

    2017-12-01

    The Middle to Upper Triassic Shublik Formation of Arctic Alaska is a laterally and vertically heterogeneous rock unit that has been analyzed both in outcrop and in the subsurface. The Shublik Formation sediments are distinguished by a characteristic set of lithologies that include glauconitic, phosphatic, organic-rich, and cherty facies consistent with a coastal upwelling zone deposition interpretation. It is often recognized by abundance of impressions and shells of distinctive Triassic bivalves. To understand main controls on lithofacies distributions, this study reviews and refines lithologic and paleoenvironmental interpretations of the Shublik Formation, and incorporates the newly acquired detailed geochemical analyses of two complete Shublik cores. This work focuses on organic geochemistry (analyses of biomarkers and diamondoids), chemostratigraphy (hand-held XRF), and iron speciation analysis to reconstruct paleoproductivity and redox conditions. Based on the available evidence, during Shublik deposition, an upwelling-influenced open shelf resulted in high nutrient supply that stimulated algal blooms leading to high net organic productivity, reduced water transparency, oxygen deficiency, and water column stratification. Evidence of such eutrophic conditions is indicated by the lack of photic benthic organisms, bioturbation and trace fossils, and dominance of the monospecific light-independent epibenthic bivalves. The flat, subcircular, thin shells of these carbonate-secreting organisms allowed them to adapt to dysoxic conditions, and float on soft, soupy, muddy substrate. The distinctive clay- and organic-rich facies with abundant bivalves occurred on the mid to outer stable broad shelf, and were deposited when organic productivity at times overlapped with periods of increased siliciclastic input controlled by sea level and changes in local sediment dispersal systems, and therefore are more spatially and temporally localized than the widespread clay

  5. Biological and oceanographic upwelling indicators at Cabo Frio (RJ

    Directory of Open Access Journals (Sweden)

    Gleyci A. O. Moser

    1997-01-01

    Full Text Available Phytoplankton biomass, chemical parameters and hydrology were studied in a transect 101.6 km long off Cabo Frio (RJ, Southeast Brazil, during summer (December 29 to 31, 1991 and winter (June 27 to 30, 1992. Wind induced upwelling events are frequently observed in the area during summer, becoming rare during winter. By the summer cruise a bloom of phytoplankton was observed in surface, close to the coast, with chlorophyll concentrations reaching 25.55 mg Chl-a m-3, uncoupled from the cold, nutrient rich waters of South Atlantic Central Water (SACW, found below 40 m depth. During the winter cruise, the SACW raised at the surface waters in front of Cabo Frio depicting an upwelling event. However, in spite of high surface nitrate concentrations (up to 7.7 f.1M chlorophyll-a were lower than 2 mg Chl-a m-3. The phytoplankton biomass, meteorological and hydrological data suggest a probable upwelling event immediately before the summer cruise, and an ongoing one during winter time. Cluster analyses and principal component analyses (PCA were applied to summer and winter data, pointing out multidimensional fronts in the area during both seasons.A biomassa fitoplanctônica, parâmetros químicos e hidrologia foram estudadas em um transecto de 101,6 Km ao largo de Cabo Frio, (RJ Brasil, durante o verão (Dezembro 29 a 31, 1991 e inverno (Junho 27 a 30, 1992. Nesta área, eventos de ressurgência induzidos pelo vento são comuns durante o verão, tornando-se mais raros durante o inverno. Durante o período de verão uma floração de fitoplâncton foi observada na superfície próximo ao continente, apresentando um máximo de clorofila-a igual a 25,55 mg Cl-a m'3 desacoplado das águas frias e ricas em nutrientes da Água Central do Atlântico Sul (ACAS, presente abaixo de 40 m. Durante o inverno, a ACAS alcançou a superflcie em frente a Cabo Frio, caracterizando um evento de ressurgência. Entretanto, apesar das altas concentrações de nitrato na superf

  6. Biological production in the Indian Ocean upwelling zones - Part 1: refined estimation via the use of a variable compensation depth in ocean carbon models

    Science.gov (United States)

    Geethalekshmi Sreeush, Mohanan; Valsala, Vinu; Pentakota, Sreenivas; Venkata Siva Rama Prasad, Koneru; Murtugudde, Raghu

    2018-04-01

    Biological modelling approach adopted by the Ocean Carbon-Cycle Model Intercomparison Project (OCMIP-II) provided amazingly simple but surprisingly accurate rendition of the annual mean carbon cycle for the global ocean. Nonetheless, OCMIP models are known to have seasonal biases which are typically attributed to their bulk parameterisation of compensation depth. Utilising the criteria of surface Chl a-based attenuation of solar radiation and the minimum solar radiation required for production, we have proposed a new parameterisation for a spatially and temporally varying compensation depth which captures the seasonality in the production zone reasonably well. This new parameterisation is shown to improve the seasonality of CO2 fluxes, surface ocean pCO2, biological export and new production in the major upwelling zones of the Indian Ocean. The seasonally varying compensation depth enriches the nutrient concentration in the upper ocean yielding more faithful biological exports which in turn leads to accurate seasonality in the carbon cycle. The export production strengthens by ˜ 70 % over the western Arabian Sea during the monsoon period and achieves a good balance between export and new production in the model. This underscores the importance of having a seasonal balance in the model export and new productions for a better representation of the seasonality of the carbon cycle over upwelling regions. The study also implies that both the biological and solubility pumps play an important role in the Indian Ocean upwelling zones.

  7. Center type performance of differentiable vector fields in R2

    International Nuclear Information System (INIS)

    Rabanal, Roland

    2007-08-01

    Let X : R 2 / D → R 2 be a differentiable vector field, where D is compact. If the eigenvalues of the jacobian matrix DX z are (nonzero) purely imaginary, for all z element of R 2 / D . Then, X + v has a center type performance at infinity, for some v element of R 2 . More precisely, X + v has a periodic trajectory Γ subset of R2/ D which is surrounding D such that in the unbounded component of (R 2 / D )/ Γ all the trajectories of X + v are nontrivial cycles. In the case of global vector fields Y : R 2R 2 with Y (0) = 0, we prove that such eigenvalue condition implies the topological equivalency of Y with the linear vector field (x, y) → (-y, x). (author)

  8. Multicenter R2* mapping in the healthy brain

    DEFF Research Database (Denmark)

    Ropele, Stefan; Wattjes, Mike P; Langkammer, Christian

    2014-01-01

    structures. METHODS: R2* mapping was performed in 81 healthy subjects in seven centers using different 3 T systems. R2* was calculated from a dual-echo gradient echo sequence and was assessed in several deep gray matter structures. The inter-scanner and inter-subject variability of R2* was calculated...

  9. Upwelling systems in eastern boundary currents have been ...

    African Journals Online (AJOL)

    spamer

    Differences are found in the location of return, onshore flow. .... eastern boundary currents, downstream of the west wind drift ... show maximum upwelling conditions (equatorward winds) in ..... The work of PTS and CJ was supported by Grant.

  10. Upwelling filaments are cold, typically narrow features in surface ...

    African Journals Online (AJOL)

    spamer

    They are defined by strong ... transporting coastally upwelled water to the deep ... surface temperature anomaly up to 2°C. The cool temperature signal was restricted to a shallow surface ... towards the important process of exchanges between.

  11. Abyssal Upwelling and Downwelling and the role of boundary layers

    Science.gov (United States)

    McDougall, T. J.; Ferrari, R. M.

    2016-02-01

    The bottom-intensified mixing activity arising from the interaction of internal tides with bottom topography implies that the dianeutral advection in the ocean interior is downwards, rather than upwards as is required by continuity. The upwelling of Bottom Water through density surfaces in the deep ocean is however possible because of the sloping nature of the sea floor. A budget study of the abyss (deeper than 2000m) will be described that shows that while the upwelling of Bottom Water might be 25 Sv, this is achieved by very strong upwelling in the bottom turbulent boundary layer (of thickness 50m) of 100 Sv and strong downwelling in the ocean interior of 75 Sv. This downwelling occurs within 10 degrees of longitude of the continental boundaries. This near-boundary confined strong upwelling and downwelling clearly has implications for the Stommel-Arons circulation.

  12. The Benguela upwelling system lying off southern Africa's west ...

    African Journals Online (AJOL)

    spamer

    Africa's west coast is one of the world's four main upwelling ..... Regions of current shear, convergence and divergence, as well ..... between Cape Point and Danger Point in 1975. .... processes in relation to eastern boundary current pelagic.

  13. The Benguela upwelling ecosystem lies adjacent to the south ...

    African Journals Online (AJOL)

    denise

    The Benguela upwelling ecosystem lies adjacent to the south-western coast of Africa, from southern Angola. (15°S) to Cape Agulhas (35°S; Fig. 1). Ecologically, it is split into separate northern and southern sub- systems by a zone of intense perennial upwelling near. Lüderitz (26–27.5°S; Shannon 1985). As is charac-.

  14. Pliocene Warm Period Upwelling in the Southern Benguela Region

    Science.gov (United States)

    Petrick, B. F.; McClymont, E.; Felder, S.; Leng, M. J.; Rosell Mele, A.; Rueda, G.

    2014-12-01

    The mid-Pliocene has been proposed as a possible analogue for understanding future climate change and testing climate models. Previous work has shown that during the Pliocene the major upwelling systems were relatively warm, and thus either inactive, contracted, or upwelling warmer waters than present. Here we examine evidence from a core site located on the margins of the modern Benguela upwelling system, to test whether the upwelling cells had migrated or contracted relative to present during the Pliocene. We applied several organic geochemistry proxies and foraminiferal analyses to reconstruct the Pliocene history of ODP site 1087 (31º28'S, 15º19'E, 1374m water depth), including the UK37' index and TEX86 index (for reconstructing sea surface temperatures), chlorins (for estimating primary productivity) and planktonic foraminifera assemblages (for inferring water mass changes). These proxies show that between 3.5 and 3.0 Ma the southern Benguela region was significantly cooler than the northern Benguela region, the latter where the main upwelling cells are found today. Coupled with higher primary production, a shift in planktonic foraminifera assemblage, and an offset between the UK37' index and TEX86 index, we infer that more extensive upwelling was present in the southern Benguela region during the Pliocene. We infer that the main Benguela upwelling cells had shifted southward relative to today, as a result of changes in the local wind field. We find evidence for pronounced cooling and a shift in the planktonic foraminifera assemblage during the M2 and KM2 glacial stages, showing a sensitivity of Benguela upwelling to these short-lived climate events.

  15. Safe dismantling of the SVAFO research reactors R2 and R2-0 in Sweden

    International Nuclear Information System (INIS)

    ARNOLD, Hans-Uwe; BROY, Yvonne; Dirk Schneider

    2017-01-01

    The R2 and R2-0 reactors were part of the Swedish government's research program on nuclear power from the early 1960's. Both reactors were shut down in 2005 following a decision by former operator Studsvik Nuclear AB. The decommissioning of the R2 and R2-0 reactors is divided into three phases. The first phase - awarded to AREVA - involved dismantling of the reactors and associated systems in the reactor pool, treatment of the disassembled components as well as draining, cleaning and emptying the pool. In the second phase, the pool structure itself will be dismantled, while removal of remaining reactor systems, treatment and disposal of materials and clean-up will be carried out in the third stage. The entire work is planned to be completed before the end of this decade. The paper describes the several steps of phase 1 - starting with the team building, followed by the dismantling operations and covers challenges encountered and lessons learned as well. The reactors consist of 5.400 kg aluminum, 6.000 kg stainless steel restraint structures as well as, connection elements of the mostly flanged components (1.000 kg). The most demanding - from a radiological point of view - was the R2-0 reactor that was limited to ∼ 1 m"3 construction volumes but with an extremely heterogeneous activation profile. Based on the calculated radiological entrance data and later sampling, nuclide vectors for both reactors depending on the real placement of the single component and on the material (aluminum and stainless steel) were created. Finally, for the highest activated component from R2 reactor, 85 Sv/h were measured. The dismantling principles - adopted on a safety point of view - were the following: The always protected base area of the ponds served as a flexible buffer area for waste components and packaging. Specific protections were also installed on the walls to protect them from mechanical stress which may occur during dismantling work. A specific work platform was

  16. Coastal upwelling linked to toxic Pseudo-nitzschia australis blooms in Los Angeles coastal waters, 2005-2007

    KAUST Repository

    Schnetzer, Astrid; Jones, Burton; Schaffner, Rebecca A.; Cetinić, Ivona; Fitzpatrick, Elizabeth; Miller, Peter E.; Seubert, Erica L.; Caron, David A.

    2013-01-01

    Harmful algal blooms dominated by the diatom Pseudo-nitzschia spp. have become a perennial but variable event within surface waters near the greater Los Angeles area. Toxic blooms during spring seasons from 2005 to 2007 varied strongly in their overall toxicity and duration. Differences in bloom dynamics were linked to differences in storm-induced river discharge following episodic rain events and coastal upwelling, both major coastal processes that led to the injection of nutrients into coastal surface waters. Heavy river runoff during early 2005, a record-rainfall year, favored a phytoplankton community mainly comprised of algal taxa other than Pseudo-nitzschia. The spring bloom during 2005 was associated with low domoic acid surface concentrations and minor contributions of (mainly) P. delicatissima to the diatom assemblage. In contrast, highly toxic P. australis-dominated blooms during spring seasons of 2006 and 2007 were linked to strong upwelling events. River discharge quotas in 2006 and 2007, in contrast to 2005, fell well below annual averages for the region. Surface toxin levels were linked to colder, more saline (i.e. upwelled) water over the 3-year study, but no such consistent relationship between domoic acid levels and other physiochemical parameters, such as macronutrient concentrations or nutrient ratios, was observed. © The Author 2013. Published by Oxford University Press. All rights reserved.

  17. Coastal upwelling linked to toxic Pseudo-nitzschia australis blooms in Los Angeles coastal waters, 2005-2007

    KAUST Repository

    Schnetzer, Astrid

    2013-06-10

    Harmful algal blooms dominated by the diatom Pseudo-nitzschia spp. have become a perennial but variable event within surface waters near the greater Los Angeles area. Toxic blooms during spring seasons from 2005 to 2007 varied strongly in their overall toxicity and duration. Differences in bloom dynamics were linked to differences in storm-induced river discharge following episodic rain events and coastal upwelling, both major coastal processes that led to the injection of nutrients into coastal surface waters. Heavy river runoff during early 2005, a record-rainfall year, favored a phytoplankton community mainly comprised of algal taxa other than Pseudo-nitzschia. The spring bloom during 2005 was associated with low domoic acid surface concentrations and minor contributions of (mainly) P. delicatissima to the diatom assemblage. In contrast, highly toxic P. australis-dominated blooms during spring seasons of 2006 and 2007 were linked to strong upwelling events. River discharge quotas in 2006 and 2007, in contrast to 2005, fell well below annual averages for the region. Surface toxin levels were linked to colder, more saline (i.e. upwelled) water over the 3-year study, but no such consistent relationship between domoic acid levels and other physiochemical parameters, such as macronutrient concentrations or nutrient ratios, was observed. © The Author 2013. Published by Oxford University Press. All rights reserved.

  18. Determination of the Anthropogenic Carbon Signal to the Total Change in Dissolved Carbon in the Coastal Upwelling Region Along the Washington-Oregon-California Continental Margin

    Science.gov (United States)

    Feely, R. A.

    2016-02-01

    The continental shelf region off the Washington-Oregon-California coast is seasonally exposed to water with a low aragonite saturation state by coastal upwelling of CO2-rich waters. To date, the spatial and temporal distribution of anthropogenic CO2 (Canthro) contribution to the CO2-rich waters is largely unknown. Here we use an adaptation of the linear regression approach described in Feely et al (2008) along with the GO-SHIP Repeat Hydrography data sets from the northeast Pacific to establish an annually updated relationship between Canthro and potential density. This relationship was then used with the NOAA Ocean Acidification Program west coast cruise data sets from 2007, 2011, 2012 and 2013 to determine the spatial variations of Canthro in the upwelled water. Our results show large spatial differences in Canthro in surface waters along the coast with the lowest surface values (40-45 µmol kg-1) in strong upwelling regions of off northern California and southern Oregon and higher values (50-70 µmol kg-1) to the north and south. Canthro contributes an average of about 70% of the increased amount of dissolved inorganic carbon in the upwelled waters at the surface. In contrast, at 50 m the Canthro contribution is approximately 31% and at 100 m it averages about 16%. The remaining contributions are primarily due to respiration processes in the water that was upwelled and transported to coastal regions or underwent respiration processes that occurred locally during the course of the upwelling season. The uptake of Canthro has caused the aragonite saturation horizon to shoal by approximately 30-50 m since preindustrial period so that the undersaturated waters are well within the regions that affect the biological communities on the continental shelf.

  19. Radiative transfer modeling of upwelling light field in coastal waters

    International Nuclear Information System (INIS)

    Sundarabalan, Balasubramanian; Shanmugam, Palanisamy; Manjusha, Sadasivan

    2013-01-01

    Numerical simulations of the radiance distribution in coastal waters are a complex problem, but playing a growingly important role in optical oceanography and remote sensing applications. The present study attempts to modify the Inherent Optical Properties (IOPs) to allow the phase function to vary with depth, and the bottom boundary to take into account a sloping/irregular surface and the effective reflectance of the bottom material. It then uses the Hydrolight numerical model to compute Apparent Optical Properties (AOPs) for modified IOPs and bottom boundary conditions compared to the default values available in the standard Hydrolight model. The comparison of the profiles of upwelling radiance simulated with depth-dependent IOPs as well as modified bottom boundary conditions for realistic cases of coastal waters off Point Calimere of southern India shows a good match between the simulated and measured upwelling radiance profile data, whereas there is a significant drift between the upwelling radiances simulated from the standard Hydrolight model (with default values) and measured data. Further comparison for different solar zenith conditions at a coastal station indicates that the upwelling radiances simulated with the depth-dependent IOPs and modified bottom boundary conditions are in good agreement with the measured radiance profile data. This simulation captures significant changes in the upwelling radiance field influenced by the bottom boundary layer as well. These results clearly emphasize the importance of using realistic depth-dependent IOPs as well as bottom boundary conditions as input to Hydrolight in order to obtain more accurate AOPs in coastal waters. -- Highlights: ► RT model with depth-dependent IOPs and modified bottom boundary conditions provides accurate L u profiles in coastal waters. ► The modified phase function model will be useful for coastal waters. ► An inter-comparison with measured upwelling radiance gives merits of the

  20. Quantum Codes From Cyclic Codes Over The Ring R 2

    International Nuclear Information System (INIS)

    Altinel, Alev; Güzeltepe, Murat

    2016-01-01

    Let R 2 denotes the ring F 2 + μF 2 + υ 2 + μυ F 2 + wF 2 + μwF 2 + υwF 2 + μυwF 2 . In this study, we construct quantum codes from cyclic codes over the ring R 2 , for arbitrary length n, with the restrictions μ 2 = 0, υ 2 = 0, w 2 = 0, μυ = υμ, μw = wμ, υw = wυ and μ (υw) = (μυ) w. Also, we give a necessary and sufficient condition for cyclic codes over R 2 that contains its dual. As a final point, we obtain the parameters of quantum error-correcting codes from cyclic codes over R 2 and we give an example of quantum error-correcting codes form cyclic codes over R 2 . (paper)

  1. Discriminating the biophysical impacts of coastal upwelling and mud banks along the southwest coast of India

    Science.gov (United States)

    Karnan, C.; Jyothibabu, R.; Arunpandi, N.; Jagadeesan, L.; Muraleedharan, K. R.; Pratihari, A. K.; Balachandran, K. K.; Naqvi, S. W. A.

    2017-08-01

    surface and av. 1.3 ± 0.2 mgC L- 1 at subsurface). The seasonal mean bio-volume of micro-autotrophs followed the same pattern in all three locations with the dominance of smaller individuals during the Pre-Southwest Monsoon (av. 55 ± 4.4 × 103 μm3 individual- 1 at surface and av. 67.1 ± 38.4 × 103 μm3 individual- 1 at subsurface). Relatively large phytoplankton dominated during the Southwest Monsoon (av. 77.3 ± 5.5 × 103 μm3 individual- 1 at surface and av. 90.3 ± 4.9 × 103 μm3 individual- 1 at subsurface). Similar spatial change in the plankton composition, biomass and size structure in all three locations suggested the dominant role of coastal upwelling, and not the mud bank, in shaping the dominant autotrophic plankton in the study domain. The nutrient enrichment in the region associated with the coastal upwelling facilitated the predominance of a classical short food chain capable of supporting large fish stocks. In addition to relatively calm mud bank, the hypoxic, cool upwelled waters that existed in the subsurface induce the fish stock to concentrate in the surface waters, making the relatively calm mud bank and adjoining areas a rich fishing ground for the native fishers.

  2. Upwelling regions, the most fertile of the seas' habitats, are also ...

    African Journals Online (AJOL)

    spamer

    apply to dinoflagellate bloom events in coastal upwelling systems. * Graduate School of ..... exclusive of coccolithophorids (Smayda 1997b). Group. Daily growth rates ..... route taken partly dependent on the duration of the upwelling relaxation ...

  3. Influence of monsoon upwelling on the planktonic foraminifera off Oman during Late Quaternary

    Digital Repository Service at National Institute of Oceanography (India)

    Naidu, P.D.

    Planktonic foraminifer abundances, fluxes, test sizes, and coiling properties are influenced in various ways by the southwest monsoon winds and associated upwelling in the western Arabian Sea. The influence of monsoon driven upwelling...

  4. Some remarks on the space R2(E

    Directory of Open Access Journals (Sweden)

    Claes Fernström

    1983-01-01

    Full Text Available Let E be a compact subset of the complex plane. We denote by R(E the algebra consisting of the rational functions with poles off E. The closure of R(E in Lp(E, 1≤p1, as a necessary and sufficient condition for R2(E≠L2(E. We also construct a compact set E such that R2(E has an isolated bounded point evaluation. In section 3 we examine the smoothness properties of functions in R2(E at those points which admit bounded point evaluations.

  5. Upwelling Index, 30N 119W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  6. Upwelling Index, 42N 125W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  7. Upwelling Index, 54N 134W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  8. Upwelling Index, 60N 149W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  9. Upwelling Index, 39N 125W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  10. Upwelling Index, 36N 122W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  11. Upwelling Index, 24N 113W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  12. Upwelling Index, 21N 107W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  13. Upwelling Index, 48N 125W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  14. Upwelling Index, 45N 125W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  15. Upwelling Index, 27N 116W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  16. Upwelling Index, 57N 137W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  17. Upwelling Index, 60N 146W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  18. Upwelling Index, 33N 119W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  19. Upwelling Index, 51N 131W, 6-hourly

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Upwelling index computed from 1-degree FNMOC sea level pressure for 15 locations off the North American West Coast at each 3 degrees of latitude from 21N to 60N. The...

  20. Although most of the phytoplankton of the Benguela upwelling ...

    African Journals Online (AJOL)

    spamer

    The Benguela upwelling system is subjected to blooms of harmful and toxic algae, the incidence and consequences of which are ... the coupling between this physical environment and ... Gordons Bay) and the 24 stations at which Fisheries Control Officers are located ... Oil Pollution vessels and aircraft, the Air Force.

  1. Nitrate reducing activity pervades surface waters during upwelling.

    Digital Repository Service at National Institute of Oceanography (India)

    Fernandes, S.O.; Halarnekar, R.; Malik, A.; Vijayan, V.; Varik, S.; RituKumari; Jineesh V.K.; Gauns, M.U.; Nair, S.; LokaBharathi, P.A.

    .A., Roson, G., Perez, F.F., Figueiras, F.G., Pazos, Y., 1996. Nitrogen cycling in an estuarine upwelling system, the Ria de Arousa (NW Spain). Short-time-scale patterns of hydrodynamic and biogeochemical circulation. Mar. Ecol. Prog. Ser. 135, 259...

  2. Nutrients, Recycling, and Biological Populations in Upwelling Ecosystems

    Energy Technology Data Exchange (ETDEWEB)

    Whitledge, T. E.

    1980-01-01

    Nutrient recycling has been studied in the upwelling areas of Baja California, Northwest Africa, and Peru. Regeneration by biological populations in these areas contributes significant quantities of recycled nitrogen which is utilized in productivity processes. Each area has a different combination of organisms which leads to differences in the relative contributions of zooplankton, nekton, or benthos to the nutrient cycles. Comparisons of ammonium regeneration rates of zooplankton and nekton-micronekton populations in the three upwelling areas show that zooplankton recycle relatively less nitrogen in the Baja California and Peru systems than nekton. In the Northwest Africa upwelling region, however, zooplankton, fish, and benthic inputs are all substantial. In recent years the Peruvian upwelling system has been altered with the decline of the anchoveta population and an increase in the importance of zooplankton in nutrient recycling. The distribution of recycled nitrogen (ammonium and urea) in transects across the shelf at 10°S and 15°S indicates that regeneration is relatively more important at 10°S in the region of the wide shelf. In both areas the distribution of ammonium and urea are not entirely coincident thereby indicating differences in their production and/or utilization.

  3. Microsoft System Center 2012 R2 Operations Manager cookbook

    CERN Document Server

    Beaumont (MVP), Steve; Odika, Chiyo; Ryan, Robert

    2015-01-01

    If you are tasked with monitoring the IT infrastructure within your organization, this book demonstrates how System Center 2012 R2 Operations Manager offers a radical and exciting solution to modern administration.

  4. Spectral sum rule for time delay in R2

    International Nuclear Information System (INIS)

    Osborn, T.A.; Sinha, K.B.; Bolle, D.; Danneels, C.

    1985-01-01

    A local spectral sum rule for nonrelativistic scattering in two dimensions is derived for the potential class velement ofL 4 /sup // 3 (R 2 ). The sum rule relates the integral over all scattering energies of the trace of the time-delay operator for a finite region Σis contained inR 2 to the contributions in Σ of the pure point and singularly continuous spectra

  5. On an upwelling front, propagation of upwelling and vertical velocity in the eastern Arabian sea during monsoon, 1987

    Digital Repository Service at National Institute of Oceanography (India)

    Antony, M.K.; Unnikrishnan, A.S.

    A coastal upwelling front parallel to the coast and identifiable upto a depth of 75 m was observed between 12.5 and 16 degrees N along the eastern Arabian Sea in September, 1987 from closely spaced digital BT data. With a north-south slope...

  6. Shift in the species composition of the diatom community in the eutrophic Mauritanian coastal upwelling: Results from a multi-year sediment trap experiment (2003-2010)

    Science.gov (United States)

    Romero, Oscar E.; Fischer, Gerhard

    2017-12-01

    A multiannual, continuous sediment trap experiment was conducted at the mooring site CBeu (Cape Blanc eutrophic, ca. 20 °N, ca. 18 °W; trap depth = 1256-1296 m) in the high-productive Mauritanian coastal upwelling. Here we present fluxes and the species-specific composition of the diatom assemblage, and fluxes of biogenic silica (BSi, opal) and total organic carbon (TOC) for the time interval June 2003-Feb 2010. Flux ranges of studied parameters are (i) total diatoms = 1.2 ∗ 108-4.7 ∗ 104 valves m-2 d-1 (average = 5.9 × 106 valves ± 1.4 × 107); (ii) BSi = 296-0.5 mg m-2 d-1 (average = 41.1 ± 53.5 mg m-2 d-1), and (iii) TOC = 97-1 mg m-2 d-1 (average = 20.5 ± 17.8 mg m-2 d-1). Throughout the experiment, the overall good match of total diatom, BSi and TOC fluxes is reasonably consistent and reflects well the temporal occurrence of the main Mauritanian upwelling season. Spring and summer are the most favorable seasons for diatom production and sedimentation: out of the recorded 14 diatom maxima of different magnitude, six occurred in spring and four in summer. The diverse diatom community at site CBeu is composed of four main assemblages: benthic, coastal upwelling, coastal planktonic and open-ocean diatoms, reflecting different productivity conditions and water masses. A striking feature of the temporal variability of the diatom populations is the persistent pattern of seasonal groups' contribution: benthic and coastal upwelling taxa dominated during the main upwelling season in spring, while open-ocean diatoms were more abundant in fall and winter, when the upper water column becomes stratified, upwelling relaxes and productivity decreases. The relative abundance of benthic diatoms strongly increased after 2006, yet their spring-summer contribution remained high until the end of the trap experiment. The occurrence of large populations of benthic diatoms at the hemipelagic CBeu site is interpreted to indicate transport from shallow waters via nepheloid

  7. Dinoflagellate blooms in upwelling systems: Seeding, variability, and contrasts with diatom bloom behaviour

    Science.gov (United States)

    Smayda, T. J.; Trainer, V. L.

    2010-04-01

    The influence of diatom bloom behaviour, dinoflagellate life cycles, propagule type and upwelling bloom cycles on the seeding of dinoflagellate blooms in eastern boundary current upwelling systems is evaluated. Winter-spring diatom bloom behaviour is contrasted with upwelling bloom behaviour because their phenology impacts dinoflagellate blooms. The winter-spring diatom bloom is usually sustained, whereas the classical upwelling diatom bloom occurs as a series of separate, recurrent mini-blooms intercalated by upwelling-relaxation periods, during which dinoflagellates often bloom. Four sequential wind-regulated phases characterize upwelling cycles, with each phase having different effects on diatom and dinoflagellate bloom behaviour: bloom “spin up”, bloom maximum, bloom “spin down”, and upwelling relaxation. The spin up - bloom maximum is the period of heightened diatom growth; the spin down - upwelling-relaxation phases are the periods when dinoflagellates often bloom. The duration, intensity and ratio of the upwelling and relaxation periods making up upwelling cycles determine the potential for dinoflagellate blooms to develop within a given upwelling cycle and prior to the subsequent “spin up” of upwelling that favours diatom blooms. Upwelling diatoms and meroplanktonic dinoflagellates have three types of propagules available to seed blooms: vegetative cells, resting cells and resting cysts. However, most upwelling dinoflagellates are holoplanktonic, which indicates that the capacity to form resting cysts is not an absolute requirement for growth and survival in upwelling systems. The long-term (decadal) gaps in bloom behaviour of Gymnodinium catenatum and Lingulodinium polyedrum, and the unpredictable bloom behaviour of dinoflagellates generally, are examined from the perspective of seeding strategies. Mismatches between observed and expected in situ bloom behaviour and resting cyst dynamics are common among upwelling dinoflagellates. This

  8. a Numerical Study of Basic Coastal Upwelling Processes.

    Science.gov (United States)

    Li, Zhihong

    Available from UMI in association with The British Library. Two-dimensional (2-D) and three-dimensional (3 -D) numerical models with a second order turbulence closure are developed for the study of coastal upwelling processes. A logarithmic coordinate system is introduced to obtain increased resolution in the regions near the surface and bottom where high velocity shear occurs and in the upwelling zone where its width is confined to the coast. In the experiments performed in the 2-D model an ocean initially at rest is driven by a spatially uniform alongshore wind-stress. There is a development of an offshore flow in the surface layer and an onshore flow below the surface layer. In the wind-stress direction there is a development of a coastal surface jet. The neglect of the alongshore pressure gradient leads to the intensification of the jet, and the concentration of the onshore flow in an over-developed Ekman layer yielding an unrealistic deepening of a bottom mixed layer. When bathymetric variations are introduced, some modifications in the dynamics of upwelling are observed. On the shelf region there is another upwelling zone and isotherms are interested with the bottom topography. When an alongshore pressure gradient is added externally into the model, the strength of the coastal jet decreases and a coastal undercurrent exists at greater depth. In addition the return onshore flow is largely independent of depth and the deepening of the bottom mixed layer disappears. In the experiments performed in the 3-D model a wind-stress with limited domain is used. Coastally trapped waves are generated and propagate along the coastline leading to a development of an alongshore pressure gradient, which has a significant effect on upwelling. The evolution of the alongshore flow, vertical velocity and the temperature is determined by both remote and local wind due to the propagation of waves. As the integration proceeds, the flow pattern becomes remarkably 3-dimensional

  9. Implications of Upwells as Hydrodynamic Jets in a Pulse Jet Mixed System

    Energy Technology Data Exchange (ETDEWEB)

    Pease, Leonard F. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Bamberger, Judith A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Minette, Michael J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2017-02-28

    This report evaluates the physics of the upwell flow in pulse jet mixed systems in the Hanford Tank Waste Treatment and Immobilization Plant (WTP). Although the initial downward flow and radial flow from jets characteristic of pulse jet mixers (PJMs) has been analyzed, the upwells have received considerably less attention despite having significant implications for vessel mixing. Do the upwells behave like jets? How do the upwells scale? When will the central upwell break through? What proportion of the vessel is blended by the upwells themselves? Indeed, how the physics of the central upwell is affected by multiple PJMs (e.g., six in the proposed mixing vessels), non-Newtonian rheology, and significant multicomponent solids loadings remain unexplored.

  10. Upwellings mitigated Plio-Pleistocene heat stress for reef corals on the Florida platform (USA)

    Science.gov (United States)

    Brachert, Thomas C.; Reuter, Markus; Krüger, Stefan; Kirkerowicz, Julia; Klaus, James S.

    2016-03-01

    The fast growing calcareous skeletons of zooxanthellate reef corals (z corals) represent unique environmental proxy archives through their oxygen and carbon stable isotope composition (δ18O, δ13C). In addition, the accretion of the skeleton itself is ultimately linked to the environment and responds with variable growth rates (extension rate) and density to environmental changes. Here we present classical proxy data (δ18O, δ13C) in combination with calcification records from 15 massive z corals. The z corals were sampled from four interglacial units of the Florida carbonate platform (USA) dated approximately 3.2, 2.9, 1.8 and 1.2 Ma (middle Pliocene to early Pleistocene). The z corals (Solenastrea, Orbicella, Porites) derive from unlithified shallow marine carbonates and were carefully screened for primary preservation suited for proxy analysis. We show that skeletal accretion responded with decreasing overall calcification rates (decreasing extension rate but increasing density) to warmer water temperatures. Under high annual water temperatures, inferred from sub-annually resolved δ18O data, skeletal bulk density was high, but extension rates and overall calcification rates were at a minimum (endmember scenario 1). Maximum skeletal density was reached during the summer season giving rise to a growth band of high density within the annually banded skeletons ("high density band", HDB). With low mean annual water temperatures (endmember scenario 2), bulk skeletal density was low but extension rates and calcification rates reached a maximum, and under these conditions the HDB formed during winter. Although surface water temperatures in the Western Atlantic warm pool during the interglacials of the late Neogene were ˜ 2 °C higher than they are in the present day, intermittent upwelling of cool, nutrient-rich water mitigated water temperatures off south-western Florida and created temporary refuges for z coral growth. Based on the sub-annually resolved δ18O and

  11. Seasonal variation of the South Indian tropical gyre

    NARCIS (Netherlands)

    Aguiar-González, B.; Ponsoni, Leandro; Ridderinkhof, H.; van Aken, H.M.; de Ruijter, W.P.M.; Maas, L.R.M.

    2016-01-01

    Based on satellite altimeter data and global atlases of temperature, salinity, wind stress and wind-driven circulation we investigate the seasonal variation of the South Indian tropical gyre and its associated open-ocean upwelling system, known as the Seychelles–Chagos Thermocline Ridge (SCTR).

  12. Seasonal oxygen deficiency over the western continental shelf of India

    Digital Repository Service at National Institute of Oceanography (India)

    Naqvi, S.W.A.; Naik, H.; Jayakumar, D.A.; Shailaja, M.S.; Narvekar, P.V.

    , and their impact on biology and chemistry off the west coast of India are described here. The O2 deficiency in this region, associated with the seasonal (southwest monsoon) upwelling, seems to have intensified in recent years, presumably in response to enhanced...

  13. Nutrient pumping by submesoscale circulations in the mauritanian upwelling system

    Science.gov (United States)

    Hosegood, P. J.; Nightingale, P. D.; Rees, A. P.; Widdicombe, C. E.; Woodward, E. M. S.; Clark, D. R.; Torres, R. J.

    2017-12-01

    Observations made within a cold filament in the Mauritanian upwelling system demonstrate that intense submesoscale circulations at the peripheral edges of the filament are likely responsible for anomalously high levels of observed primary productivity by resupplying nutrients to the euphotic zone. Measurements made on the shelf within the recently upwelled water reveal that primary production (PP) of 8.2 gC/m-2 day-1 was supported by nitrate concentrations (NC) of 8 mmol m-3. Towards the front that defined the edge of the filament containing the upwelled water as it was transported offshore, PP dropped to 1.6 gC m-2 day-1 whilst NC dropped to 5.5 mmol m-3. Thus, whilst the observed nutrients on the shelf accounted for 90% of new production, this value dropped to ∼60% near the filament's front after accounting for vertical turbulent fluxes and Ekman pumping. We demonstrate that the N15 was likely to have been supplied at the front by submesoscale circulations that were directly measured as intense vertical velocities ⩾100 m day-1 by a drifting acoustic Doppler current profiler that crossed a submesoscale surface temperature front. At the same time, a recently released tracer was subducted out of the mixed layer within 24 h of release, providing direct evidence that the frontal circulations were capable of accessing the reservoir of nutrients beneath the pycnocline. The susceptibility of the filament edge to submesoscale instabilities was demonstrated by O(1) Rossby numbers at horizontal scales of 1-10 km. The frontal circulations are consistent with instabilities arising from a wind-driven nonlinear Ekman buoyancy flux generated by the persistent northerly wind stress that has a down-front component at the northern edge of the inshore section of the filament. The prevalence of submesoscale instabilities and their associated vertical circulations are proposed to be a key mechanism operating at sub-grid scales and sustaining new production throughout the upwelling

  14. Meteorological constraints on oceanic halocarbons above the Peruvian Upwelling

    OpenAIRE

    S. Fuhlbrügge; B. Quack; E. Atlas; A. Fiehn; H. Hepach; K. Krüger

    2015-01-01

    Halogenated very short lived substances (VSLS) are naturally produced in the ocean and emitted to the atmosphere. Recently, oceanic upwelling regions in the tropical East Atlantic were identified as strong sources of brominated halocarbons to the atmosphere. During a cruise of R/V METEOR in December 2012 the oceanic sources and emissions of various halogenated trace gases and their mixing ratios in the marine atmospheric boundary layer (M...

  15. Meteorological constraints on oceanic halocarbons above the Peruvian upwelling

    OpenAIRE

    Fuhlbrügge, Steffen; Quack, Birgit; Atlas, Elliot; Fiehn, Alina; Hepach, Helmke; Krüger, Kirstin

    2016-01-01

    During a cruise of R/V METEOR in December 2012 the oceanic sources and emissions of various halogenated trace gases and their mixing ratios in the marine atmospheric boundary layer (MABL) were investigated above the Peruvian upwelling. This study presents novel observations of the three very short lived substances (VSLSs) – bromoform, dibromomethane and methyl iodide – together with high-resolution meteorological measurements, Lagrangian transport and source–loss calculations. ...

  16. Meteorological constraints on oceanic halocarbons above the Peruvian upwelling

    Directory of Open Access Journals (Sweden)

    S. Fuhlbrügge

    2016-09-01

    Full Text Available During a cruise of R/V METEOR in December 2012 the oceanic sources and emissions of various halogenated trace gases and their mixing ratios in the marine atmospheric boundary layer (MABL were investigated above the Peruvian upwelling. This study presents novel observations of the three very short lived substances (VSLSs – bromoform, dibromomethane and methyl iodide – together with high-resolution meteorological measurements, Lagrangian transport and source–loss calculations. Oceanic emissions of bromoform and dibromomethane were relatively low compared to other upwelling regions, while those for methyl iodide were very high. Radiosonde launches during the cruise revealed a low, stable MABL and a distinct trade inversion above acting as strong barriers for convection and vertical transport of trace gases in this region. Observed atmospheric VSLS abundances, sea surface temperature, relative humidity and MABL height correlated well during the cruise. We used a simple source–loss estimate to quantify the contribution of oceanic emissions along the cruise track to the observed atmospheric concentrations. This analysis showed that averaged, instantaneous emissions could not support the observed atmospheric mixing ratios of VSLSs and that the marine background abundances below the trade inversion were significantly influenced by advection of regional sources. Adding to this background, the observed maximum emissions of halocarbons in the coastal upwelling could explain the high atmospheric VSLS concentrations in combination with their accumulation under the distinct MABL and trade inversions. Stronger emissions along the nearshore coastline likely added to the elevated abundances under the steady atmospheric conditions. This study underscores the importance of oceanic upwelling and trade wind systems on the atmospheric distribution of marine VSLS emissions.

  17. Meteorological constraints on oceanic halocarbons above the Peruvian upwelling

    Science.gov (United States)

    Fuhlbrügge, Steffen; Quack, Birgit; Atlas, Elliot; Fiehn, Alina; Hepach, Helmke; Krüger, Kirstin

    2016-09-01

    During a cruise of R/V METEOR in December 2012 the oceanic sources and emissions of various halogenated trace gases and their mixing ratios in the marine atmospheric boundary layer (MABL) were investigated above the Peruvian upwelling. This study presents novel observations of the three very short lived substances (VSLSs) - bromoform, dibromomethane and methyl iodide - together with high-resolution meteorological measurements, Lagrangian transport and source-loss calculations. Oceanic emissions of bromoform and dibromomethane were relatively low compared to other upwelling regions, while those for methyl iodide were very high. Radiosonde launches during the cruise revealed a low, stable MABL and a distinct trade inversion above acting as strong barriers for convection and vertical transport of trace gases in this region. Observed atmospheric VSLS abundances, sea surface temperature, relative humidity and MABL height correlated well during the cruise. We used a simple source-loss estimate to quantify the contribution of oceanic emissions along the cruise track to the observed atmospheric concentrations. This analysis showed that averaged, instantaneous emissions could not support the observed atmospheric mixing ratios of VSLSs and that the marine background abundances below the trade inversion were significantly influenced by advection of regional sources. Adding to this background, the observed maximum emissions of halocarbons in the coastal upwelling could explain the high atmospheric VSLS concentrations in combination with their accumulation under the distinct MABL and trade inversions. Stronger emissions along the nearshore coastline likely added to the elevated abundances under the steady atmospheric conditions. This study underscores the importance of oceanic upwelling and trade wind systems on the atmospheric distribution of marine VSLS emissions.

  18. Isotopic evidences of past upwelling intensity in the Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Naidu, P.D.

    and understand the history of upwelling as it is recorded in deep-sea sediments. The southwest (SW) monsoon strongly influences the climatic conditions in South and Southeast Asia and biological productivity in the Arabian Sea. ability at the ODP Site 728... climatic change and ocean history (McCrea, 1950; Epstein et al., 1953; Emiliani, 1955). The isotopic role of planktic forami- nifera expanded, it was recognized that foraminifera did not secret their shells in isotopic equilibrium with ambient water (Be...

  19. Oracle JDeveloper 11gR2 Cookbook

    CERN Document Server

    Haralabidis, Nick

    2012-01-01

    "Oracle JDeveloper 11gR2 Cookbook" is a practical cookbook which goes beyond the basics with immediately applicable recipes for building ADF applications at an intermediate-to-advanced level. If you are a JavaEE developer who wants to go beyond the basics of building ADF applications with Oracle JDeveloper 11gR2 and get hands on with practical recipes, this book is for you. You should be comfortable with general Java development principles, the JDeveloper IDE, and ADF basics

  20. Large Topographic Rises on Venus: Implications for Mantle Upwelling

    Science.gov (United States)

    Stofan, Ellen R.; Smrekar, Suzanne E.; Bindschandler, Duane L.; Senske, David A.

    1995-01-01

    Topographic rises on Venus have been identified that are interpreted to be the surface manifestation of mantle upwellings. These features are classified into groups based on their dominant morphology. Atla and Beta Regiones are classified as rift-dominated, Dione, western Eistla, Bell, and Imdr Regiones as volcano-dominated, and Themis, eastern Eistla, and central Eistla Regiones as corona-dominated. At several topographic rises, geologic indicators were identified that may provide evidence of uplifted topography (e.g., volcanic flow features trending upslope). We assessed the minimum contribution of volcanic construction to the topography of each rise, which in general represents less than 5% of the volume of the rise, similar to the volumes of edifices at terrestrial hotspot swells. The total melt volume at each rise is approximated to be 10(exp 4) - 10(exp 6) cu km. The variations in morphology, topography, and gravity signatures at topographic rises are not interpreted to indicate variations in stage of evolution of a mantle upwelling. Instead, the morphologic variations between the three classes of topographic rises are interpreted to indicate the varying influences of lithospheric structure, plume characteristics, and regional tectonic environment. Within each class, variations in topography, gravity, and amount of volcanism may be indicative of differing stages of evolution. The similarity between swell and volcanic volumes for terrestrial and Venusian hotspots implies comparable time-integrated plume strengths for individual upwellings on the two planets.

  1. Oceanic upwelling and productivity in the eastern tropical Pacific

    International Nuclear Information System (INIS)

    Fiedler, P.C.; Philbrick, V.; Chavez, F.P.

    1991-01-01

    An oceanographic survey of the eastern tropical Pacific Ocean in August-November 1990 found a productive, nutrient-rich, moderately high-chlorophyll surface layer in two oceanic upwelling regions: the equatorial divergence, especially east of the Galapagos, and the countercurrent divergence out to 105 degree W, > 1,000 km west of the Costa Rica Dome. Although NO 3 is not depleted in upwelling regions, relationships among nutrient concentrations and temperature in 1986-1988 data from the same area show that NO 3 is the first macronutrient to be depleted in adjacent, less-productive regions. A three-dimensional, two-layer box model of NO 3 flux within and into the euphotic zone gives estimated rates of new production that are ∼29% of measured rates of 14 C phytoplankton production. Persistence of excess NO 3 in the euphotic zone exceeds 1 yr under high-nutrient, low-chlorophyll conditions off the equator where weak upwelling, or downwelling, occurs. These results indicate substantial control or limitation of NO 3 utilization and productivity in nutrient-rich oceanic regions of the eastern tropical Pacific

  2. Patterns of copepod diversity in the Chilean coastal upwelling system

    Science.gov (United States)

    Hidalgo, Pamela; Escribano, Ruben; Vergara, Odette; Jorquera, Erika; Donoso, Katty; Mendoza, Paula

    2010-12-01

    The copepod community structure from the Northern and Central/southern upwelling regions off Chile was studied and compared. The derived community descriptors were species abundance (N), species richness (R) and the Shannon-Wiener diversity index (H'). These descriptors were related to distinct habitats and conditions, sea surface temperature (SST) and depth of the upper boundary of the oxygen minimum zone (OMZ). From 159 samples, obtained between 2002 and 2008, a total number of 118 species were found of which the calanoids Paracalanus indicus, Acartia tonsa and Eucalanus inermis, along with the cyclopoid Oithona similis, and the poecilostomatoids Triconia conifera and Oncaea media were the dominant species. H' was higher in the northern region, but no differences in N and R were detected between regions. N was higher in the epipelagic vs the deep habitat, but R and H' did not differ. N, R and H' correlated positively to SST and negatively to OMZ depth. The ascent of the OMZ to the upper layer forced by upwelling was proposed as a mechanism that aggregates and increases copepod diversity in the food-rich photic zone. All these findings suggest a fundamental role of upwelling variation for modulating copepod dynamics and community structure in this highly productive but strongly variable marine ecosystem.

  3. Surface mixing and biological activity in the four Eastern Boundary Upwelling Systems

    Directory of Open Access Journals (Sweden)

    V. Rossi

    2009-08-01

    Full Text Available Eastern Boundary Upwelling Systems (EBUS are characterized by a high productivity of plankton associated with large commercial fisheries, thus playing key biological and socio-economical roles. Since they are populated by several physical oceanic structures such as filaments and eddies, which interact with the biological processes, it is a major challenge to study this sub- and mesoscale activity in connection with the chlorophyll distribution. The aim of this work is to make a comparative study of these four upwelling systems focussing on their surface stirring, using the Finite Size Lyapunov Exponents (FSLEs, and their biological activity, based on satellite data. First, the spatial distribution of horizontal mixing is analysed from time averages and from probability density functions of FSLEs, which allow us to divide each areas in two different subsystems. Then we studied the temporal variability of surface stirring focussing on the annual and seasonal cycle. We also proposed a ranking of the four EBUS based on the averaged mixing intensity. When investigating the links with chlorophyll concentration, the previous subsystems reveal distinct biological signatures. There is a global negative correlation between surface horizontal mixing and chlorophyll standing stocks over the four areas. To try to better understand this inverse relationship, we consider the vertical dimension by looking at the Ekman-transport and vertical velocities. We suggest the possibility of a changing response of the phytoplankton to sub/mesoscale turbulence, from a negative effect in the very productive coastal areas to a positive one in the open ocean. This study provides new insights for the understanding of the variable biological productivity in the ocean, which results from both dynamics of the marine ecosystem and of the 3-D turbulent medium.

  4. GluR2 ligand-binding core complexes

    DEFF Research Database (Denmark)

    Kasper, C; Lunn, M-L; Liljefors, T

    2002-01-01

    X-ray structures of the GluR2 ligand-binding core in complex with (S)-Des-Me-AMPA and in the presence and absence of zinc ions have been determined. (S)-Des-Me-AMPA, which is devoid of a substituent in the 5-position of the isoxazolol ring, only has limited interactions with the partly hydrophobic...

  5. Equipment for thermal neutron flux measurements in reactor R2

    Energy Technology Data Exchange (ETDEWEB)

    Johansson, E; Nilsson, T; Claeson, S

    1960-04-15

    For most of the thermal neutron flux measurements in reactor R2 cobalt wires will be used. The loading and removal of these wires from the reactor core will be performed by means of a long aluminium tube and electromagnets. After irradiation the wires will be scanned in a semi-automatic device.

  6. Microsoft System Center Data Protection Manager 2012 R2 cookbook

    CERN Document Server

    Hedblom, Robert

    2015-01-01

    If you are a DPM administrator, this book will help you verify your knowledge and provide you with everything you need to know about the 2012 R2 release. No prior knowledge about System Center DPM is required, however some experience of running backups will come in handy.

  7. R2E – identifying problems, mitigating risks

    CERN Document Server

    Anaïs Schaeffer

    2013-01-01

    During LS1, the R2E project team will be working on a task as painstaking as it is crucial: to achieve a sixfold reduction in the number of electronic malfunctions caused by radiation. On their success depends the ability of the accelerator to function correctly at nominal energy. No mean challenge, considering it comes on top of the tenfold reduction already achieved since 2009.   The graph plots the rate of LHC beam dumps due to single-event effects against beam luminosity. An indication of the challenge that faces the R2E project teams during LS1! The origins of the project known as R2E (Radiation to Electronics) go back to 2007, when the CNGS (CERN Neutrinos to Gran Sasso) experiment was being commissioned. "Right from the outset, some CNGS control systems were causing problems. They would regularly break down in operations with beam," recalls Markus Brugger, head of the R2E project. "Even though the beam intensity was very low, we began to suspect that radiati...

  8. Modelling an alkenone-like proxy record in the NW African upwelling

    Directory of Open Access Journals (Sweden)

    X. Giraud

    2006-01-01

    Full Text Available A regional biogeochemical model is applied to the NW African coastal upwelling between 19° N and 27° N to investigate how a water temperature proxy, alkenones, are produced at the sea surface and recorded in the slope sediments. The biogeochemical model has two phytoplankton groups: an alkenone producer group, considered to be coccolithophores, and a group comprising other phytoplankton. The Regional Ocean Modelling System (ROMS is used to simulate the ocean circulation and takes advantage of the Adaptive Grid Refinement in Fortran (AGRIF package to set up an embedded griding system. In the simulations the alkenone temperature records in the sediments are between 1.1 and 2.3°C colder than the annual mean SSTs. Despite the seasonality of the coccolithophore production, this temperature difference is not mainly due to a seasonal bias, nor to the lateral advection of phytoplankton and phytodetritus seaward from the cold near-shore waters, but to the production depth of the coccolithophores. If coretop alkenone temperatures are effectively recording the annual mean SSTs, the amount of alkenone produced must vary among the coccolithophores in the water column and depend on physiological factors (e.g. growth rate, nutrient stress.

  9. R 2 inflation to probe non-perturbative quantum gravity

    Science.gov (United States)

    Koshelev, Alexey S.; Sravan Kumar, K.; Starobinsky, Alexei A.

    2018-03-01

    It is natural to expect a consistent inflationary model of the very early Universe to be an effective theory of quantum gravity, at least at energies much less than the Planck one. For the moment, R + R 2, or shortly R 2, inflation is the most successful in accounting for the latest CMB data from the PLANCK satellite and other experiments. Moreover, recently it was shown to be ultra-violet (UV) complete via an embedding into an analytic infinite derivative (AID) non-local gravity. In this paper, we derive a most general theory of gravity that contributes to perturbed linear equations of motion around maximally symmetric space-times. We show that such a theory is quadratic in the Ricci scalar and the Weyl tensor with AID operators along with the Einstein-Hilbert term and possibly a cosmological constant. We explicitly demonstrate that introduction of the Ricci tensor squared term is redundant. Working in this quadratic AID gravity framework without a cosmological term we prove that for a specified class of space homogeneous space-times, a space of solutions to the equations of motion is identical to the space of backgrounds in a local R 2 model. We further compute the full second order perturbed action around any background belonging to that class. We proceed by extracting the key inflationary parameters of our model such as a spectral index ( n s ), a tensor-to-scalar ratio ( r) and a tensor tilt ( n t ). It appears that n s remains the same as in the local R 2 inflation in the leading slow-roll approximation, while r and n t get modified due to modification of the tensor power spectrum. This class of models allows for any value of r complete R 2 gravity a natural target for future CMB probes.

  10. Impact of upwelling events on the sea water carbonate chemistry and dissolved oxygen concentration in the Gulf of Papagayo (Culebra Bay, Costa Rica: Implications for coral reefs

    Directory of Open Access Journals (Sweden)

    Tim Rixen

    2012-04-01

    Full Text Available The Gulf of Papagayo, Pacific coast of Costa Rica, is one of the three seasonal upwelling areas of Mesoamerica. In April 2009, a 29-hour experiment was carried out at the pier of the Marina Papagayo, Culebra Bay. We determined sea surface temperature (SST, dissolved oxygen concentration, salinity, pH, and the partial pressure of CO2 (pCO2. The aragonite saturation state (Ωa as well as the other parameters of the marine carbonate system such as the total dissolved inorganic carbon (DIC and the total alkalinity (TA were calculated based on the measured pH and the pCO2. The entrainment of subsurface waters raised the pCO2 up to 645 µatm. SSTs, dissolved oxygen concentrations decreased form 26.4 to 23.7°C and from 228 to 144 µmol l-1. Ωa dropped down to values of 2.1. Although these changes are assumed to reduce the coral growth, the main reef building coral species within the region (Pocillopora spp. and Pavona clavus reveal growth rates exceeding those measured at other sites in the eastern tropical Pacific. This implies that the negative impact of upwelling on coral growth might be overcompensated by an enhanced energy supply caused by the high density of food and nutrients and more favorable condition for coral growth during the non-upwelling season.

  11. Shadow corrosion evaluation in the Studsvik R2 reactor

    International Nuclear Information System (INIS)

    Sanders, Ch.; Lysell, G.

    2000-01-01

    Post-irradiation examination has shown that increased corrosion occurs when zirconium alloys are in contact with or in proximity to other metallic objects. The observations indicate an influence of irradiation from the adjacent component as the enhanced corrosion occurs as a 'shadow' of the metallic object on the zirconium surface. This phenomenon could ultimately limit the lifetime of certain zirconium alloy components in the reactor. The Studsvik R2 materials test reactor has an In-Core Autoclave (INCA) test facility especially designed for water chemistry and materials research. The INCA facility has been evaluated and found suitable for shadow corrosion studies. The R2 reactor core containing the INCA facility was modeled with the Monte Carlo N-Particle (MCNP) code in order to evaluate the electron deposition in various materials and to develop a hypothesis of the shadow corrosion mechanism. (authors)

  12. System Center 2012 R2 Virtual Machine Manager cookbook

    CERN Document Server

    Cardoso, Edvaldo Alessandro

    2014-01-01

    This book is a step-by-step guide packed with recipes that cover architecture design and planning. The book is also full of deployment tips, techniques, and solutions. If you are a solutions architect, technical consultant, administrator, or any other virtualization enthusiast who needs to use Microsoft System Center Virtual Machine Manager in a real-world environment, then this is the book for you. We assume that you have previous experience with Windows 2012 R2 and Hyper-V.

  13. A supersymmetric R2-action in six dimensions and torsion

    International Nuclear Information System (INIS)

    Bergshoeff, E.; Salam, A.; Sezgin, E.

    1986-01-01

    We give the superconformal extension of (Rsub(μνab)) 2 in six dimensions. We show that in a superconformal gauge the 3-form field Hsub(μνrho) has a natural torsion interpretation. We also give partial results on the superconformal extension of the Gauss-Bonnet combination: Rsub(μνab) 2 -4Rsub(μa) 2 +R 2 . (author)

  14. C2R2: Training Students To Build Coastal Resilience

    Science.gov (United States)

    Ferraro, C.; Kopp, R. E.; Jordan, R.; Gong, J.; Andrews, C.; Auermuller, L. M.; Herb, J.; McDonnell, J. D.; Bond, S.

    2017-12-01

    In the United States, about 23 million people live within 6 meters of sea level. In many parts of the country, sea-level rise between 1960 and 2010 has already led to a 2-5-fold increase in the rate of `nuisance' flooding. On top of rising seas, intensifying hurricanes and more frequent extremes of heat, humidity and precipitation pose additional risks to coastal societies, economies and ecosystems. Addressing risks posed by changing climate conditions in coastal areas demands innovative strategies that intersect multiple disciplines including engineering, ecology, communication, climate science, and community planning. To be usable, it also requires engaging coastal stakeholders in the development of research questions, the assessment of implications of research for planning and policy, and the communication of research results. Yet traditional, disciplinary programs are poorly configured to train the workforce needed to assess coastal climate risk and to develop and deploy integrated strategies for increasing coastal climate resilience. Coastal Climate Risk & Resilience (C2R2) is an NSF Research Traineeship (NRT) working to prepare the workforce that will build coastal resilience in the face of climate risks. Through its trainee and certificate programs, C2R2 works with graduate students at Rutgers University from multiple disciplines to better integrate all the elements of coastal systems and to communicate effectively with coastal stakeholders. C2R2 students will acquire the knowledge and practical skills needed to become leading researchers and practitioners tackling the critical challenges of coastal resilience.

  15. Lipid biomarker patterns of phosphogenic sediments from upwelling regions

    DEFF Research Database (Denmark)

    Arning, Esther T.; Birgel, Daniel; Schultz-Vogt, Heide N.

    2008-01-01

    Sediments of upwelling regions off Namibia, Peru, and Chile contain dense populations of large nitrate-storing sulfide-oxidizing bacteria, Thiomargarita, Beggiatoa, and Thioploca. Increased contents of monounsaturated C16 and C18 fatty acids have been found at all stations studied, especially when...... these bacteria. As a consequence, the distributions of sulfate reducers in sediments of Namibia, Peru, and Chile are closely related to differences in the motility of the various sulfide oxidizers at the three study sites. Depth profiles of mono-O-alkyl glycerol ethers have been found to correlate best...

  16. Mesozooplankton of the Arabian Sea: Patterns influenced by seasons, upwelling, and oxygen concentrations

    Digital Repository Service at National Institute of Oceanography (India)

    Smith, S.L.; Madhupratap, M.

    of the station narrative (Sewell, 1935). Mesozooplankton tows were done at fixed depths using 3 m 2 ring nets with 330 lm mesh (Table 1), with the technique being towing at a depth for an hour and then pulling the net up quickly to minimize catching organisms...

  17. Towards a management perspective for coastal upwelling ecosystems

    Energy Technology Data Exchange (ETDEWEB)

    Howe, S.O.; Walsh, J.J.

    1976-01-01

    Data are reviewed from studies on the general distribution of upwelling of coastal waters, associated current patterns, and first order biological effects. Field observations and theory are discussed. Recent research has shown that variability and dynamism are the predominant characteristic features of these regions. Populations related by nonlinear interactions occur in constantly moving patches and swirls subjected to variability in the winds, currents, water chemistry, and solar insolation. Gross stationary features of upwelling communities have been described, but the responses of critical components and their relationships to human or natural perturbations remain poorly defined in this and other types of coastal ecosystems. Large scale research programs recognize that the continental shelf ecosystems are complex event-oriented phenomena. It is postulated that assessment of living resources in an environmental vacuum may lead to mismanagement and hindcasting rather than prescient management. A growing data base encourages the development of computer simulation models of ecosystem relationships and responses will lead to better understanding and management of these and other marine ecosystems in the future. 80 references.

  18. Submesoscale CO2 variability across an upwelling front off Peru

    Science.gov (United States)

    Köhn, Eike E.; Thomsen, Sören; Arévalo-Martínez, Damian L.; Kanzow, Torsten

    2017-12-01

    As a major source for atmospheric CO2, the Peruvian upwelling region exhibits strong variability in surface fCO2 on short spatial and temporal scales. Understanding the physical processes driving the strong variability is of fundamental importance for constraining the effect of marine emissions from upwelling regions on the global CO2 budget. In this study, a frontal decay on length scales of 𝒪(10 km) was observed off the Peruvian coast following a pronounced decrease in down-frontal (equatorward) wind speed with a time lag of 9 h. Simultaneously, the sea-to-air flux of CO2 on the inshore (cold) side of the front dropped from up to 80 to 10 mmol m-2 day-1, while the offshore (warm) side of the front was constantly outgassing at a rate of 10-20 mmol m-2 day-1. Based on repeated ship transects the decay of the front was observed to occur in two phases. The first phase was characterized by a development of coherent surface temperature anomalies which gained in amplitude over 6-9 h. The second phase was characterized by a disappearance of the surface temperature front within 6 h. Submesoscale mixed-layer instabilities were present but seem too slow to completely remove the temperature gradient in this short time period. Dynamics such as a pressure-driven gravity current appear to be a likely mechanism behind the evolution of the front.

  19. Linking the Modern and Recent Record of Cabo Frio Upwelling with Local Climate and Biogeochemical Processes in Hypersaline Coastal Lagoons, Região dos Lagos, Rio de Janeiro, Brazil

    Science.gov (United States)

    McKenzie, J. A.; Nascimento, G. S.; Albuquerque, A. L.; Belem, A. L.; Carreira, R.; Eglinton, T. I.; Vasconcelos, C.

    2015-12-01

    A unique marine and lagoonal system along the coast east of Rio de Janeiro is being investigated to understand the impact of climatic variability on the South Atlantic carbon cycle and biomineralisation processes involved in carbonate precipitation in the hypersaline coastal lagoons. The region is dominated by a semi-arid microclimate attributed to the local coastal upwelling phenomenon near Cabo Frio. The intensity of the upwelling affects the hydrology of the annual water and biogeochemical cycles in the lagoons, as well as biogeochemical signals of environmental change recorded in both onshore and offshore sediments. Preliminary results of δ18O and δD values of water samples collected monthly in Lagoa Vermelha and Brejo do Espinho from 2011 to 2014 show lower values for waters corresponding to the wet season, reflecting increased input of meteoric water. The higher values for waters collected during the dry season reflect the greater amount of evaporation with increased seasonal aridity. Radiocarbon dating of Holocene marine and lagoonal cores indicates that Mg-carbonate precipitation in the lagoons is associated with high evaporation. Modern field observations for the last 3 years suggest that the amount of carbonate precipitation is correlated with evaporitic conditions associated with the upwelling phenomenon. A calibration study of hydrogen isotopic fractionation in the modern lagoons is underway to define a relationship between δDlipid of suspended particles and δDwater of associated water. This isotopic relationship will be applied to material obtained in cores from the lagoons. Offshore cores will be studied using well-tested paleotemperature proxies to evaluate the intensity of the upwelling during the Holocene. In summary, linking the coastal upwelling with the lagoonal hydrology has the potential to furnish important insights about the relationship between the local climate and paleoceanographic circulation associated with the regional carbon cycle.

  20. Bloom dynamics and life cycle strategies of two toxic dinoflagellates in a coastal upwelling system (NW Iberian Peninsula)

    Science.gov (United States)

    Bravo, Isabel; Fraga, Santiago; Isabel Figueroa, Rosa; Pazos, Yolanda; Massanet, Ana; Ramilo, Isabel

    2010-02-01

    A study of Gymnodinium catenatum and Alexandrium minutum blooms on the Galician coast was conducted from 2005 to 2007 in order to increase knowledge of the mechanisms governing recurrent blooms of these species. Considerable differences in their bloom dynamics were observed. G. catenatum blooms occurred in autumn and winter, following the pattern previously reported in the literature: they began off-shore and were advected to the Galician rias when a relaxation of the coastal upwelling occurred. On the other hand, A. minutum blooms developed inside embayments in spring and summer during the upwelling season and were associated with water stability and stratification. Both the vegetative population and the cyst distribution of A. minutum were related to less saline water from freshwater river outputs, which support a saline-gradient relationship postulated herein for this species. Dinoflagellates may produce both long-term double-walled cysts (resting) and short-term pellicle cysts. Resting cyst deposition and distribution in sediments showed that seeding occurred during the blooms of both species. However, the relationship between the cyst distribution in the sediments in Baiona Bay and the intensity and occurrence of G. catenatum blooms, suggests that the latter are not directly related to resting cyst germination. Moreover, the results presented in the present study point to other difference between the two species, such as the detection of pellicle cysts only for A. minutum. Finally, we discuss how the life cycle strategies of these two species may help to explain the different mechanisms of bloom formation reported herein.

  1. Connecting pigment composition and dissolved trace elements to phytoplankton population in the southern Benguela Upwelling zone (St. Helena Bay)

    Science.gov (United States)

    Das, Supriyo Kumar; Routh, Joyanto; Roychoudhury, Alakendra N.; Veldhuis, Marcel J. W.; Ismail, Hassan E.

    2017-12-01

    Rich in upwelled nutrients, the Southern Benguela is one of the most productive ecosystems in the world ocean. However, despite its ecological significance the role of trace elements influencing phytoplankton population in the Southern Benguela Upwelling System (SBUS) has not been thoroughly investigated. Here, we report pigment composition, macronutrients (nitrate, phosphate and silicate) and concentrations of dissolved Cd, Co, Fe and Zn during late austral summer and winter seasons in 2004 to understand the relationship between the selected trace elements and phytoplankton biomass in St. Helena Bay (SHB), which falls within the southern boundary of the SBUS. Chlorophyll a concentrations indicate higher phytoplankton biomass associated with high primary production during late summer in SHB where high diatom population is inferred from the presence of fucoxanthin. Diminished phytoplankton biomass and a shift from diatoms to dinoflagellates as the dominant phytoplankton taxa are indicated by diagnostic pigments during late winter. Dissolved trace elements (Cd, Co and Zn) and macronutrients play a significant role in phytoplankton biomass, and their distribution is affected by biological uptake and export of trace elements. Continuous uptake of Zn by diatoms may cause an onset of Zn depletion leading to a period of extended diatom proliferation during late summer. Furthermore, the transition from diatom to dinoflagellate dominated phytoplankton population is most likely facilitated by depletion of trace elements (Cd and Co) in the water column.

  2. SU(2) Yang-Mills solitons in R2 gravity

    Science.gov (United States)

    Perapechka, I.; Shnir, Ya.

    2018-05-01

    We construct new family of spherically symmetric regular solutions of SU (2) Yang-Mills theory coupled to pure R2 gravity. The particle-like field configurations possess non-integer non-Abelian magnetic charge. A discussion of the main properties of the solutions and their differences from the usual Bartnik-McKinnon solitons in the asymptotically flat case is presented. It is shown that there is continuous family of linearly stable non-trivial solutions in which the gauge field has no nodes.

  3. R2 effect-size measures for mediation analysis

    Science.gov (United States)

    Fairchild, Amanda J.; MacKinnon, David P.; Taborga, Marcia P.; Taylor, Aaron B.

    2010-01-01

    R2 effect-size measures are presented to assess variance accounted for in mediation models. The measures offer a means to evaluate both component paths and the overall mediated effect in mediation models. Statistical simulation results indicate acceptable bias across varying parameter and sample-size combinations. The measures are applied to a real-world example using data from a team-based health promotion program to improve the nutrition and exercise habits of firefighters. SAS and SPSS computer code are also provided for researchers to compute the measures in their own data. PMID:19363189

  4. R2 effect-size measures for mediation analysis.

    Science.gov (United States)

    Fairchild, Amanda J; Mackinnon, David P; Taborga, Marcia P; Taylor, Aaron B

    2009-05-01

    R(2) effect-size measures are presented to assess variance accounted for in mediation models. The measures offer a means to evaluate both component paths and the overall mediated effect in mediation models. Statistical simulation results indicate acceptable bias across varying parameter and sample-size combinations. The measures are applied to a real-world example using data from a team-based health promotion program to improve the nutrition and exercise habits of firefighters. SAS and SPSS computer code are also provided for researchers to compute the measures in their own data.

  5. Robotic Range Clearance Competition (R2C2)

    Science.gov (United States)

    2011-10-01

    MON TUE MAP MAP VEG automated vegetation clearance, automated Aug 10 Aug 11 WED THU Med VEG ia and Visitor D MAP ay Aug 12 FRI SURF...competitors will not be penalized if they enter this area. For the competition we will add an additional Pan , Tilt, Zoom (PTZ) Camera that will be...Johnston’s Corner –Gas Station Restaurant: Pizza, Fired Chicken , Subs 550 W Whalen St., Guernsey, WY 82214 (307) 836-3155 R2C2 Competitor Information

  6. R2 cosmology: Inflation without a phase transition

    International Nuclear Information System (INIS)

    Mijic, M.B.; Morris, M.S.; Suen, W.

    1986-01-01

    A pure gravity inflationary model for the Universe is examined which is based on adding an εR 2 term to the usual gravitational Lagrangian. The classical evolution is worked out, including eventual particle production and the subsequent join to radiation-dominated Friedmann behavior. We show that this model gives significant inflation essentially independent of initial conditions. The model has only one free parameter which is bounded from above by observational constraints on scalar and tensorial perturbations and from below by both the need for standard baryogenesis and the need for galaxy formation. This requires 10/sup 11/<ε/sup -1/2/<10/sup 13/ GeV

  7. Foundations of SQL Server 2008 R2 Business Intelligence

    CERN Document Server

    Fouche, Guy

    2011-01-01

    Foundations of SQL Server 2008 R2 Business Intelligence introduces the entire exciting gamut of business intelligence tools included with SQL Server 2008. Microsoft has designed SQL Server 2008 to be more than just a database. It's a complete business intelligence (BI) platform. The database is at its core, and surrounding the core are tools for data mining, modeling, reporting, analyzing, charting, and integration with other enterprise-level software packages. SQL Server 2008 puts an incredible amount of BI functionality at your disposal. But how do you take advantage of it? That's what this

  8. The OMZ and nutrient features as a signature of interannual and low-frequency variability in the Peruvian upwelling system

    Directory of Open Access Journals (Sweden)

    M. I. Graco

    2017-10-01

    Full Text Available Over the last decades, the Humboldt Current upwelling ecosystem, particularly the northern component off the coast of Peru, has drawn the interest of the scientific community because of its unique characteristics: it is the upwelling system with the biggest catch productivity despite the fact it is embedded in a shallow and intense oxygen minimum zone (OMZ. It is also an area of intense nitrogen loss and anammox activity and experiences large interannual variability associated with the equatorial remote forcing. In this context, we examined the oceanographic and biogeochemical variability associated with the OMZ off central Peru from a monthly time series (1996–2011 recorded off the coast of Callao (12° 02′ S, 77° 29′ W. The data reveal a rich spectrum of variability in the OMZ that includes frequencies ranging from seasonal to interannual scales. Due to the efficient oceanic teleconnection off Peru, the observed variability is interpreted in the light of an estimate of the equatorial Kelvin wave contribution to sea level anomalies considering the peculiarities of its vertical structure (i.e., the first two baroclinic modes. The span of the data set allows us to contrast two OMZ regimes. The strong regime is associated with the strong 1997–1998 equatorial Pacific El Niño, during which the OMZ adjusted to Kelvin-wave-induced downwelling conditions that switched off the upwelling and drastically reduced nutrient availability. The weak regime corresponds to the post-2000 period associated with the occurrence of moderate central Pacific El Niño events and enhanced equatorial Kelvin wave activity, in which mean upwelling conditions are maintained. It is shown that the characteristics of the coupling between physics and biogeochemistry is distinct between the two regimes with the weak regime being associated with a larger explained variance in biogeochemical properties not linearly related to the ENSO oceanic teleconnection. The

  9. How marine upwelling influences the distribution of Artemesia longinaris (Decapoda: Penaeoidea?

    Directory of Open Access Journals (Sweden)

    Gustavo S Sancinetti

    2014-05-01

    Full Text Available Upwelling events can occur in most of the oceans altering the water physical, chemical and sediment conditions and consequently the species communities dwelling the areas. For better understanding the behavior of populations inhabiting upwelling regions, the spatial and temporal distribution of a Penaeoidea shrimp was studied correlating it with the abiotic factors that vary during upwelling and non-upwelling periods in an area under influence of Cabo Frio upwelling. Bottom salinity and temperature, organic matter and sediment type from each station were sampled from March 2008 to February 2010, in six stations located between 5 and 45 m depth. The lowest temperatures were recorded during spring and summer for both years with temperature values lower than 19ºC. A total of 26,466 Artemesia longinaris shrimps were captured mainly in 10-35 m depth. Upwelling periods showed significant differences in abundance in relation to non-upwelling periods. The spatial distribution among stations varied according to the temperature with higher abundance in stations with values between 19 and 21ºC. The highest abundance of A. longinaris was recorded in spring and summer when intrusions of the cold waters of South Atlantic Central Waters (SACW were frequent. Thus, the effect of cold water of SACW boosted by the upwelling was a determinant factor in the spatial and temporal distribution of A. longinaris in the studied region.

  10. An upwelling-induced retention area off Senegal: A mechanism to ...

    African Journals Online (AJOL)

    Chlorophyll distribution peaks nearshore. This unique surface structure is interpreted as the result of a “double cell” structure in the upwelling vertical circulation: a first cell located at the shelf break, the main upwelling cell that brings cold and nutrient-rich subsurface water to the surface, and a second cell located inshore of ...

  11. Response of Mytilus edulis to enhanced phytoplankton availibility by controlled upwelling in an oligographic fjord

    NARCIS (Netherlands)

    Strohmeier, T.; Strand, Ø.; Alunno-Bruscia, M.; Duinker, A.; Rosland, R.; Jansen, H.M.

    2015-01-01

    The controlled upwelling of nutrient-rich deep water in oligotrophic coastal regions has been proposed as a means of increasing phytoplankton and, subsequently, bivalve aquaculture production. This was tested as part of a large-scale upwelling experiment in an oligotrophic environment (Lysefjord,

  12. Spatio-temporal variability of upwelling along the southwest coast of India based on satellite observations

    Science.gov (United States)

    Jayaram, Chiranjivi; Kumar, P. K. Dinesh

    2018-03-01

    Upwelling phenomenon along the eastern boundaries of global ocean has received greater attention in the recent times due to its environmental and economic significance in the global warming and the scenario of changing climate as opined by IPCC AR5. In this context, the availabile satellite data on sea surface winds, sea surface temperature (SST), sea level anomaly (SLA) and chlorophyll-a concentration (Chl-a), for the period 1981-2016 were analyzed to identify the coastal upwelling pattern in the Southeastern Arabian Sea (SEAS). Synergistic approach, using winds, SST, SLA and Chl-a revealed that strong upwelling was prevailing between 8°N and 12°N. During the study period, geographical differences existed in the peak values of upwelling favorable conditions considered for study. Analysis of the alongshore winds which are conducive for upwelling were observed to be curtailed towards the northern part of the study region between 2005 and 2010. Also, the strength of upwelling reduced during the strong ENSO years of 1997 and 2015. Linear regression based trend analysis of upwelling indices like Ekman transport, SST and chlorophyll along the coast, during the upwelling period, revealed slight increase in the strength towards the southern region while it decreased to the north during the study period.

  13. Regeneration of nitrogen by zooplankton and fish in the Northwest Africa and Peru upwelling ecosystems

    Energy Technology Data Exchange (ETDEWEB)

    Whitledge, T E

    1976-01-01

    The availability of nutrients and light are the dominant controlling factors of the levels of primary production in the ocean. In the lower latitudes where most coastal upwelling areas are located, the amount of light is seldom below the critical level to inhibit productivity so nutrients are often the limiting factor in phytoplankton growth. Nutrients utilized in primary productivity are derived from two sources in upwelling areas. Nutrients are introduced to the euphotic zone from depth by the physical processes that create upwelling and nutrients are recycled by biological organisms that inhabit the area. Nitrate introduced into the euphotic zone by upwelling supports new productivity while ammonium and other excretory products regenerated by zooplankton and nekton supports regenerated productivity. Results are reported from studies off the coast of Northwest Africa and Peru using /sup 15/N as a tracer that showed that recycled ammonium may fulfill nearly half of the daily nitrogen requirement of phytoplankton and upwelled nitrate may provide the other half.

  14. Variability of Iberian upwelling implied by ERA-40 and ERA-Interim reanalyses

    Directory of Open Access Journals (Sweden)

    José M. R. Alves

    2013-05-01

    Full Text Available The Regional Ocean Modeling System ocean model is used to simulate the decadal evolution of the regional waters in offshore Iberia in response to atmospheric fields given by ECMWF ERA-40 (1961–2001 and ERA-Interim (1989–2008 reanalyses. The simulated sea surface temperature (SST fields are verified against satellite AVHRR SST, and they are analysed to characterise the variability and trends of coastal upwelling in the region. Opposing trends in upwelling frequency are found at the northern limit, where upwelling has been decreasing in recent decades, and at its southern edge, where there is some evidence of increased upwelling. These results confirm previous observational studies and, more importantly, indicate that observed SST trends are not only due to changes in radiative or atmospheric heat fluxes alone but also due to changes in upwelling dynamics, suggesting that such a process may be relevant in climate change scenarios.

  15. Nutrient supply, surface currents, and plankton dynamics predict zooplankton hotspots in coastal upwelling systems

    Science.gov (United States)

    Messié, Monique; Chavez, Francisco P.

    2017-09-01

    A simple combination of wind-driven nutrient upwelling, surface currents, and plankton growth/grazing equations generates zooplankton patchiness and hotspots in coastal upwelling regions. Starting with an initial input of nitrate from coastal upwelling, growth and grazing equations evolve phytoplankton and zooplankton over time and space following surface currents. The model simulates the transition from coastal (large phytoplankton, e.g., diatoms) to offshore (picophytoplankton and microzooplankton) communities, and in between generates a large zooplankton maximum. The method was applied to four major upwelling systems (California, Peru, Northwest Africa, and Benguela) using latitudinal estimates of wind-driven nitrate supply and satellite-based surface currents. The resulting zooplankton simulations are patchy in nature; areas of high concentrations coincide with previously documented copepod and krill hotspots. The exercise highlights the importance of the upwelling process and surface currents in shaping plankton communities.

  16. Hot upwelling conduit beneath the Atlas Mountains, Morocco

    Science.gov (United States)

    Sun, Daoyuan; Miller, Meghan S.; Holt, Adam F.; Becker, Thorsten W.

    2014-11-01

    The Atlas Mountains of Morocco display high topography, no deep crustal root, and regions of localized Cenozoic alkaline volcanism. Previous seismic imaging and geophysical studies have implied a hot mantle upwelling as the source of the volcanism and high elevation. However, the existence, shape, and physical properties of an associated mantle anomaly are debated. Here we use seismic waveform analysis from a broadband deployment and geodynamic modeling to define the physical properties and morphology of the anomaly. The imaged low-velocity structure extends to ~200 km beneath the Atlas and appears ~350 K hotter than the ambient mantle with possible partial melting. It includes a lateral conduit, which suggests that the Quaternary volcanism arises from the upper mantle. Moreover, the shape and temperature of the imaged anomaly indicate that the unusually high topography of the Atlas Mountains is due to active mantle support.

  17. Relative contributions of local wind and topography to the coastal upwelling intensity in the northern South China Sea

    Science.gov (United States)

    Wang, Dongxiao; Shu, Yeqiang; Xue, Huijie; Hu, Jianyu; Chen, Ju; Zhuang, Wei; Zu, TingTing; Xu, Jindian

    2014-04-01

    Topographically induced upwelling caused by the interaction between large-scale currents and topography was observed during four cruises in the northern South China Sea (NSCS) when the upwelling favorable wind retreated. Using a high-resolution version of the Princeton Ocean Model, we investigate relative contributions of local wind and topography to the upwelling intensity in the NSCS. The results show that the topographically induced upwelling is sensitive to alongshore large-scale currents, which have an important contribution to the upwelling intensity. The topographically induced upwelling is comparable with the wind-driven upwelling at surface and has a stronger contribution to the upwelling intensity than the local wind does at bottom in the near-shore shelf region. The widened shelf to the southwest of Shanwei and west of the Taiwan Banks intensifies the bottom friction, especially off Shantou, which is a key factor for topographically induced upwelling in terms of bottom Ekman transport and Ekman pumping. The local upwelling favorable wind enhances the bottom friction as well as net onshore transport along the 50 m isobath, whereas it has less influence along the 30 m isobath. This implies the local wind is more important in upwelling intensity in the offshore region than in the nearshore region. The contribution of local upwelling favorable wind on upwelling intensity is comparable with that of topography along the 50 m isobath. The effects of local upwelling favorable wind on upwelling intensity are twofold: on one hand, the wind transports surface warm water offshore, and as a compensation of mass the bottom current transports cold water onshore; on the other hand, the wind enhances the coastal current, and the bottom friction in turn increases the topographically induced upwelling intensity.

  18. Artificial upwelling using offshore wind energy for mariculture applications

    Directory of Open Access Journals (Sweden)

    Álvaro Viúdez

    2016-09-01

    Full Text Available Offshore wind is proposed as an energy source to upwell nutrient-rich deep water to the ocean photic layers. A spar-buoy wind turbine with a rigid tube about 300 m long is proposed as a pipe to drive deep water up to the surface. The minimum energy required to uplift the water is the potential energy difference between surface waters inside and outside the pipe, which depends on the background density profile. The corresponding surface jump or hydraulic head, h, calculated for several analytical and experimental density profiles, is of the order of 10 cm. If the complete turbine power (of the order of several MW is used for raising the water (assuming a 100% pump efficiency, in a frictionless flow, very large water volumes, of the order of thousands of m3 s-1, will be transported to the photic layers. In a more realistic case, taking into account pipe friction in wide pipes, of the order of 10 m radius, and a power delivered to the fluid of 1 MW, the volume transport is still very large, about 500 m3 s-1. However, such a large amount of dense water could sink fast to aphotic layers due to vertical static instability (the fountain effect, ruining the enhancement of primary production. Hence, some ways to increase the turbulent entrainment and avoid the fountain effect are proposed. From the energetic viewpoint, artificial upwelling using offshore wind energy is a promising way to fertilize large open sea regions. This mariculture application is, however, severely subjected to atmosphere and ocean climatology, as well as to ecological dynamics. The general problem is multidisciplinary, and some important physical, engineering and ecological questions need to be seriously addressed to improve our confidence in the approach presented here.

  19. R2E strategy and activities during LS1

    International Nuclear Information System (INIS)

    Perrot, A.L.

    2012-01-01

    The level of the flux of hadrons with energy in the multi MeV range expected from the collimation system at Point 7 and from the collisions at the interaction Points 1, 5 and 8 will induce Single Event Errors (SEEs) of the standard electronics present in the equipment located around these Points. Such events would perturb LHC operation. As a consequence, within the framework of the R2E (Radiation to Electronics) Mitigation Project, the sensitive equipment will be shielded or relocated to safer areas. These mitigation activities will be performed mainly during Long Shutdown 1 (LS1). About 15 groups (including equipment owners) will be involved in these activities with work periods from a few days to several months. Some of them will have to work in parallel in several LHC points. This document presents these mitigation activities with their associated planning, organization process, and main concerns as identified today. (author)

  20. Renormalization group procedure for potential −g/r2

    Directory of Open Access Journals (Sweden)

    S.M. Dawid

    2018-02-01

    Full Text Available Schrödinger equation with potential −g/r2 exhibits a limit cycle, described in the literature in a broad range of contexts using various regularizations of the singularity at r=0. Instead, we use the renormalization group transformation based on Gaussian elimination, from the Hamiltonian eigenvalue problem, of high momentum modes above a finite, floating cutoff scale. The procedure identifies a richer structure than the one we found in the literature. Namely, it directly yields an equation that determines the renormalized Hamiltonians as functions of the floating cutoff: solutions to this equation exhibit, in addition to the limit-cycle, also the asymptotic-freedom, triviality, and fixed-point behaviors, the latter in vicinity of infinitely many separate pairs of fixed points in different partial waves for different values of g.

  1. 6. Investigation of R2M17 compounds

    International Nuclear Information System (INIS)

    Elemans, J.B.A.A.; Buschow, K.H.J.

    1975-01-01

    A discussion is presented of the different crystallographic forms that arise in the parent RM 5 (R rare earth including yttrium or thorium; M = Fe, Co or Ni) with CaCu 5 structure in which every third R is replaced by a pair of M. This results in the stoichiometric composition R 2 M 17 . Metallographic studies of well annealed and quenched specimens of CeFesub(x), HoFesub(x) and TmFesub(x) with x varying from 8 to 9.5 showed that only those with x = 8.5 consisted of one phase. Similar experiments with ThNisub(x) and YNisub(x), x varying from 6.5 to 8.5 revealed that in these cases, single phases were obtained with x = 7.5

  2. Physical structure and algae community of summer upwelling off eastern Hainan

    Science.gov (United States)

    Xu, H.; Liu, S.; Xie, Q.; Hong, B.; Long, T.

    2017-12-01

    The upwelling system is the most productive ecosystem along the continental shelf of the northern South China Sea Shelf. It brings nutrient from bottom to surface and blooms biotic community driven by summer monsoon. In this study, we present observed results of physical and biotic community structures during August, 2015 in the upwelling system along Hainan eastern coast, which is one the strongest upwelling systems in the northern South China Sea. By using hydrological data collected by CTD, we found a significant cold water tongue with high salinity which extended from offshore to 100 m isobaths. However, dissolved oxygen (DO) showed a sandwich structure in which high core of DO concentration appeared at the layer from 5 m to 30 m. It possibly was caused by the advection transport of high DO from adjacent area. Basically, this upwelling system was constrained at northern area of 18.8ºN in horizontal due to the weakening summer monsoon in August. In addition, we collected water sample at the upwelling area and measured algae categories and concentration by high performance liquid chromatography (HPLC). Results show the biotic community was dominated by five types of algae mainly, they were diatoms, dinoflagellates, green algae, prokaryotes and prochlorococcus. And different patterns of different algae were demonstrated. In the upwelling area, diatoms and prokaryotes show opposite structures, and more complex pattern for the rest three algae indicating an active biotic community in the upwelling system.

  3. Upwelling events, coastal offshore exchange, links to biogeochemical processes - Highlights from the Baltic Sea Science Congress

    Directory of Open Access Journals (Sweden)

    Bogdan Ołdakowski

    2008-03-01

    Full Text Available The Baltic Sea Science Congress was held at Rostock University, Germany, from 19 to 22 March 2007. In the session entitled"Upwelling events, coastal offshore exchange, links to biogeochemical processes" 20 presentations were given,including 7 talks and 13 posters related to the theme of the session.This paper summarises new findings of the upwelling-related studies reported in the session. It deals with investigationsbased on the use of in situ and remote sensing measurements as well as numerical modelling tools. The biogeochemicalimplications of upwelling are also discussed.Our knowledge of the fine structure and dynamic considerations of upwelling has increased in recent decades with the advent ofhigh-resolution modern measurement techniques and modelling studies. The forcing and the overall structure, duration and intensity ofupwelling events are understood quite well. However, the quantification of related transports and the contribution to the overall mixingof upwelling requires further research. Furthermore, our knowledge of the links between upwelling and biogeochemical processes is stillincomplete. Numerical modelling has advanced to the extent that horizontal resolutions of c. 0.5 nautical miles can now be applied,which allows the complete spectrum of meso-scale features to be described. Even the development of filaments can be describedrealistically in comparison with high-resolution satellite data.But the effect of upwelling at a basin scale and possible changes under changing climatic conditions remain open questions.

  4. Microstructure in Zircaloy Creep Tested in the R2 Reactor

    International Nuclear Information System (INIS)

    Pettersson, Kjell

    2004-12-01

    Tubular specimens of Zircaloy-4 have been creep tested in bending in the R2 reactor in Studsvik. The creep deformation in the reactor core is accelerated in comparison with creep deformation outside the reactor core. The possible mechanisms behind this behaviour are described briefly. In order to determine which the actual mechanism is, the microstructure of the material creep tested in the R2 reactor has been examined by transmission electron microscopy. Due to the bending, material subjected to both tensile and compressive stress during creep was available. Since some of the proposed mechanisms might give microstructures which are different when the material is subjected to compressive or tensile stress it was assumed that examination of both types of material would give valuable information with regard to the operating mechanism. The result of the examination was that in the as-irradiated condition there were no obvious differences detected between materials which had been deformed in tension or compression. After a heat treatment to coarsen the irradiation induced microstructure there were still no significant differences between the two types of material. However it was now observed that in addition to dislocation loops the microstructure also contained network dislocations which presumably had been invisible in the electron microscope before heat treatment due to the high density of small dislocation loops in this state. It is therefore concluded that the most probable mechanism for irradiation creep in this case is climb and glide of the network dislocations. The role of irradiation is two-fold: It accelerates climb due to the production of point defects of which more interstitials than vacancies arrive to the network dislocations stopped at an obstacles. This leads to a net climb after which a dislocation is released from the obstacle and an amount of glide takes place. The second effect is the production of loops which serve as an increasing density of

  5. A Holocene record of ocean productivity and upwelling from the northern California continental slope

    Science.gov (United States)

    Addison, Jason A.; Barron, John A.; Finney, Bruce P.; Kusler, Jennifer E.; Bukry, David; Heusser, Linda E.; Alexander, Clark R.

    2018-01-01

    The Holocene upwelling history of the northern California continental slope is examined using the high-resolution record of TN062-O550 (40.9°N, 124.6°W, 550 m water depth). This 7-m-long marine sediment core spans the last ∼7500 years, and we use it to test the hypothesis that marine productivity in the California Current System (CCS) driven by coastal upwelling has co-varied with Holocene millennial-scale warm intervals. A combination of biogenic sediment concentrations (opal, total organic C, and total N), stable isotopes (organic matter δ13C and bulk sedimentary δ15N), and key microfossil indicators of upwelling were used to test this hypothesis. The record of biogenic accumulation in TN062-O550 shows considerable Holocene variability despite being located within 50 km of the mouth of the Eel River, which is one of the largest sources of terrigenous sediment to the Northeast Pacific Ocean margin. A key time interval beginning at ∼2900 calibrated years before present (cal yr BP) indicates the onset of modern upwelling in the CCS, and this period also corresponds to the most intense period of upwelling in the last 7500 years. When these results are placed into a regional CCS context during the Holocene, it was found that the timing of upwelling intensification at TN062-O550 corresponds closely to that seen at nearby ODP Site 1019, as well as in the Santa Barbara Basin of southern California. Other CCS records with less refined age control show similar results, which suggest late Holocene upwelling intensification may be synchronous throughout the CCS. Based on the strong correspondence between the alkenone sea surface temperature record at ODP Site 1019 and the onset of late Holocene upwelling in northern California, we suggest that CCS warming may be conducive to upwelling intensification, though future changes are unclear as the mechanisms forcing SST variability may differ.

  6. The R + var-epsilon R2 cosmology

    International Nuclear Information System (INIS)

    Morris, M.S.

    1988-01-01

    This thesis presents the study of a model cosmology based on the R + var-epsilon R 2 gravitational Lagrangian. It may be roughly divided into two distinct parts. First, the classical inflationary scenario is developed. Then, the formalism of quantum cosmology is employed to determined initial conditions for the classical model. In the work on the classical model, the evolution equations for an isotropic and homogeneous universe are solved to exhibit both early-time inflation and a smooth transition to subsequent radiation-dominated behavior. Then perturbations on this isotropic background are evolved through the model to provide constraints on the model parameters from the observational limits on anisotropy today. In the work on the wave function, the two boundary conditions of Vilenkin and Hartle and Hawking are compared. The wave functions obtained are restricted to the initial edge of classical Lorentzian inflationary trajectories as distributions over initial conditions for the classical inflationary model. It is found that Vilenkin's wave function prefers the universe to undergo a great deal of inflation, whereas Hartle and Hawking's wave function prefers the universe to undergo little inflation. Finally, both boundary conditions are shown to require the inhomogeneous perturbative modes start out in their ground states

  7. Scalaron from R2-gravity as a heavy field

    Science.gov (United States)

    Pi, Shi; Zhang, Ying-li; Huang, Qing-Guo; Sasaki, Misao

    2018-05-01

    We study a model of inflation in which a scalar field χ is non-minimally coupled to Starobinsky's R2 gravity. After transforming it to the Einstein frame, a new scalar field, the scalaron phi, will appear and couple to χ with a nontrivial field metric, while χ acquires a positive mass via the non-minimal coupling. Initially inflation occurs along the phi direction with χ trapped near its origin by this induced mass. After phi crosses a critical value, it starts rolling down rapidly and proceeds to damped oscillations around an effective local minimum determined by the value of χ, while inflation still continues, driven by the χ field at this second stage where the effect of the non-minimal coupling becomes negligible. The presence of the damped oscillations during the transition from the first to second stage of inflation causes enhancement and oscillation features in the power spectrum of the curvature perturbation. Assuming that the oscillations may be treated perturbatively, we calculate these features by using the δ N formalism, and discuss its observational implications to large scale CMB anomalies or primordial black hole formation, depending on the scale of the features.

  8. Plants as Indicators of Past and Present Zones of Upwelling Soil CO2 at the ZERT Facility

    Science.gov (United States)

    Apple, M. E.; Sharma, B.; Zhou, X.; Shaw, J. A.; Dobeck, L.; Cunnningham, A.; Spangler, L.; ZERT Team

    2011-12-01

    By their very nature, photosynthetic plants are sensitive and responsive to CO2, which they fix during the Calvin-Benson cycle. Responses of plants to CO2 are valuable tools in the surface detection of upwelling and leaking CO2 from carbon sequestration fields. Plants exposed to upwelling CO2 rapidly exhibit signs of stress such as changes in stomatal conductance, hyperspectral signatures, pigmentation, and viability (Lakkaraju et al. 2010; Male et al. 2010). The Zero Emission Research and Technology (ZERT) site in Bozeman, MT is an experimental facility for surface detection of CO2 where 0.15 ton/day of CO2 was released (7/19- 8/15/2010, and 7/18 - 8/15/2011) from a 100m horizontal injection well, (HIW), 1.5 m underground with deliberate leaks of CO2 at intervals, and from a vertical injector, (VIW), (6/3-6/24/2010). Soil CO2 concentrations reached 16%. Plants at ZERT include Taraxacum officinale (Dandelion), Dactylis glomerata (Orchard Grass), Poa pratensis, (Kentucky Bluegrass), Phleum pratense (Timothy), Bromus japonicus (Japanese Brome), Medicago sativa (Alfalfa) and Cirsium arvense (Canadian Thistle). Dandelion leaves above the zones of upwelling CO2 at the HIW and the VIW changed color from green to reddish-purple (indicative of an increase in anthocyanins) to brown as they senesced within two weeks of CO2 injection. Their increased stomatal conductance along with their extensive surface area combined to make water loss occur quickly following injection of CO2. Xeromorphic grass leaves were not as profoundly affected, although they did exhibit changes in stomatal conductance, accelerated loss of chlorophyll beyond what would normally occur with seasonal senescence, and altered hyperspectral signatures. Within two weeks of CO2 injection at the HIW and the VIW, hot spots formed, which are circular zones of visible leaf senescence that appear at zones of upwelling CO2. The hot spots became more pronounced as the CO2 injection continued, and were detectable

  9. Lagrangian pathways of upwelling in the Southern Ocean

    Science.gov (United States)

    Viglione, Giuliana A.; Thompson, Andrew F.

    2016-08-01

    The spatial and temporal variability of upwelling into the mixed layer in the Southern Ocean is studied using a 1/10° ocean general circulation model. Virtual drifters are released in a regularly spaced pattern across the Southern Ocean at depths of 250, 500, and 1000 m during both summer and winter months. The drifters are advected along isopycnals for a period of 4 years, unless they outcrop into the mixed layer, where lateral advection and a parameterization of vertical mixing are applied. The focus of this study is on the discrete exchange between the model mixed layer and the interior. Localization of interior-mixed layer exchange occurs downstream of major topographic features across the Indian and Pacific basins, creating "hotspots" of outcropping. Minimal outcropping occurs in the Atlantic basin, while 59% of drifters outcrop in the Pacific sector and in Drake Passage (the region from 140° W to 40° W), a disproportionately large amount even when considering the relative basin sizes. Due to spatial and temporal variations in mixed layer depth, the Lagrangian trajectories provide a statistical measure of mixed layer residence times. For each exchange into the mixed layer, the residence time has a Rayleigh distribution with a mean of 30 days; the cumulative residence time of the drifters is 261 ± 194 days, over a period of 4 years. These results suggest that certain oceanic gas concentrations, such as CO2 and 14C, will likely not reach equilibrium with the atmosphere before being resubducted.

  10. Ekman Upwelling, QuikSCAT SeaWinds, 0.25 degrees, Global, Science Quality

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes science quality Ekman current (in zonal, meridional, and modulus sets) and Ekman upwelling data. This data begins with wind velocity...

  11. Upwelling along the western Indian continental margin and its geological record - a summary

    Digital Repository Service at National Institute of Oceanography (India)

    Setty, M.G

    sediment components can be correlated to the characteristics of the water masses and, thereby, to the intensity and magnitude of upwelling. Benthic and planktonic foraminifers are particularly useful indicators; e.g., the invasion of immigrant populations...

  12. Ekman Upwelling, METOP ASCAT, 0.25 degrees, Global, Near Real Time

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes near real time Ekman current (in zonal, meridional, and modulus sets) and Ekman upwelling data. This data begins with wind velocity...

  13. Upwelling and associated hydrography along the west coast of india during southwest monsoon, 1999

    Digital Repository Service at National Institute of Oceanography (India)

    Maheswaran, P.A.; Rajesh, G.; Revichandran, C.; Nair, K.K.C.

    ) and 1.2 degrees C (off Mangalore) from the farthest stations, indicating the presence of upwelled water near the coast. Well defined thermal, saline and density fronts were visible. Relatively high offshore transport was observed off Kanyakumari...

  14. On an upwelling front along the west coast of India during later part of southwest monsoon

    Digital Repository Service at National Institute of Oceanography (India)

    Unnikrishnan, A.S.; Antony, M.K.

    A coastal front, associated with upwelling, is identified from the observed thermal field along the west coast of India during September, 1987. The front, which is seen very clearly upto a depth of about 75 m, has a horizontal gradient...

  15. Observational evidence of upwelling off the southwest coast of India during June-July 2006

    Digital Repository Service at National Institute of Oceanography (India)

    Lekshmi, S.; Smitha, B.R.; Revichandran, C.

    transects off Thiruvananthapuram (8.5 degrees N) and off Koilam (9 degrees N), during June 25th-6th July 2006. Observed upwelling parameters (local temperature anomalies, salinity, isothermal layer depth (ILD), Mixed Layer Depth (MLD), isotherm slope...

  16. Discriminating the biophysical impacts of coastal upwelling and mud banks along the southwest coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    Karnan, C.; Jyothibabu, R.; Arunpandi, N.; Jagadeesan, L.; Muraleedharan, K.R.; Pratihary, A.K.; Balachandran, K.K.; Naqvi, S.W.A.

    Coastal upwelling and mud banks are two oceanographic processes concurrently operating along certain stretches of the southwest (Kerala) coast of India during the Southwest Monsoon period (June-September), facilitating significant enhancement...

  17. Intensive aggregate formation with low vertical flux during an upwelling-induced diatom bloom

    DEFF Research Database (Denmark)

    Kiørboe, Thomas; Tiselius, P.; Mitchell-Innes, B.

    1998-01-01

    of turbulent shear in the ocean such stickiness coefficients predict very high specific coagulation rates (0.3 d(-1)). In situ video observation demonstrated the occurrence of abundant diatom aggregates with surface water concentrations between 1,000 and 3,000 ppm. Despite the very high concentration......The surfaces of most pelagic diatoms are sticky at times and may therefore form rapidly settling aggregates by physical coagulation. Stickiness and aggregate formation may be particularly adaptive in upwelling systems by allowing the retention of diatom populations in the vicinity of the upwelling...... center. We therefore hypothesized that upwelling diatom blooms are terminated by aggregate formation and rapid sedimentation. We monitored the development of a maturing diatom (mainly Chaetoceros spp.) bloom in the Benguela upwelling current during 7 d in February. Chlorophyll concentrations remained...

  18. A long history of equatorial deep-water upwelling in the Pacific Ocean

    Science.gov (United States)

    Zhang, Yi Ge; Pagani, Mark; Henderiks, Jorijntje; Ren, Haojia

    2017-06-01

    Cold, nutrient- and CO2-rich waters upwelling in the eastern equatorial Pacific (EEP) give rise to the Pacific cold tongue. Quasi-periodic subsidence of the thermocline and attenuation in wind strength expressed by El Niño conditions decrease upwelling rates, increase surface-water temperatures in the EEP, and lead to changes in regional climates both near and far from the equatorial Pacific. EEP surface waters have elevated CO2 concentrations during neutral (upwelling) or La Niña (strong upwelling) conditions. In contrast, approximate air-sea CO2 equilibrium characterizes El Niño events. One hypothesis proposes that changes in physical oceanography led to the establishment of a deep tropical thermocline and expanded mixed-layer prior to 3 million years ago. These effects are argued to have substantially reduced deep-water upwelling rates in the EEP and promoted a "permanent El Niño-like" climate state. For this study, we test this supposition by reconstructing EEP "excess CO2" and upwelling history for the past 6.5 million years using the alkenone-pCO2 methodology. Contrary to previous assertions, our results indicate that average temporal conditions in the EEP over the past ∼6.5 million years were characterized by substantial CO2 disequilibrium and high nutrient delivery to surface waters - characteristics that imply strong upwelling of deep waters. Upwelling appears most vigorous between ∼6.5 to 4.5 million years ago coinciding with high accumulation rates of biogenic material during the late Miocene - early Pliocene "biogenic bloom".

  19. Sardine (Sardina pilchardus) larval dispersal in the Iberian upwelling system, using coupled biophysical techniques

    Science.gov (United States)

    Santos, A. M. P.; Nieblas, A.-E.; Verley, P.; Teles-Machado, A.; Bonhommeau, S.; Lett, C.; Garrido, S.; Peliz, A.

    2018-03-01

    The European sardine (Sardina pilchardus) is the most important small pelagic fishery of the Western Iberia Upwelling Ecosystem (WIUE). Recently, recruitment of this species has declined due to changing environmental conditions. Furthermore, controversies exist regarding its population structure with barriers thought to exist between the Atlantic-Iberian Peninsula, Northern Africa, and the Mediterranean. Few studies have investigated the transport and dispersal of sardine eggs and larvae off Iberia and the subsequent impact on larval recruitment variability. Here, we examine these issues using a Regional Ocean Modeling System climatology (1989-2008) coupled to the Lagrangian transport model, Ichthyop. Using biological parameters from the literature, we conduct simulations that investigate the effects of spawning patchiness, diel vertical migration behaviors, and egg buoyancy on the transport and recruitment of virtual sardine ichthyoplankton on the continental shelf. We find that release area, release depth, and month of release all significantly affect recruitment. Patchiness has no effect and diel vertical migration causes slightly lower recruitment. Egg buoyancy effects are significant and act similarly to depth of release. As with other studies, we find that recruitment peaks vary by latitude, explained here by the seasonal variability of offshore transport. We find weak, continuous alongshore transport between release areas, though a large proportion of simulated ichthyoplankton transport north to the Cantabrian coast (up to 27%). We also show low level transport into Morocco (up to 1%) and the Mediterranean (up to 8%). The high proportion of local retention and low but consistent alongshore transport supports the idea of a series of metapopulations along this coast.

  20. Pathways of upwelling deep waters to the surface of the Southern Ocean

    Science.gov (United States)

    Tamsitt, Veronica; Drake, Henri; Morrison, Adele; Talley, Lynne; Dufour, Carolina; Gray, Alison; Griffies, Stephen; Mazloff, Matthew; Sarmiento, Jorge; Wang, Jinbo; Weijer, Wilbert

    2017-04-01

    Upwelling of Atlantic, Indian and Pacific deep waters to the sea surface in the Southern Ocean closes the global overturning circulation and is fundamentally important for oceanic uptake of anthropogenic carbon and heat, nutrient resupply for sustaining oceanic biological production, and the melt rate of ice shelves. Here we go beyond the two-dimensional view of Southern Ocean upwelling, to show detailed Southern Ocean upwelling pathways in three dimensions, using hydrographic observations and particle tracking in high-resolution ocean and climate models. The northern deep waters enter the Antarctic Circumpolar Current (ACC) via narrow southward currents along the boundaries of the three ocean basins, before spiraling southeastward and upward through the ACC. Upwelling is greatly enhanced at five major topographic features, associated with vigorous mesoscale eddy activity. Deep water reaches the upper ocean predominantly south of the southern ACC boundary, with a spatially nonuniform distribution, regionalizing warm water supply to Antarctic ice shelves and the delivery of nutrient and carbon-rich water to the sea surface. The timescale for half of the deep water to upwell from 30°S to the mixed layer is on the order of 60-90 years, which has important implications for the timescale for signals to propagate through the deep ocean. In addition, we quantify the diabatic transformation along particle trajectories, to identify where diabatic processes are important along the upwelling pathways.

  1. Evaluation of role 2 (R2) medical resources in the Afghanistan combat theater: Initial review of the joint trauma system R2 registry.

    Science.gov (United States)

    Mann-Salinas, Elizabeth A; Le, Tuan D; Shackelford, Stacy A; Bailey, Jeffrey A; Stockinger, Zsolt T; Spott, Mary Ann; Wirt, Michael D; Rickard, Rory; Lane, Ian B; Hodgetts, Timothy; Cardin, Sylvain; Remick, Kyle N; Gross, Kirby R

    2016-11-01

    A Role 2 registry (R2R) was developed in 2008 by the US Joint Trauma System (JTS). The purpose of this project was to undertake a preliminary review of the R2R to understand combat trauma epidemiology and related interventions at these facilities to guide training and optimal use of forward surgical capability in the future. A retrospective review of available JTS R2R records; the registry is a convenience sample entered voluntarily by members of the R2 units. Patients were classified according to basic demographics, affiliation, region where treatment was provided, mechanism of injury, type of injury, time and method of transport from point of injury (POI) to R2 facility, interventions at R2, and survival. Analysis included trauma patients aged ≥18 years or older wounded in year 2008 to 2014, and treated in Afghanistan. A total of 15,404 patients wounded and treated in R2 were included in the R2R from February 2008 to September 2014; 12,849 patients met inclusion criteria. The predominant patient affiliations included US Forces, 4,676 (36.4%); Afghan Forces, 4,549 (35.4%); and Afghan civilians, 2,178 (17.0%). Overall, battle injuries predominated (9,792 [76.2%]). Type of injury included penetrating, 7,665 (59.7%); blunt, 4,026 (31.3%); and other, 633 (4.9%). Primary mechanism of injury included explosion, 5,320 (41.4%); gunshot wounds, 3,082 (24.0%); and crash, 1,209 (9.4%). Of 12,849 patients who arrived at R2, 167 (1.3%) were dead; of 12,682 patients who were alive upon arrival, 342 (2.7%) died at R2. This evaluation of the R2R describes the patient profiles of and common injuries treated in a sample of R2 facilities in Afghanistan. Ongoing and detailed analysis of R2R information may provide evidence-based guidance to military planners and medical leaders to best prepare teams and allocate R2 resources in future operations. Given the limitations of the data set, conclusions must be interpreted in context of other available data and analyses, not in isolation

  2. Implications of Upwells as Hydrodynamic Jets in a Pulse Jet Mixed System

    Energy Technology Data Exchange (ETDEWEB)

    Pease, Leonard F. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Bamberger, Judith A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Minette, Michael J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2015-08-01

    This report evaluates the physics of the upwell flow in pulse jet mixed systems in the Hanford Tank Waste Treatment and Immobilization Plant (WTP). Although the initial downward flow and radial flow from pulse jet mixers (PJMs) has been analyzed in some detail, the upwells have received considerably less attention despite having significant implications for vessel mixing. Do the upwells behave like jets? How do the upwells scale? When will the central upwell breakthrough? What proportion of the vessel is blended by the upwells themselves? Indeed, how the physics of the central upwell is affected by multiple PJMs (e.g., six in the proposed mixing vessels), non-Newtonian rheology, and significant multicomponent solids loadings remain unexplored. The central upwell must satisfy several criteria to be considered a free jet. First, it must travel for several diameters in a nearly constant direction. Second, its velocity must decay with the inverse of elevation. Third, it should have an approximately Gaussian profile. Fourth, the influence of surface or body forces must be negligible. A combination of historical data in a 12.75 ft test vessel, newly analyzed data from the 8 ft test vessel, and conservation of momentum arguments derived specifically for PJM operating conditions demonstrate that the central upwell satisfies these criteria where vigorous breakthrough is achieved. An essential feature of scaling from one vessel to the next is the requirement that the underlying physics does not change adversely. One may have confidence in scaling if (1) correlations and formulas capture the relevant physics; (2) the underlying physics does not change from the conditions under which it was developed to the conditions of interest; (3) all factors relevant to scaling have been incorporated, including flow, material, and geometric considerations; and (4) the uncertainty in the relationships is sufficiently narrow to meet required specifications. Although the central upwell

  3. Coastal upwelling ecosystems are often identified as regions ...

    African Journals Online (AJOL)

    spamer

    ... are often identified as regions susceptible to seasonal blooms of harmful ... that the bay acts as a net importer of bottom water and net exporter of surface waters over a synoptic cycle. This ... waves or wind stress on the surface friction layer.

  4. The Benguela upwelling ecosystem lies adjacent to the south ...

    African Journals Online (AJOL)

    denise

    increase, but it is still below the levels of the early ... variability but no trends in either subsystem, and the seasonal pattern was similar for both ..... good spatial coverage of sardine landings, with a sig- ..... periods of simultaneous change in environmental pa- ..... monotypic sardines, Sardina and Sardinops: their taxonomy,.

  5. The NAO Influence on the Early to Mid-Holocene North Atlantic Coastal Upwelling

    Science.gov (United States)

    Hernandez, A.; Cachão, M.; Sousa, P.; Trigo, R. M.; Freitas, M. C.

    2017-12-01

    Coastal upwelling regions yield some of the oceanic most productive ecosystems, being crucial for the worldwide social and economic development. Most upwelling systems, emerging cold nutrient-rich deep waters, are located in the eastern boundaries of the Atlantic and Pacific basins, and are driven by meridional wind fields parallel to the coastal shore. These winds are associated with the subsiding branch of the large-scale Anticyclonic high pressure systems that dominate the subtropical ocean basins, and therefore can be displaced or intensified within the context of past and future climate changes. However, the role of the current global warming influencing the coastal upwelling is, as yet, unclear. Therefore it is essential to derive a long-term perspective, beyond the era of instrumental measurements, to detect similar warm periods in the past that have triggered changes in the upwelling patterns. In this work, the upwelling dynamics in the Iberian North Atlantic margin during the early and mid-Holocene is reconstructed, using calcareous nannofossils from a decadally resolved estuarine sediment core located in southwestern Portugal. Results suggest that the coastal dynamics reflects changes in winds direction likely related to shifts in the NAO-like conditions. Furthermore, the reconstructed centennial-scale variations in the upwelling are synchronous with changes in solar irradiance, a major external forcing factor of the climate system that is known to exert influence in atmospheric circulation patterns. In addition, these proxy-based data interpretations are in agreement with wind field and solar irradiance simulation modelling for the mid-Holocene. Therefore, the conclusion that the solar activity via the NAO modulation controlled the North Atlantic upwelling of western Iberia during the early and mid-Holocene at decadal to centennial timescales can be derived. The financial support for attending this meeting was possible through FCT project UID/GEO/50019

  6. R2*-relaxometry of the pancreas in patients with human hemochromatosis protein associated hereditary hemochromatosis

    Energy Technology Data Exchange (ETDEWEB)

    Henninger, B., E-mail: benjamin.henninger@i-med.ac.at [Department of Radiology, Medical University of Innsbruck, Anichstraße 35, 6020 Innsbruck (Austria); Rauch, S. [Department of Radiology, Medical University of Innsbruck, Anichstraße 35, 6020 Innsbruck (Austria); Zoller, H. [Department of Internal Medicine, Medical University of Innsbruck, Anichstraße 35, 6020 Innsbruck (Austria); Plaikner, M.; Jaschke, W.; Kremser, C. [Department of Radiology, Medical University of Innsbruck, Anichstraße 35, 6020 Innsbruck (Austria)

    2017-04-15

    Highlights: • MRI with R2* relaxometry is suitable to detect iron overload of the pancreas. • Pancreatic iron overload can be present in HFE associated hereditary hemochromatosis. • R2* relaxometry of the pancreas should then be performed when liver iron is present. • It can be omitted in cases with no sign of hepatic iron. - Abstract: Purpose: To evaluate pancreatic iron in patients with human hemochromatosis protein associated hereditary hemochromatosis (HHC) using R2* relaxometry. Materials and methods: 81 patients (58 male, 23 female; median age 49.5, range 10–81 years) with HHC were retrospectively studied. All underwent 1.5 T magnetic resonance imaging (MRI) of the abdomen. A fat-saturated multi-gradient echo sequence with 12 echoes (TR = 200 ms; TE-initial 0.99 ms; Delta-TE 1.41 ms; 12 echoes; flip-angle: 20°) was used for the R2* quantification of the liver and the pancreas. Parameter maps were analyzed using regions of interest (3 in the liver and 2 in the pancreas) and R2* values were correlated. Results: 59/81 patients had a liver R2* ≥ 70 1/s of which 10/59 patients had a pancreas R2* ≥ 50 1/s. No patient presented with a liver R2* < 70 1/s and pancreas R2* ≥ 50 1/s. All patients with pancreas R2* values ≥ 50 1/s had liver R2* values ≥ 70 1/s. ROC analysis resulted in a threshold of 209.4 1/s for liver R2* values to identify HFE positive patients with pancreas R2* values ≥ 50 1/s with a median specificity of 78.87% and a median sensitivity of 90%. Conclusion: In patients with HHC R2* relaxometry of the pancreas should be performed when liver iron overload is present and can be omitted in cases with no sign of hepatic iron.

  7. R2*-relaxometry of the pancreas in patients with human hemochromatosis protein associated hereditary hemochromatosis

    International Nuclear Information System (INIS)

    Henninger, B.; Rauch, S.; Zoller, H.; Plaikner, M.; Jaschke, W.; Kremser, C.

    2017-01-01

    Highlights: • MRI with R2* relaxometry is suitable to detect iron overload of the pancreas. • Pancreatic iron overload can be present in HFE associated hereditary hemochromatosis. • R2* relaxometry of the pancreas should then be performed when liver iron is present. • It can be omitted in cases with no sign of hepatic iron. - Abstract: Purpose: To evaluate pancreatic iron in patients with human hemochromatosis protein associated hereditary hemochromatosis (HHC) using R2* relaxometry. Materials and methods: 81 patients (58 male, 23 female; median age 49.5, range 10–81 years) with HHC were retrospectively studied. All underwent 1.5 T magnetic resonance imaging (MRI) of the abdomen. A fat-saturated multi-gradient echo sequence with 12 echoes (TR = 200 ms; TE-initial 0.99 ms; Delta-TE 1.41 ms; 12 echoes; flip-angle: 20°) was used for the R2* quantification of the liver and the pancreas. Parameter maps were analyzed using regions of interest (3 in the liver and 2 in the pancreas) and R2* values were correlated. Results: 59/81 patients had a liver R2* ≥ 70 1/s of which 10/59 patients had a pancreas R2* ≥ 50 1/s. No patient presented with a liver R2* < 70 1/s and pancreas R2* ≥ 50 1/s. All patients with pancreas R2* values ≥ 50 1/s had liver R2* values ≥ 70 1/s. ROC analysis resulted in a threshold of 209.4 1/s for liver R2* values to identify HFE positive patients with pancreas R2* values ≥ 50 1/s with a median specificity of 78.87% and a median sensitivity of 90%. Conclusion: In patients with HHC R2* relaxometry of the pancreas should be performed when liver iron overload is present and can be omitted in cases with no sign of hepatic iron.

  8. Summertime sea surface temperature fronts associated with upwelling around the Taiwan Bank

    Science.gov (United States)

    Lan, Kuo-Wei; Kawamura, Hiroshi; Lee, Ming-An; Chang, Yi; Chan, Jui-Wen; Liao, Cheng-Hsin

    2009-04-01

    It is well known that upwelling of subsurface water is dominant around the Taiwan Bank (TB) and the Penghu (PH) Islands in the southern Taiwan Strait in summertime. Sea surface temperature (SST) frontal features and related phenomena around the TB upwelling and the PH upwelling were investigated using long-term AVHRR (1996-2005) and SeaWiFS (1998-2005) data received at the station of National Taiwan Ocean University. SST and chlorophyll-a (Chl-a) images with a spatial resolution of 0.01° were generated and used for the monthly SST and Chl-a maps. SST fronts were extracted from each SST images and gradient magnitudes (GMs); the orientations were derived for the SST fronts. Monthly maps of cold fronts where the cooler SSTs were over a shallower bottom were produced from the orientation. Areas with high GMs (0.1-0.2 °C/km) with characteristic shapes appeared at geographically fixed positions around the TB/PH upwelling region where SSTs were lower than the surrounding waters. The well-shaped high GMs corresponded to cold fronts. Two areas with high Chl-a were found around the TB and PH Islands. The southern border of the high-Chl-a area in the TB upwelling area was outlined by the high-GM area. Shipboard measurements of snapshot vertical sections of temperature (T) and salinity (S) along the PH Channel showed a dome structure east of PH Islands, over which low SST and high GM in the maps of the corresponding month were present. Clear evidence of upwelling (vertically uniform distributions of T and S) was indicated at the TB edge in the T and S sections close to TB upwelling. This case of upwelling may be caused by bottom currents ascending the TB slope as pointed out by previous studies. The position of low SSTs in the monthly maps matched the upwelling area, and the high GMs corresponded to the area of eastern surface fronts in the T/S sections.

  9. Using R2* values to evaluate brain tumours on magnetic resonance imaging: Preliminary results

    International Nuclear Information System (INIS)

    Liu, Zhenghua; Liao, Haibo; Yin, Jianhua; Li, Yanfang

    2014-01-01

    To determine the usefulness of the R2* value in assessing the histopathological grade of glioma at magnetic resonance imaging and differentiating various brain tumours. Sixty-four patients with brain tumours underwent R2* mapping and diffusion-weighted imaging examinations. ANOVA was performed to analyse R2* values among four groups of glioma and among high-grade gliomas (grades III and IV), low-grade gliomas (grades I and II), meningiomas, and brain metastasis. Spearman's correlation coefficients were used to determine the relationships between the R2* values or apparent diffusion coefficient (ADC) and the histopathological grade of gliomas. R2* values of low- and high-grade gliomas were analysed with the receiver-operator characteristic curve. R2* values were significantly different among high-grade gliomas, low-grade gliomas, meningiomas, and brain metastasis, but not between grade I and grade II or between grade III and grade IV. The R2* value (18.73) of high-grade gliomas provided a very high sensitivity and specificity for differentiating low-grade gliomas. A strong correlation existed between the R2* value and the pathological grade of gliomas. R2* mapping is a useful sequence for determining grade of gliomas and in distinguishing benign from malignant tumours. R2* values are better than ADC for characterising gliomas. (orig.)

  10. Statistical downscaling of sea-surface wind over the Peru-Chile upwelling region: diagnosing the impact of climate change from the IPSL-CM4 model

    Energy Technology Data Exchange (ETDEWEB)

    Goubanova, K. [CNES/CNRS/IRD/UPS, Laboratoire d' Etudes en Geophysique et Oceanographie Spatiale, Toulouse (France); Instituto del Mar del Peru, Callao (Peru); Echevin, V.; Terray, P. [IPSL/UPMC/IRD, Laboratoire d' Oceanographie et de Climatologie, Experimentation et Approches Numeriques, Paris (France); Dewitte, B. [CNES/CNRS/IRD/UPS, Laboratoire d' Etudes en Geophysique et Oceanographie Spatiale, Toulouse (France); Instituto del Mar del Peru, Callao (Peru); Instituto Geofisico del Peru, Lima (Peru); Codron, F. [UPMC/CNRS, Laboratoire de Meteorologie Dynamique, Paris (France); Takahashi, K. [Instituto Geofisico del Peru, Lima (Peru); Vrac, M. [IPSL/CNRS/CEA/UVSQ, Laboratoire des Sciences du Climat et de l' Environnement, Gif-sur-Yvette (France)

    2011-04-15

    The key aspect of the ocean circulation off Peru-Chile is the wind-driven upwelling of deep, cold, nutrient-rich waters that promote a rich marine ecosystem. It has been suggested that global warming may be associated with an intensification of upwelling-favorable winds. However, the lack of high-resolution long-term observations has been a limitation for a quantitative analysis of this process. In this study, we use a statistical downscaling method to assess the regional impact of climate change on the sea-surface wind over the Peru-Chile upwelling region as simulated by the global coupled general circulation model IPSL-CM4. Taking advantage of the high-resolution QuikSCAT wind product and of the NCEP reanalysis data, a statistical model based on multiple linear regressions is built for the daily mean meridional and zonal wind at 10 m for the period 2000-2008. The large-scale 10 m wind components and sea level pressure are used as regional circulation predictors. The skill of the downscaling method is assessed by comparing with the surface wind derived from the ERS satellite measurements, with in situ wind observations collected by ICOADS and through cross-validation. It is then applied to the outputs of the IPSL-CM4 model over stabilized periods of the pre-industrial, 2 x CO{sub 2} and 4 x CO{sub 2} IPCC climate scenarios. The results indicate that surface along-shore winds off central Chile (off central Peru) experience a significant intensification (weakening) during Austral winter (summer) in warmer climates. This is associated with a general decrease in intra-seasonal variability. (orig.)

  11. Octopus vulgaris paralarvae vertical distribution in a fluctuating upwelling-downwelling system

    Directory of Open Access Journals (Sweden)

    Lorena Olmos Pérez

    2014-06-01

    - Upwelling situation: superficial waters (0-20m enter through the northern mouth of the Ría and are washed through the southern mouth. This water movement promotes the entrance of cold, bottom upwelled water through the southern mouth of the Ría. Under this scenario, Octopus paralarvae are concentrated at the surface (10-0m, thus leaving the Ría. This difference is bigger after strong upwelling during the previous days. Abundances inside the Ría are the highest, maybe because it acts as a temporal retention area, or because cold upwelled waters might stimulate hatching inside the Ría. Day/night changes under strong upwelling conditions: paralarvae abundance in both mouths was quite similar, except that during the day they were in sub-surficial waters (10-5 m, while at night paralarvae were mainly found close to the surface (0-5 m. This vertical distribution during the day is remarkable because paralarvae may select offward surface waters.

  12. Structure and Mechanism of Receptoe Sharing by the IL-10R2 Common Chain

    Energy Technology Data Exchange (ETDEWEB)

    Yoon, Sung-il; Jones, Brandi C.; Logsdon, Naomi J.; Harris, Bethany D.; Deshpande, Ashlesha; Radaeva, Svetlana; Halloran, Brian A.; Gao, Bin; Walter, Mark R. (NIH); (UAB)

    2010-06-14

    IL-10R2 is a shared cell surface receptor required for the activation of five class 2 cytokines (IL-10, IL-22, IL-26, IL-28, and IL-29) that play critical roles in host defense. To define the molecular mechanisms that regulate its promiscuous binding, we have determined the crystal structure of the IL-10R2 ectodomain at 2.14 {angstrom} resolution. IL-10R2 residues required for binding were identified by alanine scanning and used to derive computational models of IL-10/IL-10R1/IL-10R2 and IL-22/IL-22R1/IL-10R2 ternary complexes. The models reveal a conserved binding epitope that is surrounded by two clefts that accommodate the structural and chemical diversity of the cytokines. These results provide a structural framework for interpreting IL-10R2 single nucleotide polymorphisms associated with human disease.

  13. Structure and Mechanism of Receptor Sharing by the IL-10R2 Common Chain

    Energy Technology Data Exchange (ETDEWEB)

    Yoon, Sung-il; Jones, Brandi C.; Logsdon, Naomi J.; Harris, Bethany D.; Deshpande, Ashlesha; Radaeva, Svetlana; Halloran, Brian A.; Gao, Bin; Walter, Mark R. (NIH); (UAB)

    2010-07-19

    IL-10R2 is a shared cell surface receptor required for the activation of five class 2 cytokines (IL-10, IL-22, IL-26, IL-28, and IL-29) that play critical roles in host defense. To define the molecular mechanisms that regulate its promiscuous binding, we have determined the crystal structure of the IL-10R2 ectodomain at 2.14 {angstrom} resolution. IL-10R2 residues required for binding were identified by alanine scanning and used to derive computational models of IL-10/IL-10R1/IL-10R2 and IL-22/IL-22R1/IL-10R2 ternary complexes. The models reveal a conserved binding epitope that is surrounded by two clefts that accommodate the structural and chemical diversity of the cytokines. These results provide a structural framework for interpreting IL-10R2 single nucleotide polymorphisms associated with human disease.

  14. Preferential occupancy of R2 retroelements on the B chromosomes of the grasshopper Eyprepocnemis plorans.

    Directory of Open Access Journals (Sweden)

    Eugenia E Montiel

    Full Text Available R2 non-LTR retrotransposons exclusively insert into the 28S rRNA genes of their host, and are expressed by co-transcription with the rDNA unit. The grasshopper Eyprepocnemis plorans contains transcribed rDNA clusters on most of its A chromosomes, as well as non-transcribed rDNA clusters on the parasitic B chromosomes found in many populations. Here the structure of the E. plorans R2 element, its abundance relative to the number of rDNA units and its retrotransposition activity were determined. Animals screened from five populations contained on average over 12,000 rDNA units on their A chromosomes, but surprisingly only about 100 R2 elements. Monitoring the patterns of R2 insertions in individuals from these populations revealed only low levels of retrotransposition. The low rates of R2 insertion observed in E. plorans differ from the high levels of R2 insertion previously observed in insect species that have many fewer rDNA units. It is proposed that high levels of R2 are strongly selected against in E. plorans, because the rDNA transcription machinery in this species is unable to differentiate between R2-inserted and uninserted units. The B chromosomes of E. plorans contain an additional 7,000 to 15,000 rDNA units, but in contrast to the A chromosomes, from 150 to over 1,500 R2 elements. The higher concentration of R2 in the inactive B chromosomes rDNA clusters suggests these chromosomes can act as a sink for R2 insertions thus further reducing the level of insertions on the A chromosomes. These studies suggest an interesting evolutionary relationship between the parasitic B chromosomes and R2 elements.

  15. The Implementation of C-ID, R2D2 Model on Learning Reading Comprehension

    Science.gov (United States)

    Rayanto, Yudi Hari; Rusmawan, Putu Ngurah

    2016-01-01

    The purposes of this research are to find out, (1) whether C-ID, R2D2 model is effective to be implemented on learning Reading comprehension, (2) college students' activity during the implementation of C-ID, R2D2 model on learning Reading comprehension, and 3) college students' learning achievement during the implementation of C-ID, R2D2 model on…

  16. R2*-relaxometry of the pancreas in patients with human hemochromatosis protein associated hereditary hemochromatosis.

    Science.gov (United States)

    Henninger, B; Rauch, S; Zoller, H; Plaikner, M; Jaschke, W; Kremser, C

    2017-04-01

    To evaluate pancreatic iron in patients with human hemochromatosis protein associated hereditary hemochromatosis (HHC) using R2* relaxometry. 81 patients (58 male, 23 female; median age 49.5, range 10-81 years) with HHC were retrospectively studied. All underwent 1.5T magnetic resonance imaging (MRI) of the abdomen. A fat-saturated multi-gradient echo sequence with 12 echoes (TR=200ms; TE-initial 0.99ms; Delta-TE 1.41ms; 12 echoes; flip-angle: 20°) was used for the R2* quantification of the liver and the pancreas. Parameter maps were analyzed using regions of interest (3 in the liver and 2 in the pancreas) and R2* values were correlated. 59/81 patients had a liver R2*≥70 1/s of which 10/59 patients had a pancreas R2*≥50 1/s. No patient presented with a liver R2*pancreas R2*≥50 1/s. All patients with pancreas R2* values≥50 1/s had liver R2* values≥70 1/s. ROC analysis resulted in a threshold of 209.4 1/s for liver R2* values to identify HFE positive patients with pancreas R2* values≥50 1/s with a median specificity of 78.87% and a median sensitivity of 90%. In patients with HHC R2* relaxometry of the pancreas should be performed when liver iron overload is present and can be omitted in cases with no sign of hepatic iron. Copyright © 2017 Elsevier B.V. All rights reserved.

  17. Lagrangian Timescales of Southern Ocean Upwelling in a Hierarchy of Model Resolutions

    Science.gov (United States)

    Drake, Henri F.; Morrison, Adele K.; Griffies, Stephen M.; Sarmiento, Jorge L.; Weijer, Wilbert; Gray, Alison R.

    2018-01-01

    In this paper we study upwelling pathways and timescales of Circumpolar Deep Water (CDW) in a hierarchy of models using a Lagrangian particle tracking method. Lagrangian timescales of CDW upwelling decrease from 87 years to 31 years to 17 years as the ocean resolution is refined from 1° to 0.25° to 0.1°. We attribute some of the differences in timescale to the strength of the eddy fields, as demonstrated by temporally degrading high-resolution model velocity fields. Consistent with the timescale dependence, we find that an average Lagrangian particle completes 3.2 circumpolar loops in the 1° model in comparison to 0.9 loops in the 0.1° model. These differences suggest that advective timescales and thus interbasin merging of upwelling CDW may be overestimated by coarse-resolution models, potentially affecting the skill of centennial scale climate change projections.

  18. Upwelling regime off the Cabo Frio region in Brazil and impact on acoustic propagation.

    Science.gov (United States)

    Calado, Leandro; Camargo Rodríguez, Orlando; Codato, Gabriel; Contrera Xavier, Fabio

    2018-03-01

    This work introduces a description of the complex upwelling regime off the Cabo Frio region in Brazil and shows that ocean modeling, based on the feature-oriented regional modeling system (FORMS) technique, can produce reliable predictions of sound speed fields for the corresponding shallow water environment. This work also shows, through the development of simulations, that the upwelling regime can be responsible for the creation of shadow coastal zones, in which the detection probability is too low for an acoustic source to be detected. The development of the FORMS technique and its validation with real data, for the particular region of coastal upwelling off Cabo Frio, reveals the possibility of a sustainable and reliable forecast system for the corresponding (variable in space and time) underwater acoustic environment.

  19. MCSA Windows Server 2012 R2 installation and configuration study guide exam 70-410

    CERN Document Server

    Panek, William

    2015-01-01

    Master Windows Server installation and configuration withhands-on practice and interactive study aids for the MCSA: WindowsServer 2012 R2 exam 70-410 MCSA: Windows Server 2012 R2 Installation and ConfigurationStudy Guide: Exam 70-410 provides complete preparationfor exam 70-410: Installing and Configuring Windows Server 2012 R2.With comprehensive coverage of all exam topics and plenty ofhands-on practice, this self-paced guide is the ideal resource forthose preparing for the MCSA on Windows Server 2012 R2. Real-worldscenarios demonstrate how the lessons are applied in everydaysettings. Reader

  20. R2P in the UN Security Council: Darfur, Libya and beyond

    OpenAIRE

    Gifkins, J

    2016-01-01

    It has been argued that consensus on the responsibility to protect (R2P) was lost in the UN Security Council as a result of the NATO-led intervention in Libya in 2011. This argument assumes that there was more agreement on R2P before the Libyan intervention than there was afterwards. Yet a close examination of the Security Council’s use of language on R2P shows the opposite: R2P was highly contentious within the Security Council prior to the Libyan intervention, and less so afterwards. Not on...

  1. Gradients in microbial methanol uptake: productive coastal upwelling waters to oligotrophic gyres in the Atlantic Ocean

    Science.gov (United States)

    Dixon, Joanna L; Sargeant, Stephanie; Nightingale, Philip D; Colin Murrell, J

    2013-01-01

    Methanol biogeochemistry and its importance as a carbon source in seawater is relatively unexplored. We report the first microbial methanol carbon assimilation rates (k) in productive coastal upwelling waters of up to 0.117±0.002 d−1 (∼10 nmol l−1 d−1). On average, coastal upwelling waters were 11 times greater than open ocean northern temperate (NT) waters, eight times greater than gyre waters and four times greater than equatorial upwelling (EU) waters; suggesting that all upwelling waters upon reaching the surface (⩽20 m), contain a microbial population that uses a relatively high amount of carbon (0.3–10 nmol l−1 d−1), derived from methanol, to support their growth. In open ocean Atlantic regions, microbial uptake of methanol into biomass was significantly lower, ranging between 0.04–0.68 nmol l−1 d−1. Microbes in the Mauritanian coastal upwelling used up to 57% of the total methanol for assimilation of the carbon into cells, compared with an average of 12% in the EU, and 1% in NT and gyre waters. Several methylotrophic bacterial species were identified from open ocean Atlantic waters using PCR amplification of mxaF encoding methanol dehydrogenase, the key enzyme in bacterial methanol oxidation. These included Methylophaga sp., Burkholderiales sp., Methylococcaceae sp., Ancylobacter aquaticus, Paracoccus denitrificans, Methylophilus methylotrophus, Methylobacterium oryzae, Hyphomicrobium sp. and Methylosulfonomonas methylovora. Statistically significant correlations for upwelling waters between methanol uptake into cells and both chlorophyll a concentrations and methanol oxidation rates suggest that remotely sensed chlorophyll a images, in these productive areas, could be used to derive total methanol biological loss rates, a useful tool for atmospheric and marine climatically active gas modellers, and air–sea exchange scientists. PMID:23178665

  2. The role of Southern Ocean mixing and upwelling in glacial-interglacial atmospheric CO2 change

    International Nuclear Information System (INIS)

    Watson, Andrew J.; Naveira Garabato, Alberto C.

    2006-01-01

    Decreased ventilation of the Southern Ocean in glacial time is implicated in most explanations of lower glacial atmospheric CO 2 . Today, the deep (>2000 m) ocean south of the Polar Front is rapidly ventilated from below, with the interaction of deep currents with topography driving high mixing rates well up into the water column. We show from a buoyancy budget that mixing rates are high in all the deep waters of the Southern Ocean. Between the surface and 2000 m depth, water is upwelled by a residual meridional overturning that is directly linked to buoyancy fluxes through the ocean surface. Combined with the rapid deep mixing, this upwelling serves to return deep water to the surface on a short time scale. We propose two new mechanisms by which, in glacial time, the deep Southern Ocean may have been more isolated from the surface. Firstly, the deep ocean appears to have been more stratified because of denser bottom water resulting from intense sea ice formation near Antarctica. The greater stratification would have slowed the deep mixing. Secondly, subzero atmospheric temperatures may have meant that the present-day buoyancy flux from the atmosphere to the ocean surface was reduced or reversed. This in turn would have reduced or eliminated the upwelling (contrary to a common assumption, upwelling is not solely a function of the wind stress but is coupled to the air/sea buoyancy flux too). The observed very close link between Antarctic temperatures and atmospheric CO 2 could then be explained as a natural consequence of the connection between the air/sea buoyancy flux and upwelling in the Southern Ocean, if slower ventilation of the Southern Ocean led to lower atmospheric CO 2 . Here we use a box model, similar to those of previous authors, to show that weaker mixing and reduced upwelling in the Southern Ocean can explain the low glacial atmospheric CO 2 in such a formulation

  3. The use of circulation weather types to predict upwelling activity along the Western Iberian Peninsula coast

    Science.gov (United States)

    Ramos, Alexandre M.; Cordeiro Pires, Ana; Sousa, Pedro M.; Trigo, Ricardo M.

    2013-04-01

    Coastal upwelling is a phenomenon that occurs in most western oceanic coasts due to the presence of mid-latitude high-pressure systems that generate equatorward winds along the coast and consequent offshore displacement of surface waters that in turn cause deeper, colder, nutrient-rich waters to arise. In western Iberian Peninsula (IP) the high-pressure system associated to northerly winds occurs mainly during spring and summer. Upwelling systems are economically relevant, being the most productive regions of the world ocean and crucial for fisheries. In this work, we evaluate the intra- and inter-annual variability of the Upwelling Index (UI) off the western coast of the IP considering four locations at various latitudes: Rias Baixas, Aveiro, Figueira da Foz and Cabo da Roca. In addition, the relationship between the variability of the occurrence of several circulation weather types (Ramos et al., 2011) and the UI variability along this coast was assessed in detail, allowing to discriminate which types are frequently associated with strong and weak upwelling activity. It is shown that upwelling activity is mostly driven by wind flow from the northern quadrant, for which the obtained correlation coefficients (for the N and NE types) are higher than 0.5 for the four considered test locations. Taking into account these significant relationships, we then developed statistical multi-linear regression models to hindcast upwelling series (April to September) at the four referred locations, using monthly frequencies of circulation weather types as predictors. Modelled monthly series reproduce quite accurately observational data, with correlation coefficients above 0.7 for all locations, and relatively small absolute errors. Ramos AM, Ramos R, Sousa P, Trigo RM, Janeira M, Prior V (2011) Cloud to ground lightning activity over Portugal and its association with Circulation Weather Types. Atmospheric Research 101:84-101. doi: 10.1016/j.atmosres.2011.01

  4. An Altimetry-Derived Index of the Offshore Forcing on the "Pressure Point" of the West Florida Shelf: Anomalous Upwelling and Its Influence on Harmful Algal Blooms

    Science.gov (United States)

    Liu, Y.; Weisberg, R. H.; Lenes, J. M.; Zheng, L.; Hubbard, K.; Walsh, J. J.

    2017-12-01

    Gulf of Mexico Loop Current (LC) interactions with the West Florida Shelf (WFS) slope play an important role in shelf ecology through the upwelling of new inorganic nutrients across the shelf break. This is particularly the case when the LC impinges upon the shelf slope in the southwest portion of the WFS near the Dry Tortugas. By contacting shallow water isobaths at this "pressure point" the LC forcing sets the entire shelf into motion. Characteristic patterns of LC interactions with the WFS and their occurrences are identified from altimetry data using unsupervised neural network, self-organizing map. The duration of the occurrences of such LC patterns is used as an indicator of offshore forcing of anomalous upwelling. Consistency is found between the altimetry-derived offshore forcing and the occurrence and severity of WFS coastal blooms of the toxic dinoflagellate, Karenia brevis: years without major blooms tend to have prolonged LC contact at the "pressure point," whereas years with major blooms tend not to have prolonged offshore forcing. Resetting the nutrient state of the shelf by the coastal ocean circulation in response to deep-ocean forcing demonstrates the importance of physical oceanography in shelf ecology. A satellite altimetry-derived seasonal predictor for major K. brevis blooms is also proposed.

  5. A Fortran-77 program for Monte Carlo simulation of upwelling light from the sea

    Digital Repository Service at National Institute of Oceanography (India)

    Sathe, P.V.; Sathyendranath, S.

    for Monte Carlo simulation of spectral and angular composition of upwelling light emerging from a wind-roughened sea under given physical conditions and for a given water quality. The program also simulates the light field prevailing immediately below... constituents of the sea which influence the quality of upwelling light. Because the program is a direct simulation of radiative transfer from the atmosphere to the sea and vice versa, it may be put to a variety of uses in studies in marine optics. Simulated...

  6. Evaluation of ERTS data for certain oceanographic uses. [upwelling, water circulation, and pollution in Great Lakes

    Science.gov (United States)

    Strong, A. E. (Principal Investigator)

    1973-01-01

    The author has identified the following significant results. Upwelling along the eastern shore of Lake Michigan was occurring during the 3 and 21 August 1973 visits by ERTS-1. The NOAA-2 VHRR thermal-IR data are being digitized for comparison. Early indications are that these upwellings induced a calcium carbonate precipitate to form in the surface waters. It is most pronounced in the MSS-4 channel. On the lake bottom this jell-like sediment is known as marl and adds to the eutrophication of the lake. This phenomenon may help to explain the varve-like nature of bottom cores that have been observed in the Great Lakes.

  7. γ-Aminobutyric Acid Type B (GABAB) Receptor Internalization Is Regulated by the R2 Subunit*

    Science.gov (United States)

    Hannan, Saad; Wilkins, Megan E.; Dehghani-Tafti, Ebrahim; Thomas, Philip; Baddeley, Stuart M.; Smart, Trevor G.

    2011-01-01

    γ-Aminobutyric acid type B (GABAB) receptors are important for slow synaptic inhibition in the CNS. The efficacy of inhibition is directly related to the stability of cell surface receptors. For GABAB receptors, heterodimerization between R1 and R2 subunits is critical for cell surface expression and signaling, but how this determines the rate and extent of receptor internalization is unknown. Here, we insert a high affinity α-bungarotoxin binding site into the N terminus of the R2 subunit and reveal its dominant role in regulating the internalization of GABAB receptors in live cells. To simultaneously study R1a and R2 trafficking, a new α-bungarotoxin binding site-labeling technique was used, allowing α-bungarotoxin conjugated to different fluorophores to selectively label R1a and R2 subunits. This approach demonstrated that R1a and R2 are internalized as dimers. In heterologous expression systems and neurons, the rates and extents of internalization for R1aR2 heteromers and R2 homomers are similar, suggesting a regulatory role for R2 in determining cell surface receptor stability. The fast internalization rate of R1a, which has been engineered to exit the endoplasmic reticulum, was slowed to that of R2 by truncating the R1a C-terminal tail or by removing a dileucine motif in its coiled-coil domain. Slowing the rate of internalization by co-assembly with R2 represents a novel role for GPCR heterodimerization whereby R2 subunits, via their C terminus coiled-coil domain, mask a dileucine motif on R1a subunits to determine the surface stability of the GABAB receptor. PMID:21724853

  8. Building a SuAVE browse interface to R2R's Linked Data

    Science.gov (United States)

    Clark, D.; Stocks, K. I.; Arko, R. A.; Zaslavsky, I.; Whitenack, T.

    2017-12-01

    The Rolling Deck to Repository program (R2R) is creating and evaluating a new browse portal based on the SuAVE platform and the R2R linked data graph. R2R manages the underway sensor data collected by the fleet of US academic research vessels, and provides a discovery and access point to those data at its website, www.rvdata.us. R2R has a database-driven search interface, but seeks a more capable and extensible browse interface that could be built off of the substantial R2R linked data resources. R2R's Linked Data graph organizes its data holdings around key concepts (e.g. cruise, vessel, device type, operator, award, organization, publication), anchored by persistent identifiers where feasible. The "Survey Analysis via Visual Exploration" or SuAVE platform (suave.sdsc.edu) is a system for online publication, sharing, and analysis of images and metadata. It has been implemented as an interface to diverse data collections, but has not been driven off of linked data in the past. SuAVE supports several features of interest to R2R, including faceted searching, collaborative annotations, efficient subsetting, Google maps-like navigation over an image gallery, and several types of data analysis. Our initial SuAVE-based implementation was through a CSV export from the R2R PostGIS-enabled PostgreSQL database. This served to demonstrate the utility of SuAVE but was static and required reloading as R2R data holdings grew. We are now working to implement a SPARQL-based ("RDF Query Language") service that directly leverages the R2R Linked Data graph and offers the ability to subset and/or customize output.We will show examples of SuAVE faceted searches on R2R linked data concepts, and discuss our experience to date with this work in progress.

  9. Development of upwelling on pathway and freshwater transport of Pearl River plume in northeastern South China Sea

    Science.gov (United States)

    Chen, Zhaoyun; Jiang, Yuwu; Liu, James T.; Gong, Wenping

    2017-08-01

    In situ observations, satellite images, and numerical modeling results have shown that the Pearl River plume axis extends alongshore and passes through two separate upwelling regions—one off the Guangdong and Fujian coasts (the Yuedong upwelling) and the other in the Taiwan Bank during the initial and medium stages of the Yuedong upwelling, while it is directed offshore when the Yuedong upwelling is strong. Model experiments are conducted to examine the effects of wind strength and baroclinicity on the upwelling and the corresponding pathway and freshwater transport of the Pearl River plume. The baroclinic effect is important to intensifying the horizontal velocity at the upwelling front and freshwater transport in the northeastern South China Sea. The freshwater transport flux is further decomposed into advection, vertical shear, and tidal pumping components, and advection is the dominant contributor. As the Yuedong upwelling develops, the zone with a relatively high-pressure gradient moves offshore due to offshore Ekman transport and the shift in the upwelling front, which is responsible for the offshore transport of the river plume. When the river plume is transported to the outer-shelf, sometimes it can be further entrained into eddies, allowing its export to the open sea.

  10. Latitudinal variation in the reproductive cycle of two bivalves with contrasting biogeographical origin along the Humboldt Current Upwelling Ecosystem

    Directory of Open Access Journals (Sweden)

    Roberto A. Uribe

    2012-10-01

    Full Text Available Argopecten purpuratus (Lamarck, 1819 and Mesodesma donacium (Lamarck, 1818 are bivalves that inhabit the Humboldt Current Upwelling Ecosystem. They have contrasting biogeographical origins, suggesting that their responses to exogenous factors should differ. Using circular statistics, we examine synchrony/asynchrony in the reproductive cycle between populations of each species. The results indicate that there is reproductive asynchrony in both species along their distributional range. However, there was synchrony for A. purpuratus in several location-pairs, including Paita-Chimbote, Chimbote-Callao, Callao-Pisco and Pisco-Antofagasta. For M. donacium, there were only two synchronic groups: Camaná-Capellanía-Mehuín and Hornitos-Peñuelas-Longotoma-La Ligua-Cucao-Quilanlar. A. purpuratus showed gametogenenic activity throughout the year. In contrast, M. donacium showed strong seasonality, with gametogenesis in winter and spawning in spring/summer. In conclusion, the patterns observed for these sympatric species suggest that on a large scale the reproductive cycles follow the expected patterns for the contrasting biogeographic origin of each species, so it could be argued that they are modulated by endogenous factors. However, at a local scale, the reproductive cycles of these species show variation, likely determined by local oceanographic or hydrographic processes.

  11. The influence of molecular order and microstructure on the R2* and the magnetic susceptibility tensor.

    Science.gov (United States)

    Wisnieff, Cynthia; Liu, Tian; Wang, Yi; Spincemaille, Pascal

    2016-06-01

    In this work, we demonstrate that in the presence of ordered sub-voxel structure such as tubular organization, biomaterials with molecular isotropy exhibits only apparent R2* anisotropy, while biomaterials with molecular anisotropy exhibit both apparent R2* and susceptibility anisotropy by means of susceptibility tensor imaging (STI). To this end, R2* and STI from gradient echo magnitude and phase data were examined in phantoms made from carbon fiber and Gadolinium (Gd) solutions with and without intrinsic molecular order and sub-voxel structure as well as in the in vivo brain. Confidence in the tensor reconstructions was evaluated with a wild bootstrap analysis. Carbon fiber showed both apparent anisotropy in R2* and anisotropy in STI, while the Gd filled capillary tubes only showed apparent anisotropy on R2*. Similarly, white matter showed anisotropic R2* and magnetic susceptibility with higher confidence, while the cerebral veins displayed only strong apparent R2* tensor anisotropy. Ordered sub-voxel tissue microstructure leads to apparent R2* anisotropy, which can be found in both white matter tracts and cerebral veins. However, additional molecular anisotropy is required for magnetic susceptibility anisotropy, which can be found in white matter tracts but not in cerebral veins. Copyright © 2016 Elsevier Inc. All rights reserved.

  12. High nigral iron deposition in LRRK2 and Parkin mutation carriers using R2* relaxometry

    DEFF Research Database (Denmark)

    Pyatigorskaya, Nadya; Sharman, Michael; Corvol, Jean-Christophe

    2015-01-01

    symptomatic and two asymptomatic Parkin subjects, nine symptomatic and five asymptomatic LRRK2 subjects) were compared with 20 patients with idiopathic PD (IPD) and 20 healthy subjects. Images were obtained at 3 teslas, using multi-echo T2 and T2* sequences. R2 and R2* values were calculated in the substantia...

  13. Seasonal cooling and blooming in tropical oceans

    Science.gov (United States)

    Longhurst, Alan

    1993-11-01

    The relative importance of tropical pelagic algal blooms in not yet fully appreciated and the way they are induced not well understood. The tropical Atlantic supports pelagic blooms together equivalent to the North Atlantic spring bloom. These blooms are driven by thermocline tilting, curl of wind stress and eddy upwelling as the ocean responds to intensified basin-scale winds in boreal summer. The dimensions of the Pacific Ocean are such that seasonal thermocline tilting does not occur, and nutrient conditions are such that tilting might not induce bloom, in any case. Divergence at the equator is a separate process that strengthens the Atlantic bloom, is more prominent in the eastern Pacific, and in the Indian Ocean induces a bloom only in the western part of the ocean. Where western jet currents are retroflected from the coast off Somalia and Brazil, eddy upwelling induces prominent blooms. In the eastward flow of the northern equatorial countercurrents, positive wind curl stress induces Ekman pumping and the induction of algal blooms aligned with the currents. Some apparent algal bloom, such as that seen frequently in CZCS images westwards from Senegal, must be due to interference from airborne dust.

  14. R2U2: Monitoring and Diagnosis of Security Threats for Unmanned Aerial Systems

    Science.gov (United States)

    Schumann, Johann; Moosbruger, Patrick; Rozier, Kristin Y.

    2015-01-01

    We present R2U2, a novel framework for runtime monitoring of security properties and diagnosing of security threats on-board Unmanned Aerial Systems (UAS). R2U2, implemented in FPGA hardware, is a real-time, REALIZABLE, RESPONSIVE, UNOBTRUSIVE Unit for security threat detection. R2U2 is designed to continuously monitor inputs from the GPS and the ground control station, sensor readings, actuator outputs, and flight software status. By simultaneously monitoring and performing statistical reasoning, attack patterns and post-attack discrepancies in the UAS behavior can be detected. R2U2 uses runtime observer pairs for linear and metric temporal logics for property monitoring and Bayesian networks for diagnosis of security threats. We discuss the design and implementation that now enables R2U2 to handle security threats and present simulation results of several attack scenarios on the NASA DragonEye UAS.

  15. An upwelling filament North-West of Cape Town, South Africa ...

    African Journals Online (AJOL)

    One is the sporadic advection of warm water from the Agulhas Bank onto the southern shelf. The cruise took place following such an event. The anticipated shelf-edge jet was greatly diminished and forced inshore. The possible effect of barotropic shelf waves on the configuration of the upwelling tongue and the formation of ...

  16. On the warm nearshore bias in Pathfinder monthly SST products over Eastern Boundary upwelling systems

    CSIR Research Space (South Africa)

    Dufois, F

    2012-01-01

    Full Text Available Using in situ sea surface temperature (SST) data and MODIS/TERRA SST, the monthly AVHRR Pathfinder (version 5.0 and 5.2) SST product was evaluated within the four main Eastern Boundary Upwelling Systems. A warm bias in the monthly Pathfinder data...

  17. Environmental changes associated with monsoon induced upwelling, off central west coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    DeSousa, S.N.; Sawkar, K.; Rao, P.V.S.S.D.P.

    in response to prevailing equatorward winds. High salinity ocean waters of rich nutrient contents were observed at the coast in some locations. However, the effect of upwelling on the surface distribution of properties was reduced to some extent due to coastal...

  18. Why coastal upwelling is expected to increase along the western Iberian Peninsula over the next century?

    Science.gov (United States)

    Sousa, Magda Catarina; deCastro, Maite; Alvarez, Ines; Gomez-Gesteira, Moncho; Dias, João Miguel

    2017-08-15

    Former studies about coastal upwelling along the Western Iberian Peninsula (WIP) using historical data indicated contradictory results, showing either its strengthening or reduction, while previous studies using Global Climate Models (GCMs) indicated that global warming is likely to intensify this phenomenon although predicting different rates and not justifying the patterns found. Taking advantage of the recent high spatial resolution Regional Climate Models (RCMs) projections from EURO-CORDEX project (Representative Concentration Pathway, RCP 8.5), detailed higher accuracy estimations of the spatio-temporal trends of Upwelling Index (UI) along the WIP coast were performed in this study, integrating the coastal mesoscale effects within the framework of climate change. Additionally, this research brings new insights about the origin of the WIP coastal upwelling intensification over the next century. These new projections clarified the upwelling strengthening rates predicted along the coast of the WIP from 2006 to 2099 revealing more prominent changes in the northern limit of the region (25-30m 3 s -1 km -1 per decade between 41.5 and 42.5°N). Trends observed at high latitudes of the region were found to be induced by the displacement of the Azores High, which will intensify (0.03hPa per decade) and drift northeastward (10km per decade) during the 21st century. Copyright © 2017 Elsevier B.V. All rights reserved.

  19. Spatial distribution of upwelling off the central east coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    Rao, T.V.N.

    of the data collected along the five sections. At all the sections, a decrease in water temperature and an increase in salinity from the offshore stations to the stations closest to the shore indicated coastal upwelling. The Rossby radii of deformation...

  20. Insights into the Microbial and Viral Dynamics of a Coastal Downwelling-Upwelling Transition.

    Directory of Open Access Journals (Sweden)

    Gustavo Bueno Gregoracci

    Full Text Available Although previous studies have described opposing states in upwelling regions, i.e., the rise of cold nutrient-rich waters and prevalence of surface warm nutrient-poor waters, few have addressed the transition from one state to the other. This study aimed to describe the microbial and viral structure during this transition and was able to obtain the taxonomic and metabolic compositions as well as physical-chemical data. This integrated approach allowed for a better understanding of the dynamics of the downwelling upwelling transition, suggesting that a wealth of metabolic processes and ecological interactions are occurring in the minute fractions of the plankton (femto, pico, nano. These processes and interactions included evidence of microbial predominance during downwelling (with nitrogen recycling and aerobic anoxygenic photosynthesis, different viral predation pressures over primary production in different states (cyanobacteria vs eukaryotes, and a predominance of diatoms and selected bacterial and archaeal groups during upwelling (with the occurrence of a wealth of nitrogen metabolism involving ammonia. Thus, the results provided insights into which microbes, viruses and microbial-mediated processes are probably important in the functioning of upwelling systems.

  1. Internal structure of the upwelling events at Punta Gallinas (Colombian Caribbean) from modis-sst imagery

    Science.gov (United States)

    Alonso, J.; Blázquez, E.; Isaza-Toro, E.; Vidal, J.

    2015-10-01

    The upwelling at Punta Gallinas in the Guajira Peninsula (Colombian Caribbean) was studied from the point of view of the Mathematical Morphology using 10 years of monthly composite MODIS-SST imagery. Among all the morphological operators, the skeleton is widely used to compute the axis of the of the SST fields for the observed upwelling events. The skeleton is characterized by means of the Geometrical Theory of Measurement using the fractal dimension. The upwelling in the area is driven by the dynamic of the ITCZ (InterTropical Convergence Zone) and the relationship between the area and the East-West component of the trade winds has a lag of about 4 months. It has been found that the fractal dimension of the skeleton and the area of the upwelling are related. Some relationship was found between the fractal dimension of the skeleton (its complexity) and the Southern Oscillation Index by means of linear regression and cross-spectral analysis finding coherent energy at 1 year, 6 months and in the low frequency band. Finally, a sensitivity analysis between fractal dimension and threshold SST points out to take an extreme care at the time of fixing the last one.

  2. The physical structure of an upwelling filament off the North-west ...

    African Journals Online (AJOL)

    ... in dispersal of material originating in the region of active coastal upwelling. The location of the filament studied appears repeatable from year to year, suggestive of a strong relation with the topographically trapped eddy, which was situated downstream of a lateral ridge between the. Canary Islands and the African coast.

  3. Arabian Sea upwelling - A comparison between coastal and open ocean regions

    Digital Repository Service at National Institute of Oceanography (India)

    Muraleedharan, P.M.; PrasannaKumar, S.

    The response of the eastern Arabian Sea to prevailing winds during an upwelling event, in the peak of southwest monsoon, was studied at both coastal and open ocean environment based on the data collected as a part of the Indian Joint Global Ocean...

  4. Sources of new nitrogen in the Vietnamese upwelling region of the South China Sea

    DEFF Research Database (Denmark)

    Bombar, Deniz; Dippner, Joachim W.; Doan, Hai Nhu

    2010-01-01

    In the South China Sea, the southwest monsoon between June and September induces upwelling off the southern central Vietnamese coast. During field campaigns in July 2003 and 2004 we evaluated the importance of nitrate and nitrogen fixation as sources of new nitrogen for phytoplankton primary...

  5. Microbial and biogeochemical responses to projected future nitrate enrichment in the California upwelling system

    Directory of Open Access Journals (Sweden)

    Katherine Rose Marie Mackey

    2014-11-01

    Full Text Available Coastal California is a dynamic upwelling region where nitrogen (N and iron (Fe can both limit productivity and influence biogeochemistry over different spatial and temporal scales. With global change, the flux of nitrate from upwelling is expected to increase over the next century, potentially driving additional oceanic regions toward Fe limitation. In this study we explored the effect of changes in Fe/N ratio on native phytoplankton from five currently Fe-replete sites near the major California upwelling centers at Bodega Bay and Monterey Bay using nutrient addition incubation experiments. Despite the high nitrate levels (13-30 M in the upwelled water, phytoplankton at three of the five sites showed increased growth when 10 M nitrate was added. None of the sites showed enhanced growth following addition of 10 nM Fe. Nitrate additions favored slow sinking single-celled diatoms over faster sinking chain-forming diatoms, suggesting that future increases in nitrate flux could affect carbon and silicate export and alter grazer populations. In particular, solitary cells of Cylindrotheca were more abundant than the toxin-producing genus Pseudonitzschia following nitrate addition. These responses suggest the biogeochemistry of coastal California could change in response to future increases in nitrate, and multiple stressors like ocean acidification and hypoxia may further result in ecosystem shifts.

  6. Retrospective comparison of gradient recalled echo R2* and spin-echo R2 magnetic resonance analysis methods for estimating liver iron content in children and adolescents

    Energy Technology Data Exchange (ETDEWEB)

    Serai, Suraj D.; Fleck, Robert J. [Cincinnati Children' s Hospital Medical Center, Department of Radiology, MLC 5031, Cincinnati, OH (United States); Quinn, Charles T. [Cincinnati Children' s Hospital Medical Center, Division of Hematology, Cincinnati, OH (United States); Zhang, Bin [Cincinnati Children' s Hospital Medical Center, Division of Biostatistics and Epidemiology, Cincinnati, OH (United States); Podberesky, Daniel J. [Nemours Children' s Health System Nemours Children' s Hospital, Department of Radiology, Orlando, FL (United States)

    2015-10-15

    Serial surveillance of liver iron concentration (LIC) provides guidance for chelation therapy in patients with iron overload. The diagnosis of iron overload traditionally relies on core liver biopsy, which is limited by invasiveness, sampling error, cost and general poor acceptance by pediatric patients and parents. Thus noninvasive diagnostic methods such as MRI are highly attractive for quantification of liver iron concentration. To compare two MRI-based methods for liver iron quantification in children. 64 studies on 48 children and young adults (age range 4-21 years) were examined by gradient recalled echo (GRE) R2* and spin-echo R2 MRI at 1.5T to evaluate liver iron concentration. Scatter plots and Bland-Altman difference plots were generated to display and assess the relationship between the methods. With the protocols used in this investigation, Bland-Altman agreement between the methods is best when LIC is <20 mg/g dry tissue. Scatter plots show that all values with LIC <20 mg/g dry tissue fall within the 95% prediction limits. Liver iron concentration as determined by the R2* and R2 MR methods is statistically comparable, with no statistical difference between these methods for LIC <20 mg/g. (orig.)

  7. Biogenic halocarbons from coastal oceanic upwelling regions as tropospheric halogen source

    Science.gov (United States)

    Krüger, Kirstin; Fuhlbrügge, Steffen; Hepach, Helmke; Fiehn, Alina; Atlas, Elliot; Quack, Birgit

    2016-04-01

    Halogenated very short lived substances (VSLS) are naturally produced in the ocean and emitted to the atmosphere. Recently, oceanic upwelling regions in the tropical East Atlantic were identified as strong sources of brominated halocarbons to the troposphere. During a cruise of R/V METEOR in December 2012 the oceanic sources and emissions of various halogenated trace gases and their mixing ratios in the marine atmospheric boundary layer (MABL) were investigated above the Peruvian Upwelling for the first time. This study presents novel observations of the three VSLS bromoform, dibromomethane and methyl iodide together with high resolution meteorological measurements and Lagrangian transport modelling. Although relatively low oceanic emissions were observed, except for methyl iodide, surface atmospheric abundances were elevated. Radiosonde launches during the cruise revealed a low, stable MABL and a distinct trade inversion above acting both as strong barriers for convection and trace gas transport in this region. Significant correlations between observed atmospheric VSLS abundances, sea surface temperature, relative humidity and MABL height were found. We used a simple source-loss estimate to identify the contribution of oceanic emissions to observed atmospheric concentrations which revealed that the observed marine VSLS abundances were dominated by horizontal advection below the trade inversion. The observed VSLS variations can be explained by the low emissions and their accumulation under different MABL and trade inversion conditions. Finally, observations from a second Peruvian Upwelling cruise with R/V SONNE during El Nino in October 2015 will be compared to highlight the role of different El Nino Southern Oscillation conditions. This study confirms the importance of coastal oceanic upwelling and trade wind systems on creating effective transport barriers in the lowermost atmosphere controlling the distribution of VSLS abundances above coastal ocean upwelling

  8. The circulation dynamics associated with a northern Benguela upwelling filament during October 2010

    Science.gov (United States)

    Muller, Annethea A.; Mohrholz, Volker; Schmidt, Martin

    2013-07-01

    Upwelling filaments, a common feature in all the major upwelling systems, are also regularly observed in the Benguela upwelling system and are thought to provide an effective mechanism for the exchange of matter between the shelf and the open ocean. The mesoscale dynamics of a northern Benguela upwelling filament located at approximately 18.5°S were examined and the associated transport was quantified. The development of the filament was tracked using optimal interpolated SST satellite data and two transects were consequently sampled across the feature using a towed undulating CTD (ScanFish). Additional hydrographic, nutrient and biological parameters were investigated at several stations along each transect. Following 7 days of strong upwelling favorable winds, sampling coincided with a period of relative wind relaxation and the filament was presumably in a decaying state. The basic mesoscale structure of the investigated filament corresponded well to what had previously been described for filaments from other eastern boundary current systems. The cross-shore transport associated with the filament was found to be significantly greater than the integrated Ekman transport in the region. With the combination of the high resolution dataset and a MOM-4 ecosystem model the complex mesoscale flow field associated with the feature could be observed and the counterbalancing onshore transport, associated with subsurface dipole eddies, was revealed within the filament. The results further suggest that an interaction between the offshore bending of flow at the Angola-Benguela Front (ABF), the detachment of the strong poleward flow from the coast as the thermal front meanders and the observed dipole eddies may be driving filament occurrence in the region off Cape Frio.

  9. ChR2 transgenic animals in peripheral sensory system: Sensing light as various sensations.

    Science.gov (United States)

    Ji, Zhi-Gang; Wang, Hongxia

    2016-04-01

    Since the introduction of Channelrhodopsin-2 (ChR2) to neuroscience, optogenetics technology was developed, making it possible to activate specific neurons or circuits with spatial and temporal precision. Various ChR2 transgenic animal models have been generated and are playing important roles in revealing the mechanisms of neural activities, mapping neural circuits, controlling the behaviors of animals as well as exploring new strategy for treating the neurological diseases in both central and peripheral nervous system. An animal including humans senses environments through Aristotle's five senses (sight, hearing, smell, taste and touch). Usually, each sense is associated with a kind of sensory organ (eyes, ears, nose, tongue and skin). Is it possible that one could hear light, smell light, taste light and touch light? When ChR2 is targeted to different peripheral sensory neurons by viral vectors or generating ChR2 transgenic animals, the animals can sense the light as various sensations such as hearing, touch, pain, smell and taste. In this review, we focus on ChR2 transgenic animals in the peripheral nervous system. Firstly the working principle of ChR2 as an optogenetic actuator is simply described. Then the current transgenic animal lines where ChR2 was expressed in peripheral sensory neurons are presented and the findings obtained by these animal models are reviewed. Copyright © 2016 Elsevier Inc. All rights reserved.

  10. NEAR-INFRARED CIRCULAR AND LINEAR POLARIMETRY OF MONOCEROS R2

    Energy Technology Data Exchange (ETDEWEB)

    Kwon, Jungmi; Tamura, Motohide [Department of Astronomy, Graduate School of Science, The University of Tokyo, 113-0033 (Japan); Hough, James H. [University of Hertfordshire, Hatfield, Herts AL10 9AB (United Kingdom); Nagata, Tetsuya [Kyoto University, Sakyo-ku, Kyoto 606-8502 (Japan); Kusakabe, Nobuhiko [National Astronomical Observatory of Japan, 2-21-1 Osawa, Mitaka, Tokyo 181-8588 (Japan)

    2016-09-01

    We have conducted simultaneous JHK{sub s}-band imaging circular and linear polarimetry of the Monoceros R2 (Mon R2) cluster. We present results from deep and wide near-infrared linear polarimetry of the Mon R2 region. Prominent and extended polarized nebulosities over the Mon R2 field are revisited, and an infrared reflection nebula associated with the Mon R2 cluster and two local reflection nebulae, vdB 67 and vdB 69, is detected. We also present results from deep imaging circular polarimetry in the same region. For the first time, the observations show relatively high degrees of circular polarization (CP) in Mon R2, with as much as approximately 10% in the K{sub s} band. The maximum CP extent of a ring-like nebula around the Mon R2 cluster is approximately 0.60 pc, while that of a western nebula, around vdB 67, is approximately 0.24 pc. The extended size of the CP is larger than those seen in the Orion region around IRc2, while the maximum degree of CP of ∼10% is smaller than those of ∼17% seen in the Orion region. Nonetheless, both the CP size and degree of this region are among the largest in our infrared CP survey of star-forming regions. We have also investigated the time variability of the degree of the polarization of several infrared sources and found possible variations in three sources.

  11. An R2 statistic for fixed effects in the linear mixed model.

    Science.gov (United States)

    Edwards, Lloyd J; Muller, Keith E; Wolfinger, Russell D; Qaqish, Bahjat F; Schabenberger, Oliver

    2008-12-20

    Statisticians most often use the linear mixed model to analyze Gaussian longitudinal data. The value and familiarity of the R(2) statistic in the linear univariate model naturally creates great interest in extending it to the linear mixed model. We define and describe how to compute a model R(2) statistic for the linear mixed model by using only a single model. The proposed R(2) statistic measures multivariate association between the repeated outcomes and the fixed effects in the linear mixed model. The R(2) statistic arises as a 1-1 function of an appropriate F statistic for testing all fixed effects (except typically the intercept) in a full model. The statistic compares the full model with a null model with all fixed effects deleted (except typically the intercept) while retaining exactly the same covariance structure. Furthermore, the R(2) statistic leads immediately to a natural definition of a partial R(2) statistic. A mixed model in which ethnicity gives a very small p-value as a longitudinal predictor of blood pressure (BP) compellingly illustrates the value of the statistic. In sharp contrast to the extreme p-value, a very small R(2) , a measure of statistical and scientific importance, indicates that ethnicity has an almost negligible association with the repeated BP outcomes for the study.

  12. 26 CFR 31.3306(r)(2)-1 - Treatment of amounts deferred under certain nonqualified deferred compensation plans.

    Science.gov (United States)

    2010-04-01

    ... nonqualified deferred compensation plans. 31.3306(r)(2)-1 Section 31.3306(r)(2)-1 Internal Revenue INTERNAL..., Internal Revenue Code of 1954) § 31.3306(r)(2)-1 Treatment of amounts deferred under certain nonqualified deferred compensation plans. (a) In general. Section 3306(r)(2) provides a special timing rule for the tax...

  13. MCSA Windows Server 2012 R2 administration study guide exam 70-411

    CERN Document Server

    Panek, William

    2015-01-01

    Complete exam coverage, hands-on practice, and interactive studytools for the MCSA: Administering Windows Server 2012 R2 exam70-411 MCSA: Windows Server 2012 R2 Administration Study Guide: Exam70-411 provides comprehensive preparation for exam 70-411:Administering Windows Server 2012 R2. With full coverage of allexam domains, this guide contains everything you need to know to befully prepared on test day. Real-world scenarios illustrate thepractical applications of the lessons, and hands-on exercises allowyou to test yourself against everyday tasks. You get access to aninteractive practice te

  14. An ODIP effort to map R2R ocean data terms to international vocabularies

    Science.gov (United States)

    Ferreira, Renata; Stocks, Karen; Arko, Robert

    2014-05-01

    The heterogeneity of terminology used in describing data creates a barrier to the efficient discovery and re-use of data, particularly across institutional, programmatic, and disciplinary boundaries. Here we explore the outcomes of a student project to crosswalk terms between the Rolling Deck to Repository (R2R) program and other international systems, as part of the Ocean Data Interoperability Platform (ODIP). R2R is a US program developing and implementing an information management system to preserve and provide access to routine underway data collected by U.S academic research vessels. R2R participates in ODIP, an international forum for improving the interoperability and effective sharing of marine data resources through technical workshops and joint prototypes. The vocabulary mapping effort lays a foundation for future ocean data portals through which users search and access international ocean data using familiar terms. R2R describes its data with a suite of controlled vocabularies (http://www.rvdata.us/voc) some of which were developed locally or are specific to the US. The goal of this student project is to crosswalk local/national vocabularies to authoritative international vocabularies, where they exist, or to vocabularies widely used by ODIP partners. Specifically, R2R developed the following crosswalks: R2R science party names to ORCID person identifiers, UNOLS ports to SeaDataNet Ports Gazetteer, R2R Device Models to NVS SeaVoX Device Catalog, and R2R Organizations to the European Directory of Marine Organizations (EDMO). Mappings were done in simple spreadsheets using synonymy relationships only, and will be published as part of the R2R Linked Data resources. The level of success in crosswalking was variable. The majority of ports were successfully mapped. Differences in the character sets (i.e. whether diacritic marks were used) caused automated matching to fail occasionally, but the number of ports was small enough that these could be manually

  15. Upwelling characteristics in the Gulf of Finland (Baltic Sea) as revealed by Ferrybox measurements in 2007-2013

    Science.gov (United States)

    Kikas, Villu; Lips, Urmas

    2016-07-01

    Ferrybox measurements have been carried out between Tallinn and Helsinki in the Gulf of Finland (Baltic Sea) on a regular basis since 1997. The system measures autonomously water temperature, salinity, chlorophyll a fluorescence and turbidity and takes water samples for further analyses at a predefined time interval. We aimed to show how the Ferrybox technology could be used to study the coastal upwelling events in the Gulf of Finland. Based on the introduced upwelling index and related criteria, 33 coastal upwelling events were identified in May-September 2007-2013. The number of events, as well as the frequency of their occurrence and intensity expressed as a sum of daily average temperature deviations in the 20 km wide coastal area, were almost equal near the northern and southern coasts. Nevertheless, the wind impulse, which was needed to generate upwelling events of similar intensity, differed between the northern and southern coastal areas. It is suggested that the general thermohaline structure adapted to the prevailing forcing and the estuarine character of the basin weaken the upwelling created by the westerly to southwesterly (up-estuary) winds and strengthen the upwelling created by the easterly to northeasterly (down-estuary) winds. Two types of upwelling events were identified - one characterized by a strong temperature front and the other revealing gradual decrease in temperature from the open sea to the coastal area, with maximum temperature deviation close to the shore.

  16. Phytoplankton community and environmental correlates in a coastal upwelling zone along western Taiwan Strait

    Science.gov (United States)

    Wang, Yu; Kang, Jian-hua; Ye, You-yin; Lin, Geng-ming; Yang, Qing-liang; Lin, Mao

    2016-02-01

    Upwelling system in western Taiwan Strait is important for facilitating the fishery production. This study investigated hydro-chemical properties, phytoplankton biomass, phytoplankton species composition, three-dimensional (horizontal, vertical and transect) distribution of phytoplankton abundance, as well as phytoplankton annual variation and the correlation of phytoplankton community with the upwelling of underlying current and nutrients according to samples of Fujian-Guangdong coastal upwelling zone in western Taiwan Strait from August 27 to September 8, 2009. The results manifest that the nutrient-rich cold and high salinity current on the continental shelf of South China Sea upwells to the Fujian-Guangdong coastal waters through Taiwan Bank and the surging strength to surface is weak while strong at 30-m layer. The thermohaline center of coastal upwelling shifts to the east of Dongshan Island and expanded to offshore waters in comparison with previous records. A total of 137 phytoplankton species belonging to 59 genera in 4 phyla are identified excluding the unidentified species. Diatom is the first major group and followed by dinoflagellate. Cyanobacteria mainly composed by three Trichodesmium species account for a certain proportions, while Chrysophyta are only found in offshore waters. The dominant species include Thalassionema nitzschioides, Pseudo-nitzschia pungens, Thalassionema frauenfeldii, Pseudo-nitzschia delicatissima, Rhizosolenia styliformis, Chaetoceros curvisetus, Diplopsalis lenticula and Trichodesmium thiebautii. Phytoplankton community mainly consists of eurythermal and eurytopic species, followed by warm-water species, tropic high-salinity species and oceanic eurythermic species in order. Phytoplankton abundance ranges from 1.00 × 102 ind./L ~ 437.22 × 102 ind./L with an average of 47.36 × 102 ind./L. For vertical distribution, maximum abundance is found at 30 m-depth and the surface comes second. Besides, the abundance below 30 m

  17. Heterotrophic bacterial production, respiration, and growth efficiency associated with upwelling intensity in the Ulleung Basin, East Sea

    Science.gov (United States)

    Kim, Bomina; Kim, Sung-Han; Kwak, Jung Hyun; Kang, Chang-Keun; Lee, Sang Heon; Hyun, Jung-Ho

    2017-09-01

    We investigated bacterial production (BP) and respiration (BR), as well as the physico-chemical properties of the water column, to elucidate the effect of upwelling on heterotrophic bacterial metabolic activities and growth efficiency (BGE) in July 2012 and May 2013 in the Ulleung Basin (UB), East/Japan Sea. The upwelled conditions were characterized by higher chlorophyll-a (Chl-a) concentrations resulting from the upward shift of the nitracline compared to that of the non-upwelled condition. Analyses of the size fractions of Chl-a and pigment composition revealed that large size phytoplankton (> 20 μm), mainly consisting of diatoms, appeared to be the major phytoplankton component. BP and BR were significantly correlated with Chl-a (P 0.05). These results suggest that bacterial metabolic activities are stimulated by the availability of organic resources enhanced by upwelling in the UB. Further statistical analysis showed that the difference in BP and BGE with variations in upwelling intensity were significant (P = 0.018 for BP, P = 0.035 for BGE), but the difference in BR was not significant (P = 0.321). These results suggest that metabolic energy is partitioned more for BP under a strong upwelling condition, i.e. high nutrient and Chl-a conditions. In contrast, the energy generated via respiration was partitioned more for maintaining metabolism rather than for biomass production under weakly or non-upwelled conditions, i.e. stratified and low Chl-a conditions. Overall, our results suggest that any changes in upwelling intensity would significantly affect the carbon cycle associated with the fate of primary production, and the role of the microbial loop in the UB where changes in the intensity and frequency of upwelling associated with climatic changes are in progress.

  18. Unobtrusive Software and System Health Management with R2U2 on a Parallel MIMD Coprocessor

    Science.gov (United States)

    Schumann, Johann; Moosbrugger, Patrick

    2017-01-01

    Dynamic monitoring of software and system health of a complex cyber-physical system requires observers that continuously monitor variables of the embedded software in order to detect anomalies and reason about root causes. There exists a variety of techniques for code instrumentation, but instrumentation might change runtime behavior and could require costly software re-certification. In this paper, we present R2U2E, a novel realization of our real-time, Realizable, Responsive, and Unobtrusive Unit (R2U2). The R2U2E observers are executed in parallel on a dedicated 16-core EPIPHANY co-processor, thereby avoiding additional computational overhead to the system under observation. A DMA-based shared memory access architecture allows R2U2E to operate without any code instrumentation or program interference.

  19. R2R - software to speed the depiction of aesthetic consensus RNA secondary structures

    Science.gov (United States)

    2011-01-01

    Background With continuing identification of novel structured noncoding RNAs, there is an increasing need to create schematic diagrams showing the consensus features of these molecules. RNA structural diagrams are typically made either with general-purpose drawing programs like Adobe Illustrator, or with automated or interactive programs specific to RNA. Unfortunately, the use of applications like Illustrator is extremely time consuming, while existing RNA-specific programs produce figures that are useful, but usually not of the same aesthetic quality as those produced at great cost in Illustrator. Additionally, most existing RNA-specific applications are designed for drawing single RNA molecules, not consensus diagrams. Results We created R2R, a computer program that facilitates the generation of aesthetic and readable drawings of RNA consensus diagrams in a fraction of the time required with general-purpose drawing programs. Since the inference of a consensus RNA structure typically requires a multiple-sequence alignment, the R2R user annotates the alignment with commands directing the layout and annotation of the RNA. R2R creates SVG or PDF output that can be imported into Adobe Illustrator, Inkscape or CorelDRAW. R2R can be used to create consensus sequence and secondary structure models for novel RNA structures or to revise models when new representatives for known RNA classes become available. Although R2R does not currently have a graphical user interface, it has proven useful in our efforts to create 100 schematic models of distinct noncoding RNA classes. Conclusions R2R makes it possible to obtain high-quality drawings of the consensus sequence and structural models of many diverse RNA structures with a more practical amount of effort. R2R software is available at http://breaker.research.yale.edu/R2R and as an Additional file. PMID:21205310

  20. R2R--software to speed the depiction of aesthetic consensus RNA secondary structures.

    Science.gov (United States)

    Weinberg, Zasha; Breaker, Ronald R

    2011-01-04

    With continuing identification of novel structured noncoding RNAs, there is an increasing need to create schematic diagrams showing the consensus features of these molecules. RNA structural diagrams are typically made either with general-purpose drawing programs like Adobe Illustrator, or with automated or interactive programs specific to RNA. Unfortunately, the use of applications like Illustrator is extremely time consuming, while existing RNA-specific programs produce figures that are useful, but usually not of the same aesthetic quality as those produced at great cost in Illustrator. Additionally, most existing RNA-specific applications are designed for drawing single RNA molecules, not consensus diagrams. We created R2R, a computer program that facilitates the generation of aesthetic and readable drawings of RNA consensus diagrams in a fraction of the time required with general-purpose drawing programs. Since the inference of a consensus RNA structure typically requires a multiple-sequence alignment, the R2R user annotates the alignment with commands directing the layout and annotation of the RNA. R2R creates SVG or PDF output that can be imported into Adobe Illustrator, Inkscape or CorelDRAW. R2R can be used to create consensus sequence and secondary structure models for novel RNA structures or to revise models when new representatives for known RNA classes become available. Although R2R does not currently have a graphical user interface, it has proven useful in our efforts to create 100 schematic models of distinct noncoding RNA classes. R2R makes it possible to obtain high-quality drawings of the consensus sequence and structural models of many diverse RNA structures with a more practical amount of effort. R2R software is available at http://breaker.research.yale.edu/R2R and as an Additional file.

  1. Improved liver R2* mapping by pixel-wise curve fitting with adaptive neighborhood regularization.

    Science.gov (United States)

    Wang, Changqing; Zhang, Xinyuan; Liu, Xiaoyun; He, Taigang; Chen, Wufan; Feng, Qianjin; Feng, Yanqiu

    2018-08-01

    To improve liver R2* mapping by incorporating adaptive neighborhood regularization into pixel-wise curve fitting. Magnetic resonance imaging R2* mapping remains challenging because of the serial images with low signal-to-noise ratio. In this study, we proposed to exploit the neighboring pixels as regularization terms and adaptively determine the regularization parameters according to the interpixel signal similarity. The proposed algorithm, called the pixel-wise curve fitting with adaptive neighborhood regularization (PCANR), was compared with the conventional nonlinear least squares (NLS) and nonlocal means filter-based NLS algorithms on simulated, phantom, and in vivo data. Visually, the PCANR algorithm generates R2* maps with significantly reduced noise and well-preserved tiny structures. Quantitatively, the PCANR algorithm produces R2* maps with lower root mean square errors at varying R2* values and signal-to-noise-ratio levels compared with the NLS and nonlocal means filter-based NLS algorithms. For the high R2* values under low signal-to-noise-ratio levels, the PCANR algorithm outperforms the NLS and nonlocal means filter-based NLS algorithms in the accuracy and precision, in terms of mean and standard deviation of R2* measurements in selected region of interests, respectively. The PCANR algorithm can reduce the effect of noise on liver R2* mapping, and the improved measurement precision will benefit the assessment of hepatic iron in clinical practice. Magn Reson Med 80:792-801, 2018. © 2018 International Society for Magnetic Resonance in Medicine. © 2018 International Society for Magnetic Resonance in Medicine.

  2. R2R - software to speed the depiction of aesthetic consensus RNA secondary structures

    Directory of Open Access Journals (Sweden)

    Weinberg Zasha

    2011-01-01

    Full Text Available Abstract Background With continuing identification of novel structured noncoding RNAs, there is an increasing need to create schematic diagrams showing the consensus features of these molecules. RNA structural diagrams are typically made either with general-purpose drawing programs like Adobe Illustrator, or with automated or interactive programs specific to RNA. Unfortunately, the use of applications like Illustrator is extremely time consuming, while existing RNA-specific programs produce figures that are useful, but usually not of the same aesthetic quality as those produced at great cost in Illustrator. Additionally, most existing RNA-specific applications are designed for drawing single RNA molecules, not consensus diagrams. Results We created R2R, a computer program that facilitates the generation of aesthetic and readable drawings of RNA consensus diagrams in a fraction of the time required with general-purpose drawing programs. Since the inference of a consensus RNA structure typically requires a multiple-sequence alignment, the R2R user annotates the alignment with commands directing the layout and annotation of the RNA. R2R creates SVG or PDF output that can be imported into Adobe Illustrator, Inkscape or CorelDRAW. R2R can be used to create consensus sequence and secondary structure models for novel RNA structures or to revise models when new representatives for known RNA classes become available. Although R2R does not currently have a graphical user interface, it has proven useful in our efforts to create 100 schematic models of distinct noncoding RNA classes. Conclusions R2R makes it possible to obtain high-quality drawings of the consensus sequence and structural models of many diverse RNA structures with a more practical amount of effort. R2R software is available at http://breaker.research.yale.edu/R2R and as an Additional file.

  3. Engineering Assessment and Certification of Integrity of the 177-R2 tank system

    International Nuclear Information System (INIS)

    Graser, D.A.; Schwartz, W.W.

    1993-10-01

    This Engineering Assessment and Certification of Integrity of retention tanks 177-R2U1, 177-R2Al, and 177-R2A2 has been prepared in response to 40 CFR 265.192(a) and 22 CCR 66265.192(a) for new tank systems that store hazardous waste and have secondary containment. The regulations require that this assessment be completed and certified by an independent, qualified, California-registered professional engineer before the tank system is placed in use as a hazardous waste storage tank system. The technical assessments for the 177-R2Ul, 177-R2A1, and 177-R2A2 tank systems have been reviewed by an independent, qualified, California-registered professional engineer, who has certified that the tank systems have sufficient structural integrity, are acceptable for transferring and storing hazardous waste, are compatible with the stored waste, and the tanks and containment system are suitably designed to achieve the requirements of the applicable regulations so they will not collapse, rupture, or fail. This document will be kept on file by the Lawrence Livermore National Laboratory (LLNL) Environment Protection Department

  4. R2R-printed inverted OPV modules - towards arbitrary patterned designs

    Science.gov (United States)

    Välimäki, M.; Apilo, P.; Po, R.; Jansson, E.; Bernardi, A.; Ylikunnari, M.; Vilkman, M.; Corso, G.; Puustinen, J.; Tuominen, J.; Hast, J.

    2015-05-01

    We describe the fabrication of roll-to-roll (R2R) printed organic photovoltaic (OPV) modules using gravure printing and rotary screen-printing processes. These two-dimensional printing techniques are differentiating factors from coated OPVs enabling the direct patterning of arbitrarily shaped and sized features into visual shapes and, increasing the freedom to connect the cells in modules. The inverted OPV structures comprise five layers that are either printed or patterned in an R2R printing process. We examined the rheological properties of the inks used and their relationship with the printability, the compatibility between the processed inks, and the morphology of the R2R-printed layers. We also evaluate the dimensional accuracy of the printed pattern, which is an important consideration in designing arbitrarily-shaped OPV structures. The photoactive layer and top electrode exhibited excellent cross-dimensional accuracy corresponding to the designed width. The transparent electron transport layer extended 300 µm beyond the designed values, whereas the hole transport layer shrank 100 µm. We also examined the repeatability of the R2R fabrication process when the active area of the module varied from 32.2 cm2 to 96.5 cm2. A thorough layer-by-layer optimization of the R2R printing processes resulted in realization of R2R-printed 96.5 cm2 sized modules with a maximum power conversion efficiency of 2.1% (mean 1.8%) processed with high functionality.

  5. Low-Concentration Tributyltin Decreases GluR2 Expression via Nuclear Respiratory Factor-1 Inhibition.

    Science.gov (United States)

    Ishida, Keishi; Aoki, Kaori; Takishita, Tomoko; Miyara, Masatsugu; Sakamoto, Shuichiro; Sanoh, Seigo; Kimura, Tomoki; Kanda, Yasunari; Ohta, Shigeru; Kotake, Yaichiro

    2017-08-11

    Tributyltin (TBT), which has been widely used as an antifouling agent in paints, is a common environmental pollutant. Although the toxicity of high-dose TBT has been extensively reported, the effects of low concentrations of TBT are relatively less well studied. We have previously reported that low-concentration TBT decreases α-amino-3-hydroxy-5-methylisoxazole-4-propionic acid (AMPA)-type glutamate receptor subunit 2 ( GluR2 ) expression in cortical neurons and enhances neuronal vulnerability to glutamate. However, the mechanism of this TBT-induced GluR2 decrease remains unknown. Therefore, we examined the effects of TBT on the activity of transcription factors that control GluR2 expression. Exposure of primary cortical neurons to 20 nM TBT for 3 h to 9 days resulted in a decrease in GluR2 mRNA expression. Moreover, TBT inhibited the DNA binding activity of nuclear respiratory factor-1 (NRF-1), a transcription factor that positively regulates the GluR2 . This result indicates that TBT inhibits the activity of NRF-1 and subsequently decreases GluR2 expression. In addition, 20 nM TBT decreased the expression of genes such as cytochrome c, cytochrome c oxidase (COX) 4, and COX 6c, which are downstream of NRF-1. Our results suggest that NRF-1 inhibition is an important molecular action of the neurotoxicity induced by low-concentration TBT.

  6. Low-Concentration Tributyltin Decreases GluR2 Expression via Nuclear Respiratory Factor-1 Inhibition

    Science.gov (United States)

    Ishida, Keishi; Aoki, Kaori; Takishita, Tomoko; Miyara, Masatsugu; Sakamoto, Shuichiro; Sanoh, Seigo; Kimura, Tomoki; Kanda, Yasunari; Ohta, Shigeru; Kotake, Yaichiro

    2017-01-01

    Tributyltin (TBT), which has been widely used as an antifouling agent in paints, is a common environmental pollutant. Although the toxicity of high-dose TBT has been extensively reported, the effects of low concentrations of TBT are relatively less well studied. We have previously reported that low-concentration TBT decreases α-amino-3-hydroxy-5-methylisoxazole-4-propionic acid (AMPA)-type glutamate receptor subunit 2 (GluR2) expression in cortical neurons and enhances neuronal vulnerability to glutamate. However, the mechanism of this TBT-induced GluR2 decrease remains unknown. Therefore, we examined the effects of TBT on the activity of transcription factors that control GluR2 expression. Exposure of primary cortical neurons to 20 nM TBT for 3 h to 9 days resulted in a decrease in GluR2 mRNA expression. Moreover, TBT inhibited the DNA binding activity of nuclear respiratory factor-1 (NRF-1), a transcription factor that positively regulates the GluR2. This result indicates that TBT inhibits the activity of NRF-1 and subsequently decreases GluR2 expression. In addition, 20 nM TBT decreased the expression of genes such as cytochrome c, cytochrome c oxidase (COX) 4, and COX 6c, which are downstream of NRF-1. Our results suggest that NRF-1 inhibition is an important molecular action of the neurotoxicity induced by low-concentration TBT. PMID:28800112

  7. Seasonal variations in groundwater upwelling zones in a Danish lowland stream analyzed using Distributed Temperature Sensing (DTS)

    DEFF Research Database (Denmark)

    Matheswaran, Karthikeyan; Blemmer, Morten; Rosbjerg, Dan

    2014-01-01

    –night temperature difference were applied to three DTS datasets representing stream temperature responses to the variable meteorological and hydrological conditions prevailing in summer, winter and spring. The standard deviation criterion was useful to identify groundwater discharge zones in summer and spring......-term deployment covering variable meteorological and hydrological scenarios. Copyright © 2012 John Wiley & Sons, Ltd....

  8. Seasonality in sub-surface chlorophyll maxima in the Arabian Sea: Detection by IRS-P4/OCM and implication of it to primary productivity

    Digital Repository Service at National Institute of Oceanography (India)

    Matondkar, S.G.P.; Parab, S.G.; Dwivedi, R.M.

    various seasons. During November at St. 1 surface chlorophyll a was 1.503 mgm-3and subsurface chlorophyll maxima was 12.692 mgm-3. Similarly, at St. 13 surface chlorophyll a was 0.584 mgm-3and surface chlorophyll maxima was 8.517 mgm-3. During upwelling...

  9. R2SM: a package for the analytic computation of the R2 Rational terms in the Standard Model of the Electroweak interactions

    International Nuclear Information System (INIS)

    Garzelli, M.V.

    2011-01-01

    The analytical package written in FORM presented in this paper allows the computation of the complete set of Feynman Rules producing the Rational terms of kind R 2 contributing to the virtual part of NLO corrections in the Standard Model of the Electroweak interactions. Building block topologies filled by means of generic scalars, vectors and fermions, allowing to build these Feynman Rules in terms of specific elementary particles, are explicitly given in the R ξ gauge class, together with the automatic dressing procedure to obtain the Feynman Rules from them. The results in more specific gauges, like the 't Hooft Feynman one, follow as particular cases, in both the HV and the FDH dimensional regularization schemes. As a check on our formulas, the gauge independence of the total Rational contribution (R 1 +R 2 ) to renormalized S-matrix elements is verified by considering the specific example of the H →γγ decay process at 1-loop. This package can be of interest for people aiming at a better understanding of the nature of the Rational terms. It is organized in a modular way, allowing a further use of some its files even in different contexts. Furthermore, it can be considered as a first seed in the effort towards a complete automation of the process of the analytical calculation of the R 2 effective vertices, given the Lagrangian of a generic gauge theory of particle interactions. (orig.)

  10. [Value of R2(*) in evaluating the biological behavior of primary hepatocellular carcinoma].

    Science.gov (United States)

    Tian, S F; Liu, A L; Liu, J H; Li, Y; Liu, X D; Huang, K; Song, Q W; Xu, M Z; Guo, W Y

    2016-04-19

    To investigate the correlation between R2(*) value of enhanced T2 star-weighted angiography (ESWAN) sequence and primary hepatocellular carcinoma infiltration and tumor thrombus, and investigate the biological behavior of HCC. A total of 221 cases of patients' imaging data with MRI examination(including ESWAN sequence) diagnosed as primary HCC were retrospectively analyzed.All the patients were collected from January 2014 to September 2015 in the First Affiliated Hospital of Dalian Medical University.The differences of R2(*) values in different MR types of HCC were analyzed.All patients were divided into infiltration group and non-infiltration group, tumor thrombus group and non-tumor thrombus group, the R2(*) values of the paired groups were compared.The diagnostic efficiency of R2(*) in HCC infiltration and tumor thrombus were evaluated by ROC curve, and to find out the threshold values. The MR types of 221 patients included 90 cases of nodular type, 62 cases of massive type, 69 cases of diffuse type.70 patients had tumor thrombus.The R2(*) values of different MR types were (21.82±8.52), (24.17±8.84)and (34.45±11.73) Hz, respectively.There was no statistically significant difference between the nodular and the massive types (P=0.144), while the difference between the nodular and diffuse type, the massive and diffuse types were statistically significant(P=0.000). The R2(*) values of infiltration group and non-infiltration group were (34.45±11.73) and (22.78±8.70) Hz , the R2(*) values of tumor thrombus group and non-tumor thrombus group were (31.20±12.17) and (24.21±9.90) Hz, the difference also had statistically significant(t=7.397 and 4.534, P=0.000 and 0.000). The AUC of R2(*) values for infiltration and tumor thrombus were 0.804, 0.681. R2(*) ≥24.68 Hz was the threshold value to diagnose the infiltration and tumor thrombus. R2(*) value can be used as a MR non-enhancement quantitative index to evaluate the biological behavior of HCC.

  11. In Vivo Quantification of Cerebral R2FNx01-Response to Graded Hyperoxia at 3 Tesla

    Directory of Open Access Journals (Sweden)

    Grigorios Gotzamanis

    2015-01-01

    Full Text Available Objectives: This study aims to quantify the response of the transverse relaxation rate of the magnetic resonance (MR signal of the cerebral tissue in healthy volunteers to the administration of air with step-wise increasing percentage of oxygen. Materials and Methods: The transverse relaxation rate (R2FNx01 of the MR signal was quantified in seven volunteers under respiratory intake of normobaric gas mixtures containing 21, 50, 75, and 100% oxygen, respectively. End-tidal breath composition, arterial blood saturation (SaO 2 , and heart pulse rate were monitored during the challenge. R2FNx01 maps were computed from multi-echo, gradient-echo magnetic resonance imaging (MRI data, acquired at 3.0T. The average values in the segmented white matter (WM and gray matter (GM were tested by the analysis of variance (ANOVA, with Bonferroni post-hoc correction. The GM R2FNx01-reactivity to hyperoxia was modeled using the Hill′s equation. Results: Graded hyperoxia resulted in a progressive and significant (P < 0.05 decrease of the R2FNx01 in GM. Under normoxia the GM-R2FNx01 was 17.2 ± 1.1 s -1 . At 75% O 2 supply, the R2FNx01 had reached a saturation level, with 16.4 ± 0.7 s -1 (P = 0.02, without a significant further decrease for 100% O 2 . The R2FNx01-response of GM correlated positively with CO 2 partial pressure (R = 0.69 ± 0.19 and negatively with SaO 2 (R = -0.74 ± 0.17. The WM showed a similar progressive, but non-significant, decrease in the relaxation rates, with an increase in oxygen intake (P = 0.055. The Hill′s model predicted a maximum R2FNx01 response of the GM, of 3.5%, with half the maximum at 68% oxygen concentration. Conclusions: The GM-R2FNx01 responds to hyperoxia in a concentration-dependent manner, suggesting that monitoring and modeling of the R2FNx01-response may provide new oxygenation biomarkers for tumor therapy or assessment of cerebrovascular reactivity in patients.

  12. Modelling shelf-ocean exchange and its biogeochemical consequences in coastal upwelling systems

    DEFF Research Database (Denmark)

    Muchamad, Al Azhar

    margin bathymetry, and 3) what processes determine the observed variability of total organic carbon (TOC) content in shelf sediments underlying the upwelling system, with implications for the formation of petroleum source rocks. Here, a numerical ocean modeling approach is used in this thesis to explore...... processes and the development of anoxia/euxinia under the present day or past geological conditions. Thirdly and last, processes controlling distribution of total organic carbon (TOC) content in sediments across the continental margin is evaluated by application of the model to the Benguela upwelling system....... In the model, biological primary production and shelf bottom-water anoxia result in enhanced sedimentary TOC concentrations on the mid shelf and upper slope. The simulated TOCs implicate that bottom lateral transport only has a significant effect on increasing the deposition of the organic carbon on the mid...

  13. Fish species composition, density-distribution patterns, and impingement during upwelling

    International Nuclear Information System (INIS)

    Spigarelli, S.A.; Sharma, R.K.

    1975-01-01

    The effects of cooling system intakes and discharges on Lake Michigan fishes are highly dependent on inshore species composition and spatial distribution which, in turn, are affected by natural hydrological conditions. Significant (5 to 10 C) short-term decreases in water temperature (due to upwelling) could cause cold shock in fish equilibrated to either ambient or plume temperatures; substantial changes in distribution due to avoidance or attraction responses; and resultant changes in susceptibility to impingement. The objectives of this study are to characterize the changes in fish species composition, density, and thermal distribution as a result of natural upwellings, and to relate these factors to intake and discharge effects. Day and night sampling was conducted in ambient (reference) and thermal plume waters near the Zion Nuclear Plant on four occasions between 17 July and 11 September 1975. Density-distribution patterns and species composition of fish were determined by means of gill nets, bottom trawls, seines, and a sonic fish locater

  14. Does deep ocean mixing drive upwelling or downwelling of abyssal waters?

    Science.gov (United States)

    Ferrari, R. M.; McDougall, T. J.; Mashayek, A.; Nikurashin, M.; Campin, J. M.

    2016-02-01

    It is generally understood that small-scale mixing, such as is caused by breaking internal waves, drives upwelling of the densest ocean waters that sink to the ocean bottom at high latitudes. However the observational evidence that the turbulent fluxes generated by small-scale mixing in the stratified ocean interior are more vigorous close to the ocean bottom than above implies that small-scale mixing converts light waters into denser ones, thus driving a net sinking of abyssal water. Using a combination of numerical models and observations, it will be shown that abyssal waters return to the surface along weakly stratified boundary layers, where the small-scale mixing of density decays to zero. The net ocean meridional overturning circulation is thus the small residual of a large sinking of waters, driven by small-scale mixing in the stratified interior, and a comparably large upwelling, driven by the reduced small-scale mixing along the ocean boundaries.

  15. Episodic Upwelling of Zooplankton within a Bowhead Whale Feeding Area Near Barrow, AK

    Science.gov (United States)

    2013-09-30

    recorders. 4. Determine the correlations between exchange events and wind speed and direction , wind duration, ice cover, shelf water column...sample over longer time periods in that region in order to better describe the impact of the strength and magnitude of the wind on upwelling along the...oceanography of the shelf is complex, dynamic, and highly variable and that advection is closely coupled to the direction and magnitude of the winds . In

  16. Interspecific differences in depth preference: Regulation of larval transport in an upwelling system

    OpenAIRE

    Miller, SH; Morgan, SG

    2013-01-01

    Dispersal is fundamental to understanding the ecology and evolution of species and effectively managing resources, but information on dispersal is rare for the vast majority of marine life that develops as miniscule larvae in the plankton. Until recent evidence to the contrary, it was widely suspected that larvae developing in productive upwelling regimes along eastern ocean margins are susceptible to cross-shelf transport by strong, dynamic currents and often are unable to replenish populati...

  17. Contrasting biogeochemical responses of ENSO induced upwelling variability in the Humboldt Current System

    Science.gov (United States)

    Franco, Ana C.; Gruber, Nicolas; Münnich, Matthias

    2017-04-01

    The Humboldt Current System (HCS) is one of the most productive ecosystems in the world. This high productivity is supported by a large input of nutrients from the subsurface layers to the surface due to year-round upwelling. However, upwelling also supplies waters with low pH and low aragonite saturation state potentially affecting many organisms, especially those that calcify. The influence, extent and source of upwelled water vary substantially on interannual timescales in association with the El Niño/Southern Oscillation (ENSO) phenomenon, generating natural contrasting responses on the biogeochemistry of this system. Here we analyze these responses using an eddy resolving, basin-scale ocean model that covers the whole Pacific Ocean with high resolution (4 km) on the west coast of South America. We performed a simulation of the last 30 years (hindcast simulation) that allows us to investigate the influence of at least eight El Niño episodes and eight La Niña episodes on productivity variations and changes in oxygen concentration and aragonite saturation state. An absolute change in surface omega aragonite of almost 2 units, as well as an absolute change of the aragonite saturation depth of 200 m result from the change of an El Niño phase to a La Niña phase. This variability is on the same order of magnitude as the projected change in the aragonite saturation state in a centennial timescale. During La Niña events, a lower aragonite saturation state values and reduced oxygen concentration in the surface layer are a direct consequence of enhanced upwelling and increased net primary productivity. The opposite is true during El Niño events, where high values of omega aragonite occur in concordance with extraordinarily low net primary productivity values.

  18. Convergent tectonics and coastal upwelling: a history of the Peru continental margin ( Pacific).

    Science.gov (United States)

    von Huene, Roland E.; Suess, E.; Emeis, K.C.

    1987-01-01

    Late in 1986, scientists on the ODP drillship JOIDES Resolution confirmed that the upper slope of the Peruvian margin consists of continental crust whereas the lower slope comprises an accretionary complex. An intricate history of horizontal and vertical movements can be detected, and the locations of ancient centers of upwelling appear to have varied, partly due to tectonic movements of the margin. In this review of Leg 112, the 3 scientific leaders on this cruise discuss their results. -from Journal Editor

  19. Biogenic halocarbons from the Peruvian upwelling region as tropospheric halogen source

    Directory of Open Access Journals (Sweden)

    H. Hepach

    2016-09-01

    Full Text Available Halocarbons are produced naturally in the oceans by biological and chemical processes. They are emitted from surface seawater into the atmosphere, where they take part in numerous chemical processes such as ozone destruction and the oxidation of mercury and dimethyl sulfide. Here we present oceanic and atmospheric halocarbon data for the Peruvian upwelling zone obtained during the M91 cruise onboard the research vessel METEOR in December 2012. Surface waters during the cruise were characterized by moderate concentrations of bromoform (CHBr3 and dibromomethane (CH2Br2 correlating with diatom biomass derived from marker pigment concentrations, which suggests this phytoplankton group is a likely source. Concentrations measured for the iodinated compounds methyl iodide (CH3I of up to 35.4 pmol L−1, chloroiodomethane (CH2ClI of up to 58.1 pmol L−1 and diiodomethane (CH2I2 of up to 32.4 pmol L−1 in water samples were much higher than previously reported for the tropical Atlantic upwelling systems. Iodocarbons also correlated with the diatom biomass and even more significantly with dissolved organic matter (DOM components measured in the surface water. Our results suggest a biological source of these compounds as a significant driving factor for the observed large iodocarbon concentrations. Elevated atmospheric mixing ratios of CH3I (up to 3.2 ppt, CH2ClI (up to 2.5 ppt and CH2I2 (3.3 ppt above the upwelling were correlated with seawater concentrations and high sea-to-air fluxes. During the first part of the cruise, the enhanced iodocarbon production in the Peruvian upwelling contributed significantly to tropospheric iodine levels, while this contribution was considerably smaller during the second part.

  20. Changes in upwelling and surface productivity in the Eastern Pacific during Terminations I and II

    Science.gov (United States)

    Erdem, Z.; De Bar, M.; Stolwijk, D.; Schneider, R. R.; S Sinninghe Damsté, J.; Schouten, S.

    2017-12-01

    The Eastern Pacific coastal system is characterized by intense upwelling and consequently by an enhanced surface primary productivity. Combination of this high organic matter flux with sluggish bottom water ventilation results in one of the most pronounced oxygen minimum zones reaching from offshore California in the North to offshore Chile in the South. As a result of this process, the region is particularly interesting in view of nutrient and carbon cycling as well as ecosystem dynamics. The dynamics of the upwelling and oxygen concentrations are closely related to climatic conditions. Therefore, paleo-reconstructions of different settings are crucial in order to improve our understanding of the response of these nutrient-rich, oxygen-deficient, environments in relation to the recent global ocean warming, acidification and deoxygenation. In this study, we present downcore results from three different sites in the Eastern Pacific: offshore California (IODP site 1012), Peru (M77/2-52-2) and Chile (IODP site 1234). We applied different biomarkers as proxies to decipher changes in phytoplankton community composition, including the upwelling index based on long chain diols, and other common productivity indicators such as bulk organic carbon, carbonate and biogenic opal. In addition, application of carbon and nitrogen isotope ratios of total organic carbon and benthic foraminifera complement our multiproxy approach. Herewith we aim to compare at least two glacial-interglacial transitions with different magnitudes of deglacial warming along the Eastern Pacific upwelling systems at different latitudes. The data presented will cover the last 160 ka BP offshore California and Chile, and 30 ka BP offshore Peru enabling comparison between glacial Terminations I and II.

  1. REGIONAL AIR-SEA INTERACTION (RASI) GAP WIND AND COASTAL UPWELLING EVENTS CLIMATOLOGY GULF OF PAPAGAYO, COSTA RICA V1

    Data.gov (United States)

    National Aeronautics and Space Administration — The Regional Air-Sea Interactions (RASI) Gap Wind and Coastal Upwelling Events Climatology Gulf of Papagayo, Costa Rica dataset was created using an automated...

  2. Influence of upwelling induced near shore hypoxia on the Alappuzha mud banks, South West Coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    GireeshKumar, T.R.; Mathew, D.; Pratihary, A.K.; Naik, H.; Narvekar, K.U.; Araujo, J.; Balachandran, K.K.; Muraleedharan, K.R.; Thorat, B.R.; Nair, M.; Naqvi, S.W.A.

    The results of the first time-series measurements spanning 18-weeks (22 April to 20 September 2014) from a coastal environment (Alappuzha, southwest India), where two process of upwelling and mud banks are concurrent during summer monsoon...

  3. Estimates of upwelling rates in the Arabian Sea and the equatorial Indian Ocean based on bomb radiocarbon.

    Science.gov (United States)

    Bhushan, R; Dutta, K; Somayajulu, B L K

    2008-10-01

    Radiocarbon measurements were made in the water column of the Arabian Sea and the equatorial Indian Ocean during 1994, 1995 and 1997 to assess the temporal variations in bomb 14C distribution and its inventory in the region with respect to GEOSECS measurements made during 1977-1978. Four GEOSECS stations were reoccupied (three in the Arabian Sea and one in the equatorial Indian Ocean) during this study, with all of them showing increased penetration of bomb 14C along with decrease in its surface water activity. The upwelling rates derived by model simulation of bomb 14C depth profile using the calculated exchange rates ranged from 3 to 9 m a(-1). The western region of the Arabian Sea experiencing high wind-induced upwelling has higher estimated upwelling rates. However, lower upwelling rates obtained for the stations occupied during this study could be due to reduced 14C gradient compared to that during GEOSECS.

  4. Influence of upwelling and tropical environments on the breeding development of the intertidal barnacle Tetraclita stalactifera (Lamarck, 1818

    Directory of Open Access Journals (Sweden)

    Luis Felipe Skinner

    2011-12-01

    Full Text Available Cabo Frio, with its unique oceanographic conditions, is an important biogeographical transitional region between tropical and sub-tropical waters. This is due to the presence of upwelling from the Central Water of the South Atlantic (CWSA, and the presence of tropical waters from the Brazilian Current (BC and Coastal Water (CW. The intertidal barnacle, Tetraclita stalactifera, and its brooding stages were analyzed to correlate environmental conditions with reproductive development. Two thermal contrasting sites were chosen: Ponta da Cabeça (PC, which is under the influence of seasonal upwelling, and Ponta da Fortaleza (PF which experiences tropical influences. At each site, T. stalactifera specimens were collected monthly and their egg lamellae conditions classified into stages from 0 (empty to IV (ready to release. Our results show a seasonal effect on brooding at the PC site and a continuous development at the PF site. Nauplii larval availability also followed this trend. Differences between the sites could be due to ecological differences related to water temperature and the ecological-physiological response of the barnacles to these differences.Cabo Frio, devido suas características oceanográficas, causado pela é uma importante região biogeográfica transicional entre águas tropicais e sub-tropicais. Isto é ressurgência da Água Central do Atlântico Sul (ACAS e a presença de águas tropicais da Corrente do Brasil (CB e de Água Costeira (AC. A craca do mediolitoral Tetraclita stalactifera e seus estágios de maturação larval foram analisados a fim de serem correlacionados às condições ambientais. Dois locais com características termais contrastantes foram escolhidos: a Ponta da Cabeça (PC, que está sobre influência sazonal da ressurgência e a Ponta da Fortaleza (PF, sob influência da água tropical. Em cada local, indivíduos de T. stalactifera foram coletados mensalmente e a condição de suas lamellas ovígeras aferida

  5. Resource partitioning within major bottom fish species in a highly productive upwelling ecosystem

    Science.gov (United States)

    Abdellaoui, Souad; El Halouani, Hassan; Tai, Imane; Masski, Hicham

    2017-09-01

    The Saharan Bank (21-26°N) is a wide subtropical continental shelf and a highly productive upwelling ecosystem. The bottom communities are dominated by octopus and sparid fish, which are the main targets of bottom-trawl fishing fleets. To investigate resource partitioning within the bottom fish community, adult fish from 14 of the most abundant species were investigated for stomach content analysis. Samples were collected during two periods: October 2003 and May 2007. The diet of the analysed species showed more variation between periods than between size classes, suggesting that temporal or spatial variability in prey availability appears to play a significant role in their diet. Multivariate analysis and subsequent clustering led to a grouping of the species within five trophic guilds. Two species were fish feeders, and the others mainly fed on benthic invertebrates, where epibenthic crustaceans, lamellibranchs and fish were the most important groups in defining trophic guilds. We found that the studied species had a high rate of overlapping spatial distributions and overlapping trophic niches. In this highly productive upwelling ecosystem, where food resources may not be a limiting factor, inter-specific competition did not appear to be an important factor in structuring bottom fish communities. For the species that showed differences in the proportions of prey categories in comparison with other ecosystems, the rise of the proportion of epibenthic crustaceans in their diet was a common feature; a possible consequence of the benthic productivity of this highly productive upwelling ecosystem.

  6. Mantle upwellings and convective instabilities revealed by seismic tomography and helium isotope geochemistry beneath eastern Africa

    Science.gov (United States)

    Montagner, Jean-Paul; Marty, Bernard; Stutzmann, Eléonore; Sicilia, Déborah; Cara, Michel; Pik, Raphael; Lévêque, Jean-Jacques; Roult, Geneviève; Beucler, Eric; Debayle, Eric

    2007-11-01

    The relationship between intraplate volcanism and continental tectonics has been investigated for North and East Africa using a high resolution three-dimensional anisotropic tomographic model derived from seismic data of a French experiment ``Horn of Africa'' and existing broadband data. The joint inversion for seismic velocity and anisotropy of the upper 400 km of the mantle, and geochemical data reveals a complex interaction between mantle upwellings, and lithosphere. Two kinds of mantle upwellings can be distinguished: The first one, the Afar ``plume'' originates from deeper than 400 km and is characterized by enrichment in primordial 3He and 3He/4He ratios higher than those along mid-ocean ridges (MOR). The second one, associated with other Cenozoic volcanic provinces (Darfur, Tibesti, Hoggar, Cameroon), with 3He/4He ratios similar to, or lower than MOR, is a consequence of shallower upwelling. The presumed asthenospheric convective instabilities are oriented in an east-west direction, resulting from interaction between south-north asthenospheric mantle flow, main plume head and topography on the base of lithosphere.

  7. Response of the Benguela upwelling systems to spatial variations in the wind stress

    Science.gov (United States)

    Fennel, Wolfgang; Junker, Tim; Schmidt, Martin; Mohrholz, Volker

    2012-08-01

    In this paper we combine field observations, numerical modeling and an idealized analytical theory to study some features of the Benguela upwelling system. The current system can be established through a combination of observations and realistic simulations with an advanced numerical model. The poleward undercurrent below the equator-ward coastal jet is often found as a countercurrent that reaches the sea surface seaward of the coastal jet. The coastal band of cold upwelled water appears to broaden from south to north and at the northern edge of the wind band an offshore flow is often detected, which deflects the coastal Angola current to the west. These features can be explained and understood with an idealized analytical model forced by a spatially variable wind. A crucial role is played by the wind stress curl, which shapes the oceanic response through Ekman-pumping. The interplay of the curl driven effects and the coastal Ekman upwelling together with the coastal jet, Kelvin waves, and the undercurrent is the key to understand the formation of the three-dimensional circulation patterns in the Benguela system. While the numerical model is based on the full set of primitive equations, realistic topography and forcing, the analytic model uses a linear, flat-bottomed f-plane ocean, where the coast is a straight wall and the forcing is represented by an alongshore band of dome-shaped wind stress. Although the analytical model is highly idealized it is very useful to grasp the basic mechanisms leading to the response patterns.

  8. Future changes in coastal upwelling ecosystems with global warming: The case of the California Current System.

    Science.gov (United States)

    Xiu, Peng; Chai, Fei; Curchitser, Enrique N; Castruccio, Frederic S

    2018-02-12

    Coastal upwelling ecosystems are among the most productive ecosystems in the world, meaning that their response to climate change is of critical importance. Our understanding of climate change impacts on marine ecosystems is largely limited to the open ocean, mainly because coastal upwelling is poorly reproduced by current earth system models. Here, a high-resolution model is used to examine the response of nutrients and plankton dynamics to future climate change in the California Current System (CCS). The results show increased upwelling intensity associated with stronger alongshore winds in the coastal region, and enhanced upper-ocean stratification in both the CCS and open ocean. Warming of the open ocean forces isotherms downwards, where they make contact with water masses with higher nutrient concentrations, thereby enhancing the nutrient flux to the deep source waters of the CCS. Increased winds and eddy activity further facilitate upward nutrient transport to the euphotic zone. However, the plankton community exhibits a complex and nonlinear response to increased nutrient input, as the food web dynamics tend to interact differently. This analysis highlights the difficulty in understanding how the marine ecosystem responds to a future warming climate, given to range of relevant processes operating at different scales.

  9. Comparative study of potential transfer of natural and anthropogenic cadmium to plankton communities in the North-West African upwelling

    International Nuclear Information System (INIS)

    Auger, P.A.; Machu, E.; Gorgues, T.; Grima, N.; Waeles, M.

    2015-01-01

    A Lagrangian approach based on a physical–biogeochemical modeling was used to compare the potential transfer of cadmium (Cd) from natural and anthropogenic sources to plankton communities (Cd-uptake) in the North-West African upwelling. In this region, coastal upwelling was estimated to be the main natural source of Cd while the most significant anthropogenic source for marine ecosystem is provided by phosphate industry. In our model experiment, Cd-uptake (natural or anthropogenic) in the North-West African upwelling is the result of an interplay between the Cd dispersion (by advection processes) and the simulated biological productivity. In the Moroccan waters, advection processes limit the residence time of water masses resulting in a low natural Cd-uptake by plankton communities while anthropogenic Cd-uptake is high. As expected, the situation is reversed in the Senegalo-Mauritanian upwelling where natural Cd-uptake is higher than anthropogenic Cd-uptake. Based upon an estimate of Cd sources, our modeling study shows, unexpectedly, that the anthropogenic signal of potential Cd-bioaccumulation in the Moroccan upwelling is of the same order of magnitude as the natural signal mainly present in the Senegalo-Mauritanian upwelling region. A comparison with observed Cd levels in mollusk and fishes, which shows overall agreement with our simulations, is confirming our estimates. - Highlights: • We model the physical–biogeochemical dynamics in the North-West African upwelling. • We model the transport of cadmium from natural and anthropogenic sources. • We derive proxies of potential cadmium absorption and bioaccumulation in the plankton food chain. • The anthropogenic signal off Morocco at least equals the natural upwelling signal off Mauritania. • We compare our results with observed cadmium levels in mollusks and fishes

  10. Far-reaching transport of Pearl River plume water by upwelling jet in the northeastern South China Sea

    Science.gov (United States)

    Chen, Zhaoyun; Pan, Jiayi; Jiang, Yuwu; Lin, Hui

    2017-09-01

    Satellite images from the Moderate Resolution Imaging Spectroradiometer (MODIS) show that there was a belt of turbid water appearing along an upwelling front near the Chinese coast of Guangdong, and indicate that the turbid water of the Pearl River plume water could be transported to a far-reaching area east of the Taiwan Bank. Numerical modeling results are consistent with the satellite observations, and reveal that a strong jet exists at the upwelling front with a speed as high as 0.8 m s- 1, which acts as a pathway for transporting the high-turbidity plume water. The dynamical analysis suggests that geostrophic equilibrium dominates in the upwelling front and plume areas, and the baroclinicity of the upwelling front resulting from the horizontal density gradient is responsible for the generation of the strong jet, which enhances the far-reaching transport of the terrigenous nutrient-rich water of the Pearl River plume. Model sensitivity analyses also confirm that this jet persists as long as the upwelling front exists, even when the wind subsides and becomes insignificant. Further idealized numerical model experiments indicate that the formation and persistence of the upwelling front jet depend on the forcing strength of the upwelling-favorable wind. The formation time of the jet varies from 15 to 158 h as the stress of the upwelling-favorable wind changes from 0.2 to 0.01 N m- 2. With the persistent transport of the nutrient-rich plume water, biophysical activities can be promoted significantly in the far-reaching destination area of the oligotrophic water.

  11. Comparative study of potential transfer of natural and anthropogenic cadmium to plankton communities in the North-West African upwelling

    Energy Technology Data Exchange (ETDEWEB)

    Auger, P.A., E-mail: pierreamael.auger@gmail.com [Laboratoire de Physique des Océans (LPO), UMR-CNRS 6523/IFREMER/IRD/UBO, BP70, 29280 Plouzané (France); Machu, E.; Gorgues, T.; Grima, N. [Laboratoire de Physique des Océans (LPO), UMR-CNRS 6523/IFREMER/IRD/UBO, BP70, 29280 Plouzané (France); Waeles, M. [Université de Bretagne Occidentale (UBO), Laboratoire de l' Environnement Marin (LEMAR), UMR-CNRS 6539/IRD/UBO, place N. Copernic, 29280 Plouzané (France)

    2015-02-01

    A Lagrangian approach based on a physical–biogeochemical modeling was used to compare the potential transfer of cadmium (Cd) from natural and anthropogenic sources to plankton communities (Cd-uptake) in the North-West African upwelling. In this region, coastal upwelling was estimated to be the main natural source of Cd while the most significant anthropogenic source for marine ecosystem is provided by phosphate industry. In our model experiment, Cd-uptake (natural or anthropogenic) in the North-West African upwelling is the result of an interplay between the Cd dispersion (by advection processes) and the simulated biological productivity. In the Moroccan waters, advection processes limit the residence time of water masses resulting in a low natural Cd-uptake by plankton communities while anthropogenic Cd-uptake is high. As expected, the situation is reversed in the Senegalo-Mauritanian upwelling where natural Cd-uptake is higher than anthropogenic Cd-uptake. Based upon an estimate of Cd sources, our modeling study shows, unexpectedly, that the anthropogenic signal of potential Cd-bioaccumulation in the Moroccan upwelling is of the same order of magnitude as the natural signal mainly present in the Senegalo-Mauritanian upwelling region. A comparison with observed Cd levels in mollusk and fishes, which shows overall agreement with our simulations, is confirming our estimates. - Highlights: • We model the physical–biogeochemical dynamics in the North-West African upwelling. • We model the transport of cadmium from natural and anthropogenic sources. • We derive proxies of potential cadmium absorption and bioaccumulation in the plankton food chain. • The anthropogenic signal off Morocco at least equals the natural upwelling signal off Mauritania. • We compare our results with observed cadmium levels in mollusks and fishes.

  12. The correlation between R2' and bone mineral measurements in human vertebrae: an in vitro study

    International Nuclear Information System (INIS)

    Brismar, T.B.; Karlsson, M.; Li, T.Q.; Ringertz, H.

    1999-01-01

    The aim of this study was to investigate whether MR imaging of trabecular bone structure using magnetic inhomogeneity measurements is related to the amount of bone mineral in human vertebrae. Weight, bone mineral content (BMC DXA ), bone mineral per area (BMA DXA ) and bone mineral density (BMD CT ) were determined in 12 defatted human lumbar vertebrae (L2-L4) by weighing, dual X-ray absorptiometry (DXA) and CT. Inhomogeneity caused by susceptibility differences between trabecular bone and surrounding water was studied with MR imaging at 1.5 T using the GESFIDE sequence. The pulse sequence determines the transverse relaxation rate R2 * and its two components, the non-reversible transverse relaxation rate (R2) and the reversible transverse relaxation rate (R2'; i. e. relaxation rate due to magnetic susceptibility) in a single scan. Voxel size was 0.9 x 1.9 x 5.0 mm. Positive significant correlations between R2' and weight, BMC DXA , BMA DXA and BMD CT were observed (r > 0.61 and p DXA and BMD CT (r > 0.66 and p DXA . Thus, R2' measurements are related to the amount of bone mineral, but they also provide information which is not obtainable from bone mineral measurements. (orig.) (orig.)

  13. Prenatal Exposure to Tributyltin Decreases GluR2 Expression in the Mouse Brain.

    Science.gov (United States)

    Ishida, Keishi; Saiki, Takashi; Umeda, Kanae; Miyara, Masatsugu; Sanoh, Seigo; Ohta, Shigeru; Kotake, Yaichiro

    2017-01-01

    Tributyltin (TBT), a common environmental contaminant, is widely used as an antifouling agent in paint. We previously reported that exposure of primary cortical neurons to TBT in vitro decreased the α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptor subunit glutamate receptor 2 (GluR2) expression and subsequently increased neuronal vulnerability to glutamate. Therefore, to identify whether GluR2 expression also decreases after TBT exposure in vivo, we evaluated the changes in GluR2 expression in the mouse brain after prenatal or postnatal exposure to 10 and 25 ppm TBT through pellet diets. Although the mean feed intake and body weight did not decrease in TBT-exposed mice compared with that in control mice, GluR2 expression in the cerebral cortex and hippocampus decreased after TBT exposure during the prenatal period. These results indicate that a decrease in neuronal GluR2 may be involved in TBT-induced neurotoxicity, especially during the fetal period.

  14. Effects of microwave exposure on motor learning and GluR2 phosphorylation in rabbit cerebellum

    International Nuclear Information System (INIS)

    Liu Yong; Wang Denggao; Zhang Guangbin; Zhou Wen; Yang Xuesen

    2007-01-01

    Objective: To investigate the effects of microwave exposure on motor learning and Glutamate receptor 2(GluR2) phosphorylation in rat cerebellum. Methods: The rabbits were trained for seven days to form eye-blink conditioning, and then divided randomly into control and microwave exposure group (at hours 0,3,24 and 72 subgroups after exposure, respectively). The rabbits were accepted 90 mW/cm 2 microwave exposure for 30 minutes, and the rectal temperature were detected immediately after exposure and specific absorption rate (SAR) value were calculated. Eye-blink conditioning were detected immediately after exposure, and cerebellar GluR2 protein and GluR2 phosphorylation were detected with Western blotting. Results: Rectal temperature of rabbits were increased by 3.02 degree C after exposure, and SAR value was 8.74 W/kg. The eye-blink conditioning decreased significantly after exposure, and cerebellar GluR2 protein expression had no significant alteration but phosphorylation reduced significantly after exposure. Conclusions: 90 mW/cm 2 microwave exposure has injurious effects on cerebellar GluR2 phosphorylation and motor learning. (authors)

  15. Particle Fluxes and Bulk Geochemical Characterization of the Cabo Frio Upwelling System in Southeastern Brazil: Sediment Trap Experiments between Spring 2010 and Summer 2012

    Directory of Open Access Journals (Sweden)

    ANA LUIZA S. ALBUQUERQUE

    2014-06-01

    Full Text Available Physical and biogeochemical processes in continental shelves act synergistically in both transporting and transforming suspended material, and ocean dynamics control the dispersion of particles by the coastal zone and their subsequent mixing and dilution within the shelf area constrained by oceanic boundary currents, followed by their gradual settling in a complex sedimentary scenario. One of these regions is the Cabo Frio Upwelling System located in a significantly productive area of Southeastern Brazil, under the control of the nutrient-poor western boundary Brazil Current but also with a wind-driven coastal upwelling zone, inducing cold-water intrusions of South Atlantic Central Water on the shelf. To understand these synergic interactions among physical and biogeochemical processes in the Cabo Frio shelf, a series of four experiments with a total of 98 discrete samples using sediment traps was performed from November 2010 to March 2012, located on the 145 m isobath on the edge of the continental shelf. The results showed that lateral transport might be relevant in some cases, especially in deep layers, although no clear seasonal cycle was detected. Two main physical-geochemical coupling scenarios were identified: singular downwelling events that can enhance particles fluxes and are potentially related to the Brazil Current oscillations; and events of significant fluxes related to the intrusion of the 18°C isotherm in the euphotic zone. The particulate matter settling in the Cabo Frio shelf area seems to belong to multiple marine and terrestrial sources, in which both Paraiba do Sul River and Guanabara Bay could be potential land-sources, although the particulate material might subject intense transformation (diagenesis during its trajectory to the shelf edge.

  16. Distribution and evolution of sterols and aliphatic hydrocarbons in dated marine sediment cores from the Cabo Frio upwelling region, SW Atlantic, Brazil.

    Science.gov (United States)

    Lourenço, Rafael André; Martins, César C; Taniguchi, Satie; Mahiques, Michel Michaelovitch; Montone, Rosalinda Carmela; Magalhães, Caio Augusto; Bícego, Márcia Caruso

    2017-08-01

    We report the distribution of selected lipid biomarkers specifically sterols and aliphatic hydrocarbons in sediment cores from Cabo Frio, SW Atlantic continental shelf, Brazil, corresponding approximately to the last 700 years. In the Cabo Frio region, a costal upwelling occurs as a quasi-seasonal phenomenon characterized by nutrient-rich bottom waters that intrude on the continental shelf and promote relatively high biological productivity compared to other Brazilian continental shelf areas. The results for sterols indicate the predominance of organic matter (OM) inputs related to marine organisms, mainly plankton, in all of the cores along the time scale studied. Principal component analyses show three different groups of variables, which may be associated with (i) the more effective intrusion of the nutrient-rich South Atlantic Central Water, resulting in the increase of marine lipid biomarkers such as sterols and short-chain n-alkanes; (ii) the influence of the Coastal Water with higher surface water temperature and subsequently lower primary productivity; and (iii) OM characterized by high total organic carbon and long-chain n-alkanes related to an allochthonous source. Relatively high concentrations of sterols and n-alkanes between 1450 and 1700 AD, chronologically associated with the Little Ice Age, suggest a period associated with changes in the local input of specific sources of these compounds. The concentrations of lipid biomarkers vary over core depth, but this does not suggest a notably high or low intensity of upwelling processes. It is possible that the climatic and sea surface temperature changes reported in previous studies did not affect the input of the sedimentary lipid biomarkers analyzed here.

  17. Particle Fluxes and Bulk Geochemical Characterization of the Cabo Frio Upwelling System in Southeastern Brazil: Sediment Trap Experiments between Spring 2010 and Summer 2012.

    Science.gov (United States)

    Albuquerque, Ana Luiza S; Belém, André L; Zuluaga, Francisco J B; Cordeiro, Livia G M; Mendoza, Ursula; Knoppers, Bastiaan A; Gurgel, Marcio H C; Meyers, Philip A; Capilla, Ramsés

    2014-05-14

    Physical and biogeochemical processes in continental shelves act synergistically in both transporting and transforming suspended material, and ocean dynamics control the dispersion of particles by the coastal zone and their subsequent mixing and dilution within the shelf area constrained by oceanic boundary currents, followed by their gradual settling in a complex sedimentary scenario. One of these regions is the Cabo Frio Upwelling System located in a significantly productive area of Southeastern Brazil, under the control of the nutrient-poor western boundary Brazil Current but also with a wind-driven coastal upwelling zone, inducing cold-water intrusions of South Atlantic Central Water on the shelf. To understand these synergic interactions among physical and biogeochemical processes in the Cabo Frio shelf, a series of four experiments with a total of 98 discrete samples using sediment traps was performed from November 2010 to March 2012, located on the 145 m isobath on the edge of the continental shelf. The results showed that lateral transport might be relevant in some cases, especially in deep layers, although no clear seasonal cycle was detected. Two main physical-geochemical coupling scenarios were identified: singular downwelling events that can enhance particles fluxes and are potentially related to the Brazil Current oscillations; and events of significant fluxes related to the intrusion of the 18°C isotherm in the euphotic zone. The particulate matter settling in the Cabo Frio shelf area seems to belong to multiple marine and terrestrial sources, in which both Paraiba do Sul River and Guanabara Bay could be potential land-sources, although the particulate material might subject intense transformation (diagenesis) during its trajectory to the shelf edge.

  18. Statistical mechanics of the $N$-point vortex system with random intensities on $R^2$

    Directory of Open Access Journals (Sweden)

    Cassio Neri

    2005-01-01

    Full Text Available The system of N -point vortices on $mathbb{R}^2$ is considered under the hypothesis that vortex intensities are independent and identically distributed random variables with respect to a law $P$ supported on $(0,1]$. It is shown that, in the limit as $N$ approaches $infty$, the 1-vortex distribution is a minimizer of the free energy functional and is associated to (some solutions of the following non-linear Poisson Equation:$$ -Delta u(x = C^{-1}int_{(0,1]} rhbox{e}^{-eta ru(x- gamma r|x|^2}P(hbox{d}r, quadforall xin mathbb{R}^2, $$where $displaystyle C = int_{(0,1]}int_{mathbb{R}^2}hbox{e}^{-eta ru(y - gamma r|y|^2}hbox{d} yP(hbox{d}r$

  19. Some thermoelectric properties of the light rare earth sesquiselenides (R2Se/sub 3-x/)

    International Nuclear Information System (INIS)

    Takeshita, T.; Beaudry, B.J.; Gschneidner, K.A. Jr.

    1981-01-01

    Rare earth sesquiselenides of the Th 3 P 4 structure show variable electric properties over their homogeneity range, i.e., ranging from metallic (R 3 Se 4 ) to semimetallic (R 2 Se/sub 3-x/, where 0.14 > x > 0) to semiconducting (R 2 Se 3 ). The composition change is due to the formation of metal vacancies in the Th 3 P 4 structure with no vacancies at R 3 Se 4 and 4.75 at. % vacancies at R 2 Se 3 . The rare earth sesquiselenides are also refractory materials and therefore are of interest for high temperature thermoelectric applications. Preliminary results of thermoelectric power and electrical resistivity measurements on the light lanthanide sesquiselenides (La through Sm) are presented

  20. Data Retrieved by ARCADE-R2 Experiment On Board the BEXUS-17 Balloon

    Science.gov (United States)

    Barbetta, M.; Branz, F.; Carron, A.; Olivieri, L.; Prendin, J.; Sansone, F.; Savioli, L.; Spinello, F.; Francesconi, A.

    2015-09-01

    The Autonomous Rendezvous, Control And Docking Experiment — Reflight 2 (ARCADE-R2) is a technology demonstrator aiming to prove automatic attitude determination and control, rendezvous and docking capabilities for small scale spacecraft and aircraft. The development of such capabilities could be fundamental to create, in the near future, fleets of cooperative, autonomous unmanned aerial vehicles for mapping, surveillance, inspection and remote observation of hazardous environments; small-class satellites could also benefit from the employment of docking systems to extend and reconfigure their mission profiles. ARCADE-R2 is designed to test these technologies on a stratospheric flight on board the BEXUS-17 balloon, allowing to demonstrate them in a harsh environment subjected to gusty winds and high pressure and temperature variations. In this paper, ARCADE-R2 architecture is introduced and the main results obtained from a stratospheric balloon flight are presented.

  1. Influenza Seasonal Summary, 2014-2015 Season

    Science.gov (United States)

    2015-08-14

    Influenza Seasonal Summarv 2014-2015 Season EpiData Center Department Communicable Disease Division NMCPHC-EDC-TR-394-2015 REPORT DOCUMENTATION... Influenza Seasonal Summary, 2014-2015 Season Sb. GRANT NUMBER $c. PROGRAM ELEMENT NUMBER 6. AUTHORjS) Sd. PROJECT NUMBER Ashleigh K McCabe, Kristen R...SUPPLEMENTARY NOTES 1<l. ABSTRACT This report summartzes influenza activity among Department of Navy (DON) and Depar1ment of Defense (DOD

  2. R2d2 Drives Selfish Sweeps in the House Mouse.

    Science.gov (United States)

    Didion, John P; Morgan, Andrew P; Yadgary, Liran; Bell, Timothy A; McMullan, Rachel C; Ortiz de Solorzano, Lydia; Britton-Davidian, Janice; Bult, Carol J; Campbell, Karl J; Castiglia, Riccardo; Ching, Yung-Hao; Chunco, Amanda J; Crowley, James J; Chesler, Elissa J; Förster, Daniel W; French, John E; Gabriel, Sofia I; Gatti, Daniel M; Garland, Theodore; Giagia-Athanasopoulou, Eva B; Giménez, Mabel D; Grize, Sofia A; Gündüz, İslam; Holmes, Andrew; Hauffe, Heidi C; Herman, Jeremy S; Holt, James M; Hua, Kunjie; Jolley, Wesley J; Lindholm, Anna K; López-Fuster, María J; Mitsainas, George; da Luz Mathias, Maria; McMillan, Leonard; Ramalhinho, Maria da Graça Morgado; Rehermann, Barbara; Rosshart, Stephan P; Searle, Jeremy B; Shiao, Meng-Shin; Solano, Emanuela; Svenson, Karen L; Thomas-Laemont, Patricia; Threadgill, David W; Ventura, Jacint; Weinstock, George M; Pomp, Daniel; Churchill, Gary A; Pardo-Manuel de Villena, Fernando

    2016-06-01

    A selective sweep is the result of strong positive selection driving newly occurring or standing genetic variants to fixation, and can dramatically alter the pattern and distribution of allelic diversity in a population. Population-level sequencing data have enabled discoveries of selective sweeps associated with genes involved in recent adaptations in many species. In contrast, much debate but little evidence addresses whether "selfish" genes are capable of fixation-thereby leaving signatures identical to classical selective sweeps-despite being neutral or deleterious to organismal fitness. We previously described R2d2, a large copy-number variant that causes nonrandom segregation of mouse Chromosome 2 in females due to meiotic drive. Here we show population-genetic data consistent with a selfish sweep driven by alleles of R2d2 with high copy number (R2d2(HC)) in natural populations. We replicate this finding in multiple closed breeding populations from six outbred backgrounds segregating for R2d2 alleles. We find that R2d2(HC) rapidly increases in frequency, and in most cases becomes fixed in significantly fewer generations than can be explained by genetic drift. R2d2(HC) is also associated with significantly reduced litter sizes in heterozygous mothers, making it a true selfish allele. Our data provide direct evidence of populations actively undergoing selfish sweeps, and demonstrate that meiotic drive can rapidly alter the genomic landscape in favor of mutations with neutral or even negative effects on overall Darwinian fitness. Further study will reveal the incidence of selfish sweeps, and will elucidate the relative contributions of selfish genes, adaptation and genetic drift to evolution. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  3. Simplified prediction of postoperative cardiac surgery outcomes with a novel score: R2CHADS2.

    Science.gov (United States)

    Peguero, Julio G; Lo Presti, Saberio; Issa, Omar; Podesta, Carlos; Parise, Helen; Layka, Ayman; Brenes, Juan C; Lamelas, Joseph; Lamas, Gervasio A

    2016-07-01

    To compare the accuracy of R2CHADS2, CHADS2, and CHA2DS2-VASc scores vs the Society of Thoracic Surgeons (STS) score as predictors of morbidity and mortality after cardiovascular surgery. All patients who underwent cardiothoracic surgery at our institution from January 2008 to July 2013 were analyzed. Only those patients who fulfilled the criteria for STS score calculation were included. The R2CHADS2 score was computed as follows: 2 points for GFR < 60 mL/min/1.73 m(2) (R2), prior stroke or TIA (S2); 1 point for history of congestive heart failure (C), hypertension (H), age ≥75 years (A), or diabetes (D). Area under the curve (AUC) analysis was used to estimate the accuracy of the different scores. The end point variables included operative mortality, permanent stroke, and renal failure as defined by the STS database system. Of the 3,492 patients screened, 2,263 met the inclusion criteria. These included 1,160 (51%) isolated valve surgery, 859 (38%) coronary artery bypass graft surgery, and 245 (11%) combined procedures. There were 147 postoperative events: 75 (3%) patients had postoperative renal failure, 48 (2%) had operative mortality, and 24 (1%) had permanent stroke. AUC analysis revealed that STS, R2CHADS2, CHADS2, and CHA2DS2-VASc reliably estimated all postoperative outcomes. STS and R2CHADS2 scores had the best accuracy overall, with no significant difference in AUC values between them. The R2CHADS2 score estimates postoperative events with acceptable accuracy and if further validated may be used as a simple preoperative risk tool calculator. Copyright © 2016 Elsevier Inc. All rights reserved.

  4. MiR-2 family regulates insect metamorphosis by controlling the juvenile hormone signaling pathway.

    Science.gov (United States)

    Lozano, Jesus; Montañez, Raúl; Belles, Xavier

    2015-03-24

    In 2009 we reported that depletion of Dicer-1, the enzyme that catalyzes the final step of miRNA biosynthesis, prevents metamorphosis in Blattella germanica. However, the precise regulatory roles of miRNAs in the process have remained elusive. In the present work, we have observed that Dicer-1 depletion results in an increase of mRNA levels of Krüppel homolog 1 (Kr-h1), a juvenile hormone-dependent transcription factor that represses metamorphosis, and that depletion of Kr-h1 expression in Dicer-1 knockdown individuals rescues metamorphosis. We have also found that the 3'UTR of Kr-h1 mRNA contains a functional binding site for miR-2 family miRNAs (for miR-2, miR-13a, and miR-13b). These data suggest that metamorphosis impairment caused by Dicer-1 and miRNA depletion is due to a deregulation of Kr-h1 expression and that this deregulation is derived from a deficiency of miR-2 miRNAs. We corroborated this by treating the last nymphal instar of B. germanica with an miR-2 inhibitor, which impaired metamorphosis, and by treating Dicer-1-depleted individuals with an miR-2 mimic to allow nymphal-to-adult metamorphosis to proceed. Taken together, the data indicate that miR-2 miRNAs scavenge Kr-h1 transcripts when the transition from nymph to adult should be taking place, thus crucially contributing to the correct culmination of metamorphosis.

  5. Seasonality, mobility, and livability.

    Science.gov (United States)

    2012-01-31

    Signature project 4a, Seasonality, Mobility, and Livability investigated the effects of weather, season, built environment, community amenities, attitudes, and demographics on mobility and quality of life (QOL). A four season panel survey exami...

  6. Rolling Deck to Repository (R2R): Standards and Semantics for Open Access to Research Data

    Science.gov (United States)

    Arko, Robert; Carbotte, Suzanne; Chandler, Cynthia; Smith, Shawn; Stocks, Karen

    2015-04-01

    In recent years, a growing number of funding agencies and professional societies have issued policies calling for open access to research data. The Rolling Deck to Repository (R2R) program is working to ensure open access to the environmental sensor data routinely acquired by the U.S. academic research fleet. Currently 25 vessels deliver 7 terabytes of data to R2R each year, acquired from a suite of geophysical, oceanographic, meteorological, and navigational sensors on over 400 cruises worldwide. R2R is working to ensure these data are preserved in trusted repositories, discoverable via standard protocols, and adequately documented for reuse. R2R maintains a master catalog of cruises for the U.S. academic research fleet, currently holding essential documentation for over 3,800 expeditions including vessel and cruise identifiers, start/end dates and ports, project titles and funding awards, science parties, dataset inventories with instrument types and file formats, data quality assessments, and links to related content at other repositories. A Digital Object Identifier (DOI) is published for 1) each cruise, 2) each original field sensor dataset, 3) each post-field data product such as quality-controlled shiptrack navigation produced by the R2R program, and 4) each document such as a cruise report submitted by the science party. Scientists are linked to personal identifiers, such as the Open Researcher and Contributor ID (ORCID), where known. Using standard global identifiers such as DOIs and ORCIDs facilitates linking with journal publications and generation of citation metrics. Since its inception, the R2R program has worked in close collaboration with other data repositories in the development of shared semantics for oceanographic research. The R2R cruise catalog uses community-standard terms and definitions hosted by the NERC Vocabulary Server, and publishes ISO metadata records for each cruise that use community-standard profiles developed with the NOAA Data

  7. Pro EDI in BizTalk Server 2006 R2 electronic document interchange solutions

    CERN Document Server

    Beckner, Mark

    2008-01-01

    As business becomes more dependent on working with partners, suppliers, and other organizations in a streamlined way, Electronic Data Interchange (EDI) is one of the next big waves in connected systems. Microsoft BizTalk Server 2006 R2 offers an efficient, integrated way to deploy EDI solutions, and with the help of this book, readers will see how EDI can be used in their business and how best to get it set up with BizTalk. This book offers insights into the brand-new Biztalk 2006 R2--based EDI functionality, including the far greater flexibility in handling interchange. It gives advice coveri

  8. MCSA Windows Server 2012 R2 configuring advanced services study guide exam 70-412

    CERN Document Server

    Panek, William

    2015-01-01

    The bestselling MCSA study guide, with expert instruction andhands-on practice MCSA Windows Server 2012 R2 Configuring Advanced ServicesStudy Guide provides focused preparation for exam 70-412 and isfully updated to align with the latest Windows Server 2012 R2objectives. This comprehensive guide covers 100 percent of all examobjective domains, and includes hundreds of practice questions andanswers. You get access to video demonstrations, electronicflashcards, and practice exams, and hands-on exercises based onreal-world scenarios allow you to apply your skills to everydaytasks. Organized by o

  9. Curved fronts in the Belousov-Zhabotinskii reaction-diffusion systems in R2

    Science.gov (United States)

    Niu, Hong-Tao; Wang, Zhi-Cheng; Bu, Zhen-Hui

    2018-05-01

    In this paper we consider a diffusion system with the Belousov-Zhabotinskii (BZ for short) chemical reaction. Following Brazhnik and Tyson [4] and Pérez-Muñuzuri et al. [45], who predicted V-shaped fronts theoretically and discovered V-shaped fronts by experiments respectively, we give a rigorous mathematical proof of their results. We establish the existence of V-shaped traveling fronts in R2 by constructing a proper supersolution and a subsolution. Furthermore, we establish the stability of the V-shaped front in R2.

  10. Microsoft® Office Communications Server 2007 R2 Resource Kit

    CERN Document Server

    Maximo, Rui; Ramanathan, Rajesh; Kamdar, Nirav

    2009-01-01

    In-depth, comprehensive, and fully revised for R2-this RESOURCE KIT delivers the information you need to deploy, manage, and troubleshoot Microsoft Office Communications Server 2007 R2. Get technical insights, scenarios, and best practices from those who know the technology best-the engineers who designed and developed it-along with 90+ Windows PowerShell™ scripts, bonus references, and other essential resources on CD. Get expert advice on how to: Plan server roles, infrastructure, topology, and securityDesign and manage enterprise instant messaging (IM), presence, and conferencing solutio

  11. Oracle Data Guard 11gR2 administration beginner's guide

    CERN Document Server

    Baransel, Emre

    2013-01-01

    Using real-world examples and hands-on tasks, Oracle Data Guard 11gR2 Administration Beginner's Guide will give you a solid foundation in Oracle Data Guard. It has been designed to teach you everything you need to know to successfully create and operate Data Guard environments with maximum flexibility, compatibility, and effectiveness.If you are an Oracle database administrator who wants to configure and administer Data Guard configurations, then ""Oracle Data Guard 11gR2 Administration Beginner's Guide"" is for you. With a basic understanding of Oracle database administration, you'll be able

  12. Thermal expansion and spontaneous magnetostriction of R2Co7 intermetallic compounds

    International Nuclear Information System (INIS)

    Andreev, A.V.; Bartashevich, M.I.; Deryagin, A.V.; Zadvorkin, S.M.; Tarasov, E.N.

    1988-01-01

    Thermal expansion of R 2 Co 7 (R=Y, Nd, Gd, Tb) single crystals was invesigated by the method of X-ray dilatometry. Anomalous of thermal expansion, taking place during magnetic ordering and spin reorientation were used to determine linear and volumetric magnetistriction deformations. Constants of anisotropic magnetostriction of all R 2 Co 7 compounds with nonzero orbital moment of rare earth ion were calculated on the basis of single-ion model according to deformation values and with account of temperature dependences of the magnitude and direction of magnetic moment

  13. Seasonal varability of the Canary Current

    Science.gov (United States)

    Vélez-Belchí, P.; Hernandez-Guerra, A.; Pérez-Hernández, M. D.

    2016-02-01

    The Atlantic meridional overturning circulation (AMOC) is recognized as an important component of the climate system, contributing to the relatively mild climate of northwest Europe. Due to its importance, the strength of the AMOC is continually monitored along 26ºN with several moorings, east of the Bahamas, in the Middle Atlantic Ridge and south of the Canary islands, known as the RAPID array. The measurements of the RAPID array show a 6 Sv seasonal cycle for the AMOC, and recent studies have pointed out the dynamics of the eastern Atlantic as the main driver for this seasonal cycle, specifically, rossby waves excited south of the Canary Islands.Due to the important role of the eastern Atlantic, in this study we describe the seasonal cycle of the Canary Current (CC) and the Canary Upwelling Current (CUC), using hydrographic data from two cruises carried out in a box around the Canary Islands, the region where the eastern component of the RAPID array is placed. CTD, VMADCP and LADCP data were combined with inverse modeling in order to determine absolute geostrophic transports in the Canary Islands region in fall and spring. During spring, the overall transport of Canary Current and the CUC was southward. In the Lanzarote Passage (LP), between the Canary Islands and Africa, the CUC transported 0.6±0.20 Sv southward, while the Canary Current transported 1.0±0.40 Sv in the oceanic waters of the Canary Islands Archipelago. During fall, the CUC transported 2.8±0.4Sv northward, while the CC transported 2.9±0.60 Sv southward in the oceanic waters of the Canary Islands Archipelago. The seasonal cycle observed has and amplitude of 3.4Sv for the CUC and 1.9Sv for the CC. Data from a mooring in the LP and the hydrographic data was used to calibrate geostrophic transport estimated using altimetry data. The amplitude of the seasonal cycle of the geostrophic transport obtained using the calibrated altimetry data (Figure 1) was quite similar to the seasonal cycle of the

  14. Seasonal cycle of the Canary Current.

    Science.gov (United States)

    Vélez-Belchí, P.; Hernandez-Guerra, A.; Pérez-Hernández, M. D.

    2015-12-01

    The Atlantic meridional overturning circulation (AMOC) is recognized as an important component of the climate system, contributing to the relatively mild climate of northwest Europe. Due to its importance, the strength of the AMOC is continually monitored along 26ºN with several moorings east of the Bahamas, in the Middle Atlantic Ridge and south of the Canary islands, known as the RAPID array. The measurements of the RAPID array show a 6 Sv seasonal cycle for the AMOC, and recent studies have pointed out the dynamics of the eastern Atlantic as the main driver for this seasonal cycle, specifically, rossby waves excited south of the Canary Islands. Due to the important role of the eastern Atlantic, in this study we describe the seasonal cycle of the Canary Current (CC) and the Canary Upwelling Current (CUC) using hydrographic data from two cruises carried out in a box around the Canary Islands, the region where the eastern component of the RAPID array is placed. CTD, VMADCP and LADCP data were combined with inverse modeling in order to determine absolute geostrophic transports in the Canary Islands region in fall and spring. During spring, the overall transport of Canary Current and the CUC was southward. In the Lanzarote Passage (LP), between the Canary Islands and Africa, the CUC transported 0.6±0.20 Sv southward, while the Canary Current transported 1.0±0.40 Sv in the oceanic waters of the Canary Islands Archipelago. During fall, the CUC transported 2.8±0.4Sv northward, while the CC transported 2.9±0.60 Sv southward in the oceanic waters of the Canary Islands Archipelago. The seasonal cycle observed has an amplitude of 3.4Sv for the CUC and 1.9Sv for the CC. Data from a mooring in the LP and the hydrographic data was used to calibrate geostrophic transport estimated using altimetry data. The amplitude of the seasonal cycle of the geostrophic transport obtained using the calibrated altimetry data (Figure 1) was quite similar to the seasonal cycle of the

  15. Variability of the western Galician upwelling system (NW Spain) during an intensively sampled annual cycle. An EOF analysis approach

    Science.gov (United States)

    Herrera, J. L.; Rosón, G.; Varela, R. A.; Piedracoba, S.

    2008-07-01

    The key features of the western Galician shelf hydrography and dynamics are analyzed on a solid statistical and experimental basis. The results allowed us to gather together information dispersed in previous oceanographic works of the region. Empirical orthogonal functions analysis and a canonical correlation analysis were applied to a high-resolution dataset collected from 47 surveys done on a weekly frequency from May 2001 to May 2002. The main results of these analyses are summarized bellow. Salinity, temperature and the meridional component of the residual current are correlated with the relevant local forcings (the meridional coastal wind component and the continental run-off) and with a remote forcing (the meridional temperature gradient at latitude 37°N). About 80% of the salinity and temperature total variability over the shelf, and 37% of the residual meridional current total variability are explained by two EOFs for each variable. Up to 22% of the temperature total variability and 14% of the residual meridional current total variability is devoted to the set up of cross-shore gradients of the thermohaline properties caused by the wind-induced Ekman transport. Up to 11% and 10%, respectively, is related to the variability of the meridional temperature gradient at the Western Iberian Winter Front. About 30% of the temperature total variability can be explained by the development and erosion of the seasonal thermocline and by the seasonal variability of the thermohaline properties of the central waters. This thermocline presented unexpected low salinity values due to the trapping during spring and summer of the high continental inputs from the River Miño recorded in 2001. The low salinity plumes can be traced on the Galician shelf during almost all the annual cycle; they tend to be extended throughout the entire water column under downwelling conditions and concentrate in the surface layer when upwelling favourable winds blow. Our evidences point to the

  16. The role of open ocean boundary forcing on seasonal to decadal-scale variability and long-term change of natural shelf hypoxia

    International Nuclear Information System (INIS)

    Monteiro, Pedro M S; Dewitte, Boris; Paulmier, Aurelien; Scranton, Mary I; Van der Plas, Anja K

    2011-01-01

    In this study we investigate the possible reasons for the widespread differences between the seasonal cycles of carbon production and export compared to those of hypoxia in eastern boundary upwelling systems. An idealized model is proposed that qualitatively characterizes the relative roles of physics and biogeochemical fluxes. The model is tested on three contrasting upwelling systems: the Benguela (from relatively aerated to interannual anoxic), the Humboldt (sub-oxic and interannually anoxic) and the Cariaco (permanently anoxic). Overall we propose that shelf hypoxia variability can be explained on the basis of the interaction between ventilation by ocean boundary forcing through ocean-shelf exchange and the role of shelf geometry in the retention of shelf-based particulate organic carbon (POC) fluxes. We aim to identify the hypoxia regimes associated with low ventilation-wide-shelf systems and high ventilation-narrow-shelf systems, considering them as extremes of conditions controlled by the two factors. We propose that this may help to explain differences in the seasonal cycles of the biogeochemical drivers and responses as well as difference between upwelling systems and within individual upwelling systems. It is suggested that when seasonal hypoxia emerges it does so preferentially at a wide-shelf part of a system.

  17. Genetic inhibition of PKA phosphorylation of RyR2 prevents dystrophic cardiomyopathy

    NARCIS (Netherlands)

    Sarma, Satyam; Li, Na; van Oort, Ralph J.; Reynolds, Corey; Skapura, Darlene G.; Wehrens, Xander H. T.

    2010-01-01

    Aberrant intracellular Ca(2+) regulation is believed to contribute to the development of cardiomyopathy in Duchenne muscular dystrophy. Here, we tested whether inhibition of protein kinase A (PKA) phosphorylation of ryanodine receptor type 2 (RyR2) prevents dystrophic cardiomyopathy by reducing SR

  18. Genome-wide identification and characterization of R2R3MYB family in Rosaceae.

    Science.gov (United States)

    González, Máximo; Carrasco, Basilio; Salazar, Erika

    2016-09-01

    Transcription factors R2R3MYB family have been associated with the control of secondary metabolites, development of structures, cold tolerance and response to biotic and abiotic stress, among others. In recent years, genomes of Rosaceae botanical family are available. Although this information has been used to study the karyotype evolution of these species from an ancestral genome, there are no studies that treat the evolution and diversity of gene families present in these species or in the botanical family. Here we present the first comparative study of the R2R3MYB subfamily of transcription factors in three species of Rosaceae family (Malus domestica, Prunus persica and Fragaria vesca). We described 186, 98 and 86 non-redundant gene models for apple, peach and strawberry, respectively. In this research, we analyzed the intron-exon structure and genomic distribution of R2R3MYB families mentioned above. The phylogenetic comparisons revealed putative functions of some R2R3MYB transcription factors. This analysis found 44 functional subgroups, seven of which were unique for Rosaceae. In addition, our results showed a highly collinearity among some genes revealing the existence of conserved gene models between the three species studied. Although some gene models in these species have been validated under several approaches, more research in the Rosaceae family is necessary to determine gene expression patterns in specific tissues and development stages to facilitate understanding of the regulatory and biochemical mechanism in this botanical family.

  19. Convex Bodies With Minimal Volume Product in R^2 --- A New Proof

    OpenAIRE

    Lin, Youjiang

    2010-01-01

    In this paper, a new proof of the following result is given: The product of the volumes of an origin symmetric convex bodies $K$ in R^2 and of its polar body is minimal if and only if $K$ is a parallelogram.

  20. R2/R0-WTR decommissioning cost. Comparison and benchmarking analysis

    International Nuclear Information System (INIS)

    Varley, Geoff; Rusch, Chris

    2001-10-01

    SKI charged NAC International with the task of determining whether or not the decommissioning cost estimates of R2/R0 (hereafter simply referred to as R2) and Aagesta research reactors are reasonable. The associated work was performed in two phases. The objective in Phase I was to make global comparisons of the R2 and Aagesta decommissioning estimates with the estimates/actual costs for the decommissioning of similar research reactors in other countries. This report presents the results of the Phase II investigations. Phase II focused on selected discrete work packages within the decommissioning program of the WTR reactor. To the extent possible a comparison of those tasks with estimates for the R2 reactor has been made, as a basis for providing an opinion on the reasonableness of the R2 estimate. The specific WTR packages include: reactor vessel and internals dismantling; biological shield dismantling; primary coolant piping dismantling; electrical equipment removal; waste packaging; transportation and disposal of radioactive concrete and reactor components; project management, licensing and engineering; and removal of ancillary facilities. The specific tasks were characterised and analysed in terms of fundamental parameters including: task definition; labour hours expended; labour cost; labour productivity; length of work week; working efficiency; working environment and impact on job execution; external costs (contract labour, materials and equipment); total cost; waste volumes; and waste packaging and transport costs. Based on such detailed raw data, normalised unit resources have been derived for selected parts of the decommissioning program, as a first step towards developing benchmarking data for D and D activities at research reactors. Several general conclusions emerged from the WTR decommissioning project. Site characterisation can confirm or negate major assumptions, quantify waste volumes, delineate obstacles to completing work, provide an understanding

  1. Substrate recognition and function of the R2TP complex in response to cellular stress

    Czech Academy of Sciences Publication Activity Database

    von Morgen, Patrick; Hořejší, Zuzana; Macůrek, Libor

    2015-01-01

    Roč. 6, February 2015 (2015) ISSN 1664-8021 R&D Projects: GA ČR(CZ) GA14-34264S; GA MŠk LO1220 Institutional support: RVO:68378050 Keywords : R2TPcomplex * proteinfolding * DNAdamageresponse Subject RIV: EB - Genetics ; Molecular Biology

  2. Chiral recognition in electron scattering by S- and R-2-butanol

    DEFF Research Database (Denmark)

    Jones, Nykola C.; Hoffmann, Søren Vrønning; Field, David

    2015-01-01

    Experiments are described involving the low energy scattering of electrons from the two optical enantiomers S- and R- 2-butanol. Using a synchrotron radiation photoionization source on the ASTRID storage ring, scattering spectra are reported between a few meV and 140 meV at an electron energy...

  3. (2S,4R-2-[(1R-1-(4-Bromophenyl-2-nitroethyl]-4-ethylcyclohexanone

    Directory of Open Access Journals (Sweden)

    Chi-Xiao Zhang

    2013-02-01

    Full Text Available The crystal structure of the title compound, C16H20BrNO3, contains three chiral centers in the configuration 1R,2S,6R. The cyclohexane ring is in a chair conformation. In the crystal, molecules are linked by weak C—H...O interactions, forming chains along the a-axis direction.

  4. Mapping HL7 CDA R2 Formatted Mass Screening Data to OpenEHR Archetypes.

    Science.gov (United States)

    Kobayashi, Shinji; Kume, Naoto; Yoshihara, Hiroyuki

    2017-01-01

    Mass screening of adults was performed to manage employee healthcare. The screening service defined the data collection format as HL7 Clinical Document Architecture (CDA) R2. To capture mass screening data for nationwide electronic health records (her), we programmed a model within the CDA format and mapped the data items to the ISO13606/openEHR archetype for semantic interoperabiilty.

  5. Herschel/HIFI observations of CO, H2O and NH3 in Monoceros R2

    NARCIS (Netherlands)

    Pilleri, P.; Fuente, A.; Cernicharo, J.; Ossenkopf, V.; Berne, O.; Gerin, M.; Pety, J.; Goicoechea, J. R.; Rizzo, J. R.; Montillaud, J.; Gonzalez-Garcia, M.; Joblin, C.; Le Bourlot, J.; Le Petit, F.; Kramer, C.

    Context. Mon R2, at a distance of 830 pc, is the only ultracompact H II region (UCH II) where the associated photon-dominated region (PDR) can be resolved with Herschel. Owing to its brightness and proximity, it is one of the best-suited sources for investigating the chemistry and physics of highly

  6. Abrasion Testing of Products Containing Nanomaterials, SOP-R-2: Scientific Operating Procedure Series: Release (R)

    Science.gov (United States)

    2016-04-01

    Nanotechnologies -- Terminology and definitions for nano-objects -- Nanoparticle, nanofibre and nanoplate Definitions Abrasion - wearing away...ER D C SR -1 6- 2 Environmental Consequences of Nanotechnologies Abrasion Testing of Products Containing Nanomaterials, SOP-R-2...ERDC online library at http://acwc.sdp.sirsi.net/client/default. Environmental Consequences of Nanotechnologies ERDC SR-16-2 April 2016

  7. Synthesis and steriostructure of 5-(5-R-2- furfur lidene)- barbituric acid

    International Nuclear Information System (INIS)

    Abdel-Wahab, A.

    2012-01-01

    Heterocyclic compounds 5-(5-R-2-furfur lidene)- barbituric acid were obtained and their physical and chemical properties were studied. Their structures were identified by spectroscopic methods. This study proved by 1 H-NMR Spectroscopy data that these compounds exist in S-cis form. (author)

  8. The nature of hydrogen bonding in R-2(2)(8) crystal motifs - a computational exploration

    Czech Academy of Sciences Publication Activity Database

    Deepa, Palanisamy; Solomon, R. V.; Vedha, S. A.; Kolandaivel, P.; Venuvanalingam, P.

    2014-01-01

    Roč. 112, č. 24 (2014), s. 3195-3205 ISSN 0026-8976 Institutional support: RVO:61388963 Keywords : NCI plot * hydrogen bonds * R-2(2)(8) motif * organic crystals * NBO * QTAIM analysis Subject RIV: CF - Physical ; Theoretical Chemistry Impact factor: 1.720, year: 2014

  9. Instant migration from Windows Server 2008 and 2008 R2 to 2012 how-to

    CERN Document Server

    Sivarajan, Santhosh

    2013-01-01

    Presented in a hands-on reference manual style, with real-world scenarios to lead you through each process. This book is intended for Windows server administrators who are performing migrations from their existing Windows Server 2008 / 2008 R2 environment to Windows Server 2012. The reader must be familiar with Windows Server 2008.

  10. R2R Eventlogger: Community-wide Recording of Oceanographic Cruise Science Events

    Science.gov (United States)

    Maffei, A. R.; Chandler, C. L.; Stolp, L.; Lerner, S.; Avery, J.; Thiel, T.

    2012-12-01

    Methods used by researchers to track science events during a science research cruise - and to note when and where these occur - varies widely. Handwritten notebooks, printed forms, watch-keeper logbooks, data-logging software, and customized software have all been employed. The quality of scientific results is affected by the consistency and care with which such events are recorded and integration of multi-cruise results is hampered because recording methods vary widely from cruise to cruise. The Rolling Deck to Repository (R2R) program has developed an Eventlogger system that will eventually be deployed on most vessels in the academic research fleet. It is based on the open software package called ELOG (http://midas.psi.ch/elog/) originally authored by Stefan Ritt and enhanced by our team. Lessons have been learned in its development and use on several research cruises. We have worked hard to find approaches that encourage cruise participants to use tools like the eventlogger. We examine these lessons and several eventlogger datasets from past cruises. We further describe how the R2R Science Eventlogger works in concert with the other R2R program elements to help coordinate research vessels into a coordinated mobile observing fleet. Making use of data collected on different research cruises is enabled by adopting common ways of describing science events, the science instruments employed, the data collected, etc. The use of controlled vocabularies and the practice of mapping these local vocabularies to accepted oceanographic community vocabularies helps to bind shipboard research events from different cruises into a more cohesive set of fleet-wide events that can be queried and examined in a cross-cruise manner. Examples of the use of the eventlogger during multi-cruise oceanographic research programs along with examples of resultant eventlogger data will be presented. Additionally we will highlight the importance of vocabulary use strategies to the success of the

  11. Decreased placental and maternal serum TRAIL-R2 levels are associated with placenta accreta.

    Science.gov (United States)

    Oztas, Efser; Ozler, Sibel; Ersoy, Ali Ozgur; Ersoy, Ebru; Caglar, Ali Turhan; Uygur, Dilek; Yucel, Aykan; Ergin, Merve; Danisman, Nuri

    2016-03-01

    TNF-related apoptosis-inducing ligand receptor-2 (TRAIL-R2) is produced both by decidual and trophoblast cells during pregnancy and known to participate in apoptosis. In this study, we aimed to determine and to compare maternal serum and placental TRAIL-R2 levels in patients with placenta accreta, non-adherent placenta previa and in healthy pregnancies. We also aimed to analyze the association of placenta accreta with the occurrence of previous C-sections. A total of 82 pregnant women were enrolled in this case-control study (27 placenta accreta patients, 26 non-adherent placenta previa patients and 29 age-, and BMI-matched healthy, uncomplicated pregnant controls). TRAIL-R2 levels were studied in both maternal serum and placental tissue homogenates. Determining the best predictor(s) which discriminate placenta accreta was analyzed by multiple logistic regression analyses. Adjusted odds ratios and 95% confidence intervals were also calculated. Both placental and serum TRAIL-R2 levels were significantly lower in placenta accreta group (median 34.82 pg/mg and 19.85 pg/mL, respectively) when compared with both non-adherent placenta previa (median 39.24 pg/mg and 25.99 pg/mL, respectively) and the control groups (median 41.62 pg/mg and 25.87 pg/mL, respectively) (p Placental TRAIL-R2 levels and previous cesarean section were found to be significantly associated with placenta accreta (OR: 0.934 95% CI 0.883-0.987, p = 0.016 and OR:7.725 95% CI: 2.717-21.965, p Placental and serum TRAIL-R2 levels were positively correlated. Decreased levels of placental TRAIL-R2 and previous history of cesarean section were found to be significantly associated with placenta accreta, suggesting a possible role of apoptosis in abnormal trophoblast invasion. Copyright © 2016 Elsevier Ltd. All rights reserved.

  12. Interleaved quantitative BOLD: Combining extravascular R2' - and intravascular R2-measurements for estimation of deoxygenated blood volume and hemoglobin oxygen saturation.

    Science.gov (United States)

    Lee, Hyunyeol; Englund, Erin K; Wehrli, Felix W

    2018-03-23

    Quantitative BOLD (qBOLD), a non-invasive MRI method for assessment of hemodynamic and metabolic properties of the brain in the baseline state, provides spatial maps of deoxygenated blood volume fraction (DBV) and hemoglobin oxygen saturation (HbO 2 ) by means of an analytical model for the temporal evolution of free-induction-decay signals in the extravascular compartment. However, mutual coupling between DBV and HbO 2 in the signal model results in considerable estimation uncertainty precluding achievement of a unique set of solutions. To address this problem, we developed an interleaved qBOLD method (iqBOLD) that combines extravascular R 2 ' and intravascular R 2 mapping techniques so as to obtain prior knowledge for the two unknown parameters. To achieve these goals, asymmetric spin echo and velocity-selective spin-labeling (VSSL) modules were interleaved in a single pulse sequence. Prior to VSSL, arterial blood and CSF signals were suppressed to produce reliable estimates for cerebral venous blood volume fraction (CBV v ) as well as venous blood R 2 (to yield HbO 2 ). Parameter maps derived from the VSSL module were employed to initialize DBV and HbO 2 in the qBOLD processing. Numerical simulations and in vivo experiments at 3 T were performed to evaluate the performance of iqBOLD in comparison to the parent qBOLD method. Data obtained in eight healthy subjects yielded plausible values averaging 60.1 ± 3.3% for HbO 2 and 3.1 ± 0.5 and 2.0 ± 0.4% for DBV in gray and white matter, respectively. Furthermore, the results show that prior estimates of CBV v and HbO 2 from the VSSL component enhance the solution stability in the qBOLD processing, and thus suggest the feasibility of iqBOLD as a promising alternative to the conventional technique for quantifying neurometabolic parameters. Copyright © 2018. Published by Elsevier Inc.

  13. Voltage-dependent modulation of cardiac ryanodine receptors (RyR2 by protamine.

    Directory of Open Access Journals (Sweden)

    Paula L Diaz-Sylvester

    Full Text Available It has been reported that protamine (>10 microg/ml blocks single skeletal RyR1 channels and inhibits RyR1-mediated Ca2+ release from sarcoplasmic reticulum microsomes. We extended these studies to cardiac RyR2 reconstituted into planar lipid bilayers. We found that protamine (0.02-20 microg/ml added to the cytosolic surface of fully activated RyR2 affected channel activity in a voltage-dependent manner. At membrane voltage (V(m; SR lumen-cytosol = 0 mV, protamine induced conductance transitions to several intermediate states (substates as well as full block of RyR2. At V(m>10 mV, the substate with the highest level of conductance was predominant. Increasing V(m from 0 to +80 mV, decreased the number of transitions and residence of the channel in this substate. The drop in current amplitude (full opening to substate had the same magnitude at 0 and +80 mV despite the approximately 3-fold increase in amplitude of the full opening. This is more similar to rectification of channel conductance induced by other polycations than to the action of selective conductance modifiers (ryanoids, imperatoxin. A distinctive effect of protamine (which might be shared with polylysines and histones but not with non-peptidic polycations is the activation of RyR2 in the presence of nanomolar cytosolic Ca2+ and millimolar Mg2+ levels. Our results suggest that RyRs would be subject to dual modulation (activation and block by polycationic domains of neighboring proteins via electrostatic interactions. Understanding these interactions could be important as such anomalies may be associated with the increased RyR2-mediated Ca2+ leak observed in cardiac diseases.

  14. A NEW RADIO RECOMBINATION LINE MASER OBJECT TOWARD THE MonR2 H II REGION

    Energy Technology Data Exchange (ETDEWEB)

    Jimenez-Serra, I.; Zhang, Q.; Dierickx, M.; Patel, N. [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, Cambridge, MA 02138 (United States); Baez-Rubio, A.; Rivilla, V. M.; Martin-Pintado, J., E-mail: ijimenez-serra@cfa.harvard.edu, E-mail: qzhang@cfa.harvard.edu, E-mail: mdierickx@cfa.harvard.edu, E-mail: npatel@cfa.harvard.edu, E-mail: ryvendel@gmail.com, E-mail: jmartin@cab.inta-csic.es, E-mail: baezra@cab.inta-csic.es [Centro de Astrobiologia (CSIC/INTA), Ctra. de Torrejon a Ajalvir km 4, E-28850 Torrejon de Ardoz, Madrid (Spain)

    2013-02-10

    We report the detection of a new radio recombination line (RRL) maser object toward the IRS2 source in the MonR2 ultracompact H II region. The continuum emission at 1.3 mm and 0.85 mm and the H30{alpha} and H26{alpha} lines were observed with the Submillimeter Array (SMA) at angular resolutions of {approx}0.''5-3''. The SMA observations show that the MonR2-IRS2 source is very compact and remains unresolved at spatial scales {<=}400 AU. Its continuum power spectrum at millimeter wavelengths is almost flat ({alpha} = -0.16, with S{sub {nu}}{proportional_to}{nu}{sup {alpha}}), indicating that this source is dominated by optically thin free-free emission. The H30{alpha} and H26{alpha} RRL emission is also compact and peaks toward the position of the MonR2-IRS2 source. The measured RRL profiles are double peaked with the H26{alpha} line showing a clear asymmetry in its spectrum. Since the derived line-to-continuum flux ratios ({approx}80 and 180 km s{sup -1} for H30{alpha} and H26{alpha}, respectively) exceed the LTE predictions, the RRLs toward MonR2-IRS2 are affected by maser amplification. The amplification factors are, however, smaller than those found toward the emission-line star MWC349A, indicating that MonR2-IRS2 is a weakly amplified maser. Radiative transfer modeling of the RRL emission toward this source shows that the RRL masers arise from a dense and collimated jet embedded in a cylindrical ionized wind, oriented nearly along the direction of the line of sight. High-angular resolution observations at submillimeter wavelengths are needed to unveil weakly amplified RRL masers in very young massive stars.

  15. Decommissioning of the Nuclear Reactors R2 and R2-0 at Studsvik, Sweden. General Data as called for under Article 37 of the Euratom Treaty

    International Nuclear Information System (INIS)

    2009-01-01

    This document describes the plans for decommissioning of the nuclear research and material test reactors R2 and R2-0, situated at the Studsvik site close to the city of Nykoeping, Sweden. The purpose of the document is to serve as information for the European Commission, and to fulfil the requirements of Article 37 of the Euratom Treaty. Studsvik is situated on the Baltic coast, about 20 km east of Nykoeping and 80 km southwest of Stockholm. The site comprises the reactors R2 and R2-0 and several facilities for material investigation and radioactive waste treatment and storage. The reactors were used for a number of different purposes from 1960 until June 2005, when they were shut down following a decision by the operator. Decommissioning of the reactor facility is planned to be completed in 2016 after dismantling and conditioning of radioactive parts and demolition of the facility. Solid and liquid radioactive wastes from the dismantling activities will be treated and stored on-site awaiting final disposal. The waste treatment facilities, which are situated in other buildings at the Studsvik site, are planned to continue operation during and after the decommissioning of the reactor facility. All nuclear fuel has been transferred to a separate storage facility and is being shipped to the US according to existing agreements. The objective of the planned dismantling activities is to achieve clearance of the facility to make it possible to either demolish the buildings or use them for other purposes. The operator has divided the planning for dismantling and demolition of the facility into three phases [1]: Dismantling 1, including primary system decontamination, dismantling of the reactors with systems in the reactor pool, draining, cleaning and temporary covering of the reactor pool. This phase has begun and is due to last till approximately December 2009. Dismantling 2, including dismantling of systems in the reactor facility, removal of equipment, radiological

  16. Radiolarian Indices of Paleoproductivity Variation in the late Pleistocene Benguela Upwelling System, ODP Site 1084

    Science.gov (United States)

    Bittniok, B. B.; Lazarus, D. B.; Diester-Haass, L.; Billups, K.; Meyers, P.

    2006-12-01

    Changes in export productivity play a significant role in ocean carbon budgets and global climate change. Proxies for export productivity can be difficult to interpret: benthic foraminifera accumulation rates (BFAR) can be affected by carbonate dissolution in organic-carbon rich sediments; bulk opal can be affected by silica limitation of source waters. Recent work (Lazarus et al. 2006; Mar. Micropal.) has shown that a new index based on radiolarian faunal changes (WADE ratio) correlates well to total organic carbon (TOC) values from the same samples over the long term (latest Miocene-Recent) history of productivity in the Benguela Upwelling System (BUS). We present new data on variation in export productivity proxies (WADE, TOC, carbonate, radiolarian opal, BFAR) for the last glacial-interglacial cycle from ODP Site 1084, located just offshore from the main coastal upwelling cells of the BUS. Our age model, from mean Quaternary sedimentation rates (Leg 175 Scientific Results), is in accordance with cyclic variation in other climate sensitive parameters (carbonate and color reflectance). Although opal content and radiolarian preservation is only moderate in our samples, WADE values vary significantly and suggest higher productivity during the last glacial, in accordance with current interpretations of BUS history. Radiolarian opal accumulation is also higher during the last glacial, suggesting that silica limitation (opal paradox) conditions did not dominate over this time period. Similar results for bulk opal have been reported from late Quaternary piston cores from the more northerly Congo upwelling region (Schneider et al, 1997; Paleoc.). We conclude that WADE ratios are a useful proxy for late Pleistocene productivity in the BUS at glacial- interglacial time scales.

  17. Phytoplankton stimulation in frontal regions of Benguela upwelling filaments by internal factors

    Directory of Open Access Journals (Sweden)

    Norbert Wasmund

    2016-11-01

    Full Text Available Filaments are intrusions of upwelling water into the sea, separated from the surrounding water by fronts. Current knowledge explains the enhanced primary production and phytoplankton growth found in frontal areas by external factors like nutrient input. The question is whether this enhancement is also caused by intrinsic factors, i.e. simple mixing without external forcing. In order to study the direct effect of frontal mixing on organisms, disturbing external influx has to be excluded. Therefore mixing was simulated by joining waters originating from inside and outside the filament in mesocosms (tanks. These experiments were conducted during two cruises in the northern Benguela upwelling system in September 2013 and January 2014. The mixed waters reached a much higher net primary production and chlorophyll a (chla concentration than the original waters already 2-3 days after their merging. The peak in phytoplankton biomass stays longer than the chla peak. After their maxima, primary production rates decreased quickly due to depletion of the nutrients. The increase in colored dissolved organic matter (CDOM may indicate excretion and degradation. Zooplankton is not quickly reacting on the changed conditions. We conclude that already simple mixing of two water bodies, which occurs generally at fronts between upwelled and ambient water, leads to a short-term stimulation of the phytoplankton growth. However, after the exhaustion of the nutrient stock, external nutrient supply is necessary to maintain the enhanced phytoplankton growth in the frontal area. Based on these data, some generally important ecological factors are discussed as for example nutrient ratios and limitations, silicate requirements and growth rates.

  18. Short commentary on marine productivity at Arctic shelf breaks: upwelling, advection and vertical mixing

    Directory of Open Access Journals (Sweden)

    A. Randelhoff

    2018-04-01

    Full Text Available The future of Arctic marine ecosystems has received increasing attention in recent years as the extent of the sea ice cover is dwindling. Although the Pacific and Atlantic inflows both import huge quantities of nutrients and plankton, they feed into the Arctic Ocean in quite diverse regions. The strongly stratified Pacific sector has a historically heavy ice cover, a shallow shelf and dominant upwelling-favourable winds, while the Atlantic sector is weakly stratified, with a dynamic ice edge and a complex bathymetry. We argue that shelf break upwelling is likely not a universal but rather a regional, albeit recurring, feature of the new Arctic. It is the regional oceanography that decides its importance through a range of diverse factors such as stratification, bathymetry and wind forcing. Teasing apart their individual contributions in different regions can only be achieved by spatially resolved time series and dedicated modelling efforts. The Northern Barents Sea shelf is an example of a region where shelf break upwelling likely does not play a dominant role, in contrast to the shallower shelves north of Alaska where ample evidence for its importance has already accumulated. Still, other factors can contribute to marked future increases in biological productivity along the Arctic shelf break. A warming inflow of nutrient-rich Atlantic Water feeds plankton at the same time as it melts the sea ice, permitting increased photosynthesis. Concurrent changes in sea ice cover and zooplankton communities advected with the boundary currents make for a complex mosaic of regulating factors that do not allow for Arctic-wide generalizations.

  19. Short commentary on marine productivity at Arctic shelf breaks: upwelling, advection and vertical mixing

    Science.gov (United States)

    Randelhoff, Achim; Sundfjord, Arild

    2018-04-01

    The future of Arctic marine ecosystems has received increasing attention in recent years as the extent of the sea ice cover is dwindling. Although the Pacific and Atlantic inflows both import huge quantities of nutrients and plankton, they feed into the Arctic Ocean in quite diverse regions. The strongly stratified Pacific sector has a historically heavy ice cover, a shallow shelf and dominant upwelling-favourable winds, while the Atlantic sector is weakly stratified, with a dynamic ice edge and a complex bathymetry. We argue that shelf break upwelling is likely not a universal but rather a regional, albeit recurring, feature of the new Arctic. It is the regional oceanography that decides its importance through a range of diverse factors such as stratification, bathymetry and wind forcing. Teasing apart their individual contributions in different regions can only be achieved by spatially resolved time series and dedicated modelling efforts. The Northern Barents Sea shelf is an example of a region where shelf break upwelling likely does not play a dominant role, in contrast to the shallower shelves north of Alaska where ample evidence for its importance has already accumulated. Still, other factors can contribute to marked future increases in biological productivity along the Arctic shelf break. A warming inflow of nutrient-rich Atlantic Water feeds plankton at the same time as it melts the sea ice, permitting increased photosynthesis. Concurrent changes in sea ice cover and zooplankton communities advected with the boundary currents make for a complex mosaic of regulating factors that do not allow for Arctic-wide generalizations.

  20. Genome-wide identification, functional prediction, and evolutionary analysis of the R2R3-MYB superfamily in Brassica napus.

    Science.gov (United States)

    Hajiebrahimi, Ali; Owji, Hajar; Hemmati, Shiva

    2017-10-01

    R2R3-MYB transcription factors (TFs) have been shown to play important roles in plants, including in development and in various stress conditions. Phylogenetic analysis showed the presence of 249 R2R3-MYB TFs in Brassica napus, called BnaR2R3-MYB TFs, clustered into 38 clades. BnaR2R3-MYB TFs were distributed on 19 chromosomes of B. napus. Sixteen gene clusters were identified. BnaR2R3-MYB TFs were characterized by motif prediction, gene structure analysis, and gene ontology. Evolutionary analysis revealed that BnaR2R3-MYB TFs are mainly formed as a result of whole-genome duplication. Orthologs and paralogs of BnaR2R3-MYB TFs were identified in B. napus, B. rapa, B. oleracea, and Arabidopsis thaliana using synteny-based methods. Purifying selection was pervasive within R2R3-MYB TFs. K n /K s values lower than 0.3 indicated that BnaR2R3-MYB TFs are being functionally converged. The role of gene conversion in the formation of BnaR2R3-MYB TFs was significant. Cis-regulatory elements in the upstream regions of BnaR2R3-MYB genes, miRNA targeting BnaR2R3MYB TFs, and post translational modifications were identified. Digital expression data revealed that BnaR2R3-MYB genes were highly expressed in the roots and under high salinity treatment after 24 h. BnaMYB21, BnaMYB141, and BnaMYB148 have been suggested for improving salt-tolerant B. napus. BnaR2R3-MYB genes were mostly up regulated on the 14th day post inoculation with Leptosphaeria biglobosa and L. maculan. BnaMYB150 is a candidate for increased tolerance to Leptospheria in B. napus.

  1. Biological response to coastal upwelling and dust deposition in the area off Northwest Africa

    Science.gov (United States)

    Ohde, T.; Siegel, H.

    2010-05-01

    Nutrient supply in the area off Northwest Africa is mainly regulated by two processes, coastal upwelling and deposition of Saharan dust. In the present study, both processes were analyzed and evaluated by different methods, including cross-correlation, multiple correlation, and event statistics, using remotely sensed proxies of the period from 2000 to 2008 to investigate their influence on the marine environment. The remotely sensed chlorophyll- a concentration was used as a proxy for the phytoplankton biomass stimulated by nutrient supply into the euphotic zone from deeper water layers and from the atmosphere. Satellite-derived alongshore wind stress and sea-surface temperature were applied as proxies for the strength and reflection of coastal upwelling processes. The westward wind and the dust component of the aerosol optical depth describe the transport direction of atmospheric dust and the atmospheric dust column load. Alongshore wind stress and induced upwelling processes were most significantly responsible for the surface chlorophyll- a variability, accounting for about 24% of the total variance, mainly in the winter and spring due to the strong north-easterly trade winds. The remotely sensed proxies allowed determination of time lags between biological response and its forcing processes. A delay of up to 16 days in the surface chlorophyll- a concentration due to the alongshore wind stress was determined in the northern winter and spring. Although input of atmospheric iron by dust storms can stimulate new phytoplankton production in the study area, only 5% of the surface chlorophyll- a variability could be ascribed to the dust component in the aerosol optical depth. All strong desert storms were identified by an event statistics in the time period from 2000 to 2008. The 57 strong storms were studied in relation to their biological response. Six events were clearly detected in which an increase of chlorophyll- a was caused by Saharan dust input and not by

  2. Biological consequences of environmental changes related to coastal upwelling: a simulation study

    Energy Technology Data Exchange (ETDEWEB)

    Howe, S.O.

    1979-05-01

    Two simulation models of marine ecosystem dynamics are formulated and applied to field data. The first is a time-dependent model of phytoplankton growth in nutrient-enriched batch cultures where spatial gradients of dependent variables and the effects of higher tropic level processes are not included. Rates of photosynthesis, nutrient uptake, chlorophyll synthesis and cell division for a single phytoplankton functional group are simulated as functions of photosynthetically active solar radiation, dissolved nutrient concentrations and cell quotas of carbon, nitrogen and silica. The second model combines the phytoplankton growth model with a time dependent, two-dimensional model of coastal upwelling off northwest Africa.

  3. L' upwelling de la côte atlantique du Maroc entre 1994 et 1998

    Science.gov (United States)

    Makaoui, Ahmed; Orbi, Abdelattif; Hilmi, Karim; Zizah, Soukaina; Larissi, Jamila; Talbi, Mohammed

    2005-12-01

    The pelagic ecosystem of the Moroccan Atlantic coast is influenced by the spatiotemporal variability of upwelling. The changes in the physicochemical and biological parameters as well as their interrelationship and regrouping by the principal components analysis allowed us to subdivide the Atlantic coast in four active areas: two areas located at the north of Cape Juby (28°N), characterised by a summery activity and two areas located at the south, active permanently, with a variable intensity. To cite this article: A. Makaoui et al., C. R. Geoscience 337 (2005).

  4. Regulation of bacterial sulfate reduction and hydrogen sulfide fluxes in the central Namibian coastal upwelling zone

    DEFF Research Database (Denmark)

    Bruchert, V.; Jørgensen, BB; Neumann, K.

    2003-01-01

    The coastal upwelling system off central Namibia is one of the most productive regions of the oceans and is characterized by frequently occurring shelf anoxia with severe effects for the benthic life and fisheries. We present data on water column dissolved oxygen, sulfide, nitrate and nitrite, pore......-depleted bottom waters, the oxygen minimum zone on the continental slope, and the lower continental slope below the oxygen minimum zone. High concentrations of dissolved sulfide, up to 22 mM, in the near-surface sediments of the inner shelf result from extremely high rates of bacterial sulfate reduction...

  5. Seasonal changes in nutrient limitation and nitrate sources in the green macroalga Ulva lactuca at sites with and without green tides in a northeastern Pacific embayment.

    Science.gov (United States)

    Van Alstyne, Kathryn L

    2016-02-15

    In Penn Cove, ulvoid green algal mats occur annually. To examine seasonal variation in their causes, nitrogen and carbon were measured in Ulva lactuca in May, July, and September and stable nitrogen and oxygen isotope ratios were quantified in U. lactuca, Penn Cove seawater, upwelled water from Saratoga Passage, water near the Skagit River outflow, and effluents from wastewater treatment facilities. Ulvoid growth was nitrogen limited and the sources of nitrogen used by the algae changed during the growing season. Algal nitrogen concentrations were 0.85-4.55% and were highest in September and at sites where algae were abundant. Upwelled waters were the primary nitrogen source for the algae, but anthropogenic sources also contributed to algal growth towards the end of the growing season. This study suggests that small nitrogen inputs can result in crossing a "tipping point", causing the release of nutrient limitation and localized increases in algal growth. Copyright © 2015 Elsevier Ltd. All rights reserved.

  6. Coastal upwelling by wind-driven forcing in Jervis Bay, New South Wales: A numerical study for 2011

    Science.gov (United States)

    Sun, Youn-Jong; Jalón-Rojas, Isabel; Wang, Xiao Hua; Jiang, Donghui

    2018-06-01

    The Princeton Ocean Model (POM) was used to investigate an upwelling event in Jervis Bay, New South Wales (SE Australia), with varying wind directions and strengths. The POM was adopted with a downscaling approach for the regional ocean model one-way nested to a global ocean model. The upwelling event was detected from the observed wind data and satellite sea surface temperature images. The validated model reproduced the upwelling event showing the input of bottom cold water driven by wind to the bay, its subsequent deflection to the south, and its outcropping to the surface along the west and south coasts. Nevertheless, the behavior of the bottom water that intruded into the bay varied with different wind directions and strengths. Upwelling-favorable wind directions for flushing efficiency within the bay were ranked in the following order: N (0°; northerly) > NNE (30°; northeasterly) > NW (315°; northwesterly) > NE (45°; northeasterly) > ENE (60°; northeasterly). Increasing wind strengths also enhance cold water penetration and water exchange. It was determined that wind-driven downwelling within the bay, which occurred with NNE, NE and ENE winds, played a key role in blocking the intrusion of the cold water upwelled through the bay entrance. A northerly wind stress higher than 0.3 N m-2 was required for the cold water to reach the northern innermost bay.

  7. TrxR2 deficiencies promote chondrogenic differentiation and induce apoptosis of chondrocytes through mitochondrial reactive oxygen species

    International Nuclear Information System (INIS)

    Yan, Jidong; Xu, Jing; Fei, Yao; Jiang, Congshan; Zhu, Wenhua; Han, Yan; Lu, Shemin

    2016-01-01

    Thioredoxin reductase 2 (TrxR2) is a selenium (Se) containing protein. Se deficiency is associated with an endemic osteoarthropathy characterized by impaired cartilage formation. It is unclear whether TrxR2 have roles in cartilage function. We examined the effects of TrxR2 on chondrogenic ATDC5 cells through shRNA-mediated gene silencing of TrxR2. We demonstrated TrxR2 deficiencies could enhance chondrogenic differentiation and apoptosis of ATDC5 cells. TrxR2 deficiencies increased accumulation of cartilage glycosaminoglycans (GAGs) and mineralization. TrxR2 deficiencies also stimulated expression of extracellular (ECM) gene including Collagen II and Aggrecan. The enhanced chondrogenic properties were further confirmed by activation of Akt signaling which are required for chondrogenesis. In addition, TrxR2 deficiencies promoted chondrocyte proliferation through acceleration of cell cycle progression by increase in both S and G2/M phase cell distribution accompanied with induction of parathyroid hormone-related protein (PTHrP). Moreover, TrxR2 deficiencies induced chondrocyte death via apoptosis and increased cell sensitivity to exogenous oxidative stress. Furthermore, TrxR2 deficiencies induced emission of mitochondrial reactive oxygen species (ROS) without alteration of mitochondrial membrane potential and intracellular ATP content. Finally, treatment of TrxR2 deficiency cells with N-acetylcysteine (NAC) inhibited mitochondrial ROS production and chondrocyte apoptosis. NAC also prevented chondrogenic differentiation of TrxR2 deficiency cells by suppression of ECM gene expression, GAGs accumulation and mineralization, as well as attenuation of Akt signaling. Thus, TrxR2-mediated mitochondrial integrity is indispensable for chondrogenic differentiation of ATDC5 cells. TrxR2 deficiency-induced impaired proliferation and death of chondrocytes may be the pathological mechanism of the osteoarthropathy due to Se deficiency. Notably, this study also uncover the roles of

  8. TrxR2 deficiencies promote chondrogenic differentiation and induce apoptosis of chondrocytes through mitochondrial reactive oxygen species

    Energy Technology Data Exchange (ETDEWEB)

    Yan, Jidong [Department of Human Anatomy, Histology and Embryology, School of Basic Medical Sciences, Xi’an Jiaotong University Health Science Center, Xi’an, Shaanxi 710061 (China); Xu, Jing [Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Xi’an Jiaotong University Health Science Center, Xi’an, Shaanxi 710061 (China); Fei, Yao [College of Life Sciences, Northwest University, Xi’an, Shaanxi Province 710069 (China); Jiang, Congshan; Zhu, Wenhua; Han, Yan [Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Xi’an Jiaotong University Health Science Center, Xi’an, Shaanxi 710061 (China); Lu, Shemin, E-mail: lushemin@xjtu.edu.cn [Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Xi’an Jiaotong University Health Science Center, Xi’an, Shaanxi 710061 (China); Key Laboratory of Environment and Genes Related to Diseases, Xi’an Jiaotong University, Ministry of Education of China (China)

    2016-05-15

    Thioredoxin reductase 2 (TrxR2) is a selenium (Se) containing protein. Se deficiency is associated with an endemic osteoarthropathy characterized by impaired cartilage formation. It is unclear whether TrxR2 have roles in cartilage function. We examined the effects of TrxR2 on chondrogenic ATDC5 cells through shRNA-mediated gene silencing of TrxR2. We demonstrated TrxR2 deficiencies could enhance chondrogenic differentiation and apoptosis of ATDC5 cells. TrxR2 deficiencies increased accumulation of cartilage glycosaminoglycans (GAGs) and mineralization. TrxR2 deficiencies also stimulated expression of extracellular (ECM) gene including Collagen II and Aggrecan. The enhanced chondrogenic properties were further confirmed by activation of Akt signaling which are required for chondrogenesis. In addition, TrxR2 deficiencies promoted chondrocyte proliferation through acceleration of cell cycle progression by increase in both S and G2/M phase cell distribution accompanied with induction of parathyroid hormone-related protein (PTHrP). Moreover, TrxR2 deficiencies induced chondrocyte death via apoptosis and increased cell sensitivity to exogenous oxidative stress. Furthermore, TrxR2 deficiencies induced emission of mitochondrial reactive oxygen species (ROS) without alteration of mitochondrial membrane potential and intracellular ATP content. Finally, treatment of TrxR2 deficiency cells with N-acetylcysteine (NAC) inhibited mitochondrial ROS production and chondrocyte apoptosis. NAC also prevented chondrogenic differentiation of TrxR2 deficiency cells by suppression of ECM gene expression, GAGs accumulation and mineralization, as well as attenuation of Akt signaling. Thus, TrxR2-mediated mitochondrial integrity is indispensable for chondrogenic differentiation of ATDC5 cells. TrxR2 deficiency-induced impaired proliferation and death of chondrocytes may be the pathological mechanism of the osteoarthropathy due to Se deficiency. Notably, this study also uncover the roles of

  9. 4-bit digital to analog converter using R-2R ladder and binary weighted resistors

    Science.gov (United States)

    Diosanto, J.; Batac, M. L.; Pereda, K. J.; Caldo, R.

    2017-06-01

    The use of a 4-bit digital-to-analog converter using two methods; Binary Weighted Resistors and R-2R Ladder is designed and presented in this paper. The main components that were used in constructing both circuits were different resistor values, operational amplifier (LM741) and single pole double throw switches. Both circuits were designed using MULTISIM software to be able to test the circuit for its ideal application and FRITZING software for the layout designing and fabrication to the printed circuit board. The implementation of both systems in an actual circuit benefits in determining and comparing the advantages and disadvantages of each. It was realized that the binary weighted circuit is more efficient DAC, having lower percentage error of 0.267% compared to R-2R ladder circuit which has a minimum of percentage error of 4.16%.

  10. JESS-D-16-00284 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  11. JESS-D-16-00189 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  12. JESS-D-16-00274 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  13. JESS-D-16-00392 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  14. JESS-D-16-00575 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  15. JESS-D-16-00024 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  16. JESS-D-16-00523 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  17. JESS-D-16-00354R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  18. JESS-D-16-00043 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  19. JESS-D-16-00107 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  20. JESS-D-16-00032 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  1. JESS-D-16-00351 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  2. JESS-D-16-00222 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  3. JESS-D-16-00044 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  4. JESS-D-16-00263 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  5. JESS-D-16-00005R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  6. Low-Concentration Tributyltin Decreases GluR2 Expression via Nuclear Respiratory Factor-1 Inhibition

    OpenAIRE

    Ishida, Keishi; Aoki, Kaori; Takishita, Tomoko; Miyara, Masatsugu; Sakamoto, Shuichiro; Sanoh, Seigo; Kimura, Tomoki; Kanda, Yasunari; Ohta, Shigeru; Kotake, Yaichiro

    2017-01-01

    Tributyltin (TBT), which has been widely used as an antifouling agent in paints, is a common environmental pollutant. Although the toxicity of high-dose TBT has been extensively reported, the effects of low concentrations of TBT are relatively less well studied. We have previously reported that low-concentration TBT decreases ?-amino-3-hydroxy-5-methylisoxazole-4-propionic acid (AMPA)-type glutamate receptor subunit 2 (GluR2) expression in cortical neurons and enhances neuronal vulnerability ...

  7. JESS-D-16-00578 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  8. JESS-D-16-00482 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  9. JESS-D-16-00067 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  10. JESS-D-16-00542 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  11. JESS-D-16-00450 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  12. JESS-D-16-00589 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  13. JESS-D-16-00197 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  14. JESS-D-16-00418 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  15. JESS-D-16-00127R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

    Home; public; Volumes; jess; forthcoming; JESS-D-16-00127R2.pdf. 404! error. The page your are looking for can not be found! Please check the link or use the navigation bar at the top. YouTube; Twitter; Facebook; Blog. Academy News. IAS Logo. 29th Mid-year meeting. Posted on 19 January 2018. The 29th Mid-year ...

  16. JESS-D-16-00307 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

    Home; public; Volumes; jess; forthcoming; JESS-D-16-00307 R2.pdf. 404! error. The page your are looking for can not be found! Please check the link or use the navigation bar at the top. YouTube; Twitter; Facebook; Blog. Academy News. IAS Logo. 29th Mid-year meeting. Posted on 19 January 2018. The 29th Mid-year ...

  17. JESS-D-16-00302 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

    Home; public; Volumes; jess; forthcoming; JESS-D-16-00302 R2.pdf. 404! error. The page your are looking for can not be found! Please check the link or use the navigation bar at the top. YouTube; Twitter; Facebook; Blog. Academy News. IAS Logo. 29th Mid-year meeting. Posted on 19 January 2018. The 29th Mid-year ...

  18. JESS-D-16-00429 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  19. JESS-D-16-00330 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  20. JESS-D-16-00409 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

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  1. JESS-D-16-00287 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

    Home; public; Volumes; jess; forthcoming; JESS-D-16-00287 R2.pdf. 404! error. The page your are looking for can not be found! Please check the link or use the navigation bar at the top. YouTube; Twitter; Facebook; Blog. Academy News. IAS Logo. 29th Mid-year meeting. Posted on 19 January 2018. The 29th Mid-year ...

  2. JESS-D-15-00464R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

    Home; public; Volumes; jess; forthcoming; JESS-D-15-00464R2.pdf. 404! error. The page your are looking for can not be found! Please check the link or use the navigation bar at the top. YouTube; Twitter; Facebook; Blog. Academy News. IAS Logo. 29th Mid-year meeting. Posted on 19 January 2018. The 29th Mid-year ...

  3. JESS-D-16-00567 R2.pdf | forthcoming | jess | Volumes | public ...

    Indian Academy of Sciences (India)

    Home; public; Volumes; jess; forthcoming; JESS-D-16-00567 R2.pdf. 404! error. The page your are looking for can not be found! Please check the link or use the navigation bar at the top. YouTube; Twitter; Facebook; Blog. Academy News. IAS Logo. 29th Mid-year meeting. Posted on 19 January 2018. The 29th Mid-year ...

  4. Rolling Deck to Repository (R2R): Collaborative Development of Linked Data for Oceanographic Research

    Science.gov (United States)

    Arko, Robert; Chandler, Cynthia; Stocks, Karen; Smith, Shawn; Clark, Paul; Shepherd, Adam; Moore, Carla; Beaulieu, Stace

    2013-04-01

    The Rolling Deck to Repository (R2R) program is developing infrastructure to ensure the underway sensor data from U.S. academic oceanographic research vessels are routinely and consistently documented, preserved in long-term archives, and disseminated to the science community. The entire R2R Catalog is published online as a Linked Data collection, making it easily accessible to encourage discovery and integration with data at other repositories. We are developing the R2R Linked Data collection with specific goals in mind: 1.) We facilitate data access and reuse by publishing the richest possible collection of resources to describe vessels, cruises, instruments, and datasets from the U.S. academic fleet, including data quality assessment results and clean trackline navigation; 2.) We facilitate data citation through the entire lifecycle from field acquisition to shoreside archiving to journal articles and global syntheses, by publishing Digital Object Identifiers (DOIs) for datasets and encoding them directly into our Linked Data resources; and 3.) We facilitate federation with other repositories such as the Biological and Chemical Oceanography Data Management Office (BCO-DMO), InterRidge Vents Database, and Index to Marine and Lacustrine Geological Samples (IMLGS), by reciprocal linking between RDF resources and supporting the RDF Query Language. R2R participates in the Ocean Data Interoperability Platform (ODIP), a joint European-U.S.-Australian partnership to facilitate the sharing of data and documentation across international borders. We publish our controlled vocabularies as a Simple Knowledge Organization System (SKOS) concept collection, and are working toward alignment with SeaDataNet and other community-standard terms using the NERC Vocabulary Server (NVS). http://rvdata.us/

  5. FED-R2: concept and magnet design of a low-cost FED

    International Nuclear Information System (INIS)

    Williams, J.E.C.; Becker, H.; Blackfield, D.; Bobrov, E.; Bromberg, L.; Cohn, D.R.; Diatchenko, N.; LeClaire, R.

    1982-12-01

    High performance resistive magnet technology was used to develop a design for a compact, low cost version of the fusion engineering device FED. We refer to this design as FED-R2, for FED-resistive magnet design 2 to distinguish it from the larger resistive magnet design for FED which uses demountable coils (FED-R1). The main objectives of FED-R2 are: (1) to demonstrate reliable, quasi-steady state (long pulse, high duty factor) operation with Q/sub p/ approx. 5; (2) to demonstrate Q/sub p/ > 5 operation for a limited number of pulses; (3) to provide high neutron flux for irradiation of nuclear test modules with a total area greater tha 20m 2 ; (4) to utilize steady-state RF current drive if this option appears promising. Based upon the costing codes at the Fusion Engineering Design Center and upon TFTR costs, the estimated direct costs of FED-R2 would be on the range 380 to 460M, a factor of about 2 below that of the baseline FED design

  6. High-pressure synthesis and characterizations of the R2Pt2O7 pyrochlores.

    Science.gov (United States)

    Cai, Yunqi; Cui, Qi; Cheng, Jinguang; Dun, Zhiling; Zhou, Haidong; Ma, Jie; Cruz, C. Dela; Yan, Jiaqiang; Li, Xiang; Zhou, Jianshi

    Pyrochlore R2B2O7 where R3 + stands for rear-earth ion and B4 + for a nonmagnetic cation such as Sn4 +or Ti4 +consist of an important family of geometrically frustrated magnets, which have been the focus of extensive investigations over last decades. To further enlarge the R2B2O7, we have chosen to stabilize the Pt-based cubic pyrochlores under HPHT conditions for two reasons: (1) Pt4 + is in a low-spin state which ionic radius is located in between Ti4 + (0.605\\x85) and Sn4 + (0.69\\x85), and (2) Pt4 + has a spatially much more extended 5d orbitals and thus enhanced Pt 5d-O 2p hybridizations that might modify the local anisotropic exchange interactions. Such an effect has never been taken into account in the previous studies. In this work, we will present the detailed characterizations on the pyrochlores R2Pt2O7 obtained under HPHT conditions. This work is supported by the National Science Foundation of China (Grant Nos.11304371, 11574377), part of the work was supported by the CEM, and NSF MRSEC, under Grant DMR-1420451, and Grant No. NSF-DMR-1350002.

  7. Antifungal potential of Bacillus vallismortis R2 against different phytopathogenic fungi

    Energy Technology Data Exchange (ETDEWEB)

    Kaur, P.K.; Kaur, J.; Saini, H.S.

    2015-07-01

    The cash crops grown in an agro-climatic region are prone to infection by various fungal pathogens. The use of chemical fungicides over the years has resulted in emergence of resistant fungal strains, thereby necessitating the development of effective and environmental friendly alternatives. The natural antagonistic interactions among different microbial populations have been exploited as an eco-friendly approach for controlling fungal pathogens resistant to synthetic chemicals. Morphologically distinct bacterial cultures (150), isolated from rhizospheric soils of wheat, rice, onion and tomato plants were screened for their antifungal potential against seven phytopathogenic fungi prevalent in the State of Punjab (India). The bacterial isolate R2, identified as Bacillus vallismortis, supported more than 50% inhibition of different phytopathogenic fungi (Alternaria alternata, Rhizoctonia oryzae, Fusarium oxysporum, Fusarium moniliforme, Colletotrichum sp, Helminthosporium sp and Magnaporthe grisea) in dual culture plate assay. The thin layer chromatography based bio-autography of acid-precipitated biomolecules (APB) indicated the presence of more than one type of antifungal molecule, as evidenced from zones of inhibition against the respective fungal pathogen. The initial analytical studies indicated the presence of surfactin, iturin A and fengycin-like compounds in APB. The antifungal activity of whole cells and APB of isolate R2 was evaluated by light and scanning electron microscopy. The wheat grains treated with APB and exposed to spores of A. alternata showed resistance to the development of black point disease, thereby indicating the potential application of R2 and its biomolecules at field scale level. (Author)

  8. R2* mapping for brain iron: associations with cognition in normal aging.

    Science.gov (United States)

    Ghadery, Christine; Pirpamer, Lukas; Hofer, Edith; Langkammer, Christian; Petrovic, Katja; Loitfelder, Marisa; Schwingenschuh, Petra; Seiler, Stephan; Duering, Marco; Jouvent, Eric; Schmidt, Helena; Fazekas, Franz; Mangin, Jean-Francois; Chabriat, Hugues; Dichgans, Martin; Ropele, Stefan; Schmidt, Reinhold

    2015-02-01

    Brain iron accumulates during aging and has been associated with neurodegenerative disorders including Alzheimer's disease. Magnetic resonance (MR)-based R2* mapping enables the in vivo detection of iron content in brain tissue. We investigated if during normal brain aging iron load relates to cognitive impairment in region-specific patterns in a community-dwelling cohort of 336 healthy, middle aged, and older adults from the Austrian Stroke Prevention Family Study. MR imaging and R2* mapping in the basal ganglia and neocortex were done at 3T. Comprehensive neuropsychological testing assessed memory, executive function, and psychomotor speed. We found the highest iron concentration in the globus pallidus, and pallidal and putaminal iron was significantly and inversely associated with cognitive performance in all cognitive domains, except memory. These associations were iron load dependent. Vascular brain lesions and brain volume did not mediate the relationship between iron and cognitive performance. We conclude that higher R2*-determined iron in the basal ganglia correlates with cognitive impairment during brain aging independent of concomitant brain abnormalities. The prognostic significance of this finding needs to be determined. Copyright © 2015 Elsevier Inc. All rights reserved.

  9. Magnetic phase transitions in R2Fe17 compounds under pressure

    International Nuclear Information System (INIS)

    Arnold, Z.; Kamarad, J.

    1994-01-01

    The effect of the pressure up to 1.4 GPa on the Curie temperature T c in the R 2 Fe 17 intermetallics with R = Nd, Er and Y was measured using a low field susceptibility technique. The identical character of the temperature dependence of susceptibility χ(T) of the R 2 Fe 17 intermetallics observed at ambient pressure (sharp step-like drop at T c ) is preserved at high pressures only in the case of Nd 2 Fe 17 . Pronounced broadening and splitting of the sharp drop of χ(T) was observed in Er 2 Fe 17 and Y 2 Fe 17 respectively. The initial pressure slopes of dTc/dp are large and negative for all studied compounds, having nearly the same values (dTc/dp = -36K/GPa for Nd 2 Fe 17 compound). The results are discussed from the point of view of the sensitivity of T c on the crystal structure, the number of nearest neighbors of Fe atoms and the possible effect of disordered structures in the R 2 Fe 17 intermetallics

  10. Opening of the South China Sea and Upwelling of the Hainan Plume

    Science.gov (United States)

    Yu, Mengming; Yan, Yi; Huang, Chi-Yue; Zhang, Xinchang; Tian, Zhixian; Chen, Wen-Huang; Santosh, M.

    2018-03-01

    Opening of the South China Sea and upwelling of the Hainan Plume are among the most challenging issues related to the tectonic evolution of East Asia. However, when and how the Hainan Plume affected the opening of the South China Sea remains unclear. Here we investigate the geochemical and isotopic features of the 25 Ma mid-ocean ridge basalt (MORB) in the Kenting Mélange, southern Taiwan, 16 Ma MORB drilled by the IODP Expedition 349, and 9 Ma ocean island basalt-type dredged seamount basalt. The 25 Ma MORBs reveal a less metasomatic depleted MORB mantle-like source. In contrast, the Miocene samples record progressive mantle enrichment and possibly signal the contribution of the Hainan Plume. We speculate that MORBs of the South China Sea which could have recorded plume-ridge source mixing perhaps appear since 23.8 Ma. On the contrary, the Paleocene-Eocene ocean island basalt-type intraplate volcanism of the South China continental margin is correlated to decompression melting of a passively upwelling fertile asthenosphere due to continental rifting.

  11. Currents and upwelling along the Latium coasts in the Central Tyrrhenian Sea (western Mediterranean

    Directory of Open Access Journals (Sweden)

    V. Rossi

    1995-04-01

    Full Text Available In this study, springtime coastal currents along the Latium coast and their relation to external forcings, mainly wind stress curl and atmospheric pressure, are analysed. As a main result, we find that hydrographical measurements reveal currents parallel to the bottom isobaths, but with isopycnal sloping upwards towards the coast, suggesting the importance of upwellings in determining the coastal currents. This is confirmed by thermal satellite data showing the presence of a ~10-km-wide patch of cold water east of Mount Argentario, i.e. a cyclonic vortex. The current meter data give rather small values of the time-averaged alongshore velocities (~2 cm s–1 for most current meters and ~3 cm s–1 for the current meter placed immediately off the Argentario and also smaller values for the offshore velocities. The correlation between these two types of currents is rather poor; this is also due to the variability characteristic of a wind-induced upwelling. Finally, we obtain a value of 0.74 for the correlation between the alongshore current (first mode of Empirical Orthogonal Functions decomposition and the wind stress if a 23-h time lag is assumed.

  12. Joint effect of freshwater plume and coastal upwelling on phytoplankton growth off the Changjiang River

    Science.gov (United States)

    Tseng, Y.-F.; Lin, J.; Dai, M.; Kao, S.-J.

    2014-01-01

    The Changjiang (Yangtze) River discharges vast amount of unbalanced nutrients (dissolved inorganic nitrogen and phosphorus with N / P ratio > 80 in general) into the East China Sea in summer. To study nutrient dynamics and P-stress potential for phytoplankton, a cruise was conducted in the Changjiang plume during summer 2011. With 3-D observations of nutrients, chlorophyll a (Chl a), and bulk alkaline phosphatase activity (APA), we concluded that the Changjiang Diluted Water and coastal upwelling significantly influenced the horizontal and vertical heterogeneities of phytoplankton P deficiency in the Changjiang plume. Allochthonous APA was detected at nutrient-enriched freshwater end. Excessive N (~ 10 to 112 μM) was observed throughout the entire plume surface. In the plume fringe featuring stratification and excess N, diapycnal phosphate supply was blocked and phytoplankton APA was stimulated for growth. We observed an upwelling just attaching to the turbidity front at seaward side where Chl a peaked yet much less APA was detected. An external phosphate supply from subsurface, which promoted phytoplankton growth but inhibited APA, was suggested to be sourced from the Nearshore Kuroshio Branch Current. In the so hydrographically complicated Changjiang plume, phosphate supply instead of its concentration may be more important in determining the expression of APA. Meanwhile, allochthonous APA may also alter the usefulness of APA as a P-stress indicator.

  13. Isotopic and enzymatic analyses of planktonic nitrogen utilisation in the vicinity of Cape Sines (Portugal) during weak upwelling activity

    Science.gov (United States)

    Slawyk, Gerd; Coste, Bernard; Collos, Yves; Rodier, Martine

    1997-01-01

    Using measurements of 15N uptake and activities of nitrate reductase and glutamine synthetase, the utilization of nitrogenous nutrients by microplankton in the Portuguese upwelling area was investigated. During this cruise the euphotic zone of coastal waters was in most cases bisected by a nitracline forming two layers. Total inorganic nitrogen uptake rates (NH 4+ + NO 3-) in the upper mixed and nitrate-impoverished layer ranged from 0.1 to 0.8 nM h -1 and were primarily supported by regenerated (ammonium) nitrogen (62-97%), whereas they varied between 0.9 and 10.4 nM h -1 in the deep nitrate-rich layer and were mainly driven by new (nitrate) nitrogen (52-82%). Depth profiles of Chl a-specific uptake rates for ammonium and nitrate paralleled those of absolute uptake rates, i.e. values of VNH 4+Chl were highest (up to 16.1 nmol μg -1 h -1) in nitrate-poor surface waters while values of VNO 3-Chl were maximum (up to 8.4 nmol μg -1 h -1)within the nitracline. This latter vertical ordering of planktonic nitrogen nutrition was consistent with an aged upwelling situation. However, applying several indices of cell metabolism and nutritional status, such as 15N uptake/enzyme activity, surge uptake internally controlled uptake, and V maxChl/K t ratios, we were able to demonstrate that the phytoplankton assemblages inhabiting the nutrient-impoverished upper layer still bore the signature of physically mediated nitrogen (nitrate) supply generated by active upwelling that had occurred during the week before our visit to the area. This signature was the most evident in samples from the station furthest inshore and faded with distance from shore as a result of the deepening of the nitrate isopleths (weakening of upwelling activity), which showed the same offshore trend. The appearance of nitrate-rich waters at the surface, after a strong pulse of upwelling favourable winds just before the end of the cruise, led to a five-fold increase in average (over the euphotic zone

  14. Microplankton biomass and diversity in the Vietnamese upwelling area during SW monsoon under normal conditions and after an ENSO event

    DEFF Research Database (Denmark)

    Loick-Wilde, Natalie; Bombar, Deniz; Doan, Hai Nhu

    2017-01-01

    to show how climatological-driven changes can have a significant influence on the distribution of microplankton communities and their biomass via its impact on nutrient concentrations in the water column. The first summer in July 2003 followed a weak El-Nino Southern Oscillation (ENSO) event...... (10–20 µm) prevailed ubiquitously during reduced upwelling. During normal upwelling, the diatom Rhizosolenia sp. dominated the cell-carbon biomass in the silicate poor upwelling waters. Trichodesmium erythraeum dominated in the Mekong-influenced and nutrient depleted offshore waters, where it co......Investigating microplankton biomass and diversity under different climatological conditions is key to the understanding of cascading effects of climate change on nutrient cycles and biological productivity. Here we have used data collected during two contrasting summers along the coast of Viet Nam...

  15. Apoptosis Induction by Targeting Interferon Gamma Receptor 2 (IFNgammaR2) in Prostate Cancer: Ligand (IFNgamma) Independent Novel Function of IFNgammaR2 as a Bax Inhibitor

    Science.gov (United States)

    2016-10-01

    Cisplatin (2uM, 30 hrs) PN (5uM, 55hrs) + Cisplatin (2uM, 30 hrs) •  Thorough studies are needed to examine the unknown mechanism of IFNgR2 and Bax as well as...mouse xenograft model. Task3: To determine the mechanism of increased IFNγR2 expression in PCa. We found that NFkB inhibitor suppressed IFNγR2 expression...suggesting that hyper-activation of NFkB may be one of the mechanisms of IFNγR2 overexpression in PCa. These results support our hypothesis that

  16. Average Potential Temperature of the Upper Mantle and Excess Temperatures Beneath Regions of Active Upwelling

    Science.gov (United States)

    Putirka, K. D.

    2006-05-01

    The question as to whether any particular oceanic island is the result of a thermal mantle plume, is a question of whether volcanism is the result of passive upwelling, as at mid-ocean ridges, or active upwelling, driven by thermally buoyant material. When upwelling is passive, mantle temperatures reflect average or ambient upper mantle values. In contrast, sites of thermally driven active upwellings will have elevated (or excess) mantle temperatures, driven by some source of excess heat. Skeptics of the plume hypothesis suggest that the maximum temperatures at ocean islands are similar to maximum temperatures at mid-ocean ridges (Anderson, 2000; Green et al., 2001). Olivine-liquid thermometry, when applied to Hawaii, Iceland, and global MORB, belie this hypothesis. Olivine-liquid equilibria provide the most accurate means of estimating mantle temperatures, which are highly sensitive to the forsterite (Fo) contents of olivines, and the FeO content of coexisting liquids. Their application shows that mantle temperatures in the MORB source region are less than temperatures at both Hawaii and Iceland. The Siqueiros Transform may provide the most precise estimate of TpMORB because high MgO glass compositions there have been affected only by olivine fractionation, so primitive FeOliq is known; olivine thermometry yields TpSiqueiros = 1430 ±59°C. A global database of 22,000 MORB show that most MORB have slightly higher FeOliq than at Siqueiros, which translates to higher calculated mantle potential temperatures. If the values for Fomax (= 91.5) and KD (Fe-Mg)ol-liq (= 0.29) at Siqueiros apply globally, then upper mantle Tp is closer to 1485 ± 59°C. Averaging this global estimate with that recovered at Siqueiros yields TpMORB = 1458 ± 78°C, which is used to calculate plume excess temperatures, Te. The estimate for TpMORB defines the convective mantle geotherm, and is consistent with estimates from sea floor bathymetry and heat flow (Stein and Stein, 1992), and

  17. How coastal upwelling influences spatial patterns of size-structured diversity of copepods off central-southern Chile (summer 2009)

    Science.gov (United States)

    Hidalgo, Pamela; Escribano, Ruben; Fuentes, Marcelo; Jorquera, Erika; Vergara, Odette

    2012-01-01

    This study assessed the structure of the copepod community in the upper 200 m of the coastal upwelling region off central-southern Chile in late summer 2009. Vertically stratified zooplankton samples and hydrographic variables were obtained from 42 stations over the continental shelf and oceanic areas. The survey took place during active upwelling, reflected by a cold upwelling plume extending out to 150 km offshore. A total of 62 copepod species were found. Of these, Oithona similis and Paracalanusindicus accounted for ca. 60% of the whole community. Species richness ( R) and the Shannon-Wiener diversity index ( H‧) were estimated, and the latter was additionally modified to incorporate the effect of copepod size on diversity ( H‧ s). Samples were analyzed for two depth strata (0-50, 50-200 m) and for day vs. night conditions. Significant effects of day vs. night and strata on R, H‧ and H‧ s indicated that diel vertical migration between these two layers was an important source of variation in the zooplankton community. H‧ s seemed to represent copepod diversity better than R and H‧ over the spatial scale. H‧ s was also closely linked to colder upwelled water and the depth of the oxygen minimum zone following a principal component analysis. A positive relationship was even detected between depth of the oxygen minimum zone and H‧ s when strata and day/night effects were excluded. Our findings suggested that the coastal upwelling process could be an important driver of copepod diversity in this region. Upwelling leads to changes in the depth of the oxygen minimum zone and these changes impact the community composition due to species-dependent tolerances to low oxygen water.

  18. A R2R3-MYB transcription factor from Epimedium sagittatum regulates the flavonoid biosynthetic pathway.

    Directory of Open Access Journals (Sweden)

    Wenjun Huang

    Full Text Available Herba epimedii (Epimedium, a traditional Chinese medicine, has been widely used as a kidney tonic and antirheumatic medicine for thousands of years. The bioactive components in herba epimedii are mainly prenylated flavonol glycosides, end-products of the flavonoid pathway. Epimedium species are also used as garden plants due to the colorful flowers and leaves. Many R2R3-MYB transcription factors (TFs have been identified to regulate the flavonoid and anthocyanin biosynthetic pathways. However, little is known about the R2R3-MYB TFs involved in regulation of the flavonoid pathway in Epimedium. Here, we reported the isolation and functional characterization of the first R2R3-MYB TF (EsMYBA1 from Epimedium sagittatum (Sieb. Et Zucc. Maxim. Conserved domains and phylogenetic analysis showed that EsMYBA1 belonged to the subgroup 6 clade (anthocyanin-related MYB clade of R2R3-MYB family, which includes Arabidopsis AtPAP1, apple MdMYB10 and legume MtLAP1. EsMYBA1 was preferentially expressed in leaves, especially in red leaves that contain higher content of anthocyanin. Alternative splicing of EsMYBA1 resulted in three transcripts and two of them encoded a MYB-related protein. Yeast two-hybrid and transient luciferase expression assay showed that EsMYBA1 can interact with several bHLH regulators of the flavonoid pathway and activate the promoters of dihydroflavonol 4-reductase (DFR and anthocyanidin synthase (ANS. In both transgenic tobacco and Arabidopsis, overexpression of EsMYBA1 induced strong anthocyanin accumulation in reproductive and/or vegetative tissues via up-regulation of the main flavonoid-related genes. Furthermore, transient expression of EsMYBA1 in E. sagittatum leaves by Agrobacterium infiltration also induced anthocyanin accumulation in the wounded area. This first functional characterization of R2R3-MYB TFs in Epimedium species will promote further studies of the flavonoid biosynthesis and regulation in medicinal plants.

  19. A R2R3-MYB transcription factor from Epimedium sagittatum regulates the flavonoid biosynthetic pathway.

    Science.gov (United States)

    Huang, Wenjun; Sun, Wei; Lv, Haiyan; Luo, Ming; Zeng, Shaohua; Pattanaik, Sitakanta; Yuan, Ling; Wang, Ying

    2013-01-01

    Herba epimedii (Epimedium), a traditional Chinese medicine, has been widely used as a kidney tonic and antirheumatic medicine for thousands of years. The bioactive components in herba epimedii are mainly prenylated flavonol glycosides, end-products of the flavonoid pathway. Epimedium species are also used as garden plants due to the colorful flowers and leaves. Many R2R3-MYB transcription factors (TFs) have been identified to regulate the flavonoid and anthocyanin biosynthetic pathways. However, little is known about the R2R3-MYB TFs involved in regulation of the flavonoid pathway in Epimedium. Here, we reported the isolation and functional characterization of the first R2R3-MYB TF (EsMYBA1) from Epimedium sagittatum (Sieb. Et Zucc.) Maxim. Conserved domains and phylogenetic analysis showed that EsMYBA1 belonged to the subgroup 6 clade (anthocyanin-related MYB clade) of R2R3-MYB family, which includes Arabidopsis AtPAP1, apple MdMYB10 and legume MtLAP1. EsMYBA1 was preferentially expressed in leaves, especially in red leaves that contain higher content of anthocyanin. Alternative splicing of EsMYBA1 resulted in three transcripts and two of them encoded a MYB-related protein. Yeast two-hybrid and transient luciferase expression assay showed that EsMYBA1 can interact with several bHLH regulators of the flavonoid pathway and activate the promoters of dihydroflavonol 4-reductase (DFR) and anthocyanidin synthase (ANS). In both transgenic tobacco and Arabidopsis, overexpression of EsMYBA1 induced strong anthocyanin accumulation in reproductive and/or vegetative tissues via up-regulation of the main flavonoid-related genes. Furthermore, transient expression of EsMYBA1 in E. sagittatum leaves by Agrobacterium infiltration also induced anthocyanin accumulation in the wounded area. This first functional characterization of R2R3-MYB TFs in Epimedium species will promote further studies of the flavonoid biosynthesis and regulation in medicinal plants.

  20. Rolling Deck to Repository (R2R): Technical Design - Experiences and Lessons (Invited)

    Science.gov (United States)

    Arko, R. A.; Carbotte, S. M.; Miller, S. P.; Chandler, C. L.; Ferrini, V.; Stocks, K.; Maffei, A. R.; Smith, S. R.; Bourassa, M. A.; McLean, S. J.; Alberts, J. C.

    2009-12-01

    The NSF-funded Rolling Deck to Repository (R2R) project envisions the academic research fleet as an integrated global observing system, with routine “underway” sensor data flowing directly from research vessels to a central shore-side repository. It is a complex endeavor involving many stakeholders - technicians at sea, data managers on shore, ship schedulers, clearance officers, funding agencies, National Data Centers, data synthesis projects, the science community, and the public - working toward a common goal of acquiring, documenting, archiving, evaluating, and disseminating high-quality scientific data. The technical design for R2R is guided by several key principles: 1) The data pipeline is modular, so that initial stages (e.g. inventory and review of data shipments, posting of catalog records and track maps) may proceed routinely for every cruise, while later stages (e.g. quality assessment and production of file-level metadata) may proceed at different rates for different data types; 2) Cruise documentation (e.g. sailing orders, review/release of data inventories, vessel profiles) is gathered primarily via an authenticated Web portal, linked with the UNOLS scheduling database to synchronize vocabularies and eliminate redundancies; and 3) Every data set will be documented and delivered to the appropriate National Data Center for long-term archiving and dissemination after proprietary holds are cleared, while R2R maintains a master cruise catalog that links all the data sets together. This design accommodates the diversity of instrument types, data volumes, and shipment schedules among fleet operators. During its pilot development period, R2R has solicited feedback at community workshops, UNOLS meetings, and conference presentations, including fleet-wide surveys of current practices and instrument inventories. Several vessel operators began submitting cruise data and documentation during the pilot, providing a test bed for database development and Web

  1. Impact of upwelling events on the sea water carbonate chemistry and dissolved oxygen concentration in the Gulf of Papagayo (Culebra Bay, Costa Rica: Implications for coral reefs

    Directory of Open Access Journals (Sweden)

    Tim Rixen

    2012-04-01

    Full Text Available The Gulf of Papagayo, Pacific coast of Costa Rica, is one of the three seasonal upwelling areas of Mesoamerica. In April 2009, a 29-hour experiment was carried out at the pier of the Marina Papagayo, Culebra Bay. We determined sea surface temperature (SST, dissolved oxygen concentration, salinity, pH, and the partial pressure of CO2 (pCO2. The aragonite saturation state (Ωa as well as the other parameters of the marine carbonate system such as the total dissolved inorganic carbon (DIC and the total alkalinity (TA were calculated based on the measured pH and the pCO2. The entrainment of subsurface waters raised the pCO2 up to 645 µatm. SSTs, dissolved oxygen concentrations decreased form 26.4 to 23.7°C and from 228 to 144 µmol l-1. Ωa dropped down to values of 2.1. Although these changes are assumed to reduce the coral growth, the main reef building coral species within the region (Pocillopora spp. and Pavona clavus reveal growth rates exceeding those measured at other sites in the eastern tropical Pacific. This implies that the negative impact of upwelling on coral growth might be overcompensated by an enhanced energy supply caused by the high density of food and nutrients and more favorable condition for coral growth during the non-upwelling season.El Golfo de Papagayo, costa Pacífica de Costa Rica, es una de las tres regiones de afloramiento estacional de Mesoamérica. Las características físicas y químicas del agua que aflora no habían sido estudiadas. Durante 29 horas en Abril 2009, se estudiaron la temperatura superficial del mar (TSM, la concentración de oxígeno disuelto, salinidad, pH y la presión parcial de CO2 (pCO2, en la Marina Papagayo, Bahía Culebra. Con base en las mediciones de pH y pCO2 se calculó el estado de saturación de la aragonita (Ω y otros parámetros del sistema de carbonatos como lo es el carbono orgánico disuelto (COD y la alcalinidad total (AT. Los resultados indican que el arrastre por convecci

  2. Decommissioning of the Nuclear Reactors R2 and R2-0 at Studsvik, Sweden. General Data as called for under Article 37 of the Euratom Treaty

    Energy Technology Data Exchange (ETDEWEB)

    2009-01-15

    This document describes the plans for decommissioning of the nuclear research and material test reactors R2 and R2-0, situated at the Studsvik site close to the city of Nykoeping, Sweden. The purpose of the document is to serve as information for the European Commission, and to fulfil the requirements of Article 37 of the Euratom Treaty. Studsvik is situated on the Baltic coast, about 20 km east of Nykoeping and 80 km southwest of Stockholm. The site comprises the reactors R2 and R2-0 and several facilities for material investigation and radioactive waste treatment and storage. The reactors were used for a number of different purposes from 1960 until June 2005, when they were shut down following a decision by the operator. Decommissioning of the reactor facility is planned to be completed in 2016 after dismantling and conditioning of radioactive parts and demolition of the facility. Solid and liquid radioactive wastes from the dismantling activities will be treated and stored on-site awaiting final disposal. The waste treatment facilities, which are situated in other buildings at the Studsvik site, are planned to continue operation during and after the decommissioning of the reactor facility. All nuclear fuel has been transferred to a separate storage facility and is being shipped to the US according to existing agreements. The objective of the planned dismantling activities is to achieve clearance of the facility to make it possible to either demolish the buildings or use them for other purposes. The operator has divided the planning for dismantling and demolition of the facility into three phases [1]: Dismantling 1, including primary system decontamination, dismantling of the reactors with systems in the reactor pool, draining, cleaning and temporary covering of the reactor pool. This phase has begun and is due to last till approximately December 2009. Dismantling 2, including dismantling of systems in the reactor facility, removal of equipment, radiological

  3. Transport of terrigenous polycyclic aromatic hydrocarbons affected by the coastal upwelling in the northwestern coast of South China Sea.

    Science.gov (United States)

    Ya, Miaolei; Wu, Yuling; Li, Yongyu; Wang, Xinhong

    2017-10-01

    Coastal upwelling prevails in the coast of Hainan Island, the northern South China Sea (SCS) during summer. We studied the influences of the upwelling on the horizontal and vertical transport of terrigenous polycyclic aromatic hydrocarbons (PAHs). PAHs in dissolved and suspended particulate phase of water samples were determined in the upper (depth  10 m). PAH levels decreased sharply from inshore to offshore to open sea. The results showed that terrestrial input was the main source of coastal PAHs. Perylene, an important indicator of land plant-derived PAH, showed the significant correlation with PAHs (p sea. Copyright © 2017 Elsevier Ltd. All rights reserved.

  4. Anoxic sediments off Central Peru record interannual to multidecadal changes of climate and upwelling ecosystem during the last two centuries

    Science.gov (United States)

    Gutiérrez, D.; Sifeddine, A.; Reyss, J. L.; Vargas, G.; Velazco, F.; Salvatteci, R.; Ferreira, V.; Ortlieb, L.; Field, D.; Baumgartner, T.; Boussafir, M.; Boucher, H.; Valdés, J.; Marinovic, L.; Soler, P.; Tapia, P.

    2006-01-01

    High-resolution paleo-environmental and paleo-ecological archives in laminated sequences are present in selected areas from the upper continental Peruvian margin within the oxygen minimum zone. We present initial results of a multidisciplinary study (the PALEOPECES project) that aims to reconstruct environmental and ecosystem variability during the past 200 years from high-resolution records. We report chronology development, sediment structure, elemental, organic, and mineralogical compositions of a box core collected at 300 m depth off Pisco, central Peru. An average sedimentation rate of 2.2 mm y-1 was estimated from downcore excess 210Pb activities for the last 100-150 years. Extending this rate further downcore indicates that a slump located at 52 cm depth from the top of the core can be correlated with a large tsunami that struck the coast of central Peru in 1746. X-ray analyses reveal laminated structures composed of couplets of light and dark laminae. Observations under polarized microscope show that light laminae are dominated by more dense, detrital and terrigenous material, while dark laminae are less dense with greater concentrations of amorphous biogenic silica. Downcore variations in dry bulk density and X-ray radioscopy of gray level show similar patterns, including a major shift at 34 cm depth (ca. mid-nineteenth century). A finely laminated sequence, which may include annual varves, is present between 34 cm depth and the slump layer. Sediment characteristics of the sequence suggest increased seasonality of terrigenous versus biogenous sedimentation during the corresponding period. In addition to a mid-nineteenth century change and considerable multidecadal variability in TOC, there is a positive trend in the past 50 years. Mineralogical analyses from a Fourier Transformed Infrared Spectroscopy (FTIR) of the upper core covering the last 25 years, indicate higher concentrations of the mineral fraction (quartz, feldspar, kaolinite and illite) in

  5. Anoxic sediments off Central Peru record interannual to multidecadal changes of climate and upwelling ecosystem during the last two centuries

    Directory of Open Access Journals (Sweden)

    D. Gutiérrez

    2006-01-01

    Full Text Available High-resolution paleo-environmental and paleo-ecological archives in laminated sequences are present in selected areas from the upper continental Peruvian margin within the oxygen minimum zone. We present initial results of a multidisciplinary study (the PALEOPECES project that aims to reconstruct environmental and ecosystem variability during the past 200 years from high-resolution records. We report chronology development, sediment structure, elemental, organic, and mineralogical compositions of a box core collected at 300 m depth off Pisco, central Peru. An average sedimentation rate of 2.2 mm y-1 was estimated from downcore excess 210Pb activities for the last 100-150 years. Extending this rate further downcore indicates that a slump located at 52 cm depth from the top of the core can be correlated with a large tsunami that struck the coast of central Peru in 1746. X-ray analyses reveal laminated structures composed of couplets of light and dark laminae. Observations under polarized microscope show that light laminae are dominated by more dense, detrital and terrigenous material, while dark laminae are less dense with greater concentrations of amorphous biogenic silica. Downcore variations in dry bulk density and X-ray radioscopy of gray level show similar patterns, including a major shift at 34 cm depth (ca. mid-nineteenth century. A finely laminated sequence, which may include annual varves, is present between 34 cm depth and the slump layer. Sediment characteristics of the sequence suggest increased seasonality of terrigenous versus biogenous sedimentation during the corresponding period. In addition to a mid-nineteenth century change and considerable multidecadal variability in TOC, there is a positive trend in the past 50 years. Mineralogical analyses from a Fourier Transformed Infrared Spectroscopy (FTIR of the upper core covering the last 25 years, indicate higher concentrations of the mineral fraction (quartz, feldspar, kaolinite and

  6. Sardine (sardina Pilchardus) Larval Dispersal in Northern Canary Current Upwelling System (iberian Peninsula), Using Coupled Biophysical Techniques

    Science.gov (United States)

    Santos, A. M. P. A.; Nieblas, A. E.; Verley, P.; Teles-Machado, A.; Bonhommeau, S.; Lett, C.; Garrido, S.; Peliz, A.

    2017-12-01

    The European sardine (Sardina pilchardus) is the most important small pelagic fishery of the Western Iberia Upwelling Ecosystem (WIUE). Recently, recruitment of this species has declined due to changing environmental conditions. Furthermore, controversies exist regarding its population structure with barriers thought to exist between the Atlantic-Iberian Peninsula, Northern Africa, and the Mediterranean. Few studies have investigated the transport and dispersal of sardine eggs and larvae off Iberia and the subsequent impact on larval recruitment variability. Here, we examine these issues using a Regional Ocean Modeling System climatology (1989-2008) coupled to the Lagrangian transport model, Ichthyop. Using biological parameters from the literature, we conduct simulations that investigate the effects of spawning patchiness, diel vertical migration behaviors, and egg buoyancy on the transport and recruitment of virtual sardine ichthyoplankton on the continental shelf. We find that release area, release depth, and month of release all significantly affect recruitment. Patchiness has no effect and diel vertical migration causes slightly lower recruitment. Egg buoyancy effects are significant and act similarly to depth of release. As with other studies, we find that recruitment peaks vary by latitude, explained here by the seasonal variability of offshore transport. We find weak, continuous alongshore transport between release areas, though a large proportion of simulated ichthyoplankton transport north to the Cantabrian coast (up to 27%). We also show low level transport into Morocco (up to 1%) and the Mediterranean (up to 8%). The high proportion of local retention and low but consistent alongshore transport supports the idea of a series of metapopulations along this coast. This study was supported by the Portuguese Science and Technology Foundation (FCT) through the research project MODELA (PTDC/MAR/098643/2008) and MedEx (MARIN-ERA/MAR/0002/2008). MedEx is also a

  7. Development of a simple measurement method for GluR2 protein expression as an index of neuronal vulnerability

    Directory of Open Access Journals (Sweden)

    Chihiro Sugiyama

    2015-01-01

    Full Text Available In vitro estimating strategies for potential neurotoxicity are required to screen multiple substances. In a previous study, we showed that exposure to low-concentrations of some chemicals, such as organotin, decreased the expression of GluR2 protein, which is a subunit of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid (AMPA-type glutamate receptors, and led to neuronal vulnerability. This result suggested that GluR2 decreases as an index of neuronal cell sensitivity and vulnerability to various toxic insults. Accordingly, we developed a versatile method that is a large scale determination of GluR2 protein expression in the presence of environmental chemicals by means of AlphaLISA technology. Various analytical conditions were optimized, and then GluR2 protein amount was measured by the method using AlphaLISA. The GluR2 amounts were strongly correlated with that of measured by western blotting, which is currently used to determine GluR2 expression. An ideal standard curve could be written with the authentic GluR2 protein from 0 ng to 100 ng. Subsequently, twenty environmental chemicals were screened and nitenpyram was identified as a chemical which lead to decrease in GluR2 protein expression. This assay may provide a tool for detecting neurotoxic chemicals according to decreases in GluR2 protein expression.

  8. R-2HG Exhibits Anti-tumor Activity by Targeting FTO/m6A/MYC/CEBPA Signaling.

    Science.gov (United States)

    Su, Rui; Dong, Lei; Li, Chenying; Nachtergaele, Sigrid; Wunderlich, Mark; Qing, Ying; Deng, Xiaolan; Wang, Yungui; Weng, Xiaocheng; Hu, Chao; Yu, Mengxia; Skibbe, Jennifer; Dai, Qing; Zou, Dongling; Wu, Tong; Yu, Kangkang; Weng, Hengyou; Huang, Huilin; Ferchen, Kyle; Qin, Xi; Zhang, Bin; Qi, Jun; Sasaki, Atsuo T; Plas, David R; Bradner, James E; Wei, Minjie; Marcucci, Guido; Jiang, Xi; Mulloy, James C; Jin, Jie; He, Chuan; Chen, Jianjun

    2018-01-11

    R-2-hydroxyglutarate (R-2HG), produced at high levels by mutant isocitrate dehydrogenase 1/2 (IDH1/2) enzymes, was reported as an oncometabolite. We show here that R-2HG also exerts a broad anti-leukemic activity in vitro and in vivo by inhibiting leukemia cell proliferation/viability and by promoting cell-cycle arrest and apoptosis. Mechanistically, R-2HG inhibits fat mass and obesity-associated protein (FTO) activity, thereby increasing global N 6 -methyladenosine (m 6 A) RNA modification in R-2HG-sensitive leukemia cells, which in turn decreases the stability of MYC/CEBPA transcripts, leading to the suppression of relevant pathways. Ectopically expressed mutant IDH1 and S-2HG recapitulate the effects of R-2HG. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. Collectively, while R-2HG accumulated in IDH1/2 mutant cancers contributes to cancer initiation, our work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO-high cancer cells via targeting FTO/m 6 A/MYC/CEBPA signaling. Copyright © 2017 Elsevier Inc. All rights reserved.

  9. Sorting Out Seasonal Allergies

    Science.gov (United States)

    ... Close ‹ Back to Healthy Living Sorting Out Seasonal Allergies Sneezing, runny nose, nasal congestion. Symptoms of the ... How do I know if I have seasonal allergies? According to Dr. Georgeson, the best way to ...

  10. Mercury speciation in fish of the Cabo Frio upwelling region, SE-Brazil

    Directory of Open Access Journals (Sweden)

    Carlos Alberto da Silva

    2011-09-01

    Full Text Available Mercury distribution in the oceans is controlled by complex biogeochemical cycles, resulting in retention of trace amounts of this metal in marine biota. The impact of upwelling processes in this metal behavior has been overlooked. Data from literature are insufficient to evaluate the risks associated with the presence of mercury in the fish collected in upwelling areas and its consumers. Therefore, the aim of the present work was to perform a study of mercury speciation in four fish species belonging to different trophic levels from Cabo Frio-Brazil upwelling region. The total mercury content vary of 53 ng g-1 (Sardinella brasiliensis -sardine to 1215 ng g-1 (Cynoscion striatus -striped weakfish and, with exception of the planktivorous fish, methylmercury levels reaches circa 90% of total mercury concentration.A distribuição de Mercúrio nos oceanos é controlada por um complexo ciclo biogeoquímico, resultando na retenção de pequenas quantidades na biota marinha. O impacto dos processos de ressurgência costeira no comportamento desse metal tem sido negligenciado. Dados da literatura são insuficientes para elucidar o risco associado com a presença de mercúrio em peixes capturados em áreas de ressurgência e seus consumidores. Portanto o objetivo do presente trabalho foi realizar um estudo de especiação de mercúrio em quatro espécies de peixes pertencentes a diferentes níveis tróficos da região de ressurgência de Cabo Frio-Brasil. O conteúdo total de mercúrio variou de 53 ng g-1 (Sardinella brasiliensis -sardinha to 1215 ng g-1 (Cynoscion striatus -pescada e, com exceção da espécie planctivora, os níveis de metilmercúrio atingem cerca de 90% da concentração total de mercúrio.

  11. Upwelling to Outflowing Oxygen Ions at Auroral Latitudes during Quiet Times: Exploiting a New Satellite Database

    Science.gov (United States)

    Redmon, Robert J.

    The mechanisms by which thermal O+ escapes from the top of the ionosphere and into the magnetosphere are not fully understood even with 30 years of active research. This thesis introduces a new database, builds a simulation framework around a thermospheric model and exploits these tools to gain new insights into the study of O+ ion outflows. A dynamic auroral boundary identification system is developed using Defense Meteorological Satellite Program (DMSP) spacecraft observations at 850 km to build a database characterizing the oxygen source region. This database resolves the ambiguity of the expansion and contraction of the auroral zone. Mining this new dataset, new understanding is revealed. We describe the statistical trajectory of the cleft ion fountain return flows over the polar cap as a function of activity and the orientation of the interplanetary magnetic field y-component. A substantial peak in upward moving O+ in the morning hours is discovered. Using published high altitude data we demonstrate that between 850 and 6000 km altitude, O+ is energized predominantly through transverse heating; and acceleration in this altitude region is relatively more important in the cusp than at midnight. We compare data with a thermospheric model to study the effects of solar irradiance, electron precipitation and neutral wind on the distribution of upward O+ at auroral latitudes. EUV irradiance is shown to play a dominant role in establishing a dawn-focused source population of upwelling O+ that is responsible for a pre-noon feature in escaping O+ fluxes. This feature has been corroborated by observations on platforms including the Dynamics Explorer 1 (DE-1), Polar, and Fast Auroral Snapshot SnapshoT (FAST) spacecraft. During quiet times our analysis shows that the neutral wind is more important than electron precipitation in establishing the dayside O+ upwelling distribution. Electron precipitation is found to play a relatively modest role in controlling dayside, and a

  12. Diurnal variability of inner-shelf circulation in the lee of a cape under upwelling conditions

    Science.gov (United States)

    Lamas, L.; Peliz, A.; Dias, J.; Oliveira, P. B.; Angélico, M. M.; Castro, J. J.; Fernandes, J. N.; Trindade, A.; Cruz, T.

    2017-07-01

    The nearshore circulation in the lee of a cape under upwelling conditions was studied using in-situ data from 3 consecutive summers (2006-2008). Focus was given to a period between 20 July and 04 August 2006 to study the diurnal variability of the cross-shelf circulation. This period was chosen because it had a steady upwelling-favourable wind condition modulated by a diurnal cycle much similar to sea breeze. The daily variability of the observed cross-shelf circulation consisted of three distinct periods: a morning period with a 3-layer vertical structure with onshore velocities at mid-depth, a mid-day period where the flow is reversed and has a 2-layer structure with onshore velocities at the surface and offshore flow below, and, lastly, in the evening, a 2-layer period with intensified offshore velocities at the surface and onshore flow at the bottom. The observed cross-shelf circulation showed a peculiar vertical shape and diurnal variability different from several other systems described in literature. We hypothesize that the flow reversal of the cross-shelf circulation results as a response to the rapid change of the wind magnitude and direction at mid-day with the presence of the cape north of the mooring site influencing this response. A numerical modelling experiment exclusively forced by winds simulated successfully most of the circulation at the ADCP site, especially the mid-day reversal and the evening's upwelling-type structure. This supports the hypothesis that the cross-shelf circulation at diurnal timescales is mostly wind-driven. By analysing the 3D circulation in the vicinity of Cape Sines we came to the conclusion that the diurnal variability of the wind and the flow interaction with topography are responsible for the circulation variability at the ADCP site, though only a small region in the south of the cape showed a similar diurnal variability. The fact that the wind diurnally undergoes relaxation and intensification strongly affects the

  13. Seasonal Allergies (Hay Fever)

    Science.gov (United States)

    ... Safe Videos for Educators Search English Español Seasonal Allergies (Hay Fever) KidsHealth / For Parents / Seasonal Allergies (Hay ... español Alergia estacional (fiebre del heno) About Seasonal Allergies "Achoo!" It's your son's third sneezing fit of ...

  14. Seasonal Variation in Epidemiology

    Science.gov (United States)

    Marrero, Osvaldo

    2013-01-01

    Seasonality analyses are important in medical research. If the incidence of a disease shows a seasonal pattern, then an environmental factor must be considered in its etiology. We discuss a method for the simultaneous analysis of seasonal variation in multiple groups. The nuts and bolts are explained using simple trigonometry, an elementary…

  15. The onion (Allium cepa L. R2R3-MYB gene MYB1 regulates anthocyanin biosynthesis

    Directory of Open Access Journals (Sweden)

    Kathy Schwinn

    2016-12-01

    Full Text Available Bulb colour is an important consumer trait for onion (Allium cepa L., Allioideae, Asparagales. The bulbs accumulate a range of flavonoid compounds, including anthocyanins (red, flavonols (pale yellow and chalcones (bright yellow. Flavonoid regulation is poorly characterised in onion and in other plants belonging to the Asparagales, despite being a major plant order containing many important crop and ornamental species. R2R3-MYB transcription factors associated with the regulation of distinct branches of the flavonoid pathway were isolated from onion. These belonged to sub-groups (SGs that commonly activate anthocyanin (SG6, MYB1 or flavonol (SG7, MYB29 production, or repress phenylpropanoid/flavonoid synthesis (SG4, MYB4, MYB5. MYB1 was demonstrated to be a positive regulator of anthocyanin biosynthesis by the induction of anthocyanin production in onion tissue when transiently overexpressd and by reduction of pigmentation when transiently repressed via RNAi. Furthermore, ectopic red pigmentation was observed in garlic (A. sativum L. plants stably transformed with a construct for co-overexpression of MYB1 and a bHLH partner. MYB1 also was able to complement the acyanic petal phenotype of a defined R2R3-MYB anthocyanin mutant in Antirrhinum majus of the asterid clade of eudicots. The availability of sequence information for flavonoid-related MYBs from onion enabled phylogenetic groupings to be determined across monocotyledonous and dicotyledonous species, including the identification of characteristic amino acid motifs. This analysis suggests that divergent evolution of the R2R3-MYB family has occurred between Poaceae/Orchidaceae and Allioideae species. The DNA sequences identified will be valuable for future analysis of classical flavonoid genetic loci in Allium crops and will assist the breeding of these important crop species.

  16. The Onion (Allium cepa L.) R2R3-MYB Gene MYB1 Regulates Anthocyanin Biosynthesis

    Science.gov (United States)

    Schwinn, Kathy E.; Ngo, Hanh; Kenel, Fernand; Brummell, David A.; Albert, Nick W.; McCallum, John A.; Pither-Joyce, Meeghan; Crowhurst, Ross N.; Eady, Colin; Davies, Kevin M.

    2016-01-01

    Bulb color is an important consumer trait for onion (Allium cepa L., Allioideae, Asparagales). The bulbs accumulate a range of flavonoid compounds, including anthocyanins (red), flavonols (pale yellow), and chalcones (bright yellow). Flavonoid regulation is poorly characterized in onion and in other plants belonging to the Asparagales, despite being a major plant order containing many important crop and ornamental species. R2R3-MYB transcription factors associated with the regulation of distinct branches of the flavonoid pathway were isolated from onion. These belonged to sub-groups (SGs) that commonly activate anthocyanin (SG6, MYB1) or flavonol (SG7, MYB29) production, or repress phenylpropanoid/flavonoid synthesis (SG4, MYB4, MYB5). MYB1 was demonstrated to be a positive regulator of anthocyanin biosynthesis by the induction of anthocyanin production in onion tissue when transiently overexpressed and by reduction of pigmentation when transiently repressed via RNAi. Furthermore, ectopic red pigmentation was observed in garlic (Allium sativum L.) plants stably transformed with a construct for co-overexpression of MYB1 and a bHLH partner. MYB1 also was able to complement the acyanic petal phenotype of a defined R2R3-MYB anthocyanin mutant in Antirrhinum majus of the asterid clade of eudicots. The availability of sequence information for flavonoid-related MYBs from onion enabled phylogenetic groupings to be determined across monocotyledonous and dicotyledonous species, including the identification of characteristic amino acid motifs. This analysis suggests that divergent evolution of the R2R3-MYB family has occurred between Poaceae/Orchidaceae and Allioideae species. The DNA sequences identified will be valuable for future analysis of classical flavonoid genetic loci in Allium crops and will assist the breeding of these important crop species. PMID:28018399

  17. Kinematic Study of Ionized and Molecular Gases in Ultracompact HII Region in Monoceros R2

    Science.gov (United States)

    Kim, Hwihyun; Lacy, John H.; Jaffe, Daniel Thomas

    2017-06-01

    Monoceros R2 (Mon R2) is an UltraCompact HII region (UCHII) surrounded by several PhotoDissociation Regions (PDRs). It is an excellent example to investigate the chemistry and physics of early stage of massive star formation due to its proximity (830pc) and brightness. Previous studies suggest that the wind from the star holds the ionized gas up against the dense molecular core and the higher pressure at the head drives the ionized gas along the shell. In order for the model to work, there should be evidence for dense molecular gas along the shell walls, irradiated by the UCHII region and perhaps entrained into the flow along the walls.We obtained the Immersion Grating INfrared Spectrograph (IGRINS) spectra of Mon R2 to study the kinematic patterns in the areas where ionized and molecular gases interact. The position-velocity maps from the high resolution (R~45,000) H- and K-band (1.4-2.5μm) IGRINS spectra demonstrate that the ionized gases (Brackett and Pfund series, He and Fe emission lines; Δv ≈ 40km/s) flow along the walls of the surrounding clouds. This is consistent with the model by Zhu et al. (2008). In the PV maps of the H2 emission lines there is no obvious motion (Δv ≈ 10km/s) of the molecular hydrogen right at the ionization boundary. This implies that the molecular gas is not taking part in the flow as the ionized gas is moving along the cavity walls.This work used the Immersion Grating Infrared Spectrograph (IGRINS) that was developed under a collaboration between the University of Texas at Austin and the Korea Astronomy and Space Science Institute (KASI) with the financial support of the US National Science Foundation (NSF; grant AST-1229522), of the University of Texas at Austin, and of the Korean GMTProject of KASI.

  18. The Onion (Allium cepa L.) R2R3-MYB Gene MYB1 Regulates Anthocyanin Biosynthesis.

    Science.gov (United States)

    Schwinn, Kathy E; Ngo, Hanh; Kenel, Fernand; Brummell, David A; Albert, Nick W; McCallum, John A; Pither-Joyce, Meeghan; Crowhurst, Ross N; Eady, Colin; Davies, Kevin M

    2016-01-01

    Bulb color is an important consumer trait for onion ( Allium cepa L., Allioideae, Asparagales). The bulbs accumulate a range of flavonoid compounds, including anthocyanins (red), flavonols (pale yellow), and chalcones (bright yellow). Flavonoid regulation is poorly characterized in onion and in other plants belonging to the Asparagales, despite being a major plant order containing many important crop and ornamental species. R2R3-MYB transcription factors associated with the regulation of distinct branches of the flavonoid pathway were isolated from onion. These belonged to sub-groups (SGs) that commonly activate anthocyanin (SG6, MYB1) or flavonol (SG7, MYB29) production, or repress phenylpropanoid/flavonoid synthesis (SG4, MYB4, MYB5). MYB1 was demonstrated to be a positive regulator of anthocyanin biosynthesis by the induction of anthocyanin production in onion tissue when transiently overexpressed and by reduction of pigmentation when transiently repressed via RNAi. Furthermore, ectopic red pigmentation was observed in garlic ( Allium sativum L.) plants stably transformed with a construct for co-overexpression of MYB1 and a bHLH partner. MYB1 also was able to complement the acyanic petal phenotype of a defined R2R3-MYB anthocyanin mutant in Antirrhinum maju s of the asterid clade of eudicots. The availability of sequence information for flavonoid-related MYBs from onion enabled phylogenetic groupings to be determined across monocotyledonous and dicotyledonous species, including the identification of characteristic amino acid motifs. This analysis suggests that divergent evolution of the R2R3-MYB family has occurred between Poaceae/Orchidaceae and Allioideae species. The DNA sequences identified will be valuable for future analysis of classical flavonoid genetic loci in Allium crops and will assist the breeding of these important crop species.

  19. Neutron scattering study on R2PdSi3 (R=Ho,Er,Tm) compounds

    International Nuclear Information System (INIS)

    Tang, Fei

    2010-01-01

    Previous studies on the family of inter-metallic rare-earth compounds R 2 PdSi 3 revealed multifaceted magnetic properties, for instance, spin-glass like behavior. Experimental observations include: Signs of a crystallographic superstructure, complicated magnetic structures both in zero field and in applied magnetic fields as well as a generic phase in applied fields for compounds in the series with the heavy rare-earths R=Gd, Tb, Dy, Ho, Er and Tm. This thesis expands the studies on the magnetic properties of R 2 PdSi 3 employing mainly neutron scattering on single crystals with the focus on the compounds with R=Ho, Er and Tm. A detailed analysis of the crystallographic superstructure using modulation wave approach and group theory is presented. The resulting structure implies the existence of two different rare-earth sites with reduced symmetry and an arrangement of the different sites according to sequences as determined by the superstructure. It is shown that the reduced symmetry of the rare-earth sites is explicitly observed in the energy spectra of inelastic neutron scattering. The results on the magnetic structures and excitations are shown and discussed in the framework of the superstructure model. Specifically the generic phase in applied fields is interpreted as a direct consequence of the crystallographic superstructure. It is rather unusual that a crystallographic superstructure is playing such a decisive, and through the field dependence also tunable role in determining the magnetic properties as observed in R 2 PdSi 3 . The mediating interactions between the crystallographic part and the magnetic part of the system are discussed. (orig.)

  20. Predictive power of Brazilian equity fund performance using R2 as a measure of selectivity

    Directory of Open Access Journals (Sweden)

    Marcelo dos Santos Guzella

    2017-03-01

    Full Text Available ABSTRACT This paper aimed to investigate the impact of levels of selectivity on the performance of equity funds using a methodology applied for the first time ever (as far as we know in the Brazilian market. As an indicator of the activity level of a fund, we proposed the coefficient of determination (R2 of the regression of its returns over market returns. In total, 867 funds were analyzed in the period between November 2004 and October 2014. The hypothesis tested is that more selective funds perform better to compensate for their higher operating costs. This hypothesis was confirmed in the Brazilian market. Dynamic equally-weighted portfolios of funds were simulated, according to their past R2 and alphas, with monthly rebalancing and 12-month moving windows. The portfolio of the most selective funds had a Sharpe ratio of 0.0494, on a monthly basis, while the portfolio of the least selective funds had a Sharpe ratio of -0.0314. Performance was also higher in evaluations involving excess returns, Jensen’s alpha, and accumulated returns, as well as when compared to randomly selected portfolios. Moreover, past performance (as measured by Jensen’s alpha was also a predictor of future performance. Particularly, the portfolio composed by funds with a higher past alpha and lower past R2 presented a Sharpe ratio of 0.1483 and a Jensen’s alpha of 0.87% (significant at 1%, while the one composed of funds with a lower past alpha and lower activity level presented a Sharpe ratio of -0.0673 and an alpha of -0.32% (also significant at 1%.

  1. R2WinBUGS: A Package for Running WinBUGS from R

    Directory of Open Access Journals (Sweden)

    Sibylle Sturtz

    2005-01-01

    Full Text Available The R2WinBUGS package provides convenient functions to call WinBUGS from R. It automatically writes the data and scripts in a format readable by WinBUGS for processing in batch mode, which is possible since version 1.4. After the WinBUGS process has finished, it is possible either to read the resulting data into R by the package itself--which gives a compact graphical summary of inference and convergence diagnostics--or to use the facilities of the coda package for further analyses of the output. Examples are given to demonstrate the usage of this package.

  2. Power measurement in the boiling capsules in R2 using delayed neutron detector

    International Nuclear Information System (INIS)

    Roennberg, G.

    1979-03-01

    LWR fuel testing is performed in the R2 reactor by irradiation in both loops and so-called boiling capsules. The loops have forced cooling, and the power can be measured calorimetrically by conventional instrumentation. The boiling capsules have convection cooling, and it has therefore been necessary to develop a special technique for power measurement, the delayed neutron detector (DND). The DND is a pneumatic rabbit system, which activates small uranium samples in the boiling capsules and counts the delayed neutrons for determination of the fission rate. This report describes the equipment used, the procedure of measurement, and the method of evaluation. (atuhor)

  3. Recursion Formulae for Obtaining Surfaces with Constant Mean Curvature in R2,1

    International Nuclear Information System (INIS)

    Tian Yongbo; Nan Zhijie; Tian Chou

    2007-01-01

    Though the Baecklund transformation on time-like surfaces with constant mean curvature surfaces in R 2,1 has been obtained, it is not easy to obtain corresponding surfaces because the procedure of solving the related integrable system cannot be avoided when the Baecklund transformation is used. For sake of this, in this article, some special work is done to reform the Baecklund transformation to a recursion formula, by which we can construct time-like surfaces with constant mean curvature form known ones just by quadrature procedure.

  4. Site-specific magnetic anisotropies in R2Fe14B systems

    Science.gov (United States)

    Yoshioka, T.; Tsuchiura, H.

    2018-04-01

    The local magnetic anisotropy of R ions in R2Fe14B (R = Dy, Ho) systems is studied based on a microscopic effective spin model constructed from the information obtained by using first-principles calculations. By taking into account up to 6-th order crystal electric field parameters, the model satisfactory describes the observed magnetization curves and the temperature dependence of anisotropy constants. We found that at low temperatures, the noncollinear structure appears in the Ho2Fe14B system reflecting the local magnetic anisotropy.

  5. Nationwide experience of catecholaminergic polymorphic ventricular tachycardia caused by RyR2 mutations

    DEFF Research Database (Denmark)

    Broendberg, Anders Krogh; Nielsen, Jens Cosedis; Bjerre, Jesper

    2017-01-01

    probands, 18 symptomatic and 10 asymptomatic relatives with a RyR2 mutation. Twenty (87%) probands and 10 (36%) relatives had severe presenting symptoms (sudden cardiac death (SCD), aborted SCD (ASCD) or syncope).As compared with symptomatic relatives, probands had lower age at onset of symptoms (16 years...... (IQR, 10-33) vs 43 years (IQR, 25-54), pnear-fatal events (ASCD, SCD) (16vs5, p... events in the majority of probands and also occurred in 36% of relatives identified through family screening. Probands were younger at disease onset and more prone to fatal or near-fatal events than relatives....

  6. Degradation and stability of R2R manufactured polymer solar cells

    DEFF Research Database (Denmark)

    Norrman, Kion; Krebs, Frederik C

    2009-01-01

    Polymer solar cells have many advantages such as light weight, flexibility, environmental friendliness, low thermal budget, low cost and most notably very fast modes of production by printing techniques. Production experiments have shown that it is highly feasible with existing technology to mass...... produce polymer solar cells at a very low cost. We have employed state-of-the-art analytical techniques to address the challenging issues of degradation and stability of R2R manufactured devices. We have specifically studied the relative effect of oxygen and water on the operational devices in regard...

  7. Rolling Deck to Repository (R2R): Linking and Integrating Data for Oceanographic Research

    Science.gov (United States)

    Arko, R. A.; Chandler, C. L.; Clark, P. D.; Shepherd, A.; Moore, C.

    2012-12-01

    The Rolling Deck to Repository (R2R) program is developing infrastructure to ensure the underway sensor data from NSF-supported oceanographic research vessels are routinely and consistently documented, preserved in long-term archives, and disseminated to the science community. We have published the entire R2R Catalog as a Linked Data collection, making it easily accessible to encourage linking and integration with data at other repositories. We are developing the R2R Linked Data collection with specific goals in mind: 1.) We facilitate data access and reuse by providing the richest possible collection of resources to describe vessels, cruises, instruments, and datasets from the U.S. academic fleet, including data quality assessment results and clean trackline navigation. We are leveraging or adopting existing community-standard concepts and vocabularies, particularly concepts from the Biological and Chemical Oceanography Data Management Office (BCO-DMO) ontology and terms from the pan-European SeaDataNet vocabularies, and continually re-publish resources as new concepts and terms are mapped. 2.) We facilitate data citation through the entire data lifecycle from field acquisition to shoreside archiving to (ultimately) global syntheses and journal articles. We are implementing globally unique and persistent identifiers at the collection, dataset, and granule levels, and encoding these citable identifiers directly into the Linked Data resources. 3.) We facilitate linking and integration with other repositories that publish Linked Data collections for the U.S. academic fleet, such as BCO-DMO and the Index to Marine and Lacustrine Geological Samples (IMLGS). We are initially mapping datasets at the resource level, and plan to eventually implement rule-based mapping at the concept level. We work collaboratively with partner repositories to develop best practices for URI patterns and consensus on shared vocabularies. The R2R Linked Data collection is implemented as a

  8. Rolling Deck to Repository (R2R): Big Data and Standard Services for the Fleet Community

    Science.gov (United States)

    Arko, R. A.; Carbotte, S. M.; Chandler, C. L.; Smith, S. R.; Stocks, K. I.

    2014-12-01

    The Rolling Deck to Repository (R2R; http://rvdata.us/) program curates underway environmental sensor data from the U.S. academic oceanographic research fleet, ensuring data sets are routinely and consistently documented, preserved in long-term archives, and disseminated to the science community. Currently 25 in-service vessels contribute 7 terabytes of data to R2R each year, acquired from a full suite of geophysical, oceanographic, meteorological, and navigational sensors on over 400 cruises worldwide. To accommodate this large volume and variety of data, R2R has developed highly efficient stewardship procedures. These include scripted "break out" of cruise data packages from each vessel based on standard filename and directory patterns; automated harvest of cruise metadata from the UNOLS Office via Web Services and from OpenXML-based forms submitted by vessel operators; scripted quality assessment routines that calculate statistical summaries and standard ratings for selected data types; adoption of community-standard controlled vocabularies for vessel codes, instrument types, etc, provided by the NERC Vocabulary Server, in lieu of maintaining custom local term lists; and a standard package structure based on the IETF BagIt format for delivering data to long-term archives. Documentation and standard post-field products, including quality-controlled shiptrack navigation data for every cruise, are published in multiple services and formats to satisfy a diverse range of clients. These include Catalog Service for Web (CSW), GeoRSS, and OAI-PMH discovery services via a GeoNetwork portal; OGC Web Map and Feature Services for GIS clients; a citable Digital Object Identifier (DOI) for each dataset; ISO 19115-2 standard geospatial metadata records suitable for submission to long-term archives as well as the POGO global catalog; and Linked Open Data resources with a SPARQL query endpoint for Semantic Web clients. R2R participates in initiatives such as the Ocean Data

  9. Evaluation of ERA-Interim, MERRA, NCEP-DOE R2 and CFSR Reanalysis precipitation Data using Gauge Observation over Ethiopia for a period of 33 years

    Directory of Open Access Journals (Sweden)

    Tewodros Woldemariam Tesfaye

    2017-09-01

    Full Text Available The vital demand of reliable climatic and hydrologic data of fine spatial and temporal resolution triggered the employment of reanalysis datasets as a surrogate in most of the hydrological modelling exercises. This study examines the performance of four widely used reanalysis datasets: ERA-Interim, NCEP-DOE R2, MERRA and CFSR, in reproducing the spatio-temporal characteristics of observed daily precipitation of different stations spread across Ethiopia, East Africa. The appropriateness of relying on reanalysis datasets for hydrologic modelling, climate change impact assessment and regional modelling studies is assessed using various statistical and non-parametric techniques. ERA-Interim is found to exhibit higher correlation and least root mean square error values with observed daily rainfall, which is followed by CFSR and MERRA in most of the stations. The variability of daily precipitation is better captured by ERA, CFSR and MERRA, while NCEP-DOE R2 overestimated the spread of the precipitation data. While ERA overestimates the probability of moderate rainfall, it is seemingly better in capturing the probability of low rainfall. CFSR captures the overall distribution reasonable well. NCEP-DOE R2 appears to be outperforming others in capturing the probabilities of higher magnitude rainfall. Climatological seasonal cycle and the characteristics of wet and dry spells are compared further, where ERA seemingly replicates the pattern more effectively. However, observed rainfall exhibits higher frequency of short wet spells when compared to that of any reanalysis datasets. MERRA relatively underperforms in simulating the wet spell characteristics of observed daily rainfall. CFSR overestimates the mean wet spell length and mean dry spell length. Spatial trend analysis indicates that the northern and central western Ethiopia show increasing trends, whereas the Central and Eastern Ethiopia as well as the Southern Ethiopia stations show either no trend

  10. A statistical approach to coastal upwelling in the Baltic Sea based on the analysis of satellite data for 1990-2009

    Directory of Open Access Journals (Sweden)

    Andreas Lehmann

    2012-06-01

    Full Text Available A statistical analysis of Baltic Sea upwelling has been carried out to cover, for the first time, the entire sea area for the period 1990-2009. Weekly composite SST maps based on NOAA/AVHRR satellite data were used to evaluate the location and frequency of upwelling. The results obtained were analysed and compared with earlier studies with excellent agreement. Our study enables the most intense upwelling areas in the entire Baltic Sea to be evaluated. According to the analysis of 443 SST maps, the most common upwelling regions are found off the Swedish south and east coasts (frequency 10-25%, the Swedish coast of the Bothnian Bay (16%, the southern tip of Gotland (up to 15%, and the Finnish coast of the Gulf of Finland (up to 15%. Pronounced upwelling also occurs off the Estonian coast and the Baltic east coast (up to 15%, the Polish coast and the west coast of Rügen (10-15%; otherwise the upwelling frequency was between 5 and 10%. Additionally, simulated SST distributions derived from a Baltic Sea numerical model were analysed for the same period. Furthermore, at specific positions close to the coastline, surface winds based on the SMHI meteorological data base were analysed for the same 20-year period. Wind components parallel to the coast were discriminated into favourable and unfavourable winds forcing upwelling. The obtained frequencies of upwelling-favourable winds fit very well the observed upwelling frequencies derived from satellite SST maps. A positive trend of upwelling frequencies along the Swedish east coast and the Finnish coast of the Gulf of Finland was calculated for the period 1990-2009.

  11. Relationship between nitrate reductase and nitrate uptake in phytoplankton in the Peru upwelling region

    International Nuclear Information System (INIS)

    Blasco, D.; MacIsaac, J.J.; Packard, T.T.; Dugdale, R.C.

    1984-01-01

    Nitrate reductase (NR) activity and 15 NO 3 - uptake in phytoplankton were compared under different environmental conditions on two cruises in the upwelling region off Peru. The NR activity and NO 3 - uptake rates responded differently to light and nutrients and the differences led to variations in the uptake: reductase ratio. Analysis of these variations suggests that the re-equilibration time of the two processes in response to environmental perturbation is an important source of variability. The nitrate uptake system responds faster than the nitrate reductase system. Considering these differences in response time the basic differences in the two processes, and the differences in their measurement, the authors conclude that the Nr activity measures the current nitrate-reducing potential, which reflects NO 3 - assimilation before the sampling time, while 15 NO 3 - uptake measures NO 3 - assimilation in the 6-h period following sampling

  12. 75 FR 3471 - International Conference on Harmonisation; Guidance on M3(R2) Nonclinical Safety Studies for the...

    Science.gov (United States)

    2010-01-21

    ...] International Conference on Harmonisation; Guidance on M3(R2) Nonclinical Safety Studies for the Conduct of... the availability of a guidance entitled ``M3(R2) Nonclinical Safety Studies for the Conduct of Human... auspices of the International Conference on Harmonisation of Technical Requirements for Registration of...

  13. Short-term meso-scale variability of mesozooplankton communities in a coastal upwelling system (NW Spain)

    Science.gov (United States)

    Roura, Álvaro; Álvarez-Salgado, Xosé A.; González, Ángel F.; Gregori, María; Rosón, Gabriel; Guerra, Ángel

    2013-02-01

    The short-term, meso-scale variability of the mesozooplankton community present in the coastal upwelling system of the Ría de Vigo (NW Spain) has been analysed. Three well-defined communities were identified: coastal, frontal and oceanic, according to their holoplankton-meroplankton ratio, richness, and total abundance. These communities changed from summer to autumn due to a shift from downwelling to upwelling-favourable conditions coupled with taxa dependent changes in life strategies. Relationships between the resemblance matrix of mesozooplankton and the resemblance matrices of meteorologic, hydrographic and community-derived biotic variables were determined with distance-based linear models (DistLM, 18 variables), showing an increasing amount of explained variability of 6%, 16.1% and 54.5%, respectively. A simplified model revealed that the variability found in the resemblance matrix of mesozooplankton was mainly described by the holoplankton-meroplankton ratio, the total abundance, the influence of lunar cycles, the upwelling index and the richness; altogether accounting for 64% of the total variability. The largest variability of the mesozooplankton resemblance matrix (39.6%) is accounted by the holoplankton-meroplankton ratio, a simple index that describes appropriately the coastal-ocean gradient. The communities described herein kept their integrity in the studied upwelling and downwelling episodes in spite of the highly advective environment off the Ría de Vigo, presumably due to behavioural changes in the vertical position of the zooplankton.

  14. Are large macroalgal blooms necessarily bad? Nutrient impacts on seagrass in upwelling-influenced estuaries.

    Science.gov (United States)

    Hessing-Lewis, Margot L; Hacker, Sally D; Menge, Bruce A; McConville, Sea-oh; Henderson, Jeremy

    2015-07-01

    Knowledge of nutrient pathways and their resulting ecological interactions can alleviate numerous environmental problems associated with nutrient increases in both natural and managed systems. Although not unique, coastal systems are particularly prone to complex ecological interactions resulting from nutrient inputs from both the land and sea. Nutrient inputs to coastal systems often spur ulvoid macroalgal blooms, with negative consequences for seagrasses, primarily through shading, as well as through changes in local biogeochemistry. We conducted complementary field and mesocosm experiments in an upwelling-influenced estuary, where marine-derived nutrients dominate, to understand the direct and indirect effects of nutrients on the macroalgal-eelgrass (Zostera marina L.) interaction. In the field experiment, we found weak evidence that nutrients and/or macroalgal treatments had a negative effect on eelgrass. However, in the mesocosm experiment, we found that a combination of nutrient and macroalgal treatments led to strongly negative eelgrass responses, primarily via indirect effects associated with macroalgal additions. Together, increased total light attenuation and decreased sediment oxygen levels were associated with larger effects on eelgrass than shading alone, which was evaluated using mimic algae treatments that did not alter sediment redox potential. Nutrient addition in the mesocosms directly affected seagrass density; biomass, and morphology, but not as strongly as macroalgae. We hypothesize that the contrary results from these parallel experiments are a consequence of differences in the hydrodynamics between field and mesocosm settings. We suggest that the high rates of water movement and tidal submersion of our intertidal field experiments alleviated the light reduction and negative biogeochemical changes in the sediment associated with macroalgal canopies, as well as the nutrient effects observed in the mesocosm experiments. Furthermore, adaptation

  15. Geochemistry and magnetic sediment distribution at the western boundary upwelling system of southwest Atlantic

    Science.gov (United States)

    Cruz, Anna P. S.; Barbosa, Catia F.; Ayres-Neto, Arthur; Munayco, Pablo; Scorzelli, Rosa B.; Amorim, Nívea Santos; Albuquerque, Ana L. S.; Seoane, José C. S.

    2018-02-01

    In order to investigate the chemical and magnetic characteristics of sediments of the western boundary upwelling system of Southwest Atlantic we analyzed magnetic susceptibility, grain size distribution, total organic carbon, heavy mineral abundance, Fe associated with Mössbauer spectra, and Fe and Mn of pore water to evaluate the deposition patterns of sediments. Four box-cores were collected along a cross-shelf transect. Brazil Current and coastal plume exert a primary control at the inner and outer shelf cores, which exhibited similar depositional patterns characterized by a high abundance of heavy minerals (mean 0.21% and 0.08%, respectively) and very fine sand, whereas middle shelf cores presented low abundances of heavy minerals (mean 0.03%) and medium silt. The inner shelf was dominated by sub-angular grains, while in middle and outer shelf cores well-rounded grains were found. The increasing Fe3+:Fe2+ ratio from the inner to the outer shelf reflects farther distance to the sediment source. The outer shelf presented well-rounded minerals, indicating abrasive processes as a result of transport by the Brazil Current from the source areas. In the middle shelf, cold-water intrusion of the South Atlantic Central Water contributes to the primary productivity, resulting in higher deposition of fine sediment and organic carbon accumulation. The high input of organic carbon and the decreased grain size are indicative of changes in the hydrodynamics and primary productivity fueled by the western boundary upwelling system, which promotes loss of magnetization due to the induction of diagenesis of iron oxide minerals.

  16. Kinematics and dynamics of the East Pacific Rise linked to a stable, deep-mantle upwelling

    Science.gov (United States)

    Rowley, David B.; Forte, Alessandro M.; Rowan, Christopher J.; Glišović, Petar; Moucha, Robert; Grand, Stephen P.; Simmons, Nathan A.

    2016-01-01

    Earth’s tectonic plates are generally considered to be driven largely by negative buoyancy associated with subduction of oceanic lithosphere. In this context, mid-ocean ridges (MORs) are passive plate boundaries whose divergence accommodates flow driven by subduction of oceanic slabs at trenches. We show that over the past 80 million years (My), the East Pacific Rise (EPR), Earth’s dominant MOR, has been characterized by limited ridge-perpendicular migration and persistent, asymmetric ridge accretion that are anomalous relative to other MORs. We reconstruct the subduction-related buoyancy fluxes of plates on either side of the EPR. The general expectation is that greater slab pull should correlate with faster plate motion and faster spreading at the EPR. Moreover, asymmetry in slab pull on either side of the EPR should correlate with either ridge migration or enhanced plate velocity in the direction of greater slab pull. Based on our analysis, none of the expected correlations are evident. This implies that other forces significantly contribute to EPR behavior. We explain these observations using mantle flow calculations based on globally integrated buoyancy distributions that require core-mantle boundary heat flux of up to 20 TW. The time-dependent mantle flow predictions yield a long-lived deep-seated upwelling that has its highest radial velocity under the EPR and is inferred to control its observed kinematics. The mantle-wide upwelling beneath the EPR drives horizontal components of asthenospheric flows beneath the plates that are similarly asymmetric but faster than the overlying surface plates, thereby contributing to plate motions through viscous tractions in the Pacific region. PMID:28028535

  17. Short-term changes in the northwest African Upwelling System induced by Saharan dust deposition events

    Energy Technology Data Exchange (ETDEWEB)

    Ramos, A G; Coca, J; Redondo, A [SeaSnet Canarias. Dpto. de Biologia (University of Las Palmas de Gran Canaria), Canary Islands (Spain); Cuevas, E; Alonso-Perez, S; Bustos, J J [Izana Atmospheric Research Center, Agencia Estatal de Meteorologia, Tenerife (Spain); Perez, C; Baldasano, J M [Earth Sciences Department. Barcelona Supercomputing Center, Barcelona (Spain); Nickovic, S [Atmospheric Research and Environment Branch, World Meteorological Organization, Geneva (Switzerland)], E-mail: aramos@pesca.gi.ulpgc.es

    2009-03-01

    During the last 7-year period (2000-2006) atmosphere circulation changes show strong influences on the dust storm deposition dynamics and, as a result, on the primary production dynamics of the northwest African Upwelling System. From 2000 to 2006, the annual mean sea level pressure became higher ranging from 1014 to 1015 mb. Mean annual zonal wind intensity became higher (from 1.1 to 1.8 m s{sup -1}), while the mean annual meridional was reduced from 6.2 to 5.3 m s{sup -1} at the north of the Canary Islands. Mean annual satellite-derived AVHRR/NOAA SST recorded in the northwest African Upwelling became warmer in both locations, from 18.3 deg. C to 18.8 deg. C in Cape Ghir and from 19.5 deg. C to 20.3 deg. C north Canary Islands waters. CHL records from the SeaWiFS/OV-2 showed a different pattern trend. Mean annual CHL levels increased at Cape Ghir from 0.65 mg m-3 to 0.9 mg m-3 and significantly reduced from 0.59 mg m{sup -3} to 0.31 mg m{sup -3} at the north of the Canary Islands. Changes observed in the role of CHL during the last 7-years period could be associated to intensive dust deposition and exceptional weather warming observed in this area since 2000. However, this study focused on a 7-year period and conclusions on possible links between dust deposition and marine biochemistry activity cannot be generalized.

  18. Deglacial upwelling, productivity and CO2 outgassing in the North Pacific Ocean

    Science.gov (United States)

    Gray, William R.; Rae, James W. B.; Wills, Robert C. J.; Shevenell, Amelia E.; Taylor, Ben; Burke, Andrea; Foster, Gavin L.; Lear, Caroline H.

    2018-05-01

    The interplay between ocean circulation and biological productivity affects atmospheric CO2 levels and marine oxygen concentrations. During the warming of the last deglaciation, the North Pacific experienced a peak in productivity and widespread hypoxia, with changes in circulation, iron supply and light limitation all proposed as potential drivers. Here we use the boron-isotope composition of planktic foraminifera from a sediment core in the western North Pacific to reconstruct pH and dissolved CO2 concentrations from 24,000 to 8,000 years ago. We find that the productivity peak during the Bølling-Allerød warm interval, 14,700 to 12,900 years ago, was associated with a decrease in near-surface pH and an increase in pCO2, and must therefore have been driven by increased supply of nutrient- and CO2-rich waters. In a climate model ensemble (PMIP3), the presence of large ice sheets over North America results in high rates of wind-driven upwelling within the subpolar North Pacific. We suggest that this process, combined with collapse of North Pacific Intermediate Water formation at the onset of the Bølling-Allerød, led to high rates of upwelling of water rich in nutrients and CO2, and supported the peak in productivity. The respiration of this organic matter, along with poor ventilation, probably caused the regional hypoxia. We suggest that CO2 outgassing from the North Pacific helped to maintain high atmospheric CO2 concentrations during the Bølling-Allerød and contributed to the deglacial CO2 rise.

  19. Desulfofrigus sp. prevails in sulfate-reducing dilution cultures from sediments of the Benguela upwelling area.

    Science.gov (United States)

    Kraft, Beate; Engelen, Bert; Goldhammer, Tobias; Lin, Yu-Shih; Cypionka, Heribert; Könneke, Martin

    2013-04-01

    Sediments of coastal upwelling areas are generally characterized by a high content of organic carbon that is mainly degraded via anaerobic microbial processes including sulfate reduction as a major terminal oxidation step. Despite the high importance of sulfate reduction in these sediments, the identity of sulfate-reducing bacteria (SRB) has remained almost unknown. Here, we applied a cultivation-based approach using selective enrichment conditions to study the diversity and distribution of active SRB in sediments along a transect perpendicular to the continental slope off the coast of Namibia (Meteor-cruise M76/1). To promote growth of the most abundant SRB, dilution series were prepared and amended with hydrogen, acetate, or a mixture of monomers representing typical substrates for SRB. Growth of SRB could be detected in the presence of all electron donors and from sediment down to 4 m depth. 16S rRNA gene-based DGGE analysis and sequencing revealed the predominance of SRB related to psychrophiles in particular to the genus Desulfofrigus, which made up 1 % of the total microbial community, accounting for an absolute abundance of up to 4.8 × 10(7)  cells mL(-1) . In general, the abundance of cultured SRB changed with depth and between the different sampling sites and correlated with the content of organic carbon as previously reported. Growth of chemolithotrophic SRB in relatively high dilution steps and the enrichment of methanogens as well as acetogens from deeper sediment point to a competition between hydrogen-utilizing microbial processes and their biogeochemical significance in deep sediment layers of the Benguela upwelling area. © 2012 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

  20. Short-term changes in the northwest African Upwelling System induced by Saharan dust deposition events

    International Nuclear Information System (INIS)

    Ramos, A G; Coca, J; Redondo, A; Cuevas, E; Alonso-Perez, S; Bustos, J J; Perez, C; Baldasano, J M; Nickovic, S

    2009-01-01

    During the last 7-year period (2000-2006) atmosphere circulation changes show strong influences on the dust storm deposition dynamics and, as a result, on the primary production dynamics of the northwest African Upwelling System. From 2000 to 2006, the annual mean sea level pressure became higher ranging from 1014 to 1015 mb. Mean annual zonal wind intensity became higher (from 1.1 to 1.8 m s -1 ), while the mean annual meridional was reduced from 6.2 to 5.3 m s -1 at the north of the Canary Islands. Mean annual satellite-derived AVHRR/NOAA SST recorded in the northwest African Upwelling became warmer in both locations, from 18.3 deg. C to 18.8 deg. C in Cape Ghir and from 19.5 deg. C to 20.3 deg. C north Canary Islands waters. CHL records from the SeaWiFS/OV-2 showed a different pattern trend. Mean annual CHL levels increased at Cape Ghir from 0.65 mg m-3 to 0.9 mg m-3 and significantly reduced from 0.59 mg m -3 to 0.31 mg m -3 at the north of the Canary Islands. Changes observed in the role of CHL during the last 7-years period could be associated to intensive dust deposition and exceptional weather warming observed in this area since 2000. However, this study focused on a 7-year period and conclusions on possible links between dust deposition and marine biochemistry activity cannot be generalized.

  1. Distribution of dissolved manganese in the Peruvian Upwelling and Oxygen Minimum Zone

    Science.gov (United States)

    Vedamati, Jagruti; Chan, Catherine; Moffett, James W.

    2015-05-01

    The geochemistry of manganese (Mn) in seawater is dominated by its redox chemistry, as Mn(II) is soluble and Mn(IV) forms insoluble oxides, and redox transformations are mediated by a variety of processes in the oceans. Dissolved Mn (DMn) accumulates under reducing conditions and is depleted under oxidizing conditions. Thus the Peruvian upwelling region, characterized by highly reducing conditions over a broad continental shelf and a major oxygen minimum zone extending far offshore, is potentially a large source of Mn to the eastern Tropical South Pacific. In this study, DMn was determined on cruises in October 2005 and February 2010 in the Peruvian Upwelling and Oxygen Minimum Zone, to evaluate the relationship between Mn, oxygen and nitrogen cycle processes. DMn concentrations were determined using simple dilution and matrix-matched external standardization inductively coupled mass spectrometry. Surprisingly, DMn was depleted under the most reducing conditions along the Peruvian shelf. Concentrations of dissolved Mn in surface waters increased offshore, indicating that advection of Mn offshore from the Peruvian shelf is a minor source. Subsurface Mn maxima were observed within the oxycline rather than within the oxygen minimum zone (OMZ), indicating they arise from remineralization of organic matter rather than reduction of Mn oxides. The distribution of DMn appears to be dominated by non-redox processes and inputs from the atmosphere and from other regions associated with specific water masses. Lower than expected DMn concentrations on the shelf probably reflect limited fluvial inputs from the continent and efficient offshore transport. This behavior is in stark contrast to Fe, reported in a companion study which is very high on the shelf and undergoes dynamic redox cycling.

  2. Design Concepts of Emergency Response Robot Platform K-R2D2

    Energy Technology Data Exchange (ETDEWEB)

    Noh, Sun Young; Jeong, Kyungmin [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

    2016-10-15

    From the analysis for various mobile robots competed in DARPA Robotics Challenge, there are some drawbacks in using two or four legs because bipedal locomotion is not yet suitable for maintaining stability and quadrupedal locomotion is difficult to go through narrow aisles. Motivated by the above observations, we propose a K-R2D2 robot platform with three legs arranged in the form of a triangle like as R2-D2 robot which is a fictional robot character in the Star Wars movies. This robot has 3 legs with tracks in each sole of the leg. It is statically stable since there are three contact points to ground. In addition, three legs are also possible to design a structure walking stairs that can expand and contract in the vertical direction. This paper has presented the conceptual design, it is developed on the purpose of quick response instead of emergent workers to the extreme conditions disasters. This robot is emergency response robot platform KR2D2 with three legs, which is statically stable to walk or wheel depending on the terrains and move quickly as possible as on uneven terrain or stairs.

  3. Shadow corrosion testing in the INCA facility in the Studsvik R2 reactor

    International Nuclear Information System (INIS)

    Nystrand, A.C.; Lassing, A.

    1999-01-01

    Shadow corrosion is a phenomenon which occurs when zirconium alloys are in contact with or in proximity to other metallic objects in a boiling water reactor environment (BWR, RBMK, SGHWR etc.). An enhanced corrosion occurs on the zirconium alloy with the appearance of a 'shadow' of the metallic object. The magnitude of the shadow corrosion can be significant, and is potentially limiting for the lifetime of certain zirconium alloy components in BWRs and other reactors with a similar water chemistry. In order to evaluate the suitability of the In-Core Autoclave (INCA) in the Studsvik R2 materials testing reactor as an experimental facility for studying shadow corrosion, a demonstration test has been performed. A number of test specimens consisting of Zircaloy-2 tubing in contact with Inconel were exposed in an oxidising water chemistry. Some of the specimens were placed within the reactor core and some above the core. The conclusion of this experiment after post irradiation examination is that it is possible to use the INCA facility in the Studsvik R2 reactor to develop a significant level of shadow corrosion after only 800 hours of irradiation. (author)

  4. Design Concepts of Emergency Response Robot Platform K-R2D2

    International Nuclear Information System (INIS)

    Noh, Sun Young; Jeong, Kyungmin

    2016-01-01

    From the analysis for various mobile robots competed in DARPA Robotics Challenge, there are some drawbacks in using two or four legs because bipedal locomotion is not yet suitable for maintaining stability and quadrupedal locomotion is difficult to go through narrow aisles. Motivated by the above observations, we propose a K-R2D2 robot platform with three legs arranged in the form of a triangle like as R2-D2 robot which is a fictional robot character in the Star Wars movies. This robot has 3 legs with tracks in each sole of the leg. It is statically stable since there are three contact points to ground. In addition, three legs are also possible to design a structure walking stairs that can expand and contract in the vertical direction. This paper has presented the conceptual design, it is developed on the purpose of quick response instead of emergent workers to the extreme conditions disasters. This robot is emergency response robot platform KR2D2 with three legs, which is statically stable to walk or wheel depending on the terrains and move quickly as possible as on uneven terrain or stairs

  5. Minimal $R+R^2$ Supergravity Models of Inflation Coupled to Matter

    CERN Document Server

    Ferrara, S

    2014-01-01

    The supersymmetric extension of "Starobinsky" $R+\\alpha R^2$ models of inflation is particularly simple in the "new minimal" formalism of supergravity, where the inflaton has no scalar superpartners. This paper is devoted to matter couplings in such supergravity models. We show how in the new minimal formalism matter coupling presents certain features absent in other formalisms. In particular, for the large class of matter couplings considered in this paper, matter must possess an R-symmetry, which is gauged by the vector field which becomes dynamical in the "new minimal" completion of the $R+\\alpha R^2$ theory. Thus, in the dual formulation of the theory, where the gauge vector is part of a massive vector multiplet, the inflaton is the superpartner of the massive vector of a nonlinearly realized R-symmetry. The F-term potential of this theory is of no-scale type, while the inflaton potential is given by the D-term of the gauged R-symmetry. The absolute minimum of the potential is always exactly supersymmetri...

  6. Vertical segregation among pathways mediating nitrogen loss (N2 and N2O production) across the oxygen gradient in a coastal upwelling ecosystem

    Science.gov (United States)

    Galán, Alexander; Thamdrup, Bo; Saldías, Gonzalo S.; Farías, Laura

    2017-10-01

    The upwelling system off central Chile (36.5° S) is seasonally subjected to oxygen (O2)-deficient waters, with a strong vertical gradient in O2 (from oxic to anoxic conditions) that spans a few metres (30-50 m interval) over the shelf. This condition inhibits and/or stimulates processes involved in nitrogen (N) removal (e.g. anammox, denitrification, and nitrification). During austral spring (September 2013) and summer (January 2014), the main pathways involved in N loss and its speciation, in the form of N2 and/or N2O, were studied using 15N-tracer incubations, inhibitor assays, and the natural abundance of nitrate isotopes along with hydrographic information. Incubations were developed using water retrieved from the oxycline (25 m depth) and bottom waters (85 m depth) over the continental shelf off Concepción, Chile. Results of 15N-labelled incubations revealed higher N removal activity during the austral summer, with denitrification as the dominant N2-producing pathway, which occurred together with anammox at all times. Interestingly, in both spring and summer maximum potential N removal rates were observed in the oxycline, where a greater availability of oxygen was observed (maximum O2 fluctuation between 270 and 40 µmol L-1) relative to the hypoxic bottom waters ( multiple N-cycling processes are modulating the isotopic nitrate composition over the shelf off central Chile during spring and summer. N removal processes in this coastal system appear to be related to the availability and distribution of oxygen and particles, which are a source of organic matter and the fuel for the production of other electron donors (i.e. ammonium) and acceptors (i.e. nitrate and nitrite) after its remineralization. These results highlight the links between several pathways involved in N loss. They also establish that different mechanisms supported by alternative N substrates are responsible for substantial accumulation of N2O, which are frequently observed as hotspots in the

  7. Distinct human and mouse membrane trafficking systems for sweet taste receptors T1r2 and T1r3.

    Science.gov (United States)

    Shimizu, Madoka; Goto, Masao; Kawai, Takayuki; Yamashita, Atsuko; Kusakabe, Yuko

    2014-01-01

    The sweet taste receptors T1r2 and T1r3 are included in the T1r taste receptor family that belongs to class C of the G protein-coupled receptors. Heterodimerization of T1r2 and T1r3 is required for the perception of sweet substances, but little is known about the mechanisms underlying this heterodimerization, including membrane trafficking. We developed tagged mouse T1r2 and T1r3, and human T1R2 and T1R3 and evaluated membrane trafficking in human embryonic kidney 293 (HEK293) cells. We found that human T1R3 surface expression was only observed when human T1R3 was coexpressed with human T1R2, whereas mouse T1r3 was expressed without mouse T1r2 expression. A domain-swapped chimera and truncated human T1R3 mutant showed that the Venus flytrap module and cysteine-rich domain (CRD) of human T1R3 contain a region related to the inhibition of human T1R3 membrane trafficking and coordinated regulation of human T1R3 membrane trafficking. We also found that the Venus flytrap module of both human T1R2 and T1R3 are needed for membrane trafficking, suggesting that the coexpression of human T1R2 and T1R3 is required for this event. These results suggest that the Venus flytrap module and CRD receive taste substances and play roles in membrane trafficking of human T1R2 and T1R3. These features are different from those of mouse receptors, indicating that human T1R2 and T1R3 are likely to have a novel membrane trafficking system.

  8. Seasonal fluctuations of ichthyoplankton assemblage in the northeastern South China Sea influenced by the Kuroshio intrusion

    Science.gov (United States)

    Huang, Delian; Zhang, Xia; Jiang, Zhijian; Zhang, Jingping; Arbi, Iman; Jiang, Xin; Huang, Xiaoping; Zhang, Wenjing

    2017-09-01

    The distribution and assemblage of ichthyoplankton related to local hydrographic features, especially intrusion of the Kuroshio Current (KC) and Guangdong Coastal Current (GCC) in the northeastern South China Sea (NESCS) were investigated in this study. A total of 193 species of ichthyoplankton belonging to 141 genera and 66 families were recognized in summer 2015 and late-winter 2016. The ichthyoplankton assemblage was identified with distinct seasonal differences, and the differences were responded well with the oceanography conditions. In summer, the assemblages were identified into offshore and inshore groups, as controlled by the South China Sea Warm Current (SCSWC) in off-shelf, upwelling, and the diluted water from the Pearl River in inshore. In winter, three groups were divided, representing the southwestern inshore, intrusion of the KC in the eastern offshore, and the GCC in the northern inshore area, respectively. Furthermore, Sigmops gracilis and Vinciguerria sp.3 were probably brought into the NESCS by intrusion of the KC from the eastern Luzon Strait. In addition, high ichthyoplankton abundance was found in high chlorophyll a located in upwelling areas in the northern coastal area in summer and in the southwestern Taiwan Bank in winter, respectively. The nutrition outcropped by the upwelling together, and those brought from the Pearl River probably supported high food availability of the ichthyoplankton in the northern coast of the NESCS.

  9. Variability of coastal water hydrodynamics in the southern Baltic - hindcast modelling of an upwelling event along the Polish coast

    Directory of Open Access Journals (Sweden)

    Andrzej Jankowski

    2002-12-01

    Full Text Available This paper presents the results of an attempt to reproduce, with theaid of a numerical circulation model, the hydrological conditions observedin the coastal area of the southern Baltic in September 1989.A large fall in surface layer seawater temperature was recordedin September 1989 at two coastal stations in the vicinity ofKolobrzeg and Wladyslawowo. This upwelling-like phenomenon was assumed tobe related to the specific anemobaric situation in September 1989,however typical of this phenomenon to occur along the Polish Baltic coast(Malicki & Mietus 1994. A three-dimensional (3-D sigma-coordinatebaroclinic model of the Baltic Sea, with a horizontal resolution of~5 km and 24 sigma-levels in the vertical, was applied to investigatewater circulation and thermohaline variability. Hindcastnumerical simulation showed that the model provided a good reproductionof the temporal history of the surface seawater temperature and theduration of the upwelling-like fall, but that the model results wereunderestimated. The maxima of this large fall in the surface layertemperature at both coastal stations are closely related to the phase ofchange of the upwelling-favourable wind direction to the opposite one.The results of simulation runs showed details of upwelling developmentdue to wind field fluctuations in time and differences in shaping thetemperature and current patterns in conjunction with the variations intopography and coastline features in some areas along the Polish coast.Two different hydrodynamic regimes of water movements along the coastresulting from topographical features (the Slupsk Bank can be distinguished.From the model simulation the specific conditions for the occurrence anddevelopment of upwelling at the eastern end of the Polish coast(in the vicinity of Wladyslawowo can be deduced.

  10. Spawning of the chilean hake (Merluccius gayi in the upwelling system off Talcahuano in relation to oceanographic features

    Directory of Open Access Journals (Sweden)

    Cristian A. Vargas

    2001-06-01

    Full Text Available Previous studies have shown that the upwelling area off Talcahuano, in central-south Chile, is an important spawning zone for the hake Merluccius gayi. We document the results of a study designed to assess the importance of oceanographic features on the horizontal and vertical distribution of hake eggs and larvae. Ichthyoplankton samples and oceanographic data (CTDO casts, and wind speed and direction were collected during a cruise carried out off Talcahuano (36º22´S-37º10´S in early spring (October 1996, which included a grid of 61 stations up to 60 nm offshore. The oceanographic information obtained revealed the presence of an upwelling plume at Lavapie Point (southern zone extending northward over the shelf, and the presence of a warmer water parcel close to shore in the northern area. Peak egg densities occurred in this northern area over the shelf, in a nucleus located at the shoreward moving deeper layer (40-100 m deep and associated with the upwelling front about 20-30 nm from shore. The highest larval abundance also occurred in the northern area over the shelf and in the deeper layer but closer to shore than the egg nucleus. Because the timing (early spring and location of spawning (at depth, over the shelf and in association with frontal structures are also shared by other hake species in upwelling areas, we propose that they may be part of a more commonly developed strategy to enhance offspring survival in coastal upwelling areas of eastern boundary currents.

  11. Facilitating Semantic Interoperability Among Ocean Data Systems: ODIP-R2R Student Outcomes

    Science.gov (United States)

    Stocks, K. I.; Chen, Y.; Shepherd, A.; Chandler, C. L.; Dockery, N.; Elya, J. L.; Smith, S. R.; Ferreira, R.; Fu, L.; Arko, R. A.

    2014-12-01

    With informatics providing an increasingly important set of tools for geoscientists, it is critical to train the next generation of scientists in information and data techniques. The NSF-supported Rolling Deck to Repository (R2R) Program works with the academic fleet community to routinely document, assess, and preserve the underway sensor data from U.S. research vessels. The Ocean Data Interoperability Platform (ODIP) is an EU-US-Australian collaboration fostering interoperability among regional e-infrastructures through workshops and joint prototype development. The need to align terminology between systems is a common challenge across all of the ODIP prototypes. Five R2R students were supported to address aspects of semantic interoperability within ODIP. Developing a vocabulary matching service that links terms from different vocabularies with similar concept. The service implements Google Refine reconciliation service interface such that users can leverage Google Refine application as a friendly user interface while linking different vocabulary terms. Developing Resource Description Framework (RDF) resources that map Shipboard Automated Meteorological Oceanographic System (SAMOS) vocabularies to internationally served vocabularies. Each SAMOS vocabulary term (data parameter and quality control flag) will be described as an RDF resource page. These RDF resources allow for enhanced discoverability and retrieval of SAMOS data by enabling data searches based on parameter. Improving data retrieval and interoperability by exposing data and mapped vocabularies using Semantic Web technologies. We have collaborated with ODIP participating organizations in order to build a generalized data model that will be used to populate a SPARQL endpoint in order to provide expressive querying over our data files. Mapping local and regional vocabularies used by R2R to those used by ODIP partners. This work is described more fully in a companion poster. Making published Linked Data

  12. Crystal-fields at rare-earth sites in R2Fe14B compounds

    International Nuclear Information System (INIS)

    Adam, S.; Adam, G.; Burzo, E.

    1985-12-01

    Crystal-field effects are expected to be important in R 2 Fe 14 B compounds. Within a model-independent approach, it is proved that four distinct rare-earth sites exist with respect to the crystalline electric fields, namely, R(4f; z=0), R(4f; z=0.5 c), R(4g; z=0), and R(4g; z=0.5 c), and relationships are established between the corresponding crystal-fields coefficients. Further, generalized Stevens parametrizations of the crystal field coefficients are derived at three levels of approximation for the interatomic forces inside the crystal. A crystal lattice dressing effect upon the radial electronic integrals is found to occur, the magnitude of which depends on the deviation of the interatomic forces from Coulombian. Finally, computation of crystal-field coefficients in Nd 2 Fe 14 B leads to results which raise questions about the validity of the simple Coulomb point-charge model. (author)

  13. Problems with change in R2 as applied to theory of reasoned action research.

    Science.gov (United States)

    Trafimow, David

    2004-12-01

    The paradigm of choice for theory of reasoned action research seems to depend largely on the notion of change in variance accounted for (DeltaR2) as new independent variables are added to a multiple regression equation. If adding a particular independent variable of interest increases the variance in the dependent variable that can be accounted for by the list of independent variables, then the research is deemed to be 'successful', and the researcher is considered to have made a convincing argument about the importance of the new variable. In contrast to this trend, I present arguments that suggest serious problems with the paradigm, and conclude that studies on attitude-behaviour relations would advance the field of psychology to a far greater extent if researchers abandoned it.

  14. Experience with the RE fuel transition at the Studsvik R2 reactor

    International Nuclear Information System (INIS)

    Pazsit, I.; Saltvedt, K.

    1991-01-01

    Irradiation of 7 LEU fuel elements is underway in the Studsvik R2 reactor. Four of these have 490 g U-235, and three 320 g U-235 loading, and the enrichment is 19.7% for all of them. The irradiation of LEU fuel started in 1987. The heavier elements have burnup figures 67% (CERCA), 50% (B and W), 47% (NUKEM) and 19% (B and W). One of the lighter elements has reached a burnup of 65%. To support the whole-core conversion process, reactor physical calculations were performed to see if a one-step conversion is possible with a suitable fuel management strategy such that all HEU fuel is burned up. The calculations show that it is possible to perform such a conversion with fuel elements containing 400 g U-235. (orig.)

  15. Power cycling and ramp test in R-2 and Mihama Unit 2 for MHI PWR fuels

    International Nuclear Information System (INIS)

    Baba, T.; Takahashi, T.; Kubo, H.; Fujiwara, Y.; Kondo, Y.

    1983-01-01

    Up to the present time, Mitsubishi has manufactured approximately 3000 fuel assemblies for Japanese PWRs, of which performance in reactors is satisfactory under base load operation. For the forthcoming load following age in Japan, expected in mid eighties, Mitsubishi is performing various R and D programs, so that load following operation can be smoothly introduced with current good performance maintained. R and D programs consist of two phases. One is the verification and demonstration of power ramping and cycling capability of the current design fuels, and the other is the development of remedy fuels with more operational margin. This paper describes the recent results obtained for the former phase, especially for the following two programs: (1) Power cycling and ramp test in R-2; (2) Power ramp demonstration (PRD) in Mihama Unit 2 (PRD-1). PIE works for power cycling and ramp test rods have been almost completed. The second PRD will be performed early in 1983

  16. Micro-heterogeneities in R2O-RO-B2O3

    International Nuclear Information System (INIS)

    Kawazoe, H.; Kokumai, H.; Hosono, H.; Kanazawa, T.

    1980-01-01

    ESR of incorporated Cu 2+ was used in the detection of micro-inhomogeneity in xR 2 O x yMgO x (100-x-y)B 2 O 3 glasses. The inhomogeneous region determined by ESR was found to be far wider than that obtained by opalescence. It was concluded that in the glasses of x + y approx. 2+ tends to accelerate the simultaneous formation of boroxol and diborate groups and in the glasses of x + y approx. < 15, boroxol group and pyroborate ion. The conclusion was confirmed by laser Raman scattering. Molecular volume was measured over the whole glass-forming region to explore the correlation between the micro-structure and a macroscopic property of the glasses. It showed no marked change at the specified composition where micro-structure changed. (orig.)

  17. pyres: a Python wrapper for electrical resistivity modeling with R2

    Science.gov (United States)

    Befus, Kevin M.

    2018-04-01

    A Python package, pyres, was written to handle common as well as specialized input and output tasks for the R2 electrical resistivity (ER) modeling program. Input steps including handling field data, creating quadrilateral or triangular meshes, and data filtering allow repeatable and flexible ER modeling within a programming environment. pyres includes non-trivial routines and functions for locating and constraining specific known or separately-parameterized regions in both quadrilateral and triangular meshes. Three basic examples of how to run forward and inverse models with pyres are provided. The importance of testing mesh convergence and model sensitivity are also addressed with higher-level examples that show how pyres can facilitate future research-grade ER analyses.

  18. The essential role of AMPA receptor GluR2 subunit RNA editing in the normal and diseased brain

    Directory of Open Access Journals (Sweden)

    Amanda Lorraine Wright

    2012-04-01

    Full Text Available AMPA receptors are comprised of different combinations of GluR1-GluR4 (also known as GluA1-GluA4 and GluR-A to GluR-D subunits. The GluR2 subunit is subject to Q/R site RNA editing by the ADAR2 enzyme, which converts a codon for glutamine (Q, present in the GluR2 gene, to a codon for arginine (R found in the mRNA. AMPA receptors are calcium (Ca2+-permeable if they contain the unedited GluR2(Q subunit or if they lack the GluR2 subunit. While most AMPA receptors in the brain contain the edited GluR2(R subunit and are therefore Ca2+-impermeable, recent evidence suggests that Ca2+-permeable GluR2-lacking AMPA receptors are important in synaptic plasticity and learning. However, the presence of Ca2+-permeable AMPA receptors containing unedited GluR2 leads to excitotoxic cell loss. Recent studies have indicated that RNA editing of GluR2 is deregulated in diseases, such as amyotrophic lateral sclerosis (ALS, as well in acute neurodegenerative conditions, such as ischemia. More recently, studies have investigated the regulation of RNA editing and possible causes for its deregulation during disease. In this review, we will explore the role of GluR2 RNA editing in the healthy and diseased brain and outline new insights into the mechanisms that control this process.

  19. EXPOSE-R2: The Astrobiological ESA Mission on Board of the International Space Station

    Directory of Open Access Journals (Sweden)

    Elke Rabbow

    2017-08-01

    Full Text Available On July 23, 2014, the Progress cargo spacecraft 56P was launched from Baikonur to the International Space Station (ISS, carrying EXPOSE-R2, the third ESA (European Space Agency EXPOSE facility, the second EXPOSE on the outside platform of the Russian Zvezda module, with four international astrobiological experiments into space. More than 600 biological samples of archaea, bacteria (as biofilms and in planktonic form, lichens, fungi, plant seeds, triops eggs, mosses and 150 samples of organic compounds were exposed to the harsh space environment and to parameters similar to those on the Mars surface. Radiation dosimeters distributed over the whole facility complemented the scientific payload. Three extravehicular activities later the chemical samples were returned to Earth on March 2, 2016, with Soyuz 44S, having spent 588 days in space. The biological samples arrived back later, on June 18, 2016, with 45S, after a total duration in space of 531 days. The exposure of the samples to Low Earth Orbit vacuum lasted for 531 days and was divided in two parts: protected against solar irradiation during the first 62 days, followed by exposure to solar radiation during the subsequent 469 days. In parallel to the space mission, a Mission Ground Reference (MGR experiment with a flight identical Hardware and a complete flight identical set of samples was performed at the premises of DLR (German Aerospace Center in Cologne by MUSC (Microgravity User Support Center, according to the mission data either downloaded from the ISS (temperature data, facility status, inner pressure status or provided by RedShift Design and Engineering BVBA, Belgium (calculated ultra violet radiation fluence data. In this paper, the EXPOSE-R2 facility, the experimental samples, mission parameters, environmental parameters, and the overall mission and MGR sequences are described, building the background for the research papers of the individual experiments, their analysis and results.

  20. Oxaliplatin Alters Expression of T1R2 Receptor and Sensitivity to Sweet Taste in Rats.

    Science.gov (United States)

    Ohishi, Akihiro; Nishida, Kentaro; Yamanaka, Yuri; Miyata, Ai; Ikukawa, Akiko; Yabu, Miharu; Miyamoto, Karin; Bansho, Saho; Nagasawa, Kazuki

    2016-01-01

    As one of the adverse effects of oxaliplatin, a key agent in colon cancer chemotherapy, a taste disorder is a severe issue in a clinical situation because it decreases the quality of life of patients. However, there is little information on the mechanism underlying the oxaliplatin-induced taste disorder. Here, we examined the molecular and behavioral characteristics of the oxaliplatin-induced taste disorder in rats. Oxaliplatin (4-16 mg/kg) was administered to Sprague-Dawley (SD) rats intraperitoneally for 2 d. Expression levels of mRNA and protein of taste receptors in circumvallate papillae (CP) were measured by real-time quantitative polymerase chain reaction (PCR) and immunohistochemistry, respectively. Taste sensitivity was assessed by their behavioral change using a brief-access test. Morphological change of the taste buds in CP was evaluated by hematoxyline-eosin (HE) staining, and the number of taste cells in taste buds was counted by immunohistochemical analysis. Among taste receptors, the expression levels of mRNA and protein of T1R2, a sweet taste receptor subunit, were increased transiently in CP of oxaliplatin-administered rats on day 7. In a brief-access test, the lick ratio was decreased in oxaliplatin-administered rats on day 7 and the alteration was recovered to the control level on day 14. There was no detectable alteration in the morphology of taste buds, number of taste cells or plasma zinc level in oxaliplatin-administered rats. These results suggest that decreased sensitivity to sweet taste in oxaliplatin-administered rats is due, at least in part, to increased expression of T1R2, while these alterations are reversible.

  1. Radial Ultrashort TE Imaging Removes the Need for Breath-Holding in Hepatic Iron Overload Quantification by R2* MRI.

    Science.gov (United States)

    Tipirneni-Sajja, Aaryani; Krafft, Axel J; McCarville, M Beth; Loeffler, Ralf B; Song, Ruitian; Hankins, Jane S; Hillenbrand, Claudia M

    2017-07-01

    The objective of this study is to evaluate radial free-breathing (FB) multiecho ultrashort TE (UTE) imaging as an alternative to Cartesian FB multiecho gradient-recalled echo (GRE) imaging for quantitative assessment of hepatic iron content (HIC) in sedated patients and subjects unable to perform breath-hold (BH) maneuvers. FB multiecho GRE imaging and FB multiecho UTE imaging were conducted for 46 test group patients with iron overload who could not complete BH maneuvers (38 patients were sedated, and eight were not sedated) and 16 control patients who could complete BH maneuvers. Control patients also underwent standard BH multiecho GRE imaging. Quantitative R2* maps were calculated, and mean liver R2* values and coefficients of variation (CVs) for different acquisitions and patient groups were compared using statistical analysis. FB multiecho GRE images displayed motion artifacts and significantly lower R2* values, compared with standard BH multiecho GRE images and FB multiecho UTE images in the control cohort and FB multiecho UTE images in the test cohort. In contrast, FB multiecho UTE images produced artifact-free R2* maps, and mean R2* values were not significantly different from those measured by BH multiecho GRE imaging. Motion artifacts on FB multiecho GRE images resulted in an R2* CV that was approximately twofold higher than the R2* CV from BH multiecho GRE imaging and FB multiecho UTE imaging. The R2* CV was relatively constant over the range of R2* values for FB multiecho UTE, but it increased with increases in R2* for FB multiecho GRE imaging, reflecting that motion artifacts had a stronger impact on R2* estimation with increasing iron burden. FB multiecho UTE imaging was less motion sensitive because of radial sampling, produced excellent image quality, and yielded accurate R2* estimates within the same acquisition time used for multiaveraged FB multiecho GRE imaging. Thus, FB multiecho UTE imaging is a viable alternative for accurate HIC assessment

  2. Timing of Seasonal Sales.

    OpenAIRE

    Courty, Pascal; Li, Hao

    1999-01-01

    We present a model of timing of seasonal sales where stores choose several designs at the beginning of the season without knowing wich one, if any, will be fashionable. Fashionable designs have a chance to fetch high prices in fashion markets while non-fashionable ones must be sold in a discount market. In the beginning of the season, stores charge high prices in the hope of capturing their fashion market. As the end of the season approaches with goods still on the shelves, stores adjust down...

  3. Late Cretaceous seasonal ocean variability from the Arctic.

    Science.gov (United States)

    Davies, Andrew; Kemp, Alan E S; Pike, Jennifer

    2009-07-09

    The modern Arctic Ocean is regarded as a barometer of global change and amplifier of global warming and therefore records of past Arctic change are critical for palaeoclimate reconstruction. Little is known of the state of the Arctic Ocean in the greenhouse period of the Late Cretaceous epoch (65-99 million years ago), yet records from such times may yield important clues to Arctic Ocean behaviour in near-future warmer climates. Here we present a seasonally resolved Cretaceous sedimentary record from the Alpha ridge of the Arctic Ocean. This palaeo-sediment trap provides new insight into the workings of the Cretaceous marine biological carbon pump. Seasonal primary production was dominated by diatom algae but was not related to upwelling as was previously hypothesized. Rather, production occurred within a stratified water column, involving specially adapted species in blooms resembling those of the modern North Pacific subtropical gyre, or those indicated for the Mediterranean sapropels. With increased CO(2) levels and warming currently driving increased stratification in the global ocean, this style of production that is adapted to stratification may become more widespread. Our evidence for seasonal diatom production and flux testify to an ice-free summer, but thin accumulations of terrigenous sediment within the diatom ooze are consistent with the presence of intermittent sea ice in the winter, supporting a wide body of evidence for low temperatures in the Late Cretaceous Arctic Ocean, rather than recent suggestions of a 15 degrees C mean annual temperature at this time.

  4. Seasonal nitrate algorithms for nitrate retrieval using OCEANSAT-2 and MODIS-AQUA satellite data.

    Science.gov (United States)

    Durairaj, Poornima; Sarangi, Ranjit Kumar; Ramalingam, Shanthi; Thirunavukarassu, Thangaradjou; Chauhan, Prakash

    2015-04-01

    In situ datasets of nitrate, sea surface temperature (SST), and chlorophyll a (chl a) collected during the monthly coastal samplings and organized cruises along the Tamilnadu and Andhra Pradesh coast between 2009 and 2013 were used to develop seasonal nitrate algorithms. The nitrate algorithms have been built up based on the three-dimensional regressions between SST, chl a, and nitrate in situ data using linear, Gaussian, Lorentzian, and paraboloid function fittings. Among these four functions, paraboloid was found to be better with the highest co-efficient of determination (postmonsoon: R2=0.711, n=357; summer: R2=0.635, n=302; premonsoon: R2=0.829, n=249; and monsoon: R2=0.692, n=272) for all seasons. Based on these fittings, seasonal nitrate images were generated using the concurrent satellite data of SST from Moderate Resolution Imaging Spectroradiometer (MODIS) and chlorophyll (chl) from Ocean Color Monitor (OCM-2) and MODIS. The best retrieval of modeled nitrate (R2=0.527, root mean square error (RMSE)=3.72, and mean normalized bias (MNB)=0.821) was observed for the postmonsoon season due to the better retrieval of both SST MODIS (28 February 2012, R2=0.651, RMSE=2.037, and MNB=0.068) and chl OCM-2 (R2=0.534, RMSE=0.317, and MNB=0.27). Present results confirm that the chl OCM-2 and SST MODIS retrieve nitrate well than the MODIS-derived chl and SST largely due to the better retrieval of chl by OCM-2 than MODIS.

  5. [Quantitative magnetic resonance imaging of brain iron deposition: comparison between quantitative susceptibility mapping and transverse relaxation rate (R2*) mapping].

    Science.gov (United States)

    Guan, Ji-Jing; Feng, Yan-Qiu

    2018-03-20

    To evaluate the accuracy and sensitivity of quantitative susceptibility mapping (QSM) and transverse relaxation rate (R2*) mapping in the measurement of brain iron deposition. Super paramagnetic iron oxide (SPIO) phantoms and mouse models of Parkinson's disease (PD) related to iron deposition in the substantia nigra (SN) underwent 7.0 T magnetic resonance (MR) scans (Bruker, 70/16) with a multi-echo 3D gradient echo sequence, and the acquired data were processed to obtain QSM and R2*. Linear regression analysis was performed for susceptibility and R2* in the SPIO phantoms containing 5 SPIO concentrations (30, 15, 7.5, 3.75 and 1.875 µg/mL) to evaluate the accuracy of QSM and R2* in quantitative iron analysis. The sensitivities of QSM and R2* mapping in quantitative detection of brain iron deposition were assessed using mouse models of PD induced by 1-methyl-4-phenyl-1,2,3,6-tetrahy-dropyridine (MPTP) in comparison with the control mice. In SPIO phantoms, QSM provided a higher accuracy than R2* mapping and their goodness-of-fit coefficients (R 2 ) were 0.98 and 0.89, respectively. In the mouse models of PD and control mice, the susceptibility of the SN was significantly higher in the PD models (5.19∓1.58 vs 2.98∓0.88, n=5; Pbrain iron deposition than R2*, and the susceptibility derived by QSM can be a potentially useful biomarker for studying PD.

  6. Evaluation of SAMe-TT2R2 Score on Predicting Success With Extended-Interval Warfarin Monitoring.

    Science.gov (United States)

    Hwang, Andrew Y; Carris, Nicholas W; Dietrich, Eric A; Gums, John G; Smith, Steven M

    2018-06-01

    In patients with stable international normalized ratios, 12-week extended-interval warfarin monitoring can be considered; however, predictors of success with this strategy are unknown. The previously validated SAMe-TT 2 R 2 score (considering sex, age, medical history, treatment, tobacco, and race) predicts anticoagulation control during standard follow-up (every 4 weeks), with lower scores associated with greater time in therapeutic range. To evaluate the ability of the SAMe-TT 2 R 2 score in predicting success with extended-interval warfarin follow-up in patients with previously stable warfarin doses. In this post hoc analysis of a single-arm feasibility study, baseline SAMe-TT 2 R 2 scores were calculated for patients with ≥1 extended-interval follow-up visit. The primary analysis assessed achieved weeks of extended-interval follow-up according to baseline SAMe-TT 2 R 2 scores. A total of 47 patients receiving chronic anticoagulation completed a median of 36 weeks of extended-interval follow-up. The median baseline SAMe-TT 2 R 2 score was 1 (range 0-5). Lower SAMe-TT 2 R 2 scores appeared to be associated with greater duration of extended-interval follow-up achieved, though the differences between scores were not statistically significant. No individual variable of the SAMe-TT 2 R 2 score was associated with achieved weeks of extended-interval follow-up. Analysis of additional patient factors found that longer duration (≥24 weeks) of prior stable treatment was significantly associated with greater weeks of extended-interval follow-up completed ( P = 0.04). Conclusion and Relevance: This pilot study provides limited evidence that the SAMe-TT 2 R 2 score predicts success with extended-interval warfarin follow-up but requires confirmation in a larger study. Further research is also necessary to establish additional predictors of successful extended-interval warfarin follow-up.

  7. Predictability of Seasonal Rainfall over the Greater Horn of Africa

    Science.gov (United States)

    Ngaina, J. N.

    2016-12-01

    The El Nino-Southern Oscillation (ENSO) is a primary mode of climate variability in the Greater of Africa (GHA). The expected impacts of climate variability and change on water, agriculture, and food resources in GHA underscore the importance of reliable and accurate seasonal climate predictions. The study evaluated different model selection criteria which included the Coefficient of determination (R2), Akaike's Information Criterion (AIC), Bayesian Information Criterion (BIC), and the Fisher information approximation (FIA). A forecast scheme based on the optimal model was developed to predict the October-November-December (OND) and March-April-May (MAM) rainfall. The predictability of GHA rainfall based on ENSO was quantified based on composite analysis, correlations and contingency tables. A test for field-significance considering the properties of finiteness and interdependence of the spatial grid was applied to avoid correlations by chance. The study identified FIA as the optimal model selection criterion. However, complex model selection criteria (FIA followed by BIC) performed better compared to simple approach (R2 and AIC). Notably, operational seasonal rainfall predictions over the GHA makes of simple model selection procedures e.g. R2. Rainfall is modestly predictable based on ENSO during OND and MAM seasons. El Nino typically leads to wetter conditions during OND and drier conditions during MAM. The correlations of ENSO indices with rainfall are statistically significant for OND and MAM seasons. Analysis based on contingency tables shows higher predictability of OND rainfall with the use of ENSO indices derived from the Pacific and Indian Oceans sea surfaces showing significant improvement during OND season. The predictability based on ENSO for OND rainfall is robust on a decadal scale compared to MAM. An ENSO-based scheme based on an optimal model selection criterion can thus provide skillful rainfall predictions over GHA. This study concludes that the

  8. Ocean variability over the Agulhas Bank and its dynamical connection with the southern Benguela upwelling system

    CSIR Research Space (South Africa)

    Blanke, B

    2009-12-01

    Full Text Available .8 4.9 South 1.97 �36.86 0.23 �228.5 212.4 35.08 0.20 14.7 4.6 West 0.79 �36.47 0.61 �129.3 149.9 35.10 0.17 15.3 3.7 North 0.35 �36.20 0.73 �78.6 82.6 35.13 0.11 15.9 2.7 Benguela 0.38 �35.84 0.75 �75.9 71.2 35.13 0.11 14.8 2.4 aSD, standard... the shelf edge but excursions into the open ocean do occur, either to the southwest of the Agulhas Bank or west of the Benguela upwelling system. Cross-shore movements take place as eddying pathways, because of capture by coherent structures...

  9. Persistence of trophic hotspots and relation to human impacts within an upwelling marine ecosystem.

    Science.gov (United States)

    Santora, Jarrod A; Sydeman, William J; Schroeder, Isaac D; Field, John C; Miller, Rebecca R; Wells, Brian K

    2017-03-01

    Human impacts (e.g., fishing, pollution, and shipping) on pelagic ecosystems are increasing, causing concerns about stresses on marine food webs. Maintaining predator-prey relationships through protection of pelagic hotspots is crucial for conservation and management of living marine resources. Biotic components of pelagic, plankton-based, ecosystems exhibit high variability in abundance in time and space (i.e., extreme patchiness), requiring investigation of persistence of abundance across trophic levels to resolve trophic hotspots. Using a 26-yr record of indicators for primary production, secondary (zooplankton and larval fish), and tertiary (seabirds) consumers, we show distributions of trophic hotspots in the southern California Current Ecosystem result from interactions between a strong upwelling center and a productive retention zone with enhanced nutrients, which concentrate prey and predators across multiple trophic levels. Trophic hotspots also overlap with human impacts, including fisheries extraction of coastal pelagic and groundfish species, as well as intense commercial shipping traffic. Spatial overlap of trophic hotspots with fisheries and shipping increases vulnerability of the ecosystem to localized depletion of forage fish, ship strikes on marine mammals, and pollution. This study represents a critical step toward resolving pelagic areas of high conservation interest for planktonic ecosystems and may serve as a model for other ocean regions where ecosystem-based management and marine spatial planning of pelagic ecosystems is warranted. © 2016 by the Ecological Society of America.

  10. Mantle upwelling beneath Madagascar: evidence from receiver function analysis and shear wave splitting

    Science.gov (United States)

    Paul, Jonathan D.; Eakin, Caroline M.

    2017-07-01

    Crustal receiver functions have been calculated from 128 events for two three-component broadband seismomenters located on the south coast (FOMA) and in the central High Plateaux (ABPO) of Madagascar. For each station, crustal thickness and V p / V s ratio were estimated from H- κ plots. Self-consistent receiver functions from a smaller back-azimuthal range were then selected, stacked and inverted to determine shear wave velocity structure as a function of depth. These results were corroborated by guided forward modeling and by Monte Carlo error analysis. The crust is found to be thinner (39 ± 0.7 km) beneath the highland center of Madagascar compared to the coast (44 ± 1.6 km), which is the opposite of what would be expected for crustal isostasy, suggesting that present-day long wavelength topography is maintained, at least in part, dynamically. This inference of dynamic support is corroborated by shear wave splitting analyses at the same stations, which produce an overwhelming majority of null results (>96 %), as expected for vertical mantle flow or asthenospheric upwelling beneath the island. These findings suggest a sub-plate origin for dynamic support.

  11. Relationship between nitrate reductase and nitrate uptake in phytoplankton in the Peru upwelling region

    International Nuclear Information System (INIS)

    Blasco, D.; MacIsaac, J.J.; Packard, T.T.; Dugdale, R.C.

    1984-01-01

    Nitrate reductase (NR) activity and 15 NO 3 - uptake in phytoplankton were compared under different environmental conditions on two cruises in the upwelling region off Peru. The NR activity and NO 3 - uptake rates responded differently to light and nutrients and the differences led to variations in the uptake:reductase ratio. Analysis of these variations suggests that the re-equilibration time of the two processes in response to environmental perturbation is an important source of variability. The nitrate uptake system responds faster than the nitrate reductase system. Considering these differences in response time, the basic differences in the two processes, and the differences in their measurement, the authors conclude that the NR activity measures the current nitrate-reducing potential, which relfects NO 3 - assimilation before the sampling time, while 15 NO 3 - uptake measures NO 3 - assimilation in the 6-h period following sampling. Thus, considering the sampling time as a point of reference, the former is a measure of the past and the latter is a measure of the future

  12. Defining seascapes for marine unconsolidated shelf sediments in an eastern boundary upwelling region: The southern Benguela as a case study

    Science.gov (United States)

    Karenyi, Natasha; Sink, Kerry; Nel, Ronel

    2016-02-01

    Marine unconsolidated sediment habitats, the largest benthic ecosystem, are considered physically controlled ecosystems driven by a number of local physical processes. Depth and sediment type are recognised key drivers of these ecosystems. Seascape (i.e., marine landscape) habitat classifications are based solely on consistent geophysical features and provide an opportunity to define unconsolidated sediment habitats based on processes which may vary in distribution through space and time. This paper aimed to classify unconsolidated sediment seascapes and explore their diversity in an eastern boundary upwelling region at the macro-scale, using the South African west coast as a case study. Physical variables such as sediment grain size, depth and upwelling-related variables (i.e., maximum chlorophyll concentration, austral summer bottom oxygen concentration and sediment organic carbon content) were included in the analyses. These variables were directly measured through sampling, or collated from existing databases and the literature. These data were analysed using multivariate Cluster, Principal Components Ordination and SIMPER analyses (in PRIMER 6 + with PERMANOVA add-in package). There were four main findings; (i) eight seascapes were identified for the South African west coast based on depth, slope, sediment grain size and upwelling-related variables, (ii) three depth zones were distinguished (inner, middle and outer shelf), (iii) seascape diversity in the inner and middle shelves was greater than the outer shelf, and (iv) upwelling-related variables were responsible for the habitat diversity in both inner and middle shelves. This research demonstrates that the inclusion of productivity and its related variables, such as hypoxia and sedimentary organic carbon, in seascape classifications will enhance the ability to distinguish seascapes on continental shelves, where productivity is most variable.

  13. Alkaline phosphatase activity at the southwest coast of India: A comparison of locations differently affected by upwelling

    Science.gov (United States)

    Mamatha, S. S.; Malik, Ashish; Varik, Sandesh; Parvathi, V.; Jineesh, V. K.; Gauns, Mangesh U.; LokaBharathi, P. A.

    2015-01-01

    The realization of the potential importance of phosphorus (P) as a limiting nutrient in marine ecosystem is increasing globally. Hence, the contribution of biotic variables in mobilizing this nutrient would be relevant especially in productive coastal waters. As alkaline phosphatase activity (APA) indicates the status of P for primary production in aquatic environments, we asked the following question: is the level of APA indicative of P sufficiency or deficiency in coastal waters, especially, where upwelling is a regular phenomenon? Therefore, we have examined the total APA, chlorophyll a along with phosphatase producing bacteria (PPB) and related environmental parameters from nearshore to offshore in coastal waters off Trivandrum and Kochi regions differently affected by upwelling during the onset of monsoon. Off Trivandrum, APA in the offshore waters of 5-m layer at 2.23 μM P h- 1 was > 4 times higher than nearshore. Thus, low APA could be indicative of P sufficiency in coastal waters and higher activity suggestive of deficiency in offshore waters off Trivandrum. In contrast, there was less difference in APA between near and offshore surface waters off Kochi. Our results show that the regions differently affected by upwelling respond differently according to ambient P concentration, distance from shore or depth of water. These observations could apparently be applicable to other coastal systems as well, where gradients in upwelling and phosphate runoff have been noticed. Further studies on other transects would throw more light on the extent and direction of the relationship between APA and ambient P concentration. Such studies would help in understanding the level of control of this nutrient on the productivity of coastal waters.

  14. Distribution of Euphausia mucronata at the upwelling area of Peninsula Mejillones, northern Chile: The influence of the oxygen minimum layer

    OpenAIRE

    Escribano, R.; Marin, V.; Irribarren, C.

    2000-01-01

    Analysis of zooplankton samples from 53 stations obtained around Peninsula Mejillones (Northern Chile), from two strata: 0-50 m and 150-200 m, during active upwelling in December 1996, allowed the study of horizontal and vertical distribution of Euphausia mucronata, endemic Krill of the Humboldt Current. Information from CTDO and a fluorometer was used to analyze the influence of oceanographic variables on distribution of E. mucronata. E. mucronata was found distributed all around the Peninsu...

  15. An R2R3-MYB transcription factor regulates carotenoid pigmentation in Mimulus lewisii flowers.

    Science.gov (United States)

    Sagawa, Janelle M; Stanley, Lauren E; LaFountain, Amy M; Frank, Harry A; Liu, Chang; Yuan, Yao-Wu

    2016-02-01

    Carotenoids are yellow, orange, and red pigments that contribute to the beautiful colors and nutritive value of many flowers and fruits. The structural genes in the highly conserved carotenoid biosynthetic pathway have been well characterized in multiple plant systems, but little is known about the transcription factors that control the expression of these structural genes. By analyzing a chemically induced mutant of Mimulus lewisii through bulk segregant analysis and transgenic experiments, we have identified an R2R3-MYB, Reduced Carotenoid Pigmentation 1 (RCP1), as the first transcription factor that positively regulates carotenoid biosynthesis during flower development. Loss-of-function mutations in RCP1 lead to down-regulation of all carotenoid biosynthetic genes and reduced carotenoid content in M. lewisii flowers, a phenotype recapitulated by RNA interference in the wild-type background. Overexpression of this gene in the rcp1 mutant background restores carotenoid production and, unexpectedly, results in simultaneous decrease of anthocyanin production in some transgenic lines by down-regulating the expression of an activator of anthocyanin biosynthesis. Identification of transcriptional regulators of carotenoid biosynthesis provides the 'toolbox' genes for understanding the molecular basis of flower color diversification in nature and for potential enhancement of carotenoid production in crop plants via genetic engineering. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  16. Irradiation of Superheater Test Fuel Elements in the Steam Loop of the R2 Reactor

    Energy Technology Data Exchange (ETDEWEB)

    Ravndal, F

    1967-12-15

    The design, fabrication, irradiation results, and post-irradiation examination for three superheater test fuel elements are described. During the spring of 1966 these clusters, each consisting of six fuel rods, were successfully exposed in the superheater loop No. 5 in the R2 reactor for a maximum of 24 days at a maximum outer cladding surface temperature of {approx} 650 deg C. During irradiation the linear heat rating of the rods was in the range 400-535 W/cm. The diameter of the UO{sub 2} pellets was 11.5 and 13.0 mm; the wall thickness of the 20/25 Nb and 20/35 cladding was in every case 0.4 mm. The diametrical gap between fuel and cladding was one of the main parameters and was chosen to be 0.05, 0.07 and 0.10 mm. These experiments, to be followed by one high cladding temperature irradiation ({approx} 750 deg C) and one long time irradiation ({approx} 6000 MWd/tU), were carried out to demonstrate the operational capability of short superheater test fuel rods at steady and transient operational environments for the Marviken superheater fuel elements and also to provide confirmation of design criteria for the same fuel elements.

  17. Evaluation of results from an in-pile creep test in the Studsvik R2 reactor

    Energy Technology Data Exchange (ETDEWEB)

    Pettersson, Kjell [Entropy Materials, Stockholm (Sweden)

    2002-01-01

    An in-pile creep test with bowing of cladding tubes has been performed in a hot water loop in the Studsvik R2 reactor . One test was performed in the core and one outside the core. The out-of-pile sample showed some minor primary creep strain while the in-pile specimen deformed at a steady rate of 5x10{sup -7}/h . However, when the results were compared to a broader data base of Zircaloy in-pile creep it became clear that the creep deformation observed is a primary creep which occurs before the irradiation creep in Zircaloy reaches a constant steady state creep rate. This primary stage is interpreted as a consequence of the development of an irradiation induced microstructure in Zircaloy which does not reach a steady state until a dose of about 10{sup 21} n/cm{sup 2} . At this stage the steady state irradiation creep starts. From this interpretation it is concluded that it is quite feasible to use the test method on pre-irradiated material in which it can be expected that the steady state will be reached already after short irradiation times.

  18. Excitation of chiral molecules and their hydrated by clusters by R2PI studies

    International Nuclear Information System (INIS)

    Satta, M.; Piccirillo, S.; Scuderia, D.; Paladini, A.; Della Vedova, L.; Filippi, A.; Speranza, M.; Giardini, A.

    2002-01-01

    Molecular clusters play a key role in the molecular scale explanation of macroscopic phenomena, being in between the isolated gas phase and the condensed phase. Thus, allowing to obtain information on intermolecular forces simply by studying the physicochemical properties of isolated clusters and to extend them macroscopic systems. A comprehensive study of the short-range forces operating in the molecular complexes between several chiral aromatic alcohols (M) and water (solv), through the application of mass resolved REMPI technique is reported. The experimental setup was composed by a supersonic molecular beam, two Nd-YAG pumped dye lasers and a time of flight mass spectrometer. The photoionization efficiency curves were obtained as follows: a) the first exciting laser (hv 1 ) was tuned on the S 1 0 transition of the species of interest; b) the laser intensity is lowered to about 1 % of the initial fluence to minimize the hv 1 absorption; c)a second laser (hv 2 ) is scanned through the cluster ionization and fragmentation threshold regions. The binding energy of the M-solv adduct was computed from the differences between its dissociative ionization threshold and the ionization threshold of bare M. The mass-resolved one colour R2PI excitation spectra of l-tetralol (THN R ), THN R -H 2 O, l i ndanol (I R ) and I R -H 2 O are given. (nevyjel)

  19. Anomalous magnetoresistance in antiferromagnetic polycrystalline materials R2Ni3Si5 (R=rare earth)

    International Nuclear Information System (INIS)

    Mazumdar, C.; Nigam, A.K.; Nagarajan, R.; Gupta, L.C.; Chandra, G.; Padalia, B.D.; Godart, C.; Vijayaraghaven, R.

    1997-01-01

    Magnetoresistance (MR) studies on polycrystalline R 2 Ni 3 Si 5 , (R=Y, rare earth) which order antiferromagnetically at low temperatures, are reported here. MR of the Nd, Sm, and Tb members of the series exhibit positive giant magnetoresistance, largest among polycrystalline materials (85%, 75%, and 58% for Tb 2 Ni 3 Si 5 , Sm 2 Ni 3 Si 5 , and Nd 2 Ni 3 Si 5 , respectively, at 4.4 K in a field of 45 kG). These materials have, to the best of our knowledge, the largest positive GMR reported ever for any bulk polycrystalline compounds. The magnitude of MR does not correlate with the rare earth magnetic moments. We believe that the structure of these materials, which can be considered as a naturally occurring multilayer of wavy planes of rare earth atoms separated by Ni endash Si network, plays a role. The isothermal MR of other members of this series (R=Pr,Dy,Ho) exhibits a maximum and a minimum, below their respective T N close-quote s. We interpret these in terms of a metamagnetic transition and short-range ferromagnetic correlations. The short-range ferromagnetic correlations seem to be dominant in the temperature region just above T N . copyright 1997 American Institute of Physics

  20. Assessing and Adapting Scientific Results for Space Weather Research to Operations (R2O)

    Science.gov (United States)

    Thompson, B. J.; Friedl, L.; Halford, A. J.; Mays, M. L.; Pulkkinen, A. A.; Singer, H. J.; Stehr, J. W.

    2017-12-01

    Why doesn't a solid scientific paper necessarily result in a tangible improvement in space weather capability? A well-known challenge in space weather forecasting is investing effort to turn the results of basic scientific research into operational knowledge. This process is commonly known as "Research to Operations," abbreviated R2O. There are several aspects of this process: 1) How relevant is the scientific result to a particular space weather process? 2) If fully utilized, how much will that result improve the reliability of the forecast for the associated process? 3) How much effort will this transition require? Is it already in a relatively usable form, or will it require a great deal of adaptation? 4) How much burden will be placed on forecasters? Is it "plug-and-play" or will it require effort to operate? 5) How can robust space weather forecasting identify challenges for new research? This presentation will cover several approaches that have potential utility in assessing scientific results for use in space weather research. The demonstration of utility is the first step, relating to the establishment of metrics to ensure that there will be a clear benefit to the end user. The presentation will then move to means of determining cost vs. benefit, (where cost involves the full effort required to transition the science to forecasting, and benefit concerns the improvement of forecast reliability), and conclude with a discussion of the role of end users and forecasters in driving further innovation via "O2R."

  1. Tumor VEGF-R2 imaging with Tc-99m DTPA-dextran-DC101

    International Nuclear Information System (INIS)

    Kim, E. M.; Jeong, H. J.; Kim, S. L.; Jeong, S. J.; Lee, C. M.; Kim, D. W.; Lim, S. T.; Sohn, M. H.

    2007-01-01

    Vascular endothelial growth factor (VEGF) and its receptor (fetal liver kinase 1/kinase insert domain-containing receptor) play an important role in vascular permeability and tumor angiogenesis. Here, we investigated the Tc-99m DC101-dextran for VEGF-R2 imaging in tumor xenografted mice. DTPA conjugated amino-dextran was synthesized and then this was reacted with sulfo-LC-SPDP. Synthesis was identified by 1H-NMR. DTPA-dextran-SPDP was reacted with DC101. Binding affinity was checked by ELISA assay. Female athymic nude mice bearing B16F10 tumors were each injected via the tail vein with about 18.5 MBq of the Tc-99m DTPA-dextran-DC101, Tc-99m DTPA-DC101 and I-131 DC101. Biodistribution was performed at 1, 6, and 24h. DTPA-dextran-DC101 bind to FLK-1 in a dose-dependent manner. And this was blocked by significantly by free DC101. Labeling efficiency was approximately above 99% at 24 hr. Tc-99m DTPA-DC101 and I-131 DC101 showed rapid liver uptake, whereas Tc-99m DTPA-dextran-DC101 weak liver uptake and kidney elimination. In biodistribution results, Tc-99m DTPA-dextran-DC101 showed rapid renal clearance, and increased tumor uptake according to the time. Conjugation of antibody with dextran polymer is responsible for the decreased liver uptake and increased tumor uptake

  2. Mantle Upwellings Below the Ibero-Maghrebian Region with a Common Deep Source from P Travel-time Tomography

    Science.gov (United States)

    Civiero, C.; Custodio, S.; Silveira, G. M.; Rawlinson, N.; Arroucau, P.

    2017-12-01

    The processes responsible for the geodynamical evolution of the Ibero-Maghrebian domain are still enigmatic. Several geophysical studies have improved our understanding of the region, but no single model has been accepted yet. This study takes advantage of the dense station networks deployed from France in the north to Canary Islands and Morocco in the south to provide a new high-resolution P-wave velocity model of the structure of the upper-mantle and top of the lower mantle. These images show subvertical small-scale upwellings below Atlas Range, Canary Islands and Central Iberia that seem to cross the transition zone. The results, together with geochemical evidence and a comparison with previous global tomographic models, reveal the ponding or flow of deep-plume material beneath the transition zone, which seems to feed upper-mantle "secondary" pulses. In the upper mantle the plumes, in conjunction with the subduction-related upwellings, allow the hot mantle to rise in the surrounding zones. During its rising, the mantle interacts with horizontal SW slab-driven flow which skirts the Alboran slab and connects with the mantle upwelling below Massif Central through the Valencia Trough rift.

  3. Distribution of Euphausia mucronata at the upwelling area of Peninsula Mejillones, northern Chile: The influence of the oxygen minimum layer

    Directory of Open Access Journals (Sweden)

    R. Escribano

    2000-03-01

    Full Text Available Analysis of zooplankton samples from 53 stations obtained around Peninsula Mejillones (Northern Chile, from two strata: 0-50 m and 150-200 m, during active upwelling in December 1996, allowed the study of horizontal and vertical distribution of Euphausia mucronata, endemic Krill of the Humboldt Current. Information from CTDO and a fluorometer was used to analyze the influence of oceanographic variables on distribution of E. mucronata. E. mucronata was found distributed all around the Peninsula, although with greater aggregations in the southern area, especially in the deeper layer. Stepwise multiple regression showed that none of the variables (temperature, salinity and chlorophyll was significantly correlated to numerical abundance of the species. However there was a significant effect of depth of the oxygen minimum layer (OML, defined as 0.5 ml O2 l-1, on integrated abundance of the species, such that individuals are more likely to be found in areas where the OML is deeper. A vertical distribution parameter suggested a diurnal migrational pattern. This parameter was also correlated with distance to shoreline. The OML rises abrutply in nearshore areas because of active upwelling, but there are still nearshore zones where the OML remains deep. Therefore E. mucronata appears to aggregate around the upwelling lenses and filaments, where phytoplankton is more concentrated, but at the same time avoiding places where the OML is too shallow.

  4. Does Fat Suppression via Chemically Selective Saturation (CHESS) Affect R2*-MRI for Transfusional Iron Overload Assessment? A Clinical Evaluation at 1.5 and 3 Tesla

    Science.gov (United States)

    Krafft, Axel J.; Loeffler, Ralf B.; Song, Ruitian; Bian, Xiao; McCarville, M. Beth; Hankins, Jane S.; Hillenbrand, Claudia M.

    2015-01-01

    Purpose Fat suppression (FS) via chemically selective saturation (CHESS) eliminates fat-water oscillations in multi-echo gradient echo (mGRE) R2*-MRI. However, for increasing R2* values as seen with increasing liver iron content (LIC), the water signal spectrally overlaps with the CHESS band, which may alter R2*. Here, we investigate the effect of CHESS on R2* and describe a heuristic correction for the observed CHESS-induced R2* changes. Methods Eighty patients (49/31 female/male, mean age: 18.3±11.7 years) with iron overload were scanned with a non-FS and a CHESS-FS mGRE sequence at 1.5T and 3T. Mean liver R2* values were evaluated using 3 published fitting approaches. Measured and model-corrected R2* values were compared and statistically analyzed. Results At 1.5T, CHESS led to a systematic R2* reduction (PCHESS-induced R2* bias after correction (linear regression slopes: 1.032/0.927/0.981). No CHESS-induced R2* reductions were found at 3T. Conclusion The CHESS-induced R2* bias at 1.5T needs to be considered when applying R2*-LIC biopsy calibrations for clinical LIC assessment which were established without FS at 1.5T. The proposed model corrects the R2* bias and could therefore improve clinical iron overload assessment based on linear R2*-LIC calibrations. PMID:26308155

  5. Non-LTR R2 element evolutionary patterns: phylogenetic incongruences, rapid radiation and the maintenance of multiple lineages.

    Directory of Open Access Journals (Sweden)

    Andrea Luchetti

    Full Text Available Retrotransposons of the R2 superclade specifically insert within the 28S ribosomal gene. They have been isolated from a variety of metazoan genomes and were found vertically inherited even if their phylogeny does not always agree with that of the host species. This was explained with the diversification/extinction of paralogous lineages, being proved the absence of horizontal transfer. We here analyze the widest available collection of R2 sequences, either newly isolated from recently sequenced genomes or drawn from public databases, in a phylogenetic framework. Results are congruent with previous analyses, but new important issues emerge. First, the N-terminal end of the R2-B clade protein, so far unknown, presents a new zinc fingers configuration. Second, the phylogenetic pattern is consistent with an ancient, rapid radiation of R2 lineages: being the estimated time of R2 origin (850-600 Million years ago placed just before the metazoan Cambrian explosion, the wide element diversity and the incongruence with the host phylogeny could be attributable to the sudden expansion of available niches represented by host's 28S ribosomal genes. Finally, we detect instances of coexisting multiple R2 lineages showing a non-random phylogenetic pattern, strongly similar to that of the "library" model known for tandem repeats: a collection of R2s were present in the ancestral genome and then differentially activated/repressed in the derived species. Models for activation/repression as well as mechanisms for sequence maintenance are also discussed within this framework.

  6. Role of physical forcings and nutrient availability on the control of satellite-based chlorophyll a concentration in the coastal upwelling area of the Sicilian Channel

    Directory of Open Access Journals (Sweden)

    Bernardo Patti

    2010-08-01

    Full Text Available The northern sector of the Sicilian Channel is an area of favourable upwelling winds, which ought to support primary production. However, the values for primary production are low when compared with other Mediterranean areas and very low compared with the most biologically productive regions of the world’s oceans: California, the Canary Islands, Humboldt and Benguela. The aim of this study was to identify the main factors that limit phytoplankton biomass in the Sicilian Channel and modulate its monthly changes. We compared satellite-based estimates of chlorophyll a concentration in the Strait of Sicily with those observed in the four Eastern Boundary Upwelling Systems mentioned above and in other Mediterranean wind-induced coastal upwelling systems (the Alboran Sea, the Gulf of Lions and the Aegean Sea. Our results show that this low level of chlorophyll is mainly due to the low nutrient level in surface and sub-surface waters, independently of wind-induced upwelling intensity. Further, monthly changes in chlorophyll are mainly driven by the mixing of water column and wind-induced and/or circulation-related upwelling processes. Finally, primary production limitation due to the enhanced stratification processes resulting from the general warming trend of Mediterranean waters is not active over most of the coastal upwelling area off the southern Sicilian coast.

  7. Intensification of Chile-Peru upwelling under climate change: diagnosing the impact of natural and anthropogenic forcing from the IPSL-CM5 model.

    Science.gov (United States)

    Jebri, B.; Khodri, M.; Gastineau, G.; Echevin, V.; Thiria, S.

    2017-12-01

    Upwelling is critical to the biological production, acidification, and deoxygenation of the ocean's major eastern boundary current ecosystems. A conceptual hypothesis suggests that the winds that favour coastal upwelling intensify with anthropogenic global warming due to increased land-sea temperature contrast. We examine this hypothesis for the dynamics of the Peru-Chile upwelling using a set of four large ensembles of coupled, ocean-atmosphere model simulations with the IPSL model covering the 1940-2014 period. In one large ensemble we prescribe the standard CMIP5 greenhouse gas (GHG) concentrations, anthropogenic aerosol, ozone and volcanic forcings, following the historical experiments through 2005 and RCP8.5 from 2006-2014, while the other ensembles consider separately the GHG, ozone and volcanic forcings. We find evidence for intensification of upwelling-favourable winds with however little evidence of atmospheric pressure gradients in response to increasing land-sea temperature differences. Our analyses reveal poleward migration and intensification of the South Pacific Anticyclone near poleward boundaries of climatological Peruvian and Chilean upwelling zones. This contribution further investigates the physical mechanisms for the Peru-Chile upwelling intensification and the relative role of natural and anthropogenic forcings.

  8. Seasonality in the Austrian Economy: Common Seasonals and Forecasting

    OpenAIRE

    Kunst, Robert M.

    1992-01-01

    Abstract: Seasonal cointegration generalizes the idea of cointegration to processes with unit roots at frequencies different from 0. Here, also the dual notion of common trends, "common seasonals", is adopted for the seasonal case. Using a five-variable macroeconomic core system of the Austrian economy, it is demonstrated how common seasonals and seasonal cointegrating vectors look in practice. Statistical tests provide clear evidence on seasonal cointegration in the system. However, it is sh...

  9. Kinetics of N-Utilization By Natural Phytoplankton Assemblages During Upwelling Events At The NW Iberian Shelf

    Science.gov (United States)

    Brion, N.; Elskens, M.; Dehairs, F.; Baeyens, W.

    2003-04-01

    The concentration-dependent uptakes of nitrate, ammonium and the effect of ammo-nium on the f-ratio were surveyed in surface waters of the NW Iberian shelf during June 1997, July 1998 and September 1999. Because relationships between rates and substrate concentrations were quite variable, ranging from linear to convex shaped curves, they were fitted to rational functions. Stepwize regression analysis yielded subsequent model equations with reasonable statistical properties which allowed describing all but all a few cases. Differentiating these equations with respect to the concentration gave the slope of the tangent to the curve, i.e., the variation in rate expected for a given perturbation of the ambient substrate concentration. The initial slope value was then used as an index to gauge the "affinity" of the plankton community for the nitrogen substrate utilization. In June 1997, the situation at the Iberian shelf showed no upwelling except near Cape Finistère. Overall, the phytoplankton community displayed a high "affinity" for both nitrate and ammonium and low f-ratio values, which is indicative of a re-generated production regime. High ammonium regeneration rates supported furthermore these observations. It was also demonstrated that the new production rates is only marginally sensitive to changes of the ambient nitrate and/or ammonium concentrations. This indicates that the production regime is rather stable throughout. Only at Cape Finistère, nitrate concentrations were high reflecting the onset of an upwelling event. In this zone, the phytoplankton community, taking advantage of its high affinity for nitrate enhanced both total N-uptake rate and f-ratio. In July 1998, the situation evolved towards an extension to the south of the upwelling event starting at Cape Finistère. In this southern zone of the upwelling the phytoplankton community displayed generally a lower affinity for nitrate (but not for ammonium) than in 1997. In spite of this lower affinity

  10. Production, extraction and characterization of exopolysaccharides produced by the native Leuconostoc pseudomesenteroides R2 strain

    Directory of Open Access Journals (Sweden)

    Elinalva M. Paulo

    2012-06-01

    Full Text Available The genus Leuconostoc belongs to a group of lactic acid bacteria usually isolated from fermented vegetables, which includes species involved in the production of exopolysaccharides (EPS. These biopolymers possess considerable commercial potential. Because of the wide variety of industrial applications of EPS, this study aimed to produce and characterize the native exopolysaccharide strain Leuconostoc pseudomesenteroides R2, which was isolated from cabbage collected in a semi-arid region of Bahia. We employed the following conditions for the production of EPS: 10.7% sucrose, pH 8.2, without agitation and incubation at 28ºC for 30 hours. The fermentation broth was treated with ethanol and generated two types of polysaccharide substances (EPS I and EPS II. The identification of EPS I and EPS II was conducted using FT-IR, ¹H, 13C and DEPT-135 NMR spectra. The two substances were identified as linear dextran α polysaccharides (1 → 6 which indicated different characteristics with respect to thermal analysis and density of free packaging, viscosity and time of solubilization. Both dextrans are of low density, possess high thermal stability and exhibited the behavior characteristic of pseudoplastic polymers.O gênero Leuconostoc pertence a um grupo de bactérias lácticas normalmente isoladas de vegetais fermentados, que inclui espécies envolvidas na produção de exopolissacarídeos (EPS. Esses biopolímeros possuem potencial comercial considerável. Devido à grande variedade de aplicações industriais, de EPS, o presente estudo teve como objetivo produzir e caracterizar o nativo exopolissacarídeo cepa Leuconostoc pseudomesenteroides R2, que foi isolado de repolho coletado em uma região semi-árida da Bahia. Utilizamos as seguintes condições para a produção de EPS: 10,7% de sacarose, pH 8,2, sem agitação e incubação a 28º C por 30 horas. O caldo fermentado foi tratado com etanol, gerando dois tipos de substâncias de polissacar

  11. Rolling Deck to Repository (R2R): Products and Services for the U.S. Research Fleet Community

    Science.gov (United States)

    Arko, R. A.; Carbotte, S. M.; Chandler, C. L.; Smith, S. R.; Stocks, K. I.

    2016-02-01

    The Rolling Deck to Repository (R2R) program is working to ensure open access to environmental sensor data routinely acquired by the U.S. academic research fleet. Currently 25 vessels deliver 7 TB/year of data to R2R from a suite of geophysical, oceanographic, meteorological, and navigational sensors on over 400 cruises worldwide. R2R ensures these data are preserved in trusted repositories, discoverable via standard protocols, and adequately documented for reuse. R2R has recently expanded to include the vessels Sikuliaq, operated by the University of Alaska; Falkor, operated by the Schmidt Ocean Institute; and Ronald H. Brown and Okeanos Explorer, operated by NOAA. R2R maintains a master catalog of U.S. research cruises, currently holding over 4,670 expeditions including vessel and cruise identifiers, start/end dates and ports, project titles and funding awards, science parties, dataset inventories with instrument types and file formats, data quality assessments, and links to related content at other repositories. Standard post-field cruise products are published including shiptrack navigation, near-real-time MET/TSG data, underway geophysical profiles, and CTD profiles. Software tools available to users include the R2R Event Logger and the R2R Nav Manager. A Digital Object Identifier (DOI) is published for each cruise, original field sensor dataset, standard post-field product, and document (e.g. cruise report) submitted by the science party. Scientists are linked to personal identifiers such as ORCIDs where available. Using standard identifiers such as DOIs and ORCIDs facilitates linking with journal publications and generation of citation metrics. R2R collaborates in the Ocean Data Interoperability Platform (ODIP) to strengthen links among regional and national data systems, populates U.S. cruises in the POGO global catalog, and is working toward membership in the DataONE alliance. It is a lead partner in the EarthCube GeoLink project, developing Semantic Web

  12. Use of the p-SINE1-r2 in inferring evolutionary relationships of Thai rice varieties with AA genome

    Directory of Open Access Journals (Sweden)

    Preecha Prathepha

    2006-01-01

    Full Text Available In a previous study we described the prevalence and distribution in Thailand of the retroposon p- SINE1-r2, in the intron 10 of the waxy gene in cultivated and wild rice with the AA genome. In this study, additional varieties of rice were collected and sequencing was used to further characterize p-SINE1-r2. It was found that the length of the p-SINE1-r2 nucleotide sequences was about 125 bp, flanked by identical direct repeats of a 14 bp sequence. These sequences were compared and found to be similar to the sequences of p- SINE1-r2 found in Nipponbare, a rice strain discussed in a separate study. However, when compared the 48 DNA sequences identified in this study, much dissimilarity was found within the nucleotide sequences of p- SINE1-r2, in the form of base substitution mutations. Phylogenetic relationships inferred from the nucleotide sequences of these elements in cultivated rice (O. sativa and wild rice (O. nivara. It was found that rice accessions collected from the same geographical distribution have been placed in the same clade. The phylogenetic tree supports the origin and distribution of these rice strains.

  13. Genome-Wide Identification of R2R3-MYB Genes and Expression Analyses During Abiotic Stress in Gossypium raimondii

    Science.gov (United States)

    He, Qiuling; Jones, Don C.; Li, Wei; Xie, Fuliang; Ma, Jun; Sun, Runrun; Wang, Qinglian; Zhu, Shuijin; Zhang, Baohong

    2016-01-01

    The R2R3-MYB is one of the largest families of transcription factors, which have been implicated in multiple biological processes. There is great diversity in the number of R2R3-MYB genes in different plants. However, there is no report on genome-wide characterization of this gene family in cotton. In the present study, a total of 205 putative R2R3-MYB genes were identified in cotton D genome (Gossypium raimondii), that are much larger than that found in other cash crops with fully sequenced genomes. These GrMYBs were classified into 13 groups with the R2R3-MYB genes from Arabidopsis and rice. The amino acid motifs and phylogenetic tree were predicted and analyzed. The sequences of GrMYBs were distributed across 13 chromosomes at various densities. The results showed that the expansion of the G. Raimondii R2R3-MYB family was mainly attributable to whole genome duplication and segmental duplication. Moreover, the expression pattern of 52 selected GrMYBs and 46 GaMYBs were tested in roots and leaves under different abiotic stress conditions. The results revealed that the MYB genes in cotton were differentially expressed under salt and drought stress treatment. Our results will be useful for determining the precise role of the MYB genes during stress responses with crop improvement. PMID:27009386

  14. Gene Expression Profiling Identifies Important Genes Affected by R2 Compound Disrupting FAK and P53 Complex

    International Nuclear Information System (INIS)

    Golubovskaya, Vita M.; Ho, Baotran; Conroy, Jeffrey; Liu, Song; Wang, Dan; Cance, William G.

    2014-01-01

    Focal Adhesion Kinase (FAK) is a non-receptor kinase that plays an important role in many cellular processes: adhesion, proliferation, invasion, angiogenesis, metastasis and survival. Recently, we have shown that Roslin 2 or R2 (1-benzyl-15,3,5,7-tetraazatricyclo[3.3.1.1~3,7~]decane) compound disrupts FAK and p53 proteins, activates p53 transcriptional activity, and blocks tumor growth. In this report we performed a microarray gene expression analysis of R2-treated HCT116 p53 +/+ and p53 −/− cells and detected 1484 genes that were significantly up- or down-regulated (p < 0.05) in HCT116 p53 +/+ cells but not in p53 −/− cells. Among up-regulated genes in HCT p53 +/+ cells we detected critical p53 targets: Mdm-2, Noxa-1, and RIP1. Among down-regulated genes, Met, PLK2, KIF14, BIRC2 and other genes were identified. In addition, a combination of R2 compound with M13 compound that disrupts FAK and Mmd-2 complex or R2 and Nutlin-1 that disrupts Mdm-2 and p53 decreased clonogenicity of HCT116 p53 +/+ colon cancer cells more significantly than each agent alone in a p53-dependent manner. Thus, the report detects gene expression profile in response to R2 treatment and demonstrates that the combination of drugs targeting FAK, Mdm-2, and p53 can be a novel therapy approach

  15. Multiscale upwelling forcing cycles and biological response off north-central Chile Ciclos multiescala en el forzamiento de la surgencia y respuesta biológica en el centro-norte de Chile

    Directory of Open Access Journals (Sweden)

    JOSÉ RUTLLANT

    2002-03-01

    Full Text Available The physical forcing of the upwelling along the subtropical west coasts of the continents encompasses a broad range of time scales which shape both phytoplankton biomass (Chl-a and primary productivity (carbon fixation changes over any given time interval. The narrow continental shelf and the steep alongshore orography off north-central Chile provide for a unique combination of year-round, upwelling-favorable winds with quasi-weekly upwelling pulses associated with atmospheric coastal-trapped disturbances (coastal lows. This variability is modulated by intraseasonal oscillations in the depth of the thermo/nutricline, produced by coastal-trapped waves in the ocean, upon which annual (seasons and interannual (ENSO cycles are superimposed. During coastal field experiments off Cruz Grande bay (29º S, carried on in November 1987 and 1988 (opposite extremes of the ENSO cycle, mean changes of the phytoplankton-integrated Chl-a (B and carbon fixation rate (PP from the active to the relaxed phases of the local upwelling forcing cycle (phyto-pattern were characterized. Those data were contrasted against similar ones reported off Punta Lengua de Vaca (Coquimbo, 30º S and off Mejillones peninsula (Antofagasta, 23º S, encompassing different seasons and phases of intraseasonal and interannual (ENSO cycles from 1992 to 1997. A "warm" phyto-pattern was schematically characterized by a significant increase in B and a quasi-steady evolution of PP from the active to the relaxed phases of one complete upwelling event. Conversely, relative small changes in B and a significant increase in PP characterized a "cold" phyto-pattern. It is proposed here that the ENSO "cold/warm" signal may be offset by more than one opposite "thermal" condition (seasonal and/or intraseasonal in defining a "warm" or "cold" phyto-pattern associated with a particular cycle of the local upwelling forcingEl forzamiento físico de la surgencia a lo largo de las costas occidentales de los

  16. Seasonality of Suicidal Behavior

    Science.gov (United States)

    Woo, Jong-Min; Okusaga, Olaoluwa; Postolache, Teodor T.

    2012-01-01

    A seasonal suicide peak in spring is highly replicated, but its specific cause is unknown. We reviewed the literature on suicide risk factors which can be associated with seasonal variation of suicide rates, assessing published articles from 1979 to 2011. Such risk factors include environmental determinants, including physical, chemical, and biological factors. We also summarized the influence of potential demographic and clinical characteristics such as age, gender, month of birth, socioeconomic status, methods of prior suicide attempt, and comorbid psychiatric and medical diseases. Comprehensive evaluation of risk factors which could be linked to the seasonal variation in suicide is important, not only to identify the major driving force for the seasonality of suicide, but also could lead to better suicide prevention in general. PMID:22470308

  17. Seasonal Affective Disorder

    Science.gov (United States)

    ... than any non-seasonal depressions. Symptoms of Major Depression Feeling depressed most of the day, nearly every ... Bethesda, MD 20892-9663 Follow Us Facebook Twitter YouTube Google Plus NIMH Newsletter NIMH RSS Feed NIMH ...

  18. CCAA seasonal forecasting

    International Development Research Centre (IDRC) Digital Library (Canada)

    Integrating meteorological and indigenous knowledge-based seasonal climate forecasts in ..... Explanation is based on spiritual and social values. Taught by .... that provided medicine and food became the subject of strict rules and practices ...

  19. Impact de l'upwelling côtier sur l'abondance et les tailles des marlins bleus, (Makaira nigricans, Lacepède, 1802 capturés au large de la Côte d'Ivoire par les artisans pêcheurs marins

    Directory of Open Access Journals (Sweden)

    Koffi, KD.

    2009-01-01

    Full Text Available Costal Upwelling Impact on the Abundance and Sizes of Blue Marlins (Makaira nigricans, Lacepède, 1802 Captures by Artisans Fishers in the Offing of Ivory Coast. This study concern blue marlins (Makaira nigricans, Lacepede 1802 landed by sea artisan fishers in Abidjan port (Ivory Coast from February 2006 to January 2007. During the Great Warm Season (GWS March-April-May, the surface temperature average is 28.61 °C. With a Fishing Effort (FE of 3,874 canoes; 285 blue marlins have been landed. Their weigh average is 77.70 kg with a Capture by Unit Effort (CPUE of 5.62 kg. During this warm season, 187 blue marlins (65.61 % have their sizes between 105 and 200 cm against only 98 (34.39% which exceeds 200 cm. During the Great Cold Season (GCS july-august-september, the average temperature is 25.58 °C. With 7,338 canoes (FE went in sea, 244 fishes have a average weigh of 140.36 kg and a CPUE of 4.23 kg. During this upwelling period, only 43 M. nigricans (17.62% have their size between 105 and 200 cm, against 201 (82.38% which measure more than 200 cm. Therefore these two seasons, sizes and weights variance analyze with the Test-t show respectively a p-value highly significant (p- value = 2,255 x 10 -15 < 5% et (p- value = 7,508 x10 -12 < 5%.

  20. Ps mantle transition zone imaging beneath the Colorado Rocky Mountains: Evidence for an upwelling hydrous mantle

    Science.gov (United States)

    Zhang, Zhu; Dueker, Kenneth G.; Huang, Hsin-Hua

    2018-06-01

    We analyze teleseismic P-to-S conversions for high-resolution imaging of the mantle transition zone beneath the Colorado Rocky Mountains using data from a dense PASSCAL seismic broadband deployment. A total of 6,021 P-to-S converted receiver functions are constructed using a multi-channel minimum-phase deconvolution method and migrated using the common converted point technique with the 3-D teleseismic P- and S-wave tomography models of Schmandt and Humphreys (2010). The image finds that the average depths of the 410-km discontinuity (the 410) and 660-km discontinuity (the 660) at 408 ± 1.9 km and 649 ± 1.6 km respectively. The peak-to-peak topography of both discontinuities is 33 km and 27 km respectively. Additionally, prominent negative polarity phases are imaged both above and below the 410. To quantify the mean properties of the low-velocity layers about 410 km, we utilize double gradient layer models parameterization to fit the mean receiver function waveform. This waveform fitting is accomplished as a grid-search using anelastic synthetic seismograms. The best-fitting model reveals that the olivine-wadsleyite phase transformation width is 21 km, which is significantly larger than anhydrous mineral physics prediction (4-10 km) (Smyth and Frost, 2002). The findings of a wide olivine-wadsleyite phase transformation and the negative polarity phases above and below the 410, suggest that the mantle, at least in the 350-450 km depth range, is significantly hydrated. Furthermore, a conspicuous negative polarity phase below the 660 is imaged in high velocity region, we speculate the low velocity layer is due to dehydration flux melting in an area of convective downwelling. Our interpretation of these results, in tandem with the tomographic image of a Farallon slab segment at 800 km beneath the region (Schmandt and Humphreys, 2010), is that hydrous and upwelling mantle contributes to the high-standing Colorado Rocky Mountains.