WorldWideScience

Sample records for upper ocean biological

  1. On the role of atmospheric forcing on upper ocean physics in the Southern Ocean and biological impacts

    Science.gov (United States)

    Carranza, Magdalena M.

    The Southern Ocean (SO) plays a key role in regulating climate by absorbing nearly half of anthropogenic carbon dioxide (CO2). Both physical and biogeochemical processes contribute to the net CO2 sink. As a result of global warming and ozone depletion, westerly winds have increased, with consequences for upper ocean physics but little is known on how primary producers are expected to respond to changes in atmospheric forcing. This thesis addresses the impact of atmospheric forcing on upper ocean dynamics and phytoplankton bloom development in the SO on synoptic storm scales, combining a broad range of observations derived from satellites, reanalysis, profiling floats and Southern elephant seals. On atmospheric synoptic timescales (2-10 days), relevant for phytoplankton growth and accumulation, wind speed has a larger impact on satellite Chl-a variability than surface heat fluxes or wind stress curl. In summer, strong winds are linked to deep mixed layers, cold sea surface temperatures and enhanced satellite chlorophyll-a (Chl-a), which suggest wind-driven entrainment plays a role in sustaining phytoplankton blooms at the surface. Subsurface bio-optical data from floats and seals reveal deep Chl-a fluorescence maxima (DFM) are ubiquitous in summer and tend to sit at the base of the mixed layer, but can occur in all seasons. The fact that wind speed and Chl-a correlations are maximal at zero lag time (from daily data) and incubation experiments indicate phytoplankton growth occurs 3-4 days after iron addition, suggests high winds in summer entrain Chl-a from a subsurface maximum. Vertical profiles also reveal Chl-a fluorescence unevenness within hydrographically defined mixed layers, suggesting the biological timescales of adaptation through the light gradient (i.e. growth and/or photoacclimation) are often faster than mixing timescales, and periods of quiescence between storms are long enough for biological gradients to form within the homogeneous layer in density

  2. The biological pump: Profiles of plankton production and consumption in the upper ocean

    Science.gov (United States)

    Longhurst, Alan R.; Glen Harrison, W.

    The ‘biological pump’ mediates flux of carbon to the interior of the ocean by interctions between the components of the vertically-structured pelagic ecosystem of the photic zone. Chlorophyll profiles are not a simple indicator of autotrophic biomass or production, because of non-linearities in the physiology of cells and preferential vertical distribution of taxa. Profiles of numbers or biomass of heterotrophs do not correspond with profiles of consumption, because of depth-selection (taxa, seasons) for reasons unconnected with feeding. Depths of highest plant biomass, chlorophyll and growth rate coincide when these depths are shallow, but become progressively separated in profiles where they are deeper - so that highest growth rate lies progressively shallower than the chloropyll maximum. It is still uncertain how plant biomass is distributed in deep profiles. Depths of greatest heterotroph biomass (mesozooplankton) are usually close to depths of fastest plant growth rate, and thus lie shallower than the chlorophyll maximum in profiles where this itself is deep. This correlation is functional, and relates to the role of heterotrophs in excreting metabolic wastes (especially ammonia), which may fuel a significant component of integrated algal production, especially in the oligotrophic ocean. Some, but not all faecal material from mesozooplankton of the photic zone appears in vertical flux below the pycnocine, depending on the size of the source organisms, and the degree of vertical mixing above the pycnocline. Diel, but probably not seasonal, vertical migration is significant in the vertical flux of dissolved nitrogen. Regional generalisations of the vertical relations of the main components of the ‘biological pump’ now appear within reach, and an approach is suggested.

  3. Seasonal evolution of the upper-ocean adjacent to the South Orkney Islands, Southern Ocean: Results from a “lazy biological mooring”

    Science.gov (United States)

    Meredith, Michael P.; Nicholls, Keith W.; Renfrew, Ian A.; Boehme, Lars; Biuw, Martin; Fedak, Mike

    2011-07-01

    A serendipitous >8-month time series of hydrographic properties was obtained from the vicinity of the South Orkney Islands, Southern Ocean, by tagging a southern elephant seal ( Mirounga leonina) on Signy Island with a Conductivity-Temperature-Depth/Satellite-Relay Data Logger (CTD-SRDL) in March 2007. Such a time series (including data from the austral autumn and winter) would have been extremely difficult to obtain via other means, and it illustrates with unprecedented temporal resolution the seasonal progression of upper-ocean water mass properties and stratification at this location. Sea ice production values of around 0.15-0.4 m month -1 for April to July were inferred from the progression of salinity, with significant levels still in September (around 0.2 m month -1). However, these values presume that advective processes have negligible effect on the salinity changes observed locally; this presumption is seen to be inappropriate in this case, and it is argued that the ice production rates inferred are better considered as "smeared averages" for the region of the northwestern Weddell Sea upstream from the South Orkneys. The impact of such advective effects is illustrated by contrasting the observed hydrographic series with the output of a one-dimensional model of the upper-ocean forced with local fluxes. It is found that the difference in magnitude between local (modelled) and regional (inferred) ice production is significant, with estimates differing by around a factor of two. A halo of markedly low sea ice concentration around the South Orkneys during the austral winter offers at least a partial explanation for this, since it enabled stronger atmosphere/ocean fluxes to persist and hence stronger ice production to prevail locally compared with the upstream region. The year of data collection was an El Niño year, and it is well-established that this phenomenon can impact strongly on the surface ocean and ice field in this sector of the Southern Ocean, thus

  4. Upper ocean physical processes in the Tropical Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Rao, L.V.G.; Ram, P.S.

    This monograph is the outcome of an attempt by the authors to present a synthesis of the studies on physical processes in the Tropical Indian Ocean (TIO) in relation to air-sea interaction, monsoon/climate variability and biological productivity...

  5. Acoustic explorations of the upper ocean boundary layer

    Science.gov (United States)

    Vagle, Svein

    2005-04-01

    The upper ocean boundary layer is an important but difficult to probe part of the ocean. A better understanding of small scale processes at the air-sea interface, including the vertical transfer of gases, heat, mass and momentum, are crucial to improving our understanding of the coupling between atmosphere and ocean. Also, this part of the ocean contains a significant part of the total biomass at all trophic levels and is therefore of great interest to researchers in a range of different fields. Innovative measurement plays a critical role in developing our understanding of the processes involved in the boundary layer, and the availability of low-cost, compact, digital signal processors and sonar technology in self-contained and cabled configurations has led to a number of exciting developments. This talk summarizes some recent explorations of this dynamic boundary layer using both active and passive acoustics. The resonant behavior of upper ocean bubbles combined with single and multi-frequency broad band active and passive devices are now giving us invaluable information on air-sea gas transfer, estimation of biological production, marine mammal behavior, wind speed and precipitation, surface and internal waves, turbulence, and acoustic communication in the surf zone.

  6. Upper ocean circulation modulation by phytoplankton concentration in the Equatorial Pacific and the Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Nakamoto, S.; PrasannaKumar, S.; Oberhuber, J.M.; Sammarco, P.; Muneyama, K.; Sato, T.; AjoyKumar, A.; Frouin, R.

    gradient in the upper ocean. This strengthens the geostrophically balanced westward currents in both side of the equatorial wave-guide (within 5 degree bands). Once these currents reach the western Pacific coast, they feed the Equatorial undercurrent (EUC...

  7. Diurnal variability of upper ocean temperature and heat budget in ...

    Indian Academy of Sciences (India)

    Time-series data on upper-ocean temperature, Vessel-Mounted Acoustic Doppler Current Profiler (VM-ADCP) measured currents and surface meteorological parameters have been obtained for the first time in the southern Bay of Bengal at 7° N, 10° N, and 13° N locations along 87° E during October - November, 1998 ...

  8. Biological oceanography of the red oceanic system

    Science.gov (United States)

    Theil, Hjalmar; Weikert, Horst

    1. In 1977, 1979 and 1980-81, investigations were carried out which aimed at evaluating the potential risks from mining metalliferous muds precipating in the Atlantis II Deep of the central Red Sea. This environmental research was initiated by the Saudi Sudanese Red Sea Joint Commission in order to avoid any danger for the Red Sea ecosystem. The broad environmental research programme coherent studies in physical, chemical, biological, and geological oceanography as well as toxicological investigations in the oceanic and in reef zones. We summarise the results from our biological fiels studies in the open sea. 2. The biological investigations were concentrated on the area of the Atlantis II Deep. Benthos was sampled between 700-2000m. For comparison a few samples were also taken further north in the central Red Sea, and to east and west along the flanking deep terraces (500-1000m). Plankton studies covered the total water column above the Deep, and were extended along the axial through to north and south. 3. Benthos sampling was carried out using a heavy closing trawl, a large box grab (box size 50 × 50 cm), Van Veen grabs and traps; photographic surveys were made a phototrap and a photosled. Community respiration was measured with a ship-board method using grab subsamples. Nutrient concentrations, seston and phytoplankton standing stocks as well as in situ primary production were determined from hydrocast samples. Data on zooplankton and micronekton composition and standing stock were obtained from samples collected using different multiple opening-and-closing nets equipped with 100 μm, 300 μm, and 1000 μm mesh sizes. Daily and ontogenetical vertical migration patterns were studied by comparisons of data from midday and midnight tows. 4. Throughout the whole area the sediment is a pteropod ooze containing low contentrations of organic matter; measured organic carbon and nitrogen contents were 0.5 and 0.05% respectively, and chloroplastic pigment equivalents

  9. Skill Assessment in Ocean Biological Data Assimilation

    Science.gov (United States)

    Gregg, Watson W.; Friedrichs, Marjorie A. M.; Robinson, Allan R.; Rose, Kenneth A.; Schlitzer, Reiner; Thompson, Keith R.; Doney, Scott C.

    2008-01-01

    There is growing recognition that rigorous skill assessment is required to understand the ability of ocean biological models to represent ocean processes and distributions. Statistical analysis of model results with observations represents the most quantitative form of skill assessment, and this principle serves as well for data assimilation models. However, skill assessment for data assimilation requires special consideration. This is because there are three sets of information in the free-run model, data, and the assimilation model, which uses Data assimilation information from both the flee-run model and the data. Intercom parison of results among the three sets of information is important and useful for assessment, but is not conclusive since the three information sets are intertwined. An independent data set is necessary for an objective determination. Other useful measures of ocean biological data assimilation assessment include responses of unassimilated variables to the data assimilation, performance outside the prescribed region/time of interest, forecasting, and trend analysis. Examples of each approach from the literature are provided. A comprehensive list of ocean biological data assimilation and their applications of skill assessment, in both ecosystem/biogeochemical and fisheries efforts, is summarized.

  10. Satellite Ocean Biology: Past, Present, Future

    Science.gov (United States)

    McClain, Charles R.

    2012-01-01

    Since 1978 when the first satellite ocean color proof-of-concept sensor, the Nimbus-7 Coastal Zone Color Scanner, was launched, much progress has been made in refining the basic measurement concept and expanding the research applications of global satellite time series of biological and optical properties such as chlorophyll-a concentrations. The seminar will review the fundamentals of satellite ocean color measurements (sensor design considerations, on-orbit calibration, atmospheric corrections, and bio-optical algorithms), scientific results from the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) and Moderate resolution Imaging Spectroradiometer (MODIS) missions, and the goals of future NASA missions such as PACE, the Aerosol, Cloud, Ecology (ACE), and Geostationary Coastal and Air Pollution Events (GeoCAPE) missions.

  11. Magnetization of lower oceanic crust and upper mantle

    Science.gov (United States)

    Kikawa, E.

    2004-05-01

    The location of the magnetized rocks of the oceanic crust that are responsible for sea-floor spreading magnetic anomalies has been a long-standing problem in geophysics. The recognition of these anomalies was a key stone in the development of the theory of plate tectonics. Our present concept of oceanic crustal magnetization is much more complex than the original, uniformly magnetized model of Vine-Matthews-Morley Hypothesis. Magnetic inversion studies indicated that the upper oceanic extrusive layer (Layer 2A of 0.5km thick) was the only magnetic layer and that it was not necessary to postulate any contribution from deeper parts of oceanic crust. Direct measurements of the magnetic properties of the rocks recovered from the sea floor, however, have shown that the magnetization of Layer 2A, together with the observations that this layer could record geomagnetic field reversals within a vertical section, is insufficient to give the required size of observed magnetic anomalies and that some contribution from lower intrusive rocks is necessary. Magnetization of oceanic intrusive rocks were observed to be reasonably high enough to contribute to sea-floor spreading magnetic anomalies, but were considered somewhat equivocal until late 1980Os, in part because studies had been conducted on unoriented dredged and ophiolite samples and on intermittent DSDP/ODP cores. Since ODP Leg 118 that cored and recovered continuous 500m of oceanic intrusive layer at Site 735B, Southwest Indian Ridge with an extremely high recovery of 87 percent, there have been several ODP Legs (legs 147, 153, 176, 179 and 209) that were devoted to drilling gabbroic rocks and peridotites. In terms of the magnetization intensities, all of the results obtained from these ODP Legs were supportive of the model that a significant contribution must come from gabbros and peridotites and the source of the lineated magnetic anomalies must reside in most of the oceanic crust as well as crust-mantle boundary

  12. Upper Oceanic Energy Response to Tropical Cyclone Passage

    Science.gov (United States)

    2013-04-15

    lagged SST cooling is approximately 0.78C for a ‘‘typical’’ TC at 308 latitude, whereas the same storm results in 10-day (30-day) lagged decreases of...during tropical to extratropical transition). The scenario above led to the development of the TC potential intensity (PI) thesis, an important...is approximately 0.78C for a ??typical?? TC at 308 latitude, whereas the same storm results in 10-day (30-day) lagged decreases of upper oceanic

  13. Upper Ocean Evolution Across the Beaufort Sea Marginal Ice Zone

    Science.gov (United States)

    Lee, C.; Rainville, L.; Gobat, J. I.; Perry, M. J.; Freitag, L. E.; Webster, S.

    2016-12-01

    The observed reduction of Arctic summertime sea ice extent and expansion of the marginal ice zone (MIZ) have profound impacts on the balance of processes controlling sea ice evolution, including the introduction of several positive feedback mechanisms that may act to accelerate melting. Examples of such feedbacks include increased upper ocean warming though absorption of solar radiation, elevated internal wave energy and mixing that may entrain heat stored in subsurface watermasses (e.g., the relatively warm Pacific Summer and Atlantic waters), and elevated surface wave energy that acts to deform and fracture sea ice. Spatial and temporal variability in ice properties and open water fraction impact these processes. To investigate how upper ocean structure varies with changing ice cover, how the balance of processes shift as a function of ice fraction and distance from open water, and how these processes impact sea ice evolution, a network of autonomous platforms sampled the atmosphere-ice-ocean system in the Beaufort, beginning in spring, well before the start of melt, and ending with the autumn freeze-up. Four long-endurance autonomous Seagliders occupied sections that extended from open water, through the marginal ice zone, deep into the pack during summer 2014 in the Beaufort Sea. Gliders penetrated up to 200 km into the ice pack, under complete ice cover for up to 10 consecutive days. Sections reveal strong fronts where cold, ice-covered waters meet waters that have been exposed to solar warming, and O(10 km) scale eddies near the ice edge. In the pack, Pacific Summer Water and a deep chlorophyll maximum form distinct layers at roughly 60 m and 80 m, respectively, which become increasingly diffuse late in the season as they progress through the MIZ and into open water. Stratification just above the Pacific Summer Water rapidly weakens near the ice edge and temperature variance increases, likely due to mixing or energetic vertical exchange associated with strong

  14. Dynamic Biological Functioning Important for Simulating and Stabilizing Ocean Biogeochemistry

    Science.gov (United States)

    Buchanan, P. J.; Matear, R. J.; Chase, Z.; Phipps, S. J.; Bindoff, N. L.

    2018-04-01

    The biogeochemistry of the ocean exerts a strong influence on the climate by modulating atmospheric greenhouse gases. In turn, ocean biogeochemistry depends on numerous physical and biological processes that change over space and time. Accurately simulating these processes is fundamental for accurately simulating the ocean's role within the climate. However, our simulation of these processes is often simplistic, despite a growing understanding of underlying biological dynamics. Here we explore how new parameterizations of biological processes affect simulated biogeochemical properties in a global ocean model. We combine 6 different physical realizations with 6 different biogeochemical parameterizations (36 unique ocean states). The biogeochemical parameterizations, all previously published, aim to more accurately represent the response of ocean biology to changing physical conditions. We make three major findings. First, oxygen, carbon, alkalinity, and phosphate fields are more sensitive to changes in the ocean's physical state. Only nitrate is more sensitive to changes in biological processes, and we suggest that assessment protocols for ocean biogeochemical models formally include the marine nitrogen cycle to assess their performance. Second, we show that dynamic variations in the production, remineralization, and stoichiometry of organic matter in response to changing environmental conditions benefit the simulation of ocean biogeochemistry. Third, dynamic biological functioning reduces the sensitivity of biogeochemical properties to physical change. Carbon and nitrogen inventories were 50% and 20% less sensitive to physical changes, respectively, in simulations that incorporated dynamic biological functioning. These results highlight the importance of a dynamic biology for ocean properties and climate.

  15. Comparative Analysis of Upper Ocean Heat Content Variability from Ensemble Operational Ocean Analyses

    Science.gov (United States)

    Xue, Yan; Balmaseda, Magdalena A.; Boyer, Tim; Ferry, Nicolas; Good, Simon; Ishikawa, Ichiro; Rienecker, Michele; Rosati, Tony; Yin, Yonghong; Kumar, Arun

    2012-01-01

    Upper ocean heat content (HC) is one of the key indicators of climate variability on many time-scales extending from seasonal to interannual to long-term climate trends. For example, HC in the tropical Pacific provides information on thermocline anomalies that is critical for the longlead forecast skill of ENSO. Since HC variability is also associated with SST variability, a better understanding and monitoring of HC variability can help us understand and forecast SST variability associated with ENSO and other modes such as Indian Ocean Dipole (IOD), Pacific Decadal Oscillation (PDO), Tropical Atlantic Variability (TAV) and Atlantic Multidecadal Oscillation (AMO). An accurate ocean initialization of HC anomalies in coupled climate models could also contribute to skill in decadal climate prediction. Errors, and/or uncertainties, in the estimation of HC variability can be affected by many factors including uncertainties in surface forcings, ocean model biases, and deficiencies in data assimilation schemes. Changes in observing systems can also leave an imprint on the estimated variability. The availability of multiple operational ocean analyses (ORA) that are routinely produced by operational and research centers around the world provides an opportunity to assess uncertainties in HC analyses, to help identify gaps in observing systems as they impact the quality of ORAs and therefore climate model forecasts. A comparison of ORAs also gives an opportunity to identify deficiencies in data assimilation schemes, and can be used as a basis for development of real-time multi-model ensemble HC monitoring products. The OceanObs09 Conference called for an intercomparison of ORAs and use of ORAs for global ocean monitoring. As a follow up, we intercompared HC variations from ten ORAs -- two objective analyses based on in-situ data only and eight model analyses based on ocean data assimilation systems. The mean, annual cycle, interannual variability and longterm trend of HC have

  16. Upper ocean response to the passage of two sequential typhoons

    Science.gov (United States)

    Wu, Renhao; Li, Chunyan

    2018-02-01

    Two sequential typhoons, separated by five days, Chan-hom and Nangka in the summer of 2015, provided a unique opportunity to study the oceanic response and cold wake evolution. The upper ocean response to the passage of these two typhoons was investigated using multi-satellite, Argo float data and HYCOM global model output. The sea surface cooling (SSC) induced by Chan-hom was gradually enhanced along its track when the storm was intensified while moving over the ocean with shallow mixed layer. The location of maximum cooling of sea surface was determined by the storm's translation speed as well as pre-typhoon oceanic conditions. As a fast-moving storm, Chan-hom induced significant SSC on the right side of its track. Localized maximum cooling patches are found over a cyclonic eddy (CE). An analysis of data from Argo floats near the track of Chan-hom demonstrated that the mixed layer temperature (MLT) and mixed layer depth (MLD) had more variabilities on the right side than those on the left side of Chan-hom's track, while mixed layer salinity (MLS) response was different from those of MLT and MLD with an increase in salinity to the right side and a decrease in salinity to the left side of the track. Subsequently, because of the remnant effect of Chan-hom, the strong upwelling induced by Typhoon Nangka, the pre-existing CE as well as a slow translation speed (process. The enhancement of chlorophyll-a concentrations was also noticed at both the CE region and close to Chan-hom's track.

  17. Biological responses of sharks to ocean acidification.

    Science.gov (United States)

    Rosa, Rui; Rummer, Jodie L; Munday, Philip L

    2017-03-01

    Sharks play a key role in the structure of marine food webs, but are facing major threats due to overfishing and habitat degradation. Although sharks are also assumed to be at relatively high risk from climate change due to a low intrinsic rate of population growth and slow rates of evolution, ocean acidification (OA) has not, until recently, been considered a direct threat. New studies have been evaluating the potential effects of end-of-century elevated CO 2 levels on sharks and their relatives' early development, physiology and behaviour. Here, we review those findings and use a meta-analysis approach to quantify the overall direction and magnitude of biological responses to OA in the species of sharks that have been investigated to date. While embryo survival and development time are mostly unaffected by elevated CO 2 , there are clear effects on body condition, growth, aerobic potential and behaviour (e.g. lateralization, hunting and prey detection). Furthermore, studies to date suggest that the effects of OA could be as substantial as those due to warming in some species. A major limitation is that all past studies have involved relatively sedentary, benthic sharks that are capable of buccal ventilation-no studies have investigated pelagic sharks that depend on ram ventilation. Future research should focus on species with different life strategies (e.g. pelagic, ram ventilators), climate zones (e.g. polar regions), habitats (e.g. open ocean), and distinct phases of ontogeny in order to fully predict how OA and climate change will impact higher-order predators and therefore marine ecosystem dynamics. © 2017 The Author(s).

  18. Marine Biology Activities. Ocean Related Curriculum Activities.

    Science.gov (United States)

    Pauls, John

    The ocean affects all of our lives. Therefore, awareness of and information about the interconnections between humans and oceans are prerequisites to making sound decisions for the future. Project ORCA (Ocean Related Curriculum Activities) has developed interdisciplinary curriculum materials designed to meet the needs of students and teachers…

  19. Surface wave effect on the upper ocean in marine forecast

    Science.gov (United States)

    Wang, Guansuo; Qiao, Fangli; Xia, Changshui; Zhao, Chang

    2015-04-01

    An Operational Coupled Forecast System for the seas off China and adjacent (OCFS-C) is constructed based on the paralleled wave-circulation coupled model, which is tested with comprehensive experiments and operational since November 1st, 2007. The main feature of the system is that the wave-induced mixing is considered in circulation model. Daily analyses and three day forecasts of three-dimensional temperature, salinity, currents and wave height are produced. Coverage is global at 1/2 degreed resolution with nested models up to 1/24 degree resolution in China Sea. Daily remote sensing sea surface temperatures (SST) are taken to relax to an analytical product as hot restarting fields for OCFS-C by the Nudging techniques. Forecasting-data inter-comparisons are performed to measure the effectiveness of OCFS-C in predicting upper-ocean quantities including SST, mixed layer depth (MLD) and subsurface temperature. The variety of performance with lead time and real-time is discussed as well using the daily statistic results for SST between forecast and satellite data. Several buoy observations and many Argo profiles are used for this validation. Except the conventional statistical metrics, non-dimension skill scores (SS) is taken to estimate forecast skill. Model SST comparisons with more one year-long SST time series from 2 buoys given a large SS value (more than 0.90). And skill in predicting the seasonal variability of SST is confirmed. Model subsurface temperature comparisons with that from a lot of Argo profiles indicated that OCFS-C has low skill in predicting subsurface temperatures between 80m and 120m. Inter-comparisons of MLD reveal that MLD from model is shallower than that from Argo profiles by about 12m. QCFS-C is successful and steady in predicting MLD. The daily statistic results for SST between 1-d, 2-d and 3-d forecast and data is adopted to describe variability of Skill in predicting SST with lead time or real time. In a word QCFS-C shows reasonable

  20. Hydrological structure and biological productivity of the tropical Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Muraleedharan, U.D.; Muraleedharan, P.M.

    Hydrological structure analyses of regions in the tropical Atlantic Ocean have consistently revealed the existence of a typical tropical structure characterized by a nitrate-depleted mixed layer above the thermocline. The important biological...

  1. Can oceanic reanalyses be used to assess recent anthropogenic changes and low-frequency internal variability of upper ocean temperature?

    Energy Technology Data Exchange (ETDEWEB)

    Corre, L.; Terray, L.; Weaver, A. [Cerfacs-CNRS, Toulouse (France); Balmaseda, M. [E.C.M.W.F, Reading (United Kingdom); Ribes, A. [CNRM-GAME, Meteo France-CNRS, Toulouse (France)

    2012-03-15

    A multivariate analysis of the upper ocean thermal structure is used to examine the recent long-term changes and decadal variability in the upper ocean heat content as represented by model-based ocean reanalyses and a model-independent objective analysis. The three variables used are the mean temperature above the 14 C isotherm, its depth and a fixed depth mean temperature (250 m mean temperature). The mean temperature above the 14 C isotherm is a convenient, albeit simple, way to isolate thermodynamical changes by filtering out dynamical changes related to thermocline vertical displacements. The global upper ocean observations and reanalyses exhibit very similar warming trends (0.045 C per decade) over the period 1965-2005, superimposed with marked decadal variability in the 1970s and 1980s. The spatial patterns of the regression between indices (representative of anthropogenic changes and known modes of internal decadal variability), and the three variables associated with the ocean heat content are used as fingerprint to separate out the different contributions. The choice of variables provides information about the local heat absorption, vertical distribution and horizontal redistribution of heat, this latter being suggestive of changes in ocean circulation. The discrepancy between the objective analysis and the reanalyses, as well as the spread among the different reanalyses, are used as a simple estimate of ocean state uncertainties. Two robust findings result from this analysis: (1) the signature of anthropogenic changes is qualitatively different from those of the internal decadal variability associated to the Pacific Interdecadal Oscillation and the Atlantic Meridional Oscillation, and (2) the anthropogenic changes in ocean heat content do not only consist of local heat absorption, but are likely related with changes in the ocean circulation, with a clear shallowing of the tropical thermocline in the Pacific and Indian oceans. (orig.)

  2. An Ocean Biology-induced Negative Feedback on ENSO in the Tropical Pacific Climate System

    Science.gov (United States)

    Zhang, R. H.

    2016-02-01

    Biological conditions in the tropical Pacific Ocean (e.g., phytoplankton biomass) are strongly regulated by physical changes associated with the El Niño-Southern Oscillation (ENSO). The existence and variation of phytoplankton biomass, in turn, act to modulate the vertical penetration of the incoming sunlight in the upper ocean, presenting an ocean biology-induced heating (OBH) effect on the climate system. Previously, a penetration depth of solar radiation in the upper ocean (Hp) is defined to describe the related bio-climate connections. Parameterized in terms of its relationship with the sea surface temperature (SST) in the tropical Pacific, an empirical model for interannual Hp variability has been derived from remotely sensed ocean color data, which is incorporated into a hybrid coupled model (HCM) to represent OBH effects. In this paper, various HCM experiments are performed to demonstrate the bio-feedback onto ENSO, including a climatological Hp run (in which Hp is prescribed as seasonally varying only), interannual Hp runs (with different intensities of interannually varying OBH effects), and a run in which the sign of the OBH effect is artificially reversed. Significant modulating impacts on interannual variability are found in the HCM, characterized by a negative feedback between ocean biology and the climate system in the tropical Pacific: the stronger the OBH feedback, the weaker the interannual variability. Processes involved in the feedback are analyzed; it is illustrated that the SST is modulated indirectly by ocean dynamical processes induced by OBH. The significance and implication of the OBH effects are discussed for their roles in ENSO variability and model biases in the tropical Pacific.

  3. The Impacts of Daily Surface Forcing in the Upper Ocean over Tropical Pacific: A Numerical Study

    Science.gov (United States)

    Sui, C.-H.; Rienecker, Michele M.; Li, Xiaofan; Lau, William K.-M.; Laszlo, Istvan; Pinker, Rachel T.

    2001-01-01

    Tropical Pacific Ocean is an important region that affects global climate. How the ocean responds to the atmospheric surface forcing (surface radiative, heat and momentum fluxes) is a major topic in oceanographic research community. The ocean becomes warm when more heat flux puts into the ocean. The monthly mean forcing has been used in the past years since daily forcing was unavailable due to the lack of observations. The daily forcing is now available from the satellite measurements. This study investigates the response of the upper ocean over tropical Pacific to the daily atmospheric surface forcing. The ocean surface heat budgets are calculated to determine the important processes for the oceanic response. The differences of oceanic responses between the eastern and western Pacific are intensively discussed.

  4. SPURS: Salinity Processes in the Upper-Ocean Regional Study: THE NORTH ATLANTIC EXPERIMENT

    Science.gov (United States)

    Lindstrom, Eric; Bryan, Frank; Schmitt, Ray

    2015-01-01

    In this special issue of Oceanography, we explore the results of SPURS-1, the first part of the ocean process study Salinity Processes in the Upper-ocean Regional Study (SPURS). The experiment was conducted between August 2012 and October 2013 in the subtropical North Atlantic and was the first of two experiments (SPURS come in pairs!). SPURS-2 is planned for 20162017 in the tropical eastern Pacific Ocean.

  5. Ocean Biological Pump Sensitivities and Implications for Climate Change Impacts

    Science.gov (United States)

    Romanou, Anastasia

    2013-01-01

    The ocean is one of the principal reservoirs of CO2, a greenhouse gas, and therefore plays a crucial role in regulating Earth's climate. Currently, the ocean sequesters about a third of anthropogenic CO2 emissions, mitigating the human impact on climate. At the same time, the deeper ocean represents the largest carbon pool in the Earth System and processes that describe the transfer of carbon from the surface of the ocean to depth are intimately linked to the effectiveness of carbon sequestration.The ocean biological pump (OBP), which involves several biogeochemical processes, is a major pathway for transfer of carbon from the surface mixed layer into the ocean interior. About 75 of the carbon vertical gradient is due to the carbon pump with only 25 attributed to the solubility pump. However, the relative importance and role of the two pumps is poorly constrained. OBP is further divided to the organic carbon pump (soft tissue pump) and the carbonate pump, with the former exporting about 10 times more carbon than the latter through processes like remineralization.Major uncertainties about OBP, and hence in the carbon uptake and sequestration, stem from uncertainties in processes involved in OBP such as particulate organicinorganic carbon sinkingsettling, remineralization, microbial degradation of DOC and uptakegrowth rate changes of the ocean biology. The deep ocean is a major sink of atmospheric CO2 in scales of hundreds to thousands of years, but how the export efficiency (i.e. the fraction of total carbon fixation at the surface that is transported at depth) is affected by climate change remains largely undetermined. These processes affect the ocean chemistry (alkalinity, pH, DIC, particulate and dissolved organic carbon) as well as the ecology (biodiversity, functional groups and their interactions) in the ocean. It is important to have a rigorous, quantitative understanding of the uncertainties involved in the observational measurements, the models and the

  6. Multi-model attribution of upper-ocean temperature changes using an isothermal approach

    Science.gov (United States)

    Weller, Evan; Min, Seung-Ki; Palmer, Matthew D.; Lee, Donghyun; Yim, Bo Young; Yeh, Sang-Wook

    2016-06-01

    Both air-sea heat exchanges and changes in ocean advection have contributed to observed upper-ocean warming most evident in the late-twentieth century. However, it is predominantly via changes in air-sea heat fluxes that human-induced climate forcings, such as increasing greenhouse gases, and other natural factors such as volcanic aerosols, have influenced global ocean heat content. The present study builds on previous work using two different indicators of upper-ocean temperature changes for the detection of both anthropogenic and natural external climate forcings. Using simulations from phase 5 of the Coupled Model Intercomparison Project, we compare mean temperatures above a fixed isotherm with the more widely adopted approach of using a fixed depth. We present the first multi-model ensemble detection and attribution analysis using the fixed isotherm approach to robustly detect both anthropogenic and natural external influences on upper-ocean temperatures. Although contributions from multidecadal natural variability cannot be fully removed, both the large multi-model ensemble size and properties of the isotherm analysis reduce internal variability of the ocean, resulting in better observation-model comparison of temperature changes since the 1950s. We further show that the high temporal resolution afforded by the isotherm analysis is required to detect natural external influences such as volcanic cooling events in the upper-ocean because the radiative effect of volcanic forcings is short-lived.

  7. Intraseasonal variability of upper-ocean currents and photosynthetic primary production along the U.S. west coast associated with the Madden-Julian Oscillation

    Science.gov (United States)

    Barrett, B.; Davies, A. R.; Steppe, C. N.; Hackbarth, C.

    2017-12-01

    In the first part of this study, time-lagged composites of upper-ocean currents from February to May of 1993-2016 were binned by active phase of the leading atmospheric mode of intraseasonal variability, the Madden-Julian Oscillation (MJO). Seven days after the convectively active phase of the MJO enters the tropical Indian Ocean, anomalously strong south-southeastward upper-ocean currents are observed along the majority of U.S. west coast. Seven days after the convectively active phase enters the tropical western Pacific Ocean, upper-ocean current anomalies reverse along the U.S. west coast, with weaker southward flow. A physical pathway to the ocean was found for both of these: (a) tropical MJO convection modulates upper-tropospheric heights and circulation over the Pacific Ocean; (b) those anomalous atmospheric heights adjust the strength and position of the Aleutian Low and Hawaiian High; (c) surface winds change in response to the adjusted atmospheric pressure patterns; and (d) those surface winds project onto upper-ocean currents. In the second part of this study, we investigated if the MJO modulated intraseasonal variability of surface wind forcing and upper-ocean currents projected onto phytoplankton abundance along the U.S. west coast. Following a similar methodology, time-lagged, level 3 chlorophyll-a satellite products (a proxy for photosynthetic primary production) were binned by active MJO phase and analyzed for statistical significance using the Student's t test. Results suggest that intraseasonal variability of biological production along the U.S. west coast may be linked to the MJO, particularly since the time scale of the life cycle of phytoplankton is similar to the time scale of the MJO.

  8. Influence of upper ocean stratification interannual variability on tropical cyclones

    Digital Repository Service at National Institute of Oceanography (India)

    Vincent, E.M.; Emanuel, K.A; Lengaigne, M.; Vialard, J.; Madec, G.

    in each TC-prone region. While subsurface oceanic variations do not significantly affect the number of moderate (Category 3 or less) TCs, they do induce a 30% change of Category 5 TC-days globally, and a 70% change for TCs exceeding 85 m s2-1

  9. Biological production in the Indian Ocean upwelling zones - Part 1: refined estimation via the use of a variable compensation depth in ocean carbon models

    Science.gov (United States)

    Geethalekshmi Sreeush, Mohanan; Valsala, Vinu; Pentakota, Sreenivas; Venkata Siva Rama Prasad, Koneru; Murtugudde, Raghu

    2018-04-01

    Biological modelling approach adopted by the Ocean Carbon-Cycle Model Intercomparison Project (OCMIP-II) provided amazingly simple but surprisingly accurate rendition of the annual mean carbon cycle for the global ocean. Nonetheless, OCMIP models are known to have seasonal biases which are typically attributed to their bulk parameterisation of compensation depth. Utilising the criteria of surface Chl a-based attenuation of solar radiation and the minimum solar radiation required for production, we have proposed a new parameterisation for a spatially and temporally varying compensation depth which captures the seasonality in the production zone reasonably well. This new parameterisation is shown to improve the seasonality of CO2 fluxes, surface ocean pCO2, biological export and new production in the major upwelling zones of the Indian Ocean. The seasonally varying compensation depth enriches the nutrient concentration in the upper ocean yielding more faithful biological exports which in turn leads to accurate seasonality in the carbon cycle. The export production strengthens by ˜ 70 % over the western Arabian Sea during the monsoon period and achieves a good balance between export and new production in the model. This underscores the importance of having a seasonal balance in the model export and new productions for a better representation of the seasonality of the carbon cycle over upwelling regions. The study also implies that both the biological and solubility pumps play an important role in the Indian Ocean upwelling zones.

  10. A mechanistic model of an upper bound on oceanic carbon export as a function of mixed layer depth and temperature

    Directory of Open Access Journals (Sweden)

    Z. Li

    2017-11-01

    Full Text Available Export production reflects the amount of organic matter transferred from the ocean surface to depth through biological processes. This export is in large part controlled by nutrient and light availability, which are conditioned by mixed layer depth (MLD. In this study, building on Sverdrup's critical depth hypothesis, we derive a mechanistic model of an upper bound on carbon export based on the metabolic balance between photosynthesis and respiration as a function of MLD and temperature. We find that the upper bound is a positively skewed bell-shaped function of MLD. Specifically, the upper bound increases with deepening mixed layers down to a critical depth, beyond which a long tail of decreasing carbon export is associated with increasing heterotrophic activity and decreasing light availability. We also show that in cold regions the upper bound on carbon export decreases with increasing temperature when mixed layers are deep, but increases with temperature when mixed layers are shallow. A meta-analysis shows that our model envelopes field estimates of carbon export from the mixed layer. When compared to satellite export production estimates, our model indicates that export production in some regions of the Southern Ocean, particularly the subantarctic zone, is likely limited by light for a significant portion of the growing season.

  11. A biologically relevant method for considering patterns of oceanic retention in the Southern Ocean

    Science.gov (United States)

    Mori, Mao; Corney, Stuart P.; Melbourne-Thomas, Jessica; Klocker, Andreas; Sumner, Michael; Constable, Andrew

    2017-12-01

    Many marine species have planktonic forms - either during a larval stage or throughout their lifecycle - that move passively or are strongly influenced by ocean currents. Understanding these patterns of movement is important for informing marine ecosystem management and for understanding ecological processes generally. Retention of biological particles in a particular area due to ocean currents has received less attention than transport pathways, particularly for the Southern Ocean. We present a method for modelling retention time, based on the half-life for particles in a particular region, that is relevant for biological processes. This method uses geostrophic velocities at the ocean surface, derived from 23 years of satellite altimetry data (1993-2016), to simulate the advection of passive particles during the Southern Hemisphere summer season (from December to March). We assess spatial patterns in the retention time of passive particles and evaluate the processes affecting these patterns for the Indian sector of the Southern Ocean. Our results indicate that the distribution of retention time is related to bathymetric features and the resulting ocean dynamics. Our analysis also reveals a moderate level of consistency between spatial patterns of retention time and observations of Antarctic krill (Euphausia superba) distribution.

  12. Preconditioning of Antarctic maximum sea-ice extent by upper-ocean stratification on a seasonal timescale

    OpenAIRE

    Su, Zhan

    2017-01-01

    This study uses an observationally constrained and dynamically consistent ocean and sea ice state estimate. The author presents a remarkable agreement between the location of the edge of Antarctic maximum sea ice extent, reached in September, and the narrow transition band for the upper ocean (0–100 m depths) stratification, as early as April to June. To the south of this edge, the upper ocean has high stratification, which forbids convective fluxes to cross through; consequently, the ocean h...

  13. Student Perceived and Determined Knowledge of Biology Concepts in an Upper-Level Biology Course

    Science.gov (United States)

    Ziegler, Brittany; Montplaisir, Lisa

    2014-01-01

    Students who lack metacognitive skills can struggle with the learning process. To be effective learners, students should recognize what they know and what they do not know. This study examines the relationship between students' perception of their knowledge and determined knowledge in an upper-level biology course utilizing a pre/posttest…

  14. Global warming-induced upper-ocean freshening and the intensification of super typhoons.

    Science.gov (United States)

    Balaguru, Karthik; Foltz, Gregory R; Leung, L Ruby; Emanuel, Kerry A

    2016-11-25

    Super typhoons (STYs), intense tropical cyclones of the western North Pacific, rank among the most destructive natural hazards globally. The violent winds of these storms induce deep mixing of the upper ocean, resulting in strong sea surface cooling and making STYs highly sensitive to ocean density stratification. Although a few studies examined the potential impacts of changes in ocean thermal structure on future tropical cyclones, they did not take into account changes in near-surface salinity. Here, using a combination of observations and coupled climate model simulations, we show that freshening of the upper ocean, caused by greater rainfall in places where typhoons form, tends to intensify STYs by reducing their ability to cool the upper ocean. We further demonstrate that the strengthening effect of this freshening over the period 1961-2008 is ∼53% stronger than the suppressive effect of temperature, whereas under twenty-first century projections, the positive effect of salinity is about half of the negative effect of ocean temperature changes.

  15. Estuary-ocean connectivity: fast physics, slow biology.

    Science.gov (United States)

    Raimonet, Mélanie; Cloern, James E

    2017-06-01

    Estuaries are connected to both land and ocean so their physical, chemical, and biological dynamics are influenced by climate patterns over watersheds and ocean basins. We explored climate-driven oceanic variability as a source of estuarine variability by comparing monthly time series of temperature and chlorophyll-a inside San Francisco Bay with those in adjacent shelf waters of the California Current System (CCS) that are strongly responsive to wind-driven upwelling. Monthly temperature fluctuations inside and outside the Bay were synchronous, but their correlations weakened with distance from the ocean. These results illustrate how variability of coastal water temperature (and associated properties such as nitrate and oxygen) propagates into estuaries through fast water exchanges that dissipate along the estuary. Unexpectedly, there was no correlation between monthly chlorophyll-a variability inside and outside the Bay. However, at the annual scale Bay chlorophyll-a was significantly correlated with the Spring Transition Index (STI) that sets biological production supporting fish recruitment in the CCS. Wind forcing of the CCS shifted in the late 1990s when the STI advanced 40 days. This shift was followed, with lags of 1-3 years, by 3- to 19-fold increased abundances of five ocean-produced demersal fish and crustaceans and 2.5-fold increase of summer chlorophyll-a in the Bay. These changes reflect a slow biological process of estuary-ocean connectivity operating through the immigration of fish and crustaceans that prey on bivalves, reduce their grazing pressure, and allow phytoplankton biomass to build. We identified clear signals of climate-mediated oceanic variability in this estuary and discovered that the response patterns vary with the process of connectivity and the timescale of ocean variability. This result has important implications for managing nutrient inputs to estuaries connected to upwelling systems, and for assessing their responses to changing

  16. Influence of diatom diversity on the ocean biological carbon pump

    Science.gov (United States)

    Tréguer, Paul; Bowler, Chris; Moriceau, Brivaela; Dutkiewicz, Stephanie; Gehlen, Marion; Aumont, Olivier; Bittner, Lucie; Dugdale, Richard; Finkel, Zoe; Iudicone, Daniele; Jahn, Oliver; Guidi, Lionel; Lasbleiz, Marine; Leblanc, Karine; Levy, Marina; Pondaven, Philippe

    2018-01-01

    Diatoms sustain the marine food web and contribute to the export of carbon from the surface ocean to depth. They account for about 40% of marine primary productivity and particulate carbon exported to depth as part of the biological pump. Diatoms have long been known to be abundant in turbulent, nutrient-rich waters, but observations and simulations indicate that they are dominant also in meso- and submesoscale structures such as fronts and filaments, and in the deep chlorophyll maximum. Diatoms vary widely in size, morphology and elemental composition, all of which control the quality, quantity and sinking speed of biogenic matter to depth. In particular, their silica shells provide ballast to marine snow and faecal pellets, and can help transport carbon to both the mesopelagic layer and deep ocean. Herein we show that the extent to which diatoms contribute to the export of carbon varies by diatom type, with carbon transfer modulated by the Si/C ratio of diatom cells, the thickness of the shells and their life strategies; for instance, the tendency to form aggregates or resting spores. Model simulations project a decline in the contribution of diatoms to primary production everywhere outside of the Southern Ocean. We argue that we need to understand changes in diatom diversity, life cycle and plankton interactions in a warmer and more acidic ocean in much more detail to fully assess any changes in their contribution to the biological pump.

  17. Climatology and seasonality of upper ocean salinity: a three-dimensional view from argo floats

    Science.gov (United States)

    Chen, Ge; Peng, Lin; Ma, Chunyong

    2018-03-01

    Primarily due to the constraints of observation technologies (both field and satellite measurements), our understanding of ocean salinity is much less mature compared to ocean temperature. As a result, the characterizations of the two most important properties of the ocean are unfortunately out of step: the former is one generation behind the latter in terms of data availability and applicability. This situation has been substantially changed with the advent of the Argo floats which measure the two variables simultaneously on a global scale since early this century. The first decade of Argo-acquired salinity data are analyzed here in the context of climatology and seasonality, yielding the following main findings for the global upper oceans. First, the six well-defined "salty pools" observed around ±20° in each hemisphere of the Pacific, Atlantic and Indian Oceans are found to tilt westward vertically from the sea surface to about 600 m depth, forming six saline cores within the subsurface oceans. Second, while potential temperature climatology decreases monotonically to the bottom in most places of the ocean, the vertical distribution of salinity can be classified into two categories: A double-halocline type forming immediately above and below the local salinity maximum around 100-150 m depths in the tropical and subtropical oceans, and a single halocline type existing at about 100 m depth in the extratropical oceans. Third, in contrast to the midlatitude dominance for temperature, seasonal variability of salinity in the oceanic mixed layer has a clear tropical dominance. Meanwhile, it is found that a two-mode structure with annual and semiannual periodicities can effectively penetrate through the upper ocean into a depth of 2000 m. Fourth, signature of Rossby waves is identified in the annual phase map of ocean salinity within 200-600 m depths in the tropical oceans, revealing a strongly co-varying nature of ocean temperature and salinity at specific depths

  18. Water Distribution in the Continental and Oceanic Upper Mantle

    Science.gov (United States)

    Peslier, Anne H.

    2015-01-01

    Nominally anhydrous minerals such as olivine, pyroxene and garnet can accommodate tens to hundreds of ppm H2O in the form of hydrogen bonded to structural oxygen in lattice defects. Although in seemingly small amounts, this water can significantly alter chemical and physical properties of the minerals and rocks. Water in particular can modify their rheological properties and its distribution in the mantle derives from melting and metasomatic processes and lithology repartition (pyroxenite vs peridotite). These effects will be examined here using Fourier transform infrared spectrometry (FTIR) water analyses on minerals from mantle xenoliths from cratons, plume-influenced cratons and oceanic settings. In particular, our results on xenoliths from three different cratons will be compared. Each craton has a different water distribution and only the mantle root of Kaapvaal has evidence for dry olivine at its base. This challenges the link between olivine water content and survival of Archean cratonic mantle, and questions whether xenoliths are representative of the whole cratonic mantle. We will also present our latest data on Hawaii and Tanzanian craton xenoliths which both suggest the intriguing result that mantle lithosphere is not enriched in water when it interacts with melts from deep mantle upwellings (plumes).

  19. Autonomous observations of the ocean biological carbon pump

    Energy Technology Data Exchange (ETDEWEB)

    Bishop, James K.B.

    2009-03-01

    Prediction of the substantial biologically mediated carbon flows in a rapidly changing and acidifying ocean requires model simulations informed by observations of key carbon cycle processes on the appropriate space and time scales. From 2000 to 2004, the National Oceanographic Partnership Program (NOPP) supported the development of the first low-cost fully-autonomous ocean profiling Carbon Explorers that demonstrated that year-round real-time observations of particulate organic carbon (POC) concentration and sedimentation could be achieved in the world's ocean. NOPP also initiated the development of a sensor for particulate inorganic carbon (PIC) suitable for operational deployment across all oceanographic platforms. As a result, PIC profile characterization that once required shipboard sample collection and shipboard or shore based laboratory analysis, is now possible to full ocean depth in real time using a 0.2W sensor operating at 24 Hz. NOPP developments further spawned US DOE support to develop the Carbon Flux Explorer, a free-vehicle capable of following hourly variations of particulate inorganic and organic carbon sedimentation from near surface to kilometer depths for seasons to years and capable of relaying contemporaneous observations via satellite. We have demonstrated the feasibility of real time - low cost carbon observations which are of fundamental value to carbon prediction and when further developed, will lead to a fully enhanced global carbon observatory capable of real time assessment of the ocean carbon sink, a needed constraint for assessment of carbon management policies on a global scale.

  20. Effects of hypoxia and ocean acidification on the upper thermal niche boundaries of coral reef fishes.

    Science.gov (United States)

    Ern, Rasmus; Johansen, Jacob L; Rummer, Jodie L; Esbaugh, Andrew J

    2017-07-01

    Rising ocean temperatures are predicted to cause a poleward shift in the distribution of marine fishes occupying the extent of latitudes tolerable within their thermal range boundaries. A prevailing theory suggests that the upper thermal limits of fishes are constrained by hypoxia and ocean acidification. However, some eurythermal fish species do not conform to this theory, and maintain their upper thermal limits in hypoxia. Here we determine if the same is true for stenothermal species. In three coral reef fish species we tested the effect of hypoxia on upper thermal limits, measured as critical thermal maximum (CT max ). In one of these species we also quantified the effect of hypoxia on oxygen supply capacity, measured as aerobic scope (AS). In this species we also tested the effect of elevated CO 2 (simulated ocean acidification) on the hypoxia sensitivity of CT max We found that CT max was unaffected by progressive hypoxia down to approximately 35 mmHg, despite a substantial hypoxia-induced reduction in AS. Below approximately 35 mmHg, CT max declined sharply with water oxygen tension ( P w O 2 ). Furthermore, the hypoxia sensitivity of CT max was unaffected by elevated CO 2 Our findings show that moderate hypoxia and ocean acidification do not constrain the upper thermal limits of these tropical, stenothermal fishes. © 2017 The Author(s).

  1. EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification

    Directory of Open Access Journals (Sweden)

    A.-M. Nisumaa

    2010-07-01

    Full Text Available The uptake of anthropogenic CO2 by the oceans has led to a rise in the oceanic partial pressure of CO2, and to a decrease in pH and carbonate ion concentration. This modification of the marine carbonate system is referred to as ocean acidification. Numerous papers report the effects of ocean acidification on marine organisms and communities but few have provided details concerning full carbonate chemistry and complementary observations. Additionally, carbonate system variables are often reported in different units, calculated using different sets of dissociation constants and on different pH scales. Hence the direct comparison of experimental results has been problematic and often misleading. The need was identified to (1 gather data on carbonate chemistry, biological and biogeochemical properties, and other ancillary data from published experimental data, (2 transform the information into common framework, and (3 make data freely available. The present paper is the outcome of an effort to integrate ocean carbonate chemistry data from the literature which has been supported by the European Network of Excellence for Ocean Ecosystems Analysis (EUR-OCEANS and the European Project on Ocean Acidification (EPOCA. A total of 185 papers were identified, 100 contained enough information to readily compute carbonate chemistry variables, and 81 data sets were archived at PANGAEA – The Publishing Network for Geoscientific & Environmental Data. This data compilation is regularly updated as an ongoing mission of EPOCA.

    Data access: http://doi.pangaea.de/10.1594/PANGAEA.735138

  2. Improved Upper Ocean/Sea Ice Modeling in the GISS GCM for Investigating Climate Change

    Science.gov (United States)

    1998-01-01

    This project built on our previous results in which we highlighted the importance of sea ice in overall climate sensitivity by determining that for both warming and cooling climates, when sea ice was not allowed to change, climate sensitivity was reduced by 35-40%. We also modified the GISS 8 deg x lO deg atmospheric GCM to include an upper-ocean/sea-ice model involving the Semtner three-layer ice/snow thermodynamic model, the Price et al. (1986) ocean mixed layer model and a general upper ocean vertical advection/diffusion scheme for maintaining and fluxing properties across the pycnocline. This effort, in addition to improving the sea ice representation in the AGCM, revealed a number of sensitive components of the sea ice/ocean system. For example, the ability to flux heat through the ice/snow properly is critical in order to resolve the surface temperature properly, since small errors in this lead to unrestrained climate drift. The present project, summarized in this report, had as its objectives: (1) introducing a series of sea ice and ocean improvements aimed at overcoming remaining weaknesses in the GCM sea ice/ocean representation, and (2) performing a series of sensitivity experiments designed to evaluate the climate sensitivity of the revised model to both Antarctic and Arctic sea ice, determine the sensitivity of the climate response to initial ice distribution, and investigate the transient response to doubling CO2.

  3. Improved Upper Ocean/Sea Ice Modeling in the GISS GCM for Investigating Climate Change

    Science.gov (United States)

    1997-01-01

    This project built on our previous results in which we highlighted the importance of sea ice in overall climate sensitivity by determining that for both warming and cooling climates, when sea ice was not allowed to change, climate sensitivity was reduced by 35-40%. We also modified the Goddard Institute for Space Studies (GISS) 8 deg x lO deg atmospheric General Circulation Model (GCM) to include an upper-ocean/sea-ice model involving the Semtner three-layer ice/snow thermodynamic model, the Price et al. (1986) ocean mixed layer model and a general upper ocean vertical advection/diffusion scheme for maintaining and fluxing properties across the pycnocline. This effort, in addition to improving the sea ice representation in the AGCM, revealed a number of sensitive components of the sea ice/ocean system. For example, the ability to flux heat through the ice/snow properly is critical in order to resolve the surface temperature properly, since small errors in this lead to unrestrained climate drift. The present project, summarized in this report, had as its objectives: (1) introducing a series of sea ice and ocean improvements aimed at overcoming remaining weaknesses in the GCM sea ice/ocean representation, and (2) performing a series of sensitivity experiments designed to evaluate the climate sensitivity of the revised model to both Antarctic and Arctic sea ice, determine the sensitivity of the climate response to initial ice distribution, and investigate the transient response to doubling CO2.

  4. A record of the last 460 thousand years of upper ocean stratification from the central Walvis Ridge, South Atlantic

    NARCIS (Netherlands)

    Scussolini, P.; Peeters, F.J.C.

    2013-01-01

    The upper branch of the Atlantic Meridional Overturning Circulation predominantly enters the Atlantic Ocean through the southeast, where the subtropical gyre is exposed to the influence of the Agulhas leakage (AL). To understand how the transfer of Indian Ocean waters via the AL affected the upper

  5. Student Perceived and Determined Knowledge of Biology Concepts in an Upper-Level Biology Course

    OpenAIRE

    Ziegler, Brittany; Montplaisir, Lisa

    2014-01-01

    Students who lack metacognitive skills can struggle with the learning process. To be effective learners, students should recognize what they know and what they do not know. This study examines the relationship between students’ perception of their knowledge and determined knowledge in an upper-level biology course utilizing a pre/posttest approach. Significant differences in students’ perception of their knowledge and their determined knowledge exist at the beginning (pretest) and end (postte...

  6. Near-island biological hotspots in barren ocean basins.

    Science.gov (United States)

    Gove, Jamison M; McManus, Margaret A; Neuheimer, Anna B; Polovina, Jeffrey J; Drazen, Jeffrey C; Smith, Craig R; Merrifield, Mark A; Friedlander, Alan M; Ehses, Julia S; Young, Charles W; Dillon, Amanda K; Williams, Gareth J

    2016-02-16

    Phytoplankton production drives marine ecosystem trophic-structure and global fisheries yields. Phytoplankton biomass is particularly influential near coral reef islands and atolls that span the oligotrophic tropical oceans. The paradoxical enhancement in phytoplankton near an island-reef ecosystem--Island Mass Effect (IME)--was first documented 60 years ago, yet much remains unknown about the prevalence and drivers of this ecologically important phenomenon. Here we provide the first basin-scale investigation of IME. We show that IME is a near-ubiquitous feature among a majority (91%) of coral reef ecosystems surveyed, creating near-island 'hotspots' of phytoplankton biomass throughout the upper water column. Variations in IME strength are governed by geomorphic type (atoll vs island), bathymetric slope, reef area and local human impacts (for example, human-derived nutrient input). These ocean oases increase nearshore phytoplankton biomass by up to 86% over oceanic conditions, providing basal energetic resources to higher trophic levels that support subsistence-based human populations.

  7. Response of upper ocean cooling off northeastern Taiwan to typhoon passages

    Science.gov (United States)

    Zheng, Zhe-Wen; Zheng, Quanan; Gopalakrishnan, Ganesh; Kuo, Yi-Chun; Yeh, Ting-Kuang

    2017-07-01

    A comprehensive investigation of the typhoon induced upper ocean processes and responses off northeastern Taiwan was conducted. Using the Regional Ocean Modeling System, the upper ocean responses of all typhoons striking Taiwan between 2005 and 2013 were simulated. In addition to Kuroshio intrusion, the present study demonstrates another important mechanism of typhoon induced near-inertial currents over the continental shelf of East China Sea, which can also trigger a distinct cooling (through entrainment mixing) within this region. Results indicate that the processes of typhoon inducing distinct cooling off northeastern Taiwan are conditional phenomena (only ∼12% of typhoons passing Taiwan triggered extreme cooling there). Subsequently, by executing a series of sensitivity experiments and systematic analyses on the behaviors and background conditions of all those typhoon cases, key criteria determining the occurrences of cooling through both mechanisms were elucidated. Occurrences of cooling through the Kuroshio intrusion mechanism are determined mainly by the strength of the local wind over northeastern Taiwan. A distinct cooling triggered by enhanced near-inertial currents is shown to be associated with the process of wind-current resonance. Both processes of Kuroshio intrusion and enhanced near-inertial currents are dominated by wind forcing rather than upper oceanic conditions. Based on the recent findings on the possible dynamic linkage between sea surface temperature near northeast Taiwan and local weather systems, the results elucidated in this study lay the foundation for further improvement in the regional weather prediction surrounding northeast Taiwan.

  8. Impact of Langmuir Turbulence on Upper Ocean Response to Hurricane Edouard: Model and Observations

    Science.gov (United States)

    Blair, A.; Ginis, I.; Hara, T.; Ulhorn, E.

    2017-12-01

    Tropical cyclone intensity is strongly affected by the air-sea heat flux beneath the storm. When strong storm winds enhance upper ocean turbulent mixing and entrainment of colder water from below the thermocline, the resulting sea surface temperature cooling may reduce the heat flux to the storm and weaken the storm. Recent studies suggest that this upper ocean turbulence is strongly affected by different sea states (Langmuir turbulence), which are highly complex and variable in tropical cyclone conditions. In this study, the upper ocean response under Hurricane Edouard (2014) is investigated using a coupled ocean-wave model with and without an explicit sea state dependent Langmuir turbulence parameterization. The results are compared with in situ observations of sea surface temperature and mixed layer depth from AXBTs, as well as satellite sea surface temperature observations. Overall, the model results of mixed layer deepening and sea surface temperature cooling under and behind the storm are consistent with observations. The model results show that the effects of sea state dependent Langmuir turbulence can be significant, particularly on the mixed layer depth evolution. Although available observations are not sufficient to confirm such effects, some observed trends suggest that the sea state dependent parameterization might be more accurate than the traditional (sea state independent) parameterization.

  9. Helicopter-based lidar system for monitoring the upper ocean and terrain surface

    International Nuclear Information System (INIS)

    Lee, Kwi Joo; Park, Youngsik; Bunkin, Alexey; Pershin, Serguei; Voliak, Konstantin; Nunes, Raul

    2002-01-01

    A compact helicopter-based lidar system is developed and tested under laboratory and field conditions. It is shown that the lidar can measure concentrations of chlorophyll a and dissolved organic matter at the surface of water bodies, detect fluorescence spectra of ground vegetation at a distance of up to 530 m, and determine the vertical profile of light-scattering particle concentration in the upper ocean. The possibilities of the lidar system are demonstrated by detection of polluted areas at the ocean surface, by online monitoring of three-dimensional distribution of light-scattering layers, and by recognition of plant types and physiological states

  10. Evaluation of Oceanic Surface Observation for Reproducing the Upper Ocean Structure in ECHAM5/MPI-OM

    Science.gov (United States)

    Luo, Hao; Zheng, Fei; Zhu, Jiang

    2017-12-01

    Better constraints of initial conditions from data assimilation are necessary for climate simulations and predictions, and they are particularly important for the ocean due to its long climate memory; as such, ocean data assimilation (ODA) is regarded as an effective tool for seasonal to decadal predictions. In this work, an ODA system is established for a coupled climate model (ECHAM5/MPI-OM), which can assimilate all available oceanic observations using an ensemble optimal interpolation approach. To validate and isolate the performance of different surface observations in reproducing air-sea climate variations in the model, a set of observing system simulation experiments (OSSEs) was performed over 150 model years. Generally, assimilating sea surface temperature, sea surface salinity, and sea surface height (SSH) can reasonably reproduce the climate variability and vertical structure of the upper ocean, and assimilating SSH achieves the best results compared to the true states. For the El Niño-Southern Oscillation (ENSO), assimilating different surface observations captures true aspects of ENSO well, but assimilating SSH can further enhance the accuracy of ENSO-related feedback processes in the coupled model, leading to a more reasonable ENSO evolution and air-sea interaction over the tropical Pacific. For ocean heat content, there are still limitations in reproducing the long time-scale variability in the North Atlantic, even if SSH has been taken into consideration. These results demonstrate the effectiveness of assimilating surface observations in capturing the interannual signal and, to some extent, the decadal signal but still highlight the necessity of assimilating profile data to reproduce specific decadal variability.

  11. The mechanism of upper-oceanic vertical motions forced by a moving typhoon

    International Nuclear Information System (INIS)

    Suzuki, Shin-ichi; Niino, Hiroshi; Kimura, Ryuji

    2011-01-01

    The upper-oceanic response to a moving typhoon, and the mechanism of the response, are studied based on linear theory and a numerical experiment. The results of the analysis by linear theory are summarized as follows. Three different processes (Ekman pumping, inertial pumping and 'anti-Ekman' pumping) contribute to the upper-oceanic vertical motions caused by a moving atmospheric disturbance. The dominant process depends on the Coriolis parameter f, the moving speed U of the disturbance and the along-track wavenumber spectrum of the wind stress curl. In the case of a typhoon, when the wavenumber spectrum has a dominant amplitude at k< f/U, Ekman pumping is the dominant mechanism and upwelling occurs at the typhoon center, where k is the along-track wavenumber. When the wavenumber spectrum has a significant amplitude near k∼f/U, inertial pumping is dominant and upwelling occurs to the rear of the typhoon center. The results of the numerical experiments show that linear theory performs well in explaining the horizontal structures of the upper-oceanic vertical motions and their dependence on the moving speed of the typhoon.

  12. Numerical simulation of small-scale mixing processes in the upper ocean and atmospheric boundary layer

    International Nuclear Information System (INIS)

    Druzhinin, O; Troitskaya, Yu; Zilitinkevich, S

    2016-01-01

    The processes of turbulent mixing and momentum and heat exchange occur in the upper ocean at depths up to several dozens of meters and in the atmospheric boundary layer within interval of millimeters to dozens of meters and can not be resolved by known large- scale climate models. Thus small-scale processes need to be parameterized with respect to large scale fields. This parameterization involves the so-called bulk coefficients which relate turbulent fluxes with large-scale fields gradients. The bulk coefficients are dependent on the properties of the small-scale mixing processes which are affected by the upper-ocean stratification and characteristics of surface and internal waves. These dependencies are not well understood at present and need to be clarified. We employ Direct Numerical Simulation (DNS) as a research tool which resolves all relevant flow scales and does not require closure assumptions typical of Large-Eddy and Reynolds Averaged Navier-Stokes simulations (LES and RANS). Thus DNS provides a solid ground for correct parameterization of small-scale mixing processes and also can be used for improving LES and RANS closure models. In particular, we discuss the problems of the interaction between small-scale turbulence and internal gravity waves propagating in the pycnocline in the upper ocean as well as the impact of surface waves on the properties of atmospheric boundary layer over wavy water surface. (paper)

  13. Hydrographic changes in the Lincoln Sea in the Arctic Ocean with focus on an upper ocean freshwater anomaly between 2007 and 2010

    NARCIS (Netherlands)

    de Steur, L.; Steele, M.; Hansen, E.; Morison, J.; Polyakov, I.; Olsen, S.M.; Melling, H.; McLaughlin, F.A.; Kwok, R.; Smethie Jr., W.M.; Schlosser, P.

    2013-01-01

    Hydrographic data from the Arctic Ocean show that freshwater content in the Lincoln Sea, north of Greenland, increased significantly from 2007 to 2010, slightly lagging changes in the eastern and central Arctic. The anomaly was primarily caused by a decrease in the upper ocean salinity. In 2011

  14. Multi-Decadal Oscillations of the Ocean Active Upper-Layer Heat Content

    Science.gov (United States)

    Byshev, Vladimir I.; Neiman, Victor G.; Anisimov, Mikhail V.; Gusev, Anatoly V.; Serykh, Ilya V.; Sidorova, Alexandra N.; Figurkin, Alexander L.; Anisimov, Ivan M.

    2017-07-01

    Spatial patterns in multi-decadal variability in upper ocean heat content for the last 60 years are examined using a numerical model developed at the Institute of Numerical Mathematics of Russia (INM Model) and sea water temperature-salinity data from the World Ocean Database (in: Levitus, NOAA Atlas NESDIS 66, U.S. Wash.: Gov. Printing Office, 2009). Both the model and the observational data show that the heat content of the Active Upper Layer (AUL) in particular regions of the Atlantic, Pacific and Southern oceans have experienced prominent simultaneous variations on multi-decadal (25-35 years) time scales. These variations are compared earlier revealed climatic alternations in the Northern Atlantic region during the last century (Byshev et al. in Doklady Earth Sci 438(2):887-892, 2011). We found that from the middle of 1970s to the end of 1990s the AUL heat content decreased in several oceanic regions, while the mean surface temperature increased on Northern Hemisphere continents according to IPCC (in: Stocker et al. Contribution of working group I to the fifth assessment report of the intergovernmental panel on climate change, Cambridge University Press, Cambridge, 2013). This means that the climate-forcing effect of the ocean-atmosphere interaction in certain energy-active areas determines not only local climatic processes, but also have an influence on global-scale climate phenomena. Here we show that specific regional features of the AUL thermal structure are in a good agreement with climatic conditions on the adjacent continents. Further, the ocean AUL in the five distinctive regions identified in our study have resumed warming in the first decade of this century. By analogy inference from previous climate scenarios, this may signal the onset of more continental climate over mainlands.

  15. The molecular biology capstone assessment: a concept assessment for upper-division molecular biology students.

    Science.gov (United States)

    Couch, Brian A; Wood, William B; Knight, Jennifer K

    2015-03-02

    Measuring students' conceptual understandings has become increasingly important to biology faculty members involved in evaluating and improving departmental programs. We developed the Molecular Biology Capstone Assessment (MBCA) to gauge comprehension of fundamental concepts in molecular and cell biology and the ability to apply these concepts in novel scenarios. Targeted at graduating students, the MBCA consists of 18 multiple-true/false (T/F) questions. Each question consists of a narrative stem followed by four T/F statements, which allows a more detailed assessment of student understanding than the traditional multiple-choice format. Questions were iteratively developed with extensive faculty and student feedback, including validation through faculty reviews and response validation through student interviews. The final assessment was taken online by 504 students in upper-division courses at seven institutions. Data from this administration indicate that the MBCA has acceptable levels of internal reliability (α=0.80) and test-retest stability (r=0.93). Students achieved a wide range of scores with a 67% overall average. Performance results suggest that students have an incomplete understanding of many molecular biology concepts and continue to hold incorrect conceptions previously documented among introductory-level students. By pinpointing areas of conceptual difficulty, the MBCA can provide faculty members with guidance for improving undergraduate biology programs. © 2015 B. A. Couch et al. CBE—Life Sciences Education © 2015 The American Society for Cell Biology. This article is distributed by The American Society for Cell Biology under license from the author(s). It is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License (http://creativecommons.org/licenses/by-nc-sa/3.0).

  16. Student Perceived and Determined Knowledge of Biology Concepts in an Upper-Level Biology Course

    Science.gov (United States)

    Montplaisir, Lisa

    2014-01-01

    Students who lack metacognitive skills can struggle with the learning process. To be effective learners, students should recognize what they know and what they do not know. This study examines the relationship between students’ perception of their knowledge and determined knowledge in an upper-level biology course utilizing a pre/posttest approach. Significant differences in students’ perception of their knowledge and their determined knowledge exist at the beginning (pretest) and end (posttest) of the course. Alignment between student perception and determined knowledge was significantly more accurate on the posttest compared with the pretest. Students whose determined knowledge was in the upper quartile had significantly better alignment between their perception and determined knowledge on the pre- and posttest than students in the lower quartile. No difference exists between how students perceived their knowledge between upper- and lower-quartile students. There was a significant difference in alignment of perception and determined knowledge between males and females on the posttest, with females being more accurate in their perception of knowledge. This study provides evidence of discrepancies that exist between what students perceive they know and what they actually know. PMID:26086662

  17. Global assessment of benthic nepheloid layers and linkage with upper ocean dynamics

    Science.gov (United States)

    Gardner, Wilford D.; Richardson, Mary Jo; Mishonov, Alexey V.

    2018-01-01

    Global maps of the maximum bottom concentration, thickness, and integrated particle mass in benthic nepheloid layers are published here to support collaborations to understand deep ocean sediment dynamics, linkage with upper ocean dynamics, and assessing the potential for scavenging of adsorption-prone elements near the deep ocean seafloor. Mapping the intensity of benthic particle concentrations from natural oceanic processes also provides a baseline that will aid in quantifying the industrial impact of current and future deep-sea mining. Benthic nepheloid layers have been mapped using 6,392 full-depth profiles made during 64 cruises using our transmissometers mounted on CTDs in multiple national/international programs including WOCE, SAVE, JGOFS, CLIVAR-Repeat Hydrography, and GO-SHIP during the last four decades. Intense benthic nepheloid layers are found in areas where eddy kinetic energy in overlying waters, mean kinetic energy 50 m above bottom (mab), and energy dissipation in the bottom boundary layer are near the highest values in the ocean. Areas of intense benthic nepheloid layers include the Western North Atlantic, Argentine Basin in the South Atlantic, parts of the Southern Ocean and areas around South Africa. Benthic nepheloid layers are weak or absent in most of the Pacific, Indian, and Atlantic basins away from continental margins. High surface eddy kinetic energy is associated with the Kuroshio Current east of Japan. Data south of the Kuroshio show weak nepheloid layers, but no transmissometer data exist beneath the Kuroshio, a deficiency that should be remedied to increase understanding of eddy dynamics in un-sampled and under-sampled oceanic areas.

  18. Seasonal variations in the aragonite saturation state in the upper open-ocean waters of the North Pacific Ocean

    Science.gov (United States)

    Kim, Tae-Wook; Park, Geun-Ha; Kim, Dongseon; Lee, Kitack; Feely, Richard A.; Millero, Frank J.

    2015-06-01

    Seasonal variability of the aragonite saturation state (ΩAR) in the upper (50 m and 100 m depths) North Pacific Ocean (NPO) was investigated using multiple linear regression (MLR). The MLR algorithm derived from a high-quality carbon data set accurately predicted the ΩAR of evaluation data sets (three time series stations and P02 section) with acceptable uncertainty (<0.1 ΩAR). The algorithm was combined with seasonal climatology data, and the estimated ΩAR varied in the range of 0.4-0.6 in the midlatitude western NPO, with the largest variation found for the tropical eastern NPO. These marked variations were largely controlled by seasonal changes in vertical mixing and thermocline depth, both of which determine the degree of entrainment of CO2-rich corrosive waters from deeper depths. Our MLR-based subsurface ΩAR climatology is complementary to surface climatology based on pCO2 measurements.

  19. Observations of the upper ocean response to storm forcing in the South Atlantic Roaring Forties

    Directory of Open Access Journals (Sweden)

    R. Marsh

    1995-10-01

    Full Text Available In the austral summer of 1992–1993 the passage of a storm system drove a strong upper ocean response at 45°S in the mid-South Atlantic. Good in situ observations were obtained. CTD casts revealed that the mixed layer deepened by ~40 m over 4 days. Wind stirring dominated over buoyancy flux-driven mixing during the onset of high winds. Doppler shear currents further reveal this to be intimately related to inertial dynamics. The penetration depth of inertial currents, which are confined to the mixed layer, increases with time after a wind event, matched by a downward propagation of low values of the Richardson number. This suggests that inertial current shear is instrumental in producing turbulence at the base of the mixed layer. Evolution of inertial transport is simulated using a time series of ship-observed wind stress. Simulated transport is only 30–50% of the observed transport, suggesting that much of the observed inertial motion was forced by an earlier (possibly remote storm. Close proximity of the subtropical front further complicates the upper ocean response to the storm. A simple heat balance for the upper 100 m reveals that surface cooling and mixing (during the storm can account for only a small fraction of an apparent ~1 °C mixed layer cooling.

  20. The electrical conductivity of the upper mantle and lithosphere from the magnetic signal due to ocean tidal flow

    DEFF Research Database (Denmark)

    Schnepf, Neesha Regmi; Kuvshinov, Alexey; Grayver, Alexander

    galvanically with Earth’s lithosphere (i.e. by direct coupling of the source currents in the ocean with the underlying substrate), enabling conductivity estimations at shallower depths. Here we present the results of determining a 1-D conductivity-depth profile of oceanic lithosphere and upper mantle using...

  1. Autonomous Observations of the Upper Ocean Stratification and Velocity Field about the Seasonality Retreating Marginal Ice Zone

    Science.gov (United States)

    2016-12-30

    fluxes of heat, salt, and momentum. Hourly GPS fixes tracked the motion of the supporting ice floes and T/C recorders sampled the ocean waters just... sampled in a range of ice conditions from full ice cover to nearly open water and observed a variety of stratification and ocean velocity signals (e.g...From - To) 12/30/2016 final 01-Nov-2011to 30-Sep-201 6 4. TITLE AND SUBTITLE Sa. CONTRACT NUMBER Autonomous observations of the upper ocean

  2. Upper-mantle water stratification inferred from observations of the 2012 Indian Ocean earthquake.

    Science.gov (United States)

    Masuti, Sagar; Barbot, Sylvain D; Karato, Shun-Ichiro; Feng, Lujia; Banerjee, Paramesh

    2016-10-20

    Water, the most abundant volatile in Earth's interior, preserves the young surface of our planet by catalysing mantle convection, lubricating plate tectonics and feeding arc volcanism. Since planetary accretion, water has been exchanged between the hydrosphere and the geosphere, but its depth distribution in the mantle remains elusive. Water drastically reduces the strength of olivine and this effect can be exploited to estimate the water content of olivine from the mechanical response of the asthenosphere to stress perturbations such as the ones following large earthquakes. Here, we exploit the sensitivity to water of the strength of olivine, the weakest and most abundant mineral in the upper mantle, and observations of the exceptionally large (moment magnitude 8.6) 2012 Indian Ocean earthquake to constrain the stratification of water content in the upper mantle. Taking into account a wide range of temperature conditions and the transient creep of olivine, we explain the transient deformation in the aftermath of the earthquake that was recorded by continuous geodetic stations along Sumatra as the result of water- and stress-activated creep of olivine. This implies a minimum water content of about 0.01 per cent by weight-or 1,600 H atoms per million Si atoms-in the asthenosphere (the part of the upper mantle below the lithosphere). The earthquake ruptured conjugate faults down to great depths, compatible with dry olivine in the oceanic lithosphere. We attribute the steep rheological contrast to dehydration across the lithosphere-asthenosphere boundary, presumably by buoyant melt migration to form the oceanic crust.

  3. Relationship between diversity and the vertical structure of the upper ocean

    Science.gov (United States)

    Longhurst, Alan R.

    1985-12-01

    The sources of diversity in the plankton ecosystem of the upper 250 m in the eastern tropical Pacific Ocean are explored in the data from LHPR plankton profiles. Though there is good evidence for resource partitioning among feeding guilds of congeners, and for specialization in predation—both known to create diversity in simple aquatic ecosystems—the existence of a stable vertical structure, including a thermocline, may be one of the more important causes of variation in regional plankton diversity in the euphotic zone.

  4. EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification

    NARCIS (Netherlands)

    Nisumaa, A.-M.; Pesant, S.; Bellerby, R.G.J.; Delille, B.; Middelburg, J.J.; Orr, J.C.; Riebesell, U.; Tyrrell, T.; Wolf-Gladrow, D.; Gattuso, J.P.

    2010-01-01

    The uptake of anthropogenic CO2 by the oceans has led to a rise in the oceanic partial pressure of CO2, and to a decrease in pH and carbonate ion concentration. This modification of the marine carbonate system is referred to as ocean acidification. Numerous papers report the effects of ocean

  5. Seismic and Biological Sources of Ambient Ocean Sound

    Science.gov (United States)

    Freeman, Simon Eric

    Sound is the most efficient radiation in the ocean. Sounds of seismic and biological origin contain information regarding the underlying processes that created them. A single hydrophone records summary time-frequency information from the volume within acoustic range. Beamforming using a hydrophone array additionally produces azimuthal estimates of sound sources. A two-dimensional array and acoustic focusing produce an unambiguous two-dimensional `image' of sources. This dissertation describes the application of these techniques in three cases. The first utilizes hydrophone arrays to investigate T-phases (water-borne seismic waves) in the Philippine Sea. Ninety T-phases were recorded over a 12-day period, implying a greater number of seismic events occur than are detected by terrestrial seismic monitoring in the region. Observation of an azimuthally migrating T-phase suggests that reverberation of such sounds from bathymetric features can occur over megameter scales. In the second case, single hydrophone recordings from coral reefs in the Line Islands archipelago reveal that local ambient reef sound is spectrally similar to sounds produced by small, hard-shelled benthic invertebrates in captivity. Time-lapse photography of the reef reveals an increase in benthic invertebrate activity at sundown, consistent with an increase in sound level. The dominant acoustic phenomenon on these reefs may thus originate from the interaction between a large number of small invertebrates and the substrate. Such sounds could be used to take census of hard-shelled benthic invertebrates that are otherwise extremely difficult to survey. A two-dimensional `map' of sound production over a coral reef in the Hawaiian Islands was obtained using two-dimensional hydrophone array in the third case. Heterogeneously distributed bio-acoustic sources were generally co-located with rocky reef areas. Acoustically dominant snapping shrimp were largely restricted to one location within the area surveyed

  6. Upper Arctic Ocean water masses harbor distinct communities of heterotrophic flagellates

    Directory of Open Access Journals (Sweden)

    A. Monier

    2013-06-01

    Full Text Available The ubiquity of heterotrophic flagellates (HFL in marine waters has been recognized for several decades, but the phylogenetic diversity of these small (ca. 0.8–20 μm cell diameter, mostly phagotrophic protists in the upper pelagic zone of the ocean is underappreciated. Community composition of microbes, including HFL, is the result of past and current environmental selection, and different taxa may be indicative of food webs that cycle carbon and energy very differently. While all oceanic water columns can be density stratified due to the temperature and salinity characteristics of different water masses, the Arctic Ocean is particularly well stratified, with nutrients often limiting in surface waters and most photosynthetic biomass confined to a subsurface chlorophyll maximum layer, where light and nutrients are both available. This physically well-characterized system provided an opportunity to explore the community diversity of HFL from different water masses within the water column. We used high-throughput DNA sequencing techniques as a rapid means of surveying the diversity of HFL communities in the southern Beaufort Sea (Canada, targeting the surface, the subsurface chlorophyll maximum layer (SCM and just below the SCM. In addition to identifying major clades and their distribution, we explored the micro-diversity within the globally significant but uncultivated clade of marine stramenopiles (MAST-1 to examine the possibility of niche differentiation within the stratified water column. Our results strongly suggested that HFL community composition was determined by water mass rather than geographical location across the Beaufort Sea. Future work should focus on the biogeochemical and ecological repercussions of different HFL communities in the face of climate-driven changes to the physical structure of the Arctic Ocean.

  7. Upper-Ocean Heat Balance Processes and the Walker Circulation in CMIP5 Model Projections

    Science.gov (United States)

    Robertson, F. R.; Roberts, J. B.; Funk, C.; Lyon, B.; Ricciardulli, L.

    2012-01-01

    Considerable uncertainty remains as to the importance of mechanisms governing decadal and longer variability of the Walker Circulation, its connection to the tropical climate system, and prospects for tropical climate change in the face of anthropogenic forcing. Most contemporary climate models suggest that in response to elevated CO2 and a warmer but more stratified atmosphere, the required upward mass flux in tropical convection will diminish along with the Walker component of the tropical mean circulation as well. Alternatively, there is also evidence to suggest that the shoaling and increased vertical stratification of the thermocline in the eastern Pacific will enable a muted SST increase there-- preserving or even enhancing some of the dynamical forcing for the Walker cell flow. Over the past decade there have been observational indications of an acceleration in near-surface easterlies, a strengthened Pacific zonal SST gradient, and globally-teleconnected dislocations in precipitation. But is this evidence in support of an ocean dynamical thermostat process posited to accompany anthropogenic forcing, or just residual decadal fluctuations associated with variations in warm and cold ENSO events and other stochastic forcing? From a modeling perspective we try to make headway on this question by examining zonal variations in surface energy fluxes and dynamics governing tropical upper ocean heat content evolution in the WCRP CMIP5 model projections. There is some diversity among model simulations; for example, the CCSM4 indicates net ocean warming over the IndoPacific region while the CSIRO model concentrates separate warming responses over the central Pacific and Indian Ocean regions. The models, as with observations, demonstrate strong local coupling between variations in column water vapor, downward surface longwave radiation and SST; but the spatial patterns of changes in the sign of this relationship differ among models and, for models as a whole, with

  8. Seasonal variations of the upper ocean salinity stratification in the Tropics

    Science.gov (United States)

    Maes, Christophe; O'Kane, Terence J.

    2014-03-01

    In comparison to the deep ocean, the upper mixed layer is a region typically characterized by substantial vertical gradients in water properties. Within the Tropics, the rich variability in the vertical shapes and forms that these structures can assume through variation in the atmospheric forcing results in a differential effect in terms of the temperature and salinity stratification. Rather than focusing on the strong halocline above the thermocline, commonly referred to as the salinity barrier layer, the present study takes into account the respective thermal and saline dependencies in the Brunt-Väisälä frequency (N2) in order to isolate the specific role of the salinity stratification in the layers above the main pycnocline. We examine daily vertical profiles of temperature and salinity from an ocean reanalysis over the period 2001-2007. We find significant seasonal variations in the Brunt-Väisälä frequency profiles are limited to the upper 300 m depth. Based on this, we determine the ocean salinity stratification (OSS) to be defined as the stabilizing effect (positive values) due to the haline part of N2 averaged over the upper 300 m. In many regions of the tropics, the OSS contributes 40-50% to N2 as compared to the thermal stratification and, in some specific regions, exceeds it for a few months of the seasonal cycle. Away from the tropics, for example, near the centers of action of the subtropical gyres, there are regions characterized by the permanent absence of OSS. In other regions previously characterized with salinity barrier layers, the OSS obviously shares some common variations; however, we show that where temperature and salinity are mixed over the same depth, the salinity stratification can be significant. In addition, relationships between the OSS and the sea surface salinity are shown to be well defined and quasilinear in the tropics, providing some indication that in the future, analyses that consider both satellite surface salinity

  9. EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification

    OpenAIRE

    Nisumaa Anne-Marin; Pesant Stephane; Bellerby Richard G J; Delille Bruno; Middelburg Jack J; Orr James C; Riebesell Ulf; Tyrrell Toby; Wolf-Gladrow Dieter A; Gattuso Jean-Pierre

    2010-01-01

    The uptake of anthropogenic CO2 by the oceans has led to a rise in the oceanic partial pressure of CO2, and to a decrease in pH and carbonate ion concentration. This modification of the marine carbonate system is referred to as ocean acidification. Numerous papers report the effects of ocean acidification on marine organisms and communities but few have provided details concerning full carbonate chemistry and complementary observations. Additional...

  10. Controls on thallium uptake during hydrothermal alteration of the upper ocean crust

    Science.gov (United States)

    Coggon, Rosalind M.; Rehkämper, Mark; Atteck, Charlotte; Teagle, Damon A. H.; Alt, Jeffrey C.; Cooper, Matthew J.

    2014-11-01

    Hydrothermal circulation is a fundamental component of global biogeochemical cycles. However, the magnitude of the high temperature axial hydrothermal fluid flux remains disputed, and the lower temperature ridge flank fluid flux is difficult to quantify. Thallium (Tl) isotopes behave differently in axial compared to ridge flank systems, with Tl near-quantitatively stripped from the intrusive crust by high temperature hydrothermal reactions, but added to the lavas during low temperature reaction with seawater. This contrasting behavior provides a unique approach to determine the fluid fluxes associated with axial and ridge flank environments. Unfortunately, our understanding of the Tl isotopic mass balance is hindered by poor knowledge of the mineralogical, physical and chemical controls on Tl-uptake by the ocean crust. Here we use analyses of basaltic volcanic upper crust from Integrated Ocean Drilling Program Hole U1301B on the Juan de Fuca Ridge flank, combined with published analyses of dredged seafloor basalts and upper crustal basalts from Holes 504B and 896A, to investigate the controls on Tl-uptake by mid-ocean ridge basalts and evaluate when in the evolution of the ridge flank hydrothermal system Tl-uptake occurs. Seafloor basalts indicate an association between basaltic uptake of Tl from cold seawater and uptake of Cs and Rb, which are known to partition into K-rich phases. Although there is no clear relationship between Tl and K contents of seafloor basalts, the data do not rule out the incorporation of at least some Tl into the same minerals as the alkali elements. In contrast, we find no relationship between the Tl content and either the abundance of secondary phyllosilicate minerals, or the K, Cs or Rb contents in upper crustal basalts. We conclude that the uptake of Tl and alkali elements during hydrothermal alteration of the upper crust involves different processes and/or mineral phases compared to those that govern seafloor weathering. Furthermore

  11. Evidence for Late Permian-Upper Triassic ocean acidification from calcium isotopes in carbonate of the Kamura section in Japan

    Science.gov (United States)

    Ye, F.; Zhao, L., Sr.; Chen, Z. Q.; Wang, X.

    2017-12-01

    Calcium and carbon cycles are tightly related in the ocean, for example, through continental weathering and deposition of carbonate, thus, very important for exploring evolutions of marine environment during the earth history. The end-Permian mass extinction is the biggest biological disaster in the Phanerozoic and there are several studies talking about variations of calcium isotopes across the Permian-Triassic boundary (PTB). However, these studies are all from the Tethys regions (Payne et al., 2010; Hinojosa et al., 2012), while the Panthalassic Ocean is still unknown to people. Moreover, evolutions of the calcium isotopes during the Early to Late Triassic is also poorly studied (Blattler et al., 2012). Here, we studied an Uppermost Permian to Upper Triassic shallow water successions (Kamura section, Southwest Japan) in the Central Panthalassic Ocean. The Kamura section is far away from the continent without any clastic pollution, therefore, could preserved reliable δ44/40Cacarb signals. Conodont zonation and carbonate carbon isotope also provide precious time framework which is necessary for the explaining of the δ44/40Cacarb profile. In Kamura, δ44/40Cacarb and δ13Ccarb both exhibit negative excursions across the PTB, the δ44/40Cacarb value in the end-Permian is 1.0398‰ then abrupt decrease to the minimum value of 0.1524‰. CO2-driven global ocean acidification best explains the coincidence of the δ44/40Cacarb excursion with negative excursions in the δ13Ccarb of carbonates until the Early Smithian(N1a, N1b, N1c, P1, N2, P2). In the Middle and the Late Triassic, the δ44/40 Cacarb average approximately 1.1‰. During the Middle and Late Triassic, strong relationships between δ44/40Cacarb and δ13Ccarb are collapsed, indicating a normal pH values of the seawater in those time. The Siberian Trap volcanism probably played a significant role on the δ44/40Cacarb until the late Early Triassic. After that, δ44/40Cacarb was mostly controlled by carbonate

  12. Geoengineering impact of open ocean dissolution of olivine on atmospheric CO2, surface ocean pH and marine biology

    International Nuclear Information System (INIS)

    Köhler, Peter; Abrams, Jesse F; Völker, Christoph; Hauck, Judith; Wolf-Gladrow, Dieter A

    2013-01-01

    Ongoing global warming induced by anthropogenic emissions has opened the debate as to whether geoengineering is a ‘quick fix’ option. Here we analyse the intended and unintended effects of one specific geoengineering approach, which is enhanced weathering via the open ocean dissolution of the silicate-containing mineral olivine. This approach would not only reduce atmospheric CO 2 and oppose surface ocean acidification, but would also impact on marine biology. If dissolved in the surface ocean, olivine sequesters 0.28 g carbon per g of olivine dissolved, similar to land-based enhanced weathering. Silicic acid input, a byproduct of the olivine dissolution, alters marine biology because silicate is in certain areas the limiting nutrient for diatoms. As a consequence, our model predicts a shift in phytoplankton species composition towards diatoms, altering the biological carbon pumps. Enhanced olivine dissolution, both on land and in the ocean, therefore needs to be considered as ocean fertilization. From dissolution kinetics we calculate that only olivine particles with a grain size of the order of 1 μm sink slowly enough to enable a nearly complete dissolution. The energy consumption for grinding to this small size might reduce the carbon sequestration efficiency by ∼30%. (letter)

  13. Surface signature of Mediterranean water eddies in the Northeastern Atlantic: effect of the upper ocean stratification

    Directory of Open Access Journals (Sweden)

    I. Bashmachnikov

    2012-11-01

    Full Text Available Meddies, intra-thermocline eddies of Mediterranean water, can often be detected at the sea surface as positive sea-level anomalies. Here we study the surface signature of several meddies tracked with RAFOS floats and AVISO altimetry.

    While pushing its way through the water column, a meddy raises isopycnals above. As a consequence of potential vorticity conservation, negative relative vorticity is generated in the upper layer. During the initial period of meddy acceleration after meddy formation or after a stagnation stage, a cyclonic signal is also generated at the sea-surface, but mostly the anticyclonic surface signal follows the meddy.

    Based on geostrophy and potential vorticity balance, we present theoretical estimates of the intensity of the surface signature. It appears to be proportional to the meddy core radius and to the Coriolis parameter, and inversely proportional to the core depth and buoyancy frequency. This indicates that surface signature of a meddy may be strongly reduced by the upper ocean stratification. Using climatic distribution of the stratification intensity, we claim that the southernmost limit for detection in altimetry of small meddies (with radii on the order of 10–15 km should lie in the subtropics (35–45° N, while large meddies (with radii of 25–30 km could be detected as far south as the northern tropics (25–35° N. Those results agree with observations.

  14. Autonomous Observations of the Upper Ocean Stratification and Velocity Field about the Seasonally-Retreating Marginal Ice Zone

    Science.gov (United States)

    2016-12-30

    wavelength shifted towards smaller scales as ice concentration changed from greater than 95% to 70-95%. This work was reported at the 2016 Ocean ...71 ITP- 78 ITP-79 ITP-SO c. 2 - 1 -2 Figure 3. Time series of the wind stress work ( blue and black) and the ocean stress work (red) on one of...From - To) 12/30/2016 final 01-Nov-2011 to 30-Sep-2016 4. TITLE AND SUBTITLE Sa. CONTRACT NUMBER Autonomous observations of the upper ocean

  15. Wind energy input into the upper ocean over a lengthening open water season

    Science.gov (United States)

    Mahoney, A. R.; Rolph, R.; Walsh, J. E.

    2017-12-01

    Wind energy input into the ocean has important consequences for upper ocean mixing, heat and gas exchange, and air-sea momentum transfer. In the Arctic, the open water season is increasing and extending further into the fall storm season, allowing for more wind energy input into the water column. The rate at which the delayed freeze-up timing extends into fall storm season is an important metric to evaluate because the expanding overlap between the open water period and storm season could contribute a significant amount of wind energy into the water column in a relatively short period of time. We have shown that time-integrated wind speeds over open water in the Chukchi Sea and southern Beaufort region have increased since 1979 through 2014. An integrated wind energy input value is calculated for each year in this domain over the open water season, as well as for periods over partial concentrations of ice cover. Spatial variation of this integrated wind energy is shown along the Alaskan coastline, which can have implications for different rates of coastal erosion. Spatial correlation between average wind speed over open water and open water season length from 1979-2014 show positive values in the southern Beaufort, but negative values in the northern Chukchi. This suggests possible differences in the role of the ocean on open water season length depending on region. We speculate that the warm Pacific water outflow plays a more dominant role in extending the open water season length in the northern Chukchi when compared to the southern Beaufort, and might help explain why we can show there is a relatively longer open water season length there. The negative and positive correlations in wind speeds over open water and open water season length might also be explained by oceanic changes tending to operate on longer timescales than the atmosphere. Seasonal timescales of wind events such as regional differences in overlap of the extended open water season due to regional

  16. Radioactivity in the ocean: laws and biological effects

    Energy Technology Data Exchange (ETDEWEB)

    Hunsaker, C.T.

    1985-01-01

    This paper summarizes the literature on US laws and international agreements, experimental and monitoring data, and ongoing studies to provide background information for environmental assessment and regulatory compliance activities for ocean dumping of low-level radioactive waste. The Marine Protection, Research, and Sanctuaries Act is the major US legislation governing ocean disposal of radioactive waste. The major international agreement on ocean dumping is the Convention on the Prevention of Marine Pollution by Dumping of Wastes and other Matter. The United States ended its ocean dumping of radioactive wastes in 1970, but other countries have continued ocean dumping under international supervision in the northeast Atlantic. Monitoring of former US disposal sites has neither revealed significant effects on marine biota nor indicated a hazard to human health. Also, no effects on marine organisms have been found that could be attributed to routine discharges into the Irish Sea from the Windscale reprocessing plant. We must improve our ability to predict the oceanic carrying capacity and the fate and effects of ionizing radiation in the marine environment.

  17. Radioactivity in the ocean: laws and biological effects

    International Nuclear Information System (INIS)

    Hunsaker, C.T.

    1985-01-01

    This paper summarizes the literature on US laws and international agreements, experimental and monitoring data, and ongoing studies to provide background information for environmental assessment and regulatory compliance activities for ocean dumping of low-level radioactive waste. The Marine Protection, Research, and Sanctuaries Act is the major US legislation governing ocean disposal of radioactive waste. The major international agreement on ocean dumping is the Convention on the Prevention of Marine Pollution by Dumping of Wastes and other Matter. The United States ended its ocean dumping of radioactive wastes in 1970, but other countries have continued ocean dumping under international supervision in the northeast Atlantic. Monitoring of former US disposal sites has neither revealed significant effects on marine biota nor indicated a hazard to human health. Also, no effects on marine organisms have been found that could be attributed to routine discharges into the Irish Sea from the Windscale reprocessing plant. We must improve our ability to predict the oceanic carrying capacity and the fate and effects of ionizing radiation in the marine environment

  18. The Ocean Tracking Network and its contribution to ocean biological observation

    Science.gov (United States)

    Whoriskey, F. G.

    2016-02-01

    Animals move to meet their needs for food, shelter, reproduction and to avoid unfavorable environments. In aquatic systems, it is essential that we understand these movements if we are to sustainably manage populations and maintain healthy ecosystems. Thus the ability to document and monitor changes in aquatic animal movements is a biological observing system need. The Ocean Tracking Network (OTN) is a global research, technology development, and data management platform headquartered at Dalhousie University, in Halifax, Nova Scotia working to fill this need. OTN uses electronic telemetry to document the local-to-global movements and survival of aquatic animals, and to correlate them to oceanographic or limnological variables that are influencing movements. Such knowledge can assist with planning for and managing of anthropogenic impacts on present and future animal distributions, including those due to climate change. OTN works with various tracking methods including satellite and data storage tag systems, but its dominant focus is acoustic telemetry. OTN is built on global partnerships for the sharing of equipment and data, and has stimulated technological development in telemetry by bringing researchers with needs for new capabilities together with manufacturers to generate, test, and operationalize new technologies. This has included pioneering work into the use of marine autonomous vehicles (Slocum electric gliders; Liquid Robotics Wave Glider) in animal telemetry research. Similarly, OTN scientists worked with the Sea Mammal Research Unit to develop mobile acoustic receiver that have been placed on grey seals and linked via Bluetooth to a satellite transmitter/receiver. This provided receiver coverage in areas occupied by the seals during their typically extensive migrations and allowed for the examination of ecosystem linkages by documenting behavioral interactions the seals had with the physical environment, conspecifics, and other tagged species.

  19. Annual cycle of the upper-ocean circulation and properties in the ...

    African Journals Online (AJOL)

    ocean dynamics and its influence on ocean properties in the tropical western Indian Ocean. Surface winds and heat fluxes from the National Centers for Environmental Prediction (NCEP) reanalysis forced the model (Model_NCEP) with initial and ...

  20. Summer microbial community composition governed by upper-ocean stratification and nutrient availability in northern Marguerite Bay, Antarctica

    NARCIS (Netherlands)

    Rozema, Patrick D.; Biggs, Tristan; Sprong, Pim A.A.; Buma, Anita G.J.; Venables, Hugh J.; Evans, Claire; Meredith, Michael P.; Bolhuis, Henk

    The Western Antarctic Peninsula warmed significantly during the second half of the twentieth century, with a concurrent retreat of the majority of its glaciers, and marked changes in the sea-ice field. These changes may affect summertime upper-ocean stratification, and thereby the seasonal dynamics

  1. Summer microbial community composition governed by upper-ocean stratification and nutrient availability in northern Marguerite Bay, Antarctica

    NARCIS (Netherlands)

    Rozema, P.D.; Biggs, T.; Sprong, P.A.A.; Buma, A.G.J.; Venables, H.J.; Evans, C.; Meredith, M.P.; Bolhuis, H.

    2017-01-01

    The Western Antarctic Peninsula warmed significantly during the second half of the twentieth century, with a concurrent retreat of the majority of its glaciers, and marked changes in the sea-ice field. These changes may affect summertime upper-ocean stratification, and thereby the seasonal dynamics

  2. Spatial distribution of turbulent mixing in the upper ocean of the South China Sea

    Directory of Open Access Journals (Sweden)

    X.-D. Shang

    2017-06-01

    Full Text Available The spatial distribution of the dissipation rate (ε and diapycnal diffusivity (κ in the upper ocean of the South China Sea (SCS is presented from a measurement program conducted from 26 April to 23 May 2010. In the vertical distribution, the dissipation rates below the surface mixed layer were predominantly high in the thermocline where shear and stratification were strong. In the regional distribution, high dissipation rates and diapycnal diffusivities were observed in the region to the west of the Luzon Strait, with an average dissipation rate and diapycnal diffusivity of 8.3  ×  10−9 W kg−1 and 2.7  ×  10−5 m2 s−1, respectively, almost 1 order of magnitude higher than those in the central and southern SCS. In the region to the west of the Luzon Strait, the water column was characterized by strong shear and weak stratification. Elevated dissipation rates (ε > 10−7 W kg−1 and diapycnal diffusivities (κ > 10−4 m2 s−1, induced by shear instability, occurred in the water column. In the central and southern SCS, the water column was characterized by strong stratification and weak shear and the turbulent mixing was weak. Internal waves and internal tides generated near the Luzon Strait are expected to make a dominant contribution to the strong turbulent mixing and shear in the region to the west of the Luzon Strait. The observed dissipation rates were found to scale positively with the shear and stratification, which were consistent with the MacKinnon–Gregg model used for the continental shelf but different from the Gregg–Henyey scaling used for the open ocean.

  3. Spatial distribution of turbulent mixing in the upper ocean of the South China Sea

    Science.gov (United States)

    Shang, Xiao-Dong; Liang, Chang-Rong; Chen, Gui-Ying

    2017-06-01

    The spatial distribution of the dissipation rate (ɛ) and diapycnal diffusivity (κ) in the upper ocean of the South China Sea (SCS) is presented from a measurement program conducted from 26 April to 23 May 2010. In the vertical distribution, the dissipation rates below the surface mixed layer were predominantly high in the thermocline where shear and stratification were strong. In the regional distribution, high dissipation rates and diapycnal diffusivities were observed in the region to the west of the Luzon Strait, with an average dissipation rate and diapycnal diffusivity of 8.3 × 10-9 W kg-1 and 2.7 × 10-5 m2 s-1, respectively, almost 1 order of magnitude higher than those in the central and southern SCS. In the region to the west of the Luzon Strait, the water column was characterized by strong shear and weak stratification. Elevated dissipation rates (ɛ > 10-7 W kg-1) and diapycnal diffusivities (κ > 10-4 m2 s-1), induced by shear instability, occurred in the water column. In the central and southern SCS, the water column was characterized by strong stratification and weak shear and the turbulent mixing was weak. Internal waves and internal tides generated near the Luzon Strait are expected to make a dominant contribution to the strong turbulent mixing and shear in the region to the west of the Luzon Strait. The observed dissipation rates were found to scale positively with the shear and stratification, which were consistent with the MacKinnon-Gregg model used for the continental shelf but different from the Gregg-Henyey scaling used for the open ocean.

  4. Geophysical Investigations of Crustal and Upper Mantle Structure of Oceanic Intraplate Volcanoes (OIVs)

    Science.gov (United States)

    Robinson, A. H.; Peirce, C.; Funnell, M.; Watts, A. B.; Grevemeyer, I.

    2016-12-01

    Oceanic intraplate volcanoes (OIVs) represent a record of the modification of the oceanic crust by volcanism related to a range of processes including hot-spots, small scale mantle convection, and localised lithospheric extension. Geophysical studies of OIVs show a diversity in crustal and upper mantle structures, proposed to exist on a spectrum between two end-members where the main control is the age of the lithosphere at the time of volcanism. This hypothesis states that where the lithosphere is older, colder, and thicker it is more resistant to vertical magmatism than younger, hotter, thinner lithosphere. It is suggested that the Moho acts as a density filter, permitting relatively buoyant magma to vertically intrude the crust, but preventing denser magma from ascending to shallow levels. A key control may therefore be the melting depth, known to affect magma composition, and itself related to lithosphere age. Combined geophysical approaches allow us to develop robust models for OIV crustal structures with quantifiable resolution and uncertainty. As a case study, we present results from a multi-approach geophysical experiment at the Louisville Ridge Seamount Chain, believed to have formed on young (travel-time modelling of picked arrivals, is tested against reflection and gravity data. We compare our observations with studies of other OIVs to test whether lithospheric age controls OIV structure. Comparisons are limited by the temporal and spatial distribution of lithosphere and volcano ages, but suggest the hypothesis does not hold for all OIV features. While age may be the main control on OIV structure, as it determines lithosphere thermal and mechanical properties, other factors such as thermal rejuvenation, mechanical weakening, and volcano load size and distribution, may also come into play.

  5. The Molecular Biology Capstone Assessment: A Concept Assessment for Upper-Division Molecular Biology Students

    Science.gov (United States)

    Couch, Brian A.; Wood, William B.; Knight, Jennifer K.

    2015-01-01

    Measuring students' conceptual understandings has become increasingly important to biology faculty members involved in evaluating and improving departmental programs. We developed the Molecular Biology Capstone Assessment (MBCA) to gauge comprehension of fundamental concepts in molecular and cell biology and the ability to apply these concepts in…

  6. Multi-centennial upper-ocean heat content reconstruction using online data assimilation

    Science.gov (United States)

    Perkins, W. A.; Hakim, G. J.

    2017-12-01

    The Last Millennium Reanalysis (LMR) provides an advanced paleoclimate ensemble data assimilation framework for multi-variate climate field reconstructions over the Common Era. Although reconstructions in this framework with full Earth system models remain prohibitively expensive, recent work has shown improved ensemble reconstruction validation using computationally inexpensive linear inverse models (LIMs). Here we leverage these techniques in pursuit of a new multi-centennial field reconstruction of upper-ocean heat content (OHC), synthesizing model dynamics with observational constraints from proxy records. OHC is an important indicator of internal climate variability and responds to planetary energy imbalances. Therefore, a consistent extension of the OHC record in time will help inform aspects of low-frequency climate variability. We use the Community Climate System Model version 4 (CCSM4) and Max Planck Institute (MPI) last millennium simulations to derive the LIMs, and the PAGES2K v.2.0 proxy database to perform annually resolved reconstructions of upper-OHC, surface air temperature, and wind stress over the last 500 years. Annual OHC reconstructions and uncertainties for both the global mean and regional basins are compared against observational and reanalysis data. We then investigate differences in dynamical behavior at decadal and longer time scales between the reconstruction and simulations in the last-millennium Coupled Model Intercomparison Project version 5 (CMIP5). Preliminary investigation of 1-year forecast skill for an OHC-only LIM shows largely positive spatial grid point local anomaly correlations (LAC) with a global average LAC of 0.37. Compared to 1-year OHC persistence forecast LAC (global average LAC of 0.30), the LIM outperforms the persistence forecasts in the tropical Indo-Pacific region, the equatorial Atlantic, and in certain regions near the Antarctic Circumpolar Current. In other regions, the forecast correlations are less than the

  7. Observations of turbulent energy dissipation rate in the upper ocean of the central South China Sea

    Science.gov (United States)

    Chen, G.

    2016-02-01

    Measurements of turbulent energy dissipation rate, velocity, temperature, and salinity were obtained in the upper ocean of the central South China Sea (14.5˚N, 117.0˚E) during an experimental campaign from May 11th to 13th 2010. Dissipation rate was elevated ( 10-7 Wkg-1) at night by convection mixing and was weakened ( 10-9 Wkg-1) in daytime due to the warming stratification. Thermocline dissipation rate varied with time ( 10-9 Wkg-1 to 10-8 Wkg-1) under the influence of internal waves. Energy was transferred from the diurnal internal tides to high frequency internal waves through nonlinear wave-wave interactions. This energy cascade process was accompanied by elevated shear and enhanced dissipation, which played an important role in the turbulent mixing in thermocline. Compare with the thermocline dissipation, dissipation below the thermocline was more stable and weak ( 10-10 Wkg-1). The observed dissipation rate during the measurement was well parameterized by the MacKinnon-Gregg parameterization (a model based on a reinterpretation of wave-wave interaction theory), whereas the Gregg-Henyey parameterization was not in good agreement with the observed dissipation rate.

  8. Monte Carlo simulation of spectral reflectance and BRDF of the bubble layer in the upper ocean.

    Science.gov (United States)

    Ma, Lanxin; Wang, Fuqiang; Wang, Chengan; Wang, Chengchao; Tan, Jianyu

    2015-09-21

    The presence of bubbles can significantly change the radiative properties of seawater and these changes will affect remote sensing and underwater target detection. In this work, the spectral reflectance and bidirectional reflectance characteristics of the bubble layer in the upper ocean are investigated using the Monte Carlo method. The Hall-Novarini (HN) bubble population model, which considers the effect of wind speed and depth on the bubble size distribution, is used. The scattering coefficients and the scattering phase functions of bubbles in seawater are calculated using Mie theory, and the inherent optical properties of seawater for wavelengths between 300 nm and 800 nm are related to chlorophyll concentration (Chl). The effects of bubble coating, Chl, and bubble number density on the spectral reflectance of the bubble layer are studied. The bidirectional reflectance distribution function (BRDF) of the bubble layer for both normal and oblique incidence is also investigated. The results show that bubble populations in clear waters under high wind speed conditions significantly influence the reflection characteristics of the bubble layer. Furthermore, the contribution of bubble populations to the reflection characteristics is mainly due to the strong backscattering of bubbles that are coated with an organic film.

  9. Multiweek Cell Culture Project for Use in Upper-Level Biology Laboratories

    Science.gov (United States)

    Marion, Rebecca E.; Gardner, Grant E.; Parks, Lisa D.

    2012-01-01

    This article describes a laboratory protocol for a multiweek project piloted in a new upper-level biology laboratory (BIO 426) using cell culture techniques. Human embryonic kidney-293 cells were used, and several culture media and supplements were identified for students to design their own experiments. Treatments included amino acids, EGF,…

  10. AFSC/RACE/GAP/Conrath: Notes on the Reproductive Biology of Female Salmon Sharks in the Eastern North Pacific Ocean

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Little information has previously been published on the reproductive biology of the salmon shark in the Eastern North Pacific ocean. This data set incorporates basic...

  11. The acceleration of dissolved cobalt's ecological stoichiometry due to biological uptake, remineralization, and scavenging in the Atlantic Ocean

    Science.gov (United States)

    Saito, Mak A.; Noble, Abigail E.; Hawco, Nicholas; Twining, Benjamin S.; Ohnemus, Daniel C.; John, Seth G.; Lam, Phoebe; Conway, Tim M.; Johnson, Rod; Moran, Dawn; McIlvin, Matthew

    2017-10-01

    The stoichiometry of biological components and their influence on dissolved distributions have long been of interest in the study of the oceans. Cobalt has the smallest oceanic inventory of inorganic micronutrients and hence is particularly vulnerable to influence by internal oceanic processes including euphotic zone uptake, remineralization, and scavenging. Here we observe not only large variations in dCo : P stoichiometry but also the acceleration of those dCo : P ratios in the upper water column in response to several environmental processes. The ecological stoichiometry of total dissolved cobalt (dCo) was examined using data from a US North Atlantic GEOTRACES transect and from a zonal South Atlantic GEOTRACES-compliant transect (GA03/3e and GAc01) by Redfieldian analysis of its statistical relationships with the macronutrient phosphate. Trends in the dissolved cobalt to phosphate (dCo : P) stoichiometric relationships were evident in the basin-scale vertical structure of cobalt, with positive dCo : P slopes in the euphotic zone and negative slopes found in the ocean interior and in coastal environments. The euphotic positive slopes were often found to accelerate towards the surface and this was interpreted as being due to the combined influence of depleted phosphate, phosphorus-sparing (conserving) mechanisms, increased alkaline phosphatase metalloenzyme production (a zinc or perhaps cobalt enzyme), and biochemical substitution of Co for depleted Zn. Consistent with this, dissolved Zn (dZn) was found to be drawn down to only 2-fold more than dCo, despite being more than 18-fold more abundant in the ocean interior. Particulate cobalt concentrations increased in abundance from the base of the euphotic zone to become ˜ 10 % of the overall cobalt inventory in the upper euphotic zone with high stoichiometric values of ˜ 400 µmol Co mol-1 P. Metaproteomic results from the Bermuda Atlantic Time-series Study (BATS) station found cyanobacterial isoforms of the

  12. Interactive influences of bioactive trace metals on biological production in oceanic waters

    International Nuclear Information System (INIS)

    Bruland, K.W.; Donat, J.R.; Hutchins, D.A.

    1991-01-01

    The authors present an overview of the oceanic chemistries of the bioactive trace metals, Mn, Fe, Co, Ni, Cu, and Zn; the authors combine field data with results from laboratory phytoplankton culture-trace metal studies and speculate on the potential influences of these trace metals on oceanic plankton production and species composition. Most field studies have focused on the effects of single metals. However, they propose that synergistic and antagonistic interactions between multiple trace metals could be very important in the oceans. Trace metal antagonisms that may prove particularly important are those between Cu and the potential biolimiting metals Fe, Mn, and Zn. These antagonistic interactions could have the greatest influence on biological productivity in areas of the open ocean isolated from terrestrial inputs, such as the remote high nutrient regions of the Pacific and Antarctic Oceans. The emerging picture of trace metal-biota interactions in these oceanic areas is one in which biology strongly influences distribution and chemical speciation of all these bioactive trace metals. It also seems likely that many of these bioactive trace metals and their speciation may influence levels of primary productivity, species composition, and trophic structure. Future investigations should give more complete consideration to the interactive effects of biologically important trace metals

  13. VM-ADCP measured upper ocean currents in the southeastern Arabian Sea and Equatorial Indian Ocean during December, 2000

    Digital Repository Service at National Institute of Oceanography (India)

    Murty, V.S.N.; Suryanarayana, A.; Somayajulu, Y.K.; Raikar, V.; Tilvi, V.

    west wind forcing through December and retroflection of NEC. The transport of the NECC in the upper 100 m varies from 4x10@u6@@ m@u3@@ /s at 83 degrees E to 7x10@u6@@ m@u3@@ /s at 93 degrees E. The data details the structure of the South Equatorial...

  14. Seaglider surveys at Ocean Station Papa: Diagnosis of upper-ocean heat and salt balances using least squares with inequality constraints

    Science.gov (United States)

    Pelland, Noel A.; Eriksen, Charles C.; Cronin, Meghan F.

    2017-06-01

    Heat and salt balances in the upper 200 m are examined using data from Seaglider spatial surveys June 2008 to January 2010 surrounding a NOAA surface mooring at Ocean Station Papa (OSP; 50°N, 145°W). A least-squares approach is applied to repeat Seaglider survey and moored measurements to solve for unknown or uncertain monthly three-dimensional circulation and vertical diffusivity. Within the surface boundary layer, the estimated heat and salt balances are dominated throughout the surveys by turbulent flux, vertical advection, and for heat, radiative absorption. When vertically integrated balances are considered, an estimated upwelling of cool water balances the net surface input of heat, while the corresponding large import of salt across the halocline due to upwelling and diffusion is balanced by surface moisture input and horizontal import of fresh water. Measurement of horizontal gradients allows the estimation of unresolved vertical terms over more than one annual cycle; diffusivity in the upper-ocean transition layer decreases rapidly to the depth of the maximum near-surface stratification in all months, with weak seasonal modulation in the rate of decrease and profile amplitude. Vertical velocity is estimated to be on average upward but with important monthly variations. Results support and expand existing evidence concerning the importance of horizontal advection in the balances of heat and salt in the Gulf of Alaska, highlight time and depth variability in difficult-to-measure vertical transports in the upper ocean, and suggest avenues of further study in future observational work at OSP.

  15. IPCC workshop on impacts of ocean acidification on marine biology and ecosystems. Workshop report

    Energy Technology Data Exchange (ETDEWEB)

    Field, C.B.; Barros, V.; Stocker, T.F.; Dahe, Q.; Mach, K.J.; Plattner, G.-K.; Mastrandrea, M.D.; Tignor, M.; Ebi, K.L.

    2011-09-15

    Understanding the effects of increasing atmospheric CO{sub 2} concentrations on ocean chemistry, commonly termed ocean acidification, as well as associated impacts on marine biology and ecosystems, is an important component of scientific knowledge about global change. The Fifth Assessment Report (AR5) of the Intergovernmental Panel on Climate Change (IPCC) will include comprehensive coverage of ocean acidification and its impacts, including potential feedbacks to the climate system. To support ongoing AR5 assessment efforts, Working Group II and Working Group I (WGII and WGI) of the IPCC held a joint Workshop on Impacts of Ocean Acidification on Marine Biology and Ecosystems in Okinawa, Japan, from 17 to 19 January 2011. The workshop convened experts from the scientific community, including WGII and WGI AR5 authors and review editors, to synthesise scientific understanding of changes in ocean chemistry due to increased CO{sub 2} and of impacts of this changing chemistry on marine organisms, ecosystems, and ecosystem services. This workshop report summarises the scientific content and perspectives presented and discussed during the workshop. It provides syntheses of these perspectives for the workshop's core topics: (i) the changing chemistry of the oceans, (ii) impacts of ocean acidification for individual organisms, and (iii) scaling up responses from individual organisms to ecosystems. It also presents summaries of workshop discussions of key cross-cutting themes, ranging from detection and attribution of ocean acidification and its impacts to understanding ocean acidification in the context of other stressors on marine systems. Additionally, the workshop report includes extended abstracts for keynote and poster presentations at the workshop. (Author)

  16. Garnet Signatures in Geophysical and Geochemical Observations: Insights into the Thermo-Petrological Structure of Oceanic Upper Mantle

    Science.gov (United States)

    Grose, C. J.; Afonso, J. C.

    2013-12-01

    We have developed new physically comprehensive thermal plate models of the oceanic lithosphere which incorporate temperature- and pressure-dependent heat transport properties and thermal expansivity, melting beneath ridges, hydrothermal circulation near ridge axes, and insulating oceanic crust. These models provide good fits to global databases of seafloor topography and heat flow, and seismic evidence of thermal structure near ridge axes. We couple these thermal plate models with thermodynamic models to predict the petrology of oceanic lithosphere. Geoid height predictions from our models suggest that there is a strong anomaly in geoid slope (over age) above ~25 Ma lithosphere due to the topography of garnet-field mantle. A similar anomaly is also present in geoid data over fracture zones. In addition, we show that a new assessment of a large database of ocean island basalt Sm/Yb systematics indicates that there is an unmistakable step-like increase in Sm/Yb values around 15-20 Ma, indicating the presence of garnet. To explain this feature, we have attempted to couple our thermo-petrological models of oceanic upper mantle with an open system, non-modal, dynamic melting model with diffusion kinetics to investigate trace element partitioning in an ascending mantle column.

  17. Molecular biology in studies of oceanic primary production

    International Nuclear Information System (INIS)

    LaRoche, J.; Falkowski, P.G.; Geider, R.

    1992-01-01

    Remote sensing and the use of moored in situ instrumentation has greatly improved our ability to measure phytoplankton chlorophyll and photosynthesis on global scales with high temporal resolution. However, the interpretation of these measurements and their significance with respect to the biogeochemical cycling of carbon relies on their relationship with physiological and biochemical processes in phytoplankton. For example, the use of satellite images of surface chlorophyll to estimate primary production is often based on the functional relationship between photosynthesis and irradiance. A variety of environmental factors such as light, temperature, nutrient availability affect the photosynthesis/irradiance (P vs I) relationship in phytoplankton. We present three examples showing how molecular biology can be used to provide basic insight into the factors controlling primary productivity at three different levels of complexity: 1. Studies of light intensity regulation in unicellular alga show how molecular biology can help understand the processing of environmental cues leading to the regulation of photosynthetic gene expression. 2. Probing of the photosynthetic apparatus using molecular techniques can be used to test existing mechanistic models derived from the interpretation of physiological and biophysical measurements. 3. Exploratory work on the expression of specific proteins during nutrient-limited growth of phytoplankton may lead to the identification and production of molecular probes for field studies

  18. Making United States Integrated Ocean Observing System (U.S. IOOS) inclusive of marine biological resources

    Science.gov (United States)

    Moustahfid, H.; Potemra, J.; Goldstein, P.; Mendelssohn, R.; Desrochers, A.

    2011-01-01

    An important Data Management and Communication (DMAC) goal is to enable a multi-disciplinary view of the ocean environment by facilitating discovery and integration of data from various sources, projects and scientific domains. United States Integrated Ocean Observing System (U.S. IOOS) DMAC functional requirements are based upon guidelines for standardized data access services, data formats, metadata, controlled vocabularies, and other conventions. So far, the data integration effort has focused on geophysical U.S. IOOS core variables such as temperature, salinity, ocean currents, etc. The IOOS Biological Observations Project is addressing the DMAC requirements that pertain to biological observations standards and interoperability applicable to U.S. IOOS and to various observing systems. Biological observations are highly heterogeneous and the variety of formats, logical structures, and sampling methods create significant challenges. Here we describe an informatics framework for biological observing data (e.g. species presence/absence and abundance data) that will expand information content and reconcile standards for the representation and integration of these biological observations for users to maximize the value of these observing data. We further propose that the approach described can be applied to other datasets generated in scientific observing surveys and will provide a vehicle for wider dissemination of biological observing data. We propose to employ data definition conventions that are well understood in U.S. IOOS and to combine these with ratified terminologies, policies and guidelines. ?? 2011 MTS.

  19. Potential feedback mechanism between phytoplankton and upper ocean circulation with oceanic radiative transfer processes influenced by phytoplankton - Numerical ocean, general circulation models and an analytical solution

    Digital Repository Service at National Institute of Oceanography (India)

    Nakamoto, S.; Kano, M.; PrasannaKumar, S.; Oberhuber, J.M.; Muneyama, K.; Ueyoshi, K.; Subrahmanyam, B.; Nakata, K.; Lai, C.A.; Frouin, R.

    29208, USA 'Ocean Engineering Department, Tokai University, Shimizu, Japan "LOS Alamos National Laboratory, Los Alamos, NM, USA *Corresponding author. E-mail address: nakamotoocean@aol.com (S. Nakamoto?. Elsevier Oceanography Series 73 255 Edited...

  20. Biological invasions on oceanic islands: Implications for island ecosystems and avifauna

    Science.gov (United States)

    Dean E. Pearson

    2009-01-01

    Biological invasions present a global threat to biodiversity, but oceanic islands are the systems hardest hit by invasions. Islands are generally depauperate in species richness, trophic complexity, and functional diversity relative to comparable mainland ecosystems. This situation results in low biotic resistance to invasion and many empty niches for invaders to...

  1. The biological carbon pump in the ocean: Reviewing model representations and its feedbacks on climate perturbations.

    Science.gov (United States)

    Hülse, Dominik; Arndt, Sandra; Ridgwell, Andy; Wilson, Jamie

    2016-04-01

    The ocean-sediment system, as the biggest carbon reservoir in the Earth's carbon cycle, plays a crucial role in regulating atmospheric carbon dioxide concentrations and climate. Therefore, it is essential to constrain the importance of marine carbon cycle feedbacks on global warming and ocean acidification. Arguably, the most important single component of the ocean's carbon cycle is the so-called "biological carbon pump". It transports carbon that is fixed in the light-flooded surface layer of the ocean to the deep ocean and the surface sediment, where it is degraded/dissolved or finally buried in the deep sediments. Over the past decade, progress has been made in understanding different factors that control the efficiency of the biological carbon pump and their feedbacks on the global carbon cycle and climate (i.e. ballasting = ocean acidification feedback; temperature dependant organic matter degradation = global warming feedback; organic matter sulphurisation = anoxia/euxinia feedback). Nevertheless, many uncertainties concerning the interplay of these processes and/or their relative significance remain. In addition, current Earth System Models tend to employ empirical and static parameterisations of the biological pump. As these parametric representations are derived from a limited set of present-day observations, their ability to represent carbon cycle feedbacks under changing climate conditions is limited. The aim of my research is to combine past carbon cycling information with a spatially resolved global biogeochemical model to constrain the functioning of the biological pump and to base its mathematical representation on a more mechanistic approach. Here, I will discuss important aspects that control the efficiency of the ocean's biological carbon pump, review how these processes of first order importance are mathematically represented in existing Earth system Models of Intermediate Complexity (EMIC) and distinguish different approaches to approximate

  2. AMS Observations over Coastal California from the Biological and Oceanic Atmospheric Study (BOAS)

    Science.gov (United States)

    Bates, K. H.; Coggon, M. M.; Hodas, N.; Negron, A.; Ortega, A. M.; Crosbie, E.; Sorooshian, A.; Nenes, A.; Flagan, R. C.; Seinfeld, J.

    2015-12-01

    In July 2015, fifteen research flights were conducted on a US Navy Twin Otter aircraft as part of the Biological and Oceanic Atmospheric Study (BOAS) campaign. The flights took place near the California coast at Monterey, to investigate the effects of sea surface temperature and algal blooms on oceanic particulate emissions, the diurnal mixing of urban pollution with other airmasses, and the impacts of biological aerosols on the California atmosphere. The aircraft's payload included an aerosol mass spectrometer (AMS), a differential mobility analyzer, a cloud condensation nuclei counter, a counterflow virtual impactor, a cloudwater collector, and two instruments designed to detect biological aerosols - a wideband integrated biological spectrometer and a SpinCon II - as well as a number of meteorology and aerosol probes, two condensation particle counters, and instruments to measure gas-phase CO, CO2, O3, and NOx. Here, we describe in depth the objectives and outcomes of BOAS and report preliminary results, primarily from the AMS. We detail the spatial characteristics and meteorological variability of speciated aerosol components over a strong and persistent bloom of Pseudo-Nitzschia, the harmful algae that cause 'red tide', and report newly identified AMS markers for biological particles. Finally, we compare these results with data collected during BOAS over urban, forested, and agricultural environments, and describe the mixing observed between oceanic and terrestrial airmasses.

  3. Diurnal variability of upper ocean temperature and heat budget in the southern Bay of Bengal during October-November, 1998 (BOBMEX-Pilot)

    Digital Repository Service at National Institute of Oceanography (India)

    Murty, V.S.N.; RameshBabu, V.; Rao, L.V.G.; Prabhu, C.V.; Tilvi, V.

    °N locations along 87°E during October -- November, 1998 under BOBMEX-Pilot programme. These data have been analysed to examine the diurnal variability of upper oceanic heat budget and to estimate the eddy diffusivity coefficient of heat in the upper...

  4. Examining portfolio-based assessment in an upper-level biology course

    Science.gov (United States)

    Ziegler, Brittany Ann

    Historically, students have been viewed as empty vessels and passive participants in the learning process but students actually are active forming their own conceptions. One way student learning is impacted is through assessment. Alternative assessment, which contrasts traditional assessment methods, takes into account how students learn by promoting engagement and construction of knowledge This dissertation explores portfolio-based assessment, a method of alternative assessment, which requires students to compose a purposeful collection of work demonstrating their knowledge in an upper-level biology course. The research objectives include characterizing and contributing to the understanding of portfolio-based assessment in higher education, examining reflection and inquiry portfolio components, determining student knowledge of biological concepts, and investigating student integrative thinking through the transformation of reflections into concept webs One main finding includes the majority of reflections categorized as naive or novice in quality. There was no difference in quality of reflections among biological topic. There was a relatively equal amount of high and low cognitive level questions. Students' knowledge of biological concepts significantly increased from the beginning to end of the course. Student written reflections were transformed into concept webs to allow for examination of student integrative thinking. Concepts, relationships, and interconnections in concept webs showed variation but declined by the end of the semester This study is one of the first examining portfolio-based assessment in an upper-level biology course We do not contend that this method of assessment is the only way to promote student learning but portfolio-based assessment may be a tool that can transform science education but currently the role of portfolio-based assessment in science education remains unclear. Additional research needs to be conducted before we will fully

  5. Effects of UVB radiation on net community production in the upper global ocean

    KAUST Repository

    Garcia-Corral, Lara S.

    2016-08-31

    Aim Erosion of the stratospheric ozone layer together with oligotrophication of the subtropical ocean is leading to enhanced exposure to ultraviolet B (UVB) radiation in ocean surface waters. The impact of increased exposure to UVB on planktonic primary producers and heterotrophs is uncertain. Here we test the null hypothesis that net community production (NCP) of plankton communities in surface waters of the tropical and subtropical ocean is not affected by ambient UVB radiation and extend this test to the global ocean, including the polar oceans and the Mediterranean Sea using previous results. Location We conducted experiments with 131 surface communities sampled during a circumnavigation cruise along the tropical and subtropical ocean and combined these results with 89 previous reports encompassing the Atlantic, Pacific, Arctic and Southern Oceans and the Mediterranean Sea. Methods The use of quartz (transparent to UVB radiation) and borosilicate glass materials (opaque to most UVB) for incubations allowed us to compare NCP between communities where UVB is excluded and those receiving natural UVB radiation. Results We found that NCP varies when exposed to natural UVB radiation compared to those where UVB was removed. NCP of autotrophic communities tended to decrease under natural UVB radiation, whereas the NCP of heterotrophic communities tended to increase. However, these variations showed the opposite trend under higher levels of UVB radiation. Main conclusions Our results suggest that earlier estimates of NCP for surface communities, which were hitherto derived using materials blocking UVB radiation were biased, with the direction and magnitude of this bias depending on the metabolic status of the communities and the underwater penetration of UVB radiation.

  6. Mission Moho: Rationale for drilling deep through the ocean crust into the upper mantle

    Science.gov (United States)

    Ildefonse, B.; Abe, N.; Kelemen, P. B.; Kumagai, H.; Teagle, D. A. H.; Wilson, D. S.; Moho Proponents, Mission

    2009-04-01

    Sampling a complete section of the ocean crust to the Moho was the original inspiration for scientific ocean drilling, and remains the main goal of the 21st Century Mohole Initiative in the IODP Science Plan. Fundamental questions about the composition, structure, and geophysical characteristics of the ocean lithosphere, and about the magnitude of chemical exchanges between the mantle, crust and oceans remain unresolved due to the absence of in-situ samples and measurements. The geological nature of the Mohorovičić discontinuity itself remains poorly constrained. "Mission Moho" is a proposal that was submitted to IODP in April 2007, with the ambition to drill completely through intact oceanic crust formed at a fast spreading rate, across the Moho and into the uppermost mantle. Although, eventually, no long-term mission was approved by IODP, the scientific objectives related to deep drilling in the ocean crust remain essential to our understanding of the Earth. These objectives are to : - Determine the geological meaning of the Moho in different oceanic settings, determine the in situ composition, structure and physical properties of the uppermost mantle, and understand mantle melt migration, - Determine the bulk composition of the oceanic crust to establish the chemical links between erupted lavas and primary mantle melts, understand the extent and intensity of seawater hydrothermal exchange with the lithosphere, and estimate the chemical fluxes returned to the mantle by subduction, - Test competing hypotheses of the ocean crust accretion at fast spreading mid-ocean ridges, and quantify the linkages and feedbacks between magma intrusion, hydrothermal circulation and tectonic activity, - Calibrate regional seismic measurements against recovered cores and borehole measurements, and understand the origin of marine magnetic anomalies, - Establish the limits of life in the ocean lithosphere. The "MoHole" was planned as the final stage of Mission Moho, which requires

  7. Nutrient availability and the ultimate control of the biological carbon pump in the western tropical South Pacific Ocean

    Science.gov (United States)

    Moutin, Thierry; Wagener, Thibaut; Caffin, Mathieu; Fumenia, Alain; Gimenez, Audrey; Baklouti, Melika; Bouruet-Aubertot, Pascale; Pujo-Pay, Mireille; Leblanc, Karine; Lefevre, Dominique; Helias Nunige, Sandra; Leblond, Nathalie; Grosso, Olivier; de Verneil, Alain

    2018-05-01

    Surface waters (0-200 m) of the western tropical South Pacific (WTSP) were sampled along a longitudinal 4000 km transect (OUTPACE cruise, DOI: 10.17600/15000900) during the austral summer (stratified) period (18 February to 3 April 2015) between the Melanesian Archipelago (MA) and the western part of the SP gyre (WGY). Two distinct areas were considered for the MA, the western MA (WMA), and the eastern MA (EMA). The main carbon (C), nitrogen (N), and phosphorus (P) pools and fluxes provide a basis for the characterization of the expected trend from oligotrophy to ultra-oligotrophy, and the building of first-order budgets at the daily and seasonal timescales (using climatology). Sea surface chlorophyll a well reflected the expected oligotrophic gradient with higher values obtained at WMA, lower values at WGY, and intermediate values at EMA. As expected, the euphotic zone depth, the deep chlorophyll maximum, and nitracline depth deepen from west to east. Nevertheless, phosphaclines and nitraclines did not match. The decoupling between phosphacline and nitracline depths in the MA allows for excess P to be locally provided in the upper water by winter mixing. We found a significant biological soft tissue carbon pump in the MA sustained almost exclusively by dinitrogen (N2) fixation and essentially controlled by phosphate availability in this iron-rich environment. The MA appears to be a net sink for atmospheric CO2, while the WGY is in quasi-steady state. We suggest that the necessary excess P, allowing the success of nitrogen fixers and subsequent carbon production and export, is mainly brought to the upper surface by local deep winter convection at an annual timescale rather than by surface circulation. While the origin of the decoupling between phosphacline and nitracline remains uncertain, the direct link between local P upper water enrichment, N2 fixation, and organic carbon production and export, offers a possible shorter timescale than previously thought between

  8. The electrical conductivity of the upper mantle and lithosphere from satellite magnetic signal due to ocean tidal flow

    Science.gov (United States)

    Schnepf, N. R.; Kuvshinov, A. V.; Grayver, A.; Sabaka, T. J.; Olsen, N.

    2015-12-01

    Global electromagnetic (EM) studies provide information on mantle electrical conductivity with the ultimate aim of understanding the composition, structure, and dynamics of Earth's interior. There is great much interest in mapping the global conductivity of the lithosphere and upper mantle (i.e., depths of 10-400 km) because recent laboratory experiments demonstrate that the electrical conductivity of minerals in these regions are greatly affected by small amounts of water or by partial melt. For decades, studies of lithospheric/mantle conductivity were based on interpretation of magnetic data from a global network of observatories. The recent expansion in magnetic data from low-Earth orbiting satellite missions (Ørsted, CHAMP, SAC-C, and Swarm) has led to a rising interest in probing Earth from space. The largest benefit of using satellite data is much improved spatial coverage. Additionally, and in contrast to ground-based data, satellite data are overall uniform and very high quality. Probing the conductivity of the lithosphere and upper mantle requires EM variations with periods of a few hours. This is a challenging period range for global EM studies since the ionospheric (Sq) source dominates these periods and has a much more complex spatial structure compared to the magnetospheric ring current. Moreover, satellite-based EM induction studies in principle cannot use Sq data since the satellites fly above the Sq source causing the signals to be seen by the satellite as a purely internal source, thus precluding the separation of satellite Sq signals into internal and external parts. Lastly, magnetospheric and ionospheric sources interact inductively with Earth's conducting interior. Fortunately, there exists an alternative EM source in the Sq period range: electric currents generated by oceanic tides. Tides instead interact galvanically with the lithosphere (i.e. by direct coupling of the source currents in the ocean with the underlying substrate), enabling

  9. Observing the seasonal cycle of the upper ocean in the Ross Sea, Antarctica, with autonomous profiling floats

    Science.gov (United States)

    Porter, D. F.; Springer, S. R.; Padman, L.; Fricker, H. A.; Bell, R. E.

    2017-12-01

    The upper layers of the Southern Ocean where it meets the Antarctic ice sheet undergoes a large seasonal cycle controlled by surface radiation and by freshwater fluxes, both of which are strongly influenced by sea ice. In regions where seasonal sea ice and icebergs limit use of ice-tethered profilers and conventional moorings, autonomous profiling floats can sample the upper ocean. The deployment of seven Apex floats (by sea) and six ALAMO floats (by air) provides unique upper ocean hydrographic data in the Ross Sea close to the Ross Ice Shelf front. A novel choice of mission parameters - setting parking depth deeper than the seabed - limits their drift, allowing us to deploy the floats close to the ice shelf front, while sea ice avoidance algorithms allow the floats to to sample through winter under sea ice. Hydrographic profiles show the detailed development of the seasonal mixed layer close to the Ross front, and interannual variability of the seasonal mixed layer and deeper water masses on the central Ross Sea continental shelf. After the sea ice breakup in spring, a warm and fresh surface mixed layer develops, further warming and deepening throughout the summer. The mixed layer deepens, with maximum temperatures exceeding 0ºC in mid-February. By March, the surface energy budget becomes negative and sea ice begins to form, creating a cold, saline and dense surface layer. Once these processes overcome the stable summer stratification, convection erodes the surface mixed layer, mixing some heat downwards to deeper layers. There is considerable interannual variability in the evolution and strength of the surface mixed layer: summers with shorter ice-free periods result in a cooler and shallower surface mixed layer, which accumulates less heat than the summers with longer ice-free periods. Early ice breakup occurred in all floats in 2016/17 summer, enhancing the absorbed solar flux leading to a warmer surface mixed layer. Together, these unique measurements from

  10. Upper ocean variability in the Bay of Bengal during the tropical cyclones Nargis and Laila

    Digital Repository Service at National Institute of Oceanography (India)

    Maneesha, K.; Murty, V.S.N.; Ravichandran, M.; Lee, T.; Yu, W.; McPhaden, M.J.

    -monsoon north Bay of Bengal, Atmos. Sci. Let. Doi:10.1002/asl.162. Shay, L.K., G.J.Goni and P.G. Black (2000) , Effects of warm oceanic features on hurricane opal, Mon.Wea.Rev., 128, 1366-1383 Subrahmanyam, B., V.S.N. Murty, Ryan J. Sharp and James J...

  11. Indian summer monsoon rainfall variability during 2014 and 2015 and associated Indo-Pacific upper ocean temperature patterns

    Science.gov (United States)

    Kakatkar, Rashmi; Gnanaseelan, C.; Chowdary, J. S.; Parekh, Anant; Deepa, J. S.

    2018-02-01

    In this study, factors responsible for the deficit Indian Summer Monsoon (ISM) rainfall in 2014 and 2015 and the ability of Indian Institute of Tropical Meteorology-Global Ocean Data Assimilation System (IITM-GODAS) in representing the oceanic features are examined. IITM-GODAS has been used to provide initial conditions for seasonal forecast in India during 2014 and 2015. The years 2014 and 2015 witnessed deficit ISM rainfall but were evolved from two entirely different preconditions over Pacific. This raises concern over the present understanding of the role of Pacific Ocean on ISM variability. Analysis reveals that the mechanisms associated with the rainfall deficit over the Indian Subcontinent are different in the two years. It is found that remote forcing in summer of 2015 due to El Niño is mostly responsible for the deficit monsoon rainfall through changes in Walker circulation and large-scale subsidence. In the case of the summer of 2014, both local circulation with anomalous anticyclone over central India and intrusion of mid-latitude dry winds from north have contributed for the deficit rainfall. In addition to the above, Tropical Indian Ocean (TIO) sea surface temperature (SST) and remote forcing from Pacific Ocean also modulated the ISM rainfall. It is observed that Pacific SST warming has extended westward in 2014, making it a basin scale warming unlike the strong El Niño year 2015. The eastern equatorial Indian Ocean is anomalously warmer than west in summer of 2014, and vice versa in 2015. These differences in SST in both tropical Pacific and TIO have considerable impact on ISM rainfall in 2014 and 2015. The study reveals that initializing coupled forecast models with proper upper ocean temperature over the Indo-Pacific is therefore essential for improved model forecast. It is important to note that the IITM-GODAS which assimilates only array for real-time geostrophic oceanography (ARGO) temperature and salinity profiles could capture most of the

  12. Stirring Up the Biological Pump: Vertical Mixing and Carbon Export in the Southern Ocean

    Science.gov (United States)

    Stukel, Michael R.; Ducklow, Hugh W.

    2017-09-01

    The biological carbon pump (BCP) transports organic carbon from the surface to the ocean's interior via sinking particles, vertically migrating organisms, and passive transport of organic matter by advection and diffusion. While many studies have quantified sinking particles, the magnitude of passive transport remains poorly constrained. In the Southern Ocean weak thermal stratification, strong vertical gradients in particulate organic matter, and weak vertical nitrate gradients suggest that passive transport from the euphotic zone may be particularly important. We compile data from seasonal time series at a coastal site near Palmer Station, annual regional cruises in the Western Antarctic Peninsula (WAP), cruises throughout the broader Southern Ocean, and SOCCOM (Southern Ocean Carbon and Climate Observations and Modeling) autonomous profiling floats to estimate spatial and temporal patterns in vertical gradients of nitrate, particulate nitrogen (PN), and dissolved organic carbon. Under a steady state approximation, the ratio of ∂PN/∂z to ∂NO3-/∂z suggests that passive transport of PN may be responsible for removing 46% (37%-58%) of the nitrate introduced into the surface ocean of the WAP (with dissolved organic matter contributing an additional 3-6%) and for 23% (19%-28%) of the BCP in the broader Southern Ocean. A simple model parameterized with in situ nitrate, PN, and primary production data suggested that passive transport was responsible for 54% of the magnitude of the BCP in the WAP. Our results highlight the potential importance of passive transport (by advection and diffusion) of organic matter in the Southern Ocean but should only be considered indicative of high passive transport (rather than conclusive evidence) due to our steady state assumptions.

  13. Glider and remote sensing observations of the upper ocean response to an extended shallow coastal diversion of wastewater effluent

    KAUST Repository

    Seegers, Bridget N.; Teel, Elizabeth N.; Kudela, Raphael M.; Caron, David A.; Jones, Burton

    2016-01-01

    The Orange County Sanitation District (OCSD) diverted wastewater discharge (5.3 × 108 l d−1) from its primary deep (56 m) outfall 8 km offshore, to a secondary shallower (16 m) outfall 1.6 km offshore for a period of three weeks. It was anticipated that the low salinity and density of the effluent would cause it to rise to the surface with limited dilution, elevating nutrient concentrations in near-surface waters and stimulating phytoplankton blooms in the region. Three Teledyne Webb Slocum gliders and a Liquid Robotics surface wave glider were deployed on transects near the outfalls to acquire high spatial and temporal coverage of physical and chemical parameters before, during, and after the wastewater diversion. Combined autonomous underwater vehicle (AUV) and MODIS-Aqua satellite ocean color data indicated that phytoplankton biomass increased in the upper water column in response to the diversion, but that the magnitude of the response was spatially patchy and significantly less than expected. Little evidence of the plume or its effects was detectable 72 h following the diversion. The effluent plume exhibited high rates of dilution and mixed throughout the upper 20 m and occasionally throughout the upper 40 m during the diversion. Rapid plume advection and dilution appeared to contribute to the muted impact of the nutrient-rich effluent on the phytoplankton community in this coastal ecosystem.

  14. Glider and remote sensing observations of the upper ocean response to an extended shallow coastal diversion of wastewater effluent

    KAUST Repository

    Seegers, Bridget N.

    2016-06-21

    The Orange County Sanitation District (OCSD) diverted wastewater discharge (5.3 × 108 l d−1) from its primary deep (56 m) outfall 8 km offshore, to a secondary shallower (16 m) outfall 1.6 km offshore for a period of three weeks. It was anticipated that the low salinity and density of the effluent would cause it to rise to the surface with limited dilution, elevating nutrient concentrations in near-surface waters and stimulating phytoplankton blooms in the region. Three Teledyne Webb Slocum gliders and a Liquid Robotics surface wave glider were deployed on transects near the outfalls to acquire high spatial and temporal coverage of physical and chemical parameters before, during, and after the wastewater diversion. Combined autonomous underwater vehicle (AUV) and MODIS-Aqua satellite ocean color data indicated that phytoplankton biomass increased in the upper water column in response to the diversion, but that the magnitude of the response was spatially patchy and significantly less than expected. Little evidence of the plume or its effects was detectable 72 h following the diversion. The effluent plume exhibited high rates of dilution and mixed throughout the upper 20 m and occasionally throughout the upper 40 m during the diversion. Rapid plume advection and dilution appeared to contribute to the muted impact of the nutrient-rich effluent on the phytoplankton community in this coastal ecosystem.

  15. Glider and remote sensing observations of the upper ocean response to an extended shallow coastal diversion of wastewater effluent

    Science.gov (United States)

    Seegers, Bridget N.; Teel, Elizabeth N.; Kudela, Raphael M.; Caron, David A.; Jones, Burton H.

    2017-02-01

    The Orange County Sanitation District (OCSD) diverted wastewater discharge (5.3 × 108 l d-1) from its primary deep (56 m) outfall 8 km offshore, to a secondary shallower (16 m) outfall 1.6 km offshore for a period of three weeks. It was anticipated that the low salinity and density of the effluent would cause it to rise to the surface with limited dilution, elevating nutrient concentrations in near-surface waters and stimulating phytoplankton blooms in the region. Three Teledyne Webb Slocum gliders and a Liquid Robotics surface wave glider were deployed on transects near the outfalls to acquire high spatial and temporal coverage of physical and chemical parameters before, during, and after the wastewater diversion. Combined autonomous underwater vehicle (AUV) and MODIS-Aqua satellite ocean color data indicated that phytoplankton biomass increased in the upper water column in response to the diversion, but that the magnitude of the response was spatially patchy and significantly less than expected. Little evidence of the plume or its effects was detectable 72 h following the diversion. The effluent plume exhibited high rates of dilution and mixed throughout the upper 20 m and occasionally throughout the upper 40 m during the diversion. Rapid plume advection and dilution appeared to contribute to the muted impact of the nutrient-rich effluent on the phytoplankton community in this coastal ecosystem.

  16. Small-Scale Bio-Optical Distributions in the Upper Ocean (AASERT)

    National Research Council Canada - National Science Library

    Cowles, Timothy

    2000-01-01

    This ASSERT project supported a graduate student, Ms. Lisa Eisner, to apply newly-developed, state-of-the-art bio-optical instrumentation to the analysis of phytoplankton processes in biological oceanography. Ms...

  17. Community respiration/production and bacterial activity in the upper water column of the central Arctic Ocean

    Science.gov (United States)

    Sherr, Barry F.; Sherr, Evelyn B.

    2003-04-01

    Community metabolism (respiration and production) and bacterial activity were assessed in the upper water column of the central Arctic Ocean during the SHEBA/JOIS ice camp experiment, October 1997-September 1998. In the upper 50 m, decrease in integrated dissolved oxygen (DO) stocks over a period of 124 d in mid-winter suggested a respiration rate of ˜3.3 nM O 2 h -1 and a carbon demand of ˜4.5 gC m -2. Increase in 0-50 m integrated stocks of DO during summer implied a net community production of ˜20 gC m -2. Community respiration rates were directly measured via rate of decrease in DO in whole seawater during 72-h dark incubation experiments. Incubation-based respiration rates were on average 3-fold lower during winter (11.0±10.6 nM O 2 h -1) compared to summer (35.3±24.8 nM O 2 h -1). Bacterial heterotrophic activity responded strongly, without noticeable lag, to phytoplankton growth. Rate of leucine incorporation by bacteria (a proxy for protein synthesis and cell growth) increased ˜10-fold, and the cell-specific rate of leucine incorporation ˜5-fold, from winter to summer. Rates of production of bacterial biomass in the upper 50 m were, however, low compared to other oceanic regions, averaging 0.52±0.47 ngC l -1 h -1 during winter and 5.1±3.1 ngC l -1 h -1 during summer. Total carbon demand based on respiration experiments averaged 2.4±2.3 mgC m -3 d -1 in winter and 7.8±5.5 mgC m -3 d -1 in summer. Estimated bacterial carbon demand based on bacterial productivity and an assumed 10% gross growth efficiency was much lower, averaging about 0.12±0.12 mgC m -3 d -1 in winter and 1.3±0.7 mgC m -3 d -1 in summer. Our estimates of bacterial activity during summer were an order of magnitude less than rates reported from a summer 1994 study in the central Arctic Ocean, implying significant inter-annual variability of microbial processes in this region.

  18. Quantifying pCO2 in biological ocean acidification experiments: A comparison of four methods.

    Science.gov (United States)

    Watson, Sue-Ann; Fabricius, Katharina E; Munday, Philip L

    2017-01-01

    Quantifying the amount of carbon dioxide (CO2) in seawater is an essential component of ocean acidification research; however, equipment for measuring CO2 directly can be costly and involve complex, bulky apparatus. Consequently, other parameters of the carbonate system, such as pH and total alkalinity (AT), are often measured and used to calculate the partial pressure of CO2 (pCO2) in seawater, especially in biological CO2-manipulation studies, including large ecological experiments and those conducted at field sites. Here we compare four methods of pCO2 determination that have been used in biological ocean acidification experiments: 1) Versatile INstrument for the Determination of Total inorganic carbon and titration Alkalinity (VINDTA) measurement of dissolved inorganic carbon (CT) and AT, 2) spectrophotometric measurement of pHT and AT, 3) electrode measurement of pHNBS and AT, and 4) the direct measurement of CO2 using a portable CO2 equilibrator with a non-dispersive infrared (NDIR) gas analyser. In this study, we found these four methods can produce very similar pCO2 estimates, and the three methods often suited to field-based application (spectrophotometric pHT, electrode pHNBS and CO2 equilibrator) produced estimated measurement uncertainties of 3.5-4.6% for pCO2. Importantly, we are not advocating the replacement of established methods to measure seawater carbonate chemistry, particularly for high-accuracy quantification of carbonate parameters in seawater such as open ocean chemistry, for real-time measures of ocean change, nor for the measurement of small changes in seawater pCO2. However, for biological CO2-manipulation experiments measuring differences of over 100 μatm pCO2 among treatments, we find the four methods described here can produce similar results with careful use.

  19. Observations and Modeling of Upper Ocean Hydrography in the Western Arctic With Implications for Acoustic Propagation

    Science.gov (United States)

    2016-12-01

    Poland 52 variability under the influence of sea-ice growth and melt, river run-off, solar and longwave radiation ( clouds ), and seasonally...Several global climate models were evaluated against historical and recent hydrographic observations and found to inadequately represent key upper...Canada Basin, climate system model 15. NUMBER OF PAGES 143 16. PRICE CODE 17. SECURITY CLASSIFICATION OF REPORT Unclassified 18. SECURITY

  20. Upper ocean currents and sea surface temperatures (SST) from Satellite-tracked drifting buoys (drifters) as part of the Global Drifter Program for Hawaii region 1980/02/01 - 2009/03/31 (NODC Accession 0063296)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Satellite-tracked drifting buoys ("drifters") collect measurements of upper ocean currents and sea surface temperatures (SST) around the world as part of the Global...

  1. Biologic lung volume reduction in advanced upper lobe emphysema: phase 2 results.

    Science.gov (United States)

    Criner, Gerard J; Pinto-Plata, Victor; Strange, Charlie; Dransfield, Mark; Gotfried, Mark; Leeds, William; McLennan, Geoffrey; Refaely, Yael; Tewari, Sanjiv; Krasna, Mark; Celli, Bartolome

    2009-05-01

    Biologic lung volume reduction (BioLVR) is a new endobronchial treatment for advanced emphysema that reduces lung volume through tissue remodeling. Assess the safety and therapeutic dose of BioLVR hydrogel in upper lobe predominant emphysema. Open-labeled, multicenter phase 2 dose-ranging studies were performed with BioLVR hydrogel administered to eight subsegmental sites (four in each upper lobe) involving: (1) low-dose treatment (n = 28) with 10 ml per site (LD); and (2) high-dose treatment (n = 22) with 20 ml per site (HD). Safety was assessed by the incidence of serious medical complications. Efficacy was assessed by change from baseline in pulmonary function tests, dyspnea score, 6-minute walk distance, and health-related quality of life. After treatment there were no deaths and four serious treatment-related complications. A reduction in residual volume to TLC ratio at 12 weeks (primary efficacy outcome) was achieved with both LD (-6.4 +/- 9.3%; P = 0.002) and HD (-5.5 +/- 9.4%; P = 0.028) treatments. Improvements in pulmonary function in HD (6 mo: DeltaFEV(1) = +15.6%; P = 0.002; DeltaFVC = +9.1%; P = 0.034) were greater than in LD patients (6 mo: DeltaFEV(1) = +6.7%; P = 0.021; DeltaFVC = +5.1%; P = 0.139). LD- and HD-treated groups both demonstrated improved symptom scores and health-related quality of life. BioLVR improves physiology and functional outcomes up to 6 months with an acceptable safety profile in upper lobe predominant emphysema. Overall improvement was greater and responses more durable with 20 ml per site than 10 ml per site dosing. Clinical trial registered with www.clinicaltrials.gov (NCT 00435253 and NCT 00515164).

  2. Multiple, novel biologically active endophytic actinomycetes isolated from upper Amazonian rainforests.

    Science.gov (United States)

    Bascom-Slack, Carol A; Ma, Cong; Moore, Emily; Babbs, Beatrice; Fenn, Kathleen; Greene, Joshua S; Hann, Bradley D; Keehner, Jocelyn; Kelley-Swift, Elizabeth G; Kembaiyan, Vivek; Lee, Sun Jin; Li, Puyao; Light, David Y; Lin, Emily H; Schorn, Michelle A; Vekhter, Daniel; Boulanger, Lori-Ann; Hess, W M; Vargas, Percy Núñez; Strobel, Gary A; Strobel, Scott A

    2009-08-01

    Microbial biodiversity provides an increasingly important source of medically and industrially useful compounds. We have isolated 14 actinomycete species from a collection of approximately 300 plant stem samples from the upper Amazonian rainforest in Peru. All of the cultured isolates produce substances with inhibitory activity directed at a range of potential fungal and bacterial pathogens. For some organisms, this activity is very broad in spectrum while other organisms show specific activity against a limited number of organisms. Two of these organisms preferentially inhibit bacterial test organisms over eukaryotic organisms. rDNA sequence analysis indicates that these organisms are not equivalent to any other cultured deposits in GenBank. Our results provide evidence of the untapped biodiversity in the form of biologically active microbes present within the tissues of higher plants.

  3. Biological response to climate change in the Arctic Ocean: The view from the past

    Science.gov (United States)

    Cronin, Thomas M.; Cronin, Matthew A.

    2017-01-01

    The Arctic Ocean is undergoing rapid climatic changes including higher ocean temperatures, reduced sea ice, glacier and Greenland Ice Sheet melting, greater marine productivity, and altered carbon cycling. Until recently, the relationship between climate and Arctic biological systems was poorly known, but this has changed substantially as advances in paleoclimatology, micropaleontology, vertebrate paleontology, and molecular genetics show that Arctic ecosystem history reflects global and regional climatic changes over all timescales and climate states (103–107 years). Arctic climatic extremes include 25°C hyperthermal periods during the Paleocene-Eocene (56–46 million years ago, Ma), Quaternary glacial periods when thick ice shelves and sea ice cover rendered the Arctic Ocean nearly uninhabitable, seasonally sea-ice-free interglacials and abrupt climate reversals. Climate-driven biological impacts included large changes in species diversity, primary productivity, species’ geographic range shifts into and out of the Arctic, community restructuring, and possible hybridization, but evidence is not sufficient to determine whether or when major episodes of extinction occurred.

  4. Role of upper-most crustal composition in the evolution of the Precambrian ocean-atmosphere system

    Science.gov (United States)

    Large, R. R.; Mukherjee, I.; Zhukova, I.; Corkrey, R.; Stepanov, A.; Danyushevsky, L. V.

    2018-04-01

    Recent research has emphasized the potential relationships between supercontinent cycles, mountain building, nutrient flux, ocean-atmosphere chemistry and the origin of life. The composition of the Upper-Most Continental Crust (UMCC) also figures prominently in these relationships, and yet little detailed data on each component of this complex relationship has been available for assessment. Here we provide a new set of data on the trace element concentrations, including the Rare Earth Elements (REE), in the matrix of 52 marine black shale formations spread globally through the Archean and Proterozoic. The data support previous studies on the temporal geochemistry of shales, but with some important differences. Results indicate a change in provenance of the black shales (upper-most crustal composition), from more mafic in the Archean prior to 2700 Ma, to more felsic from 2700 to 2200 Ma, followed by a return to mafic compositions from 2200 to 1850 Ma. Around 1850 to 1800 Ma there is a rapid change to uniform felsic compositions, which remained for a billion years to 800 Ma. The shale matrix geochemistry supports the assertion that the average upper-most continental source rocks for the shales changed from a mix of felsic, mafic and ultramafic prior to 2700 Ma to more felsic after 1850 Ma, with an extended transition period between. The return to more mafic UMCC from 2200 to 1850 Ma is supported by the frequency of Large Igneous Provinces (LIPs) and banded iron formations, which suggest a peak in major mantle-connected plume events and associated Fe-rich hydrothermal activity over this period. Support for the change to felsic UMCC around 1850 Ma is provided by previous geological data which shows that felsic magmas, including, A-type granites and K-Th-U-rich granites intruded vast areas of the continental crust, peaking around 1850 Ma and declining to 1000 Ma. The implications of this change in UMCC are far reaching and may go some way to explain the distinct

  5. Role of the upper ocean structure in the response of ENSO-like SST variability to global warming

    Energy Technology Data Exchange (ETDEWEB)

    Yeh, Sang-Wook [Hanyang University, Department of Environmental Marine Science, Ansan (Korea); Dewitte, Boris [Laboratoire d' Etude en Geophysique et Oceanographie Spatiale, Toulouse (France); Yim, Bo Young; Noh, Yign [Yonsei University, Department of Atmospheric Sciences, Global Environmental Laboratory, Seoul (Korea)

    2010-08-15

    The response of El Nino and Southern Oscillation (ENSO)-like variability to global warming varies comparatively between the two different climate system models, i.e., the Meteorological Research Institute (MRI) and Geophysical Fluid Dynamics Laboratory (GFDL) Coupled General Circulation Models (CGCMs). Here, we examine the role of the simulated upper ocean temperature structure in the different sensitivities of the simulated ENSO variability in the models based on the different level of CO{sub 2} concentrations. In the MRI model, the sea surface temperature (SST) undergoes a rather drastic modification, namely a tendency toward a permanent El Nino-like state. This is associated with an enhanced stratification which results in greater ENSO amplitude for the MRI model. On the other hand, the ENSO simulated by GFDL model is hardly modified although the mean temperature in the near surface layer increases. In order to understand the associated mechanisms we carry out a vertical mode decomposition of the mean equatorial stratification and a simplified heat balance analysis using an intermediate tropical Pacific model tuned from the CGCM outputs. It is found that in the MRI model the increased stratification is associated with an enhancement of the zonal advective feedback and the non-linear advection. In the GFDL model, on the other hand, the thermocline variability and associated anomalous vertical advection are reduced in the eastern equatorial Pacific under global warming, which erodes the thermocline feedback and explains why the ENSO amplitude is reduced in a warmer climate in this model. It is suggested that change in stratification associated with global warming impacts the equatorial wave dynamics in a way that enhances the second baroclinic mode over the gravest one, which leads to the change in feedback processes in the CGCMs. Our results illustrate that the upper ocean vertical structure simulated in the CGCMs is a key parameter of the sensitivity of ENSO

  6. Mismatch between observed and modeled trends in dissolved upper-ocean oxygen over the last 50 yr

    Directory of Open Access Journals (Sweden)

    L. Stramma

    2012-10-01

    Full Text Available Observations and model runs indicate trends in dissolved oxygen (DO associated with current and ongoing global warming. However, a large-scale observation-to-model comparison has been missing and is presented here. This study presents a first global compilation of DO measurements covering the last 50 yr. It shows declining upper-ocean DO levels in many regions, especially the tropical oceans, whereas areas with increasing trends are found in the subtropics and in some subpolar regions. For the Atlantic Ocean south of 20° N, the DO history could even be extended back to about 70 yr, showing decreasing DO in the subtropical South Atlantic. The global mean DO trend between 50° S and 50° N at 300 dbar for the period 1960 to 2010 is –0.066 μmol kg−1 yr−1. Results of a numerical biogeochemical Earth system model reveal that the magnitude of the observed change is consistent with CO2-induced climate change. However, the pattern correlation between simulated and observed patterns of past DO change is negative, indicating that the model does not correctly reproduce the processes responsible for observed regional oxygen changes in the past 50 yr. A negative pattern correlation is also obtained for model configurations with particularly low and particularly high diapycnal mixing, for a configuration that assumes a CO2-induced enhancement of the C : N ratios of exported organic matter and irrespective of whether climatological or realistic winds from reanalysis products are used to force the model. Depending on the model configuration the 300 dbar DO trend between 50° S and 50° N is −0.027 to –0.047 μmol kg−1 yr−1 for climatological wind forcing, with a much larger range of –0.083 to +0.027 μmol kg−1 yr−1 for different initializations of sensitivity runs with reanalysis wind forcing. Although numerical models reproduce the overall sign and, to

  7. Bacterial Diversity and Nitrogen Utilization Strategies in the Upper Layer of the Northwestern Pacific Ocean.

    Science.gov (United States)

    Li, Yuan-Yuan; Chen, Xiao-Huang; Xie, Zhang-Xian; Li, Dong-Xu; Wu, Peng-Fei; Kong, Ling-Fen; Lin, Lin; Kao, Shuh-Ji; Wang, Da-Zhi

    2018-01-01

    Nitrogen (N) is a primary limiting nutrient for bacterial growth and productivity in the ocean. To better understand bacterial community and their N utilization strategy in different N regimes of the ocean, we examined bacterial diversity, diazotrophic diversity, and N utilization gene expressions in the northwestern Pacific Ocean (NWPO) using a combination of high-throughput sequencing and real-time qPCR methods. 521 and 204 different operational taxonomic units (OTUs) were identified in the 16s rRNA and nifH libraries from nine surface samples. Of the 16s rRNA gene OTUs, 11.9% were observed in all samples while 3.5 and 15.9% were detected only in N-sufficient and N-deficient samples. Proteobacteria, Cyanobacteria and Bacteroidetes dominated the bacterial community. Prochlorococcus and Pseudoalteromonas were the most abundant at the genus level in N-deficient regimes, while SAR86, Synechococcus and SAR92 were predominant in the Kuroshio-Oyashio confluence region. The distribution of the nifH gene presented great divergence among sampling stations: Cyanobacterium_UCYN-A dominated the N-deficient stations, while clusters related to the Alpha-, Beta- , and Gamma-Proteobacteria were abundant in other stations. Temperature was the main factor that determined bacterial community structure and diversity while concentration of NO X -N was significantly correlated with structure and distribution of N 2 -fixing microorganisms. Expression of the ammonium transporter was much higher than that of urea transporter subunit A ( urtA ) and ferredoxin-nitrate reductase , while urtA had an increased expression in N-deficient surface water. The predicted ammonium transporter and ammonium assimilation enzymes were most abundant in surface samples while urease and nitrogenase were more abundant in the N-deficient regions. These findings underscore the fact that marine bacteria have evolved diverse N utilization strategies to adapt to different N habitats, and that urea metabolism is of

  8. Bacterial Diversity and Nitrogen Utilization Strategies in the Upper Layer of the Northwestern Pacific Ocean

    Directory of Open Access Journals (Sweden)

    Yuan-Yuan Li

    2018-04-01

    Full Text Available Nitrogen (N is a primary limiting nutrient for bacterial growth and productivity in the ocean. To better understand bacterial community and their N utilization strategy in different N regimes of the ocean, we examined bacterial diversity, diazotrophic diversity, and N utilization gene expressions in the northwestern Pacific Ocean (NWPO using a combination of high-throughput sequencing and real-time qPCR methods. 521 and 204 different operational taxonomic units (OTUs were identified in the 16s rRNA and nifH libraries from nine surface samples. Of the 16s rRNA gene OTUs, 11.9% were observed in all samples while 3.5 and 15.9% were detected only in N-sufficient and N-deficient samples. Proteobacteria, Cyanobacteria and Bacteroidetes dominated the bacterial community. Prochlorococcus and Pseudoalteromonas were the most abundant at the genus level in N-deficient regimes, while SAR86, Synechococcus and SAR92 were predominant in the Kuroshio-Oyashio confluence region. The distribution of the nifH gene presented great divergence among sampling stations: Cyanobacterium_UCYN-A dominated the N-deficient stations, while clusters related to the Alpha-, Beta-, and Gamma-Proteobacteria were abundant in other stations. Temperature was the main factor that determined bacterial community structure and diversity while concentration of NOX-N was significantly correlated with structure and distribution of N2-fixing microorganisms. Expression of the ammonium transporter was much higher than that of urea transporter subunit A (urtA and ferredoxin-nitrate reductase, while urtA had an increased expression in N-deficient surface water. The predicted ammonium transporter and ammonium assimilation enzymes were most abundant in surface samples while urease and nitrogenase were more abundant in the N-deficient regions. These findings underscore the fact that marine bacteria have evolved diverse N utilization strategies to adapt to different N habitats, and that urea

  9. The Experience of Using Autonomous Drifters for Studying the Ice Fields and the Ocean Upper Layer in the Arctic

    Directory of Open Access Journals (Sweden)

    S.V. Motyzhev

    2017-04-01

    Full Text Available The constructional and operational features of the BTC60/GPS/ice temperature-profiling drifters, developed in Marine Hydrophysical institute RAS for investigation of polar areas, are considered in this article. The drifters operated in completely automatic mode measuring air pressure, water temperatures at 17 depths down to 60 m, ocean pressures at 20, 40 and 60 m nominal depths and current locations. Accuracies of measurements were: +/-2 hPa for air pressure, +/-0.1°C for temperatures, +/-30 hPa for ocean pressure, 60 m for locations. Iridium satellite communication system was used for data transfer. Time delay between sample and delivery to a user did not exceed 10 minutes. More than 30 thermodrifters were developed in the Beaufort Sea – Canada Basin and central Arctic for the period from September 2012 to September 2014. Total duration of drifting buoys in operation was more of 4800 days. It was accepted the data of hourly samples about variability of ice-flows and ice field as a whole movements, thermo processes within upper water layer below ice, air pressure in near surface atmosphere of the Arctic region. The article includes some results of statistical analysis of data from drifter ID247950, the 3-year trajectory of which depended on the processes of transfer and evolution of ice fields in the Beaufort Sea – Canada Basin. Over a long period of time the Arctic buoy in-situ experiments allowed resulting about capability and reasonability to create reliable, technological and low-cost buoy network on basis of BTC60/GPS/ice drifters to monitor Arctic area of the World Ocean.

  10. On the upper ocean turbulent dissipation rate due to microscale breakers and small whitecaps

    Science.gov (United States)

    Banner, Michael L.; Morison, Russel P.

    2018-06-01

    In ocean wave modelling, accurately computing the evolution of the wind-wave spectrum depends on the source terms and the spectral bandwidth used. The wave dissipation rate source term which spectrally quantifies wave breaking and other dissipative processes remains poorly understood, including the spectral bandwidth needed to capture the essential model physics. The observational study of Sutherland and Melville (2015a) investigated the relative dissipation rate contributions of breaking waves, from large-scale whitecaps to microbreakers. They concluded that a large fraction of wave energy was dissipated by microbreakers. However, in strong contrast with their findings, our analysis of their data and other recent data sets shows that for young seas, microbreakers and small whitecaps contribute only a small fraction of the total breaking wave dissipation rate. For older seas, we find microbreakers and small whitecaps contribute a large fraction of the breaking wave dissipation rate, but this is only a small fraction of the total dissipation rate, which is now dominated by non-breaking contributions. Hence, for all the wave age conditions observed, microbreakers make an insignificant contribution to the total wave dissipation rate in the wave boundary layer. We tested the sensitivity of the results to the SM15a whitecap analysis methodology by transforming the SM15a breaking data using our breaking crest processing methodology. This resulted in the small-scale breaking waves making an even smaller contribution to the total wave dissipation rate, and so the result is independent of the breaker processing methodology. Comparison with other near-surface total TKE dissipation rate observations also support this conclusion. These contributions to the spectral dissipation rate in ocean wave models are small and need not be explicitly resolved.

  11. Multiweek cell culture project for use in upper-level biology laboratories.

    Science.gov (United States)

    Marion, Rebecca E; Gardner, Grant E; Parks, Lisa D

    2012-06-01

    This article describes a laboratory protocol for a multiweek project piloted in a new upper-level biology laboratory (BIO 426) using cell culture techniques. Human embryonic kidney-293 cells were used, and several culture media and supplements were identified for students to design their own experiments. Treatments included amino acids, EGF, caffeine, epinephrine, heavy metals, and FBS. Students researched primary literature to determine their experimental variables, made their own solutions, and treated their cells over a period of 2 wk. Before this, a sterile technique laboratory was developed to teach students how to work with the cells and minimize contamination. Students designed their experiments, mixed their solutions, seeded their cells, and treated them with their control and experimental media. Students had the choice of manipulating a number of variables, including incubation times, exposure to treatment media, and temperature. At the end of the experiment, students observed the effects of their treatment, harvested and dyed their cells, counted relative cell numbers in control and treatment flasks, and determined the ratio of living to dead cells using a hemocytometer. At the conclusion of the experiment, students presented their findings in a poster presentation. This laboratory can be expanded or adapted to include additional cell lines and treatments. The ability to design and implement their own experiments has been shown to increase student engagement in the biology-related laboratory activities as well as develop the critical thinking skills needed for independent research.

  12. Physical and biological data collected with CDT, fluorometer, and SeaSoar aboard the ship WECOMA as part of Global Ocean Ecosystem Dynamics (GLOBEC) in the North Pacific Ocean from May 30 to June 16 2000 (NODC Accession 0000986)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Physical and biological data collected with CDT, fluorometer, and SeaSoar aboard the ship WECOMA in the North Pacific Ocean from May 30 to June 16 2000. These data...

  13. Biological Modulation of Upper Ocean Physics: Simulating the Biothermal Feedback Effect in Monterey Bay, California

    Science.gov (United States)

    2014-04-08

    context of geophysical forcing [see Longhurst, 1998]. However, the abundance of marine phytoplankton belies the inefficiency of photosynthesis as a...implicit bacterial respiration back to the ammonium compartment (NA). If the depth (z) is at the maximum depth increment then D(z) is returned to the NA(z... photosynthesis in situ, J. Plankton Res., 6, 275–294. Barron, C. N., A. B. Kara, H. E. Hurlburt, C. Rowley, and L. F. Smedstad (2004), Sea surface height

  14. Scales and scaling in turbulent ocean sciences; physics-biology coupling

    Science.gov (United States)

    Schmitt, Francois

    2015-04-01

    Geophysical fields possess huge fluctuations over many spatial and temporal scales. In the ocean, such property at smaller scales is closely linked to marine turbulence. The velocity field is varying from large scales to the Kolmogorov scale (mm) and scalar fields from large scales to the Batchelor scale, which is often much smaller. As a consequence, it is not always simple to determine at which scale a process should be considered. The scale question is hence fundamental in marine sciences, especially when dealing with physics-biology coupling. For example, marine dynamical models have typically a grid size of hundred meters or more, which is more than 105 times larger than the smallest turbulence scales (Kolmogorov scale). Such scale is fine for the dynamics of a whale (around 100 m) but for a fish larvae (1 cm) or a copepod (1 mm) a description at smaller scales is needed, due to the nonlinear nature of turbulence. The same is verified also for biogeochemical fields such as passive and actives tracers (oxygen, fluorescence, nutrients, pH, turbidity, temperature, salinity...) In this framework, we will discuss the scale problem in turbulence modeling in the ocean, and the relation of Kolmogorov's and Batchelor's scales of turbulence in the ocean, with the size of marine animals. We will also consider scaling laws for organism-particle Reynolds numbers (from whales to bacteria), and possible scaling laws for organism's accelerations.

  15. Advancing Ocean Acidification Biology Using Durafet® pH Electrodes

    Directory of Open Access Journals (Sweden)

    Lydia Kapsenberg

    2017-10-01

    Full Text Available Research assessing the biological impacts of global ocean change often requires a burdensome characterization of seawater carbonate chemistry. For laboratory-based ocean acidification research, this impedes the scope of experimental design. Honeywell Durafet® III pH electrodes provide precise and continuous seawater pH measurements. In addition to use in oceanographic sensor packages, Durafets can also be used in the laboratory to track and control seawater treatments via Honeywell Universal Dual Analyzers (UDAs. Here we provide performance data, instructions, and step-by-step recommendations for use of multiple UDA-Durafets. Durafet pH measurements were within ±0.005 units pHT of spectrophotometric measurements and agreement among eight Durafets was better than ±0.005 units pHT. These results indicate equal performance to Durafets in oceanographic sensor packages, but methods for calibration and quality control differ. Use of UDA-Durafets vastly improves time-course documentation of experimental conditions and reduces person-hours dedicated to this activity. Due to the versatility of integrating Durafets in laboratory seawater systems, this technology opens the door to advance the scale of questions that the ocean acidification research community aims to address.

  16. The impact on atmospheric CO2 of iron fertilization induced changes in the ocean's biological pump

    Directory of Open Access Journals (Sweden)

    J. C. McWilliams

    2008-03-01

    Full Text Available Using numerical simulations, we quantify the impact of changes in the ocean's biological pump on the air-sea balance of CO2 by fertilizing a small surface patch in the high-nutrient, low-chlorophyll region of the eastern tropical Pacific with iron. Decade-long fertilization experiments are conducted in a basin-scale, eddy-permitting coupled physical/biogeochemical/ecological model. In contrast to previous studies, we find that most of the dissolved inorganic carbon (DIC removed from the euphotic zone by the enhanced biological export is replaced by uptake of CO2 from the atmosphere. Atmospheric uptake efficiencies, the ratio of the perturbation in air-sea CO2 flux to the perturbation in export flux across 100 m, integrated over 10 years, are 0.75 to 0.93 in our patch size-scale experiments. The atmospheric uptake efficiency is insensitive to the duration of the experiment. The primary factor controlling the atmospheric uptake efficiency is the vertical distribution of the enhanced biological production and export. Iron fertilization at the surface tends to induce production anomalies primarily near the surface, leading to high efficiencies. In contrast, mechanisms that induce deep production anomalies (e.g. altered light availability tend to have a low uptake efficiency, since most of the removed DIC is replaced by lateral and vertical transport and mixing. Despite high atmospheric uptake efficiencies, patch-scale iron fertilization of the ocean's biological pump tends to remove little CO2 from the atmosphere over the decadal timescale considered here.

  17. The impact on atmospheric CO2 of iron fertilization induced changes in the ocean's biological pump

    Science.gov (United States)

    Jin, X.; Gruber, N.; Frenzel, H.; Doney, S. C.; McWilliams, J. C.

    2008-03-01

    Using numerical simulations, we quantify the impact of changes in the ocean's biological pump on the air-sea balance of CO2 by fertilizing a small surface patch in the high-nutrient, low-chlorophyll region of the eastern tropical Pacific with iron. Decade-long fertilization experiments are conducted in a basin-scale, eddy-permitting coupled physical/biogeochemical/ecological model. In contrast to previous studies, we find that most of the dissolved inorganic carbon (DIC) removed from the euphotic zone by the enhanced biological export is replaced by uptake of CO2 from the atmosphere. Atmospheric uptake efficiencies, the ratio of the perturbation in air-sea CO2 flux to the perturbation in export flux across 100 m, integrated over 10 years, are 0.75 to 0.93 in our patch size-scale experiments. The atmospheric uptake efficiency is insensitive to the duration of the experiment. The primary factor controlling the atmospheric uptake efficiency is the vertical distribution of the enhanced biological production and export. Iron fertilization at the surface tends to induce production anomalies primarily near the surface, leading to high efficiencies. In contrast, mechanisms that induce deep production anomalies (e.g. altered light availability) tend to have a low uptake efficiency, since most of the removed DIC is replaced by lateral and vertical transport and mixing. Despite high atmospheric uptake efficiencies, patch-scale iron fertilization of the ocean's biological pump tends to remove little CO2 from the atmosphere over the decadal timescale considered here.

  18. Upper Triassic limestones from the northern part of Japan: new insights on the Panthalassa Ocean and Hokkaido Island

    Science.gov (United States)

    Peyrotty, Giovan; Peybernes, Camille; Ueda, Hayato; Martini, Rossana

    2017-04-01

    In comparison with the well-known Tethyan domain, Upper Triassic limestones from the Panthalassa Ocean are still poorly known. However, these carbonates represent a unique opportunity to have a more accurate view of the Panthalassa Ocean during the Triassic. Their study will allow comparison and correlation of biotic assemblages, biostratigraphy, diagenesis, and depositional settings of different Triassic localities from Tethyan and Panthalassic domains. Moreover, investigation of these carbonates will provide data for taxonomic revisions and helps to better constrain palaeobiogeographic models. One of the best targets for the study of these carbonates is Hokkaido Island (north of Japan). Indeed, this island is a part of the South-North continuity of Jurassic to Paleogene accretionary complexes, going from the Philippines to Sakhalin Island (Far East Russia). Jurassic and Cretaceous accretionary complexes of Japan and Philippines contain Triassic mid-oceanic seamount carbonates from the western Panthalassa Ocean (Onoue & Sano, 2007; Kiessling & Flügel, 2000). They have been accreted either as isolated limestone slabs or as clasts and boulders, and are associated with mudstones, cherts, breccias and basaltic rocks. Two major tectonic units forming Hokkaido Island and containing Triassic limestones have been accurately explored and extensively sampled: the Oshima Belt (west Hokkaido) a Jurassic accretionary complex, and the Cretaceous Sorachi-Yezo Belt (central Hokkaido). The Sorachi-Yezo Belt is composed of Cretaceous accretionary complexes in the east and of Cretaceous clastic basin sediments deposited on a Jurassic basement in the west (Ueda, 2016), both containing Triassic limestones. The origin of this belt is still matter of debate especially because of its western part which is not in continuity with any other accretionary complex known in the other islands of Japan and also due to the lack of data in this region. One of the main goals of this study is to

  19. Biological response to millennial variability of dust and nutrient supply in the Subantarctic South Atlantic Ocean.

    Science.gov (United States)

    Anderson, Robert F; Barker, Stephen; Fleisher, Martin; Gersonde, Rainer; Goldstein, Steven L; Kuhn, Gerhard; Mortyn, P Graham; Pahnke, Katharina; Sachs, Julian P

    2014-07-13

    Fluxes of lithogenic material and fluxes of three palaeo-productivity proxies (organic carbon, biogenic opal and alkenones) over the past 100,000 years were determined using the (230)Th-normalization method in three sediment cores from the Subantarctic South Atlantic Ocean. Features in the lithogenic flux record of each core correspond to similar features in the record of dust deposition in the EPICA Dome C ice core. Biogenic fluxes correlate with lithogenic fluxes in each sediment core. Our preferred interpretation is that South American dust, most probably from Patagonia, constitutes a major source of lithogenic material in Subantarctic South Atlantic sediments, and that past biological productivity in this region responded to variability in the supply of dust, probably due to biologically available iron carried by the dust. Greater nutrient supply as well as greater nutrient utilization (stimulated by dust) contributed to Subantarctic productivity during cold periods, in contrast to the region south of the Antarctic Polar Front (APF), where reduced nutrient supply during cold periods was the principal factor limiting productivity. The anti-phased patterns of productivity on opposite sides of the APF point to shifts in the physical supply of nutrients and to dust as cofactors regulating productivity in the Southern Ocean. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

  20. Molecular Diversity of Sea Spray Aerosol Particles: Impact of Ocean Biology on Particle Composition and Hygroscopicity

    Energy Technology Data Exchange (ETDEWEB)

    Cochran, Richard E.; Laskina, Olga; Trueblood, Jonathan; Estillore, Armando D.; Morris, Holly S.; Jayarathne, Thilina; Sultana, Camile M.; Lee, Christopher; Lin, Peng; Laskin, Julia; Laskin, Alexander; Dowling, Jackie; Qin, Zhen; Cappa, Christopher; Bertram, Timothy; Tivanski, Alexei V.; Stone, Elizabeth; Prather, Kimberly; Grassian, Vicki H.

    2017-05-01

    The impact of sea spray aerosol (SSA) on climate depends on the size and chemical composition of individual particles that make-up the total SSA ensemble. While the organic fraction of SSA has been characterized from a bulk perspective, there remains a lack of understanding as to the composition of individual particles within the SSA ensemble. To better understand the molecular components within SSA particles and how SSA composition changes with ocean biology, simultaneous measurements of seawater and SSA were made during a month-long mesocosm experiment performed in an ocean-atmosphere facility. Herein, we deconvolute the composition of freshly emitted SSA devoid of anthropogenic and terrestrial influences by characterizing classes of organic compounds as well as specific molecules within individual SSA particles. Analysis of SSA particles show that the diversity of molecules within the organic fraction varies between two size fractions (submicron and supermicron) with contributions from fatty acids, monosaccharides, polysaccharides and siliceous material. Significant changes in the distribution of these compounds within individual particles are observed to coincide with the rise and fall of phytoplankton and bacterial populations within the seawater. Furthermore, water uptake is impacted as shown by hygroscopicity measurements of model systems composed of representative organic compounds. Thus, the how changes in the hygroscopic growth of SSA evolves with composition can be elucidated. Overall, this study provides an important connection between biological processes that control the composition of seawater and changes in single particle composition which will enhances our ability to predict the impact of SSA on climate.

  1. Electrical conductivity of partially-molten olivine aggregate and melt interconnectivity in the oceanic upper mantle

    Science.gov (United States)

    Laumonier, Mickael; Frost, Dan; Farla, Robert; Katsura, Tomoo; Marquardt, Katharina

    2016-04-01

    A consistent explanation for mantle geophysical anomalies such as the Lithosphere-Astenosphere Boundary (LAB) relies on the existence of little amount of melt trapped in the solid peridotite. Mathematical models have been used to assess the melt fraction possibly lying at mantle depths, but they have not been experimentally checked at low melt fraction (Lanzarote, Canary Islands, Spain) containing various amount of basaltic (MORB-like composition) melt (0 to 100%) at upper mantle conditions. We used the MAVO 6-ram press (BGI) combined with a Solartron gain phase analyser to acquire the electrical resistance of the sample at pressure of 1.5 GPa and temperature up to 1400°C. The results show the increase of the electrical conductivity with the temperature following an Arrhenius law, and with the melt fraction, but the effect of pressure between 1.5 and 3.0 GPa was found negligible at a melt fraction of 0.5 vol.%. The conductivity of a partially molten aggregate fits the modified Archie's law from 0.5 to 100 vol.%. At melt fractions of 0.25, 0.15 and 0.0 vol.%, the EC value deviates from the trend previously defined, suggesting that the melt is no longer fully interconnected through the sample, also supported by chemical mapping. Our results extend the previous results obtained on mixed system between 1 and 10% of melt. Since the melt appears fully interconnected down to very low melt fraction (0.5 vol.%), we conclude that (i) only 0.5 to 1 vol.% of melt is enough to explain the LAB EC anomaly, lower than previously determined; and (ii) deformation is not mandatory to enhance electrical conductivity of melt-bearing mantle rocks.

  2. Water content within the oceanic upper mantle of the Southwest Indian Ridge: a FTIR analysis of orthopyroxenes of abyssal peridotites

    Science.gov (United States)

    Li, W.; Li, H.; Tao, C.; Jin, Z.

    2013-12-01

    Water can be present in the oceanic upper mantle as structural OH in nominally anhydrous minerals. Such water has marked effects on manlte melting and rheology properties. However, the water content of MORB source is mainly inferred from MORB glass data that the water budget of oceanic upper mantle is poorly constrained. Here we present water analysis of peridotites from different sites on the Southwest Indian Ridge. The mineral assemblages of these peridotites are olivine, orthopyroxene, clinopyroxene and spinel. As the peridotites have been serpentinized to different degrees, only water contents in orthopyroxnene can be better determined by FTIR spectrometry. The IR absorption bands of all measured orthopyroxenes can be devided into four different groups: (1)3562-3596 cm-1, (2)3515-3520 cm-1, (3)3415-3420 cm-1, (4)3200-3210 cm-1. The positions of these absorption bands are in good agreement with perivious reports. Hydrogen profile measurements performed on larger opx grains in each suite of samples show no obvious variations between core and rims regions, indicating that diffusion of H in orthopyroxene is insignificant. Preliminary measured water contents of orthopyroxene differ by up to one order of magnitude. Opx water contents (80-220 ppm) of most samples are within the range of those found in mantle xenoliths of contentinal settings [1]. Opx water contents of one sample (VM-21V-S9-D5-2: 38-64 ppm) are similar to those from Gakkel Ridge abyssal peridotites (25-60 ppm) [2] but higher than those from Mid-Atlantic Ridge ODP-Leg 209(~15 ppm) [3]. Two other samples show high water concentrations (VM-19ΙΙΙ-S3-TVG2-4: 260-275 ppm, Wb-18-b: 190-265 ppm) which compare well with those from Mid-Atlantic Ridge ODP-Leg 153(160-270 ppm) [4]. Most opx water contents decrease with increasing depletion degree (spl Cr#) consistent with an incompatible behavior of water during partial melting. Recalculated bulk water contents (27-117 ppm) of these peridotites overlap

  3. Decomposing the effects of ocean warming on chlorophyll a concentrations into physically and biologically driven contributions

    International Nuclear Information System (INIS)

    Olonscheck, D; Hofmann, M; Schellnhuber, H J; Worm, B

    2013-01-01

    Recently compiled observational data suggest a substantial decline in the global median chlorophyll a concentration over the 20th century, a trend that appears to be linked to ocean warming. Several modelling studies have considered changes in the ocean’s physical structure as a possible cause, while experimental work supports a biological mechanism, namely an observed increase in zooplankton grazing rate that outpaces phytoplankton production at higher temperatures. Here, we present transient simulations derived from a coupled ocean general circulation and carbon cycle model forced by atmospheric fields under unabated anthropogenic global warming (IPCC SRES A1FI scenario). The simulations account for both physical and biological mechanisms, and can reproduce about one quarter of the observed chlorophyll a decline during the 20th century, when using realistically parameterized temperature sensitivity of zooplankton metabolism (Q 10 between 2 and 4) and phytoplankton growth (Q 10 ∼ 1.9). Therefore, we have employed and re-calibrated the standard ecosystem model which assumes a lower temperature sensitivity of zooplankton grazing (Q 10 = 1.1049) by re-scaling phytoplankton growth rates and zooplankton grazing rates. Our model projects a global chlorophyll a decline of >50% by the end of the 21st century. While phytoplankton abundance and chlorophyll a experience pronounced negative effects, primary production and zooplankton concentrations are less sensitive to ocean warming. Although changes in physical structure play an important role, much of the simulated change in chlorophyll a and productivity is related to the uneven temperature sensitivity of the marine ecosystem. (letter)

  4. The size distribution of marine atmospheric aerosol with regard to primary biological aerosol particles over the South Atlantic Ocean

    Science.gov (United States)

    Matthias-Maser, Sabine; Brinkmann, Jutta; Schneider, Wilhelm

    The marine atmosphere is characterized by particles which originate from the ocean and by those which reached the air by advection from the continent. The bubble-burst mechanism produces both sea salt as well as biological particles. The following article describes the determination of the size distribution of marine aerosol particles with special emphasis on the biological particles. Th data were obtained on three cruises with the German Research Vessel "METEOR" crossing the South Atlantic Ocean. The measurements showed that biological particles amount to 17% in number and 10% in volume concentration. Another type of particle became obvious in the marine atmosphere, the biologically contaminated particle, i.e. particles which consist partly (approximately up to one-third) of biological matter. Their concentration in the evaluated size class ( r>2 μm) is higher than the concentration of the pure biological particles. The concentrations vary over about one to two orders of magnitude during all cruises.

  5. Physical and biological data collected with a towed vehicle to support studies in the Southern Oceans, January - February 1998 (NODC Accession 0000947)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Physical and biological data were collected using fluorometer and CTD casts from the ROGER REVELLE in the Southern Oceans from 12 January 1998 to 03 February 1998....

  6. Biological profile and meteorological data collected by bottle and net in the Western Pacific Ocean from 6/5/1973 - 11/7/1973 (NODC Accession 0000151)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Biological profile and meteorological data were collected using bottle and net casts from the RYOFU MARU in the Northwest / Southwest Pacific Ocean. Data were...

  7. Estimation of the drag coefficient from the upper ocean response to a hurricane: A variational data assimilation approach

    KAUST Repository

    Zedler, Sarah

    2013-08-01

    We seek to determine whether a small number of measurements of upper ocean temperature and currents can be used to make estimates of the drag coefficient that have a smaller range of uncertainty than previously found. We adopt a numerical approach in an inverse problem setup using an ocean model and its adjoint, to assimilate data and to adjust the drag coefficient parameterization (here the free parameter) with wind speed that corresponds to the minimum of a model minus data misfit or cost function. Pseudo data are generated from a reference forward simulation, and are perturbed with different levels of Gaussian distributed noise. It is found that it is necessary to assimilate both surface current speed and temperature data to obtain improvement over previous estimates of the drag coefficient. When data is assimilated without any smoothing or constraints on the solution, the drag coefficient is overestimated at low wind speeds and there are unrealistic, high frequency oscillations in the adjusted drag coefficient curve. When second derivatives of the drag coefficient curve are penalized and the solution is constrained to experimental values at low wind speeds, the adjusted drag coefficient is within 10% of its target value. This result is robust to the addition of realistic random noise meant to represent turbulence due to the presence of mesoscale background features in the assimilated data, or to the wind speed time series to model its unsteady and gusty character. When an eddy is added to the background flow field in both the initial condition and the assimilated data time series, the target and adjusted drag coefficient are within 10% of one another, regardless of whether random noise is added to the assimilated data. However, when the eddy is present in the assimilated data but is not in the initial conditions, the drag coefficient is overestimated by as much as 30%. This carries the implication that when real data is assimilated, care needs to be taken in

  8. Combining Satellite and in Situ Data with Models to Support Climate Data Records in Ocean Biology

    Science.gov (United States)

    Gregg, Watson

    2011-01-01

    by solar zenith angle requirements and obscuration from clouds and aerosols. Combined with in situ dataenhanced satellite data, the model is forced into consistency using data assimilation. This approach eliminates sampling discrepancies from satellites. Combining the reduced differences of satellite data sets using in situ data, and the removal of sampling biases using data assimilation, we generate consistent data records of ocean color. These data records can support investigations of long-term effects of climate change on ocean biology over multiple satellites, and can improve the consistency of future satellite data sets.

  9. Observed Seasonal Variations of the Upper Ocean Structure and Air-Sea Interactions in the Andaman Sea

    Science.gov (United States)

    Liu, Yanliang; Li, Kuiping; Ning, Chunlin; Yang, Yang; Wang, Haiyuan; Liu, Jianjun; Skhokiattiwong, Somkiat; Yu, Weidong

    2018-02-01

    The Andaman Sea (AS) is a poorly observed basin, where even the fundamental physical characteristics have not been fully documented. Here the seasonal variations of the upper ocean structure and the air-sea interactions in the central AS were studied using a moored surface buoy. The seasonal double-peak pattern of the sea surface temperature (SST) was identified with the corresponding mixed layer variations. Compared with the buoys in the Bay of Bengal (BOB), the thermal stratification in the central AS was much stronger in the winter to spring, when a shallower isothermal layer and a thinner barrier layer were sustained. The temperature inversion was strongest from June to July because of substantial surface heat loss and subsurface prewarming. The heat budget analysis of the mixed layer showed that the net surface heat fluxes dominated the seasonal SST cycle. Vertical entrainment was significant from April to July. It had a strong cooling effect from April to May and a striking warming effect from June to July. A sensitivity experiment highlighted the importance of salinity. The AS warmer surface water in the winter was associated with weak heat loss caused by weaker longwave radiation and latent heat losses. However, the AS latent heat loss was larger than the BOB in summer due to its lower relative humidity.

  10. Macroscopic sessile tumor architecture is a pathologic feature of biologically aggressive upper tract urothelial carcinoma.

    Science.gov (United States)

    Fritsche, Hans-Martin; Novara, Giacomo; Burger, Maximilian; Gupta, Amit; Matsumoto, Kazumasa; Kassouf, Wassim; Sircar, Kanishka; Zattoni, Filiberto; Walton, Tom; Tritschler, Stefan; Baba, Shiro; Bastian, Patrick J; Martínez-Salamanca, Juan I; Seitz, Christian; Otto, Wolfgang; Wieland, Wolf Ferdinand; Karakiewicz, Pierre I; Ficarra, Vincenzo; Hartmann, Arndt; Shariat, Shahrokh F

    2012-09-01

    Macroscopic sessile tumor architecture was associated with adverse outcomes after radical nephroureterectomy (RNU) for upper tract urothelial carcinoma (UTUC). Before inclusion in daily clinical decision-making, the prognostic value of tumor architecture needs to be validated in an independent, external dataset. We tested whether macroscopic tumor architecture improves outcome prediction in an international cohort of patients. We retrospectively studied 754 patients treated with RNU for UTUC without neoadjuvant chemotherapy at 9 centers located in Asia, Canada, and Europe. Tumor architecture was macroscopically categorized as either papillary or sessile. Univariable and multivariable Cox regression analyses were used to address recurrence-free (RFS) and cancer-specific survival (CSS) estimates. Macroscopic sessile architecture was present in 20% of the patients. Its prevalence increased with advancing pathologic stage and it was significantly associated with established features of biologically aggressive UTUC, such as tumor grade, lymph node metastasis, lymphovascular invasion, and concomitant CIS (all P values architecture were 85% and 90%, compared with 58% and 66% for those with macroscopic sessile architecture, respectively (P values architecture was an independent predictor of both RFS (hazard ratio {HR}: 1.5; P = 0.036) and CSS (HR: 1.5; P = 0.03). We confirmed the independent prognostic value of macroscopic tumor architecture in a large, independent, multicenter UTUC cohort. It should be reported in every pathology report and included in post-RNU predictive models in order to refine current clinical decision making regarding follow-up protocol and adjuvant therapy. Copyright © 2012 Elsevier Inc. All rights reserved.

  11. Age and microfacies of oceanic Upper Triassic radiolarite components from the Middle Jurassic ophiolitic mélange in the Zlatibor Mountains (Inner Dinarides, Serbia and their provenance

    Directory of Open Access Journals (Sweden)

    Gawlick Hans-Jürgen

    2017-08-01

    Full Text Available Oceanic radiolarite components from the Middle Jurassic ophiolitic mélange between Trnava and Rožanstvo in the Zlatibor Mountains (Dinaridic Ophiolite Belt west of the Drina–Ivanjica unit yield Late Triassic radiolarian ages. The microfacies characteristics of the radiolarites show pure ribbon radiolarites without crinoids or thin-shelled bivalves. Beside their age and the preservation of the radiolarians this points to a deposition of the radiolarites on top of the oceanic crust of the Neo-Tethys, which started to open in the Late Anisian. South of the study area the ophiolitic mélange (Gostilje–Ljubiš–Visoka–Radoševo mélange contains a mixture of blocks of 1 oceanic crust, 2 Middle and Upper Triassic ribbon radiolarites, and 3 open marine limestones from the continental slope. On the basis of this composition we can conclude that the Upper Triassic radiolarite clasts derive either from 1 the younger parts of the sedimentary succession above the oceanic crust near the continental slope or, more convincingly 2 the sedimentary cover of ophiolites in a higher nappe position, because Upper Triassic ribbon radiolarites are only expected in more distal oceanic areas. The ophiolitic mélange in the study area overlies different carbonate blocks of an underlying carbonate-clastic mélange (Sirogojno mélange. We date and describe three localities with different Upper Triassic radiolarite clasts in a mélange, which occurs A on top of Upper Triassic fore-reef to reefal limestones (Dachstein reef, B between an Upper Triassic reefal limestone block and a Lower Carnian reef limestone (Wetterstein reef, and C in fissures of an Upper Triassic lagoonal to back-reef limestone (Dachstein lagoon. The sedimentary features point to a sedimentary and not to a tectonic emplacement of the ophiolitic mélange (= sedimentary mélange filling the rough topography of the topmost carbonate-clastic mélange below. The block spectrum of the underlying and

  12. Age and microfacies of oceanic Upper Triassic radiolarite components from the Middle Jurassic ophiolitic mélange in the Zlatibor Mountains (Inner Dinarides, Serbia) and their provenance

    Science.gov (United States)

    Gawlick, Hans-Jürgen; Djerić, Nevenka; Missoni, Sigrid; Bragin, Nikita Yu.; Lein, Richard; Sudar, Milan; Jovanović, Divna

    2017-08-01

    Oceanic radiolarite components from the Middle Jurassic ophiolitic mélange between Trnava and Rožanstvo in the Zlatibor Mountains (Dinaridic Ophiolite Belt) west of the Drina-Ivanjica unit yield Late Triassic radiolarian ages. The microfacies characteristics of the radiolarites show pure ribbon radiolarites without crinoids or thin-shelled bivalves. Beside their age and the preservation of the radiolarians this points to a deposition of the radiolarites on top of the oceanic crust of the Neo-Tethys, which started to open in the Late Anisian. South of the study area the ophiolitic mélange (Gostilje-Ljubiš-Visoka-Radoševo mélange) contains a mixture of blocks of 1) oceanic crust, 2) Middle and Upper Triassic ribbon radiolarites, and 3) open marine limestones from the continental slope. On the basis of this composition we can conclude that the Upper Triassic radiolarite clasts derive either from 1) the younger parts of the sedimentary succession above the oceanic crust near the continental slope or, more convincingly 2) the sedimentary cover of ophiolites in a higher nappe position, because Upper Triassic ribbon radiolarites are only expected in more distal oceanic areas. The ophiolitic mélange in the study area overlies different carbonate blocks of an underlying carbonate-clastic mélange (Sirogojno mélange). We date and describe three localities with different Upper Triassic radiolarite clasts in a mélange, which occurs A) on top of Upper Triassic fore-reef to reefal limestones (Dachstein reef), B) between an Upper Triassic reefal limestone block and a Lower Carnian reef limestone (Wetterstein reef), and C) in fissures of an Upper Triassic lagoonal to back-reef limestone (Dachstein lagoon). The sedimentary features point to a sedimentary and not to a tectonic emplacement of the ophiolitic mélange (= sedimentary mélange) filling the rough topography of the topmost carbonate-clastic mélange below. The block spectrum of the underlying and slightly older

  13. Trends in Upper-Level Cloud Cover and Surface Divergence Over the Tropical Indo-Pacific Ocean Between 1952 And 1997

    Science.gov (United States)

    Norris, Joel R.

    2005-01-01

    This study investigated the spatial pattern of linear trends in surface-observed upper-level (combined mid-level and High-level) cloud cover, precipitation, and surface divergence over the tropical Indo-Pacific Ocean during 1952-1957. Cloud values were obtained from the Extended Edited Cloud Report Archive (EECRA), precipitation values were obtained from the Hulme/Climate Research Unit Data Set, and surface divergence was alternatively calculated from wind reported Comprehensive Ocean-Atmosphere Data Set and from Smith and Reynolds Extended Reconstructed sea level pressure data.

  14. The dynamic ocean biological pump: Insights from a global compilation of particulate organic carbon, CaCO3, and opal concentration profiles from the mesopelagic

    Science.gov (United States)

    Lam, Phoebe J.; Doney, Scott C.; Bishop, James K. B.

    2011-09-01

    We have compiled a global data set of 62 open ocean profiles of particulate organic carbon (POC), CaCO3, and opal concentrations collected by large volume in situ filtration in the upper 1000 m over the last 30 years. We define concentration-based metrics for the strength (POC concentration at depth) and efficiency (attenuation of POC with depth in the mesopelagic) of the biological pump. We show that the strength and efficiency of the biological pump are dynamic and are characterized by a regime of constant and high transfer efficiency at low to moderate surface POC and a bloom regime where the height of the bloom is characterized by a weak deep biological pump and low transfer efficiency. The variability in POC attenuation length scale manifests in a clear decoupling between the strength of the shallow biological pump (e.g., POC at the export depth) and the strength of the deep biological pump (POC at 500 m). We suggest that the paradigm of diatom-driven export production is driven by a too restrictive perspective on upper mesopelagic dynamics. Indeed, our full mesopelagic analysis suggests that large, blooming diatoms have low transfer efficiency and thus may not export substantially to depth; rather, our analysis suggests that ecosystems characterized by smaller cells and moderately high %CaCO3 have a high mesopelagic transfer efficiency and can have higher POC concentrations in the deep mesopelagic even with relatively low surface or near-surface POC. This has negative implications for the carbon sequestration prospects of deliberate iron fertilization.

  15. Biology and air–sea gas exchange controls on the distribution of carbon isotope ratios (δ13C in the ocean

    Directory of Open Access Journals (Sweden)

    A. Schmittner

    2013-09-01

    Full Text Available Analysis of observations and sensitivity experiments with a new three-dimensional global model of stable carbon isotope cycling elucidate processes that control the distribution of δ13C of dissolved inorganic carbon (DIC in the contemporary and preindustrial ocean. Biological fractionation and the sinking of isotopically light δ13C organic matter from the surface into the interior ocean leads to low δ13CDIC values at depths and in high latitude surface waters and high values in the upper ocean at low latitudes with maxima in the subtropics. Air–sea gas exchange has two effects. First, it acts to reduce the spatial gradients created by biology. Second, the associated temperature-dependent fractionation tends to increase (decrease δ13CDIC values of colder (warmer water, which generates gradients that oppose those arising from biology. Our model results suggest that both effects are similarly important in influencing surface and interior δ13CDIC distributions. However, since air–sea gas exchange is slow in the modern ocean, the biological effect dominates spatial δ13CDIC gradients both in the interior and at the surface, in contrast to conclusions from some previous studies. Calcium carbonate cycling, pH dependency of fractionation during air–sea gas exchange, and kinetic fractionation have minor effects on δ13CDIC. Accumulation of isotopically light carbon from anthropogenic fossil fuel burning has decreased the spatial variability of surface and deep δ13CDIC since the industrial revolution in our model simulations. Analysis of a new synthesis of δ13CDIC measurements from years 1990 to 2005 is used to quantify preformed and remineralized contributions as well as the effects of biology and air–sea gas exchange. The model reproduces major features of the observed large-scale distribution of δ13CDIC as well as the individual contributions and effects. Residual misfits are documented and analyzed. Simulated surface and subsurface

  16. Restricted Inter-ocean Exchange and Attenuated Biological Export Caused Enhanced Carbonate Preservation in the PETM Ocean

    Science.gov (United States)

    Luo, Y.; Boudreau, B. P.; Dickens, G. R.; Sluijs, A.; Middelburg, J. J.

    2015-12-01

    Carbon dioxide (CO2) release during the Paleocene-Eocene Thermal Maximum (PETM, 55.8 Myr BP) acidified the oceans, causing a decrease in calcium carbonate (CaCO3) preservation. During the subsequent recovery from this acidification, the sediment CaCO3 content came to exceed pre-PETM values, known as over-deepening or over-shooting. Past studies claim to explain these trends, but have failed to reproduce quantitatively the time series of CaCO3 preservation. We employ a simple biogeochemical model to recreate the CaCO3 records preserved at Walvis Ridge of the Atlantic Ocean. Replication of the observed changes, both shallowing and the subsequent over-deepening, requires two conditions not previously considered: (1) limited deep-water exchange between the Indo-Atlantic and Pacific oceans and (2) a ~50% reduction in the export of CaCO3 to the deep sea during acidification. Contrary to past theories that attributed over-deepening to increased riverine alkalinity input, we find that over-deepening is an emergent property, generated at constant riverine input when attenuation of CaCO3 export causes an unbalanced alkalinity input to the deep oceans (alkalinization) and the development of deep super-saturation. Restoration of CaCO3 export, particularly in the super-saturated deep Indo-Atlantic ocean, later in the PETM leads to greater accumulation of carbonates, ergo over-shooting, which returns the ocean to pre-PETM conditions over a time scale greater than 200 kyr. While this feedback between carbonate export and the riverine input has not previously been considered, it appears to constitute an important modification of the classic carbonate compensation concept used to explain oceanic response to acidification.

  17. Learning Cell Biology as a Team: A Project-Based Approach to Upper-Division Cell Biology

    Science.gov (United States)

    Wright, Robin; Boggs, James

    2002-01-01

    To help students develop successful strategies for learning how to learn and communicate complex information in cell biology, we developed a quarter-long cell biology class based on team projects. Each team researches a particular human disease and presents information about the cellular structure or process affected by the disease, the cellular…

  18. Biological and physical controls in the Southern Ocean on past millennial-scale atmospheric CO2 changes.

    Science.gov (United States)

    Gottschalk, Julia; Skinner, Luke C; Lippold, Jörg; Vogel, Hendrik; Frank, Norbert; Jaccard, Samuel L; Waelbroeck, Claire

    2016-05-17

    Millennial-scale climate changes during the last glacial period and deglaciation were accompanied by rapid changes in atmospheric CO2 that remain unexplained. While the role of the Southern Ocean as a 'control valve' on ocean-atmosphere CO2 exchange has been emphasized, the exact nature of this role, in particular the relative contributions of physical (for example, ocean dynamics and air-sea gas exchange) versus biological processes (for example, export productivity), remains poorly constrained. Here we combine reconstructions of bottom-water [O2], export production and (14)C ventilation ages in the sub-Antarctic Atlantic, and show that atmospheric CO2 pulses during the last glacial- and deglacial periods were consistently accompanied by decreases in the biological export of carbon and increases in deep-ocean ventilation via southern-sourced water masses. These findings demonstrate how the Southern Ocean's 'organic carbon pump' has exerted a tight control on atmospheric CO2, and thus global climate, specifically via a synergy of both physical and biological processes.

  19. The effect of Coriolis-Stokes forcing on upper ocean circulation in a two-way coupled wave-current model

    Institute of Scientific and Technical Information of China (English)

    DENG Zeng'an; XIE Li'an; HAN Guijun; ZHANG Xuefeng; WU Kejian

    2012-01-01

    We investigated the Stokes drift-driven ocean currents and Stokes drift-induced wind energy input into the upper ocean using a two-way coupled wave-current modeling system that consists of the Princeton Ocean Model generalized coordinate system (POMgcs),Simulating WAves Nearshore (SWAN) wave model,and the Model Coupling Toolkit (MCT).The Coriolis-Stokes forcing (CSF) computed using the wave parameters from SWAN was incorporated with the momentum equation of POMgcs as the core coupling process.Experimental results in an idealized setting show that under the steady state,the scale of the speed of CSF-driven current was 0.001 m/s and the maximum reached 0.02 rn/s.The Stokes drift-induced energy rate input into the model ocean was estimated to be 28.5 GW,taking 14% of the direct wind energy rate input.Considering the Stokes drift effects,the total mechanical energy rate input was increased by approximately 14%,which highlights the importance of CSF in modulating the upper ocean circulation.The actual run conducted in Taiwan Adjacent Sea (TAS) shows that:1) CSF-based wave-current coupling has an impact on ocean surface currents,which is related to the activities of monsoon winds; 2) wave-current coupling plays a significant role in a place where strong eddies present and tends to intensify the eddy's vorticity; 3) wave-current coupling affects the volume transport of the Taiwan Strait (TS) throughflow in a nontrivial degree,3.75% on average.

  20. Lateral variation in upper mantle temperature and composition beneath mid-ocean ridges inferred from shear-wave propagation, geoid, and bathymetry. Ph.D. Thesis

    Science.gov (United States)

    Sheehan, Anne Francis

    1991-01-01

    Resolution of both the extent and mechanism of lateral heterogeneity in the upper mantle constraints the nature and scales of mantle convection. Oceanic regions are of particular interest as they are likely to provide the closest glimpse at the patterns of temperature anomalies and convective flow in the upper mantle because of their young age and simple crustal structure relative to continental regions. Lateral variations were determined in the seismic velocity and attenuation structure of the lithosphere and astenosphere beneath the oceans, and these seismological observations were combined with the data and theory of geoid and bathymetry anomalies in order to test and improve current models for seafloor spreading and mantle convection. Variations were determined in mantle properties on a scale of about 1000 km, comparable to the thickness of the upper mantle. Seismic velocity, geoid, and bathymetry anomalies are all sensitive to variations in upper mantle density, and inversions were formulated to combine quantitatively these different data and to search for a common origin. Variations in mantle density can be either of thermal or compositional origin and are related to mantle convection or differentiation.

  1. Chemical and biological impacts of ocean acidification along the west coast of North America

    Science.gov (United States)

    Feely, Richard A.; Alin, Simone R.; Carter, Brendan; Bednaršek, Nina; Hales, Burke; Chan, Francis; Hill, Tessa M.; Gaylord, Brian; Sanford, Eric; Byrne, Robert H.; Sabine, Christopher L.; Greeley, Dana; Juranek, Lauren

    2016-12-01

    The continental shelf region off the west coast of North America is seasonally exposed to water with a low aragonite saturation state by coastal upwelling of CO2-rich waters. To date, the spatial and temporal distribution of anthropogenic CO2 (Canth) within the CO2-rich waters is largely unknown. Here we adapt the multiple linear regression approach to utilize the GO-SHIP Repeat Hydrography data from the northeast Pacific to establish an annually updated relationship between Canth and potential density. This relationship was then used with the NOAA Ocean Acidification Program West Coast Ocean Acidification (WCOA) cruise data sets from 2007, 2011, 2012, and 2013 to determine the spatial variations of Canth in the upwelled water. Our results show large spatial differences in Canth in surface waters along the coast, with the lowest values (37-55 μmol kg-1) in strong upwelling regions off southern Oregon and northern California and higher values (51-63 μmol kg-1) to the north and south of this region. Coastal dissolved inorganic carbon concentrations are also elevated due to a natural remineralized component (Cbio), which represents carbon accumulated through net respiration in the seawater that has not yet degassed to the atmosphere. Average surface Canth is almost twice the surface remineralized component. In contrast, Canth is only about one third and one fifth of the remineralized component at 50 m and 100 m depth, respectively. Uptake of Canth has caused the aragonite saturation horizon to shoal by approximately 30-50 m since the preindustrial period so that undersaturated waters are well within the regions of the continental shelf that affect the shell dissolution of living pteropods. Our data show that the most severe biological impacts occur in the nearshore waters, where corrosive waters are closest to the surface. Since the pre-industrial times, pteropod shell dissolution has, on average, increased approximately 19-26% in both nearshore and offshore waters.

  2. Experimental strategies to assess the biological ramifications of multiple drivers of global ocean change-A review.

    Science.gov (United States)

    Boyd, Philip W; Collins, Sinead; Dupont, Sam; Fabricius, Katharina; Gattuso, Jean-Pierre; Havenhand, Jonathan; Hutchins, David A; Riebesell, Ulf; Rintoul, Max S; Vichi, Marcello; Biswas, Haimanti; Ciotti, Aurea; Gao, Kunshan; Gehlen, Marion; Hurd, Catriona L; Kurihara, Haruko; McGraw, Christina M; Navarro, Jorge M; Nilsson, Göran E; Passow, Uta; Pörtner, Hans-Otto

    2018-06-01

    Marine life is controlled by multiple physical and chemical drivers and by diverse ecological processes. Many of these oceanic properties are being altered by climate change and other anthropogenic pressures. Hence, identifying the influences of multifaceted ocean change, from local to global scales, is a complex task. To guide policy-making and make projections of the future of the marine biosphere, it is essential to understand biological responses at physiological, evolutionary and ecological levels. Here, we contrast and compare different approaches to multiple driver experiments that aim to elucidate biological responses to a complex matrix of ocean global change. We present the benefits and the challenges of each approach with a focus on marine research, and guidelines to navigate through these different categories to help identify strategies that might best address research questions in fundamental physiology, experimental evolutionary biology and community ecology. Our review reveals that the field of multiple driver research is being pulled in complementary directions: the need for reductionist approaches to obtain process-oriented, mechanistic understanding and a requirement to quantify responses to projected future scenarios of ocean change. We conclude the review with recommendations on how best to align different experimental approaches to contribute fundamental information needed for science-based policy formulation. © 2018 John Wiley & Sons Ltd.

  3. Biological nitrogen fixation in the oxygen-minimum region of the eastern tropical North Pacific ocean.

    Science.gov (United States)

    Jayakumar, Amal; Chang, Bonnie X; Widner, Brittany; Bernhardt, Peter; Mulholland, Margaret R; Ward, Bess B

    2017-10-01

    Biological nitrogen fixation (BNF) was investigated above and within the oxygen-depleted waters of the oxygen-minimum zone of the Eastern Tropical North Pacific Ocean. BNF rates were estimated using an isotope tracer method that overcame the uncertainty of the conventional bubble method by directly measuring the tracer enrichment during the incubations. Highest rates of BNF (~4 nM day -1 ) occurred in coastal surface waters and lowest detectable rates (~0.2 nM day -1 ) were found in the anoxic region of offshore stations. BNF was not detectable in most samples from oxygen-depleted waters. The composition of the N 2 -fixing assemblage was investigated by sequencing of nifH genes. The diazotrophic assemblage in surface waters contained mainly Proteobacterial sequences (Cluster I nifH), while both Proteobacterial sequences and sequences with high identities to those of anaerobic microbes characterized as Clusters III and IV type nifH sequences were found in the anoxic waters. Our results indicate modest input of N through BNF in oxygen-depleted zones mainly due to the activity of proteobacterial diazotrophs.

  4. Reproductive biology of the spotback skate Atlantoraja castelnaui in the south-west Atlantic Ocean.

    Science.gov (United States)

    Colonello, J C; García, M L; Lasta, C A; Menni, R C

    2012-06-01

    This study provides information on the reproduction of spotback skate Atlantoraja castelnaui. A total of 232 individuals (119 females and 113 males) were obtained from surveys carried out between 2003 and 2006, from the south-west Atlantic Ocean, between 34 and 42° S and <50 m deep; another 514 specimens (241 females and 273 males) were obtained between 2005 and 2007 from commercial fishery operations carried out in the same area and landings in the port of Mar del Plata, Argentina. Males ranged from 185 to 1250 mm total length (L(T) ) and females from 243 to 1368 mm L(T) . Length at maturity was estimated to be 980 mm for males and 1089 mm L(T) for females. Lack of variation of testis mass together with the continuous production of mature spermatocyst and spermatozoa in deferent ducts suggested that males can reproduce throughout the year. Females reproduced year-round with peaks of reproductive activity an integral part of a continuous cycle. This conclusion is corroborated by the seasonal variation of ovaries, oviducal gland and the occurrence of females with eggs in the uterus throughout the year. Results from this study indicate that A. castelnaui is very susceptible to fishery pressure. © 2012 The Authors. Journal of Fish Biology © 2012 The Fisheries Society of the British Isles.

  5. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: HABITATS (Habitat Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for endangered plants for the Upper Coast of Texas. Vector polygons in this data set represent occurrence...

  6. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: NESTS (Nest Points)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for shorebirds, diving birds, raptors, waterfowl, wading birds, terns, and gulls for the Upper Coast of...

  7. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: REPTILES (Reptile Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for sea turtles, estuarine reptiles, and terrestrial endangered species occurrences for the Upper Coast of...

  8. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: INVERT (Invertebrate Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for marine and estuarine invertebrate species for the Upper Coast of Texas. Vector polygons in this data...

  9. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: FISH (Fish Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for marine, estuarine, and freshwater fish species for the Upper Coast of Texas. Vector polygons in this...

  10. Summertime calcium carbonate undersaturation in shelf waters of the western Arctic Ocean – how biological processes exacerbate the impact of ocean acidification

    Directory of Open Access Journals (Sweden)

    N. R. Bates

    2013-08-01

    Full Text Available The Arctic Ocean accounts for only 4% of the global ocean area, but it contributes significantly to the global carbon cycle. Recent observations of seawater CO2-carbonate chemistry in shelf waters of the western Arctic Ocean, primarily in the Chukchi Sea, from 2009 to 2011 indicate that bottom waters are seasonally undersaturated with respect to calcium carbonate (CaCO3 minerals, particularly aragonite. Nearly 40% of sampled bottom waters on the shelf have saturation states less than one for aragonite (i.e., Ωaragonite 3-secreting organisms, while 80% of bottom waters present had Ωaragonite values less than 1.5. Our observations indicate seasonal reduction of saturation states (Ω for calcite (Ωcalcite and aragonite (Ωaragonite in the subsurface in the western Arctic by as much as 0.8 and 0.5, respectively. Such data indicate that bottom waters of the western Arctic shelves were already potentially corrosive for biogenic and sedimentary CaCO3 for several months each year. Seasonal changes in Ω are imparted by a variety of factors such as phytoplankton photosynthesis, respiration/remineralization of organic matter and air–sea gas exchange of CO2. Combined, these processes either increase or enhance in surface and subsurface waters, respectively. These seasonal physical and biological processes also act to mitigate or enhance the impact of Anthropocene ocean acidification (OA on Ω in surface and subsurface waters, respectively. Future monitoring of the western Arctic shelves is warranted to assess the present and future impact of ocean acidification and seasonal physico-biogeochemical processes on Ω values and Arctic marine ecosystems.

  11. Complementary constraints from carbon (13C) and nitrogen (15N) isotopes on the glacial ocean's soft-tissue biological pump

    Science.gov (United States)

    Schmittner, A.; Somes, C. J.

    2016-06-01

    A three-dimensional, process-based model of the ocean's carbon and nitrogen cycles, including 13C and 15N isotopes, is used to explore effects of idealized changes in the soft-tissue biological pump. Results are presented from one preindustrial control run (piCtrl) and six simulations of the Last Glacial Maximum (LGM) with increasing values of the spatially constant maximum phytoplankton growth rate μmax, which accelerates biological nutrient utilization mimicking iron fertilization. The default LGM simulation, without increasing μmax and with a shallower and weaker Atlantic Meridional Overturning Circulation and increased sea ice cover, leads to 280 Pg more respired organic carbon (Corg) storage in the deep ocean with respect to piCtrl. Dissolved oxygen concentrations in the colder glacial thermocline increase, which reduces water column denitrification and, with delay, nitrogen fixation, thus increasing the ocean's fixed nitrogen inventory and decreasing δ15NNO3 almost everywhere. This simulation already fits sediment reconstructions of carbon and nitrogen isotopes relatively well, but it overestimates deep ocean δ13CDIC and underestimates δ15NNO3 at high latitudes. Increasing μmax enhances Corg and lowers deep ocean δ13CDIC, improving the agreement with sediment data. In the model's Antarctic and North Pacific Oceans modest increases in μmax result in higher δ15NNO3 due to enhanced local nutrient utilization, improving the agreement with reconstructions there. Models with moderately increased μmax fit both isotope data best, whereas large increases in nutrient utilization are inconsistent with nitrogen isotopes although they still fit the carbon isotopes reasonably well. The best fitting models reproduce major features of the glacial δ13CDIC, δ15N, and oxygen reconstructions while simulating increased Corg by 510-670 Pg compared with the preindustrial ocean. These results are consistent with the idea that the soft-tissue pump was more efficient

  12. Simulation of global oceanic upper layers forced at the surface by an optimal bulk formulation derived from multi-campaign measurements.

    Science.gov (United States)

    Garric, G.; Pirani, A.; Belamari, S.; Caniaux, G.

    2006-12-01

    order to improve the air/sea interface for the future MERCATOR global ocean operational system, we have implemented the new bulk formulation developed by METEO-FRANCE (French Meteo office) in the MERCATOR 2 degree global ocean-ice coupled model (ORCA2/LIM). A single bulk formulation for the drag, temperature and moisture exchange coefficients is derived from an extended consistent database gathering 10 years of measurements issued from five experiments dedicated to air-sea fluxes estimates (SEMAPHORE, CATCH, FETCH, EQUALANT99 and POMME) in various oceanic basins (from Northern to equatorial Atlantic). The available database (ALBATROS) cover the widest range of atmospheric and oceanic conditions, from very light (0.3 m/s) to very strong (up to 29 m/s) wind speeds, and from unstable to extremely stable atmospheric boundary layer stratification. We have defined a work strategy to test this new formulation in a global oceanic context, by using this multi- campaign bulk formulation to derive air-sea fluxes from base meteorological variables produces by the ECMWF (European Centre for Medium Range and Weather Forecast) atmospheric forecast model, in order to get surface boundary conditions for ORCA2/LIM. The simulated oceanic upper layers forced at the surface by the previous air/sea interface are compared to those forced by the optimal bulk formulation. Consecutively with generally weaker transfer coefficient, the latter formulation reduces the cold bias in the equatorial Pacific and increases the too weak summer sea ice extent in Antarctica. Compared to a recent mixed layer depth (MLD) climatology, the optimal bulk formulation reduces also the too deep simulated MLDs. Comparison with in situ temperature and salinity profiles in different areas allowed us to evaluate the impact of changing the air/sea interface in the vertical structure.

  13. Final Technical Report: DOE-Biological Ocean Margins Program. Microbial Ecology of Denitrifying Bacteria in the Coastal Ocean.

    Energy Technology Data Exchange (ETDEWEB)

    Lee Kerkhof

    2013-01-01

    The focus of our research was to provide a comprehensive study of the bacterioplankton populations off the coast of New Jersey near the Rutgers University marine field station using terminal restriction fragment polymorphism analysis (TRFLP) coupled to 16S rRNA genes for large data set studies. Our three revised objectives to this study became: (1) to describe bacterioplankton population dynamics in the Mid Atlantic Bight using TRFLP analysis of 16S rRNA genes. (2) to determine whether spatial and temporal factors are driving bacterioplankton community dynamics in the MAB using monthly samping along our transect line over a 2-year period. (3) to identify dominant members of a coastal bacterioplankton population by clonal library analysis of 16S rDNA genes and sequencing of PCR product corresponding to specific TRFLP peaks in the data set. Although open ocean time-series sites have been areas of microbial research for years, relatively little was known about the population dynamics of bacterioplankton communities in the coastal ocean on kilometer spatial and seasonal temporal scales. To gain a better understanding of microbial community variability, monthly samples of bacterial biomass were collected in 1995-1996 along a 34-km transect near the Long-Term Ecosystem Observatory (LEO-15) off the New Jersey coast. Surface and bottom sampling was performed at seven stations along a transect line with depths ranging from 1 to 35m (n=178). The data revealed distinct temporal patterns among the bacterioplankton communities in the Mid-Atlantic Bight rather than grouping by sample location or depth (figure 2-next page). Principal components analysis models supported the temporal patterns. In addition, partial least squares regression modeling could not discern a significant correlation from traditional oceanographic physical and phytoplankton nutrient parameters on overall bacterial community variability patterns at LEO-15. These results suggest factors not traditionally

  14. A new approach for the determination of the drag coefficient from the upper ocean response to a tropical cyclone: A feasibility study

    KAUST Repository

    Zedler, Sarah

    2011-12-30

    We seek to determine if a small number of measurements of upper ocean temperature and currents can be used to make estimates of the drag coefficient that have a smaller range of uncertainty than previously found. We adopt a numerical approach using forward models of the ocean\\'s response to a tropical cyclone, whereby the probability density function of drag coefficient values as a function of wind speed that results from adding realistic levels of noise to the simulated ocean response variables is sought. Allowing the drag coefficient two parameters of freedom, namely the values at 35 and at 45 m/s, we found that the uncertainty in the optimal value is about 20% for levels of instrument noise up to 1 K for a misfit function based on temperature, or 1.0 m/s for a misfit function based on 15 m velocity components. This is within tolerable limits considering the spread of measurement-based drag coefficient estimates. The results are robust for several different instrument arrays; the noise levels do not decrease by much for arrays with more than 40 sensors when the sensor positions are random. Our results suggest that for an ideal case, having a small number of sensors (20-40) in a data assimilation problem would provide sufficient accuracy in the estimated drag coefficient. © 2011 The Oceanographic Society of Japan and Springer.

  15. The role of biology in planetary evolution: cyanobacterial primary production in low‐oxygen Proterozoic oceans

    Science.gov (United States)

    Bryant, Donald A.; Macalady, Jennifer L.

    2016-01-01

    Summary Understanding the role of biology in planetary evolution remains an outstanding challenge to geobiologists. Progress towards unravelling this puzzle for Earth is hindered by the scarcity of well‐preserved rocks from the Archean (4.0 to 2.5 Gyr ago) and Proterozoic (2.5 to 0.5 Gyr ago) Eons. In addition, the microscopic life that dominated Earth's biota for most of its history left a poor fossil record, consisting primarily of lithified microbial mats, rare microbial body fossils and membrane‐derived hydrocarbon molecules that are still challenging to interpret. However, it is clear from the sulfur isotope record and other geochemical proxies that the production of oxygen or oxidizing power radically changed Earth's surface and atmosphere during the Proterozoic Eon, pushing it away from the more reducing conditions prevalent during the Archean. In addition to ancient rocks, our reconstruction of Earth's redox evolution is informed by our knowledge of biogeochemical cycles catalysed by extant biota. The emergence of oxygenic photosynthesis in ancient cyanobacteria represents one of the most impressive microbial innovations in Earth's history, and oxygenic photosynthesis is the largest source of O 2 in the atmosphere today. Thus the study of microbial metabolisms and evolution provides an important link between extant biota and the clues from the geologic record. Here, we consider the physiology of cyanobacteria (the only microorganisms capable of oxygenic photosynthesis), their co‐occurrence with anoxygenic phototrophs in a variety of environments and their persistence in low‐oxygen environments, including in water columns as well as mats, throughout much of Earth's history. We examine insights gained from both the rock record and cyanobacteria presently living in early Earth analogue ecosystems and synthesize current knowledge of these ancient microbial mediators in planetary redox evolution. Our analysis supports the hypothesis that anoxygenic

  16. Observations of rapid changes in N:P ratio associated with non-Redfield nutrient utilization in mesoscale eddies in the upper ocean

    Science.gov (United States)

    Dai, M.; Xu, Y.; Kao, S. J.; Huang, B.; Sun, J.; Sun, Z.

    2016-02-01

    The concept of Redfield Ratio,or the ocean's nutrient stoichiometry has been fundamental to understanding the ocean biogeochemistry, reflecting the balance of elements between the organisms and the chemical environment and thereby modulating to a large extent the metabolic status of an ecosystem as well as the ecosystem structure. Nutrient stoichiometry of the deep ocean as a consequence of the organic matter regeneration therein is very much homogeneous worldwide while at the upper ocean, changes in nutrient stoichiometryas being frequently observed are to be better understood in terms of their mechanism. Here we report direct observations of fast on a weekly time scale and large fluctuations of nitrate+nitrite (N+N) to soluble reactive phosphorus (SRP) ratios in the ambient seawater in responding to development of meso-scale eddies in an oligotrophic sea, the South China Sea. At the spin up and/or matured stages of eddies, the N:P ratio fluctuated up to 44 in the upper 100 m water column. Along the decay of theeddy, N:P ratio declined back to 3- 20; similar to a "no eddy" condition of 4-22. Along with the fluctuations of N:P ratio was the diatom dominance with the eddy development, while the community structure of the region in typical or non-eddy conditions was predominated by the pico-/nano-plankton as revealed by both the taxa identification and biogenic silicate measurements. This fast growing diatom group apparently had lower nutrient utilization of nitrogenrelative to silicate and/or phosphorus, augmenting the ambient seawater N:P and N:Si. Such preferential P utilization therefore by the fast growing diatomsresulted in significant variations during the different stages of the eddy development.

  17. Biological monitoring of Upper Three Runs Creek, Savannah River Site, Aiken County, South Carolina, March 1990--July 1991

    Energy Technology Data Exchange (ETDEWEB)

    1991-12-01

    In anticipation of the fall 1988 start up of effluent discharges into Upper Three Runs Creek by the F/H Area Effluent Treatment Facility of the Savannah River Site, Aiken, SC, a two and one half year biological study was initiated in June 1987. Upper Three Runs Creek is an intensively studied fourth order stream known for its high species richness. Designed to assess the potential impact of F/H area effluent on the creek, the study included qualitative and quantitative macroinvertebrate stream surveys at five sites (see map), chronic toxicity testing of the effluent, water chemistry and bioaccumulation analysis. In a March 1990 study of the potential impact of F/H Area effluent on the macroinvertebrate communities of Upper Three Runs Creek was extended, with reductions in the number of sites to be sampled and in the frequency of water chemistry sampling. This report presents the results of macroinvertebrate stream surveys at three sites, chronic toxicity testing of the effluent and water chemistry analysis of the three stream sites and the effluent from March 1990 to July 1991.

  18. Interest, Attitudes and Self-Efficacy Beliefs Explaining Upper-Secondary School Students' Orientation Towards Biology-Related Careers

    Science.gov (United States)

    Uitto, Anna

    2014-01-01

    The aim of the study was to discover the contribution of students' interest in school biology, as well as their self-efficacy and attitudes towards different science subjects and mathematics when explaining students' orientation towards biology-related careers at upper-secondary school. The data of 321 K-11 students (49% women) were…

  19. Role of upper ocean parameters in the genesis, intensification and tracks of cyclones over the Bay of Bengal

    Digital Repository Service at National Institute of Oceanography (India)

    Maneesha, K.; Sadhuram, Y.; Prasad, K.V.S.R.

    of high heat potential (>90 kj/cm2) in the western Gulf of Mexico (Goni et al. 2003, 2009; Shay et al. 2000). Further, Hurricanes Igor (tropical Atlantic) and Celia (Eastern North Pacific), Typhoon Megi (Western North Pacific) and Cyclone Phet (Arabian Sea... 2009/10 in the Gulf of Mexico and the southwestern Pacific Ocean, while there was an increase in the western Pacific Ocean, Arabian Sea and Bay of Bengal. All the above studies emphasize the importance of the UOHC in the genesis and intensification...

  20. Meta-analysis reveals complex marine biological responses to the interactive effects of ocean acidification and warming

    Science.gov (United States)

    Harvey, Ben P; Gwynn-Jones, Dylan; Moore, Pippa J

    2013-01-01

    Ocean acidification and warming are considered two of the greatest threats to marine biodiversity, yet the combined effect of these stressors on marine organisms remains largely unclear. Using a meta-analytical approach, we assessed the biological responses of marine organisms to the effects of ocean acidification and warming in isolation and combination. As expected biological responses varied across taxonomic groups, life-history stages, and trophic levels, but importantly, combining stressors generally exhibited a stronger biological (either positive or negative) effect. Using a subset of orthogonal studies, we show that four of five of the biological responses measured (calcification, photosynthesis, reproduction, and survival, but not growth) interacted synergistically when warming and acidification were combined. The observed synergisms between interacting stressors suggest that care must be made in making inferences from single-stressor studies. Our findings clearly have implications for the development of adaptive management strategies particularly given that the frequency of stressors interacting in marine systems will be likely to intensify in the future. There is now an urgent need to move toward more robust, holistic, and ecologically realistic climate change experiments that incorporate interactions. Without them accurate predictions about the likely deleterious impacts to marine biodiversity and ecosystem functioning over the next century will not be possible. PMID:23610641

  1. The role of biology in planetary evolution: cyanobacterial primary production in low-oxygen Proterozoic oceans.

    Science.gov (United States)

    Hamilton, Trinity L; Bryant, Donald A; Macalady, Jennifer L

    2016-02-01

    Understanding the role of biology in planetary evolution remains an outstanding challenge to geobiologists. Progress towards unravelling this puzzle for Earth is hindered by the scarcity of well-preserved rocks from the Archean (4.0 to 2.5 Gyr ago) and Proterozoic (2.5 to 0.5 Gyr ago) Eons. In addition, the microscopic life that dominated Earth's biota for most of its history left a poor fossil record, consisting primarily of lithified microbial mats, rare microbial body fossils and membrane-derived hydrocarbon molecules that are still challenging to interpret. However, it is clear from the sulfur isotope record and other geochemical proxies that the production of oxygen or oxidizing power radically changed Earth's surface and atmosphere during the Proterozoic Eon, pushing it away from the more reducing conditions prevalent during the Archean. In addition to ancient rocks, our reconstruction of Earth's redox evolution is informed by our knowledge of biogeochemical cycles catalysed by extant biota. The emergence of oxygenic photosynthesis in ancient cyanobacteria represents one of the most impressive microbial innovations in Earth's history, and oxygenic photosynthesis is the largest source of O2 in the atmosphere today. Thus the study of microbial metabolisms and evolution provides an important link between extant biota and the clues from the geologic record. Here, we consider the physiology of cyanobacteria (the only microorganisms capable of oxygenic photosynthesis), their co-occurrence with anoxygenic phototrophs in a variety of environments and their persistence in low-oxygen environments, including in water columns as well as mats, throughout much of Earth's history. We examine insights gained from both the rock record and cyanobacteria presently living in early Earth analogue ecosystems and synthesize current knowledge of these ancient microbial mediators in planetary redox evolution. Our analysis supports the hypothesis that anoxygenic photosynthesis

  2. Baseline marine biological survey at the Peacock Point outfall and other point-source discharges on Wake Atoll, Pacific Ocean in 1998-06 (NODC Accession 0000247)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The U.S. Army Space and Missile Defense Command (SMDC) in support of the Ballistic Missile Defense Organization (BMDO) sponsored a marine biological survey at Wake...

  3. NODC Standard Product: International ocean atlas Volume 2 - Biological atlas of the Arctic Seas 2000 - Plankton of the Barents and Kara Seas (1 disc set) (NODC Accession 0098568)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Presented in this CD-ROM are physical and biological data for the region extending from the Barents Sea to the Kara Sea during 158 scientific cruises for the period...

  4. Biological oceanography across the Southern Indian Ocean – basinscale trends in the zooplankton community

    DEFF Research Database (Denmark)

    Jonasdottir, Sigrun; Nielsen, Torkel Gissel; Borg, Christian Marc Andersen

    2013-01-01

    We present a study on the protozooplankton 45 mm and copepods larger than 50 mm at a series of contrasting stations across the Southern Indian Ocean (SIO). Numerically, over 80% of the copepod community across the transect was less than 650 mm in size, dominated by nauplii, and smaller copepods...... stations. Secondary production was low (carbon specific egg production o0.14 d1) but typical for food limited oligotrophic oceans...

  5. Deformation associated to exhumation by detachment faulting of upper mantle rocks in a fossil Ocean Continent Transition: The example of the Totalp unit in SE Switzerland

    Science.gov (United States)

    Picazo, S.; Manatschal, G.; Cannat, M.

    2013-12-01

    The exhumation of upper mantle rocks along detachment faults is widespread at Mid-Ocean Ridges and at the Ocean-Continent Transition (OCT) of rifted continental margins. Thermo-mechanical models indicate that significant strain softening of the fault rocks in the footwall is required in order to produce such large fault offsets. Our work focuses on deformation textures, and the associated mineralogy in ultramafic rocks sampled in the upper levels of the footwall next to the exhumation fault. We present two OCT examples, the Totalp relict of a paleo-Tethys OCT exposed in SE Switzerland, and the Iberian distal margin (ODP Leg 173 Site 1070). We built a new geological map and a section of the Totalp unit near Davos (SE Switzerland) and interpreted this area as a local exposure of a paleo-seafloor that is formed by an exhumed detachment surface and serpentinized peridotites. The top of the exhumed mantle rocks is made of ophicalcites that resulted from the carbonation of serpentine under static conditions at the seafloor. The ophicalcites preserve depositional contacts with Upper Jurassic to Lower Cretaceous pelagic sediments. These sequences did not exceed prehnite-pumpellyite metamorphic facies conditions, and locally escaped Alpine deformation. Thin mylonitic shear zones as well as foliated amphibole-bearing ultramafic rocks have been mapped. The age of these rocks and the link with the final exhumation history are yet unknown but since amphibole-bearing ultramafic rocks can be found as clasts in cataclasites related to the detachment fault, they pre-date detachment faulting. Our petrostructural study of the exhumed serpentinized rocks also reveals a deformation gradient from cataclasis to gouge formation within 150m in the footwall of the proposed paleo-detachment fault. This deformation postdates serpentinization. It involves a component of plastic deformation of serpentine in the most highly strained intervals that has suffered pronounced grain-size reduction and

  6. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: T_MAMMAL (Terrestrial Mammal Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for terrestrial mammals for the Upper Coast of Texas. Vector polygons in this data set represent...

  7. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: M_MAMMAL (Marine Mammal Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for dolphins and manatees for the Upper Coast of Texas. Vector polygons in this data set represent marine...

  8. Thermal biology of Pacific cicada killers, Sphecius convallis Patton, in the Upper Sonoran Desert.

    Science.gov (United States)

    Coelho, Joseph R; Holliday, Charles W; Hastings, Jon M; Phillips, Christy M

    2016-04-01

    A comprehensive investigation of the Pacific cicada killer, Sphecius convallis Patton, was undertaken to examine the behavioral and physiological mechanisms by which they are able to complete their life cycle in the thermal extremes of the Upper Sonoran Desert. S. convallis were endothermic, exhibiting elevated and relatively constant thorax temperatures during many activities. Males basked in trees at dawn to warm up, then used a variety of behaviors and perching strategies to maintain thorax temperature during territorial behavior. The thorax temperature of females was highest during provisioning and orientation flights, somewhat lower while investigating burrows, and lowest while digging burrows. The optimal thorax temperature for flight was about 40°C, which was approximated most closely by males resting in the shade during the afternoon. In mating clusters, the mated male was the hottest, the female was coolest and the other males were intermediate. Wasps lost about 5% of body mass during heating treatments, and may use evaporative water loss for cooling. Pacific cicada killers use a complex suite of behavioral and physiological adaptations to regulate body temperature during their nesting season. Copyright © 2016 Elsevier Ltd. All rights reserved.

  9. Seismic Velocity Variation and Evolution of the Upper Oceanic Crust across the Mid-Atlantic Ridge at 1.3°S

    Science.gov (United States)

    Jian, H.; Singh, S. C.

    2017-12-01

    The oceanic crust that covers >70% of the solid earth is formed at mid-ocean ridges, but get modified as it ages. Understanding the evolution of oceanic crust requires investigations of crustal structures that extend from zero-age on the ridge axis to old crust. In this study, we analyze a part of a 2000-km-long seismic transect that crosses the Mid-Atlantic Ridge segment at 1.3°S, south of the Chain transform fault. The seismic data were acquired using a 12-km-long multi-sensor streamer and dense air-gun shots. Using a combination of downward continuation and seismic tomography methods, we have derived a high-resolution upper crustal velocity structure down to 2-2.5 km depth below the seafloor, from the ridge axis to 3.5 Ma on both sides of the ridge axis. The results demonstrate that velocities increase at all depths in the upper crust as the crust ages, suggesting that hydrothermal precipitations seal the upper crustal pore spaces. This effect is most significant in layer 2A, causing a velocity increase of 0.5-1 km/s after 1-1.5 Ma, beyond which the velocity increase is very small. Furthermore, the results exhibit a significant decrease in both the frequency and amplitude of the low-velocity anomalies associated with faults beyond 1-1.5 Ma, when faults become inactive, suggesting a linkage between the sealing of fault space and the extinction of hydrothermal activity. Besides, the off-axis velocities are systematically higher on the eastern side of the ridge axis compared to on the western side, suggesting that a higher hydrothermal activity should exist on the outside-corner ridge flank than on the inside-corner flank. While the tomography results shown here cover 0-3.5 Ma crust, the ongoing research will further extend the study area to older crust and also incorporating pre-stack migration and full waveform inversion methods to improve the seismic structure.

  10. The Upper- to Middle-Crustal Section of the Alisitos Oceanic Arc, (Baja, Mexico): an Analog of the Izu-Bonin-Marianas (IBM) Arc

    Science.gov (United States)

    Medynski, S.; Busby, C.; DeBari, S. M.; Morris, R.; Andrews, G. D.; Brown, S. R.; Schmitt, A. K.

    2016-12-01

    The Rosario segment of the Cretaceous Alisitos arc in Baja California is an outstanding field analog for the Izu-Bonin-Mariana (IBM) arc, because it is structurally intact, unmetamorphosed, and has superior three-dimensional exposures of an upper- to middle-crustal section through an extensional oceanic arc. Previous work1, done in the pre-digital era, used geologic mapping to define two phases of arc evolution, with normal faulting in both phases: (1) extensional oceanic arc, with silicic calderas, and (2) oceanic arc rifting, with widespread diking and dominantly mafic effusions. Our new geochemical data match the extensional zone immediately behind the Izu arc front, and is different from the arc front and rear arc, consistent with geologic relations. Our study is developing a 3D oceanic arc crustal model, with geologic maps draped on Google Earth images, and GPS-located outcrop information linked to new geochemical, geochronological and petrographic data, with the goal of detailing the relationships between plutonic, hypabyssal, and volcanic rocks. This model will be used by scientists as a reference model for past (IBM-1, 2, 3) and proposed IBM (IBM-4) drilling activities. New single-crystal zircon analysis by TIMS supports the interpretation, based on batch SIMS analysis of chemically-abraded zircon1, that the entire upper-middle crustal section accumulated in about 1.5 Myr. Like the IBM, volcanic zircons are very sparse, but zircon chemistry on the plutonic rocks shows trace element compositions that overlap to those measured in IBM volcanic zircons by A. Schmitt (unpublished data). Zircons have U-Pb ages up to 20 Myr older than the eruptive age, suggesting remelting of older parts of the arc, similar to that proposed for IBM (using different evidence). Like IBM, some very old zircons are also present, indicating the presence of old crustal fragments, or sediments derived from them, in the basement. However, our geochemical data show that the magmas are

  11. Integrating Facebook in Upper Secondary Biology Instruction: A Case Study of Students' Situational Interest and Participation in Learning Communication

    Science.gov (United States)

    Dohn, Niels Bonderup; Dohn, Nina Bonderup

    2017-12-01

    The sciences are often perceived by students as irrelevant as they do not see the content of science as related to their daily lives. Web 2.0-mediated activities are characterized by user-driven content production, collaboration, and multi-way communication. It has been proposed that employing Web 2.0 in educational activities will promote richer opportunities for making learning personally meaningful, collaborative, and socially relevant. Since Facebook is already in use among youths, it potentially provides a communicative link between educational content and students' lives. The present study was conducted as a case study to provide an inductive, explorative investigation of whether and how the integration of Facebook into upper secondary biology can affect interest in biology and participation in learning communication. The results indicate that the coupling of formal and informal communication practices on Facebook serves to maintain interest and open up new learning possibilities while at the same time creating barriers to communication. These barriers are due to distractions, ethical issues, and a certain depreciation of the activities ensuing from the everydayness of Facebook as a communication platform. In conclusion, use of Facebook as an educational platform is not clearly good or bad.

  12. Particle optical backscattering along a chlorophyll gradient in the upper layer of the eastern South Pacific Ocean

    Directory of Open Access Journals (Sweden)

    Y. Huot

    2008-04-01

    Full Text Available The particulate scattering, bp, and backscattering, bbp, coefficients are determined by the concentration and physical properties of suspended particles in the ocean. They provide a simple description of the influence of these particles on the scattering of light within the water column. For the remote observation of ocean color, bbp along with the total absorption coefficient govern the amount and spectral qualities of light leaving the sea surface. However, for the construction and validation of ocean color models measurements of bbp are still lacking, especially at low chlorophyll a concentrations ([Chl]. Here, we examine the relationships between spectral bbp and bp vs. [Chl] along an 8000 km transect crossing the Case 1 waters of the eastern South Pacific Gyre. In these waters, over the entire range of [Chl] encountered (~0.02–2 mg m3, both bbp and bp can be related to [Chl] by power functions (i.e. bp or bbp=α[Chl]β. Regression analyses are carried out to provide the parameters α and β for several wavelengths throughout the visible for both bbp and bp. When applied to the data, these functions retrieve the same fraction of variability in bbp and bp (coefficients of determination between 0.82 and 0.88. The bbp coefficient fall within the bounds of previous measurements at intermediate and high [Chl] recently published. Its dependence on [Chl] below ~0.1 mg m−3 is described for the first time with in situ data. The backscattering ratio (i.e. bbp/bp with values near 0.01 for all stations appears to be spectrally neutral and not significantly dependent on [Chl]. These results should foster the

  13. Primary and Secondary Organic Marine Aerosol and Oceanic Biological Activity: Recent Results and New Perspectives for Future Studies

    Directory of Open Access Journals (Sweden)

    Matteo Rinaldi

    2010-01-01

    Full Text Available One of the most important natural aerosol systems at the global level is marine aerosol that comprises both organic and inorganic components of primary and secondary origin. The present paper reviews some new results on primary and secondary organic marine aerosol, achieved during the EU project MAP (Marine Aerosol Production, comparing them with those reported in the recent literature. Marine aerosol samples collected at the coastal site of Mace Head, Ireland, show a chemical composition trend that is influenced by the oceanic biological activity cycle, in agreement with other observations. Laboratory experiments show that sea-spray aerosol from biologically active sea water can be highly enriched in organics, and the authors highlight the need for further studies on the atmospheric fate of such primary organics. With regard to the secondary fraction of organic aerosol, the average chemical composition and molecular tracer (methanesulfonic-acid, amines distribution could be successfully characterized by adopting a multitechnique analytical approach.

  14. Decadal trends of the upper ocean salinity in the tropical Indo-Pacific since mid-1990s.

    Science.gov (United States)

    Du, Yan; Zhang, Yuhong; Feng, Ming; Wang, Tianyu; Zhang, Ningning; Wijffels, Susan

    2015-11-02

    A contrasting trend pattern of sea surface salinity (SSS) between the western tropical Pacific (WTP) and the southeastern tropical Indian Ocean (SETIO) is observed during 2004-2013, with significant salinity increase in the WTP and freshening in the SETIO. In this study, we show that increased precipitation around the Maritime Continent (MC), decreased precipitation in the western-central tropical Pacific, and ocean advection processes contribute to the salinity trends in the region. From a longer historical record, these salinity trends started in the mid-1990s, a few years before the Global Warming Hiatus from 1998 to present. The salinity trends are associated a strengthening trend of the Walker Circulation over the tropical Indo-Pacific, which have reversed the long-term salinity changes in the tropical Indo-Pacific as a consequence of global warming. Understanding decadal variations of SSS in the tropical Indo-Pacific will better inform on how the tropical hydrological cycle will be affected by the natural variability and a warming climate.

  15. Environmental and biological controls of urban tree transpiration in the Upper Midwest

    Science.gov (United States)

    Peters, E. B.; McFadden, J.; Montgomery, R.

    2009-12-01

    Urban trees provide a variety of ecosystem services to urban and suburban areas, including carbon uptake, climate amelioration, energy reduction, and stormwater management. Tree transpiration, in particular, modifies urban water budgets by providing an alternative pathway for water after rain events. The relative importance of environmental and biological controls on transpiration are poorly understood in urban areas, yet these controls are important for quantifying and scaling up the ecosystem services that urban trees provide at landscape and regional scales and predicting how urban ecosystems will respond to climate changes. The objectives of our study were to quantify the annual cycle of tree transpiration in an urban ecosystem and to determine how different urban tree species and plant functional types respond to environmental drivers. We continuously measured whole-tree transpiration using thermal dissipation sap flow at four urban forest stands that were broadly representative of the species composition and tree sizes found in a suburban residential neighborhood of Minneapolis-Saint Paul, Minnesota. A total of 40 trees, representing different species, plant functional types, successional stages, and xylem anatomy, were sampled throughout the 2007 and 2008 growing seasons (April-November). At each site we monitored soil moisture, air temperature, and relative humidity continuously, and we measured leaf area index weekly. Urban tree transpiration was strongly correlated with diurnal changes in vapor pressure deficit and photosynthetically active radiation and with seasonal changes in leaf area index. We found that plant functional type better explained species differences in transpiration per canopy area than either successional stage or xylem anatomy, largely due to differences in canopy structure between conifer and broad-leaf deciduous trees. We also observed inter-annual differences in transpiration rates due to a mid-season drought and longer growing

  16. Corrigendum to "Upper ocean climate of the Eastern Mediterranean Sea during the Holocene Insolation Maximum – a model study" published in Clim. Past, 7, 1103–1122, 2011

    Directory of Open Access Journals (Sweden)

    G. Schmiedl

    2011-11-01

    Full Text Available Nine thousand years ago (9 ka BP, the Northern Hemisphere experienced enhanced seasonality caused by an orbital configuration close to the minimum of the precession index. To assess the impact of this "Holocene Insolation Maximum" (HIM on the Mediterranean Sea, we use a regional ocean general circulation model forced by atmospheric input derived from global simulations. A stronger seasonal cycle is simulated by the model, which shows a relatively homogeneous winter cooling and a summer warming with well-defined spatial patterns, in particular, a subsurface warming in the Cretan and western Levantine areas. The comparison between the SST simulated for the HIM and a reconstruction from planktonic foraminifera transfer functions shows a poor agreement, especially for summer, when the vertical temperature gradient is strong. As a novel approach, we propose a reinterpretation of the reconstruction, to consider the conditions throughout the upper water column rather than at a single depth. We claim that such a depth-integrated approach is more adequate for surface temperature comparison purposes in a situation where the upper ocean structure in the past was different from the present-day. In this case, the depth-integrated interpretation of the proxy data strongly improves the agreement between modelled and reconstructed temperature signal with the subsurface summer warming being recorded by both model and proxies, with a small shift to the south in the model results. The mechanisms responsible for the peculiar subsurface pattern are found to be a combination of enhanced downwelling and wind mixing due to strengthened Etesian winds, and enhanced thermal forcing due to the stronger summer insolation in the Northern Hemisphere. Together, these processes induce a stronger heat transfer from the surface to the subsurface during late summer in the western Levantine; this leads to an enhanced heat piracy in this region, a process never identified before

  17. Hydrothermal and Chemosynthetic Ecosystems in the Southern Ocean: Current Knowledge on their Biology Paper 217790

    Science.gov (United States)

    Linse, K.; Rogers, A. D.; Bohrmann, G.; Copley, J.; Tyler, P. A.

    2017-12-01

    The existence of hydrothermal and other chemosynthetic ecosystems is not surprising in the Antarctic, with its active volcanoes, mid-ocean ridges and back-arc basins, and abundance of marine mammals. In the last two decades a variety of active chemosynthetic ecosystems have been discovered in the Southern Ocean, including low- and high-temperature hydrothermal vents, methane seeps, and whalefalls. Here a summary of the data from the known chemosynthetic communites will be presented, comparing the faunas of vent sites in the Bransfield Strait with those of the East Scotia Ridge (ESR) and the South Sandwich Arc, assessing the fauna at the South Georgia methane seep sites, and discussing the fauna on Antarctic whale falls. As the faunal assemblages of the ESR vents are the most studied in detail to date, this talk therefore focusses on the diversity and composition of the ESR macrofaunal assemblages, their foodweb structure and microdistributions in relation to fluid chemistry and microbiology, and their phylogenetic and biogeographic relationships. The Southern Ocean drives the global ocean conveyor belt, and is suggested to be the centre of origin for global deep-sea fauna, as well as a region of high deep-sea species diversity. In the context of chemosynthetic environments, it may provide a gateway connecting the global vent and seep systems. The mostly endemic species of Southern Ocean vent macrofauna show links to either one or more oceans (Atlantic, Indian, and Pacific), with some evidence for circum-Antarctic connection. The ESR species Gigantopelta chessoia, Kiwa tyleri and Vulcanolepas scotiaensis have their closest known relatives at the Longqi Vent Field on the Southwest Indian Ridge (SWIR), and one species of polynoid polychaete is known from ESR and SWIR vents. Meanwhile, Lepetdrilus sp. and a vesiocomyid clam are linked with species in the Atlantic vent fields. The stichasterid Paulasterias tyleri, the polychaete Rarricirrus jennae and the anthozoan

  18. The influence of bubble populations generated under windy conditions on the blue-green light transmission in the upper ocean: An exploratory approach

    Science.gov (United States)

    Wang, Chengan; Tan, Jianyu; Lai, Qingzhi

    2016-12-01

    The “blue-green window” in the ocean plays an important role in functions such as communication between vessels, underwater target identification, and remote sensing. In this study, the transmission process of blue-green light in the upper ocean is analyzed numerically using the Monte Carlo method. First, the effect of total number of photons on the numerical results is evaluated, and the most favorable number is chosen to ensure accuracy without excessive costs for calculation. Then, the physical and mathematical models are constructed. The rough sea surface is generated under windy conditions and the transmission signals are measured in the far field. Therefore, it can be conceptualized as a 1D slab with a rough boundary surface. Under windy conditions, these bubbles form layers that are horizontally homogeneous and decay exponentially with depth under the influence of gravity. The effects of bubble populations on the process of blue-green light transmission at different wind speeds, wavelengths, angle of incidence and chlorophyll-a concentrations are studied for both air-incident and water-incident cases. The results of this study indicate that the transmission process of blue-green light is significantly influenced by bubbles under high wind-speed conditions.

  19. Radiation processing of organics and biological materials exposed to ocean world surface conditions.

    Science.gov (United States)

    Hand, K. P.; Carlson, R. W.

    2017-12-01

    Assessing the habitability of ocean worlds, such as Europa and Enceladus, motivates a search for endogenous carbon compounds that could be indicative of a habitable, or even inhabited, subsurface liquid water environment. We have examined the role of destruction and synthesis of organic compounds via 10 keV electron bombardment of ices generated under temperature and pressure conditions comparable to Europa and Enceladus. Short-chain organics and ammonia, in combination with water, were exposed to Mrad to Grad doses and observed to evolve to a `lost' carbon fraction (CO and CO2) and a `retained' carbon fraction (consisting of a highly refractory `ocean world tholin' populated by highly radiation resistant carbonyl, aldehyde, and nitrile components). The retained fraction is of key importance as this likely represents the observable fraction for future spacecraft investigations. We also irradiated microbial spores (B. pumilis) to approximately 2 Grad and have found persistence of biomolecule fractions derived from proteins and nucleic acids.

  20. Designing and Implementing a Computational Methods Course for Upper-level Undergraduates and Postgraduates in Atmospheric and Oceanic Sciences

    Science.gov (United States)

    Nelson, E.; L'Ecuyer, T. S.; Douglas, A.; Hansen, Z.

    2017-12-01

    In the modern computing age, scientists must utilize a wide variety of skills to carry out scientific research. Programming, including a focus on collaborative development, has become more prevalent in both academic and professional career paths. Faculty in the Department of Atmospheric and Oceanic Sciences at the University of Wisconsin—Madison recognized this need and recently approved a new course offering for undergraduates and postgraduates in computational methods that was first held in Spring 2017. Three programming languages were covered in the inaugural course semester and development themes such as modularization, data wrangling, and conceptual code models were woven into all of the sections. In this presentation, we will share successes and challenges in developing a research project-focused computational course that leverages hands-on computer laboratory learning and open-sourced course content. Improvements and changes in future iterations of the course based on the first offering will also be discussed.

  1. Quantifying the biological impact of surface ocean light attenuation by colored detrital matter in an ESM using a new optical parameterization

    Science.gov (United States)

    Kim, G. E.; Pradal, M.-A.; Gnanadesikan, A.

    2015-08-01

    comparing the competing factors of diminished light availability and increased nutrient availability on phytoplankton growth in the upper 200 m. Understanding changes in biological productivity requires both surface and depth-resolved information. Surface trends may be minimal or of the opposite sign than depth-integrated amounts, depending on the vertical structure of phytoplankton abundance.

  2. Biological, chemical, and temperature profile data collected using bottle casts from the ALMIRANTE SALDANHA in South Atlantic Ocean from 07 February 1957 to 04 December 1957 (NODC Accession 7601281)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Biological and chemical data were collected using net and bottle casts from the ALMIRANTE SALDANHA off the coastal waters of Brazil in South Atlantic Ocean from 07...

  3. Upper ocean carbon flux determined by the 234Th approach and sediment traps using size-fractionated POC and 234Th data from the Golf of Mexico

    International Nuclear Information System (INIS)

    Hung, Chin-Chang; Roberts, Kimberly A.; Santschi, Peter H.; Guo, Laodong

    2004-01-01

    Size-fractionated particulate 234 Th and particulate organic carbon (POC) fluxes were measured in the Gulf of Mexico during 2000 and 2001 in order to obtain a better estimation of upper ocean organic carbon export out of the euphotic zone within cold core and warm core rings, and to assess the relative merit of sediment trap and POC/ 234 Th methods. In 2000, the flux of POC measured by sediment traps at 120 m ranged from 60 to 148 mg C m -2 d -1 , while 234 Th-derived POC fluxes in large particles (>53 μm) varied from 18 to 61 mg C m -2 d -1 using the ratio of POC/ 234 Th at 120 m, and from 51 to 163 mg C m -2 d -1 using an average ratio of POC/ 234 Th for the upper 120 m water column. In 2001, the fluxes of POC measured by traps deployed at 120 m water depth ranged from 39 to 48 mg C m -2 d -1 , while the 234 Th-derived POC fluxes in large particles (>53 μm) varied from 7 to 37 mg C m -2 d -1 using a ratio of POC/ 234 Th at 120 m, and from 37 to 45 mg C m -2 d -1 using an average ratio of POC/ 234 Th within the 0-120 m interval. The results show that POC fluxes estimated by the 234 Th method using the average ratio of POC/ 234 Th within the euphotic zone are similar to those measured by sediment traps. Furthermore, the results demonstrate that the variability in POC export fluxes estimated by the 234 Th/ 238 U disequilibrium approach is strongly related to the ratio of POC/ 234 Th that is taken, and for which we have independent evidence that it may be controlled by the chemical composition of the suspended particles. The results also reveal that using POC/ 234 Th ratios in small particles may result in an estimate of the POC export flux that is considerably higher than when using POC/ 234 Th ratios in large particles (>53 μm). The POC flux calculated from ratios in large particles is, however, more comparable to the POC flux determined directly by sediment traps, but both of these estimates are much lower than that determined by using the POC/ 234 Th ratios in

  4. Two-component mantle melting-mixing model for the generation of mid-ocean ridge basalts: Implications for the volatile content of the Pacific upper mantle

    Science.gov (United States)

    Shimizu, Kei; Saal, Alberto E.; Myers, Corinne E.; Nagle, Ashley N.; Hauri, Erik H.; Forsyth, Donald W.; Kamenetsky, Vadim S.; Niu, Yaoling

    2016-03-01

    We report major, trace, and volatile element (CO2, H2O, F, Cl, S) contents and Sr, Nd, and Pb isotopes of mid-ocean ridge basalt (MORB) glasses from the Northern East Pacific Rise (NEPR) off-axis seamounts, the Quebrada-Discovery-GoFar (QDG) transform fault system, and the Macquarie Island. The incompatible trace element (ITE) contents of the samples range from highly depleted (DMORB, Th/La ⩽ 0.035) to enriched (EMORB, Th/La ⩾ 0.07), and the isotopic composition spans the entire range observed in EPR MORB. Our data suggest that at the time of melt generation, the source that generated the EMORB was essentially peridotitic, and that the composition of NMORB might not represent melting of a single upper mantle source (DMM), but rather mixing of melts from a two-component mantle (depleted and enriched DMM or D-DMM and E-DMM, respectively). After filtering the volatile element data for secondary processes (degassing, sulfide saturation, assimilation of seawater-derived component, and fractional crystallization), we use the volatiles to ITE ratios of our samples and a two-component mantle melting-mixing model to estimate the volatile content of the D-DMM (CO2 = 22 ppm, H2O = 59 ppm, F = 8 ppm, Cl = 0.4 ppm, and S = 100 ppm) and the E-DMM (CO2 = 990 ppm, H2O = 660 ppm, F = 31 ppm, Cl = 22 ppm, and S = 165 ppm). Our two-component mantle melting-mixing model reproduces the kernel density estimates (KDE) of Th/La and 143Nd/144Nd ratios for our samples and for EPR axial MORB compiled from the literature. This model suggests that: (1) 78% of the Pacific upper mantle is highly depleted (D-DMM) while 22% is enriched (E-DMM) in volatile and refractory ITE, (2) the melts produced during variable degrees of melting of the E-DMM controls most of the MORB geochemical variation, and (3) a fraction (∼65% to 80%) of the low degree EMORB melts (produced by ∼1.3% melting) may escape melt aggregation by freezing at the base of the oceanic lithosphere, significantly enriching it in

  5. Bioluminescence in the Ocean: Origins of Biological, Chemical, and Ecological Diversity

    Science.gov (United States)

    Widder, E. A.

    2010-05-01

    From bacteria to fish, a remarkable variety of marine life depends on bioluminescence (the chemical generation of light) for finding food, attracting mates, and evading predators. Disparate biochemical systems and diverse phylogenetic distribution patterns of light-emitting organisms highlight the ecological benefits of bioluminescence, with biochemical and genetic analyses providing new insights into the mechanisms of its evolution. The origins and functions of some bioluminescent systems, however, remain obscure. Here, I review recent advances in understanding bioluminescence in the ocean and highlight future research efforts that will unite molecular details with ecological and evolutionary relationships.

  6. Large-scale temperature and salinity changes in the upper Canadian Basin of the Arctic Ocean at a time of a drastic Arctic Oscillation inversion

    Directory of Open Access Journals (Sweden)

    P. Bourgain

    2013-04-01

    Full Text Available Between 2008 and 2010, the Arctic Oscillation index over Arctic regions shifted from positive values corresponding to more cyclonic conditions prevailing during the 4th International Polar Year (IPY period (2007–2008 to extremely negative values corresponding to strong anticyclonic conditions in 2010. In this context, we investigated the recent large-scale evolution of the upper western Arctic Ocean, based on temperature and salinity summertime observations collected during icebreaker campaigns and from ice-tethered profilers (ITPs drifting across the region in 2008 and 2010. Particularly, we focused on (1 the freshwater content which was extensively studied during previous years, (2 the near-surface temperature maximum due to incoming solar radiation, and (3 the water masses advected from the Pacific Ocean into the Arctic Ocean. The observations revealed a freshwater content change in the Canadian Basin during this time period. South of 80° N, the freshwater content increased, while north of 80° N, less freshening occurred in 2010 compared to 2008. This was more likely due to the strong anticyclonicity characteristic of a low AO index mode that enhanced both a wind-generated Ekman pumping in the Beaufort Gyre and a possible diversion of the Siberian River runoff toward the Eurasian Basin at the same time. The near-surface temperature maximum due to incoming solar radiation was almost 1 °C colder in the southern Canada Basin (south of 75° N in 2010 compared to 2008, which contrasted with the positive trend observed during previous years. This was more likely due to higher summer sea ice concentration in 2010 compared to 2008 in that region, and surface albedo feedback reflecting more sun radiation back in space. The Pacific water (PaW was also subjected to strong spatial and temporal variability between 2008 and 2010. In the Canada Basin, both summer and winter PaW signatures were stronger between 75° N and 80° N. This was more likely

  7. Dissolved Fe in the Deep and Upper Arctic Ocean With a Focus on Fe Limitation in the Nansen Basin

    Directory of Open Access Journals (Sweden)

    Micha J. A. Rijkenberg

    2018-03-01

    Full Text Available Global warming resulting from the release of anthropogenic carbon dioxide is rapidly changing the Arctic Ocean. Over the last decade sea ice declined in extent and thickness. As a result, improved light availability has increased Arctic net primary production, including in under-ice phytoplankton blooms. During the GEOTRACES cruise PS94 in the summer of 2015 we measured dissolved iron (DFe, nitrate and phosphate throughout the central part of the Eurasian Arctic. In the deeper waters concentrations of DFe were higher, which we relate to resuspension on the continental slope in the Nansen Basin and hydrothermal activity at the Gakkel Ridge. The main source of DFe in the surface was the Trans Polar Drift (TPD, resulting in concentrations up to 4.42 nM. Nevertheless, using nutrient ratios we show that a large under-ice bloom in the Nansen basin was limited by Fe. Fe limitation potentially prevented up to 54% of the available nitrate and nitrite from being used for primary production. In the Barents Sea, Fe is expected to be the first nutrient to be depleted as well. Changes in the Arctic biogeochemical cycle of Fe due to retreating ice may therefore have large consequences for primary production, the Arctic ecosystem and the subsequent drawdown of carbon dioxide.

  8. Behaviour of nickel, copper, zinc and cadmium in the upper 300 m of a transect in the Southern Ocean (57°-62°S, 49°W)

    NARCIS (Netherlands)

    Nolting, R.F.; Baar, H.J.W. de

    1994-01-01

    The distributions of Ni, Cu, Zn and Cd in relation to phosphate, nitrate and silicate in the upper 300 m of a transect in the Southern Ocean were studied. This transect covers the Scotia Sea, the Confluence and the Weddell Sea. These three watermasses are clearly separated by their temperature and

  9. Biological, physical, nutrients, sediment, and other data from sediment sampler-grab, bottle, and CTD casts in the Arabian Sea, Equatorial Pacific Ocean, Northeast Atlantic Ocean, and Southern Oceans as part of the Long Term Monitoring East-West Flower Garden Banks project from 08 January 1995 to 08 April 1998 (NODC Accession 0001155)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Biological, physical, nutrients, sediment, and other data were collected using sediment sampler-grab, bottle and CTD casts in the Arabian Sea, North/South Pacific...

  10. An updated synthesis of the observed and projected impacts of climate change on the chemical, physical and biological processes in the oceans

    Directory of Open Access Journals (Sweden)

    Ella Louise Howes

    2015-06-01

    Full Text Available The 5th Assessment Report (AR5 of the Intergovernmental Panel on Climate Change (IPCC states with very high certainty that anthropogenic emissions have caused measurable changes in the physical ocean environment. These changes are summarized with special focus on those that are predicted to have the strongest, most direct effects on ocean biological processes; namely, ocean warming and associated phenomena (including stratification and sea level rise as well as deoxygenation and ocean acidification. The biological effects of these changes are then discussed for microbes (including phytoplankton, plants, animals, warm and cold-water corals, and ecosystems. The IPCC AR5 highlighted several areas related to both the physical and biological processes that required further research. As a rapidly developing field, there have been many pertinent studies published since the cut off dates for the AR5, which have increased our understanding of the processes at work. This study undertook an extensive review of recently published literature to update the findings of the AR5 and provide a synthesized review on the main issues facing future oceans. The level of detail provided in the AR5 and subsequent work provided a basis for constructing projections of the state of ocean ecosystems in 2100 under two the Representative Concentration Pathways RCP4.5 and 8.5. Finally the review highlights notable additions, clarifications and points of departure from AR5 provided by subsequent studies.

  11. Biological production models as elements of coupled, atmosphere-ocean models for climate research

    Science.gov (United States)

    Platt, Trevor; Sathyendranath, Shubha

    1991-01-01

    Process models of phytoplankton production are discussed with respect to their suitability for incorporation into global-scale numerical ocean circulation models. Exact solutions are given for integrals over the mixed layer and the day of analytic, wavelength-independent models of primary production. Within this class of model, the bias incurred by using a triangular approximation (rather than a sinusoidal one) to the variation of surface irradiance through the day is computed. Efficient computation algorithms are given for the nonspectral models. More exact calculations require a spectrally sensitive treatment. Such models exist but must be integrated numerically over depth and time. For these integrations, resolution in wavelength, depth, and time are considered and recommendations made for efficient computation. The extrapolation of the one-(spatial)-dimension treatment to large horizontal scale is discussed.

  12. An Ecosystem Model for the Simulation of Physical and Biological Oceanic Processes-IDAPAK User's Guide and Applications

    Science.gov (United States)

    McClain, Charles R.; Arrigo, Kevin; Murtugudde, Ragu; Signorini, Sergio R.; Tai, King-Sheng

    1998-01-01

    This TM describes the development, testing, and application of a 4-component (phytoplankton, zooplankton, nitrate, and ammonium) ecosystem model capable of simulating oceanic biological processes. It also reports and documents an in-house software package (Interactive Data Analysis Package - IDAPAK) for interactive data analysis of geophysical fields, including those related to the forcing, verification, and analysis of the ecosystem model. Two regions were studied in the Pacific: the Warm Pool (WP) in the Equatorial Pacific (165 deg. E at the equator) and at Ocean Weather Station P (OWS P) in the Northeast Pacific (50 deg. N, 145 deg. W). The WP results clearly indicate that the upwelling at 100 meters correlates well with surface blooms. The upwelling events in late 1987 and 1990 produced dramatic increases in the surface layer values of all 4 ecosystem components, whereas the spring-summer deep mixing events, do not seem to incur a significant response in any of the ecosystem quantities. The OWS P results show that the monthly profiles of temperature, the annual cycles of solar irradiance, and 0- to 50-m integrated nitrate accurately reproduce observed values. Annual primary production is 190 gC/m(exp 2)/yr, which is consistent with recent observations but is much greater than earlier estimates.

  13. ENSO Modulations due to Interannual Variability of Freshwater Forcing and Ocean Biology-induced Heating in the Tropical Pacific.

    Science.gov (United States)

    Zhang, Rong-Hua; Gao, Chuan; Kang, Xianbiao; Zhi, Hai; Wang, Zhanggui; Feng, Licheng

    2015-12-18

    Recent studies have identified clear climate feedbacks associated with interannual variations in freshwater forcing (FWF) and ocean biology-induced heating (OBH) in the tropical Pacific. The interrelationships among the related anomaly fields are analyzed using hybrid coupled model (HCM) simulations to illustrate their combined roles in modulating the El Niño-Southern Oscillation (ENSO). The HCM-based supporting experiments are performed to isolate the related feedbacks, with interannually varying FWF and OBH being represented individually or collectively, which allows their effects to be examined in a clear way. It is demonstrated that the interannual freshwater forcing enhances ENSO variability and slightly prolongs the simulated ENSO period, while the interannual OBH reduces ENSO variability and slightly shortens the ENSO period, with their feedback effects tending to counteract each other.

  14. Summertime calcium carbonate undersaturation in shelf waters of the western Arctic Ocean – how biological processes exacerbate the impact of ocean acidification

    OpenAIRE

    N. R. Bates; M. I. Orchowska; R. Garley; J. T. Mathis

    2013-01-01

    The Arctic Ocean accounts for only 4% of the global ocean area, but it contributes significantly to the global carbon cycle. Recent observations of seawater CO2-carbonate chemistry in shelf waters of the western Arctic Ocean, primarily in the Chukchi Sea, from 2009 to 2011 indicate that bottom waters are seasonally undersaturated with respect to calcium carbonate (CaCO3) minerals, particularly aragonite. Nearly 40% of sampled bottom waters on the shelf have saturation states...

  15. 15N natural abundance in warm-core rings of the Gulf Stream: studies of the upper-ocean nitrogen cycle

    International Nuclear Information System (INIS)

    Altabet, M.A.

    1984-01-01

    An extensive study of 15 N natural abundance in particulate organic nitrogen (PON) from warm-core rings of the Gulf Stream was carried out to test its use as an in situ tracer of the marine nitrogen cycle. Ring 82-B exhibited large temporal changes in the delta 15 N of PON. It was found that delta 15 N values for euphotic zone PON were low in April before stratification and higher in June after stratification had occurred. Below 400 meters, in the permanent thermocline, the change was opposite going from very high values to ones similar to those at the surface. Examination of vertical profiles for delta 15 N in the upper 200 meters demonstrated that in stratified waters a delta 15 N minimum for PON occurs with both the top of the nitracline and a maximum in PON concentration. Often a minimum in C/N ratio also occurs at the depth of the delta 15 N minimum. A mathematical model of nitrogen flux into and out of the euphotic zone and associated isotopic fractionation qualitatively reproduced the observed patterns for the delta 15 N of PON, PON concentration and NO 3 - concentration. Levels of PON increased as a result of either increasing NO 3 - flux into the euphotic zone or increasing the residence time of PON in the euphotic zone. These results lend general support to current views regarding the nature and significance of the vertical fluxes of nitrogen in the upper-ocean and the hypotheses presented concerning the factors which control the delta 15 N of PON

  16. Sources and fate of chromophoric dissolved organic matter and water mass ventilation in the upper Arctic Ocean

    Science.gov (United States)

    Walker, S. A.; Amon, R. M.; Stedmon, C. A.

    2011-12-01

    The majority of high latitude soil organic carbon is stored within vast permafrost regions surrounding the Arctic, which are highly susceptible to climate change. As global warming persists increased river discharge combined with permafrost erosion and extended ice free periods will increase the supply of soil organic carbon to the Arctic Ocean. Increased river discharge to the Arctic will also have a significant impact its hydrological cycle and could potentially be critical to sea ice formation. This impact is due to freshwater discharge to the Arctic which has been shown to help sustain halocline formation, a critical water mass that acts as an insulator trapping heat from inflowing Atlantic waters from ice at the surface. As the climate warms it is therefore important to identify halocline source waters and to determine fluctuations in their contribution to this critical water mass. To better understand dissolved organic matter (DOM) quality and its fate within the Arctic as well as runoff distributions across the basin the optical properties of chromophoric dissolved organic carbon (CDOM) were evaluated during a trans-Arctic expedition, AOS 2005. This cruise is unique because it is the first time fluorescence data have been obtained from all basins in the Arctic. Excitation/Emission Matrix Spectroscopy (EEM's) coupled to Parallel Factor Analysis (PARAFAC) was used to decompose the combined CDOM fluorescence signal into six independent components that can be traced to a source. Three humic-like CDOM components were isolated and linked to runoff waters using Principal Component Analysis (PCA). Inherent differences were observed between Eurasian (EB) and Canadian (CB) basin surface waters in terms of DOM quality and freshwater distributions. In EB surface waters (0-50m) the humic-like CDOM components explained roughly half of the variance in the DOC pool and were strongly related to lignin phenol concentrations. These results indicate CDOM in Trans-Polar Drift

  17. The role of biology in planetary evolution: cyanobacterial primary production in low?oxygen Proterozoic oceans

    OpenAIRE

    Hamilton, Trinity L.; Bryant, Donald A.; Macalady, Jennifer L.

    2015-01-01

    Summary Understanding the role of biology in planetary evolution remains an outstanding challenge to geobiologists. Progress towards unravelling this puzzle for Earth is hindered by the scarcity of well?preserved rocks from the Archean (4.0 to 2.5?Gyr ago) and Proterozoic (2.5 to 0.5?Gyr ago) Eons. In addition, the microscopic life that dominated Earth's biota for most of its history left a poor fossil record, consisting primarily of lithified microbial mats, rare microbial body fossils and m...

  18. Biological and associated water-quality data for lower Olmos Creek and upper San Antonio River, San Antonio, Texas, March-October 1990

    Science.gov (United States)

    Taylor, R. Lynn

    1995-01-01

    Biological and associated water-quality data were collected from lower Olmos Creek and upper San Antonio River in San Antonio, Texas, during March-October 1990, the second year of a multiyear data-collection program. The data will be used to document water-quality conditions prior to implementation of a proposal to reuse treated wastewater to irrigate city properties in Olmos Basin and Brackenridge Parks and to augment flows in the Olmos Creek/San Antonio River system.

  19. The Oceans 2015 Initiative, Part I - An updated synthesis of the observed and projected impacts of climate change on physical and biological processes in the oceans

    International Nuclear Information System (INIS)

    Howes, Ella L.; Joos, Fortunat; Eakin, Mark; Gattuso, Jean-Pierre

    2015-01-01

    The oceans have absorbed approximately 93% of the excess heat caused by global warming. Warming increases stratification, limiting the circulation of nutrients from deep waters to the surface. There is evidence that enhanced stratification and increasing temperature are causing a decline in dissolved oxygen concentration and expanding existing oxygen minimum zones (OMZs). Approximately 26% of anthropogenic CO 2 is absorbed by the oceans, resulting in a reduction in pH and carbonate ion concentration, termed ocean acidification. Anthropogenic CO 2 has caused global ocean pH to decrease by 0.1 units since the start of the Industrial Revolution. The ocean ecosystems are responding to the changing environment, but at different rates and magnitudes and with interspecific and geographic variation in responses. Warming causes shifts in species' geographic distribution, abundance, migration patterns and phenology. Organisms that produce shells and skeletons from calcium carbonate are at most risk from ocean acidification as it lowers the saturation state of the mineral, favouring a dissolution reaction. To date, there are few observations of ocean acidification effects in natural communities; however, experimental evidence suggests that the risk to ecosystems will increase over the coming decades. Decreasing dissolved oxygen concentrations and expanding OMZs will favour anaerobic metabolisers such as bacteria and small microbes whilst reducing habitat for larger, oxygen dependent organisms. The interaction of multiple drivers can amplify or alleviate each other's effects. It is likely that marine organisms will experience a combination of warming, acidification and declining oxygen concentrations as well as regionally specific local stressors. This makes it difficult to predict the responses of individual species to multiple drivers, and species interactions make ecosystem- based projections challenging. Using the available evidence, projections have been

  20. A new approach for the determination of the drag coefficient from the upper ocean response to a tropical cyclone: A feasibility study

    KAUST Repository

    Zedler, Sarah; Kanschat, Guido; Korty, Robert L.; Hoteit, Ibrahim

    2011-01-01

    forward models of the ocean's response to a tropical cyclone, whereby the probability density function of drag coefficient values as a function of wind speed that results from adding realistic levels of noise to the simulated ocean response variables

  1. Biology and life cycles of pelagic tunicates in the Lazarev Sea, Southern Ocean

    Science.gov (United States)

    Pakhomov, E. A.; Dubischar, C. D.; Hunt, B. P. V.; Strass, V.; Cisewski, B.; Siegel, V.; von Harbou, L.; Gurney, L.; Kitchener, J.; Bathmann, U.

    2011-07-01

    Four grid surveys were carried out in the top 200 m layer of the Lazarev Sea during fall 2004, summer 2005-06, winter 2006 and summer 2007-08 onboard the R.V. Polarstern as a part of the German SO-GLOBEC. The distribution, abundance and biology of two species of salps, Salpa thompsoni and Ihlea racovitzai, were investigated. With the exception of fall 2004, I. racovitzai dominated the salp community although being represented by low densities (<20 ind. 1000 m -3). S. thompsoni was scarce during the summers of 2005-06 and 2007-08 and almost absent from the region during winter 2006. Nevertheless, it was modestly numerous during fall 2004 reaching densities of up to 33 ind. 1000 m -3 in the south-western stations of the grid. The data on the seasonal population structure and life cycle of I. racovitzai showed that this species followed the generalized pattern typical of S. thompsoni, i.e. sexual/asexual reproduction and spawning during fall. I. racovitzai densities were the lowest during summer, increased during fall and peaked in during winter. Numerous offspring were produced by I. racovitzai during fall, just before the area became ice-covered. Conversely, S. thompsoni was not able to complete its life cycle in the Lazarev Sea, with a high occurrence of stage X (unfertilized) aggregates present. Highest S. thompsoni densities in summer and fall, and its disappearance in winter are indicative of a population of the expatriate origin that is sustained by advection.

  2. Investigating the turbulence response of a 1-D idealized water column located in the sub-Antarctic zone with focus on the upper ocean dynamics

    CSIR Research Space (South Africa)

    Boodhraj, Kirodh

    2017-09-01

    Full Text Available A one-dimensional ocean physical model was implemented in the sub-Antarctic Southern Ocean using the Nucleus for the European Modelling of the Ocean (NEMO) model. It was used to examine the effects of the turbulence response of the simulation...

  3. An assessment of the role of the k-e vertical mixing scheme in the simulation of Southern Ocean upper dynamics

    CSIR Research Space (South Africa)

    Boodhraj, K

    2016-11-01

    Full Text Available Following the work done by Reffrey, Calone and Bourdalle-Badie (2015) we implemented a one dimensional (1D) ocean physical model in the sub-Antarctic Southern Ocean using the Nucleus for the European Modelling of the Ocean(NEMO) model. The 1D model...

  4. Defining Essential Biodiversity Variables (EBVs) as a contribution to Essential Ocean Variables (EOVs): A Core Task of the Marine Biodiversity Observation Network (MBON) to Accelerate Integration of Biological Observations in the Global Ocean Observing System (GOOS)

    Science.gov (United States)

    Pearlman, J.; Muller-Karger, F. E.; Sousa Pinto, I.; Costello, M. J.; Duffy, J. E.; Appeltans, W.; Fischer, A. S.; Canonico, G.; Klein, E.; Obura, D.; Montes, E.; Miloslavich, P.; Howard, M.

    2017-12-01

    The Marine Biodiversity Observation Network (MBON) is a networking effort under the umbrella of the Group on Earth Observations Biodiversity Observation Network (GEO BON). The objective of the MBON is to link existing groups engaged in ocean observation and help define practical indices to deploy in an operational manner to track changes in the number of marine species, the abundance and biomass of marine organisms, the diverse interactions between organisms and the environment, and the variability and change of specific habitats of interest. MBON serves as the biodiversity arm of Blue Planet, the initiative of the Group on Earth Observations (GEO) for the benefit of society. The Global Ocean Observing System (GOOS) was established under the auspices of the Intergovernmental Oceanographic Commission (IOC) in 1991 to organize international ocean observing efforts. The mission of the GOOS is to support monitoring to improve the management of marine and coastal ecosystems and resources, and to enable scientific research. GOOS is engaged in a continuing, rigorous process of identifying Essential Ocean Variables (EOVs). MBON is working with GOOS and the Ocean Biogeographic Information System (OBIS, also under the IOC) to define Essential Biodiversity Variables (EBVs) as those Essential Ocean Variables (EOVs) that have explicit taxonomic records associated with them. For practical purposes, EBVs are a subset of the EOVs. The focus is to promote the integration of biological EOVs including EBVs into the existing and planned national and international ocean observing systems. The definition avoids a proliferation of 'essential' variables across multiple organizations. MBON will continue to advance practical and wide use of EBVs and related EOV. This is an effective way to contribute to several UN assessments (e.g., from IPBES, IPCC, and the World Ocean Assessment under the UN Regular Process), UN Sustainable Development Goals, and to address targets and goals defined under

  5. An isopycnic ocean carbon cycle model

    Directory of Open Access Journals (Sweden)

    K. M. Assmann

    2010-02-01

    Full Text Available The carbon cycle is a major forcing component in the global climate system. Modelling studies, aiming to explain recent and past climatic changes and to project future ones, increasingly include the interaction between the physical and biogeochemical systems. Their ocean components are generally z-coordinate models that are conceptually easy to use but that employ a vertical coordinate that is alien to the real ocean structure. Here, we present first results from a newly-developed isopycnic carbon cycle model and demonstrate the viability of using an isopycnic physical component for this purpose. As expected, the model represents well the interior ocean transport of biogeochemical tracers and produces realistic tracer distributions. Difficulties in employing a purely isopycnic coordinate lie mainly in the treatment of the surface boundary layer which is often represented by a bulk mixed layer. The most significant adjustments of the ocean biogeochemistry model HAMOCC, for use with an isopycnic coordinate, were in the representation of upper ocean biological production. We present a series of sensitivity studies exploring the effect of changes in biogeochemical and physical processes on export production and nutrient distribution. Apart from giving us pointers for further model development, they highlight the importance of preformed nutrient distributions in the Southern Ocean for global nutrient distributions. The sensitivity studies show that iron limitation for biological particle production, the treatment of light penetration for biological production, and the role of diapycnal mixing result in significant changes of nutrient distributions and liniting factors of biological production.

  6. Biological responses of two marine organisms of ecological relevance to on-going ocean acidification and global warming.

    Science.gov (United States)

    Gomiero, A; Bellerby, R G J; Manca Zeichen, M; Babbini, L; Viarengo, A

    2018-05-01

    Recently, there has been a growing concern that climate change may rapidly and extensively alter global ecosystems with unknown consequences for terrestrial and aquatic life. While considerable emphasis has been placed on terrestrial ecology consequences, aquatic environments have received relatively little attention. Limited knowledge is available on the biological effects of increments of seawater temperature and pH decrements on key ecological species, i.e., primary producers and/or organisms representative of the basis of the trophic web. In the present study, we addressed the biological effects of global warming and ocean acidification on two model organisms, the microbenthic marine ciliate Euplotes crassus and the green alga Dunaliella tertiocleta using a suite of high level ecological endpoint tests and sub-lethal stress measures. Organisms were exposed to combinations of pH and temperature (TR1: 7.9 [pH], 25.5 °C and TR2: 7.8 [pH], 27,0 °C) simulating two possible environmental scenarios predicted to occur in the habitats of the selected species before the end of this century. The outcomes of the present study showed that the tested scenarios did not induce a significant increment of mortality on protozoa. Under the most severe exposure conditions, sub-lethal stress indices show that pH homeostatic mechanisms have energetic costs that divert energy from essential cellular processes and functions. The marine protozoan exhibited significant impairment of the lysosomal compartment and early signs of oxidative stress under these conditions. Similarly, significant impairment of photosynthetic efficiency and an increment in lipid peroxidation were observed in the autotroph model organism held under the most extreme exposure condition tested. Copyright © 2018 Elsevier Ltd. All rights reserved.

  7. Ocean Uses: California

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This Ocean Uses Atlas Project is an innovative partnership between NOAA's National Marine Protected Areas Center and Marine Conservation Biology Institute. The...

  8. Biodiversity's big wet secret: the global distribution of marine biological records reveals chronic under-exploration of the deep pelagic ocean.

    Directory of Open Access Journals (Sweden)

    Thomas J Webb

    Full Text Available BACKGROUND: Understanding the distribution of marine biodiversity is a crucial first step towards the effective and sustainable management of marine ecosystems. Recent efforts to collate location records from marine surveys enable us to assemble a global picture of recorded marine biodiversity. They also effectively highlight gaps in our knowledge of particular marine regions. In particular, the deep pelagic ocean--the largest biome on Earth--is chronically under-represented in global databases of marine biodiversity. METHODOLOGY/PRINCIPAL FINDINGS: We use data from the Ocean Biogeographic Information System to plot the position in the water column of ca 7 million records of marine species occurrences. Records from relatively shallow waters dominate this global picture of recorded marine biodiversity. In addition, standardising the number of records from regions of the ocean differing in depth reveals that regardless of ocean depth, most records come either from surface waters or the sea bed. Midwater biodiversity is drastically under-represented. CONCLUSIONS/SIGNIFICANCE: The deep pelagic ocean is the largest habitat by volume on Earth, yet it remains biodiversity's big wet secret, as it is hugely under-represented in global databases of marine biological records. Given both its value in the provision of a range of ecosystem services, and its vulnerability to threats including overfishing and climate change, there is a pressing need to increase our knowledge of Earth's largest ecosystem.

  9. Environmental regulation of plant gene expression: an RT-qPCR laboratory project for an upper-level undergraduate biochemistry or molecular biology course.

    Science.gov (United States)

    Eickelberg, Garrett J; Fisher, Alison J

    2013-01-01

    We present a novel laboratory project employing "real-time" RT-qPCR to measure the effect of environment on the expression of the FLOWERING LOCUS C gene, a key regulator of floral timing in Arabidopsis thaliana plants. The project requires four 3-hr laboratory sessions and is aimed at upper-level undergraduate students in biochemistry or molecular biology courses. The project provides students with hands-on experience with RT-qPCR, the current "gold standard" for gene expression analysis, including detailed data analysis using the common 2-ΔΔCT method. Moreover, it provides a convenient starting point for many inquiry-driven projects addressing diverse questions concerning ecological biochemistry, naturally occurring genetic variation, developmental biology, and the regulation of gene expression in nature. Copyright © 2013 Wiley Periodicals, Inc.

  10. Critical thinking in Norwegian upper secondary biology education: The cases of complementary-alternative-medicine and health claims in the media

    Directory of Open Access Journals (Sweden)

    Sverre Pettersen

    2005-11-01

    Full Text Available By definition, complementary alternative medicine (CAM treatments are not scientifically proven. Scientific deficient health claiming news seems to flourish in the media. The aims of this questionnaire study was to explore: (1 attitudes towards CAM among 3rd year students of the health sciences in Norway, who either have immersed themselves in the 2nd and 3rd year upper secondary biology courses, or taken the 1st year compulsory natural science course, exclusively, and (2 these students’ skills in requesting for scientific information in highly deficient health news briefs. There were no significant differences in the frequencies of positive attitude towards the use of CAM treatments between the two health sciences student categories, and most students in both categories “failed” in the test set out to measure their skills in requesting for scientific information in four highly scientific deficient health news briefs. The results suggest that teaching of the Norwegian upper secondary biology courses does probably not contribute extensively to pupils’ development of scepticism towards CAM, and skills in evaluating health claims, scientifically.

  11. Observed intra-seasonal to interannual variability of the upper ocean thermal structure in the southeastern Arabian Sea during 2002-2008

    Digital Repository Service at National Institute of Oceanography (India)

    Gopalakrishna, V.V.; Durand, F.; Nisha, K.; Lengaigne, M.; Boyer, T.P; Costa, J.; Rao, R.R.; Ravichandran, M.; Amrithash, S.; John, L.; Girish, K.; Ravichandran, C.; Suneel, V.

    in the Arabian Sea. Deep Sea Res. II, 49, 12, 2231–2264. Gill, A. E., 1982. Atmosphere-Ocean Dynamics, Volume 30, Academic Press, 662 pp. Graham, N. E., Barnet, T.P., 1987. Sea surface temperature, surface wind divergence and convection over tropical oceans...003631 Locarnini, R. A., Mishonov, A. V., Antonov, J. I., Boyer, T. P., Garcia, H. E., 2006. World Ocean Atlas 2005, Volume 1: Temperature, S. Levitus, Ed. NOAA Atlas NESDIS 61, U.S. Government Printing Office, Washington, D.C., 182. Masson, S., Luo...

  12. Development of a Semester-Long, Inquiry-Based Laboratory Course in Upper-Level Biochemistry and Molecular Biology

    Science.gov (United States)

    Murthy, Pushpalatha P. N.; Thompson, Martin; Hungwe, Kedmon

    2014-01-01

    A semester-long laboratory course was designed and implemented to familiarize students with modern biochemistry and molecular biology techniques. The designed format involved active student participation, evaluation of data, and critical thinking, and guided students to become independent researchers. The first part of the course focused on…

  13. Seasonal variability of upper-layer geostrophic transport in the tropical Indian Ocean during 1992-1996 along TOGA-I XBT tracklines

    Digital Repository Service at National Institute of Oceanography (India)

    Murty, V.S.N.; Sarma, M.S.S.; Lambata, B.P.; Gopalakrishna, V.V.; Pednekar, S.M.; Rao, A.S.; Luis, A.J.; Kaka, A.R.; Rao, L.V.G.

    (2000) 1569}1582 1581 Subrahmanyam, B., 1998. A study of the Indian Ocean Circulation using satellite observations and model simulations. Ph.D. Thesis. University of Southampton, Department of Oceanography, UK., p. 251, unpublished. Suryanarayana, A...

  14. Biological assessment of marine resources for the Republic of the Maldives, Indian Ocean, August, 2001 (NODC Accession 0000670)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In August 2001, biologists from the U.S. Fish and Wildlife Service and the National Marine Fisheries Service were asked to conduct an assessment of the national...

  15. Effects of socioscientific issues-based instruction on argumentation ability and biology concepts of upper secondary school students

    Science.gov (United States)

    Faelt, Surasak; Samiphak, Sara; Pattaradilokrat, Sittiporn

    2018-01-01

    Argumentation skill is an essential skill needed in students, and one of the competencies in scientific literacy. Through arguing on socioscientific issues, students may gain deeper conceptual understanding. The purpose of this research is to examine the efficacy of a socioscientific issues-based instruction compared with an inquirybased instruction. This is to determine which one is better in promoting 10th grade students' argumentation ability and biology concepts of digestive system and cellular respiration. The forty 10th grade students included in this study were from two mathematics-science program classes in a medium-sized secondary school located in a suburb of Buriram province, Thailand. The research utilizes a quasi-experimental design; pre-test post-test control group design. We developed and implemented 4 lesson plans for both socioscientific issues-based instruction and inquiry-based instruction. Ten weeks were used to collect the data. A paper-based questionnaire and informal interviews were designed to test students' argumentation ability, and the two-tier multiple-choice test was designed to test their biology concepts. This research explore qualitatively and quantitatively students' argumentation abilities and biology concepts, using arithmetic mean, mean of percentage, standard deviation and t-test. Results show that there is no significant difference between the two group regarding mean scores of the argumentation ability. However, there is significant difference between the two groups regarding mean scores of the biology concepts. This suggests that socioscientific issues-based instruction could be used to improve students' biology concepts.

  16. Transforming Ocean Observations of the Carbon Budget, Acidification, Hypoxia, Nutrients, and Biological Productivity: a Global Array of Biogeochemical Argo Floats

    Science.gov (United States)

    Talley, L. D.; Johnson, K. S.; Claustre, H.; Boss, E.; Emerson, S. R.; Westberry, T. K.; Sarmiento, J. L.; Mazloff, M. R.; Riser, S.; Russell, J. L.

    2017-12-01

    Our ability to detect changes in biogeochemical (BGC) processes in the ocean that may be driven by increasing atmospheric CO2, as well as by natural climate variability, is greatly hindered by undersampling in vast areas of the open ocean. Argo is a major international program that measures ocean heat content and salinity with about 4000 floats distributed throughout the ocean, profiling to 2000 m every 10 days. Extending this approach to a global BGC-Argo float array, using recent, proven sensor technology, and in close synergy with satellite systems, will drive a transformative shift in observing and predicting the effects of climate change on ocean metabolism, carbon uptake, acidification, deoxygenation, and living marine resource management. BGC-Argo will add sensors for pH, oxygen, nitrate, chlorophyll, suspended particles, and downwelling irradiance, with sufficient accuracy for climate studies. Observing System Simulation Experiments (OSSEs) using BGC models indicate that 1000 BGC floats would provide sufficient coverage, hence equipping 1/4 of the Argo array. BGC-Argo (http://biogeochemical-argo.org) will enhance current sustained observational programs such as Argo, GO-SHIP, and long-term ocean time series. BGC-Argo will benefit from deployments on GO-SHIP vessels, which provide sensor verification. Empirically derived algorithms that relate the observed BGC float parameters to the carbon system parameters will provide global information on seasonal ocean-atmosphere carbon exchange. BGC Argo measurements could be paired with other emerging technology, such as pCO2 measurements from ships of opportunity and wave gliders, to extend and validate exchange estimates. BGC-Argo prototype programs already show the potential of a global observing system that can measure seasonal to decadal variability. Various countries have developed regional BGC arrays: Southern Ocean (SOCCOM), North Atlantic Subpolar Gyre (remOcean), Mediterranean (NAOS), the Kuroshio (INBOX

  17. Preliminary characterization and biological reduction of putative biogenic iron oxides (BIOS) from the Tonga-Kermadec Arc, southwest Pacific Ocean.

    Science.gov (United States)

    Langley, S; Igric, P; Takahashi, Y; Sakai, Y; Fortin, D; Hannington, M D; Schwarz-Schampera, U

    2009-01-01

    Sediment samples were obtained from areas of diffuse hydrothermal venting along the seabed in the Tonga sector of the Tonga-Kermadec Arc, southwest Pacific Ocean. Sediments from Volcano 1 and Volcano 19 were analyzed by X-ray diffraction (XRD) and found to be composed primarily of the iron oxyhydroxide mineral, two-line ferrihydrite. XRD also suggested the possible presence of minor amounts of more ordered iron (hydr)oxides (including six-line ferrihydrite, goethite/lepidocrocite and magnetite) in the biogenic iron oxides (BIOS) from Volcano 1; however, Mössbauer spectroscopy failed to detect any mineral phases more crystalline than two-line ferrihydrite. The minerals were precipitated on the surfaces of abundant filamentous microbial structures. Morphologically, some of these structures were similar in appearance to the known iron-oxidizing genus Mariprofundus spp., suggesting that the sediments are composed of biogenic iron oxides. At Volcano 19, an areally extensive, active vent field, the microbial cells appeared to be responsible for the formation of cohesive chimney-like structures of iron oxyhydroxide, 2-3 m in height, whereas at Volcano 1, an older vent field, no chimney-like structures were apparent. Iron reduction of the sediment material (i.e. BIOS) by Shewanella putrefaciens CN32 was measured, in vitro, as the ratio of [total Fe(II)]:[total Fe]. From this parameter, reduction rates were calculated for Volcano 1 BIOS (0.0521 day(-1)), Volcano 19 BIOS (0.0473 day(-1)), and hydrous ferric oxide, a synthetic two-line ferrihydrite (0.0224 day(-1)). Sediments from both BIOS sites were more easily reduced than synthetic ferrihydrite, which suggests that the decrease in effective surface area of the minerals within the sediments (due to the presence of the organic component) does not inhibit subsequent microbial reduction. These results indicate that natural, marine BIOS are easily reduced in the presence of dissimilatory iron-reducing bacteria, and that the

  18. Underway biological, meteorological, navigational, physical, profile and time series data collected aboard NOAA Ship Henry B. Bigelow in the North Atlantic Ocean from 2016-05-06 to 2016-06-05 (NCEI Accession 0153543)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NCEI Accession 0153543 contains raw underway biological, meteorological, navigational, physical, profile and time series data logged by the Scientific Computer...

  19. Chemical and biological data collected as part of the CArbon Retention In A Colored Ocean (CARIACO) program in the Cariaco Basin off the coast of Venezuela, May 23, 2005 - November 11, 2006 (NODC Accession 0038513)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Chemical and biological data were collected using bottle casts on the continental shelf of Venezuela from the HERMANO GINES from May 23, 2005 to November 11, 2006....

  20. Chemical and biological data collected as part of the CArbon Retention In A Colored Ocean (CARIACO) program in the Cariaco Basin off the coast of Venezuela, January 17, 2005 - January 16, 2006 (NODC Accession 0013170)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Chemical and biological data were collected using bottle casts on the continental shelf of Venezuela from the HERMANO GINES from January 17, 2005 to January 16,...

  1. Underway biological, meteorological, navigational, physical, profile and time series data collected aboard NOAA Ship Henry B. Bigelow in the North Atlantic Ocean from 2015-03-13 to 2015-05-07 (NCEI Accession 0128346)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0128346 contains raw underway biological, meteorological, navigational, physical, profile and time series data logged by the Scientific Computer...

  2. Physical, chemical and biological profile data collected aboard the vessel HERMANO GINES in support of the Carbon Retention in A Colored Ocean (CARIACO) project in the Caribbean Sea from October 9, 2001 to July 8, 2003 (NODC Accession 0001345)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Physical, chemical and biological profile data collected using bottle and CTD casts aboard the vessel HERMANO GINES by the Fundacion La Salle (Venezuela) in support...

  3. Underway biological, meteorological, navigational, physical, profile and time series data collected aboard NOAA Ship Henry B. Bigelow in the North Atlantic Ocean from 2014-03-31 to 2014-05-23 (NODC Accession 0119096)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0119096 contains raw underway biological, meteorological, navigational, physical, profile and time series data logged by the Scientific Computer...

  4. Underway biological, meteorological, navigational, physical, profile and time series data collected aboard NOAA Ship Henry B. Bigelow in the North Atlantic Ocean from 2015-09-01 to 2015-11-06 (NCEI Accession 0132052)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0132052 contains raw underway biological, meteorological, navigational, physical, profile and time series data logged by the Scientific Computer...

  5. Underway biological, meteorological, navigational, physical, profile and time series data collected aboard NOAA Ship Henry B. Bigelow in the North Atlantic Ocean from 2016-09-07 to 2016-09-23 (NCEI Accession 0164080)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NCEI Accession 0164080 contains raw underway biological, meteorological, navigational, physical, profile and time series data logged by the Scientific Computer...

  6. Underway biological, meteorological, navigational, physical, profile and time series data collected aboard NOAA Ship Henry B. Bigelow in the Bay of Fundy and North Atlantic Ocean from 2014-09-07 to 2014-11-13 (NODC Accession 0123520)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0123520 contains raw underway biological, meteorological, navigational, physical, profile and time series data logged by the Scientific Computer...

  7. Underway biological, meteorological, navigational, physical, profile and time series data collected aboard NOAA Ship Henry B. Bigelow in the North Atlantic Ocean from 2017-03-28 to 2017-04-27 (NCEI Accession 0164797)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NCEI Accession 0164797 contains raw underway biological, meteorological, navigational, physical, profile and time series data logged by the Scientific Computer...

  8. SOME BIOLOGICAL ASPECTS OF SCALLOPED HAMMERHEAD SHARKS (Sphyrna lewini Griffith & Smith, 1834 CAUGHT FROM COASTAL FISHERIES IN THE EASTERN INDIAN OCEAN

    Directory of Open Access Journals (Sweden)

    Umi Chodrijah

    2015-12-01

    Full Text Available Indonesia has the largest chondrichthyan fishery in the world, with a reported of 105,000 and 118,000 tonnes landed in 2002 and 2003 respectively. Scalloped hammerhead shark was either targeted or by-catch from this fishery, mostly for its fins. Despite of the growing concern around the world, the availability of biological data of this species, especially in the Eastern Indian Ocean is still lacking. The objectives of this paper are to present some biological information (size composition and sex ratio of the scalloped hammerhead, from coastal fisheries in Eastern Indian Ocean. The data used for the analysis comprised of two components, i.e. survey data in 2010 (February, March, June, August, October and December and data from daily monitoring shark landing in 2013 (January to December. Substantially lower mean size, more immature sharks and more frequent of female caught over years showed that scalloped hammerhead shark in the Eastern Indian Ocean are facing intensive fishing pressure which could lead to overfishing. This could harm the sustainability of scalloped hammerhead shark resource in the long run. The relationship between clasper length and total length was positively correlated where every 5 cmTL increment on clasper length adding 51 cmTL on total length.

  9. Advancing Marine Biological Observations and Data Requirements of the Complementary Essential Ocean Variables (EOVs and Essential Biodiversity Variables (EBVs Frameworks

    Directory of Open Access Journals (Sweden)

    Frank E. Muller-Karger

    2018-06-01

    Full Text Available Measurements of the status and trends of key indicators for the ocean and marine life are required to inform policy and management in the context of growing human uses of marine resources, coastal development, and climate change. Two synergistic efforts identify specific priority variables for monitoring: Essential Ocean Variables (EOVs through the Global Ocean Observing System (GOOS, and Essential Biodiversity Variables (EBVs from the Group on Earth Observations Biodiversity Observation Network (GEO BON (see Data Sheet 1 in Supplementary Materials for a glossary of acronyms. Both systems support reporting against internationally agreed conventions and treaties. GOOS, established under the auspices of the Intergovernmental Oceanographic Commission (IOC, plays a leading role in coordinating global monitoring of the ocean and in the definition of EOVs. GEO BON is a global biodiversity observation network that coordinates observations to enhance management of the world's biodiversity and promote both the awareness and accounting of ecosystem services. Convergence and agreement between these two efforts are required to streamline existing and new marine observation programs to advance scientific knowledge effectively and to support the sustainable use and management of ocean spaces and resources. In this context, the Marine Biodiversity Observation Network (MBON, a thematic component of GEO BON, is collaborating with GOOS, the Ocean Biogeographic Information System (OBIS, and the Integrated Marine Biosphere Research (IMBeR project to ensure that EBVs and EOVs are complementary, representing alternative uses of a common set of scientific measurements. This work is informed by the Joint Technical Commission for Oceanography and Marine Meteorology (JCOMM, an intergovernmental body of technical experts that helps international coordination on best practices for observing, data management and services, combined with capacity development expertise

  10. The use of writing assignments to help students synthesize content in upper-level undergraduate biology courses.

    Science.gov (United States)

    Sparks-Thissen, Rebecca L

    2017-02-01

    Biology education is undergoing a transformation toward a more student-centered, inquiry-driven classroom. Many educators have designed engaging assignments that are designed to help undergraduate students gain exposure to the scientific process and data analysis. One of these types of assignments is use of a grant proposal assignment. Many instructors have used these assignments in lecture-based courses to help students process information in the literature and apply that information to a novel problem such as design of an antiviral drug or a vaccine. These assignments have been helpful in engaging students in the scientific process in the absence of an inquiry-driven laboratory. This commentary discusses the application of these grant proposal writing assignments to undergraduate biology courses. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  11. Biological, chemical, physical and time series data collected from station WQB04 by University of Hawai'i at Hilo and assembled by Pacific Islands Ocean Observing System (PacIOOS) in the North Pacific Ocean from 2010-10-23 to 2016-12-31 (NCEI Accession 0161523)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NCEI Accession 0161523 contains biological, chemical, physical and time series data in netCDF formatted files, which follow the Climate and Forecast metadata...

  12. The biological assessment of flora and fauna as standards for changes in the near-shore ocean environment: a study of Barbers Point Harbor.

    Science.gov (United States)

    Hokama, Y; Wachi, K M; Shiraki, A; Goo, C; Ebesu, J S

    2001-02-01

    The biological assessments of the flora and fauna in the near-shore ocean environment, specifically Barbers Point Harbor (BPH), demonstrate the usefulness of these biological analyses for evaluation of the changes occurring following man-made excavation for expansion of the harbor. The study included identification and enumeration of macroalgae and dinoflagellates and analyses of herbivores and carnivores in four areas within the perimeter of the harbor and the north and south entrances into the harbor. Numbers of macroalgae varied between 1994 and 1999 surveys, with significant decrease in numbers in stations C, D and E. Stations A and B were similar between 1994 and 1999 with a slight increase in 1999. The significant differences were shown with the appearance of Gambierdiscus toxicus (G toxicus) in 1999 among the algae in stations A and B. Assessment of herbivores and carnivores with the immunological membrane immunobead assay using monoclonal antibody to ciguatoxin and related polyethers demonstrated an increase in fish toxicity among the herbivore from 1994-1999 (22% increase) with a decrease (22%) in non-toxic fish. This was also demonstrated in the carnivores, but to a lesser degree. It is suggested that the biological analyses of the flora and the fauna of the near-shore ocean environment are appropriate to assess the changes that occur from natural and man-made alterations.

  13. Historical and future trends in ocean climate and biogeochemistry

    International Nuclear Information System (INIS)

    Doney, Scott C.; Bopp, Laurent; Long, Matthew C.

    2014-01-01

    Changing atmospheric composition due to human activities, primarily carbon dioxide (CO 2 ) emissions from fossil fuel burning, is already impacting ocean circulation, biogeochemistry, and ecology, and model projections indicate that observed trends will continue or even accelerate over this century. Elevated atmospheric CO 2 alters Earth's radiative balance, leading to global-scale warming and climate change. The ocean stores the majority of resulting anomalous heat, which in turn drives other physical, chemical, and biological impacts. Sea surface warming and increased ocean vertical stratification are projected to reduce global-integrated primary production and export flux as well as to lower subsurface dissolved oxygen concentrations. Upper trophic levels will be affected both directly by warming and indirectly from changes in productivity and expanding low oxygen zones. The ocean also absorbs roughly one-quarter of present-day anthropogenic CO 2 emissions. The resulting changes in seawater chemistry, termed ocean acidification, include declining pH and saturation state for calcium carbon minerals that may have widespread impacts on many marine organisms. Climate warming will likely slow ocean CO 2 uptake but is not expected to significantly reduce upper ocean acidification. Improving the accuracy of future model projections requires better observational constraints on current rates of ocean change and a better understanding of the mechanisms controlling key physical and biogeochemical processes. (authors)

  14. Vertical distribution of temperature, salinity and density in the upper 500 metres of the north equatorial Indian Ocean during the north-east monsoon period

    Digital Repository Service at National Institute of Oceanography (India)

    Rao, L.V.G.; Jayaraman, R.

    In the 4th and 5th scientific cruises of INS KISTNA under the Indian Programme of IIOE, five sections were worked out in the North Equatorial Indian Ocean during Jan-Feb 1963. Using the physical oceanographic data collected in these cruises...

  15. Understanding the Transport of Patagonian Dust and Its Influence on Marine Biological Activity in the South Atlantic Ocean

    Science.gov (United States)

    Johnson, Matthew; Meskhidze, Nicholas; Kiliyanpilakkil, Praju; Gasso, Santiago

    2010-01-01

    Modeling and remote sensing techniques were applied to examine the horizontal and vertical transport pathways of Patagonian dust and quantify the effect of soluble-iron- laden mineral dust deposition on marine primary productivity in the South Atlantic Ocean (SAO) surface waters. The global chemistry transport model GEOS-Chem, implemented with an iron dissolution scheme, was applied to evaluate the atmospheric transport and deposition of mineral dust and bioavailable iron during two dust outbreaks originating in the source regions of Patagonia. In addition to this "rapidly released" iron, offline calculations were also carried out to estimate the amount of bioavailable iron leached during the residence time of dust in the ocean mixed layer. Model simulations showed that the horizontal and vertical transport pathways of Patagonian dust plumes were largely influenced by the synoptic meteorological patterns of high and low pressure systems. Model-predicted horizontal and vertical transport pathways of Patagonian dust over the SAO were in reasonable agreement with remotely-sensed data. Comparison between remotely-sensed and offline calculated ocean surface chlorophyll-a concentrations indicated that, for the two dust outbreaks examined in this study, the deposition of bioavailable iron in the SAO through atmospheric pathways was insignificant. As the two dust transport episodes examined here represent typical outflows of mineral dust from South American sources, our study suggests that the atmospheric deposition of mineral dust is unlikely to induce large scale marine primary productivity and carbon sequestration in the South Atlantic sector of the Southern Ocean.

  16. Petrology and geochemistry of the high-Cr podiform chromitites of the Köycegiz ophiolite, southwest Turkey: implications for the multi-stage evolution of the oceanic upper mantle

    Science.gov (United States)

    Xiong, Fahui; Yang, Jingsui; Dilek, Yildirim; Wang, ChunLian; Hao, Xiaolin; Xu, Xiangzhen; Lian, Dongyang

    2018-03-01

    Ophiolites exposed across the western Tauride belt in Turkey represent tectonically emplaced fragments of oceanic lithosphere obducted onto the continental margin following the closure of the Neotethys Ocean during the Late Cretaceous. The ultramafic massif of Köycegiz, which is located in the ophiolitic belt of southwestern Turkey, is a major source of metallurgical chromitite ore. The massif comprises a base of tectonized harzburgite with minor dunite overlain by a magmatic sequence of wehrlite, pyroxenite, troctolite and gabbro. Only sparse refractory chromitites occur within the harzburgites; in contrast, the upper and middle sections of the peridotite sequence contain abundant metallurgical chromitites. The peridotites record abundant evidence of mantle metasomatism on various scales, as the Fo values of olivine in harzburgite are 90.1-95.4, whereas those in dunite are 90.1-91.8. The compositions of the melts passing through the peridotites changed gradually from arc tholeiite to boninite due to melt-rock reactions, thus producing more Cr-rich chromitites in the upper part of the body. Most of the chromitites have high Cr numbers (77-78), although systematic changes in the compositions of the olivine and chromian spinel occur from the harzburgites to the dunite envelopes to the chromitites, reflecting melt-rock reactions. The calculated ΔlogfO2 (FMQ) values range from - 2.77 to + 1.03 in the chromitites, - 2.73 to -0.01 in the harzburgites, and - 1.65 to + 0.45 in the dunites. All of the available evidence suggests that the Köycegiz ophiolite formed in a supra-subduction zone (SSZ) mantle wedge. These models indicate that the harzburgites represent the products of first-stage melting and low degrees of melt-rock interaction that occurred in a mid-ocean ridge (MOR) environment. In contrast, the chromitites and dunites represent the products of second-stage melting and related refertilization, which occurred in an SSZ environment.

  17. Astronomical calibration of upper Campanian–Maastrichtian carbon isotope events and calcareous plankton biostratigraphy in the Indian Ocean (ODP Hole 762C)

    DEFF Research Database (Denmark)

    Thibault, Nicolas Rudolph; Husson, Dorothée; Harlou, Rikke

    2012-01-01

    An integrated framework of magnetostratigraphy, calcareous microfossil bio-events, cyclostratigraphy and d13C stratigraphy is established for the upper Campanian–Maastrichtian of ODP Hole 762C (Exmouth Plateau, Northwestern Australian margin). Bulk-carbonate d13C events and nannofossil bio-events...

  18. Complementary Constraints from Carbon (13C) and Nitrogen (15N) Isotopes on the Efficiency of the Glacial Ocean's Soft-Tissue Biological Pump

    Science.gov (United States)

    Schmittner, A.; Somes, C. J.

    2016-12-01

    A three-dimensional, process-based model of the ocean's carbon and nitrogen cycles, including 13C and 15N isotopes, is used to explore effects of idealized changes in the soft-tissue biological pump. Results are presented from one preindustrial control run and six simulations of the Last Glacial Maximum (LGM) with increasing values of the spatially constant maximum phytoplankton growth rate μmax, which mimicks iron fertilization. The default LGM simulation, without increasing μmax and with a shallower and weaker Atlantic Meridional Overturning Circulation and increased sea ice cover, leads to 280 Pg more respired organic carbon (Corg) than the pre-industrial control. Dissolved oxygen in the thermocline increase, which reduces water column denitrification and nitrogen fixation, thus increasing the ocean's fixed nitrogen inventory and decreasing δ15NNO3. This simulation already fits observed carbon and nitrogen isotopes relatively well, but it overestimates deep ocean δ13CDIC and underestimates δ15NNO3 at high latitudes. Increasing μmax enhances Corg and lowers deep ocean δ13CDIC, improving the fit. Modest increases in μmax result in higher subpolar δ15NNO3 due to enhanced local nutrient utilization, and better agreement with reconstructions. Large increases in nutrient utilization are inconsistent with nitrogen isotopes although they still fit the carbon isotopes reasonably well. The best fitting models with modest increases in μmax reproduce major features of the glacial δ13CDIC, δ15N, and oxygen reconstructions while simulating increased Corg by 510-670 Pg. These results are consistent with the idea that the soft-tissue pump was more efficient during the LGM. Both circulation and biological nutrient utilization contribute. However, these conclusions are preliminary given our idealized experiments, which do not consider changes in benthic denitrification and spatially inhomogenous changes in aeolian iron fluxes. The analysis illustrates interactions

  19. Multi-proxy approach (Thorium-234, excess Barium) of export and remineralisation fluxes of carbon and biogenic elements associated with the oceanic biological pump

    International Nuclear Information System (INIS)

    Lemaitre, Nolwenn

    2017-01-01

    The main objective of this thesis is to improve our understanding of the different controls that affect the oceanic biological carbon pump. Particulate export and remineralisation fluxes were investigated using the thorium-234 ( 234 Th) and biogenic barium (Baxs) proxies. In the North Atlantic, the highest particulate organic carbon (POC) export fluxes were associated to biogenic (biogenic silica or calcium carbonate) and lithogenic minerals, ballasting the particles. Export efficiency was generally low (≤ 10%) and inversely related to primary production, highlighting a phase lag between production and export. The highest transfer efficiencies, i.e. the fraction of POC that reached 400 m, were driven by sinking particles ballasted by calcite or lithogenic minerals. The regional variation of meso-pelagic remineralisation was attributed to changes in bloom intensity, phytoplankton cell size, community structure and physical forcing (down-welling). Carbon remineralisation balanced, or even exceeded, POC export, highlighting the impact of meso-pelagic remineralisation on the biological pump with a near-zero, deep carbon sequestration for spring 2014. Export of trace metals appeared strongly influenced by lithogenic material advected from the margins. However, at open ocean stations not influenced by lithogenic matter, trace metal export rather depended on phytoplankton activity and biomass. A last part of this work focused on export of biogenic silica, particulate nitrogen and iron near the Kerguelen Island. This area is characterized by a natural iron-fertilization that increases export fluxes. Inside the fertilized area, flux variability is related to phytoplankton community composition. (author)

  20. Volcanic ash supply to the surface ocean – remote sensing of biological responses and their wider biogeochemical significance

    Directory of Open Access Journals (Sweden)

    Thomas J. Browning

    2015-03-01

    Full Text Available Transient micronutrient enrichment of the surface ocean can enhance phytoplankton growth rates and alter microbial community structure with an ensuing spectrum of biogeochemical feedbacks. Strong phytoplankton responses to micronutrients supplied by volcanic ash have been reported recently. Here we: (i synthesize findings from these recent studies; (ii report the results of a new remote sensing study of ash fertilization; and (iii calculate theoretical bounds of ash-fertilized carbon export. Our synthesis highlights that phytoplankton responses to ash do not always simply mimic that of iron amendment; the exact mechanisms for this are likely biogeochemically important but are not yet well understood. Inherent optical properties of ash-loaded seawater suggest rhyolitic ash biases routine satellite chlorophyll-a estimation upwards by more than an order of magnitude for waters with 0.5 mg chlorophyll-a m-3. For this reason post-ash-deposition chlorophyll-a changes in oligotrophic waters detected via standard Case 1 (open ocean algorithms should be interpreted with caution. Remote sensing analysis of historic events with a bias less than a factor of 2 provided limited stand-alone evidence for ash-fertilization. Confounding factors were poor coverage, incoherent ash dispersal, and ambiguity ascribing biomass changes to ash supply over other potential drivers. Using current estimates of iron release and carbon export efficiencies, uncertainty bounds of ash-fertilized carbon export for 3 events are presented. Patagonian iron supply to the Southern Ocean from volcanic eruptions is less than that of windblown dust on thousand year timescales but can dominate supply at shorter timescales. Reducing uncertainties in remote sensing of phytoplankton response and nutrient release from ash are avenues for enabling assessment of the oceanic response to large-scale transient nutrient enrichment.

  1. Structure of the oceanic lithosphere and upper mantle north of the Gloria Fault in the eastern mid-Atlantic by receiver function analysis

    Science.gov (United States)

    Hannemann, Katrin; Krüger, Frank; Dahm, Torsten; Lange, Dietrich

    2017-10-01

    Receiver functions (RF) have been used for several decades to study structures beneath seismic stations. Although most available stations are deployed on shore, the number of ocean bottom station (OBS) experiments has increased in recent years. Almost all OBSs have to deal with higher noise levels and a limited deployment time (˜1 year), resulting in a small number of usable records of teleseismic earthquakes. Here we use OBSs deployed as midaperture array in the deep ocean (4.5-5.5 km water depth) of the eastern mid-Atlantic. We use evaluation criteria for OBS data and beamforming to enhance the quality of the RFs. Although some stations show reverberations caused by sedimentary cover, we are able to identify the Moho signal, indicating a normal thickness (5-8 km) of oceanic crust. Observations at single stations with thin sediments (300-400 m) indicate that a probable sharp lithosphere-asthenosphere boundary (LAB) might exist at a depth of ˜70-80 km which is in line with LAB depth estimates for similar lithospheric ages in the Pacific. The mantle discontinuities at ˜410 km and ˜660 km are clearly identifiable. Their delay times are in agreement with PREM. Overall the usage of beam-formed earthquake recordings for OBS RF analysis is an excellent way to increase the signal quality and the number of usable events.

  2. Physical, biological, current, and other data from CTD, XBT, ADCP, bottle casts, net casts, and other instruments from the N. E. Atlantic Ocean in support of the OMEX 1 project from 01 April 1993 to 01 December 1995 (NODC Accession 0000172)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Physical, biological, current, and other data were collected from CTD, XBT, ADCP, bottle casts, net casts, and other instruments from the N. E. Atlantic Ocean in...

  3. Mercury biogeochemical cycling in the ocean and policy implications.

    Science.gov (United States)

    Mason, Robert P; Choi, Anna L; Fitzgerald, William F; Hammerschmidt, Chad R; Lamborg, Carl H; Soerensen, Anne L; Sunderland, Elsie M

    2012-11-01

    Anthropogenic activities have enriched mercury in the biosphere by at least a factor of three, leading to increases in total mercury (Hg) in the surface ocean. However, the impacts on ocean fish and associated trends in human exposure as a result of such changes are less clear. Here we review our understanding of global mass budgets for both inorganic and methylated Hg species in ocean seawater. We consider external inputs from atmospheric deposition and rivers as well as internal production of monomethylmercury (CH₃Hg) and dimethylmercury ((CH₃)₂Hg). Impacts of large-scale ocean circulation and vertical transport processes on Hg distribution throughout the water column and how this influences bioaccumulation into ocean food chains are also discussed. Our analysis suggests that while atmospheric deposition is the main source of inorganic Hg to open ocean systems, most of the CH₃Hg accumulating in ocean fish is derived from in situ production within the upper waters (ocean basins are changing at different rates due to differences in atmospheric loading and that the deeper waters of the oceans are responding slowly to changes in atmospheric Hg inputs. Most biological exposures occur in the upper ocean and therefore should respond over years to decades to changes in atmospheric mercury inputs achieved by regulatory control strategies. Migratory pelagic fish such as tuna and swordfish are an important component of CH₃Hg exposure for many human populations and therefore any reduction in anthropogenic releases of Hg and associated deposition to the ocean will result in a decline in human exposure and risk. Copyright © 2012 Elsevier Inc. All rights reserved.

  4. Autonomous observing strategies for the ocean carbon cycle

    Energy Technology Data Exchange (ETDEWEB)

    Bishop, James K.; Davis, Russ E.

    2000-07-26

    Understanding the exchanges of carbon between the atmosphere and ocean and the fate of carbon delivered to the deep sea is fundamental to the evaluation of ocean carbon sequestration options. An additional key requirement is that sequestration must be verifiable and that environmental effects be monitored and minimized. These needs can be addressed by carbon system observations made from low-cost autonomous ocean-profiling floats and gliders. We have developed a prototype ocean carbon system profiler based on the Sounding Oceanographic Lagrangian Observer (SOLO; Davis et al., 1999). The SOLO/ carbon profiler will measure the two biomass components of the carbon system and their relationship to physical variables, such as upper ocean stratification and mixing. The autonomous observations within the upper 1500 m will be made on daily time scales for periods of months to seasons and will be carried out in biologically dynamic locations in the world's oceans that are difficult to access with ships (due to weather) or observe using remote sensing satellites (due to cloud cover). Such an observational capability not only will serve an important role in carbon sequestration research but will provide key observations of the global ocean's natural carbon cycle.

  5. A critical evaluation of the upper ocean heat budget in the Climate Forecast System Reanalysis data for the south central equatorial Pacific

    Energy Technology Data Exchange (ETDEWEB)

    Liu Hailong; Liu Xiangcui [State Key Laboratory of Atmospheric Sciences and Geophysical Fluid Dynamics, Institute of Atmospheric Physics, Chinese Academy of Sciences, Beijing (China); Zhang Minghua [Institute for Terrestrial and Planetary Atmospheres, Stony Brook University, State University of New York, Stony Brook, NY (United States); Lin Wuyin, E-mail: lhl@lasg.iap.ac.cn [Atmospheric Sciences Division, Brookhaven National Laboratory, Upton, NY (United States)

    2011-07-15

    Coupled ocean-atmospheric models suffer from the common bias of a spurious rain belt south of the central equatorial Pacific throughout the year. Observational constraints on key processes responsible for this bias are scarce. The recently available reanalysis from a coupled model system for the National Centers for Environmental Prediction (NCEP) Climate Forecast System Reanalysis (CFSR) data is a potential benchmark for climate models in this region. Its suitability for model evaluation and validation, however, needs to be established. This paper examines the mixed layer heat budget and the ocean surface currents-key factors for the sea surface temperature control in the double Inter-Tropical Convergence Zone in the central Pacific-from 5 deg. S to 10 deg. S and 170 deg. E to 150 deg. W. Two independent approaches are used. The first approach is through comparison of CFSR data with collocated station observations from field experiments; the second is through the residual analysis of the heat budget of the mixed layer. We show that the CFSR overestimates the net surface flux in this region by 23 W m{sup -2}. The overestimated net surface flux is mainly due to an even larger overestimation of shortwave radiation by 44 W m{sup -2}, which is compensated by a surface latent heat flux overestimated by 14 W m{sup -2}. However, the quality of surface currents and the associated oceanic heat transport in CFSR are not compromised by the surface flux biases, and they agree with the best available estimates. The uncertainties of the observational data from field experiments are also briefly discussed in the present study.

  6. Overview of the US JGOFS Bermuda Atlantic Time-series Study (BATS): a decade-scale look at ocean biology and biogeochemistry

    Science.gov (United States)

    Steinberg, Deborah K.; Carlson, Craig A.; Bates, Nicholas R.; Johnson, Rodney J.; Michaels, Anthony F.; Knap, Anthony H.

    The Bermuda Atlantic Time-series Study (BATS) commenced monthly sampling in October 1988 as part of the US Joint Global Ocean Flux Study (JGOFS) program. The goals of the US JGOFS time-series research are to better understand the basic processes that control ocean biogeochemistry on seasonal to decadal time-scales, determine the role of the oceans in the global carbon budget, and ultimately improve our ability to predict the effects of climate change on ecosystems. The BATS program samples the ocean on a biweekly to monthly basis, a strategy that resolves major seasonal patterns and interannual variability. The core cruises last 4-5 d during which hydrography, nutrients, particle flux, pigments and primary production, bacterioplankton abundance and production, and often complementary ancillary measurements are made. This overview focuses on patterns in ocean biology and biogeochemistry over a decade at the BATS site, concentrating on seasonal and interannual changes in community structure, and the physical forcing and other factors controlling the temporal dynamics. Significant seasonal and interannual variability in phytoplankton and bacterioplankton production, biomass, and community structure exists at BATS. No strong relationship exists between primary production and particle flux during the 10 yr record, with the relationship slightly improved by applying an artificial lag of 1 week between production and flux. The prokaryotic picoplankton regularly dominate the phytoplankton community; diatom blooms are rare but occur periodically in the BATS time series. The increase in Chl a concentrations during bloom periods is due to increases by most of the taxa present, rather than by any single group, and there is seasonal succession of phytoplankton. The bacterioplankton often dominate the living biomass, indicating the potential to consume large amounts of carbon and play a major ecological role within the microbial food web. Bacterial biomass, production, and

  7. Cephalopods of the Southwest Indian OceanRidge: A hotspot of biological diversity and absence of endemism

    Science.gov (United States)

    Laptikhovsky, V.; Boersch-Supan, P.; Bolstad, K.; Kemp, K.; Letessier, T.; Rogers, A. D.

    2017-02-01

    A total of 68 cephalopod species belonging to 26 families (10-11% of the total known cephalopod diversity) were collected onboard R/V Fridtjof Nansen during a research survey on Southwest Indian Ocean Ridge in November-December 2009. This relatively small area extends from the Tropical front to the Subantarctic front with four distinctive cephalopod faunas and represents one of the most outstanding hotspots of cephalopod diversity reported to date. However, most of the species caught there were characterised by circumglobal distribution in the Southern Hemisphere, and no endemic species were unambiguously found, although a number of taxa could not be confidently attributed to known species. Most of the studied area was dominated by squid species reproducing in epipelagic layers (mostly Enoploteuthidae and Pyroteuthidae). Species reproducing in meso-bathypelagial whose juveniles ascend to surface water (Cranchiidae, Histioteuthidae, etc.) became gradually more and more important southward from the Tropical Zone to the Southern Peripheral Ecotone. In the latter region they were joined by near-bottom dwellers of the order Sepiolida. The epipelagic strategy of reproduction disappears completely at the Subpolar Front, where epipelagic waters were inhabited by young members of the Cranchiidae and Gonatidae hatched in deep-seas. This study demonstrated the importance of conservation and management of this high-seas area, with its unique biodiversity and ecological resources, in line with recommendations by the IUCN Seamount project and Global Ocean Biodiversity Initiative.

  8. Interactive effects of temperature, food and skeletal mineralogy mediate biological responses to ocean acidification in a widely distributed bryozoan.

    Science.gov (United States)

    Swezey, Daniel S; Bean, Jessica R; Ninokawa, Aaron T; Hill, Tessa M; Gaylord, Brian; Sanford, Eric

    2017-04-26

    Marine invertebrates with skeletons made of high-magnesium calcite may be especially susceptible to ocean acidification (OA) due to the elevated solubility of this form of calcium carbonate. However, skeletal composition can vary plastically within some species, and it is largely unknown how concurrent changes in multiple oceanographic parameters will interact to affect skeletal mineralogy, growth and vulnerability to future OA. We explored these interactive effects by culturing genetic clones of the bryozoan Jellyella tuberculata (formerly Membranipora tuberculata ) under factorial combinations of dissolved carbon dioxide (CO 2 ), temperature and food concentrations. High CO 2 and cold temperature induced degeneration of zooids in colonies. However, colonies still maintained high growth efficiencies under these adverse conditions, indicating a compensatory trade-off whereby colonies degenerate more zooids under stress, redirecting energy to the growth and maintenance of new zooids. Low-food concentration and elevated temperatures also had interactive effects on skeletal mineralogy, resulting in skeletal calcite with higher concentrations of magnesium, which readily dissolved under high CO 2 For taxa that weakly regulate skeletal magnesium concentration, skeletal dissolution may be a more widespread phenomenon than is currently documented and is a growing concern as oceans continue to warm and acidify. © 2017 The Author(s).

  9. Mechanisms controlling primary and new production in a global ecosystem model – Part II: The role of the upper ocean short-term periodic and episodic mixing events

    Directory of Open Access Journals (Sweden)

    E. E. Popova

    2006-01-01

    Full Text Available The use of 6 h, daily, weekly and monthly atmospheric forcing resulted in dramatically different predictions of plankton productivity in a global 3-D coupled physical-biogeochemical model. Resolving the diurnal cycle of atmospheric variability by use of 6 h forcing, and hence also diurnal variability in UML depth, produced the largest difference, reducing predicted global primary and new production by 25% and 10% respectively relative to that predicted with daily and weekly forcing. This decrease varied regionally, being a 30% reduction in equatorial areas primarily because of increased light limitation resulting from deepening of the mixed layer overnight as well as enhanced storm activity, and 25% at moderate and high latitudes primarily due to increased grazing pressure resulting from late winter stratification events. Mini-blooms of phytoplankton and zooplankton occur in the model during these events, leading to zooplankton populations being sufficiently well developed to suppress the progress of phytoplankton blooms. A 10% increase in primary production was predicted in the peripheries of the oligotrophic gyres due to increased storm-induced nutrient supply end enhanced winter production during the short term stratification events that are resolved in the run forced by 6 h meteorological fields. By resolving the diurnal cycle, model performance was significantly improved with respect to several common problems: underestimated primary production in the oligotrophic gyres; overestimated primary production in the Southern Ocean; overestimated magnitude of the spring bloom in the subarctic Pacific Ocean, and overestimated primary production in equatorial areas. The result of using 6 h forcing on predicted ecosystem dynamics was profound, the effects persisting far beyond the hourly timescale, and having major consequences for predicted global and new production on an annual basis.

  10. Regional Ocean Data Assimilation

    KAUST Repository

    Edwards, Christopher A.

    2015-01-03

    This article reviews the past 15 years of developments in regional ocean data assimilation. A variety of scientific, management, and safety-related objectives motivate marine scientists to characterize many ocean environments, including coastal regions. As in weather prediction, the accurate representation of physical, chemical, and/or biological properties in the ocean is challenging. Models and observations alone provide imperfect representations of the ocean state, but together they can offer improved estimates. Variational and sequential methods are among the most widely used in regional ocean systems, and there have been exciting recent advances in ensemble and four-dimensional variational approaches. These techniques are increasingly being tested and adapted for biogeochemical applications.

  11. Integrating biogeochemistry and ecology into ocean data assimilation systems

    DEFF Research Database (Denmark)

    Brasseur, Pierre; Gruber, Nicolas; Barciela, Rosa

    2009-01-01

    that are not yet considered essential, such as upper-ocean vertical fluxes that are critically important to biological activity. Further, the observing systems will need to be expanded in terms of in situ platforms (with intensified deployments of sensors for O-2 and chlorophyll, and inclusion of new sensors...... for nutrients, zooplankton, micronekton biomass, and others), satellite missions (e.g., hyperspectral instruments for ocean color, lidar systems for mixed-layer depths, and wide-swath altimeters for coastal sea level), and improved methods to assimilate these new measurements....

  12. Warming up, turning sour, losing breath: ocean biogeochemistry under global change.

    Science.gov (United States)

    Gruber, Nicolas

    2011-05-28

    In the coming decades and centuries, the ocean's biogeochemical cycles and ecosystems will become increasingly stressed by at least three independent factors. Rising temperatures, ocean acidification and ocean deoxygenation will cause substantial changes in the physical, chemical and biological environment, which will then affect the ocean's biogeochemical cycles and ecosystems in ways that we are only beginning to fathom. Ocean warming will not only affect organisms and biogeochemical cycles directly, but will also increase upper ocean stratification. The changes in the ocean's carbonate chemistry induced by the uptake of anthropogenic carbon dioxide (CO(2)) (i.e. ocean acidification) will probably affect many organisms and processes, although in ways that are currently not well understood. Ocean deoxygenation, i.e. the loss of dissolved oxygen (O(2)) from the ocean, is bound to occur in a warming and more stratified ocean, causing stress to macro-organisms that critically depend on sufficient levels of oxygen. These three stressors-warming, acidification and deoxygenation-will tend to operate globally, although with distinct regional differences. The impacts of ocean acidification tend to be strongest in the high latitudes, whereas the low-oxygen regions of the low latitudes are most vulnerable to ocean deoxygenation. Specific regions, such as the eastern boundary upwelling systems, will be strongly affected by all three stressors, making them potential hotspots for change. Of additional concern are synergistic effects, such as ocean acidification-induced changes in the type and magnitude of the organic matter exported to the ocean's interior, which then might cause substantial changes in the oxygen concentration there. Ocean warming, acidification and deoxygenation are essentially irreversible on centennial time scales, i.e. once these changes have occurred, it will take centuries for the ocean to recover. With the emission of CO(2) being the primary driver

  13. Satellite Radiation Products for Ocean Biology and Biogeochemistry: Needs, State-of-the-Art, Gaps, Development Priorities, and Opportunities

    Directory of Open Access Journals (Sweden)

    Robert Frouin

    2018-02-01

    cosine for PAR, and sub-surface spectral scalar fluxes are presented. A procedure to estimate algorithm uncertainties in the total uncertainty budget for above-surface daily PAR, based on radiative simulations for expected situations, is described. In the future, space-borne lidars with ocean profiling capability offer the best hope for improving our knowledge of sub-surface fields. To maximize temporal coverage, space agencies should consider placing ocean-color instruments in L1 orbit, where the sunlit part of the Earth can be frequently observed.

  14. A review of biological processes within oceanic water columns relevant to the assessment of the safety of disposal of waste, notably radioactive isotopes on or within the sea bed

    International Nuclear Information System (INIS)

    Angel, M.V.

    1985-01-01

    Pelagic biological processes and their connotations in the assessment of possible dispersal mechanisms of contaminants released on the deep oceanic seabed are reviewed. Biological gradients tend to be from the surface down so the search is for processes which run counter to these general gradients. Observed profiles of standing crop of both plankton and micronekton show that below 2000 m biological activity would have to be exceptionally dynamic to have an influence that will even approach within an order of magnitude of the dispersive effect of physical mixing. Examination of all forms of known migration mechanisms fails to reveal such dynamic activity. Nor have any critical pathways been identified within the present or foreseeable pattern of exploitation of the oceans. However, a major gap in knowledge is whether the pattern of these biological processes changes substantially in the region of continental slopes. (author)

  15. Si and C interactions in the world ocean: Importance of ecological processes and implications for the role of diatoms in the biological pump

    Science.gov (United States)

    Ragueneau, Olivier; Schultes, Sabine; Bidle, Kay; Claquin, Pascal; Moriceau, BrivaëLa

    2006-12-01

    Diatoms play a major role in carbon export from surface waters, but their role in the transport of carbon to the deep sea has been questioned by global analyses of sediment trap fluxes which suggest that organic carbon fluxes and transfer efficiencies through the mesopelagic are tightly correlated with CaCO3 (Klaas and Archer, 2002; François et al., 2002). Here we explore the role of diatoms in the biological pump through a study of Si and C interactions from the molecular to the global scale. Recent findings on molecular interactions between Si and C are reviewed. The roles of bacteria, grazers and aggregation are explored and combined, to account for the extent of Si and C decoupling between surface waters and 1000 m, observed to be very homogeneous in different biogeochemical provinces of the ocean. It is suggested that the mesopelagic food web plays a crucial role in this homogeneity: Sites of high export are also sites where diatom C is being either remineralized or channeled toward the long-lived carbon pool most efficiently in the mesopelagic zone. The amount of carbon participating in the biological pump but not collected in sediment traps remains to be explored. It is also demonstrated that statistical analyses performed at global scales hide spatial variability in carrying coefficients, indicating a clear need to understand the mechanisms that control spatial and temporal variations in the relative importance of ballast minerals and other export mechanisms such as particle dynamics.

  16. Biological and associated water-quality data for lower Olmos Creek and upper San Antonio River, San Antonio, Texas, April - September 1989

    Science.gov (United States)

    Taylor, R. Lynn; Ferreira, Rodger F.

    1995-01-01

    Biological and associated water-quality data were collected from lower Olmos Creek and upper San Antonio River in San Antonio, Texas, during April-September 1989. Benthic macroinvertebrate, periphyton, and phytoplankton communities were sampled at three sites along the Olmos Creek/San Antonio River system. Total mean densities of benthic macroinvertebrates for the three sites ranged from 670 to 10,000 organisms per square meter. The most abundant macroinvertebrates were the class Insecta (insects). Total densities of periphyton ranged from 2,900 to 110,000 cells per square millimeter. Cyanophyta (blue-green algae) and Bacillariophyta (diatoms) were the predominant periphyton organisms. Total densities of phyto- plankton ranged from 5,000 to 47,000 cells per square milliliter. Blue-green algae accounted for more than one- half of the phytoplankton in each sample. Hardness ranged from 160 to 250 milligrams per liter as calcium carbonate, and alkalinity ranged from 130 to 220 milligrams per liter as calcium carbonate. The largest dissolved nitrite concentration was 0.038 milligram per liter. The largest total phosphorus concentration was 0.150 milligram per liter, over one-half of which was dissolved orthophosphate. Total aluminum and total iron were the only trace elements in water to exceed the reporting threshold by large concen- trations. Total aluminum concentrations ranged from 70 to 280 micrograms per liter, and total iron concentrations ranged from 70 to 340 micrograms per liter. Lead was the most prominent trace element in bottom-material samples, with concentrations ranging from 30 to 230 micrograms per gram.

  17. Fortuitous encounters between seagliders and adult female northern fur seals (Callorhinus ursinus) off the Washington (USA) coast: upper ocean variability and links to top predator behavior.

    Science.gov (United States)

    Pelland, Noel A; Sterling, Jeremy T; Lea, Mary-Anne; Bond, Nicholas A; Ream, Rolf R; Lee, Craig M; Eriksen, Charles C

    2014-01-01

    and temporally dynamic ocean environment, thus reflecting its influence on associated NFS prey species.

  18. Fortuitous encounters between seagliders and adult female northern fur seals (Callorhinus ursinus off the Washington (USA coast: upper ocean variability and links to top predator behavior.

    Directory of Open Access Journals (Sweden)

    Noel A Pelland

    to a spatially and temporally dynamic ocean environment, thus reflecting its influence on associated NFS prey species.

  19. Prospective comparison of molecular signatures in urothelial cancer of the bladder and the upper urinary tract--is there evidence for discordant biology?

    Science.gov (United States)

    Krabbe, Laura-Maria; Lotan, Yair; Bagrodia, Aditya; Gayed, Bishoy A; Darwish, Oussama M; Youssef, Ramy F; Bolenz, Christian; Sagalowsky, Arthur I; Raj, Ganesh V; Shariat, Shahrokh F; Kapur, Payal; Margulis, Vitaly

    2014-04-01

    Upper tract urothelial carcinoma is rare and less well studied than bladder cancer. It remains questionable if findings in bladder cancer can safely be extrapolated to upper tract urothelial carcinoma. We prospectively evaluate molecular profiles of upper tract urothelial carcinoma and bladder cancer using a cell cycle biomarker panel. Immunohistochemical staining for p21, p27, p53, cyclin E and Ki-67 was prospectively performed for 96 patients with upper tract urothelial carcinoma and 159 patients with bladder cancer with nonmetastatic high grade urothelial carcinoma treated with extirpative surgery. Data were compared between the groups according to pathological stage. Primary outcome was assessment of differences in marker expression. Secondary outcome was difference in survival according to marker status. During a median followup of 22.0 months 31.2% of patients with upper tract urothelial carcinoma and 28.3% of patients with bladder cancer had disease recurrence, and 20.8% and 27.7% died of upper tract urothelial carcinoma and bladder cancer, respectively. The number of altered markers was not significantly different between the study groups. Overall 34 patients (35.4%) with upper tract urothelial carcinoma and 62 (39.0%) with bladder cancer had an unfavorable marker score (more than 2 markers altered). There were no significant differences between upper tract urothelial carcinoma and bladder cancer in the alteration status of markers, the number of altered markers and biomarker score when substratified by pathological stage. There were no significant differences in survival outcomes between patients with upper tract urothelial carcinoma and those with bladder cancer according to the number of altered markers and biomarker score. Our results demonstrate the molecular similarity of upper tract urothelial carcinoma and bladder cancer in terms of cell cycle and proliferative tissue markers. These findings have important implications and support the further

  20. Ocean iron fertilization

    Digital Repository Service at National Institute of Oceanography (India)

    Naqvi, S.W.A.; Smetacek, V.

    In 2009 and 2010, an Indo-German scientific expedition dusted the ocean with iron to stimulate the biological pump that captures atmosphereic carbon dioxide. Two onboard scientists tell the story of this controversial project. Besides raising...

  1. Assessing the Feasibility and Risks of Using Wave-Driven Upwelling Pumps to Enhance the Biological Sequestration of Carbon in Open Oceans

    Science.gov (United States)

    White, A.; Bjorkman, K.; Grabowski, E.; Letelier, R. M.; Poulos, S.; Watkins, B.; Karl, D. M.

    2008-12-01

    In 1976, John D. Isaacs proposed to use wave energy to pump cold and nutrient-rich deep water into the sunlit surface layers. The motivation for this endeavor has taken many forms over the years, from energy production to fueling aquaculture to the more recent suggestion that artificial upwelling could be used to stimulate primary productivity and anthropogenic carbon sequestration in oligotrophic regions of the ocean. However, the potential for biological carbon sequestration in response to upwelling will depend on the concentration of nutrients relative to that of dissolved inorganic carbon in the water being upwelled and on the response of the marine microbial assemblage to this nutrient enrichment. In June 2008, we tested a commercially available wave pump in the vicinity of Station ALOHA, north of Oahu, Hawaii in order to assess the logistics of at-sea deployment and the survivability of the equipment in the open ocean. Our engineering test was also designed to evaluate a recently published hypothesis (Karl and Letelier, 2008, Marine Ecology Progress Series) that upwelling of water containing excess phosphate relative to nitrogen compared to the canonical "Redfield" molar ratio of 16N:1P, would generate a two-phased phytoplankton bloom and enhance carbon sequestration. In this presentation, we analyze the results of this field test within the context of pelagic biogeochemical cycles. Furthermore, we discuss the deployment of a 300m wave pump, efforts to sample a biochemical response, the engineering challenges faced and the practical and ethical implications of these results for future experiments aimed at stimulating the growth of phytoplankton in oligotrophic regions.

  2. Significance of detrital zircons in upper Devonian ocean-basin strata of the Sonora allochthon and Lower Permian synorogenic strata of the Mina Mexico foredeep, central Sonora, Mexico

    Science.gov (United States)

    Poole, F.G.; Gehrels, G.E.; Stewart, John H.

    2008-01-01

    U-Pb isotopic dating of detrital zircons from a conglomeratic barite sandstone in the Sonora allochthon and a calciclastic sandstone in the Mina Mexico foredeep of the Minas de Barita area reveals two main age groups in the Upper Devonian part of the Los Pozos Formation, 1.73-1.65 Ga and 1.44-1.42 Ga; and three main age groups in the Lower Permian part of the Mina Mexico Formation, 1.93-1.91 Ga, 1.45-1.42 Ga, and 1.1-1.0 Ga. Small numbers of zircons with ages of 2.72-2.65 Ga, 1.30-1.24 Ga, ca. 2.46 Ga, ca. 1.83 Ga, and ca. 0.53 Ga are also present in the Los Pozos sandstone. Detrital zircons ranging in age from 1.73 to 1.65 Ga are considered to have been derived from the Yavapai, Mojave, and Mazatzal Provinces and their transition zones of the southwestern United States and northwestern Mexico. The 1.45-1.30 Ga detrital zircons were probably derived from scattered granite bodies within the Mojave and Mazatzal basement rocks in the southwestern United States and northwestern Mexico, and possibly from the Southern and Eastern Granite-Rhyolite Provinces of the southern United States. The 1.24-1.0 Ga detrital zircons are believed to have been derived from the Grenville (Llano) Province to the east and northeast or from Grenvilleage intrusions or anatectites to the north. Several detrital zircon ages ranging from 2.72 to 1.91 Ga were probably derived originally from the Archean Wyoming Province and Early Paleoproterozoic rocks of the Lake Superior region. These older detrital zircons most likely have been recycled one or more times into the Paleozoic sandstones of central Sonora. The 0.53 Ga zircon is believed to have been derived from a Lower Cambrian granitoid or meta-morphic rock northeast of central Sonora, possibly in New Mexico and Colorado, or Oklahoma. Detrital zircon geochronology suggests that most of the detritus in both samples was derived from Laurentia to the north, whereas some detritus in the Permian synorogenic foredeep sequence was derived from the

  3. Physical and biogeochemical forcing of oxygen and nitrate changes during El Niño/El Viejo and La Niña/La Vieja upper-ocean phases in the tropical eastern South Pacific along 86° W

    Directory of Open Access Journals (Sweden)

    P. J. Llanillo

    2013-10-01

    Full Text Available Temporal changes in the water mass distribution and biogeochemical signals in the tropical eastern South Pacific are investigated with the help of an extended optimum multi-parameter (OMP analysis, a technique for inverse modeling of mixing and biogeochemical processes through a multidimensional least-square fit. Two ship occupations of a meridional section along 85°50' W from 14° S to 1° N are analysed during relatively warm (El Niño/El Viejo, March 1993 and cold (La Niña/La Vieja, February 2009 upper-ocean phases. The largest El Niño–Southern Oscillation (ENSO impact was found in the water properties and water mass distribution in the upper 200 m north of 10° S. ENSO promotes the vertical motion of the oxygen minimum zone (OMZ associated with the hypoxic equatorial subsurface water (ESSW. During a cold phase the core of the ESSW is found at shallower layers, replacing shallow (top 200 m subtropical surface water (STW. The heave of isopycnals due to ENSO partially explains the intrusion of oxygen-rich and nutrient-poor antarctic intermediate water (AAIW into the depth range of 150–500 m. The other cause of the AAIW increase at shallower depths is that this water mass flowed along shallower isopycnals in 2009. The shift in the vertical location of AAIW reaching the OMZ induces changes in the amount of oxygen advected and respired inside the OMZ: the larger the oxygen supply, the greater the respiration and the lower the nitrate loss through denitrification. Variations in the intensity of the zonal currents in the equatorial current system, which ventilates the OMZ from the west, are used to explain the patchy latitudinal changes of seawater properties observed along the repeated section. Significant changes reach down to 800 m, suggesting that decadal variability (Pacific decadal oscillation is also a potential driver in the observed variability.

  4. From the track to the ocean: Using flow control to improve marine bio-logging tags for cetaceans.

    Directory of Open Access Journals (Sweden)

    Giovani Fiore

    Full Text Available Bio-logging tags are an important tool for the study of cetaceans, but superficial tags inevitably increase hydrodynamic loading. Substantial forces can be generated by tags on fast-swimming animals, potentially affecting behavior and energetics or promoting early tag removal. Streamlined forms have been used to reduce loading, but these designs can accelerate flow over the top of the tag. This non-axisymmetric flow results in large lift forces (normal to the animal that become the dominant force component at high speeds. In order to reduce lift and minimize total hydrodynamic loading this work presents a new tag design (Model A that incorporates a hydrodynamic body, a channel to reduce fluid speed differences above and below the housing and wing to redirect flow to counter lift. Additionally, three derivatives of the Model A design were used to examine the contribution of individual flow control features to overall performance. Hydrodynamic loadings of four models were compared using computational fluid dynamics (CFD. The Model A design eliminated all lift force and generated up to ~30 N of downward force in simulated 6 m/s aligned flow. The simulations were validated using particle image velocimetry (PIV to experimentally characterize the flow around the tag design. The results of these experiments confirm the trends predicted by the simulations and demonstrate the potential benefit of flow control elements for the reduction of tag induced forces on the animal.

  5. Biological, chemical, and physical data from CTD/XCTD from five Japanese R/Vs in the North Pacific Ocean from January to December 2002 (NODC Accession 0001334)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Temperature profile, nutrients, and other data were collected using XCTD and CTD casts from KOFU MARU and other platforms in the North Pacific Ocean from 01 January...

  6. Ocean Fertilization for Sequestration of Carbon Dioxide from the Atmosphere

    Science.gov (United States)

    Boyd, Philip W.

    The ocean is a major sink for both preindustrial and anthropogenic carbon dioxide. Both physically and biogeochemically driven pumps, termed the solubility and biological pump, respectively Fig.5.1) are responsible for the majority of carbon sequestration in the ocean's interior [1]. The solubility pump relies on ocean circulation - specifically the impact of cooling of the upper ocean at high latitudes both enhances the solubility of carbon dioxide and the density of the waters which sink to great depth (the so-called deepwater formation) and thereby sequester carbon in the form of dissolved inorganic carbon (Fig.5.1). The biological pump is driven by the availability of preformed plant macronutrients such as nitrate or phosphate which are taken up by phytoplankton during photosynthetic carbon fixation. A small but significant proportion of this fixed carbon sinks into the ocean's interior in the form of settling particles, and in order to maintain equilibrium carbon dioxide from the atmosphere is transferred across the air-sea interface into the ocean (the so-called carbon drawdown) thereby decreasing atmospheric carbon dioxide (Fig.5.1).Fig.5.1

  7. Global ocean monitoring for the World Climate Research Programme.

    Science.gov (United States)

    Revelle, R; Bretherton, F

    1986-07-01

    Oceanic research and modelling for the World Climate Research Program will utilize several recently-developed instruments and measuring techniques as well as well-tested, long-used instruments. Ocean-scanning satellites will map the component of the ocean-surface topography related to ocean currents and mesoscale eddies and to fluctuating water volumes caused by ocean warming and cooling. Other satellite instruments will measure the direction and magnitude of wind stress on the sea surface, surface water temperatures, the distribution of chlorophyll and other photosynthetic pigments, the characteristics of internal waves, and possible precipitation over the ocean. Networks of acoustic transponders will obtain a three-dimensional picture of the distribution of temperature from the surface down to mid-depth and of long-term changes in temperature at depth. Ocean research vessels will determine the distribution and fate of geochemical tracers and will also make high-precision, deep hydrographic casts. Ships of opportunity, using expendable instruments, will measure temperature, salinity and currents in the upper water layers. Drifting and anchored buoys will also measure these properties as well as those of the air above the sea surface. Tide gauges installed on islands and exposed coastal locations will measure variations in monthly and shorter-period mean sea level. These tide gauges will provide 'ground truth' for the satellite maps of sea-surface topography, and will also determine variations in ocean currents and temperature.All these instruments will be used in several major programs, the most ambitious of which is the World Ocean Circulation Experiment (WOCE) designed to obtain global measurements of major currents throughout the world ocean, greater understanding of the transformation of water masses, and the role of advective, convective, and turbulent processes in exchange of properties between surface and deep-ocean layers.A five- to ten-year experiment

  8. 57Fe Mössbauer analysis of the Upper Triassic-Lower Jurassic deep-sea chert: Paleo-redox history across the Triassic-Jurassic boundary and the Toarcian oceanic anoxic event

    International Nuclear Information System (INIS)

    Sato, Tomohiko; Isozaki, Yukio; Shozugawa, Katsumi; Seimiya, Kimiko; Matsuo, Motoyuki

    2012-01-01

    We investigated the paleo-redox change across the Triassic-Jurassic (T-J) boundary (∼200 Ma) and the Early Toarcian oceanic anoxic event (T-OAE; ∼183 Ma) recorded in the Upper Triassic to Lower Jurassic pelagic deep-sea cherts in the Inuyama area, Central Japan. The present 57 Fe Mössbauer spectroscopic analysis for these cherts identified five iron species, i.e., hematite (α-Fe 2 O 3 ), pyrite (FeS 2 ), paramagnetic Fe 3 +  , and two paramagnetic Fe 2 +  with different quadrupole splittings. The occurrence of hematite and pyrite in deep-sea cherts essentially indicates primary oxidizing and reducing depositional conditions, respectively. The results confirmed that oxidizing conditions persisted in deep-sea across the T-J boundary. In contrast, across the T-OAE, deep-sea environment shifted to reducing conditions. The first appearance of the gray pyrite-bearing chert marked the onset of the deep-sea oxygen-depletion in the middle Pliensbachian, i.e., clearly before the shallow-sea T-OAE.

  9. Ka-band Doppler Scatterometer for Measurements of Ocean Vector Winds and Surface Currents

    Data.gov (United States)

    National Aeronautics and Space Administration — Ocean surface currents impact heat transport, surface momentum and gas fluxes, ocean productivity and marine biological communities. Ocean currents also have social...

  10. Enhanced Biological Sampling Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is a database of a variety of biological, reproductive, and energetic data collected from fish on the continental shelf in the northwest Atlantic Ocean. Species...

  11. Marine biology

    International Nuclear Information System (INIS)

    Thurman, H.V.; Webber, H.H.

    1984-01-01

    This book discusses both taxonomic and ecological topics on marine biology. Full coverage of marine organisms of all five kingdoms is provided, along with interesting and thorough discussion of all major marine habitats. Organization into six major parts allows flexibility. It also provides insight into important topics such as disposal of nuclear waste at sea, the idea that life began on the ocean floor, and how whales, krill, and people interact. A full-color photo chapter reviews questions, and exercises. The contents are: an overview marine biology: fundamental concepts/investigating life in the ocean; the physical ocean, the ocean floor, the nature of water, the nature and motion of ocean water; general ecology, conditions for life in the sea, biological productivity and energy transfer; marine organisms; monera, protista, mycota and metaphyta; the smaller marine animals, the large animals marine habitats, the intertidal zone/benthos of the continental shelf, the photic zone, the deep ocean, the ocean under stress, marine pollution, appendix a: the metric system and conversion factors/ appendix b: prefixes and suffixes/ appendix c: taxonomic classification of common marine organisms, and glossary, and index

  12. Upper ocean stratification and sea ice growth rates during the summer-fall transition, as revealed by Elephant seal foraging in the Adélie Depression, East Antarctica

    Directory of Open Access Journals (Sweden)

    G. D. Williams

    2011-03-01

    Full Text Available Southern elephant seals (Mirounga leonina, fitted with Conductivity-Temperature-Depth sensors at Macquarie Island in January 2005 and 2010, collected unique oceanographic observations of the Adélie and George V Land continental shelf (140–148° E during the summer-fall transition (late February through April. This is a key region of dense shelf water formation from enhanced sea ice growth/brine rejection in the local coastal polynyas. In 2005, two seals occupied the continental shelf break near the grounded icebergs at the northern end of the Mertz Glacier Tongue for several weeks from the end of February. One of the seals migrated west to the Dibble Ice Tongue, apparently utilising the Antarctic Slope Front current near the continental shelf break. In 2010, immediately after that year's calving of the Mertz Glacier Tongue, two seals migrated to the same region but penetrated much further southwest across the Adélie Depression and sampled the Commonwealth Bay polynya from March through April. Here we present observations of the regional oceanography during the summer-fall transition, in particular (i the zonal distribution of modified Circumpolar Deep Water exchange across the shelf break, (ii the upper ocean stratification across the Adélie Depression, including alongside iceberg C-28 that calved from the Mertz Glacier and (iii the convective overturning of the deep remnant seasonal mixed layer in Commonwealth Bay from sea ice growth. Heat and freshwater budgets to 200–300 m are used to estimate the ocean heat content (400→50 MJ m−2, flux (50–200 W m−2 loss and sea ice growth rates (maximum of 7.5–12.5 cm day−1. Mean seal-derived sea ice growth rates were within the range of satellite-derived estimates from 1992–2007 using ERA-Interim data. We speculate that the continuous foraging by the seals within Commonwealth Bay during the summer/fall transition was due to favorable feeding

  13. Upper ocean stratification and sea ice growth rates during the summer-fall transition, as revealed by Elephant seal foraging in the Adélie Depression, East Antarctica

    Science.gov (United States)

    Williams, G. D.; Hindell, M.; Houssais, M.-N.; Tamura, T.; Field, I. C.

    2011-03-01

    Southern elephant seals (Mirounga leonina), fitted with Conductivity-Temperature-Depth sensors at Macquarie Island in January 2005 and 2010, collected unique oceanographic observations of the Adélie and George V Land continental shelf (140-148° E) during the summer-fall transition (late February through April). This is a key region of dense shelf water formation from enhanced sea ice growth/brine rejection in the local coastal polynyas. In 2005, two seals occupied the continental shelf break near the grounded icebergs at the northern end of the Mertz Glacier Tongue for several weeks from the end of February. One of the seals migrated west to the Dibble Ice Tongue, apparently utilising the Antarctic Slope Front current near the continental shelf break. In 2010, immediately after that year's calving of the Mertz Glacier Tongue, two seals migrated to the same region but penetrated much further southwest across the Adélie Depression and sampled the Commonwealth Bay polynya from March through April. Here we present observations of the regional oceanography during the summer-fall transition, in particular (i) the zonal distribution of modified Circumpolar Deep Water exchange across the shelf break, (ii) the upper ocean stratification across the Adélie Depression, including alongside iceberg C-28 that calved from the Mertz Glacier and (iii) the convective overturning of the deep remnant seasonal mixed layer in Commonwealth Bay from sea ice growth. Heat and freshwater budgets to 200-300 m are used to estimate the ocean heat content (400→50 MJ m-2), flux (50-200 W m-2 loss) and sea ice growth rates (maximum of 7.5-12.5 cm day-1). Mean seal-derived sea ice growth rates were within the range of satellite-derived estimates from 1992-2007 using ERA-Interim data. We speculate that the continuous foraging by the seals within Commonwealth Bay during the summer/fall transition was due to favorable feeding conditions resulting from the convective overturning of the deep

  14. Global oceanic production of nitrous oxide

    Science.gov (United States)

    Freing, Alina; Wallace, Douglas W. R.; Bange, Hermann W.

    2012-01-01

    We use transient time distributions calculated from tracer data together with in situ measurements of nitrous oxide (N2O) to estimate the concentration of biologically produced N2O and N2O production rates in the ocean on a global scale. Our approach to estimate the N2O production rates integrates the effects of potentially varying production and decomposition mechanisms along the transport path of a water mass. We estimate that the oceanic N2O production is dominated by nitrification with a contribution of only approximately 7 per cent by denitrification. This indicates that previously used approaches have overestimated the contribution by denitrification. Shelf areas may account for only a negligible fraction of the global production; however, estuarine sources and coastal upwelling of N2O are not taken into account in our study. The largest amount of subsurface N2O is produced in the upper 500 m of the water column. The estimated global annual subsurface N2O production ranges from 3.1 ± 0.9 to 3.4 ± 0.9 Tg N yr−1. This is in agreement with estimates of the global N2O emissions to the atmosphere and indicates that a N2O source in the mixed layer is unlikely. The potential future development of the oceanic N2O source in view of the ongoing changes of the ocean environment (deoxygenation, warming, eutrophication and acidification) is discussed. PMID:22451110

  15. Global oceanic production of nitrous oxide.

    Science.gov (United States)

    Freing, Alina; Wallace, Douglas W R; Bange, Hermann W

    2012-05-05

    We use transient time distributions calculated from tracer data together with in situ measurements of nitrous oxide (N(2)O) to estimate the concentration of biologically produced N(2)O and N(2)O production rates in the ocean on a global scale. Our approach to estimate the N(2)O production rates integrates the effects of potentially varying production and decomposition mechanisms along the transport path of a water mass. We estimate that the oceanic N(2)O production is dominated by nitrification with a contribution of only approximately 7 per cent by denitrification. This indicates that previously used approaches have overestimated the contribution by denitrification. Shelf areas may account for only a negligible fraction of the global production; however, estuarine sources and coastal upwelling of N(2)O are not taken into account in our study. The largest amount of subsurface N(2)O is produced in the upper 500 m of the water column. The estimated global annual subsurface N(2)O production ranges from 3.1 ± 0.9 to 3.4 ± 0.9 Tg N yr(-1). This is in agreement with estimates of the global N(2)O emissions to the atmosphere and indicates that a N(2)O source in the mixed layer is unlikely. The potential future development of the oceanic N(2)O source in view of the ongoing changes of the ocean environment (deoxygenation, warming, eutrophication and acidification) is discussed.

  16. Global Ocean Phytoplankton

    Science.gov (United States)

    Franz, B. A.; Behrenfeld, M. J.; Siegel, D. A.; Werdell, P. J.

    2014-01-01

    Marine phytoplankton are responsible for roughly half the net primary production (NPP) on Earth, fixing atmospheric CO2 into food that fuels global ocean ecosystems and drives the ocean's biogeochemical cycles. Phytoplankton growth is highly sensitive to variations in ocean physical properties, such as upper ocean stratification and light availability within this mixed layer. Satellite ocean color sensors, such as the Sea-viewing Wide Field-of-view Sensor (SeaWiFS; McClain 2009) and Moderate Resolution Imaging Spectroradiometer (MODIS; Esaias 1998), provide observations of sufficient frequency and geographic coverage to globally monitor physically-driven changes in phytoplankton distributions. In practice, ocean color sensors retrieve the spectral distribution of visible solar radiation reflected upward from beneath the ocean surface, which can then be related to changes in the photosynthetic phytoplankton pigment, chlorophyll- a (Chla; measured in mg m-3). Here, global Chla data for 2013 are evaluated within the context of the 16-year continuous record provided through the combined observations of SeaWiFS (1997-2010) and MODIS on Aqua (MODISA; 2002-present). Ocean color measurements from the recently launched Visible and Infrared Imaging Radiometer Suite (VIIRS; 2011-present) are also considered, but results suggest that the temporal calibration of the VIIRS sensor is not yet sufficiently stable for quantitative global change studies. All MODISA (version 2013.1), SeaWiFS (version 2010.0), and VIIRS (version 2013.1) data presented here were produced by NASA using consistent Chla algorithms.

  17. Physical, chemical, geological, and biological data collected by U.S. Geological Survey from moorings in the North Atlantic Ocean, North Pacific Ocean, and Mediterranean Sea from 1975-05-08 to 2015-07-14 (NCEI Accession 0156446)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Time series datasets collected by the USGS Coastal and Marine Geology Program from 1975 to the present. The data were collected to address specific research...

  18. Anomalous intraseasonal events in the thermocline ridge region of Southern Tropical Indian Ocean and their regional impacts

    Science.gov (United States)

    Jayakumar, A.; Gnanaseelan, C.

    2012-03-01

    The present study explores the mechanisms responsible for the strong intraseasonal cooling events in the Thermocline Ridge region of the southwestern Indian Ocean. Air sea interface and oceanic processes associated with Madden Julian Oscillation are studied using an Ocean General Circulation Model and satellite observations. Sensitivity experiments are designed to understand the ocean response to intraseasonal forcing with a special emphasis on 2002 cooling events, which recorded the strongest intraseasonal perturbations during the last well-observed decade. This event is characterized by anomalous Walker circulation over the tropical Indian Ocean and persistent intraseasonal heat flux anomaly for a longer duration than is typical for similar events (but without any favorable preconditioning of ocean basic state at the interannual timescale). The model heat budget analysis during 1996 to 2007 revealed an in-phase relationship between atmospheric fluxes associated with Madden Julian Oscillation and the subsurface oceanic processes during the intense cooling events of 2002. The strong convection, reduced shortwave radiation and increased evaporation have contributed to the upper ocean heat loss in addition to the slower propagation of active phase of convection, which supported the integration of longer duration of forcing. The sensitivity experiments revealed that dynamic response of ocean through entrainment at the intraseasonal timescale primarily controls the biological response during the event, with oceanic interannual variability playing a secondary role. This study further speculates the role of oceanic intraseasonal variability in the 2002 droughts over Indian subcontinent.

  19. Delaware River and Upper Bay Sediment Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The area of coverage consists of 192 square miles of benthic habitat mapped from 2005 to 2007 in the Delaware River and Upper Delaware Bay. The bottom sediment map...

  20. Environmental Regulation of Plant Gene Expression: An Rt-qPCR Laboratory Project for an Upper-Level Undergraduate Biochemistry or Molecular Biology Course

    Science.gov (United States)

    Eickelberg, Garrett J.; Fisher, Alison J.

    2013-01-01

    We present a novel laboratory project employing "real-time" RT-qPCR to measure the effect of environment on the expression of the "FLOWERING LOCUS C" gene, a key regulator of floral timing in "Arabidopsis thaliana" plants. The project requires four 3-hr laboratory sessions and is aimed at upper-level undergraduate…

  1. Optimal Conventional and Semi-Natural Treatments for the Upper Yakima Spring Chinook Salmon Supplementation Project, Treatment Definitions and Descriptions, and Biological Specifications for Facility Design, Final Report 1999

    International Nuclear Information System (INIS)

    Hager, Robert C.; Costello, Ronald J.

    1999-01-01

    This report describes the Yakima Fisheries Project facilities (Cle Elum Hatchery and acclimation satellites) which provide the mechanism to conduct state-of-the-art research for addressing questions about spring chinook supplementation strategies. The definition, descriptions, and specifications for the Yakima spring chinook supplementation program permit evaluation of alternative fish culture techniques that should yield improved methods and procedures to produce wild-like fish with higher survival that can be used to rebuild depleted spring chinook stocks of the Columbia River Basin. The definition and description of three experimental treatments, Optimal Conventional (OCT), Semi-Natural (SNT), Limited Semi-Natural (LSNT), and the biological specifications for facilities have been completed for the upper Yakima spring chinook salmon stock of the Yakima Fisheries Project. The task was performed by the Biological Specifications Work Group (BSWG) represented by Yakama Indian Nation, Washington Department of Fish and Wildlife, National Marine Fisheries Service, and Bonneville Power Administration. The control and experimental variables of the experimental treatments (OCT, SNT, and LSNT) are described in sufficient detail to assure that the fish culture facilities will be designed and operated as a production scale laboratory to produce and test supplemented upper Yakima spring chinook salmon. Product specifications of the treatment groups are proposed to serve as the generic templates for developing greater specificity for measurements of product attributes. These product specifications will be used to monitor and evaluate treatment effects, with respect to the biological response variables (post release survival, long-term fitness, reproductive success and ecological interactions)

  2. Optimal Conventional and Semi-Natural Treatments for the Upper Yakima Spring Chinook Salmon Supplementation Project; Treatment Definitions and Descriptions and Biological Specifications for Facility Design, 1995-1999 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Hager, Robert C. (Hatchery Operations Consulting); Costello, Ronald J. (Mobrand Biometrics, Inc., Vashon Island, WA)

    1999-10-01

    This report describes the Yakima Fisheries Project facilities (Cle Elum Hatchery and acclimation satellites) which provide the mechanism to conduct state-of-the-art research for addressing questions about spring chinook supplementation strategies. The definition, descriptions, and specifications for the Yakima spring chinook supplementation program permit evaluation of alternative fish culture techniques that should yield improved methods and procedures to produce wild-like fish with higher survival that can be used to rebuild depleted spring chinook stocks of the Columbia River Basin. The definition and description of three experimental treatments, Optimal Conventional (OCT), Semi-Natural (SNT), Limited Semi-Natural (LSNT), and the biological specifications for facilities have been completed for the upper Yakima spring chinook salmon stock of the Yakima Fisheries Project. The task was performed by the Biological Specifications Work Group (BSWG) represented by Yakama Indian Nation, Washington Department of Fish and Wildlife, National Marine Fisheries Service, and Bonneville Power Administration. The control and experimental variables of the experimental treatments (OCT, SNT, and LSNT) are described in sufficient detail to assure that the fish culture facilities will be designed and operated as a production scale laboratory to produce and test supplemented upper Yakima spring chinook salmon. Product specifications of the treatment groups are proposed to serve as the generic templates for developing greater specificity for measurements of product attributes. These product specifications will be used to monitor and evaluate treatment effects, with respect to the biological response variables (post release survival, long-term fitness, reproductive success and ecological interactions).

  3. Pathways of upwelling deep waters to the surface of the Southern Ocean

    Science.gov (United States)

    Tamsitt, Veronica; Drake, Henri; Morrison, Adele; Talley, Lynne; Dufour, Carolina; Gray, Alison; Griffies, Stephen; Mazloff, Matthew; Sarmiento, Jorge; Wang, Jinbo; Weijer, Wilbert

    2017-04-01

    Upwelling of Atlantic, Indian and Pacific deep waters to the sea surface in the Southern Ocean closes the global overturning circulation and is fundamentally important for oceanic uptake of anthropogenic carbon and heat, nutrient resupply for sustaining oceanic biological production, and the melt rate of ice shelves. Here we go beyond the two-dimensional view of Southern Ocean upwelling, to show detailed Southern Ocean upwelling pathways in three dimensions, using hydrographic observations and particle tracking in high-resolution ocean and climate models. The northern deep waters enter the Antarctic Circumpolar Current (ACC) via narrow southward currents along the boundaries of the three ocean basins, before spiraling southeastward and upward through the ACC. Upwelling is greatly enhanced at five major topographic features, associated with vigorous mesoscale eddy activity. Deep water reaches the upper ocean predominantly south of the southern ACC boundary, with a spatially nonuniform distribution, regionalizing warm water supply to Antarctic ice shelves and the delivery of nutrient and carbon-rich water to the sea surface. The timescale for half of the deep water to upwell from 30°S to the mixed layer is on the order of 60-90 years, which has important implications for the timescale for signals to propagate through the deep ocean. In addition, we quantify the diabatic transformation along particle trajectories, to identify where diabatic processes are important along the upwelling pathways.

  4. Examples and applications in long-range ocean acoustics

    International Nuclear Information System (INIS)

    Vera, M D

    2007-01-01

    Acoustic energy propagates effectively to long ranges in the ocean interior because of the physical properties of the marine environment. Sound propagation in the ocean is relevant to a variety of studies in communication, climatology and marine biology. Examples drawn from ocean acoustics, therefore, are compelling to students with a variety of interests. The dependence of sound speed on depth results in a waveguide that permits the detection of acoustic energy at ranges, in some experiments, of thousands of kilometres. This effect serves as an illustration of Snell's law with a continuously variable index of refraction. Acoustic tomography also offers a means for imaging the ocean's thermal structure, because of the dependence of sound speed on temperature. The ability to perform acoustic thermometry for large transects of the ocean provides an effective means of studying climate change. This application in an area of substantial popular attention allows for an effective introduction to concepts in ray propagation. Aspects of computational ocean acoustics can be productive classroom examples in courses ranging from introductory physics to upper-division mathematical methods courses

  5. The role of nutricline depth in regulating the ocean carbon cycle.

    Science.gov (United States)

    Cermeño, Pedro; Dutkiewicz, Stephanie; Harris, Roger P; Follows, Mick; Schofield, Oscar; Falkowski, Paul G

    2008-12-23

    Carbon uptake by marine phytoplankton, and its export as organic matter to the ocean interior (i.e., the "biological pump"), lowers the partial pressure of carbon dioxide (pCO(2)) in the upper ocean and facilitates the diffusive drawdown of atmospheric CO(2). Conversely, precipitation of calcium carbonate by marine planktonic calcifiers such as coccolithophorids increases pCO(2) and promotes its outgassing (i.e., the "alkalinity pump"). Over the past approximately 100 million years, these two carbon fluxes have been modulated by the relative abundance of diatoms and coccolithophores, resulting in biological feedback on atmospheric CO(2) and Earth's climate; yet, the processes determining the relative distribution of these two phytoplankton taxa remain poorly understood. We analyzed phytoplankton community composition in the Atlantic Ocean and show that the distribution of diatoms and coccolithophorids is correlated with the nutricline depth, a proxy of nutrient supply to the upper mixed layer of the ocean. Using this analysis in conjunction with a coupled atmosphere-ocean intermediate complexity model, we predict a dramatic reduction in the nutrient supply to the euphotic layer in the coming century as a result of increased thermal stratification. Our findings indicate that, by altering phytoplankton community composition, this causal relationship may lead to a decreased efficiency of the biological pump in sequestering atmospheric CO(2), implying a positive feedback in the climate system. These results provide a mechanistic basis for understanding the connection between upper ocean dynamics, the calcium carbonate-to-organic C production ratio and atmospheric pCO(2) variations on time scales ranging from seasonal cycles to geological transitions.

  6. CROOS - Collaborative Research on Oregon Ocean Salmon

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Goal 1: Improve understanding of salmon ocean ecology by integrating stock-specific distribution patterns over space and time with biological and environmental data....

  7. Effects of wastewater effluent discharge and treatment facility upgrades on environmental and biological conditions of the upper Blue River, Johnson County, Kansas and Jackson County, Missouri, January 2003 through March 2009

    Science.gov (United States)

    Graham, Jennifer L.; Stone, Mandy L.; Rasmussen, Teresa J.; Poulton, Barry C.

    2010-01-01

    The Johnson County Blue River Main Wastewater Treatment Facility discharges into the upper Blue River near the border between Johnson County, Kansas and Jackson County, Missouri. During 2005 through 2007 the wastewater treatment facility underwent upgrades to increase capacity and include biological nutrient removal. The effects of wastewater effluent on environmental and biological conditions of the upper Blue River were assessed by comparing an upstream site to two sites located downstream from the wastewater treatment facility. Environmental conditions were evaluated using previously and newly collected discrete and continuous data, and were compared with an assessment of biological community composition and ecosystem function along the upstream-downstream gradient. This evaluation is useful for understanding the potential effects of wastewater effluent on water quality, biological community structure, and ecosystem function. In addition, this information can be used to help achieve National Pollution Discharge Elimination System (NPDES) wastewater effluent permit requirements after additional studies are conducted. The effects of wastewater effluent on the water-quality conditions of the upper Blue River were most evident during below-normal and normal streamflows (about 75 percent of the time), when wastewater effluent contributed more than 20 percent to total streamflow. The largest difference in water-quality conditions between the upstream and downstream sites was in nutrient concentrations. Total and inorganic nutrient concentrations at the downstream sites during below-normal and normal streamflows were 4 to 15 times larger than at the upstream site, even after upgrades to the wastewater treatment facility were completed. However, total nitrogen concentrations decreased in wastewater effluent and at the downstream site following wastewater treatment facility upgrades. Similar decreases in total phosphorus were not observed, likely because the biological

  8. Warm ocean processes and carbon cycling in the Eocene.

    Science.gov (United States)

    John, Eleanor H; Pearson, Paul N; Coxall, Helen K; Birch, Heather; Wade, Bridget S; Foster, Gavin L

    2013-10-28

    Sea surface and subsurface temperatures over large parts of the ocean during the Eocene epoch (55.5-33.7 Ma) exceeded modern values by several degrees, which must have affected a number of oceanic processes. Here, we focus on the effect of elevated water column temperatures on the efficiency of the biological pump, particularly in relation to carbon and nutrient cycling. We use stable isotope values from exceptionally well-preserved planktonic foraminiferal calcite from Tanzania and Mexico to reconstruct vertical carbon isotope gradients in the upper water column, exploiting the fact that individual species lived and calcified at different depths. The oxygen isotope ratios of different species' tests are used to estimate the temperature of calcification, which we converted to absolute depths using Eocene temperature profiles generated by general circulation models. This approach, along with potential pitfalls, is illustrated using data from modern core-top assemblages from the same area. Our results indicate that, during the Early and Middle Eocene, carbon isotope gradients were steeper (and larger) through the upper thermocline than in the modern ocean. This is consistent with a shallower average depth of organic matter remineralization and supports previously proposed hypotheses that invoke high metabolic rates in a warm Eocene ocean, leading to more efficient recycling of organic matter and reduced burial rates of organic carbon.

  9. Biological and other data collected from bottle casts in the NW Atlantic Ocean from HERMANO GINES from 16 January 2002 to 18 May 2004 (NODC Accession 0002316)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Data collected in support of the CARIACO program, which is studying the relationship between surface primary production, physical forcing variables like the wind,...

  10. Ocean Acidification | Smithsonian Ocean Portal

    Science.gov (United States)

    Natural History Blog For Educators At The Museum Media Archive Ocean Life & Ecosystems Mammals Sharks Mangroves Poles Census of Marine Life Planet Ocean Tides & Currents Waves & Storms The Seafloor ocean is affected. Such a relatively quick change in ocean chemistry doesn't give marine life, which

  11. Physical, chemical, and biological profile data collected aboard the HERMANO GINES as part of the CArbon Retention In A Colored Ocean (CARIACO) program in the Cariaco Basin of the Caribbean Sea off the coast of Venezuela, June 14, 2005 - February 7, 2006 (NODC Accession 0002797)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Physical, chemical, and biological profile data collected using bottle and CTD casts aboard the vessel HERMANO GINES by the Fundacion La Salle (Venezuela) in support...

  12. Time scales of change in chemical and biological parameters after engineered levee breaches adjacent to Upper Klamath and Agency Lakes, Oregon

    Science.gov (United States)

    Kuwabara, James S.; Topping, Brent R.; Carter, James L.; Wood, Tamara M.; Parcheso, Francis; Cameron, Jason M.; Asbill, Jessica R.; Carlson, Rick A.; Fend, Steven V.

    2012-01-01

    Eight sampling trips were coordinated after engineered levee breaches hydrologically reconnected both Upper Klamath Lake and Agency Lake, Oregon, to adjacent wetlands. The reconnection, by a series of explosive blasts, was coordinated by The Nature Conservancy to reclaim wetlands that had for approximately seven decades been leveed for crop production. Sets of nonmetallic porewater profilers (U.S. Patent 8,051,727 B1; November 8, 2011; http://www.uspto.gov/web/patents/patog/ week45/OG/html/1372-2/US08051727-20111108.html.) were deployed during these trips in November 2007, June 2008, May 2009, July 2009, May 2010, August 2010, June 2011, and July 2011 (table 1). Deployments temporally spanned the annual cyanophyte bloom of Aphanizomenon flos-aquae and spatially involved three lake and four wetland sites. Spatial and temporal variation in solute benthic flux was determined by the field team, using the profilers, over an approximately 4-year period beginning 3 days after the levee breaches. The highest flux to the water column of dissolved organic carbon (DOC) was detected in the newly flooded wetland, contrasting negative or insignificant DOC fluxes at adjacent lake sites. Over the multiyear study, DOC benthic fluxes dissipated in the reconnected wetlands, converging to values similar to those for established wetlands and to the adjacent lake (table 2). In contrast to DOC, benthic sources of soluble reactive phosphorus, ammonium, dissolved iron and manganese from within the reconnected wetlands were consistently elevated (that is, significant in magnitude relative to riverine and established-wetland sources) indicating a multi-year time scale for certain chemical changes after the levee breaches (table 2). Colonization of the reconnected wetlands by aquatic benthic invertebrates during the study trended toward the assemblages in established wetlands, providing further evidence of a multiyear transition of this area to permanent aquatic habitat (table 3). Both the

  13. The upper to uppermost Cenomanian oceanic anoxic event: a review and an interpretation involving a seawater stratification by the CO{sub 2} of mantle origin; L`evenement oceanique anoxique du Cenomanien superieur-terminal: une revue et une interpretation mettant en jeu une stratification des eaux marines par le CO{sub 2} mantellique

    Energy Technology Data Exchange (ETDEWEB)

    Busson, G; Cornee, A [Laboratoire de Geologie du Museum, 75 - Paris (France)

    1997-12-31

    Oil exploration data have revealed the exceptional richness of the middle Cretaceous in source rocks worldwide. Oceanic drillings have shown the existence of oceanic anoxic events (OAE) well defined in time. This study analyzes the OAE 2 event dated from the upper Cenomanian-lower Turonian. This event has been recognized in numerous sites from the northern, central and southern Atlantic and punctually in the Pacific and Indian oceans. It occurs in both numerous deep oceanic sites and orogenic zones, and stable platforms covered by epeiric seas. It coincides with a sea level rise which is one of the most sudden and highest in Phanerozoic times and it stands out as a remarkable episode of massive faunal extinction which led to the deposition of organic matter of marine planktonic dominant nature. The first part of the study recalls the previous interpretations of this event (oceanic stratification, euxinic conditions, spreading of an oxygen minimum zone, greenhouse climate effect, sluggish atmospheric and oceanic circulations, high planktonic production, great oceanic overturns, marginal or general upwellings, marine transgressions on epeiric areas etc..). The second part gives the basis of the new hypothesis: connection between separated seas due to the transgression, retreat of evaporite facies, high sea-floor spreading rates, intense volcanic activity and high mantle outgassing with huge CO{sub 2} influxes. The last part describes the proposed interpretation: CO{sub 2} accumulation in deep and intermediate waters and sea overflows on marginal and continental areas which led to a rise of the CO{sub 2}-rich hypolimnion. (J.S.) 236 refs.

  14. The upper to uppermost Cenomanian oceanic anoxic event: a review and an interpretation involving a seawater stratification by the CO{sub 2} of mantle origin; L`evenement oceanique anoxique du Cenomanien superieur-terminal: une revue et une interpretation mettant en jeu une stratification des eaux marines par le CO{sub 2} mantellique

    Energy Technology Data Exchange (ETDEWEB)

    Busson, G.; Cornee, A. [Laboratoire de Geologie du Museum, 75 - Paris (France)

    1996-12-31

    Oil exploration data have revealed the exceptional richness of the middle Cretaceous in source rocks worldwide. Oceanic drillings have shown the existence of oceanic anoxic events (OAE) well defined in time. This study analyzes the OAE 2 event dated from the upper Cenomanian-lower Turonian. This event has been recognized in numerous sites from the northern, central and southern Atlantic and punctually in the Pacific and Indian oceans. It occurs in both numerous deep oceanic sites and orogenic zones, and stable platforms covered by epeiric seas. It coincides with a sea level rise which is one of the most sudden and highest in Phanerozoic times and it stands out as a remarkable episode of massive faunal extinction which led to the deposition of organic matter of marine planktonic dominant nature. The first part of the study recalls the previous interpretations of this event (oceanic stratification, euxinic conditions, spreading of an oxygen minimum zone, greenhouse climate effect, sluggish atmospheric and oceanic circulations, high planktonic production, great oceanic overturns, marginal or general upwellings, marine transgressions on epeiric areas etc..). The second part gives the basis of the new hypothesis: connection between separated seas due to the transgression, retreat of evaporite facies, high sea-floor spreading rates, intense volcanic activity and high mantle outgassing with huge CO{sub 2} influxes. The last part describes the proposed interpretation: CO{sub 2} accumulation in deep and intermediate waters and sea overflows on marginal and continental areas which led to a rise of the CO{sub 2}-rich hypolimnion. (J.S.) 236 refs.

  15. Global patterns of organic carbon export and sequestration in the ocean (Arne Richter Award for Outstanding Young Scientists)

    Science.gov (United States)

    Henson, S.; Sanders, R.; Madsen, E.; Le Moigne, F.; Quartly, G.

    2012-04-01

    A major term in the global carbon cycle is the ocean's biological carbon pump which is dominated by sinking of small organic particles from the surface ocean to its interior. Here we examine global patterns in particle export efficiency (PEeff), the proportion of primary production that is exported from the surface ocean, and transfer efficiency (Teff), the fraction of exported organic matter that reaches the deep ocean. This is achieved through extrapolating from in situ estimates of particulate organic carbon export to the global scale using satellite-derived data. Global scale estimates derived from satellite data show, in keeping with earlier studies, that PEeff is high at high latitudes and low at low latitudes, but that Teff is low at high latitudes and high at low latitudes. However, in contrast to the relationship observed for deep biomineral fluxes in previous studies, we find that Teff is strongly negatively correlated with opal export flux from the upper ocean, but uncorrelated with calcium carbonate export flux. We hypothesise that the underlying factor governing the spatial patterns observed in Teff is ecosystem function, specifically the degree of recycling occurring in the upper ocean, rather than the availability of calcium carbonate for ballasting. Finally, our estimate of global integrated carbon export is only 50% of previous estimates. The lack of consensus amongst different methodologies on the strength of the biological carbon pump emphasises that our knowledge of a major planetary carbon flux remains incomplete.

  16. Ocean tides

    Science.gov (United States)

    Hendershott, M. C.

    1975-01-01

    A review of recent developments in the study of ocean tides and related phenomena is presented. Topics briefly discussed include: the mechanism by which tidal dissipation occurs; continental shelf, marginal sea, and baroclinic tides; estimation of the amount of energy stored in the tide; the distribution of energy over the ocean; the resonant frequencies and Q factors of oceanic normal modes; the relationship of earth tides and ocean tides; and numerical global tidal models.

  17. Ocean deoxygenation in a warming world.

    Science.gov (United States)

    Keeling, Ralph E; Körtzinger, Arne; Gruber, Nicolas

    2010-01-01

    Ocean warming and increased stratification of the upper ocean caused by global climate change will likely lead to declines in dissolved O2 in the ocean interior (ocean deoxygenation) with implications for ocean productivity, nutrient cycling, carbon cycling, and marine habitat. Ocean models predict declines of 1 to 7% in the global ocean O2 inventory over the next century, with declines continuing for a thousand years or more into the future. An important consequence may be an expansion in the area and volume of so-called oxygen minimum zones, where O2 levels are too low to support many macrofauna and profound changes in biogeochemical cycling occur. Significant deoxygenation has occurred over the past 50 years in the North Pacific and tropical oceans, suggesting larger changes are looming. The potential for larger O2 declines in the future suggests the need for an improved observing system for tracking ocean 02 changes.

  18. Biological productivity, terrigenous influence and noncrustal elements supply to the Central Indian Ocean Basin: Paleoceanography during the past approx. 1 Ma

    Digital Repository Service at National Institute of Oceanography (India)

    Pattan, J.N.; Masuzawa, T.; Borole, D.V.; Parthiban, G.; Jauhari, P.; Yamamoto, M.

    A 2 m-long sediment core from the siliceous ooze domain in the Central Indian Ocean Basin (CIOB; 13 degrees 03'S: 74 degrees 44'E; water depth 5099 m) is studied for calcium carbonate, total organic carbon, total nitrogen, biogenic opal, major...

  19. Inferring Broad Regulatory Biology from Time Course Data: Have We Reached an Upper Bound under Constraints Typical of In Vivo Studies?

    Directory of Open Access Journals (Sweden)

    Saurabh Vashishtha

    Full Text Available There is a growing appreciation for the network biology that regulates the coordinated expression of molecular and cellular markers however questions persist regarding the identifiability of these networks. Here we explore some of the issues relevant to recovering directed regulatory networks from time course data collected under experimental constraints typical of in vivo studies. NetSim simulations of sparsely connected biological networks were used to evaluate two simple feature selection techniques used in the construction of linear Ordinary Differential Equation (ODE models, namely truncation of terms versus latent vector projection. Performance was compared with ODE-based Time Series Network Identification (TSNI integral, and the information-theoretic Time-Delay ARACNE (TD-ARACNE. Projection-based techniques and TSNI integral outperformed truncation-based selection and TD-ARACNE on aggregate networks with edge densities of 10-30%, i.e. transcription factor, protein-protein cliques and immune signaling networks. All were more robust to noise than truncation-based feature selection. Performance was comparable on the in silico 10-node DREAM 3 network, a 5-node Yeast synthetic network designed for In vivo Reverse-engineering and Modeling Assessment (IRMA and a 9-node human HeLa cell cycle network of similar size and edge density. Performance was more sensitive to the number of time courses than to sample frequency and extrapolated better to larger networks by grouping experiments. In all cases performance declined rapidly in larger networks with lower edge density. Limited recovery and high false positive rates obtained overall bring into question our ability to generate informative time course data rather than the design of any particular reverse engineering algorithm.

  20. [Treatment of wrinkles of the upper lip by emulsified fat or "Nanofat": Biological and clinical study about 4 cases].

    Science.gov (United States)

    Mesguich Batel, F; Bertrand, B; Magalon, J; François, P; Velier, M; Veran, J; Mallet, S; Jouve, E; Sabatier, F; Casanova, D

    2018-02-01

    Emulsified fat injection showed its interest in aesthetic facial surgery. The adipose tissue harvested is mechanically emulsified and filtered. The suspension obtained is injected into the dermis through small diameter needles (27 to 30 gauges). The objective of our study was to evaluate the biological composition of emulsified fat and its clinical effectiveness in the treatment of peri-oral wrinkles in 4 patients aged 50 to 59 years. Each patient received an intradermal injection of emulsified fat in the peri-oral wrinkles prepared from abdominal fat under local anesthesia. The cell viability, stromal vascular fraction (FVS) composition in emulsified fat and the adipocyte differentiation capacity of mesenchymal stem cells (MSC) were studied. The clinical results were evaluated by standardized photographs, 3D microphotography, confocal microscopy, and self-evaluation of patient satisfaction over a period of 4 months. The biological study of the emulsified fat found a lysis of all the adipocytes. The mean number of FVS cells was 126,330±2758 cells by cc of emulsified fat with preserved cell viability (85.1±6.84 %) and a good proportion of regeneratives cells (18.77±6.2 %). The clinical study found a tendency to decrease the volume of wrinkles on standardized photography and 3D microphotography no significative. Patients were satisfied with treatment with an average score of 7±1.15/10 to 4 months. Intradermal injection of emulsified fat seems to be an interesting treatment of face wrinkles. Our study has shown its safety, but additional studies seems necessary to confirm its clinical efficacy. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

  1. Remote Sensing of Ocean Color

    Science.gov (United States)

    Dierssen, Heidi M.; Randolph, Kaylan

    The oceans cover over 70% of the earth's surface and the life inhabiting the oceans play an important role in shaping the earth's climate. Phytoplankton, the microscopic organisms in the surface ocean, are responsible for half of the photosynthesis on the planet. These organisms at the base of the food web take up light and carbon dioxide and fix carbon into biological structures releasing oxygen. Estimating the amount of microscopic phytoplankton and their associated primary productivity over the vast expanses of the ocean is extremely challenging from ships. However, as phytoplankton take up light for photosynthesis, they change the color of the surface ocean from blue to green. Such shifts in ocean color can be measured from sensors placed high above the sea on satellites or aircraft and is called "ocean color remote sensing." In open ocean waters, the ocean color is predominantly driven by the phytoplankton concentration and ocean color remote sensing has been used to estimate the amount of chlorophyll a, the primary light-absorbing pigment in all phytoplankton. For the last few decades, satellite data have been used to estimate large-scale patterns of chlorophyll and to model primary productivity across the global ocean from daily to interannual timescales. Such global estimates of chlorophyll and primary productivity have been integrated into climate models and illustrate the important feedbacks between ocean life and global climate processes. In coastal and estuarine systems, ocean color is significantly influenced by other light-absorbing and light-scattering components besides phytoplankton. New approaches have been developed to evaluate the ocean color in relationship to colored dissolved organic matter, suspended sediments, and even to characterize the bathymetry and composition of the seafloor in optically shallow waters. Ocean color measurements are increasingly being used for environmental monitoring of harmful algal blooms, critical coastal habitats

  2. Spiraling pathways of global deep waters to the surface of the Southern Ocean.

    Science.gov (United States)

    Tamsitt, Veronica; Drake, Henri F; Morrison, Adele K; Talley, Lynne D; Dufour, Carolina O; Gray, Alison R; Griffies, Stephen M; Mazloff, Matthew R; Sarmiento, Jorge L; Wang, Jinbo; Weijer, Wilbert

    2017-08-02

    Upwelling of global deep waters to the sea surface in the Southern Ocean closes the global overturning circulation and is fundamentally important for oceanic uptake of carbon and heat, nutrient resupply for sustaining oceanic biological production, and the melt rate of ice shelves. However, the exact pathways and role of topography in Southern Ocean upwelling remain largely unknown. Here we show detailed upwelling pathways in three dimensions, using hydrographic observations and particle tracking in high-resolution models. The analysis reveals that the northern-sourced deep waters enter the Antarctic Circumpolar Current via southward flow along the boundaries of the three ocean basins, before spiraling southeastward and upward through the Antarctic Circumpolar Current. Upwelling is greatly enhanced at five major topographic features, associated with vigorous mesoscale eddy activity. Deep water reaches the upper ocean predominantly south of the Antarctic Circumpolar Current, with a spatially nonuniform distribution. The timescale for half of the deep water to upwell from 30° S to the mixed layer is ~60-90 years.Deep waters of the Atlantic, Pacific and Indian Oceans upwell in the Southern Oceanbut the exact pathways are not fully characterized. Here the authors present a three dimensional view showing a spiralling southward path, with enhanced upwelling by eddy-transport at topographic hotspots.

  3. Using an international p53 mutation database as a foundation for an online laboratory in an upper level undergraduate biology class.

    Science.gov (United States)

    Melloy, Patricia G

    2015-01-01

    A two-part laboratory exercise was developed to enhance classroom instruction on the significance of p53 mutations in cancer development. Students were asked to mine key information from an international database of p53 genetic changes related to cancer, the IARC TP53 database. Using this database, students designed several data mining activities to look at the changes in the p53 gene from a number of perspectives, including potential cancer-causing agents leading to particular changes and the prevalence of certain p53 variations in certain cancers. In addition, students gained a global perspective on cancer prevalence in different parts of the world. Students learned how to use the database in the first part of the exercise, and then used that knowledge to search particular cancers and cancer-causing agents of their choosing in the second part of the exercise. Students also connected the information gathered from the p53 exercise to a previous laboratory exercise looking at risk factors for cancer development. The goal of the experience was to increase student knowledge of the link between p53 genetic variation and cancer. Students also were able to walk a similar path through the website as a cancer researcher using the database to enhance bench work-based experiments with complementary large-scale database p53 variation information. © 2014 The International Union of Biochemistry and Molecular Biology.

  4. Oceanic archipelagos

    DEFF Research Database (Denmark)

    Triantis, Kostas A.; Whittaker, Robert James; Fernández-Palacios, José María

    2016-01-01

    Since the contributions of Charles Darwin and Alfred Russel Wallace, oceanic archipelagos have played a central role in the development of biogeography. However, despite the critical influence of oceanic islands on ecological and evolutionary theory, our focus has remained limited to either the i...... of the archipelagic geological dynamics that can affect diversity at both the island and the archipelagic level. We also reaffirm that oceanic archipelagos are appropriate spatiotemporal units to frame analyses in order to understand large scale patterns of biodiversity....

  5. Ocean transportation

    National Research Council Canada - National Science Library

    Frankel, Ernst G; Marcus, Henry S

    1973-01-01

    .... This analysis starts with a review of ocean transportation demand and supply including projections of ship capacity demand and world shipbuilding capacity under various economic and political assumptions...

  6. Climate change feedbacks on future oceanic acidification

    OpenAIRE

    McNeil, Ben I.; Matear, Richard J.

    2011-01-01

    Oceanic anthropogenic CO2 uptake will decrease both the pH and the aragonite saturation state (Ωarag) of seawater leading to an oceanic acidification. However, the factors controlling future changes in pH and Ωarag are independent and will respond differently to oceanic climate change feedbacks such as ocean warming, circulation and biological changes. We examine the sensitivity of these two CO2-related parameters to climate change feedbacks within a coupled atmosphere-ocean model. The ocean ...

  7. Report of the EOS oceans panel to the payload panel

    Science.gov (United States)

    Abbott, Mark R.; Freilich, Michael H.

    1992-11-01

    The atmosphere and the ocean are the two great fluids of the earth system. Changes in the coupling of these two fluids will have a profound impact on the Earth's climate and biogeochemical systems. Although changes in atmospheric composition and dynamics are the usual focus of global climate models, it is apparent that the ocean plays a critical role in modulating the magnitude and rate of these changes. The ocean is responsible for nearly half of the poleward heat flux as well as for a significant portion of the uptake of atmospheric carbon dioxide. However, the processes governing the flux of materials and energy between the ocean atmosphere are poorly understood. Such processes include not only physical and chemical dynamics, but also biological processes which act to modify the chemical composition of the ocean as well as the trapping of solar energy as heat in the upper water column. Thus it is essential that the ocean be studied as a complete system of physical, chemical, and biological processes. Overlapping measurements must be made for at least 10-15 years to resolve critical low frequency fluctuations. The present EOS plan relies heavily on non-EOS entities to provide critical data sets for ocean studies. Although such partnerships are usually beneficial, there are risks that must be considered in terms of data coverage, quality, resolution, and availability. A simple replacement of an EOS sensor with a non-EOS sensor based on the fact that they both measure the same quantities will not guarantee that critical measurements will be made to address IPCC priorities in the area of ocean processes. EOS must continue to pursue appropriate methods to ensure that such partner — provided measurements meet scientific requirements. Such methods are analogous to contigencies applied in the area of schedules, cost, and performance for instrument projects. EOS must foster strong ties between US scientists and their foreign counterparts, in order to develop

  8. Ocean technology

    Digital Repository Service at National Institute of Oceanography (India)

    Peshwe, V.B.

    stream_size 2 stream_content_type text/plain stream_name Voices_Oceans_1996_113.pdf.txt stream_source_info Voices_Oceans_1996_113.pdf.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 ...

  9. Ocean acidification

    National Research Council Canada - National Science Library

    Gattuso, J.P; Hansson, L

    2011-01-01

    The fate of much of the CO 2 we produce will be to enter the ocean. In a sense, we are fortunate that ocean water is endowed with the capacity to absorb far more CO 2 per litre than were it salt free...

  10. How well does wind speed predict air-sea gas transfer in the sea ice zone? A synthesis of radon deficit profiles in the upper water column of the Arctic Ocean

    Science.gov (United States)

    Loose, B.; Kelly, R. P.; Bigdeli, A.; Williams, W.; Krishfield, R.; Rutgers van der Loeff, M.; Moran, S. B.

    2017-05-01

    We present 34 profiles of radon-deficit from the ice-ocean boundary layer of the Beaufort Sea. Including these 34, there are presently 58 published radon-deficit estimates of air-sea gas transfer velocity (k) in the Arctic Ocean; 52 of these estimates were derived from water covered by 10% sea ice or more. The average value of k collected since 2011 is 4.0 ± 1.2 m d-1. This exceeds the quadratic wind speed prediction of weighted kws = 2.85 m d-1 with mean-weighted wind speed of 6.4 m s-1. We show how ice cover changes the mixed-layer radon budget, and yields an "effective gas transfer velocity." We use these 58 estimates to statistically evaluate the suitability of a wind speed parameterization for k, when the ocean surface is ice covered. Whereas the six profiles taken from the open ocean indicate a statistically good fit to wind speed parameterizations, the same parameterizations could not reproduce k from the sea ice zone. We conclude that techniques for estimating k in the open ocean cannot be similarly applied to determine k in the presence of sea ice. The magnitude of k through gaps in the ice may reach high values as ice cover increases, possibly as a result of focused turbulence dissipation at openings in the free surface. These 58 profiles are presently the most complete set of estimates of k across seasons and variable ice cover; as dissolved tracer budgets they reflect air-sea gas exchange with no impact from air-ice gas exchange.

  11. A new look at ocean carbon remineralization for estimating deepwater sequestration

    DEFF Research Database (Denmark)

    Guidi, L.; Legendre, L.; Reygondeau, Gabriel

    2015-01-01

    provinces, where these estimates range between -50 and +100% of the commonly used globally uniform remineralization value. We apply the regionalized values to satellite-derived estimates of upper ocean POC export to calculate regionalized and ocean-wide deep carbon fluxes and sequestration. The resulting....... These results stress that variable remineralization and sequestration depth should be used to model ocean carbon sequestration and feedback on the atmosphere......The "biological carbon pump" causes carbon sequestration in deep waters by downward transfer of organic matter, mostly as particles. This mechanism depends to a great extent on the uptake of CO2 by marine plankton in surface waters and subsequent sinking of particulate organic carbon (POC) through...

  12. Replumbing of the Biological Pump caused by Millennial Climate Variability

    Science.gov (United States)

    Galbraith, E.; Sarmiento, J.

    2008-12-01

    It has been hypothesized that millennial-timescale variability in the biological pump was a critical instigator of glacial-interglacial cycles. However, even in the absence of changes in ecosystem function (e.g. due to iron fertilization), determining the mechanisms by which physical climate variability alters the biological pump is not simple. Changes in upper ocean circulation and deep water formation have previously been shown to alter both the downward flux of organic matter and the mass of respired carbon in the ocean interior, often in non- intuitive ways. For example, a reduced upward flux of nutrients at the global scale will decrease the global rate of export production, but it could either increase or decrease the respired carbon content of the ocean interior, depending on where the reduced upward flux of nutrients occurs. Furthermore, viable candidates for physical climate forcing are numerous, including changes in the westerly winds, changes in the depth of the thermocline, and changes in the formation rate of North Atlantic Deep Water, among others. We use a simple, prognostic, light-and temperature-dependent model of biogeochemical cycling within a state-of-the- art global coupled ocean-atmosphere model to examine the response of the biological pump to changes in the coupled Earth system over multiple centuries. The biogeochemical model explicitly distinguishes respired carbon from preformed and saturation carbon, allowing the activity of the biological pump to be clearly quantified. Changes are forced in the model by altering the background climate state, and by manipulating the flux of freshwater to the North Atlantic region. We show how these changes in the physical state of the coupled ocean-atmosphere system impact the distribution and mass of respired carbon in the ocean interior, and the relationship these changes bear to global patterns of export production via the redistribution of nutrients.

  13. The Southern Ocean biogeochemical divide.

    Science.gov (United States)

    Marinov, I; Gnanadesikan, A; Toggweiler, J R; Sarmiento, J L

    2006-06-22

    Modelling studies have demonstrated that the nutrient and carbon cycles in the Southern Ocean play a central role in setting the air-sea balance of CO(2) and global biological production. Box model studies first pointed out that an increase in nutrient utilization in the high latitudes results in a strong decrease in the atmospheric carbon dioxide partial pressure (pCO2). This early research led to two important ideas: high latitude regions are more important in determining atmospheric pCO2 than low latitudes, despite their much smaller area, and nutrient utilization and atmospheric pCO2 are tightly linked. Subsequent general circulation model simulations show that the Southern Ocean is the most important high latitude region in controlling pre-industrial atmospheric CO(2) because it serves as a lid to a larger volume of the deep ocean. Other studies point out the crucial role of the Southern Ocean in the uptake and storage of anthropogenic carbon dioxide and in controlling global biological production. Here we probe the system to determine whether certain regions of the Southern Ocean are more critical than others for air-sea CO(2) balance and the biological export production, by increasing surface nutrient drawdown in an ocean general circulation model. We demonstrate that atmospheric CO(2) and global biological export production are controlled by different regions of the Southern Ocean. The air-sea balance of carbon dioxide is controlled mainly by the biological pump and circulation in the Antarctic deep-water formation region, whereas global export production is controlled mainly by the biological pump and circulation in the Subantarctic intermediate and mode water formation region. The existence of this biogeochemical divide separating the Antarctic from the Subantarctic suggests that it may be possible for climate change or human intervention to modify one of these without greatly altering the other.

  14. Ocean energy

    International Nuclear Information System (INIS)

    2006-01-01

    This annual evaluation is a synthesis of works published in 2006. Comparisons are presented between the wind power performances and European Commission White Paper and Biomass action plan objectives. The sector covers the energy exploitation of all energy flows specifically supplied by the seas and oceans. At present, most efforts in both research and development and in experimental implementation are concentrated on tidal currents and wave power. 90% of today worldwide ocean energy production is represented by a single site: the Rance Tidal Power Plant. Ocean energies must face up two challenges: progress has to be made in finalizing and perfecting technologies and costs must be brought under control. (A.L.B.)

  15. Large Pelagics Biological Survey

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Large Pelagics Biological Survey (LPBS) collects additional length and weight information and body parts such as otoliths, caudal vertebrae, dorsal spines, and...

  16. Fishery Biology Database (AGDBS)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Basic biological data are the foundation on which all assessments of fisheries resources are built. These include parameters such as the size and age composition of...

  17. Molecular biology in marine science: Scientific questions, technological approaches, and practical implications

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1994-12-31

    This report describes molecular techniques that could be invaluable in addressing process-oriented problems in the ocean sciences that have perplexed oceanographers for decades, such as understanding the basis for biogeochemical processes, recruitment processes, upper-ocean dynamics, biological impacts of global warming, and ecological impacts of human activities. The coupling of highly sophisticated methods, such as satellite remote sensing, which permits synoptic monitoring of chemical, physical, and biological parameters over large areas, with the power of modern molecular tools for ``ground truthing`` at small scales could allow scientists to address questions about marine organisms and the ocean in which they live that could not be answered previously. Clearly, the marine sciences are on the threshold of an exciting new frontier of scientific discovery and economic opportunity.

  18. The Physics of Marine Biology.

    Science.gov (United States)

    Conn, Kathleen

    1992-01-01

    Discusses ways in which marine biology can be integrated into the physics classroom. Topics suggested for incorporation include the harmonic motion of ocean waves, ocean currents, the interaction of visible light with ocean water, pressure, light absorption, and sound transfer in water. (MDH)

  19. Deep Ocean Contribution to Sea Level Rise

    Science.gov (United States)

    Chang, L.; Sun, W.; Tang, H.; Wang, Q.

    2017-12-01

    The ocean temperature and salinity change in the upper 2000m can be detected by Argo floats, so we can know the steric height change of the ocean. But the ocean layers above 2000m represent only 50% of the total ocean volume. Although the temperature and salinity change are small compared to the upper ocean, the deep ocean contribution to sea level might be significant because of its large volume. There has been some research on the deep ocean rely on the very sparse situ observation and are limited to decadal and longer-term rates of change. The available observational data in the deep ocean are too spares to determine the temporal variability, and the long-term changes may have a bias. We will use the Argo date and combine the situ data and topographic data to estimate the temperature and salinity of the sea water below 2000m, so we can obtain a monthly data. We will analyze the seasonal and annual change of the steric height change due to the deep ocean between 2005 and 2016. And we will evaluate the result combination the present-day satellite and in situ observing systems. The deep ocean contribution can be inferred indirectly as the difference between the altimetry minus GRACE and Argo-based steric sea level.

  20. A review of biological studies sponsored by the Department of the Environment to assist feasibility studies of the disposal of heat generating radioactive waste in the deep ocean

    International Nuclear Information System (INIS)

    Allen, J.A.; Gale, G.

    1985-04-01

    The report review recent biological studies on the organisms of the deep sea and takes into account the physical and chemical parameters that influence them. Particular attention is devoted to studies funded by the Department of the Environment to determine the technical feasibility of disposing of high level radioactive wastes in the deep sea. Such quantitative information that exists concerning the input and output of organic material into the abyss is given. This information is related to the diversity, growth, size, and reproductive biology of the abyssal infauna and epifauna and to the organisms within the water column above. Life processes, under the influence of high pressure are discussed and related to the uptake by and release from organisms of radiochemicals. Gaps in our present knowledge of the total ecosystem are identified and recommendations for future studies made. (author)

  1. Ocean Acidification

    Science.gov (United States)

    Ocean and coastal acidification is an emerging issue caused by increasing amounts of carbon dioxide being absorbed by seawater. Changing seawater chemistry impacts marine life, ecosystem services, and humans. Learn what EPA is doing and what you can do.

  2. Ocean transportation

    National Research Council Canada - National Science Library

    Frankel, Ernst G; Marcus, Henry S

    1973-01-01

    .... The discussion of technology considers the ocean transportation system as a whole, and the composite subsystems such as hull, outfit, propulsion, cargo handling, automation, and control and interface technology...

  3. Ocean transportation

    National Research Council Canada - National Science Library

    Frankel, Ernst G; Marcus, Henry S

    1973-01-01

    .... In ocean transportation economics we present investment and operating costs as well as the results of a study of financing of shipping. Similarly, a discussion of government aid to shipping is presented.

  4. Ocean Color

    Data.gov (United States)

    National Aeronautics and Space Administration — Satellite-derived Ocean Color Data sets from historical and currently operational NASA and International Satellite missions including the NASA Coastal Zone Color...

  5. ONR Ocean Wave Dynamics Workshop

    Science.gov (United States)

    In anticipation of the start (in Fiscal Year 1988) of a new Office of Naval Research (ONR) Accelerated Research Initiative (ARI) on Ocean Surface Wave Dynamics, a workshop was held August 5-7, 1986, at Woods Hole, Mass., to discuss new ideas and directions of research. This new ARI on Ocean Surface Wave Dynamics is a 5-year effort that is organized by the ONR Physical Oceanography Program in cooperation with the ONR Fluid Mechanics Program and the Physical Oceanography Branch at the Naval Ocean Research and Development Activity (NORDA). The central theme is improvement of our understanding of the basic physics and dynamics of surface wave phenomena, with emphasis on the following areas: precise air-sea coupling mechanisms,dynamics of nonlinear wave-wave interaction under realistic environmental conditions,wave breaking and dissipation of energy,interaction between surface waves and upper ocean boundary layer dynamics, andsurface statistical and boundary layer coherent structures.

  6. Ocean Quality

    OpenAIRE

    Brevik, Roy Schjølberg; Jordheim, Nikolai; Martinsen, John Christian; Labori, Aleksander; Torjul, Aleksander Lelis

    2017-01-01

    Bacheloroppgave i Internasjonal Markedsføring fra ESADE i Spania, 2017 In this thesis we were going to answer the problem definition “which segments in the Spanish market should Ocean Quality target”. By doing so we started to collect data from secondary sources in order to find information about the industry Ocean Quality are operating in. After conducting the secondary research, we still lacked essential information about the existing competition in the aquaculture industry o...

  7. Climatic-oceanic forcing on the organic accumulation across the shelf during the Early Cambrian (Age 2 through 3) in the mid-upper Yangtze Block, NE Guizhou, South China

    Science.gov (United States)

    Yeasmin, Rumana; Chen, Daizhao; Fu, Yong; Wang, Jianguo; Guo, Zenghui; Guo, Chuan

    2017-02-01

    The organic-rich sediments were widely deposited over the entire Yangtze Block during the Early Cambrian (late Nemakit-Daldynian to Botomian). In the mid-upper Yangtze region, northeastern Guizhou, South China, they comprise, in ascending order, the Niutitang, Jiumenchong and lower Bianmachong formations which are dominated by black shales except the middle one characterized by interbedded shales-limestones. Three third-order depositional sequences are identified in the two studied sections located on the upper slope to basin of the open shelf. The organic-rich sediments were mostly deposited notably during transgressions on the shallower upper slope-margin (TOC up to 25 wt.%) where they are characterized by co-increases in C, P, Fe, and Ba concentrations, indicating the highest organic productivity and coupled C, P and Fe cycling there. In contrast, in the shelf basin, the concomitant organic-rich sediments yield lower organic (TOC Block within the north mid-low-latitude trade-wind zone during deposition (the Early Cambrian). As such, enhanced offshore currents driven by the trade winds could have further induced the upwelling of nutrient-rich deep waters along the shelf during the transgressions, although tended to wane onwards, leading to the tempo-spatial heterogeneities in organic production and redox state across the shelf sea.

  8. Characterizing post-industrial changes in the ocean carbon cycle in an Earth system model

    Energy Technology Data Exchange (ETDEWEB)

    Matsumoto, Katsumi; Tokos, Kathy S.; Chikamoto, Megumi O. (Geology and Geophysics, Univ. of Minnesota, MN (United States)), e-mail: katsumi@umn.edu; Ridgwell, Andy (School of Geographical Sciences, Univ. of Bristol, Bristol (United Kingdom))

    2010-10-22

    Understanding the oceanic uptake of carbon from the atmosphere is essential for better constraining the global budget, as well as for predicting the air-borne fraction of CO{sub 2} emissions and thus degree of climate change. Gaining this understanding is difficult, because the 'natural' carbon cycle, the part of the global carbon cycle unaltered by CO{sub 2} emissions, also responds to climate change and ocean acidification. Using a global climate model of intermediate complexity, we assess the evolution of the natural carbon cycle over the next few centuries. We find that physical mechanisms, particularly Atlantic meridional overturning circulation and gas solubility, alter the natural carbon cycle the most and lead to a significant reduction in the overall oceanic carbon uptake. Important biological mechanisms include reduced organic carbon export production due to reduced nutrient supply, increased organic carbon production due to higher temperatures and reduced CaCO{sub 3} production due to increased ocean acidification. A large ensemble of model experiments indicates that the most important source of uncertainty in ocean uptake projections in the near term future are the upper ocean vertical diffusivity and gas exchange coefficient. By year 2300, the model's climate sensitivity replaces these two and becomes the dominant factor as global warming continues

  9. Ocean acidification in a geoengineering context

    Science.gov (United States)

    Williamson, Phillip; Turley, Carol

    2012-01-01

    Fundamental changes to marine chemistry are occurring because of increasing carbon dioxide (CO2) in the atmosphere. Ocean acidity (H+ concentration) and bicarbonate ion concentrations are increasing, whereas carbonate ion concentrations are decreasing. There has already been an average pH decrease of 0.1 in the upper ocean, and continued unconstrained carbon emissions would further reduce average upper ocean pH by approximately 0.3 by 2100. Laboratory experiments, observations and projections indicate that such ocean acidification may have ecological and biogeochemical impacts that last for many thousands of years. The future magnitude of such effects will be very closely linked to atmospheric CO2; they will, therefore, depend on the success of emission reduction, and could also be constrained by geoengineering based on most carbon dioxide removal (CDR) techniques. However, some ocean-based CDR approaches would (if deployed on a climatically significant scale) re-locate acidification from the upper ocean to the seafloor or elsewhere in the ocean interior. If solar radiation management were to be the main policy response to counteract global warming, ocean acidification would continue to be driven by increases in atmospheric CO2, although with additional temperature-related effects on CO2 and CaCO3 solubility and terrestrial carbon sequestration. PMID:22869801

  10. Polonium-210 and lead-210 in the Southern Polar Ocean: Naturally occurring tracers of biological and hydrographical processes in the surface waters of the Antarctic Circumpolar Current and the Weddell Sea

    International Nuclear Information System (INIS)

    Friedrich, J.

    1997-01-01

    In this thesis the distribution of 210 Po and 210 Pb in the upper 600 m of the Antarctic Circumpolar Current and the Weddell Sea was investigated along north-south transects in austral spring and autumn. 210 Po and 210 Pb can serve as sensitive tracers for the special hydrographic conditions of the Antarctic Circumpolar Current and the Weddell Sea as well as for biological processes during phytoplankton blooms. The 210 Po/ 210 Pb disequilibrium was used as a tracer for particle export. This tracer integrates export on a timescale of 276 days because of the 138 day half-life of 210 Po and complements the 234 Th/ 238 U disequilibrium as another tracer for plankton production and export on a shorter timescale of several weeks. (orig.) [de

  11. Climate change feedbacks on future oceanic acidification

    International Nuclear Information System (INIS)

    McNeil, Ben I.; Matear, Richard J.

    2007-01-01

    Oceanic anthropogenic CO 2 uptake will decrease both the pH and the aragonite saturation state (Oarag) of seawater leading to an oceanic acidification. However, the factors controlling future changes in pH and Oarag are independent and will respond differently to oceanic climate change feedbacks such as ocean warming, circulation and biological changes. We examine the sensitivity of these two CO 2 -related parameters to climate change feedbacks within a coupled atmosphere-ocean model. The ocean warming feedback was found to dominate the climate change responses in the surface ocean. Although surface pH is projected to decrease relatively uniformly by about 0.3 by the year 2100, we find pH to be insensitive to climate change feedbacks, whereas Oarag is buffered by ∼15%. Ocean carbonate chemistry creates a situation whereby the direct pH changes due to ocean warming are almost cancelled by the pH changes associated with dissolved inorganic carbon concentrations changes via a reduction in CO 2 solubility from ocean warming. We show that the small climate change feedback on future surface ocean pH is independent to the amount of ocean warming. Our analysis therefore implies that future projections of surface ocean acidification only need to consider future atmospheric CO 2 levels, not climate change induced modifications in the ocean

  12. A comparison of fishery biology of jumbo flying squid,Dosidicus gigas outside three Exclusive Economic Zones in the Eastern Pacific Ocean

    Institute of Scientific and Technical Information of China (English)

    LIU Bilin; CHEN Xinjun; YI Qian

    2013-01-01

    Although many studies on the fishery biology of jumbo flying squid,Dosidicus gigas,have been conducted in the coastal areas within Exclusive Economic Zones (EEZs) of various countries due to its commercial and ecological importance,limited biological information is available from waters outside these EEZs.In this paper,we examined D.gigas fishery biology from waters outside Chilean,Peruvian and Costa Rican EEZs,based on the fishery data collected by Chinese jigging vessels during 2006 to 2010.The dominant mantle lengths of D.gigas were 350-450 mm,250-400 mm and 250-350 mm outside Chilean,Peruvian and Costa Rican EEZs,respectively.Size structure analysis show that a medium-sized group existed mostly in the waters outside the Chilean and Peruvian EEZs,whereas a small-sized group occurred mainly in the waters outside the Costa Rican EEZ.The longevity of the squid outside the Costa Rican EEZ was less than 10 months,while most of those outside Chilean and Peruvian EEZs were about 1-1.5 years and very few large individuals were 1.5-2 years old.A higher percentage of mature individuals existed outside Costa Rican EEZ implying the region as a potential spawning ground,while lower proportions of mature squid outside the Peruvian and Chilean EEZs indicated that spawning may be occurring outside our study area.Spatial differences in sizes at maturity of the squid are thought to be result from different environmental factors especially different temperature and nutrition among the three areas.Stomach-content analysis showed that cannibalism was important in the diet of D.gigas.Stress generated by jigging may increase the incidence of cannibalism.

  13. WATER TEMPERATURE and Other Data From Indian Ocean from 19760222 to 19910407 (NODC Accession 9400146)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The primary productivity and biological data in this accession were collected in the Indian Ocean by the Indian Ocean Data Center. Data was collected between...

  14. Seasonal variation of CaCO3 saturation state in bottom water of a biological hotspot in the Chukchi Sea, Arctic Ocean

    Directory of Open Access Journals (Sweden)

    M. Yamamoto-Kawai

    2016-11-01

    Full Text Available Distribution of calcium carbonate saturation state (Ω was observed in the Chukchi Sea in autumn 2012 and early summer 2013. Ω in bottom water ranged from 0.3 to 2.0 for aragonite and from 0.5 to 3.2 for calcite in 2012. In 2013, Ω in bottom water was 1.1–2.8 for aragonite and 1.7–4.4 for calcite. Aragonite and calcite undersaturation was found in high productivity regions in autumn 2012 but not in early summer 2013. Comparison with other parameters has indicated that biological processes – respiration and photosynthesis – are major factors controlling the regional and temporal variability of Ω. From these ship-based observations, we have obtained empirical equations to reconstruct Ω from temperature, salinity and apparent oxygen utilization. Using 2-year-round mooring data and these equations, we have reconstructed seasonal variation of Ω in bottom water in Hope Valley, a biological hotspot in the southern Chukchi Sea. Estimated Ω was high in spring and early summer, decreased in later summer, and remained relatively low in winter. Calculations indicated a possibility that bottom water could have been undersaturated for aragonite on an intermittent basis even in the pre-industrial period, and that anthropogenic CO2 has extended the period of aragonite undersaturation to more than 2-fold longer by now.

  15. The sequestration switch. Removing industrial CO2 by direct ocean absorption

    International Nuclear Information System (INIS)

    Ametistova, Lioudmila; Briden, James; Twidell, John

    2002-01-01

    This review paper considers direct injection of industrial CO 2 emissions into the mid-water oceanic column below 500 m depth. Such a process is a potential candidate for switching atmospheric carbon emissions directly to long term sequestration, thereby relieving the intermediate atmospheric burden. Given sufficient research justification, the argument is that harmful impact in both the Atmosphere and the biologically rich upper marine layer could be reduced. The paper aims to estimate the role that active intervention, through direct ocean CO 2 storage, could play and to outline further research and assessment for the strategy to be a viable option for climate change mitigation. The attractiveness of direct ocean injection lies in its bypassing of the Atmosphere and upper marine region, its relative permanence, its practicability using existing technologies and its quantification. The difficulties relate to the uncertainty of some fundamental scientific issues, such as plume dynamics, lowered pH of the exposed waters and associated ecological impact, the significant energy penalty associated with the necessary engineering plant and the uncertain costs. Moreover, there are considerable uncertainties regarding related international marine law. Development of the process would require acceptance of the evidence for climate change, strict requirements for large industrial consumers of fossil fuel to reduce CO 2 emissions into the Atmosphere and scientific evidence for the overall beneficial impact of ocean sequestration

  16. FY 1998 report on the results of R and D projects by local consortiums for immediate effects. Development of ocean-based artificial deep ocean water (DOW) upwelling devices and researches into enhancement of productivity of surface waters, CO2 fixation and biological effects of DOW; 1998 nendo yojo kaiyo shinsosui shusui system no kaihatsu to kaiyo hiyokuka, nisanka tanso kyushu oyobi seibutsu koka no kenkyu kaihatsu chosa hokokusho

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2000-03-01

    The R and D project is implemented for design, fabrication and installation of ocean-based artificial deep ocean water (DOW) upwelling devices which can take DOW at low cost in an ocean; experiments for enhancing productivity of ocean by adding DOW using mesocosms; and studying the biological effects of DOW for keeping freshness of marine products. DOW is successfully taken by the upwelling system from a depth of 800 m in a sea area 2,000 m or more in depth. The system has worked to perform its functions even when attacked by typhoons, which caused wave height of 10 m or more. For enhancing productivity of ocean, the culture experiments are conducted in a small-size, on-shore tank, and the mesocosm experiments in a harbor. The results indicate that addition of DOW increases the phytoplankton phase and its quantity. It is also observed that addition of iron ion further accelerates the fertilizing effect. The results of the experiments conducted in a harbor also indicate that DOW has the fertilizing effect, even in a very small quantity, increasing quantity of small zooplankton. No definite effect of DOW, liquid or ice, is observed for keeping freshness of sliced raw sea bream and bonito. (NEDO)

  17. Oceans Past

    DEFF Research Database (Denmark)

    Based on research for the History of Marine Animal Populations project, Oceans Past examines the complex relationship our forebears had with the sea and the animals that inhabit it. It presents eleven studies ranging from fisheries and invasive species to offshore technology and the study of marine...... environmental history, bringing together the perspectives of historians and marine scientists to enhance understanding of ocean management of the past, present and future. In doing so, it also highlights the influence that changes in marine ecosystems have upon the politics, welfare and culture of human...

  18. Ocean energy

    International Nuclear Information System (INIS)

    2009-01-01

    There are 5 different ways of harnessing ocean energy: tides, swells, currents, osmotic pressure and deep water thermal gradients. The tidal power sector is the most mature. A single French site - The Rance tidal power station (240 MW) which was commissioned in 1966 produces 90% of the world's ocean energy. Smaller scale power stations operate around the world, 10 are operating in the European Union and 5 are being tested. Underwater generators and wave energy converters are expanding. In France a 1 km 2 sea test platform is planned for 2010. (A.C.)

  19. BIOLOGY AND CPUE SPATIAL DISTRIBUTION OF ESCOLAR Lepidocybium flavobrunneum (Smith, 1843 IN EASTERN INDIAN OCEAN (EVOLVING FISHERIES: TODAY’S BY-CATCH IS TOMORROW’S TARGET CATCH

    Directory of Open Access Journals (Sweden)

    Fathur Rochman

    2016-12-01

    Full Text Available Discharge of by catch is a significant problem in world fishery. Every commercial fishery such as tuna longline has a suite of bycatch species, escolar fish (LEC. LEC as by catch product has received a little attention because of its lower economic value and given its importance as a secondary market. With time, however, market can become establish for this presently undesirable species. Acknowledging that today’s by catch might become tomorrow’s target fish. The aims of this study areto provide information on biological aspect and catch per unit of effort (CPUE spatial distribution of escolar (Lepidocybium flavobrunneum as by catch in Indonesian longline fishery operating in the Eastern Indian Ocean. Total escolar samples of 1,815 were taken from scientific observer data from 2011-2013. The study area of escolar was between 0.897-33.175°S and 85.366– 138.733°E of Eastern Indian Ocean. Results show that the escolar length (cmFL is distributed from 27-178 cmFL (median=83 cmFL, mode=85 cmFL, mean=83.95 cmFL and n= 1.812 and dominated by the size of 85 cmFL. The length weight relationship was determined to be W=0.0002FL2.2926(W in kg, FL in cm. In terms of CPUEs distribution, the lower CPUEs(1.0001 to 7.382 generally occurred in Western Australian, precisely on grid between 10-35°S and 85-110°E. These grids would be a potential for fishing LEC with the best time to catch in June to August.

  20. Physical and meteorological delayed-mode full-resolution data from the Tropical Atmosphere Ocean (TAO) array in the Equatorial Pacific

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Tropical Atmosphere Ocean (TAO) array of moored buoys spans the tropical Pacific. Moorings within the array measure surface meteorological and upper-ocean...

  1. The Biological carbon pump in the North Atlantic

    DEFF Research Database (Denmark)

    Sanders, Richard; Henson, Stephanie A.; Koski, Marja

    2014-01-01

    Mediated principally by the sinking of organic rich particles from the upper ocean, the Biological Carbon Pump (BCP) is a significant component of the global carbon cycle. It transfers roughly 11 Gt C yr−1 into the ocean’s interior and maintains atmospheric carbon dioxide at significantly lower......, including both the magnitude of the downward flux and the ecological, chemical and physical processes by which it is sustained and controlled. Our lack of detailed mechanistic understanding has also hindered modelling attempts to quantify and predict changes to the BCP. In this paper, we assess current...

  2. Ocean Acidification

    Science.gov (United States)

    Ludwig, Claudia; Orellana, Mónica V.; DeVault, Megan; Simon, Zac; Baliga, Nitin

    2015-01-01

    The curriculum module described in this article addresses the global issue of ocean acidification (OA) (Feely 2009; Figure 1). OA is a harmful consequence of excess carbon dioxide (CO[subscript 2]) in the atmosphere and poses a threat to marine life, both algae and animal. This module seeks to teach and help students master the cross-disciplinary…

  3. Three-year summary report of biological monitoring at the Southwest Ocean dredged-material disposal site and additional locations off Grays Harbor, Washington, 1990--1992

    Energy Technology Data Exchange (ETDEWEB)

    Antrim, L.D.; Shreffler, D.K.; Pearson, W.H.; Cullinan, V.I. [Battelle Marine Research Lab., Sequim, WA (United States)

    1992-12-01

    The Grays Harbor Navigation Improvement Project was initiated to improve navigation by widening and deepening the federal channel at Grays Harbor. Dredged-material disposal sites were selected after an extensive review process that included inter-agency agreements, biological surveys, other laboratory and field studies, and preparation of environmental impact statements The Southwest Site, was designated to receive materials dredged during annual maintenance dredging as well as the initial construction phase of the project. The Southwest Site was located, and the disposal operations designed, primarily to avoid impacts to Dungeness crab. The Final Environmental Impact Statement Supplement for the project incorporated a Site Monitoring Plan in which a tiered approach to disposal site monitoring was recommended. Under Tier I of the Site Monitoring Plan, Dungeness crab densities are monitored to confirm that large aggregations of newly settled Dungeness crab have not moved onto the Southwest Site. Tier 2 entails an increased sampling effort to determine whether a change in disposal operations is needed. Four epibenthic surveys using beam trawls were conducted in 1990, 1991, and 1992 at the Southwest Site and North Reference area, where high crab concentrations were found in the spring of 1985. Survey results during these three years prompted no Tier 2 activities. Epibenthic surveys were also conducted at two nearshore sites where construction of sediment berms has been proposed. This work is summarized in an appendix to this report.

  4. Recent Ship, Satellite and Autonomous Observations of Southern Ocean Eddies

    Science.gov (United States)

    Strutton, P. G.; Moreau, S.; Llort, J.; Phillips, H. E.; Patel, R.; Della Penna, A.; Langlais, C.; Lenton, A.; Matear, R.; Dawson, H.; Boyd, P. W.

    2016-12-01

    The Southern Ocean is the area of greatest uncertainty regarding the exchange of CO2 between the ocean and atmosphere. It is also a region of abundant energetic eddies that significantly impact circulation and biogeochemistry. In the Indian sector of the Southern Ocean, cyclonic eddies are unusual in that they are upwelling favorable, as for cyclonic eddies elsewhere, but during summer they are low in silicate and phytoplankton biomass. The reverse is true for anticyclonic eddies in that they have counter-intuitive positive chlorophyll anomalies in summer. Similar but less obvious patterns occur in the Pacific and Atlantic sectors. Using ship, satellite and autonomous observations in the region south of Australia, the physical and biogeochemical signatures of both types of eddies were documented in 2016. A cyclonic eddy that lived for seven weeks exhibited doming isopycnals indicative of upwelling. However, low surface silicate and chlorophyll concentrations appeared to be characteristic of surface waters to the south where the eddy formed. Higher chlorophyll was confined to filaments at the eddy edge. Surface nitrate and phosphate concentrations were more than sufficient for a bloom of non-siliceous phytoplankton to occur. Acoustic observations from a high resolution TRIAXUS transect through the eddy documented high zooplankton biomass in the upper 150m. It is hypothesized that a non-diatom bloom was prevented by grazing pressure, but light may have also been an important limiting resource in late summer (April). Two SOCCOM floats that were deployed in the eddy field continued to monitor the physics, nitrate and bio-optics through the transition to winter. These observations across complementary platforms have identified and then explained the reason for these unexpected biological anomalies in an energetic and globally important region of the global ocean. Understanding the role of eddies in this region will be critical to the representation of mesoscale

  5. Ocean energies

    International Nuclear Information System (INIS)

    Charlier, R.H.; Justus, J.R.

    1993-01-01

    This timely volume provides a comprehensive review of current technology for all ocean energies. It opens with an analysis of ocean thermal energy conversion (OTEC), with and without the use of an intermediate fluid. The historical and economic background is reviewed, and the geographical areas in which this energy could be utilized are pinpointed. The production of hydrogen as a side product, and environmental consequences of OTEC plants are considered. The competitiveness of OTEC with conventional sources of energy is analysed. Optimisation, current research and development potential are also examined. Separate chapters provide a detailed examination of other ocean energy sources. The possible harnessing of solar ponds, ocean currents, and power derived from salinity differences is considered. There is a fascinating study of marine winds, and the question of using the ocean tides as a source of energy is examined, focussing on a number of tidal power plant projects, including data gathered from China, Australia, Great Britain, Korea and the USSR. Wave energy extraction has excited recent interest and activity, with a number of experimental pilot plants being built in northern Europe. This topic is discussed at length in view of its greater chance of implementation. Finally, geothermal and biomass energy are considered, and an assessment of their future is given. The authors also distinguished between energy schemes which might be valuable in less-industrialized regions of the world, but uneconomical in the developed countries. A large number of illustrations support the text. This book will be of particular interest to energy economists, engineers, geologists and oceanographers, and to environmentalists and environmental engineers

  6. South African southern ocean research programme

    CSIR Research Space (South Africa)

    SASCAR

    1987-01-01

    Full Text Available This document describes the South African National Antarctic Research Programme's (SANARP) physical, chemical and biological Southern Ocean research programme. The programme has three main components: ecological studies of the Prince Edward Islands...

  7. Proceedings of oceans '91

    International Nuclear Information System (INIS)

    Anon.

    1991-01-01

    This volume contains the proceedings of the Oceans '91 Conference. Topics addressed include: ocean energy conversion, marine communications and navigation, ocean wave energy conversion, environmental modeling, global climate change, ocean minerals technology, oil spill technology, and submersible vehicles

  8. Ocean uptake of carbon dioxide

    International Nuclear Information System (INIS)

    Peng, Tsung-Hung; Takahashi, Taro

    1993-01-01

    Factors controlling the capacity of the ocean for taking up anthropogenic C0 2 include carbon chemistry, distribution of alkalinity, pCO 2 and total concentration of dissolved C0 2 , sea-air pCO 2 difference, gas exchange rate across the sea-air interface, biological carbon pump, ocean water circulation and mixing, and dissolution of carbonate in deep sea sediments. A general review of these processes is given and models of ocean-atmosphere system based on our understanding of these regulating processes axe used to estimate the magnitude of C0 2 uptake by the ocean. We conclude that the ocean can absorb up to 35% of the fossil fuel emission. Direct measurements show that 55% Of C0 2 from fossil fuel burning remains in the atmosphere. The remaining 10% is not accounted for by atmospheric increases and ocean uptake. In addition, it is estimated that an amount equivalent to 30% of recent annual fossil fuel emissions is released into the atmosphere as a result of deforestation and farming. To balance global carbon budget, a sizable carbon sink besides the ocean is needed. Storage of carbon in terrestrial biosphere as a result of C0 2 fertilization is a potential candidate for such missing carbon sinks

  9. Ocean acidification

    International Nuclear Information System (INIS)

    Soubelet, Helene; Veyre, Philippe; Monnoyer-Smith, Laurence

    2017-09-01

    This brief publication first recalls and outlines that ocean acidification is expected to increase, and will result in severe ecological impacts (more fragile coral reefs, migration of species, and so on), and therefore social and economic impacts. This issue is particularly important for France who possesses the second exclusive maritime area in the world. The various impacts of ocean acidification on living species is described, notably for phytoplankton, coral reefs, algae, molluscs, and fishes. Social and economic impacts are also briefly presented: tourism, protection against risks (notably by coral reefs), shellfish aquaculture and fishing. Issues to be addressed by scientific research are evoked: interaction between elements of an ecosystem and between different ecosystems, multi-stress effects all along organism lifetime, vulnerability and adaptability of human societies

  10. Depth of origin of ocean-circulation-induced magnetic signals

    Science.gov (United States)

    Irrgang, Christopher; Saynisch-Wagner, Jan; Thomas, Maik

    2018-01-01

    As the world ocean moves through the ambient geomagnetic core field, electric currents are generated in the entire ocean basin. These oceanic electric currents induce weak magnetic signals that are principally observable outside of the ocean and allow inferences about large-scale oceanic transports of water, heat, and salinity. The ocean-induced magnetic field is an integral quantity and, to first order, it is proportional to depth-integrated and conductivity-weighted ocean currents. However, the specific contribution of oceanic transports at different depths to the motional induction process remains unclear and is examined in this study. We show that large-scale motional induction due to the general ocean circulation is dominantly generated by ocean currents in the upper 2000 m of the ocean basin. In particular, our findings allow relating regional patterns of the oceanic magnetic field to corresponding oceanic transports at different depths. Ocean currents below 3000 m, in contrast, only contribute a small fraction to the ocean-induced magnetic signal strength with values up to 0.2 nT at sea surface and less than 0.1 nT at the Swarm satellite altitude. Thereby, potential satellite observations of ocean-circulation-induced magnetic signals are found to be likely insensitive to deep ocean currents. Furthermore, it is shown that annual temporal variations of the ocean-induced magnetic field in the region of the Antarctic Circumpolar Current contain information about sub-surface ocean currents below 1000 m with intra-annual periods. Specifically, ocean currents with sub-monthly periods dominate the annual temporal variability of the ocean-induced magnetic field.

  11. The Role of External Inputs and Internal Cycling in Shaping the Global Ocean Cobalt Distribution: Insights From the First Cobalt Biogeochemical Model

    Science.gov (United States)

    Tagliabue, Alessandro; Hawco, Nicholas J.; Bundy, Randelle M.; Landing, William M.; Milne, Angela; Morton, Peter L.; Saito, Mak A.

    2018-04-01

    Cobalt is an important micronutrient for ocean microbes as it is present in vitamin B12 and is a co-factor in various metalloenzymes that catalyze cellular processes. Moreover, when seawater availability of cobalt is compared to biological demands, cobalt emerges as being depleted in seawater, pointing to a potentially important limiting role. To properly account for the potential biological role for cobalt, there is therefore a need to understand the processes driving the biogeochemical cycling of cobalt and, in particular, the balance between external inputs and internal cycling. To do so, we developed the first cobalt model within a state-of-the-art three-dimensional global ocean biogeochemical model. Overall, our model does a good job in reproducing measurements with a correlation coefficient of >0.7 in the surface and >0.5 at depth. We find that continental margins are the dominant source of cobalt, with a crucial role played by supply under low bottom-water oxygen conditions. The basin-scale distribution of cobalt supplied from margins is facilitated by the activity of manganese-oxidizing bacteria being suppressed under low oxygen and low temperatures, which extends the residence time of cobalt. Overall, we find a residence time of 7 and 250 years in the upper 250 m and global ocean, respectively. Importantly, we find that the dominant internal resupply process switches from regeneration and recycling of particulate cobalt to dissolution of scavenged cobalt between the upper ocean and the ocean interior. Our model highlights key regions of the ocean where biological activity may be most sensitive to cobalt availability.

  12. Ocean carbon uptake and storage

    International Nuclear Information System (INIS)

    Tilbrook, Bronte

    2007-01-01

    Full text: The ocean contains about 95% of the carbon in the atmosphere, ocean and land biosphere system, and is of fundamental importance in regulating atmospheric carbon dioxide concentrations. In the 1990s an international research effort involving Australia was established to determine the uptake and storage of anthropogenic C02 for all major ocean basins. The research showed that about 118 of the 244 + 20 billion tons of the anthropogenic carbon emitted through fossil fuel burning and cement production has been stored in the ocean since preindustrial times, thus helping reduce the rate of increase in atmospheric C02. The research also showed the terrestrial biosphere has been a small net source of C02 (39 ± 28 billion tons carbon) to the atmosphere over the same period. About 60% of the total ocean inventory of the anthropogenic C02 was found in the Southern Hemisphere, with most in the 30 0 S to 50 0 S latitude band. This mid-latitude band is where surface waters are subducted as Mode and Intermediate waters, which is a major pathway controlling ocean C02 uptake. High storage (23% of the total) also occurs in the North Atlantic, associated with deep water formation in that basin. The ocean uptake and storage is expected to increase in the coming decades as atmospheric C02 concentrations rise. However, a number of feedback mechanisms associated with surface warming, changes in circulation, and biological effects are likely to impact on the uptake capacity. The accumulation or storage-of the C02 in the ocean is also the major driver of ocean acidification with potential to disrupt marine ecosystems. This talk will describe the current understanding of the ocean C02 uptake and storage and a new international research strategy to detect how the ocean uptake and storage will evolve on interannual through decadal scales. Understanding the ocean response to increasing atmospheric C02 will be a key element in managing future C02 increases and establishing

  13. State of Climate 2011 - Global Ocean Phytoplankton

    Science.gov (United States)

    Siegel, D. A.; Antoine, D.; Behrenfeld, M. J.; d'Andon, O. H. Fanton; Fields, E.; Franz, B. A.; Goryl, P.; Maritorena, S.; McClain, C. R.; Wang, M.; hide

    2012-01-01

    Phytoplankton photosynthesis in the sun lit upper layer of the global ocean is the overwhelmingly dominant source of organic matter that fuels marine ecosystems. Phytoplankton contribute roughly half of the global (land and ocean) net primary production (NPP; gross photosynthesis minus plant respiration) and phytoplankton carbon fixation is the primary conduit through which atmospheric CO2 concentrations interact with the ocean s carbon cycle. Phytoplankton productivity depends on the availability of sunlight, macronutrients (e.g., nitrogen, phosphorous), and micronutrients (e.g., iron), and thus is sensitive to climate-driven changes in the delivery of these resources to the euphotic zone

  14. Climate change impact on future ocean acidification

    International Nuclear Information System (INIS)

    McNeil, Ben

    2007-01-01

    Full text: Elevated atmospheric C02 levels and associated uptake by the ocean is changing its carbon chemistry, leading to an acidification. The implications of future ocean acidification on the marine ecosystem are unclear but seemingly detrimental particularly to those organisms and phytoplankton that secrete calcium carbonate (like corals). Here we present new results from the Australian CSIRO General Circulation Model that predicts the changing nature of oceanic carbon chemistry in response to future climate change feedbacks (circulation, temperature and biological). We will discuss the implications of future ocean acidification and the potential implications on Australia's marine ecosystems

  15. Ocean images in music compositions and folksongs

    Science.gov (United States)

    Liu, C. M.

    2017-12-01

    In general, ocean study usually ranges from physical oceanography, chemical oceanography, marine biology, marine geology, and other related fields. In addition to pure scientific fields, ocean phenomenon influence not only human mood but also the shaping of local cultures. In this paper, we present some ocean images and concepts appeared in music compositions and folksongs to show the mixing, influence and interaction between them. This may give a novel way not for science teachers but also music teachers to deliver the knowledge of ocean science in classes.

  16. Characterizing the chaotic nature of ocean ventilation

    Science.gov (United States)

    MacGilchrist, Graeme A.; Marshall, David P.; Johnson, Helen L.; Lique, Camille; Thomas, Matthew

    2017-09-01

    Ventilation of the upper ocean plays an important role in climate variability on interannual to decadal timescales by influencing the exchange of heat and carbon dioxide between the atmosphere and ocean. The turbulent nature of ocean circulation, manifest in a vigorous mesoscale eddy field, means that pathways of ventilation, once thought to be quasi-laminar, are in fact highly chaotic. We characterize the chaotic nature of ventilation pathways according to a nondimensional "filamentation number," which estimates the reduction in filament width of a ventilated fluid parcel due to mesoscale strain. In the subtropical North Atlantic of an eddy-permitting ocean model, the filamentation number is large everywhere across three upper ocean density surfaces—implying highly chaotic ventilation pathways—and increases with depth. By mapping surface ocean properties onto these density surfaces, we directly resolve the highly filamented structure and confirm that the filamentation number captures its spatial variability. These results have implications for the spreading of atmospherically-derived tracers into the ocean interior.

  17. Biogeochemistry of the North Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    DileepKumar, M.

    Biogeochemistry is a subject wherein geochemical and biological processes occurring in the upper layers of the Earth, including atmosphere, are studied together. Many of the climatically important gases influencing the Earth’s radiation budget...

  18. OceanGLOBE: an Outdoor Research and Environmental Education Program for K-12 Students

    Science.gov (United States)

    Perry, R. B.; Hamner, W. M.

    2006-12-01

    OceanGLOBE is an outdoor environmental research and education program for upper elementary, middle and high school students, supplemented by online instructional materials that are available without charge to any educator. OceanGLOBE was piloted in 1995 with support from a National Science Foundation Teacher Enhancement project, "Leadership in Marine Science" (award no.ESI-9454413 to UCLA). Continuing support by a second NSF Teacher Enhancement project (award no. ESI-9819424 to UCLA) and by COSEE-West (NSF awards OCE-215506 to UCLA and OCE-0215497 to USC) has enabled OceanGLOBE to expand to a growing number of schools and to provide an increasingly robust collection of marine science instructional materials on its website, http://www.msc.ucla.edu/oceanglobe/ OceanGLOBE provides a mechanism for students to conduct inquiry-based, hands-on marine science research, providing experiences that anchor the national and state science content standards learned in the classroom. Students regularly collect environmental and biological data from a beach site over an extended period of time. In the classroom they organize, graph and analyze their data, which can lead to a variety of student-created science products. Beach research is supported by instructional marine science materials on the OceanGLOBE website. These online materials also can be used in the classroom independent of the field component. Annotated PowerPoint slide shows explain research protocols and provide marine science content. Field guides and photographs of marine organisms (with emphasis on the Southern California Bight) and a growing collection of classroom investigations (applicable to any ocean location) support the science content presented in the beach research program and slide shows. In summary, OceanGLOBE is a comprehensive learning package grounded in hands-on, outdoor marine science research project in which students are the principal investigators. By doing scientific work repetitively over an

  19. Southern Ocean Mixed-Layer Seasonal and Interannual Variations From Combined Satellite and In Situ Data

    Science.gov (United States)

    Buongiorno Nardelli, B.; Guinehut, S.; Verbrugge, N.; Cotroneo, Y.; Zambianchi, E.; Iudicone, D.

    2017-12-01

    The depth of the upper ocean mixed layer provides fundamental information on the amount of seawater that directly interacts with the atmosphere. Its space-time variability modulates water mass formation and carbon sequestration processes related to both the physical and biological pumps. These processes are particularly relevant in the Southern Ocean, where surface mixed-layer depth estimates are generally obtained either as climatological fields derived from in situ observations or through numerical simulations. Here we demonstrate that weekly observation-based reconstructions can be used to describe the variations of the mixed-layer depth in the upper ocean over a range of space and time scales. We compare and validate four different products obtained by combining satellite measurements of the sea surface temperature, salinity, and dynamic topography and in situ Argo profiles. We also compute an ensemble mean and use the corresponding spread to estimate mixed-layer depth uncertainties and to identify the more reliable products. The analysis points out the advantage of synergistic approaches that include in input the sea surface salinity observations obtained through a multivariate optimal interpolation. Corresponding data allow to assess mixed-layer depth seasonal and interannual variability. Specifically, the maximum correlations between mixed-layer anomalies and the Southern Annular Mode are found at different time lags, related to distinct summer/winter responses in the Antarctic Intermediate Water and Sub-Antarctic Mode Waters main formation areas.

  20. Dissolved inorganic carbon, temperature, salinity and other variables collected from discrete sample and profile observations using CTD, bottle and other instruments from the Hakuho Maru in the Indian Ocean, North Pacific Ocean and South Pacific Ocean from 2001-12-08 to 2002-01-19 (NODC Accession 0112347)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112347 includes biological, chemical, discrete sample, physical and profile data collected from Hakuho Maru in the Indian Ocean, North Pacific Ocean...

  1. Dissolved inorganic carbon, temperature, salinity and other variables collected from discrete sample and profile observations using CTD, bottle and other instruments from the Hakuho Maru in the Indian Ocean, North Pacific Ocean and South Pacific Ocean from 2001-12-08 to 2002-01-19 (NODC Accession 0113547)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0113547 includes biological, chemical, discrete sample, physical and profile data collected from Hakuho Maru in the Indian Ocean, North Pacific Ocean...

  2. Ocean eddies and climate predictability.

    Science.gov (United States)

    Kirtman, Ben P; Perlin, Natalie; Siqueira, Leo

    2017-12-01

    A suite of coupled climate model simulations and experiments are used to examine how resolved mesoscale ocean features affect aspects of climate variability, air-sea interactions, and predictability. In combination with control simulations, experiments with the interactive ensemble coupling strategy are used to further amplify the role of the oceanic mesoscale field and the associated air-sea feedbacks and predictability. The basic intent of the interactive ensemble coupling strategy is to reduce the atmospheric noise at the air-sea interface, allowing an assessment of how noise affects the variability, and in this case, it is also used to diagnose predictability from the perspective of signal-to-noise ratios. The climate variability is assessed from the perspective of sea surface temperature (SST) variance ratios, and it is shown that, unsurprisingly, mesoscale variability significantly increases SST variance. Perhaps surprising is the fact that the presence of mesoscale ocean features even further enhances the SST variance in the interactive ensemble simulation beyond what would be expected from simple linear arguments. Changes in the air-sea coupling between simulations are assessed using pointwise convective rainfall-SST and convective rainfall-SST tendency correlations and again emphasize how the oceanic mesoscale alters the local association between convective rainfall and SST. Understanding the possible relationships between the SST-forced signal and the weather noise is critically important in climate predictability. We use the interactive ensemble simulations to diagnose this relationship, and we find that the presence of mesoscale ocean features significantly enhances this link particularly in ocean eddy rich regions. Finally, we use signal-to-noise ratios to show that the ocean mesoscale activity increases model estimated predictability in terms of convective precipitation and atmospheric upper tropospheric circulation.

  3. Upper Gastrointestinal (GI) Series

    Science.gov (United States)

    ... standard barium upper GI series, which uses only barium a double-contrast upper GI series, which uses both air and ... evenly coat your upper GI tract with the barium. If you are having a double-contrast study, you will swallow gas-forming crystals that ...

  4. Exploring the southern ocean response to climate change

    Science.gov (United States)

    Martinson, Douglas G.; Rind, David; Parkinson, Claire

    1993-01-01

    The purpose of this project was to couple a regional (Southern Ocean) ocean/sea ice model to the existing Goddard Institute for Space Science (GISS) atmospheric general circulation model (GCM). This modification recognizes: the relative isolation of the Southern Ocean; the need to account, prognostically, for the significant air/sea/ice interaction through all involved components; and the advantage of translating the atmospheric lower boundary (typically the rapidly changing ocean surface) to a level that is consistent with the physical response times governing the system evolution (that is, to the base of the fast responding ocean surface layer). The deeper ocean beneath this layer varies on time scales several orders of magnitude slower than the atmosphere and surface ocean, and therefore the boundary between the upper and deep ocean represents a more reasonable fixed boundary condition.

  5. The study of the ocean from space

    Energy Technology Data Exchange (ETDEWEB)

    Novogrudskii, B V; Skliarov, V E; Fedorov, K N; Shifrin, K S

    1978-01-01

    The application of earth satellites and manned spacecraft to the study of the world's oceans is reviewed. Attention is given to the atmospheric transfer function in the visible, near-IR, middle-IR and microwave regions and the use of satellites in ocean data acquisition and transmission systems. The measurement of sea level and the topography of the ocean surface by means of orbital radar altimeters is discussed, together with IR and microwave measurements of ocean surface temperature and the study of surface roughness, surface evidence of internal waves, oil pollution and ice fields. Consideration is also given to the determination of ocean chlorophyll content and color distribution, coastal region characteristics, ocean salinity and other biological parameters from space.

  6. Progress Report Abstracts. Oceanic Biology Program.

    Science.gov (United States)

    1982-12-01

    consists of phototubes looking upward and downward, can be placed from subsurface to 200 m depth. It is connected to the laboratory via a hard wire link...Zelver, N., Dobb, D. E. and Nelson, C. R., "Influence of Bio- fouling and Biofouling Control Techniques on Corrosion of Copper- Nikel Tubes

  7. Biological processes of the northern Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Madhupratap, M.; Parulekar, A.H.

    . Nitrogen import, on decay of extensive blooms of Trichodesmium, appears to be another mechanism through which production increases in the eastern Arabian Sea. Zooplankton abundances usually match trends in phytoplankton production. However, at times...

  8. Biological Sample Monitoring Database (BSMDBS)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Biological Sample Monitoring Database System (BSMDBS) was developed for the Northeast Fisheries Regional Office and Science Center (NER/NEFSC) to record and...

  9. Design and Operation of Automated Ice-Tethered Profilers for Real-Time Seawater Observations in the Polar Oceans

    National Research Council Canada - National Science Library

    Toole, J; Proshutinsky, A; Krishfield, R; Doherty, K; Frye, Daniel E; Hammar, T; Kemp, J; Peters, D; Heydt, K. von der

    2006-01-01

    An automated, easily-deployed Ice-Tethered Profiler (ITP) has been developed for deployment on perennial sea ice in polar oceans to measure changes in upper ocean temperature and salinity in all seasons...

  10. Response of the equatorial Pacific to chlorophyll pigment in a mixed layer isopycnal ocean general circulation model

    Digital Repository Service at National Institute of Oceanography (India)

    Nakamoto, S.; PrasannaKumar, S.; Oberhuber, J.M.; Ishizaka, J.; Muneyama, K.; Frouin, R.

    The influence of phytoplankton on the upper ocean dynamics and thermodynamics in the equatorial Pacific is investigated using an isopycnal ocean general circulation model (OPYC) coupled with a mixed layer model and remotely sensed chlorophyll...

  11. Planet Ocean

    Science.gov (United States)

    Afonso, Isabel

    2014-05-01

    A more adequate name for Planet Earth could be Planet Ocean, seeing that ocean water covers more than seventy percent of the planet's surface and plays a fundamental role in the survival of almost all living species. Actually, oceans are aqueous solutions of extraordinary importance due to its direct implications in the current living conditions of our planet and its potential role on the continuity of life as well, as long as we know how to respect the limits of its immense but finite capacities. We may therefore state that natural aqueous solutions are excellent contexts for the approach and further understanding of many important chemical concepts, whether they be of chemical equilibrium, acid-base reactions, solubility and oxidation-reduction reactions. The topic of the 2014 edition of GIFT ('Our Changing Planet') will explore some of the recent complex changes of our environment, subjects that have been lately included in Chemistry teaching programs. This is particularly relevant on high school programs, with themes such as 'Earth Atmosphere: radiation, matter and structure', 'From Atmosphere to the Ocean: solutions on Earth and to Earth', 'Spring Waters and Public Water Supply: Water acidity and alkalinity'. These are the subjects that I want to develop on my school project with my pupils. Geographically, our school is located near the sea in a region where a stream flows into the sea. Besides that, our school water comes from a borehole which shows that the quality of the water we use is of significant importance. This project will establish and implement several procedures that, supported by physical and chemical analysis, will monitor the quality of water - not only the water used in our school, but also the surrounding waters (stream and beach water). The samples will be collected in the borehole of the school, in the stream near the school and in the beach of Carcavelos. Several physical-chemical characteristics related to the quality of the water will

  12. The Southern Ocean's role in ocean circulation and climate transients

    Science.gov (United States)

    Thompson, A. F.; Stewart, A.; Hines, S.; Adkins, J. F.

    2017-12-01

    The ventilation of deep and intermediate density classes at the surface of the Southern Ocean impacts water mass modification and the air-sea exchange of heat and trace gases, which in turn influences the global overturning circulation and Earth's climate. Zonal variability occurs along the Antarctic Circumpolar Current and the Antarctic margins related to flow-topography interactions, variations in surface boundary conditions, and exchange with northern basins. Information about these zonal variations, and their impact on mass and tracer transport, are suppressed when the overturning is depicted as a two-dimensional (depth-latitude) streamfunction. Here we present an idealized, multi-basin, time-dependent circulation model that applies residual circulation theory in the Southern Ocean and allows for zonal water mass transfer between different ocean basins. This model efficiently determines the temporal evolution of the ocean's stratification, ventilation and overturning strength in response to perturbations in the external forcing. With this model we explore the dynamics that lead to transitions in the circulation structure between multiple, isolated cells and a three-dimensional, "figure-of-eight," circulation in which traditional upper and lower cells are interleaved. The transient model is also used to support a mechanistic explanation of the hemispheric asymmetry and phase lag associated with Dansgaard-Oeschger (DO) events during the last glacial period. In particular, the 200 year lag in southern hemisphere temperatures, following a perturbation in North Atlantic deep water formation, depends critically on the migration of Southern Ocean isopycnal outcropping in response to low-latitude stratification changes. Our results provide a self-consistent dynamical framework to explain various ocean overturning transitions that have occurred over the Earth's last 100,000 years, and motivate an exploration of these mechanisms in more sophisticated climate models.

  13. Oceanic forcing of coral reefs.

    Science.gov (United States)

    Lowe, Ryan J; Falter, James L

    2015-01-01

    Although the oceans play a fundamental role in shaping the distribution and function of coral reefs worldwide, a modern understanding of the complex interactions between ocean and reef processes is still only emerging. These dynamics are especially challenging owing to both the broad range of spatial scales (less than a meter to hundreds of kilometers) and the complex physical and biological feedbacks involved. Here, we review recent advances in our understanding of these processes, ranging from the small-scale mechanics of flow around coral communities and their influence on nutrient exchange to larger, reef-scale patterns of wave- and tide-driven circulation and their effects on reef water quality and perceived rates of metabolism. We also examine regional-scale drivers of reefs such as coastal upwelling, internal waves, and extreme disturbances such as cyclones. Our goal is to show how a wide range of ocean-driven processes ultimately shape the growth and metabolism of coral reefs.

  14. Ocean Uses: Hawaii (PROUA)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This Pacific Regional Ocean Uses Atlas (PROUA) Project is an innovative partnership between NOAA and the Bureau of Ocean Energy Management (BOEM) designed to...

  15. How can present and future satellite missions support scientific studies that address ocean acidification?

    Science.gov (United States)

    Salisbury, Joseph; Vandemark, Douglas; Jonsson, Bror; Balch, William; Chakraborty, Sumit; Lohrenz, Steven; Chapron, Bertrand; Hales, Burke; Mannino, Antonio; Mathis, Jeremy T.; Reul, Nicolas; Signorini, Sergio; Wanninkhof, Rik; Yates, Kimberly K.

    2016-01-01

    Space-based observations offer unique capabilities for studying spatial and temporal dynamics of the upper ocean inorganic carbon cycle and, in turn, supporting research tied to ocean acidification (OA). Satellite sensors measuring sea surface temperature, color, salinity, wind, waves, currents, and sea level enable a fuller understanding of a range of physical, chemical, and biological phenomena that drive regional OA dynamics as well as the potentially varied impacts of carbon cycle change on a broad range of ecosystems. Here, we update and expand on previous work that addresses the benefits of space-based assets for OA and carbonate system studies. Carbonate chemistry and the key processes controlling surface ocean OA variability are reviewed. Synthesis of present satellite data streams and their utility in this arena are discussed, as are opportunities on the horizon for using new satellite sensors with increased spectral, temporal, and/or spatial resolution. We outline applications that include the ability to track the biochemically dynamic nature of water masses, to map coral reefs at higher resolution, to discern functional phytoplankton groups and their relationships to acid perturbations, and to track processes that contribute to acid variation near the land-ocean interface.

  16. The role of diatom resting spores in pelagic-benthic coupling in the Southern Ocean

    Science.gov (United States)

    Rembauville, Mathieu; Blain, Stéphane; Manno, Clara; Tarling, Geraint; Thompson, Anu; Wolff, George; Salter, Ian

    2018-05-01

    Natural iron fertilization downstream of Southern Ocean island plateaus supports large phytoplankton blooms and promotes carbon export from the mixed layer. In addition to sequestering atmospheric CO2, the biological carbon pump also supplies organic matter (OM) to deep-ocean ecosystems. Although the total flux of OM arriving at the seafloor sets the energy input to the system, the chemical nature of OM is also of significance. However, a quantitative framework linking ecological flux vectors to OM composition is currently lacking. In the present study we report the lipid composition of export fluxes collected by five moored sediment traps deployed in contrasting productivity regimes of Southern Ocean island systems (Kerguelen, Crozet and South Georgia) and compile them with quantitative data on diatom and faecal pellet fluxes. At the three naturally iron-fertilized sites, the relative contribution of labile lipids (mono- and polyunsaturated fatty acids, unsaturated fatty alcohols) is 2-4 times higher than at low productivity sites. There is a strong attenuation of labile components as a function of depth, irrespective of productivity. The three island systems also display regional characteristics in lipid export. An enrichment of zooplankton dietary sterols, such as C27Δ5, at South Georgia is consistent with high zooplankton and krill biomass in the region and the importance of faecal pellets to particulate organic carbon (POC) flux. There is a strong association of diatom resting spore fluxes that dominate productive flux regimes with energy-rich unsaturated fatty acids. At the Kerguelen Plateau we provide a statistical framework to link seasonal variation in ecological flux vectors and lipid composition over a complete annual cycle. Our analyses demonstrate that ecological processes in the upper ocean, e.g. resting spore formation and grazing, not only impact the magnitude and stoichiometry of the Southern Ocean biological pump, but also regulate the

  17. The Indian Ocean as a Connector

    Science.gov (United States)

    Durgadoo, J. V.; Biastoch, A.; Boning, C. W.

    2016-02-01

    The Indian Ocean is a conduit for the upper ocean flow of the global thermohaline circulation. It receives water from the Pacific Ocean through the Indonesian throughflow and the Tasman leakage, and exports water into the Atlantic by means of Agulhas leakage. A small contribution from the northern Indian Ocean is also detectable within Agulhas leakage. Changes on different timescales in the various components of the Pacific inflows and the Atlantic outflow have been reported. Little is known on the role of the Indian Ocean circulation in communicating changes from the Pacific into the Atlantic, let alone any eventual alterations in response to climate change. The precise routes and timescales of Indonesian throughflow, Tasman leakage, Red Sea and Persian Gulf Waters towards the Atlantic are examined in a Lagrangian framework within a high-resolution global ocean model. In this presentation, the following questions are addressed: How are Pacific waters modified in the Indian Ocean before reaching the Agulhas system? On what timescale is water that enters the Indian Ocean from the Pacific flushed out? How important are detours in the Bay of Bengal and Arabian Sea?

  18. Ocean climate coupling in the tropical Pacific Ocean over the past fifty years: implications and feedbacks

    International Nuclear Information System (INIS)

    Wang, Xiujun; Murtugudde, Ragu; Busalacchi, Antonio J.

    2007-01-01

    Full text: The tropical Pacific plays an important role in climate because of its significant air-sea exchanges of heat, freshwater, and carbon dioxide (C02), and because of its direct linkage to climate variability. There are two dominant modes of climate variability in the Tropics: the El Nino-Southern Oscillation (ENSO) phenomenon and the Pacific Decadal Oscillation (PDO). There has been strong evidence of ENSO and PDO impacts on tropical Pacific physics and biogeochemistry, including heat content, ocean circulation (McPhaden and Zhang 2002), and carbon fluxes (Feely ef al. 2006; Wang ef al. 2006). In this study, we apply a basin-scale ocean circulation-ecosystem-carbon model (Wang ef al. 2006) to study the responses of the tropical Pacific ecosystem, biogeochemistry and carbon cycle to climate forcing over the past 50 years. The model produces strong spatial and temporal variability in surface nutrient concentration, phytoplankton biomass, carbon uptake, and sea-to-air C02 flux, which are largely associated with the ENSO phenomenon. In particular, the size of the tropical Pacific C02 source is large during the ENSO cold phase but small during the ENSO warm phase. There are significant decadal variations in tropical Pacific carbon fluxes, reflecting physical and biogeochemical changes associated with the 1977 and 1997/98 PDO shifts. The 1977 regime shift caused 1 0 C warming in sea surface temperature and -50% reduction in surface iron concentration in the Niho3.4 area, leading to decreased biological activity. While there is a large decrease in phytoplankton growth and biomass, reduction in carbon uptake is smaller than expected, due to phytoplankton photoadaption, which increases the carbon to chlorophyll ratio in the upper euphotic zone and enhances sub-surface production. Photoadaption also results in clearer water near the surface, leading to less heating near the ocean surface and allowing more solar radiation to penetrate the subsurface. Our studies

  19. Diurnal variability of surface fluxes at an oceanic station in the Bay of Bengal

    Digital Repository Service at National Institute of Oceanography (India)

    Sarma, Y.V.B.; Rao, D.P.

    Diurnal variability of the surface fluxes and ocean heat content was studied using the time-series data on marine surface meteorological parameters and upper ocean temperature collected at an oceanic station in the Bay of Bengal during 1st to 8th...

  20. Consensuses and discrepancies of basin-scale ocean heat content changes in different ocean analyses

    Science.gov (United States)

    Wang, Gongjie; Cheng, Lijing; Abraham, John; Li, Chongyin

    2018-04-01

    Inconsistent global/basin ocean heat content (OHC) changes were found in different ocean subsurface temperature analyses, especially in recent studies related to the slowdown in global surface temperature rise. This finding challenges the reliability of the ocean subsurface temperature analyses and motivates a more comprehensive inter-comparison between the analyses. Here we compare the OHC changes in three ocean analyses (Ishii, EN4 and IAP) to investigate the uncertainty in OHC in four major ocean basins from decadal to multi-decadal scales. First, all products show an increase of OHC since 1970 in each ocean basin revealing a robust warming, although the warming rates are not identical. The geographical patterns, the key modes and the vertical structure of OHC changes are consistent among the three datasets, implying that the main OHC variabilities can be robustly represented. However, large discrepancies are found in the percentage of basinal ocean heating related to the global ocean, with the largest differences in the Pacific and Southern Ocean. Meanwhile, we find a large discrepancy of ocean heat storage in different layers, especially within 300-700 m in the Pacific and Southern Oceans. Furthermore, the near surface analysis of Ishii and IAP are consistent with sea surface temperature (SST) products, but EN4 is found to underestimate the long-term trend. Compared with ocean heat storage derived from the atmospheric budget equation, all products show consistent seasonal cycles of OHC in the upper 1500 m especially during 2008 to 2012. Overall, our analyses further the understanding of the observed OHC variations, and we recommend a careful quantification of errors in the ocean analyses.

  1. Physical, chemical, biological, geophysical, and meteorological data collected in the Arctic Ocean and Chukchi Sea in support of the Chukchi Sea Environmental Studies Program (CSESP) from 2007 to 2014 (NODC Accession 0124308)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set was collected as part of the Chukchi Sea Environmental Studies Program (CSESP), a multi-year, interdisciplinary ecological study focused on areas in...

  2. Physical, chemical and biological CTD and bottle data from R/V Thomas G. Thompson cruise TN278 in eastern tropical North Pacific Ocean from March 19 to April 20, 2012 (NODC Accession 0109846)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This report contains data from R/V Thomas G. Thompson cruise TN278 to the eastern tropical north pacific oxygen deficient zone. The objective of the cruise was to...

  3. Physical and biological data collected off the Florida coast in the North Atlantic Ocean and the Gulf of Mexico as part of the Harmful Algal Bloom Historical Database from February 5, 1954 to December 30, 1998 (NODC Accession 0000585)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In the later part of 1999, a relational Microsoft Access database was created to accommodate a wide range of data on the phytoplankton Karenia brevis. This database,...

  4. Physical, Chemical, and Biological CTD and Bottle data from NATHANIEL B. PALMER in Eastern Tropical South Pacific Ocean near Peru/Chile from 2013-06-24 to 2013-07-22 (NCEI Accession 0128141)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This report contains data from R/V Nathaniel B. Palmer cruise NBP 1305 to the eastern tropical south pacific oxygen deficient zone. The objective of the cruise was...

  5. Biological, chemical, and physical data from CTD/XCTD from five Japanese R/Vs in the North Pacific Ocean and other marginal basins from 1993 to 2003 (NODC Accession 0002199)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Japan Meteorological Agency (JMA) has been carrying out oceanographic and marine meteorological observations on board research vessels, at the coastal water...

  6. Decrease in oceanic crustal thickness since the breakup of Pangaea

    Science.gov (United States)

    van Avendonk, Harm J. A.; Davis, Joshua K.; Harding, Jennifer L.; Lawver, Lawrence A.

    2017-01-01

    Earth's mantle has cooled by 6-11 °C every 100 million years since the Archaean, 2.5 billion years ago. In more recent times, the surface heat loss that led to this temperature drop may have been enhanced by plate-tectonic processes, such as continental breakup, the continuous creation of oceanic lithosphere at mid-ocean ridges and subduction at deep-sea trenches. Here we use a compilation of marine seismic refraction data from ocean basins globally to analyse changes in the thickness of oceanic crust over time. We find that oceanic crust formed in the mid-Jurassic, about 170 million years ago, is 1.7 km thicker on average than crust produced along the present-day mid-ocean ridge system. If a higher mantle temperature is the cause of thicker Jurassic ocean crust, the upper mantle may have cooled by 15-20 °C per 100 million years over this time period. The difference between this and the long-term mantle cooling rate indeed suggests that modern plate tectonics coincide with greater mantle heat loss. We also find that the increase of ocean crustal thickness with plate age is stronger in the Indian and Atlantic oceans compared with the Pacific Ocean. This observation supports the idea that upper mantle temperature in the Jurassic was higher in the wake of the fragmented supercontinent Pangaea due to the effect of continental insulation.

  7. Increase in acidifying water in the western Arctic Ocean

    Science.gov (United States)

    Qi, Di; Chen, Liqi; Chen, Baoshan; Gao, Zhongyong; Zhong, Wenli; Feely, Richard A.; Anderson, Leif G.; Sun, Heng; Chen, Jianfang; Chen, Min; Zhan, Liyang; Zhang, Yuanhui; Cai, Wei-Jun

    2017-02-01

    The uptake of anthropogenic CO2 by the ocean decreases seawater pH and carbonate mineral aragonite saturation state (Ωarag), a process known as Ocean Acidification (OA). This can be detrimental to marine organisms and ecosystems. The Arctic Ocean is particularly sensitive to climate change and aragonite is expected to become undersaturated (Ωarag Pacific Winter Water transport, driven by an anomalous circulation pattern and sea-ice retreat, is primarily responsible for the expansion, although local carbon recycling and anthropogenic CO2 uptake have also contributed. These results indicate more rapid acidification is occurring in the Arctic Ocean than the Pacific and Atlantic oceans, with the western Arctic Ocean the first open-ocean region with large-scale expansion of `acidified’ water directly observed in the upper water column.

  8. Enhanced deep ocean ventilation and oxygenation with global warming

    Science.gov (United States)

    Froelicher, T. L.; Jaccard, S.; Dunne, J. P.; Paynter, D.; Gruber, N.

    2014-12-01

    Twenty-first century coupled climate model simulations, observations from the recent past, and theoretical arguments suggest a consistent trend towards warmer ocean temperatures and fresher polar surface oceans in response to increased radiative forcing resulting in increased upper ocean stratification and reduced ventilation and oxygenation of the deep ocean. Paleo-proxy records of the warming at the end of the last ice age, however, suggests a different outcome, namely a better ventilated and oxygenated deep ocean with global warming. Here we use a four thousand year global warming simulation from a comprehensive Earth System Model (GFDL ESM2M) to show that this conundrum is a consequence of different rates of warming and that the deep ocean is actually better ventilated and oxygenated in a future warmer equilibrated climate consistent with paleo-proxy records. The enhanced deep ocean ventilation in the Southern Ocean occurs in spite of increased positive surface buoyancy fluxes and a constancy of the Southern Hemisphere westerly winds - circumstances that would otherwise be expected to lead to a reduction in deep ocean ventilation. This ventilation recovery occurs through a global scale interaction of the Atlantic Meridional Overturning Circulation undergoing a multi-centennial recovery after an initial century of transient decrease and transports salinity-rich waters inform the subtropical surface ocean to the Southern Ocean interior on multi-century timescales. The subsequent upwelling of salinity-rich waters in the Southern Ocean strips away the freshwater cap that maintains vertical stability and increases open ocean convection and the formation of Antarctic Bottom Waters. As a result, the global ocean oxygen content and the nutrient supply from the deep ocean to the surface are higher in a warmer ocean. The implications for past and future changes in ocean heat and carbon storage will be discussed.

  9. Ocean Prediction Center

    Science.gov (United States)

    Social Media Facebook Twitter YouTube Search Search For Go NWS All NOAA Weather Analysis & Forecasts of Commerce Ocean Prediction Center National Oceanic and Atmospheric Administration Analysis & Unified Surface Analysis Ocean Ocean Products Ice & Icebergs NIC Ice Products NAIS Iceberg Analysis

  10. Nonvariceal upper gastrointestinal bleeding

    International Nuclear Information System (INIS)

    Burke, Stephen J.; Weldon, Derik; Sun, Shiliang; Golzarian, Jafar

    2007-01-01

    Nonvariceal upper gastrointestinal bleeding (NUGB) remains a major medical problem even after advances in medical therapy with gastric acid suppression and cyclooxygenase (COX-2) inhibitors. Although the incidence of upper gastrointestinal bleeding presenting to the emergency room has slightly decreased, similar decreases in overall mortality and rebleeding rate have not been experienced over the last few decades. Many causes of upper gastrointestinal bleeding have been identified and will be reviewed. Endoscopic, radiographic and angiographic modalities continue to form the basis of the diagnosis of upper gastrointestinal bleeding with new research in the field of CT angiography to diagnose gastrointestinal bleeding. Endoscopic and angiographic treatment modalities will be highlighted, emphasizing a multi-modality treatment plan for upper gastrointestinal bleeding. (orig.)

  11. Nonvariceal upper gastrointestinal bleeding

    Energy Technology Data Exchange (ETDEWEB)

    Burke, Stephen J.; Weldon, Derik; Sun, Shiliang [University of Iowa, Department of Radiology, Iowa, IA (United States); Golzarian, Jafar [University of Iowa, Department of Radiology, Iowa, IA (United States); University of Iowa, Department of Radiology, Carver College of Medicine, Iowa, IA (United States)

    2007-07-15

    Nonvariceal upper gastrointestinal bleeding (NUGB) remains a major medical problem even after advances in medical therapy with gastric acid suppression and cyclooxygenase (COX-2) inhibitors. Although the incidence of upper gastrointestinal bleeding presenting to the emergency room has slightly decreased, similar decreases in overall mortality and rebleeding rate have not been experienced over the last few decades. Many causes of upper gastrointestinal bleeding have been identified and will be reviewed. Endoscopic, radiographic and angiographic modalities continue to form the basis of the diagnosis of upper gastrointestinal bleeding with new research in the field of CT angiography to diagnose gastrointestinal bleeding. Endoscopic and angiographic treatment modalities will be highlighted, emphasizing a multi-modality treatment plan for upper gastrointestinal bleeding. (orig.)

  12. Modulation of the Southern Ocean cadmium isotope signature by ocean circulation and primary productivity

    NARCIS (Netherlands)

    Abouchami, W.; Galer, S.J.G.; de Baar, H.J.W.; Alderkamp, A.C.; Middag, R.; Laan, P.; Feldmann, H.; Andreae, M.O.

    2011-01-01

    The High Nutrient Low Chlorophyll (HNLC) Southern Ocean plays a key role in regulating the biological pump and the global carbon cycle. Here we examine the efficacy of stable cadmium (Cd) isotope fractionation for detecting differences in biological productivity between regions. Our results show

  13. Electromagnetic exploration of the oceanic mantle.

    Science.gov (United States)

    Utada, Hisashi

    2015-01-01

    Electromagnetic exploration is a geophysical method for examining the Earth's interior through observations of natural or artificial electromagnetic field fluctuations. The method has been in practice for more than 70 years, and 40 years ago it was first applied to ocean areas. During the past few decades, there has been noticeable progress in the methods of instrumentation, data acquisition (observation), data processing and inversion. Due to this progress, applications of this method to oceanic regions have revealed electrical features of the oceanic upper mantle down to depths of several hundred kilometers for different geologic and tectonic environments such as areas around mid-oceanic ridges, areas around hot-spot volcanoes, subduction zones, and normal ocean areas between mid-oceanic ridges and subduction zones. All these results estimate the distribution of the electrical conductivity in the oceanic mantle, which is key for understanding the dynamics and evolution of the Earth together with different physical properties obtained through other geophysical methods such as seismological techniques.

  14. Enhancing Ocean Research Data Access

    Science.gov (United States)

    Chandler, Cynthia; Groman, Robert; Shepherd, Adam; Allison, Molly; Arko, Robert; Chen, Yu; Fox, Peter; Glover, David; Hitzler, Pascal; Leadbetter, Adam; Narock, Thomas; West, Patrick; Wiebe, Peter

    2014-05-01

    The Biological and Chemical Oceanography Data Management Office (BCO-DMO) works in partnership with ocean science investigators to publish data from research projects funded by the Biological and Chemical Oceanography Sections and the Office of Polar Programs Antarctic Organisms & Ecosystems Program at the U.S. National Science Foundation. Since 2006, researchers have been contributing data to the BCO-DMO data system, and it has developed into a rich repository of data from ocean, coastal and Great Lakes research programs. While the ultimate goal of the BCO-DMO is to ensure preservation of NSF funded project data and to provide open access to those data, achievement of those goals is attained through a series of related phases that benefits from active collaboration and cooperation with a large community of research scientists as well as curators of data and information at complementary data repositories. The BCO-DMO is just one of many intermediate data management centers created to facilitate long-term preservation of data and improve access to ocean research data. Through partnerships with other data management professionals and active involvement in local and global initiatives, BCO-DMO staff members are working to enhance access to ocean research data available from the online BCO-DMO data system. Continuing efforts in use of controlled vocabulary terms, development of ontology design patterns and publication of content as Linked Open Data are contributing to improved discovery and availability of BCO-DMO curated data and increased interoperability of related content available from distributed repositories. We will demonstrate how Semantic Web technologies (e.g. RDF/XML, SKOS, OWL and SPARQL) have been integrated into BCO-DMO data access and delivery systems to better serve the ocean research community and to contribute to an expanding global knowledge network.

  15. Biological, chemical and other data collected from station Humboldt Bay Pier by Humboldt State University and assembled by Central and Northern California Coastal Ocean Observing System (CeNCOOS) in the Northeast Pacific Ocean from 2012-12-13 to 2017-06-23 (NCEI Accession 0163750)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NCEI Accession 0163750 contains oceanographic and surface meteorological data in netCDF formatted files, which follow the Climate and Forecast metadata convention...

  16. 2015 Oregon Department of Geology and Mineral Industries (DOGAMI) Oregon Lidar: Upper Rogue 3DEP

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Quantum Spatial collected Light Detection and Ranging (LiDAR) data for the Oregon LiDAR Consortium (OLC) Upper Rogue 2015 study area. The collection of high...

  17. 2015 Oregon Department of Geology and Mineral Industries (DOGAMI) Oregon Lidar DEM: Upper Rogue 3DEP

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Quantum Spatial collected Light Detection and Ranging (LiDAR) data for the Oregon LiDAR Consortium (OLC) Upper Rogue 2015 study area. The collection of high...

  18. 2012 Puget Sound LiDAR Consortium (PSLC) Topographic LiDAR: Upper Naches River, Washington

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Watershed Sciences, Inc. (WSI) collected Light Detection and Ranging (LiDAR) data of the Upper Naches River Valley and Nile Slide area of interest on September 30th,...

  19. Radioactivity in the oceans

    International Nuclear Information System (INIS)

    Templeton, W.L.

    1979-01-01

    While the revised ''Definition and Recommendations'' of the International Atomic Energy Agency (IAEA) restricts the dumping of the radioactive wastes that exceed specified concentration/mass limits, the acceptance of the concept of applying the release rate limits as developed by the IAEA provides a rational basis for further considering the emplacement of radioactive wastes in seabed as an attractive and acceptable alternative to terrestrial geological repositories. The technical basis for the present radiological assessment is on release rate limits and not on dumping rates. However, to meet the present requirements of the London Convention, it is necessary to express to Definition in terms of the concentration in a single site and the assumed upper limit on mass dumping rate at a single site of 100,000 tons/year with the added proviso of release rate limits for the finite ocean volume of 10 17 m 3 . This results in the concentration limits of a) 1 Ci/ton for α-emitters but limited to 10 -1 Ci/ton 226 Ra and supported 210 Po; b) 10 2 Ci/ton for β/γ-emitters with half-lives of at least 0.5 yr (excluding 3 H) and the mixtures of β/γ-emitters of unknown half-lives; and c) 10 6 Ci/ton for 3 H and the β/γ-emitters with half-lives less than 0.5 yr. (Yamashita, S.)

  20. The anatomy and ontogeny of the head, neck, pectoral, and upper limb muscles of Lemur catta and Propithecus coquereli (primates): discussion on the parallelism between ontogeny and phylogeny and implications for evolutionary and developmental biology.

    Science.gov (United States)

    Diogo, Rui; Molnar, Julia L; Smith, Timothy D

    2014-08-01

    Most anatomical studies of primates focus on skeletal tissues, but muscular anatomy can provide valuable information about phylogeny, functional specializations, and evolution. Herein, we present the first detailed description of the head, neck, pectoral, and upper limb muscles of the fetal lemuriforms Lemur catta (Lemuridae) and Propithecus coquereli (Indriidae). These two species belong to the suborder Strepsirrhini, which is often presumed to possess some plesiomorphic anatomical features within primates. We compare the muscular anatomy of the fetuses with that of infants and adults and discuss the evolutionary and developmental implications. The fetal anatomy reflects a phylogenetically more plesiomorphic condition in nine of the muscles we studied and a more derived condition in only two, supporting a parallel between ontogeny and phylogeny. The derived exceptions concern muscles with additional insertions in the fetus which are lost in adults of the same species, that is, flexor carpi radialis inserts on metacarpal III and levator claviculae inserts on the clavicle. Interestingly, these two muscles are involved in movements of the pectoral girdle and upper limb, which are mainly important for activities in later stages of life, such as locomotion and prey capture, rather than activities in fetal life. Accordingly, our findings suggest that some exceptions to the "ontogeny parallels phylogeny" rule are probably driven more by ontogenetic constraints than by adaptive plasticity. © 2014 Wiley Periodicals, Inc.

  1. Aquatic biology studies

    International Nuclear Information System (INIS)

    Anon.

    1976-01-01

    Aquatic biology studies focused on studying the hydrothermal effects of Par Pond reservoir on periphyton, plankton, zooplankton, macrophytes, human pathogens, and microbial activity; the variability between the artificial streams of the Flowing Streams Laboratory and Upper Three Runs Creek; and the bacterial production of methane in Savannah River Plant aquatic systems

  2. Tests of Parameterized Langmuir Circulation Mixing in the Oceans Surface Mixed Layer II

    Science.gov (United States)

    2017-08-11

    inertial oscillations in the ocean are governed by three-dimensional processes that are not accounted for in a one-dimensional simulation , and it was...Unlimited 52 Paul Martin (228) 688-5447 Recent large-eddy simulations (LES) of Langmuir circulation (LC) within the surface mixed layer (SML) of...used in the Navy Coastal Ocean Model (NCOM) and tested for (a) a simple wind-mixing case, (b) simulations of the upper ocean thermal structure at Ocean

  3. Studying ocean acidification in the Arctic Ocean

    Science.gov (United States)

    Robbins, Lisa

    2012-01-01

    The U.S. Geological Survey (USGS) partnership with the U.S. Coast Guard Ice Breaker Healey and its United Nations Convention Law of the Sea (UNCLOS) cruises has produced new synoptic data from samples collected in the Arctic Ocean and insights into the patterns and extent of ocean acidification. This framework of foundational geochemical information will help inform our understanding of potential risks to Arctic resources due to ocean acidification.

  4. Biophysical processes in the Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Mc; Murtugudde, R.; Vialard, J.; Vinayachandran, P.N.; Wiggert, J.D.; Hood, R.R.; Shankar, D.; Shetye, S.R.

    Ocean Biogeochemical Processes and Ecological Variability Geophysical Monograph Series 185 Copyright 200� by the American Geophysical Union. 10.102�/2008GM000768 Biophysical Processes in the Indian Ocean J. P. McCreary, 1 R. Murtugudde, 2 J. Vialard, 3...) also plots the upper-layer thickness, h 1 , from the model of McCreary et al. [1��3] (hereinafter referred to as MKM); h 1 simulates the structure of the top of the actual thermocline reasonably well, except that it is somewhat too thin from 5...

  5. Impact of hydrothermalism on the ocean iron cycle.

    Science.gov (United States)

    Tagliabue, Alessandro; Resing, Joseph

    2016-11-28

    As the iron supplied from hydrothermalism is ultimately ventilated in the iron-limited Southern Ocean, it plays an important role in the ocean biological carbon pump. We deploy a set of focused sensitivity experiments with a state of the art global model of the ocean to examine the processes that regulate the lifetime of hydrothermal iron and the role of different ridge systems in governing the hydrothermal impact on the Southern Ocean biological carbon pump. Using GEOTRACES section data, we find that stabilization of hydrothermal iron is important in some, but not all regions. The impact on the Southern Ocean biological carbon pump is dominated by poorly explored southern ridge systems, highlighting the need for future exploration in this region. We find inter-basin differences in the isopycnal layer onto which hydrothermal Fe is supplied between the Atlantic and Pacific basins, which when combined with the inter-basin contrasts in oxidation kinetics suggests a muted influence of Atlantic ridges on the Southern Ocean biological carbon pump. Ultimately, we present a range of processes, operating at distinct scales, that must be better constrained to improve our understanding of how hydrothermalism affects the ocean cycling of iron and carbon.This article is part of the themed issue 'Biological and climatic impacts of ocean trace element chemistry'. © 2016 The Author(s).

  6. Molecular biogeochemical provinces in the Atlantic Surface Ocean

    Science.gov (United States)

    Koch, B. P.; Flerus, R.; Schmitt-Kopplin, P.; Lechtenfeld, O. J.; Bracher, A.; Cooper, W.; Frka, S.; Gašparović, B.; Gonsior, M.; Hertkorn, N.; Jaffe, R.; Jenkins, A.; Kuss, J.; Lara, R. J.; Lucio, M.; McCallister, S. L.; Neogi, S. B.; Pohl, C.; Roettgers, R.; Rohardt, G.; Schmitt, B. B.; Stuart, A.; Theis, A.; Ying, W.; Witt, M.; Xie, Z.; Yamashita, Y.; Zhang, L.; Zhu, Z. Y.; Kattner, G.

    2010-12-01

    One of the most important aspects to understand marine organic carbon fluxes is to resolve the molecular mechanisms which convert fresh, labile biomolecules into semi-labile and refractory dissolved and particulate organic compounds in the ocean. In this interdisciplinary project, which was performed on a cruise with RV Polarstern, we carried out a detailed molecular characterisation of dissolved organic matter (DOM) on a North-South transect in the Atlantic surface ocean in order to relate the data to different biological, climatic, oceanographic, and meteorological regimes as well as to terrestrial input from riverine and atmospheric sources. Our goal was to achieve a high resolution data set for the biogeochemical characterisation of the sources and reactivity of DOM. We applied ultrahigh resolution Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FT-ICR-MS), nutrient, trace element, amino acid, and lipid analyses and other biogeochemical measurements for 220 samples from the upper water column (0-200m) and eight deep profiles. Various spectroscopic techniques were applied continuously in a constant sample water flow supplied by a fish system and the moon pool. Radiocarbon dating enabled assessing DOC residence time. Bacterial abundance and production provided a metabolic context for the DOM characterization work and pCO2 concentrations. Combining molecular organic techniques and inductively coupled plasma mass spectrometry (ICP-MS) established an important link between organic and inorganic biogeochemical studies. Multivariate statistics, primarily based on FT-ICR-MS data for 220 samples, allowed identifying geographical clusters which matched ecological provinces proposed previously by Longhurst (2007). Our study demonstrated that marine DOM carries molecular information reflecting the “history” of ocean water masses. This information can be used to define molecular biogeochemical provinces and to improve our understanding of element fluxes in

  7. The Climate Science Special Report: Rising Seas and Changing Oceans

    Science.gov (United States)

    Kopp, R. E.

    2017-12-01

    GMSL has risen by about 16-21 cm since 1900. Ocean heat content has increased at all depths since the 1960s, and global mean sea-surface temperature increased 0.7°C/century between 1900 to 2016. Human activity contributed substantially to generating a rate of GMSL rise since 1900 faster than during any preceding century in at least 2800 years. A new set of six sea-level rise scenarios, spanning a range from 30 cm to 250 cm of 21st century GMSL rise, were developed for the CSSR. The lower scenario is based on linearly extrapolating the past two decades' rate of rise. The upper scenario is informed by literature estimates of maximum physically plausible values, observations indicating the onset of marine ice sheet instability in parts of West Antarctica, and modeling of ice-cliff and ice-shelf instability mechanisms. The new scenarios include localized projections along US coastlines. There is significant variability around the US, with rates of rise likely greater than GMSL rise in the US Northeast and the western Gulf of Mexico. Under scenarios involving extreme Antarctic contributions, regional rise would be greater than GMSL rise along almost all US coastlines. Historical sea-level rise has already driven a 5- to 10-fold increase in minor tidal flooding in several US coastal cities since the 1960s. Under the CSSR's Intermediate sea-level rise scenario (1.0 m of GMSL rise in 2100) , a majority of NOAA tide gauge locations will by 2040 experience the historical 5-year coastal flood about 5 times per year. Ocean changes are not limited to rising sea levels. Ocean pH is decreasing at a rate that may be unparalleled in the last 66 million years. Along coastlines, ocean acidification can be enhanced by changes in the upwelling (particularly along the US Pacific Coast); by episodic, climate change-enhanced increases in freshwater input (particularly along the US Atlantic Coast); and by the enhancement of biological respiration by nutrient runoff. Climate models project

  8. Upper respiratory tract (image)

    Science.gov (United States)

    The major passages and structures of the upper respiratory tract include the nose or nostrils, nasal cavity, mouth, throat (pharynx), and voice box (larynx). The respiratory system is lined with a mucous membrane that ...

  9. ACA Federal Upper Limits

    Data.gov (United States)

    U.S. Department of Health & Human Services — Affordable Care Act Federal Upper Limits (FUL) based on the weighted average of the most recently reported monthly average manufacturer price (AMP) for...

  10. Methyl bromide: ocean sources, ocean sinks, and climate sensitivity.

    Science.gov (United States)

    Anbar, A D; Yung, Y L; Chavez, F P

    1996-03-01

    The oceans play an important role in the geochemical cycle of methyl bromide (CH3Br), the major carrier of O3-destroying bromine to the stratosphere. The quantity of CH3Br produced annually in seawater is comparable to the amount entering the atmosphere each year from natural and anthropogenic sources. The production mechanism is unknown but may be biological. Most of this CH3Br is consumed in situ by hydrolysis or reaction with chloride. The size of the fraction which escapes to the atmosphere is poorly constrained; measurements in seawater and the atmosphere have been used to justify both a large oceanic CH3Br flux to the atmosphere and a small net ocean sink. Since the consumption reactions are extremely temperature-sensitive, small temperature variations have large effects on the CH3Br concentration in seawater, and therefore on the exchange between the atmosphere and the ocean. The net CH3Br flux is also sensitive to variations in the rate of CH3Br production. We have quantified these effects using a simple steady state mass balance model. When CH3Br production rates are linearly scaled with seawater chlorophyll content, this model reproduces the latitudinal variations in marine CH3Br concentrations observed in the east Pacific Ocean by Singh et al. [1983] and by Lobert et al. [1995]. The apparent correlation of CH3Br production with primary production explains the discrepancies between the two observational studies, strengthening recent suggestions that the open ocean is a small net sink for atmospheric CH3Br, rather than a large net source. The Southern Ocean is implicated as a possible large net source of CH3Br to the atmosphere. Since our model indicates that both the direction and magnitude of CH3Br exchange between the atmosphere and ocean are extremely sensitive to temperature and marine productivity, and since the rate of CH3Br production in the oceans is comparable to the rate at which this compound is introduced to the atmosphere, even small

  11. Arctic Freshwater Switchyard Project: Spring temperature and Salinity data collected by aircraft in the Arctic Ocean, May 2006 - May 2007 (NODC Accession 0057319)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A program to study freshwater circulation (sea ice + upper ocean) in the "freshwater switchyard" between Alert (Ellesmere Island) and the North Pole. The project...

  12. Upper gastrointestinal bleeding.

    Science.gov (United States)

    Feinman, Marcie; Haut, Elliott R

    2014-02-01

    Upper gastrointestinal (GI) bleeding remains a commonly encountered diagnosis for acute care surgeons. Initial stabilization and resuscitation of patients is imperative. Stable patients can have initiation of medical therapy and localization of the bleeding, whereas persistently unstable patients require emergent endoscopic or operative intervention. Minimally invasive techniques have surpassed surgery as the treatment of choice for most upper GI bleeding. Copyright © 2014 Elsevier Inc. All rights reserved.

  13. Dissolved inorganic carbon, pH, temperature, salinity and other variables collected from discrete sample and profile observations using CTD, bottle and other instruments from the SHIRASE in the Indian Ocean, South Pacific Ocean and Tasman Sea from 1992-12-03 to 1993-03-19 (NODC Accession 0113597)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0113597 includes biological, chemical, discrete sample, physical and profile data collected from SHIRASE in the Indian Ocean, South Pacific Ocean and...

  14. Biogeochemical studies of selenium in the Indian Ocean

    International Nuclear Information System (INIS)

    Hattori, H.; Nakaguchi, Y.; Hiraki, K.; Kimura, M.; Koike, Y.

    1999-01-01

    Selenium that is a one of trace essential elements exists mainly in the chemical form of Se(IV), Se(VI) and organic selenium in ocean. Moreover, the monitoring of the selenium species has become a matter of interest as a mean of estimating their influence in biological processes in ocean. In recent works, some investigators reported that Se(IV) shows nutrient-type especially like silica's behavior, Se(VI) shows an approximately constant value, and the biological activities control the distribution of organic selenium. However, these reports were not included the whole world's oceans. It is necessary to research several oceans for the explication of fate on selenium. We investigated at the most interesting area - the Eastern Indian Ocean where should play a key role in global ocean's cycle for acquiring the new knowledge of selenium species at first

  15. Investigating Undergraduate Science Students’ Conceptions and Misconceptions of Ocean Acidification

    Science.gov (United States)

    Danielson, Kathryn I.; Tanner, Kimberly D.

    2015-01-01

    Scientific research exploring ocean acidification has grown significantly in past decades. However, little science education research has investigated the extent to which undergraduate science students understand this topic. Of all undergraduate students, one might predict science students to be best able to understand ocean acidification. What conceptions and misconceptions of ocean acidification do these students hold? How does their awareness and knowledge compare across disciplines? Undergraduate biology, chemistry/biochemistry, and environmental studies students, and science faculty for comparison, were assessed on their awareness and understanding. Results revealed low awareness and understanding of ocean acidification among students compared with faculty. Compared with biology or chemistry/biochemistry students, more environmental studies students demonstrated awareness of ocean acidification and identified the key role of carbon dioxide. Novel misconceptions were also identified. These findings raise the question of whether undergraduate science students are prepared to navigate socioenvironmental issues such as ocean acidification. PMID:26163563

  16. The Ocean Literacy Campaign

    Science.gov (United States)

    Schoedinger, S. E.; Strang, C.

    2008-12-01

    "Ocean Literacy is an understanding of the ocean's influence on you and your influence on the ocean." This simple statement captures the spirit of a conceptual framework supporting ocean literacy (COSEE et al., 2005). The framework comprises 7 essential principles and 44 fundamental concepts an ocean literate person would know (COSEE et al., 2005). The framework is the result of an extensive grassroots effort to reach consensus on (1) a definition for ocean literacy and (2) an articulation of the most important concepts to be understood by ocean-literate citizen (Cava et al., 2005). In the process of reaching consensus on these "big ideas" about the ocean, what began as a series of workshops has emerged as a campaign "owned" by an ever-expanding community of individuals, organizations and networks involved in developing and promoting the framework. The Ocean Literacy Framework has provided a common language for scientists and educators working together and serves as key guidance for the ocean science education efforts. This presentation will focus on the impact this Ocean Literacy Campaign has had to date as well as efforts underway to provide additional tools to enable educators and educational policy makers to further integrate teaching and learning about the ocean and our coasts into formal K-12 education and informal education. COSEE, National Geographic Society, NOAA, College of Exploration (2005). Ocean Literacy: The Essential Principles of Ocean Sciences Grades K-12, a jointly published brochure, URL: http://www.coexploration.org/oceanliteracy/documents/OceanLitChart.pdf Cava, F., S. Schoedinger , C. Strang, and P. Tuddenham (2005). Science Content and Standards for Ocean Literacy: A Report on Ocean Literacy, URL: http://www.coexploration.org/oceanliteracy/documents/OLit2004-05_Final_Report.pdf.

  17. Upper GI Bleeding in Children

    Science.gov (United States)

    Upper GI Bleeding in Children What is upper GI Bleeding? Irritation and ulcers of the lining of the esophagus, stomach or duodenum can result in upper GI bleeding. When this occurs the child may vomit blood ...

  18. 75 FR 18778 - Safety Zone; Ocean City Air Show 2010, Atlantic Ocean, Ocean City, MD

    Science.gov (United States)

    2010-04-13

    ...-AA00 Safety Zone; Ocean City Air Show 2010, Atlantic Ocean, Ocean City, MD AGENCY: Coast Guard, DHS... zone on the Atlantic Ocean in the vicinity of Ocean City, Maryland to support the Ocean City Air Show. This action is intended to restrict vessel traffic movement on the Atlantic Ocean to protect mariners...

  19. Arctic Ocean Model Intercomparison Using Sound Speed

    Science.gov (United States)

    Dukhovskoy, D. S.; Johnson, M. A.

    2002-05-01

    The monthly and annual means from three Arctic ocean - sea ice climate model simulations are compared for the period 1979-1997. Sound speed is used to integrate model outputs of temperature and salinity along a section between Barrow and Franz Josef Land. A statistical approach is used to test for differences among the three models for two basic data subsets. We integrated and then analyzed an upper layer between 2 m - 50 m, and also a deep layer from 500 m to the bottom. The deep layer is characterized by low time-variability. No high-frequency signals appear in the deep layer having been filtered out in the upper layer. There is no seasonal signal in the deep layer and the monthly means insignificantly oscillate about the long-period mean. For the deep ocean the long-period mean can be considered quasi-constant, at least within the 19 year period of our analysis. Thus we assumed that the deep ocean would be the best choice for comparing the means of the model outputs. The upper (mixed) layer was chosen to contrast the deep layer dynamics. There are distinct seasonal and interannual signals in the sound speed time series in this layer. The mixed layer is a major link in the ocean - air interaction mechanism. Thus, different mean states of the upper layer in the models might cause different responses in other components of the Arctic climate system. The upper layer also strongly reflects any differences in atmosphere forcing. To compare data from the three models we have used a one-way t-test for the population mean, the Wilcoxon one-sample signed-rank test (when the requirement of normality of tested data is violated), and one-way ANOVA method and F-test to verify our hypothesis that the model outputs have the same mean sound speed. The different statistical approaches have shown that all models have different mean characteristics of the deep and upper layers of the Arctic Ocean.

  20. Modeling Europa's Ice-Ocean Interface

    Science.gov (United States)

    Elsenousy, A.; Vance, S.; Bills, B. G.

    2014-12-01

    This work focuses on modeling the ice-ocean interface on Jupiter's Moon (Europa); mainly from the standpoint of heat and salt transfer relationship with emphasis on the basal ice growth rate and its implications to Europa's tidal response. Modeling the heat and salt flux at Europa's ice/ocean interface is necessary to understand the dynamics of Europa's ocean and its interaction with the upper ice shell as well as the history of active turbulence at this area. To achieve this goal, we used McPhee et al., 2008 parameterizations on Earth's ice/ocean interface that was developed to meet Europa's ocean dynamics. We varied one parameter at a time to test its influence on both; "h" the basal ice growth rate and on "R" the double diffusion tendency strength. The double diffusion tendency "R" was calculated as the ratio between the interface heat exchange coefficient αh to the interface salt exchange coefficient αs. Our preliminary results showed a strong double diffusion tendency R ~200 at Europa's ice-ocean interface for plausible changes in the heat flux due to onset or elimination of a hydrothermal activity, suggesting supercooling and a strong tendency for forming frazil ice.

  1. Ocean Disposal Site Monitoring

    Science.gov (United States)

    EPA is responsible for managing all designated ocean disposal sites. Surveys are conducted to identify appropriate locations for ocean disposal sites and to monitor the impacts of regulated dumping at the disposal sites.

  2. People and Oceans.

    Science.gov (United States)

    NatureScope, 1988

    1988-01-01

    Discusses people's relationship with oceans, focusing on ocean pollution, use, and protective measures of the sea and its wildlife. Activities included are "Mythical Monsters"; "Globetrotters"; "Plastic in the Sea"; and "Sea of Many Uses." (RT)

  3. Ocean Sediment Thickness Contours

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Ocean sediment thickness contours in 200 meter intervals for water depths ranging from 0 - 18,000 meters. These contours were derived from a global sediment...

  4. Ocean Robotic Networks

    Energy Technology Data Exchange (ETDEWEB)

    Schofield, Oscar [Rutgers University

    2012-05-23

    We live on an ocean planet which is central to regulating the Earth’s climate and human society. Despite the importance of understanding the processes operating in the ocean, it remains chronically undersampled due to the harsh operating conditions. This is problematic given the limited long term information available about how the ocean is changing. The changes include rising sea level, declining sea ice, ocean acidification, and the decline of mega fauna. While the changes are daunting, oceanography is in the midst of a technical revolution with the expansion of numerical modeling techniques, combined with ocean robotics. Operating together, these systems represent a new generation of ocean observatories. I will review the evolution of these ocean observatories and provide a few case examples of the science that they enable, spanning from the waters offshore New Jersey to the remote waters of the Southern Ocean.

  5. Ethane ocean on Titan

    Science.gov (United States)

    Lunine, J. I.; Stevenson, D. J.; Yung, Y.L.

    1983-01-01

    Voyager I radio occultation data is employed to develop a qualitative model of an ethane ocean on Titan. It is suggested that the ocean contains 25 percent CH4 and that the ocean is in dynamic equilibrium with an N2 atmosphere. Previous models of a CH4 ocean are discounted due to photolysis rates of CH4 gas. Tidal damping of Titan's orbital eccentricity is taken as evidence for an ocean layer approximately 1 km deep, with the ocean floor being covered with a solid C2H2 layer 100 to 200 m thick. The photolytic process disrupting the CH4, if the estimates of the oceanic content of CH4 are correct, could continue for at least one billion years. Verification of the model is dependent on detecting CH4 clouds in the lower atmosphere, finding C2H6 saturation in the lower troposphere, or obtaining evidence of a global ocean.

  6. Regional Ocean Data Assimilation

    KAUST Repository

    Edwards, Christopher A.; Moore, Andrew M.; Hoteit, Ibrahim; Cornuelle, Bruce D.

    2015-01-01

    This article reviews the past 15 years of developments in regional ocean data assimilation. A variety of scientific, management, and safety-related objectives motivate marine scientists to characterize many ocean environments, including coastal

  7. Ocean Disposal Sites

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 1972, Congress enacted the Marine Protection, Research, and Sanctuaries Act (MPRSA, also known as the Ocean Dumping Act) to prohibit the dumping of material into...

  8. Ocean Station Vessel

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Ocean Station Vessels (OSV) or Weather Ships captured atmospheric conditions while being stationed continuously in a single location. While While most of the...

  9. California Ocean Uses Atlas

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset is a result of the California Ocean Uses Atlas Project: a collaboration between NOAA's National Marine Protected Areas Center and Marine Conservation...

  10. Ocean Acidification Product Suite

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Scientists within the ACCRETE (Acidification, Climate, and Coral Reef Ecosystems Team) Lab of AOML_s Ocean Chemistry and Ecosystems Division (OCED) have constructed...

  11. A pivotal role for ocean eddies in the distribution of microbial communities across the Antarctic Circumpolar Current.

    Directory of Open Access Journals (Sweden)

    Siddarthan Venkatachalam

    Full Text Available Mesoscale variability and associated eddy fluxes play crucial roles in ocean circulation dynamics and the ecology of the upper ocean. In doing so, these features are biologically important, providing a mechanism for the mixing and exchange of nutrients and biota within the ocean. Transient mesoscale eddies in the Southern Ocean are known to relocate zooplankton communities across the Antarctic Circumpolar Current (ACC and are important foraging grounds for marine top predators. In this study we investigated the role of cyclonic and anti-cyclonic eddies formed at the South-West Indian Ridge on the spatial variability and diversity of microbial communities. We focused on two contrasting adjacent eddies within the Antarctic Polar Frontal Zone to determine how these features may influence the microbial communities within this region. The water masses and microbiota of the two eddies, representative of a cyclonic cold core from the Antarctic zone and an anti-cyclonic warm-core from the Subantarctic zone, were compared. The data reveal that the two eddies entrain distinct microbial communities from their points of origin that are maintained for up to ten months. Our findings highlight the ecological impact that changes, brought by the translocation of eddies across the ACC, have on microbial diversity.

  12. Bacteria in the greenhouse: Modeling the role of oceanic plankton in the global carbon cycle

    International Nuclear Information System (INIS)

    Ducklow, H.W.; Fasham, M.J.R.

    1992-01-01

    To plan effectively to deal with the greenhouse effect, a fundamental understanding is needed of the biogeochemical and physical machinery that cycles carbon in the global system; in addition, models are needed of the carbon cycle to project the effects of increasing carbon dioxide. In this chapter, a description is given of efforts to simulate the cycling of carbon and nitrogen in the upper ocean, concentrating on the model's treatment of marine phytoplankton, and what it reveals of their role in the biogeochemical cycling of carbon between the ocean and atmosphere. The focus is on the upper ocean because oceanic uptake appears to regulate the level of carbon dioxide in the atmosphere

  13. The Coastal Ocean Prediction Systems program: Understanding and managing our coastal ocean

    International Nuclear Information System (INIS)

    Eden, H.F.; Mooers, C.N.K.

    1990-06-01

    The goal of COPS is to couple a program of regular observations to numerical models, through techniques of data assimilation, in order to provide a predictive capability for the US coastal ocean including the Great Lakes, estuaries, and the entire Exclusive Economic Zone (EEZ). The objectives of the program include: determining the predictability of the coastal ocean and the processes that govern the predictability; developing efficient prediction systems for the coastal ocean based on the assimilation of real-time observations into numerical models; and coupling the predictive systems for the physical behavior of the coastal ocean to predictive systems for biological, chemical, and geological processes to achieve an interdisciplinary capability. COPS will provide the basis for effective monitoring and prediction of coastal ocean conditions by optimizing the use of increased scientific understanding, improved observations, advanced computer models, and computer graphics to make the best possible estimates of sea level, currents, temperatures, salinities, and other properties of entire coastal regions

  14. Impacts of atmospheric anthropogenic nitrogen on the open ocean

    NARCIS (Netherlands)

    Duce, R.A.; LaRoche, J.; Altieri, K.; Arrigo, K.R.; Baker, A.R.; Capone, D.G.; Cornell, S.; Dentener, F.; Galloway, J.; Ganeshram, R.S.; Geider, R.J.; Jickells, T.; Kuypers, M.M.; Langlois, R.; Liss, P.S.; Liu, S.; Middelburg, J.J.; Moore, C.M.; Nickovic, S.; Oschlies, A.; Pedersen, T.; Prospero, J.; Schlitzer, R.; Seitzinger, S.; Sorensen, L.L.; Uematsu, M.; Ulloa, O.; Voss, M.; Ward, B.; Zamora, L.

    2008-01-01

    Increasing quantities of atmospheric anthropogenic fixed nitrogen entering the open ocean could account for up to about a third of the ocean's external (nonrecycled) nitrogen supply and up to 3% of the annual new marine biological production, 0.3 petagram of carbon per year. This input could account

  15. Evaluation of existing ecosystem models with regard to ocean acidification

    NARCIS (Netherlands)

    Van Engeland, T.; Soetaert, K.; Middelburg, J.J.; Schartau, M.; Hohn, S.; Oschlies, A.

    2011-01-01

    Although the carbonate chemistry and physical aspects of ocean acidification are well constrained, its biological effects are not fully understood. Experimental research has shown large variability in responses to increased atmospheric CO2 input into the ocean, ranging from positive to zero and

  16. The Indian Ocean nodule field: Geology and resource potential

    Digital Repository Service at National Institute of Oceanography (India)

    Mukhopadhyay, R.; Ghosh, A; Iyer, S.D.

    This book briefly accounts for the physiography, geology, biology, physics and chemistry of the nodule field, and discusses in detail the aspects of structure, tectonic and volcanism in the field. The role of the ocean floor sediment that hosts...

  17. Ocean biogeochemistry and atmospheric composition: Significance of the Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Naqvi, S.W.A.; Jayakumar, D.A.

    -deficiency at mid-depths in this region modulates oceanic combined nitrogen inventory and consequently biological productivity. Due to a delicate biogeochemical balance the Arabian Sea is expected to be among the first to react to potential anthropogenic...

  18. Marine geochemistry ocean circulation, carbon cycle and climate change

    CERN Document Server

    Roy-Barman, Matthieu

    2016-01-01

    Marine geochemistry uses chemical elements and their isotopes to study how the ocean works. It brings quantitative answers to questions such as: What is the deep ocean mixing rate? How much atmospheric CO2 is pumped by the ocean? How fast are pollutants removed from the ocean? How do ecosystems react to the anthropogenic pressure? The book provides a simple introduction to the concepts (environmental chemistry, isotopes), the methods (field approach, remote sensing, modeling) and the applications (ocean circulation, carbon cycle, climate change) of marine geochemistry with a particular emphasis on isotopic tracers. Marine geochemistry is not an isolated discipline: numerous openings on physical oceanography, marine biology, climatology, geology, pollutions and ecology are proposed and provide a global vision of the ocean. It includes new topics based on ongoing research programs such as GEOTRACES, Global Carbon Project, Tara Ocean. It provides a complete outline for a course in marine geochemistry. To favor a...

  19. Right upper quadrant pain

    International Nuclear Information System (INIS)

    Ralls, P.W.; Colletti, P.M.; Boswell, W.D. Jr.; Halls, J.M.

    1984-01-01

    Historically, assessment of acute right upper quadrant abdominal pain has been a considerable clinical challenge. While clinical findings and laboratory data frequently narrow the differential diagnosis, symptom overlap generally precludes definitive diagnosis among the various diseases causing acute right upper quadrant pain. Fortunately, the advent of newer diagnostic imaging modalities has greatly improved the rapidity and reliability of diagnosis in these patients. An additional challenge to the physician, with increased awareness of the importance of cost effectiveness in medicine, is to select appropriate diagnostic schema that rapidly establish accurate diagnoses in the most economical fashion possible. The dual goals of this discussion are to assess not only the accuracy of techniques used to evaluate patients with acute right upper quadrant pain, but also to seek out cost-effective, coordinated imaging techniques to achieve this goal

  20. Assessing ocean alkalinity for carbon sequestration

    Science.gov (United States)

    Renforth, Phil; Henderson, Gideon

    2017-09-01

    Over the coming century humanity may need to find reservoirs to store several trillions of tons of carbon dioxide (CO2) emitted from fossil fuel combustion, which would otherwise cause dangerous climate change if it were left in the atmosphere. Carbon storage in the ocean as bicarbonate ions (by increasing ocean alkalinity) has received very little attention. Yet recent work suggests sufficient capacity to sequester copious quantities of CO2. It may be possible to sequester hundreds of billions to trillions of tons of C without surpassing postindustrial average carbonate saturation states in the surface ocean. When globally distributed, the impact of elevated alkalinity is potentially small and may help ameliorate the effects of ocean acidification. However, the local impact around addition sites may be more acute but is specific to the mineral and technology. The alkalinity of the ocean increases naturally because of rock weathering in which >1.5 mol of carbon are removed from the atmosphere for every mole of magnesium or calcium dissolved from silicate minerals (e.g., wollastonite, olivine, and anorthite) and 0.5 mol for carbonate minerals (e.g., calcite and dolomite). These processes are responsible for naturally sequestering 0.5 billion tons of CO2 per year. Alkalinity is reduced in the ocean through carbonate mineral precipitation, which is almost exclusively formed from biological activity. Most of the previous work on the biological response to changes in carbonate chemistry have focused on acidifying conditions. More research is required to understand carbonate precipitation at elevated alkalinity to constrain the longevity of carbon storage. A range of technologies have been proposed to increase ocean alkalinity (accelerated weathering of limestone, enhanced weathering, electrochemical promoted weathering, and ocean liming), the cost of which may be comparable to alternative carbon sequestration proposals (e.g., $20-100 tCO2-1). There are still many

  1. The Oceanic Flux Program: A three decade time-series of particle flux in the deep Sargasso Sea

    Science.gov (United States)

    Weber, J. C.; Conte, M. H.

    2010-12-01

    The Oceanic Flux Program (OFP), 75 km SE of Bermuda, is the longest running time-series of its kind. Initiated in 1978, the OFP has produced an unsurpassed, nearly continuous record of temporal variability in deep ocean fluxes, with a >90% temporal coverage at 3200m depth. The OFP, in conjunction with the co-located Bermuda-Atlantic Time Series (BATS) and the Bermuda Testbed Mooring (BTM) time-series, has provided key observations enabling detailed assessment of how seasonal and non-seasonal variability in the deep ocean is linked with the overlying physical and biogeochemical environment. This talk will focus on the short-term flux variability that overlies the seasonal flux pattern in the Sargasso Sea, emphasizing episodic extreme flux events. Extreme flux events are responsible for much of the year-to-year variability in mean annual flux and are most often observed during early winter and late spring when surface stratification is weak or transient. In addition to biological phenomena (e.g. salp blooms), passage of productive meso-scale features such as eddies, which alter surface water mixing characteristics and surface export fluxes, may initiate some extreme flux events. Yet other productive eddies show a minimal influence on the deep flux, underscoring the importance of upper ocean ecosystem structure and midwater processes on the coupling between the surface ocean environment and deep fluxes. Using key organic and inorganic tracers, causative processes that influence deep flux generation and the strength of the coupling with the surface ocean environment can be identified.

  2. Upper ocean variability of the equatorial Indian Ocean and its relation to chlorophyll pigment concentration.

    Digital Repository Service at National Institute of Oceanography (India)

    Narvekar, J.; PrasannaKumar, S.

    a strong semi-annual signal with peak warming in April and cooling in July-August. Both mixed layer depth (MLD) and barrier layer thickness (BLT) showed a weak annual signal. The deep MLD during summer was due to the combined effect of strong winds...

  3. Computational Ocean Acoustics

    CERN Document Server

    Jensen, Finn B; Porter, Michael B; Schmidt, Henrik

    2011-01-01

    Since the mid-1970s, the computer has played an increasingly pivotal role in the field of ocean acoustics. Faster and less expensive than actual ocean experiments, and capable of accommodating the full complexity of the acoustic problem, numerical models are now standard research tools in ocean laboratories. The progress made in computational ocean acoustics over the last thirty years is summed up in this authoritative and innovatively illustrated new text. Written by some of the field's pioneers, all Fellows of the Acoustical Society of America, Computational Ocean Acoustics presents the latest numerical techniques for solving the wave equation in heterogeneous fluid–solid media. The authors discuss various computational schemes in detail, emphasizing the importance of theoretical foundations that lead directly to numerical implementations for real ocean environments. To further clarify the presentation, the fundamental propagation features of the techniques are illustrated in color. Computational Ocean A...

  4. Slow science: the value of long ocean biogeochemistry records.

    Science.gov (United States)

    Henson, Stephanie A

    2014-09-28

    Sustained observations (SOs) have provided invaluable information on the ocean's biology and biogeochemistry for over 50 years. They continue to play a vital role in elucidating the functioning of the marine ecosystem, particularly in the light of ongoing climate change. Repeated, consistent observations have provided the opportunity to resolve temporal and/or spatial variability in ocean biogeochemistry, which has driven exploration of the factors controlling biological parameters and processes. Here, I highlight some of the key breakthroughs in biological oceanography that have been enabled by SOs, which include areas such as trophic dynamics, understanding variability, improved biogeochemical models and the role of ocean biology in the global carbon cycle. In the near future, SOs are poised to make progress on several fronts, including detecting climate change effects on ocean biogeochemistry, high-resolution observations of physical-biological interactions and greater observational capability in both the mesopelagic zone and harsh environments, such as the Arctic. We are now entering a new era for biological SOs, one in which our motivations have evolved from the need to acquire basic understanding of the ocean's state and variability, to a need to understand ocean biogeochemistry in the context of increasing pressure in the form of climate change, overfishing and eutrophication.

  5. Particle fluxes in the deep Eastern Mediterranean basins: the role of ocean vertical velocities

    Directory of Open Access Journals (Sweden)

    L. Patara

    2009-03-01

    Full Text Available This paper analyzes the relationship between deep sedimentary fluxes and ocean current vertical velocities in an offshore area of the Ionian Sea, the deepest basin of the Eastern Mediterranean Sea. Sediment trap data are collected at 500 m and 2800 m depth in two successive moorings covering the period September 1999–May 2001. A tight coupling is observed between the upper and deep traps and the estimated particle sinking rates are more than 200 m day−1. The current vertical velocity field is computed from a 1/16°×1/16° Ocean General Circulation Model simulation and from the wind stress curl. Current vertical velocities are larger and more variable than Ekman vertical velocities, yet the general patterns are alike. Current vertical velocities are generally smaller than 1 m day−1: we therefore exclude a direct effect of downward velocities in determining high sedimentation rates. However we find that upward velocities in the subsurface layers of the water column are positively correlated with deep particle fluxes. We thus hypothesize that upwelling would produce an increase in upper ocean nutrient levels – thus stimulating primary production and grazing – a few weeks before an enhanced vertical flux is found in the sediment traps. High particle sedimentation rates may be attained by means of rapidly sinking fecal pellets produced by gelatinous macro-zooplankton. Other sedimentation mechanisms, such as dust deposition, are also considered in explaining large pulses of deep particle fluxes. The fast sinking rates estimated in this study might be an evidence of the efficiency of the biological pump in sequestering organic carbon from the surface layers of the deep Eastern Mediterranean basins.

  6. Modelling shelf-ocean exchange and its biogeochemical consequences in coastal upwelling systems

    DEFF Research Database (Denmark)

    Muchamad, Al Azhar

    margin bathymetry, and 3) what processes determine the observed variability of total organic carbon (TOC) content in shelf sediments underlying the upwelling system, with implications for the formation of petroleum source rocks. Here, a numerical ocean modeling approach is used in this thesis to explore...... processes and the development of anoxia/euxinia under the present day or past geological conditions. Thirdly and last, processes controlling distribution of total organic carbon (TOC) content in sediments across the continental margin is evaluated by application of the model to the Benguela upwelling system....... In the model, biological primary production and shelf bottom-water anoxia result in enhanced sedimentary TOC concentrations on the mid shelf and upper slope. The simulated TOCs implicate that bottom lateral transport only has a significant effect on increasing the deposition of the organic carbon on the mid...

  7. Upper airway evaluation

    International Nuclear Information System (INIS)

    Hoffman, E.A.; Gefter, W.B.; Schnall, M.; Nordberg, J.; Listerud, J.; Lenkinski, R.E.

    1988-01-01

    The authors are evaluating upper-airway sleep disorders with magnetic resonance (MR) imaging and x-ray cine computed tomography (CT). Fixed structural anatomy is visualized with multisection spin-echo MR imaging, the dynamic component with cine CT. Unique aspects of the study are described in this paper

  8. Thermal structure and flow patterns around Seychelles group of Islands (Indian Ocean) during austral autumn

    Digital Repository Service at National Institute of Oceanography (India)

    Vethamony, P.; RameshBabu, V.; RameshKumar, M.R.

    Properties of thermal structure in the upper 750 m around the Seychelles group of islands in the Indian Ocean, based on Expendable Bathythermograph (XBT) data collected in March 1984, are presented along with the inferred flow patterns...

  9. Thermal structure of the Western Indian Ocean during the southwest monsoon, 1983

    Digital Repository Service at National Institute of Oceanography (India)

    Sarma, Y.V.B.; Sarma, M.S.S.; Rao, L.V.G.

    The thermal structure and the variability of heat content of the upper 400 m of the Western Indian Ocean were examined using the expendable bathythermograph (XBT) data collected onboard RV Sagar Kanya during July-August, 1983. Vertical displacement...

  10. New perspectives in ocean acidification research: editor's introduction to the special feature on ocean acidification.

    Science.gov (United States)

    Munday, Philip L

    2017-09-01

    Ocean acidification, caused by the uptake of additional carbon dioxide (CO 2 ) from the atmosphere, will have far-reaching impacts on marine ecosystems (Gattuso & Hansson 2011 Ocean acidification Oxford University Press). The predicted changes in ocean chemistry will affect whole biological communities and will occur within the context of global warming and other anthropogenic stressors; yet much of the biological research conducted to date has tested the short-term responses of single species to ocean acidification conditions alone. While an important starting point, these studies may have limited predictive power because they do not account for possible interactive effects of multiple climate change drivers or for ecological interactions with other species. Furthermore, few studies have considered variation in responses among populations or the evolutionary potential within populations. Therefore, our knowledge about the potential for marine organisms to adapt to ocean acidification is extremely limited. In 2015, two of the pioneers in the field, Ulf Riebesell and Jean-Pierre Gattuso, noted that to move forward as a field of study, future research needed to address critical knowledge gaps in three major areas: (i) multiple environmental drivers, (ii) ecological interactions and (iii) acclimation and adaptation (Riebesell and Gattuso 2015 Nat. Clim. Change 5 , 12-14 (doi:10.1038/nclimate2456)). In May 2016, more than 350 researchers, students and stakeholders met at the 4th International Symposium on the Ocean in a High-CO 2 World in Hobart, Tasmania, to discuss the latest advances in understanding ocean acidification and its biological consequences. Many of the papers presented at the symposium reflected this shift in focus from short-term, single species and single stressor experiments towards multi-stressor and multispecies experiments that address knowledge gaps about the ecological impacts of ocean acidification on marine communities. The nine papers in this

  11. Interactions of the tropical oceans. Rev.ed.

    International Nuclear Information System (INIS)

    Latif, M.; Barnett, T.P.

    1994-01-01

    We have investigated the interactions of the tropical oceans on interannual time scales by conducting a series of uncoupled atmospheric and oceanic general circulation experiments and hybrid coupled model simulations. Our results illustrate the key role of the El Nino/Southern Oscillation (ENSO) phenomenon in generating interannual variability in all three tropical ocean basins. Sea surface temperature (SST) anomalies in the tropical Pacific force via a changed atmospheric circulation SST anomalies of the same sign in the Indian Ocean and SST anomalies of the opposite sign in the Atlantic. However, although air-sea interactions in the Indian and Atlantic Oceans are much weaker than those in the Pacific, they contribute significantly to the variability in these two regions. The role of these air-sea interactions is mainly that of an amplifyer by which the ENSO induced signals are enhanced in ocean and atmosphere. This process is particularly important in the tropical Atlantic region. We investigated also whether ENSO is part of a zonally propagating ''wave'' which travels around the globe with a time scale of several years. Consistent with observations, the upper ocean heat content in the various numerical simulations seems to propagate slowly around the globe. SST anomalies in the Pacific Ocean introduce a global atmospheric response which in turn forces variations in the other tropical oceans. Since the different oceans exhibit different response characteristics to low-frequency wind changes, the individual tropical ocean responses can add up coincidentally to look like a global wave, and that appears to be the situation. In particular, no evidence is found that the Indian Ocean can significantly affect the ENSO cycle in the Pacific. Finally, the potential for climate forecasts in the Indian and Atlantic Oceans appears to be enhanced if one includes, in a coupled way, remote influences from the Pacific. (orig.)

  12. Investigating the Indian Ocean Geoid Low

    Science.gov (United States)

    Ghosh, A.; Gollapalli, T.; Steinberger, B. M.

    2016-12-01

    The lowest geoid anomaly on Earth lies in the Indian Ocean just south of the Indian peninsula.Several theories have been proposed to explain this geoid low, most of which invoke past subduction. Some recent studies have alsoargued that high velocity anomalies in the lower mantle coupled with low velocity anomalies in the upper mantle are responsible for these negative geoidanomalies. However, there is no general consensus regarding the source of the Indian Ocean negative geoid. We investigate the source of this geoid low by using forward models of density driven mantle convection using CitcomS. We test various tomography models in our flow calculations with different radial and lateral viscosity variations. Many tomography modelsproduce a fairly high correlation to the global geoid, however none could match the precise location of the geoid low in the Indian Ocean. Amerged P-wave model of LLNL-G3DV3 in the Indian Ocean region and S40rts elsewhere yields a good fit to the geoid anomaly, both in pattern and magnitude.The source of this geoid low seems to stem from a low velocity anomaly stretching from a depth of 300 km up to 700 km in the northern Indian Ocean region.This velocity anomaly could potentially arise from material rising along the edge of the African LLSVP and moving towards the northeast, facilitated by the movementof the Indian plate in the same direction.

  13. Physicochemical and biological characterization of the Roble river, Upper Cauca, western Colombia Caracterización fisicoquímica y biológica del río Roble, Alto Cauca, occidente de Colombia

    Directory of Open Access Journals (Sweden)

    Carlos A. García-Alzate

    2010-06-01

    Full Text Available To determine dial and seasonal differences as well as productivity and the trophic status of the lower Roble river, a tributary of the Vieja and upper Cauca rivers of west Colombia, we sampled phytoplankton, zooplankton, fish and macroinvertebrates and recorded physicochemical variables (dissolved oxygen, percent oxygen saturation, pH, conductivity, relative humidity, environmental, water, maximum and minimum temperatures, width, depth, current velocity, substrate, CO2, COD, BOD, total calcium and magnesium hardness, total, dissolved and suspended solids, alkalinity, acidity, chlorine and turbidity during the wet and dry seasons. Most physicochemical variables such as relative humidity, dissolved oxygen and percent oxygen saturation showed low coefficients of variation, except for oxygen deficit. The Shannon-Wiener diversity index, equity and dominance had low values around 0.5. We recorded eight orders, 28 families and 58 genera of macroinvertebrates, three divisions, five orders and 45 genera of phytoplankton, two divisions and six genera of zooplankton and 19 species of fishes. This river has an allochthonous-heterotrophic trophic state and productivity is oligotrophic but with a tendency to eutrophication.Para determinar las diferencias diarias y estaciónales, así como la productividad y el estado trófico del río Roble, un afluente de la Vieja, alto Cauca al occidente de Colombia, tomamos muestras de fitoplancton, zooplancton, peces y macroinvertebrados y registramos variables físico-químicas (oxígeno disuelto, porcentaje de saturación de oxígeno, pH, conductividad, humedad relativa, temperaturas ambiente, del agua, máximas y mínimas, ancho, profundidad, velocidad de la corriente, sustrato, CO2, DQO, DBO5, dureza total, dureza calcica y durezas magnesicas, sólidos totales, disueltos y suspendidos, alcalinidad , acidez, cloruros y turbidez durante sequía y lluvias. La mayoría de las variables físico-químicas tales como la

  14. Ca, Sr, Mo and U isotopes evidence ocean acidification and deoxygenation during the Late Permian mass extinction

    Science.gov (United States)

    Silva-Tamayo, Juan Carlos; Payne, Jon; Wignall, Paul; Newton, Rob; Eisenhauer, Anton; Weyer, Stenfan; Neubert, Nadja; Lau, Kim; Maher, Kate; Paytan, Adina; Lehrmann, Dan; Altiner, Demir; Yu, Meiyi

    2014-05-01

    The most catastrophic extinction event in the history of animal life occurred at the end of the Permian Period, ca. 252 Mya. Ocean acidification and global oceanic euxinia have each been proposed as causes of this biotic crisis, but the magnitude and timing of change in global ocean chemistry remains poorly constrained. Here we use multiple isotope systems - Ca, Sr, Mo and U - measured from well dated Upper Permian- Lower Triassic sedimentary sections to better constrain the magnitude and timing of change in ocean chemistry and the effects of ocean acidification and de-oxygenation through this interval. All the investigated carbonate successions (Turkey, Italy and China) exhibit decreasing δ44/40Ca compositions, from ~-1.4‰ to -2.0‰ in the interval preceding the main extinction. These values remain low during most of the Griesbachian, to finally return to -1.4‰ in the middle Dienerian. The limestone succession from southern Turkey also displays a major decrease in the δ88/86Sr values from 0.45‰ to 0.3‰ before the extinction. These values remain low during the Griesbachian and finally increase to 0.55‰ by the middle Dienerian. The paired negative anomalies on the carbonate δ44/40Ca and δ88/86Sr suggest a decrease in the carbonate precipitation and thus an episode of ocean acidification coincident with the major biotic crisis. The Mo and U isotope records also exhibit significant rapid negative anomalies at the onset of the main extinction interval, suggesting rapid expansion of anoxic and euxinic marine bottom waters during the extinction interval. The rapidity of the isotope excursions in Mo and U suggests substantially reduced residence times of these elements in seawater relative to the modern, consistent with expectations for a time of widespread anoxia. The large C-isotope variability within Lower Triassic rocks, which is similar to that of the Lower-Middle Cambrian, may reflect biologically controlled perturbations of the oceanic carbon cycle

  15. Surface wind mixing in the Regional Ocean Modeling System (ROMS)

    Science.gov (United States)

    Robertson, Robin; Hartlipp, Paul

    2017-12-01

    Mixing at the ocean surface is key for atmosphere-ocean interactions and the distribution of heat, energy, and gases in the upper ocean. Winds are the primary force for surface mixing. To properly simulate upper ocean dynamics and the flux of these quantities within the upper ocean, models must reproduce mixing in the upper ocean. To evaluate the performance of the Regional Ocean Modeling System (ROMS) in replicating the surface mixing, the results of four different vertical mixing parameterizations were compared against observations, using the surface mixed layer depth, the temperature fields, and observed diffusivities for comparisons. The vertical mixing parameterizations investigated were Mellor- Yamada 2.5 level turbulent closure (MY), Large- McWilliams- Doney Kpp (LMD), Nakanishi- Niino (NN), and the generic length scale (GLS) schemes. This was done for one temperate site in deep water in the Eastern Pacific and three shallow water sites in the Baltic Sea. The model reproduced the surface mixed layer depth reasonably well for all sites; however, the temperature fields were reproduced well for the deep site, but not for the shallow Baltic Sea sites. In the Baltic Sea, the models overmixed the water column after a few days. Vertical temperature diffusivities were higher than those observed and did not show the temporal fluctuations present in the observations. The best performance was by NN and MY; however, MY became unstable in two of the shallow simulations with high winds. The performance of GLS nearly as good as NN and MY. LMD had the poorest performance as it generated temperature diffusivities that were too high and induced too much mixing. Further observational comparisons are needed to evaluate the effects of different stratification and wind conditions and the limitations on the vertical mixing parameterizations.

  16. Oceanic migration and spawning of anguillid eels.

    Science.gov (United States)

    Tsukamoto, K

    2009-06-01

    Many aspects of the life histories of anguillid eels have been revealed in recent decades, but the spawning migrations of their silver eels in the open ocean still remains poorly understood. This paper overviews what is known about the migration and spawning of anguillid species in the ocean. The factors that determine exactly when anguillid eels will begin their migrations are not known, although environmental influences such as lunar cycle, rainfall and river discharge seem to affect their patterns of movement as they migrate towards the ocean. Once in the ocean on their way to the spawning area, silver eels probably migrate in the upper few hundred metres, while reproductive maturation continues. Although involvement of a magnetic sense or olfactory cues seems probable, how they navigate or what routes they take are still a matter of speculation. There are few landmarks in the open ocean to define their spawning areas, other than oceanographic or geological features such as oceanic fronts or seamounts in some cases. Spawning of silver eels in the ocean has never been observed, but artificially matured eels of several species have exhibited similar spawning behaviours in the laboratory. Recent collections of mature adults and newly spawned preleptocephali in the spawning area of the Japanese eel Anguilla japonica have shown that spawning occurs during new moon periods in the North Equatorial Current region near the West Mariana Ridge. These data, however, show that the latitude of the spawning events can change among months and years depending on oceanographic conditions. Changes in spawning location of this and other anguillid species may affect their larval transport and survival, and appear to have the potential to influence recruitment success. A greater understanding of the spawning migration and the choice of spawning locations by silver eels is needed to help conserve declining anguillid species.

  17. The Southern Ocean Observing System

    OpenAIRE

    Rintoul, Stephen R.; Meredith, Michael P.; Schofield, Oscar; Newman, Louise

    2012-01-01

    The Southern Ocean includes the only latitude band where the ocean circles the earth unobstructed by continental boundaries. This accident of geography has profound consequences for global ocean circulation, biogeochemical cycles, and climate. The Southern Ocean connects the ocean basins and links the shallow and deep limbs of the overturning circulation (Rintoul et al., 2001). The ocean's capacity to moderate the pace of climate change is therefore influenced strongly by the Southern Ocean's...

  18. Upper urinary tract tumors

    DEFF Research Database (Denmark)

    Gandrup, Karen L; Nordling, Jørgen; Balslev, Ingegerd

    2014-01-01

    BACKGROUND: Computed tomography urography (CTU) is used widely in the work-up of patients with symptoms of urinary tract lesions. Preoperative knowledge of whether a tumor is invasive or non-invasive is important for the choice of surgery. So far there are no studies about the distinction...... of invasive and non-invasive tumors in ureter and renal pelvis based on the enhancement measured with Hounsfield Units. PURPOSE: To examine the value of CTU using split-bolus technique to distinguish non-invasive from invasive urothelial carcinomas in the upper urinary tract. MATERIAL AND METHODS: Patients...... obtained at CTU could distinguish between invasive and non-invasive lesions. No patients had a CTU within the last year before the examination that resulted in surgery. CONCLUSION: A split-bolus CTU cannot distinguish between invasive and non-invasive urothelial tumors in the upper urinary tract...

  19. AFSC/RACE/SAP/Long: Data from: Upper thermal tolerance in red and blue king crab: Sublethal and lethal effects

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset contains data from a series of experiments that determined the upper thermal tolerance of early benthic stage red and blue king crabs. Experiments...

  20. Acropora Spatial Survey Data of the Upper Florida Keys National Marine Sanctuary 2005 -2007 (NODC Accession 0046934)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Presence or absence of acroporid corals marked by handheld GPS during snorkel or tow surveys of shallow water (5m) reef habitats in the Upper Florida Keys National...

  1. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: ESIL (ESI Shoreline Types - Lines)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The ESIL data set contains lines representing the shoreline and coastal habitats of the Upper Coast of Texas, classified according to the Environmental Sensitivity...

  2. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: BENTHIC (Benthic habitat polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains known locations of patchy and continuous seagrass and oyster reef habitat for the Upper Coast of Texas benthic habitat data. This data set...

  3. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: ESIP (ESI Shoreline Types - Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The ESIP data set contains polygons representing the shoreline and coastal habitats of the Upper Coast of Texas, classified according to the Environmental...

  4. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: HYDRO (Hydrography Lines and Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains vector lines and polygons representing coastal hydrography used in the creation of the Environmental Sensitivity Index (ESI) for the Upper...

  5. Acropora Spatial Survey Data of the Upper Florida Keys National Marine Sanctuary, 2005 - 2007 (NODC Accession 0046934)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data were collected by the NOAA Southeast Fisheries Science Center to document the presence or absence of Acropora spp at shallow reef sites in the Upper...

  6. CRCP-Water temperature data from loggers deployed at various reef sites off the upper Florida Keys

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Temperature loggers were deployed at various monitoring sites off the upper Florida Keys where other ecological studies were underway, most focused on aspects of...

  7. Satellite based Ocean Forecasting, the SOFT project

    Science.gov (United States)

    Stemmann, L.; Tintoré, J.; Moneris, S.

    2003-04-01

    The knowledge of future oceanic conditions would have enormous impact on human marine related areas. For such reasons, a number of international efforts are being carried out to obtain reliable and manageable ocean forecasting systems. Among the possible techniques that can be used to estimate the near future states of the ocean, an ocean forecasting system based on satellite imagery is developped through the Satelitte based Ocean ForecasTing project (SOFT). SOFT, established by the European Commission, considers the development of a forecasting system of the ocean space-time variability based on satellite data by using Artificial Intelligence techniques. This system will be merged with numerical simulation approaches, via assimilation techniques, to get a hybrid SOFT-numerical forecasting system of improved performance. The results of the project will provide efficient forecasting of sea-surface temperature structures, currents, dynamic height, and biological activity associated to chlorophyll fields. All these quantities could give valuable information on the planning and management of human activities in marine environments such as navigation, fisheries, pollution control, or coastal management. A detailed identification of present or new needs and potential end-users concerned by such an operational tool is being performed. The project would study solutions adapted to these specific needs.

  8. Ejecta from Ocean Impacts

    Science.gov (United States)

    Kyte, Frank T.

    2003-01-01

    Numerical simulations of deep-ocean impact provide some limits on the size of a projectile that will not mix with the ocean floor during a deep-ocean impact. For a vertical impact at asteroidal velocities (approx. 20 km/s), mixing is only likely when the projectile diameter is greater than 112 of the water depth. For oblique impacts, even larger projectiles will not mix with ocean floor silicates. Given the typical water depths of 4 to 5 km in deep-ocean basins, asteroidal projectiles with diameters as large as 2 or 3 km may commonly produce silicate ejecta that is composed only of meteoritic materials and seawater salts. However, the compressed water column beneath the projectile can still disrupt and shock metamorphose the ocean floor. Therefore, production of a separate, terrestrial ejecta component is not ruled out in the most extreme case. With increasing projectile size (or energy) relative to water depths, there must be a gradation between oceanic impacts and more conventional continental impacts. Given that 60% of the Earth's surface is covered by oceanic lithosphere and 500 m projectiles impact the Earth on 10(exp 5) y timescales, there must be hundreds of oceanic impact deposits in the sediment record awaiting discovery.

  9. Development of QC Procedures for Ocean Data Obtained by National Research Projects of Korea

    Science.gov (United States)

    Kim, S. D.; Park, H. M.

    2017-12-01

    To establish data management system for ocean data obtained by national research projects of Ministry of Oceans and Fisheries of Korea, KIOST conducted standardization and development of QC procedures. After reviewing and analyzing the existing international and domestic ocean-data standards and QC procedures, the draft version of standards and QC procedures were prepared. The proposed standards and QC procedures were reviewed and revised by experts in the field of oceanography and academic societies several times. A technical report on the standards of 25 data items and 12 QC procedures for physical, chemical, biological and geological data items. The QC procedure for temperature and salinity data was set up by referring the manuals published by GTSPP, ARGO and IOOS QARTOD. It consists of 16 QC tests applicable for vertical profile data and time series data obtained in real-time mode and delay mode. Three regional range tests to inspect annual, seasonal and monthly variations were included in the procedure. Three programs were developed to calculate and provide upper limit and lower limit of temperature and salinity at depth from 0 to 1550m. TS data of World Ocean Database, ARGO, GTSPP and in-house data of KIOST were analysed statistically to calculate regional limit of Northwest Pacific area. Based on statistical analysis, the programs calculate regional ranges using mean and standard deviation at 3 kind of grid systems (3° grid, 1° grid and 0.5° grid) and provide recommendation. The QC procedures for 12 data items were set up during 1st phase of national program for data management (2012-2015) and are being applied to national research projects practically at 2nd phase (2016-2019). The QC procedures will be revised by reviewing the result of QC application when the 2nd phase of data management programs is completed.

  10. Quantifying export production in the Southern Ocean: Implications for the Baxs proxy

    Science.gov (United States)

    Hernandez-Sanchez, Maria T.; Mills, Rachel A.; Planquette, HéLèNe; Pancost, Richard D.; Hepburn, Laura; Salter, Ian; Fitzgeorge-Balfour, Tania

    2011-12-01

    The water column and sedimentary Baxs distribution around the Crozet Plateau is used to decipher the controls and timing of barite formation and to evaluate how export production signals are recorded in sediments underlying a region of natural Fe fertilization within the Fe limited Southern Ocean. Export production estimated from preserved, vertical sedimentary Baxs accumulation rates are compared with published export fluxes assessed from an integrated study of the biological carbon pump to determine the validity of Baxs as a quantitative proxy under different Fe supply conditions typical of the Southern Ocean. Detailed assessment of the geochemical partitioning of Ba in sediments and the lithogenic end-member allows appropriate correction of the bulk Ba content and determination of the Baxs content of sediments and suspended particles. The upper water column distribution of Baxs is extremely heterogeneous spatially and temporally. Organic carbon/Baxs ratios in deep traps from the Fe fertilized region are similar to other oceanic settings allowing quantification of the inferred carbon export based on established algorithms. There appears to be some decoupling of POC and Ba export in the Fe limited region south of the Plateau. The export production across the Crozet Plateau inferred from the Baxs sedimentary proxy indicates that the Fe fertilized area to the north of the Plateau experiences enhanced export relative to equivalent Southern Ocean settings throughout the Holocene and that this influence may also have impacted the site to the south for significant periods. This interpretation is corroborated by alternative productivity proxies (opal accumulation, 231Paxs/230Thxs). Baxs can be used to quantify export production in complex settings such as naturally Fe-fertilized (volcanoclastic) areas, providing appropriate lithogenic correction is undertaken, and sediment focusing is corrected for along with evaluation of barite preservation.

  11. Our Changing Oceans: All about Ocean Acidification

    International Nuclear Information System (INIS)

    Rickwood, Peter

    2013-01-01

    The consequences of ocean acidification are global in scale. More research into ocean acidification and its consequences is needed. It is already known, for example, that there are regional differences in the vulnerability of fisheries to acidification. The combination of other factors, such as global warming, the destruction of habitats, overfishing and pollution, need to be taken into account when developing strategies to increase the marine environment’s resilience. Among steps that can be taken to reduce the impact is better protection of marine coastal ecosystems, such as mangrove swamps and seagrass meadows, which will help protect fisheries. This recommendation was one of the conclusions of a three-day workshop attended by economists and scientists and organized by the IAEA and the Centre Scientifique de Monaco in November 2012. In their recommendations the workshop also stressed that the impact of increasing ocean acidity must be taken into account in the management of fisheries, particularly where seafood is a main dietary source

  12. Biological Agents

    Science.gov (United States)

    ... E-Tools Safety and Health Topics / Biological Agents Biological Agents This page requires that javascript be enabled ... 202) 693-2300 if additional assistance is required. Biological Agents Menu Overview In Focus: Ebola Frederick A. ...

  13. The influence of the ocean circulation state on ocean carbon storage and CO2 drawdown potential in an Earth system model

    Science.gov (United States)

    Ödalen, Malin; Nycander, Jonas; Oliver, Kevin I. C.; Brodeau, Laurent; Ridgwell, Andy

    2018-03-01

    During the four most recent glacial cycles, atmospheric CO2 during glacial maxima has been lowered by about 90-100 ppm with respect to interglacials. There is widespread consensus that most of this carbon was partitioned in the ocean. It is, however, still debated which processes were dominant in achieving this increased carbon storage. In this paper, we use an Earth system model of intermediate complexity to explore the sensitivity of ocean carbon storage to ocean circulation state. We carry out a set of simulations in which we run the model to pre-industrial equilibrium, but in which we achieve different states of ocean circulation by changing forcing parameters such as wind stress, ocean diffusivity and atmospheric heat diffusivity. As a consequence, the ensemble members also have different ocean carbon reservoirs, global ocean average temperatures, biological pump efficiencies and conditions for air-sea CO2 disequilibrium. We analyse changes in total ocean carbon storage and separate it into contributions by the solubility pump, the biological pump and the CO2 disequilibrium component. We also relate these contributions to differences in the strength of the ocean overturning circulation. Depending on which ocean forcing parameter is tuned, the origin of the change in carbon storage is different. When wind stress or ocean diapycnal diffusivity is changed, the response of the biological pump gives the most important effect on ocean carbon storage, whereas when atmospheric heat diffusivity or ocean isopycnal diffusivity is changed, the solubility pump and the disequilibrium component are also important and sometimes dominant. Despite this complexity, we obtain a negative linear relationship between total ocean carbon and the combined strength of the northern and southern overturning cells. This relationship is robust to different reservoirs dominating the response to different forcing mechanisms. Finally, we conduct a drawdown experiment in which we investigate

  14. The influence of the ocean circulation state on ocean carbon storage and CO2 drawdown potential in an Earth system model

    Directory of Open Access Journals (Sweden)

    M. Ödalen

    2018-03-01

    Full Text Available During the four most recent glacial cycles, atmospheric CO2 during glacial maxima has been lowered by about 90–100 ppm with respect to interglacials. There is widespread consensus that most of this carbon was partitioned in the ocean. It is, however, still debated which processes were dominant in achieving this increased carbon storage. In this paper, we use an Earth system model of intermediate complexity to explore the sensitivity of ocean carbon storage to ocean circulation state. We carry out a set of simulations in which we run the model to pre-industrial equilibrium, but in which we achieve different states of ocean circulation by changing forcing parameters such as wind stress, ocean diffusivity and atmospheric heat diffusivity. As a consequence, the ensemble members also have different ocean carbon reservoirs, global ocean average temperatures, biological pump efficiencies and conditions for air–sea CO2 disequilibrium. We analyse changes in total ocean carbon storage and separate it into contributions by the solubility pump, the biological pump and the CO2 disequilibrium component. We also relate these contributions to differences in the strength of the ocean overturning circulation. Depending on which ocean forcing parameter is tuned, the origin of the change in carbon storage is different. When wind stress or ocean diapycnal diffusivity is changed, the response of the biological pump gives the most important effect on ocean carbon storage, whereas when atmospheric heat diffusivity or ocean isopycnal diffusivity is changed, the solubility pump and the disequilibrium component are also important and sometimes dominant. Despite this complexity, we obtain a negative linear relationship between total ocean carbon and the combined strength of the northern and southern overturning cells. This relationship is robust to different reservoirs dominating the response to different forcing mechanisms. Finally, we conduct a drawdown experiment

  15. Blue ocean strategy.

    Science.gov (United States)

    Kim, W Chan; Mauborgne, Renée

    2004-10-01

    Despite a long-term decline in the circus industry, Cirque du Soleil profitably increased revenue 22-fold over the last ten years by reinventing the circus. Rather than competing within the confines of the existing industry or trying to steal customers from rivals, Cirque developed uncontested market space that made the competition irrelevant. Cirque created what the authors call a blue ocean, a previously unknown market space. In blue oceans, demand is created rather than fought over. There is ample opportunity for growth that is both profitable and rapid. In red oceans--that is, in all the industries already existing--companies compete by grabbing for a greater share of limited demand. As the market space gets more crowded, prospects for profits and growth decline. Products turn into commodities, and increasing competition turns the water bloody. There are two ways to create blue oceans. One is to launch completely new industries, as eBay did with online auctions. But it's much more common for a blue ocean to be created from within a red ocean when a company expands the boundaries of an existing industry. In studying more than 150 blue ocean creations in over 30 industries, the authors observed that the traditional units of strategic analysis--company and industry--are of limited use in explaining how and why blue oceans are created. The most appropriate unit of analysis is the strategic move, the set of managerial actions and decisions involved in making a major market-creating business offering. Creating blue oceans builds brands. So powerful is blue ocean strategy, in fact, that a blue ocean strategic move can create brand equity that lasts for decades.

  16. The monsoon currents in the north Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Shankar, D.; Vinayachandran, P.N.; Unnikrishnan, A.S.

    . Journal of Geo- physical Research 97, 20169?20178. Pond, S., Pickard, G. L., 1983. Introductory dynamical oceanography, 2nd Edition. Pergamon Press, Oxford. Potemra, J. T., Luther, M. E., O'Brien, J. J., 1991. The seasonal circulation of the upper ocean...

  17. Decadal variation of ocean heat content and tropical cyclone activity ...

    Indian Academy of Sciences (India)

    The upper ocean heat content up to 700 m depth (OHC700) is an important ... made to examine the inter-decadal variations of tropical cyclone (TC) activity and OHC700 over the ..... In: Climate change 2007: The physical science basis (eds).

  18. Spiraling pathways of global deep waters to the surface of the Southern Ocean

    OpenAIRE

    Tamsitt, Veronica; Drake, Henri F.; Morrison, Adele K.; Talley, Lynne D.; Dufour, Carolina O.; Gray, Alison R.; Griffies, Stephen M.; Mazloff, Matthew R.; Sarmiento, Jorge L.; Wang, Jinbo; Weijer, Wilbert

    2017-01-01

    Upwelling of global deep waters to the sea surface in the Southern Ocean closes the global overturning circulation and is fundamentally important for oceanic uptake of carbon and heat, nutrient resupply for sustaining oceanic biological production, and the melt rate of ice shelves. However, the exact pathways and role of topography in Southern Ocean upwelling remain largely unknown. Here we show detailed upwelling pathways in three dimensions, using hydrographic observations and particle trac...

  19. Monitoring and assessment of ocean acidification in the Arctic Ocean-A scoping paper

    Science.gov (United States)

    Robbins, Lisa L.; Yates, Kimberly K.; Feely, Richard; Fabry, Victoria

    2010-01-01

    Carbon dioxide (CO2) in the atmosphere is absorbed at the ocean surface by reacting with seawater to form a weak, naturally occurring acid called carbonic acid. As atmospheric carbon dioxide increases, the concentration of carbonic acid in seawater also increases, causing a decrease in ocean pH and carbonate mineral saturation states, a process known as ocean acidification. The oceans have absorbed approximately 525 billion tons of carbon dioxide from the atmosphere, or about one-quarter to one-third of the anthropogenic carbon emissions released since the beginning of the Industrial Revolution. Global surveys of ocean chemistry have revealed that seawater pH has decreased by about 0.1 units (from a pH of 8.2 to 8.1) since the 1700s due to absorption of carbon dioxide (Raven and others, 2005). Modeling studies, based on Intergovernmental Panel on Climate Change (IPCC) CO2 emission scenarios, predict that atmospheric carbon dioxide levels could reach more than 500 parts per million (ppm) by the middle of this century and 800 ppm by the year 2100, causing an additional decrease in surface water pH of 0.3 pH units. Ocean acidification is a global threat and is already having profound and deleterious effects on the geology, biology, chemistry, and socioeconomic resources of coastal and marine habitats. The polar and sub-polar seas have been identified as the bellwethers for global ocean acidification.

  20. Blue Ocean Thinking

    Science.gov (United States)

    Orem, Donna

    2016-01-01

    This article describes a concept called the "blue ocean thinking strategy," developed by W. Chan Kim and Renée Mauborgne, professors at INSEAD, an international graduate school of business in France. The "blue ocean" thinking strategy considers opportunities to create new markets for services, rather than focusing solely on…