Role of mTOR, Bad, and Survivin in RasGAP Fragment N-Mediated Cell Protection

Science.gov (United States)

Yang, Jiang-Yan; Widmann, Christian

2013-01-01

Partial cleavage of p120 RasGAP by caspase-3 in stressed cells generates an N-terminal fragment, called fragment N, which activates an anti-apoptotic Akt-dependent survival response. Akt regulates several effectors but which of these mediate fragment N-dependent cell protection has not been defined yet. Here we have investigated the role of mTORC1, Bad, and survivin in the capacity of fragment N to protect cells from apoptosis. Neither rapamycin, an inhibitor of mTORC1, nor silencing of raptor, a subunit of the mTORC1 complex, altered the ability of fragment N from inhibiting cisplatin- and Fas ligand-induced death. Cells lacking Bad, despite displaying a stronger resistance to apoptosis, were still protected by fragment N against cisplatin-induced death. Fragment N was also able to protect cells from Fas ligand-induced death in conditions where Bad plays no role in apoptosis regulation. Fragment N expression in cells did neither modulate survivin mRNA nor its protein expression. Moreover, the expression of cytoplasmic survivin, known to exert anti-apoptotic actions in cells, still occurred in UV-B-irradiated epidermis of mouse expressing a caspase-3-resistant RasGAP mutant that cannot produce fragment N. Additionally, survivin function in cell cycle progression was not affected by fragment N. These results indicate that, taken individually, mTOR, Bad, or Survivin are not required for fragment N to protect cells from cell death. We conclude that downstream targets of Akt other than mTORC1, Bad, or survivin mediate fragment N-induced protection or that several Akt effectors can compensate for each other to induce the pro-survival fragment N-dependent response. PMID:23826368

Competence development in UAS

DEFF Research Database (Denmark)

Thorslund, Jørgen; Brodersen, Anne Mygind

As a University of Applied Science (UAS) University College Lillebaelt in Denmark is addressing education, knowledge production and professional development in perspective of life-long and life-wide learning. It is our basic assumption that that internal competence development ? individually...... and organizationally - among UAS educators should be based on same learning concepts as used in professional development to avoid parallelism. Do for yourself, what you preach for others. Second, competence development of faculty is a central element in transformation of our institutions from schools of higher...... education to universities of applied science (UAS). Competence development strategies should thus include objectives for the institutions ability to contribute to knowledge production....

Tumor containing fragment number influences immunohistochemistry positive rate of HER2 in biopsy specimens of gastric cancer.

Science.gov (United States)

Xu, Chen; Liu, Yalan; Ge, Xiaowen; Jiang, Dongxian; Zhang, Ying; Ji, Yuan; Hou, Jun; Huang, Jie; Su, Jieakesu; Zeng, Haiying; Qin, Jing; Hou, Yingyong

2017-05-26

HER2 assessment in biopsy specimens of gastric cancer (GC) is challenging because of the intratumoral heterogeneity. False negative results may be get because of limited biopsy material. The aim of this study is to explore how tumor-containing fragment number and biopsy specimen number affect HER2 immunohistochemistry (IHC) positive rate. Eight hundred and ninety biopsy specimens and 459 paired resected specimens were collected. IHC staining of HER2 was performed. HER2 IHC positive (scored 3+) rate was compared based on tumor-containing fragment number, biopsy specimen number, average size and tumor tissue proportion of tumor-containing fragments. The positive predictability of biopsy specimens to resected specimens was analyzed based on tumor fragment number. HER2 IHC positive rates were 2.0, 3.5, 7.0, 13.2, 17.1, and 15.9% when tumor fragment numbers were 1, 2, 3, 4, 5 and 6 respectively. The rate rose with the increase of tumor fragment number (P = 0.004). ROC curve analysis showed that biopsy specimens exhibited positive predictability when tumor fragment number reached 3, but showed better performance when the number was ≥4 (P fragment number reached 4, no statistic differences were reached in either HER2 IHC positive rate or positive predictability with further increase of the number (P > 0.05). HER2 IHC positive rate was not associated with biopsy number (P = 0.127), average size of tumor fragments (P = 0.397), and tumor tissue proportion of tumor fragments (P = 0.825) directly. The number of tumor-containing fragments influences HER2 IHC positive (scored 3+) rate. Greater than or equal to 4 (≥4) tumor fragments give better results in the positive rate as well as positive predictability. We recommend the number of tumor containing fragments be described in the HER2 IHC pathology reports for clinical reference in endoscopic biopsy specimens of GC.

UAS Developments Supporting Wildfire Observations

Science.gov (United States)

Ambrosia, V. G.; Dahlgren, R. P.; Watts, A.; Reynolds, K. W.; Ball, T.

2014-12-01

Wildfires are regularly occurring emergency events that threaten life, property, and natural resources in every U.S. State and many countries around the world. Despite projections that $1.8 billion will be spent by U.S. Federal agencies alone on wildfires in 2014, the decades-long trend of increasing fire size, severity, and cost is expected to continue. Furthermore, the enormous potential for UAS (and concomitant sensor systems) to serve as geospatial intelligence tools to improve the safety and effectiveness of fire management, and our ability to forecast fire and smoke movements, remains barely tapped. Although orbital sensor assets are can provide the geospatial extent of wildfires, generally those resources are limited in use due to their spatial and temporal resolution limitations. These two critical elements make orbital assets of limited utility for tactical, real-time wildfire management, or for continuous scientific analysis of the temporal dynamics related to fire energy release rates and plume concentrations that vary significantly thru a fire's progression. Large UAS platforms and sensors can and have been used to monitor wildfire events at improved temporal, spatial and radiometric scales, but more focus is being placed on the use of small UAS (sUAS) and sensors to support wildfire observation strategies. The use of sUAS is therefore more critical for TACTICAL management purposes, rather than strategic observations, where small-scale fire developments are critical to understand. This paper will highlight the historical development and use of UAS for fire observations, as well as the current shift in focus to smaller, more affordable UAS for more rapid integration into operational use on wildfire events to support tactical observation strategies, and support wildfire science measurement inprovements.

Family reunion for the UA2 calorimeter

CERN Multimedia

Abha Eli Phoboo

2015-01-01

After many years in CERN’s Microcosm exhibition, the last surviving UA2 central calorimeter module has been moved to Hall 175, the technical development laboratory of the ATLAS Tile Hadronic Calorimeter (Tilecal). The UA2 and ATLAS calorimeters are cousins, as both were designed by Otto Gildemeister. Now side by side, the calorimeters illustrate the progress made in sampling organic scintillator calorimeters over the past 35 years.   The ATLAS Tile Calorimeter prototypes (left) and the UA2 central calorimeter (right) in Hall 175. (Image: Mario Campanelli/ATLAS.) From 1981 to 1990, the UA2 experiment was one of the two detectors on CERN’s flagship accelerator, the SPS. At the heart of the UA2 detector was the central calorimeter. It was made up of 24 slices – each weighing four tonnes – arranged like orange segments around the collision point. These calorimeter slices played a central role in the research carried out by UA2 for the discovery of W bosons...

Ezrin dephosphorylation/downregulation contributes to ursolic acid-mediated cell death in human leukemia cells

International Nuclear Information System (INIS)

Li, G; Zhou, T; Liu, L; Chen, J; Zhao, Z; Peng, Y; Li, P; Gao, N

2013-01-01

Ezrin links the actin filaments with the cell membrane and has a functional role in the apoptotic process. It appears clear that ezrin is directly associated with Fas, leading to activation of caspase cascade and cell death. However, the exact role of ezrin in ursolic acid (UA)-induced apoptosis remains unclear. In this study, we show for the first time that UA induces apoptosis in both transformed and primary leukemia cells through dephosphorylation/downregulation of ezrin, association and polarized colocalization of Fas and ezrin, as well as formation of death-inducing signaling complex. These events are dependent on Rho-ROCK1 signaling pathway. Knockdown of ezrin enhanced cell death mediated by UA, whereas overexpression of ezrin attenuated UA-induced apoptosis. Our in vivo study also showed that UA-mediated inhibition of tumor growth of mouse leukemia xenograft model is in association with the dephosphorylation/downregulation of ezrin. Such findings suggest that the cytoskeletal protein ezrin may represent an attractive target for UA-mediated lethality in human leukemia cells

New results from the UA5/2-experiment

International Nuclear Information System (INIS)

Geich-Gimbel, C.

1985-01-01

This paper covers recent and unpublished results from the investigation of pp-bar-interactions at √s = 200 and 900 GeV with a streamer chamber detector (UA5/2-experiment) at the CERN SPS Collider. The author concentrates on cross section measurements and searches for unusual phenomena. The data these preliminary results are based upon were taken during a very successful run of the pulsed pp-bar-Collider at CERN in spring 1985. The UA5/2 detector took 115,000 streamer chamber pictures and 500,000 electronic events (i.e. only containing information from the trigger hodoscopes and the hadron calorimeter), mainly at the flat bottom at 100 GeV beam energy and the four seconds flat top at 450 GeV of the cycle. For part of the run, an additional photon converter plate was introduced between the beam pipe and the upper streamer chamber to increase the photon detection efficiency at large production angles. The UA5/2-detector consists of two large streamer chambers (6 x 1.25 x 0.5 m/sup 3/ visible volume), placed above and below the 2 mm thick beryllium beam pipe. The azimuthal coverage of the chambers is 95% for a pseudorapidity absolute value of n ≤, 3

POSSIBILITIES OF UAS FOR MARITIME MONITORING

Directory of Open Access Journals (Sweden)

A. Klimkowska

2016-06-01

Full Text Available In the last few years, Unmanned Aircraft Systems (UAS have become more important and its use for different application is appreciated. At the beginning UAS were used for military purposes. These successful applications initiated interest among researchers to find uses of UAS for civilian purposes, as they are alternative to both manned and satellite systems in acquiring high-resolution remote sensing data at lower cost while long flight duration. As UAS are built from many components such as unmanned aerial vehicle (UAV, sensing payloads, communication systems, ground control stations, recovery and launch equipment, and supporting equipment, knowledge about its functionality and characteristics is crucial for missions. Therefore, finding appropriate configuration of all elements to fulfill requirements of the mission is a very difficult, yet important task. UAS may be used in various maritime applications such as ship detection, red tide detection and monitoring, border patrol, tracking of pollution at sea and hurricane monitoring just to mention few. One of the greatest advantages of UAV is their ability to fly over dangerous and hazardous areas, where sending manned aircraft could be risky for a crew. In this article brief description of aerial unmanned system components is introduced. Firstly characteristics of unmanned aerial vehicles are presented, it continues with introducing inertial navigation system, communication systems, sensing payloads, ground control stations, and ground and recovery equipment. Next part introduces some examples of UAS for maritime applications. This is followed by suggestions of key indicators which should be taken into consideration while choosing UAS. Last part talks about configuration schemes of UAVs and sensor payloads suggested for some maritime applications.

The use of UAS in disaster response operations

Science.gov (United States)

Gkotsis, I.; Eftychidis, G.; Kolios, P.

2017-09-01

The use of UAS by the emergency services has been received with great interest since UAS provide both informant and helper support in a flexible, effective and efficient manner. This is due to the fact that, UAS can strengthen the operational capabilities related to: prevention (e.g., patrolling of large and hard to reach areas), early detection (e.g., mapping of vulnerable elements), disaster preparedness (e.g., incident inspection), response (mapping damages, search and rescue, provide an ad hoc communication network, monitor evacuation, etc). Through PREDICATE, a project concerning civilian use of drones, the necessary methodologies to guide the selection and operational use of UAS in emergencies, are developed. To guide UAS selection, the project performed a detailed needs assessment in cooperation with civil protection and law enforcement agencies. As a result of this assessment, currently available technologies and market solutions were reviewed leading to the development of an online user-friendly tool to support selection of UAS based on operational requirements. To guide the use of UAS, PREDICATE developed an intelligent path planning toolkit to automate the operation of UAS and ease their use for the various civil protection operations. By employing the aforementioned tools, emergency services will be able to better understand how to select and make use of UAS for watch-keeping and patrolling of their own disaster-prone Regions of Interest. The research, innovation and applicability behind both these tools is detailed in this work.

Ursolic acid mediates photosensitization by initiating mitochondrial-dependent apoptosis

Science.gov (United States)

Lee, Yuan-Hao; Wang, Exing; Kumar, Neeru; Glickman, Randolph D.

2013-02-01

The signaling pathways PI3K/Akt and MAPK play key roles in transcription, translation and carcinogenesis, and may be activated by light exposure. These pathways may be modulated or inhibited by naturally-occurring compounds, such as the triterpenoid, ursolic acid (UA). Previously, the transcription factors p53 and NF-kB, which transactivate mitochondrial apoptosis-related genes, were shown to be differentially modulated by UA. Our current work indicates that UA causes these effects via the mTOR and insulin-mediated pathways. UA-modulated apoptosis, following exposure to UV radiation, is observed to correspond to differential levels of oxidative stress in retinal pigment epithelial (RPE) and skin melanoma (SM) cells. Flow cytometry analysis, DHE (dihydroethidium) staining and membrane permeability assay showed that UA pretreatment potentiated cell cycle arrest and radiation-induced apoptosis selectively on SM cells while DNA photo-oxidative damage (i.e. strand breakage) was reduced, presumably by some antioxidant activity of UA in RPE cells. The UA-mediated NF-κB activation in SM cells was reduced by rapamycin pretreatment, which indicates that these agents exert inter-antagonistic effects in the PI3K/Akt/mTOR pathway. In contrast, the antagonistic effect of UA on the PI3K/Akt pathway was reversed by insulin leading to greater NF-κB and p53 activation in RPE cells. MitoTracker, a mitochondrial functional assay, indicated that mitochondria in RPE cells experienced reduced oxidative stress while those in SM cells exhibited increased oxidative stress upon UA pretreatment. When rapamycin administration was followed by UA, mitochondrial oxidative stress was increased in RPE cells but decreased in SM cells. These results indicate that UA modulates p53 and NF-κB, initiating a mitogenic response to radiation that triggers mitochondria-dependent apoptosis.

Moving UA5 into the beam

CERN Multimedia

1981-01-01

The streamer chamber of UA5, which had been operating at the ISR until Easter, was installed in its platform, in ECA4 alongside the UA2 detector and in September was moved into the beam (this photo). See Annual Report 1981 p. 128.

UAS Detection Classification and Neutralization: Market Survey 2015

Energy Technology Data Exchange (ETDEWEB)

Birch, Gabriel Carisle [Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States); Griffin, John Clark [Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States); Erdman, Matthew Kelly [Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States)

2015-07-01

The purpose of this document is to briefly frame the challenges of detecting low, slow, and small (LSS) unmanned aerial systems (UAS). The conclusion drawn from internal discussions and external reports is the following; detection of LSS UAS is a challenging problem that can- not be achieved with a single detection modality for all potential targets. Classification of LSS UAS, especially classification in the presence of background clutter (e.g., urban environment) or other non-threating targets (e.g., birds), is under-explored. Though information of avail- able technologies is sparse, many of the existing options for UAS detection appear to be in their infancy (when compared to more established ground-based air defense systems for larger and/or faster threats). Companies currently providing or developing technologies to combat the UAS safety and security problem are certainly worth investigating, however, no company has provided the statistical evidence necessary to support robust detection, identification, and/or neutralization of LSS UAS targets. The results of a market survey are included that highlights potential commercial entities that could contribute some technology that assists in the detection, classification, and neutral- ization of a LSS UAS. This survey found no clear and obvious commercial solution, though recommendations are given for further investigation of several potential systems.

Generation of Urinary Albumin Fragments Does Not Require Proximal Tubular Uptake

OpenAIRE

Weyer, K.; Nielsen, R.; Christensen, E. I.; Birn, H.

2012-01-01

Urinary albumin excretion is an important diagnostic and prognostic marker of renal function. Both animal and human urine contain large amounts of albumin fragments, but whether these fragments originate from renal tubular degradation of filtered albumin is unknown. Here, we used mice with kidneys lacking megalin and cubilin, the coreceptors that mediate proximal tubular endocytosis of albumin, to determine whether proximal tubular degradation of albumin forms the detectable urinary albumin f...

Unmanned Aircraft Systems (UAS) Traffic Management (UTM) National Campaign II

Science.gov (United States)

Aweiss, Arwa S.; Owens, Brandon D.; Rios, Joseph L.; Homola, Jeffrey R.; Mohlenbrink, Christoph P.

2018-01-01

The Unmanned Aircraft System (UAS) Traffic Management (UTM) effort at NASA aims to enable access to low-altitude airspace for small UAS. This goal is being pursued partly through partnerships that NASA has developed with the UAS stakeholder community, the FAA, other government agencies, and the designated FAA UAS Test Sites. By partnering with the FAA UAS Test Sites, NASA's UTM project has performed a geographically diverse, simultaneous set of UAS operations at locations in six states. The demonstrations used an architecture that was developed by NASA in partnership with the FAA to safely coordinate such operations. These demonstrations-the second or 'Technical Capability Level (TCL 2)' National Campaign of UTM testing-was performed from May 15 through June 9, 2017. Multiple UAS operations occurred during the testing at sites located in Alaska, Nevada, Texas, North Dakota, Virginia, and New York with multiple organizations serving as UAS Service Suppliers and/or UAS Operators per the specifications provided by NASA. By engaging various members of the UAS community in development and operational roles, this campaign provided initial validation of different aspects of the UTM concept including: UAS Service Supplier technologies and procedures; geofencing technologies/conformance monitoring; ground-based surveillance/sense and avoid; airborne sense and avoid; communication, navigation, surveillance; and human factors related to UTM data creation and display. Additionally, measures of performance were defined and calculated from the flight data to establish quantitative bases for comparing flight test activities and to provide potential metrics that might be routinely monitored in future operational UTM systems.

UA1 prototype detector

CERN Multimedia

1980-01-01

Prototype of UA1 central detector inside a plexi tube. The UA1 experiment ran at CERN's Super Proton Synchrotron and made the Nobel Prize winning discovery of W and Z particles in 1983. The UA1 central detector was crucial to understanding the complex topology of proton-antiproton events. It played a most important role in identifying a handful of Ws and Zs among billions of collisions. The detector was essentially a wire chamber - a 6-chamber cylindrical assembly 5.8 m long and 2.3 m in diameter, the largest imaging drift chamber of its day. It recorded the tracks of charged particles curving in a 0.7 Tesla magnetic field, measuring their momentum, the sign of their electric charge and their rate of energy loss (dE/dx). Atoms in the argon-ethane gas mixture filling the chambers were ionised by the passage of charged particles. The electrons which were released drifted along an electric field shaped by field wires and were collected on sense wires. The geometrical arrangement of the 17000 field wires and 6...

Spectrum for UAS Control and Non-Payload Communications

Science.gov (United States)

Kerczewski, Robert J.

2013-01-01

There is an increasing need to fly UAS in the NAS to perform missions of vital importance to National Security and Defense, Emergency Management, and Science as well as commercial applications (e.g. cargo transport). To enable integration of UAS into the National Airspace System, several critical technical barriers must be eliminated, including: Separation Assurance/Sense and Avoid - the uncertainty surrounding the ability to interoperate in ATC environments and maintain safe separation from other aircraft in the absence of an on-board pilot. Human Systems Integration - lack of standards and guidelines with respect to UAS display information as well as lack of Ground Control Station (GCS) design requirements to operate in the NAS. Certification - lack of airworthiness requirements and safety-related data specific to the full range of UAS, or for their avionics systems or other components. Communications - lack of standard, certifiable data links and aviation safety spectrum to operate such links for civil UAS control communications.

UA1: Z particle decay

CERN Multimedia

1992-01-01

A colour treated picture of the computer reconstruction of the real particle tracks emerging from a high energy proton-antiproton collision recorded in the UA1 detector at the SPS (converted to act as a collider). This picture shows the production of a Z particle that has decayed into a high energy electron and positron flying off in opposite directions (in yellow). The UA1 detector ran on the SPS accelerator at CERN between 1981 and 1993.

Ursolic acid-mediated changes in glycolytic pathway promote cytotoxic autophagy and apoptosis in phenotypically different breast cancer cells.

Science.gov (United States)

Lewinska, Anna; Adamczyk-Grochala, Jagoda; Kwasniewicz, Ewa; Deregowska, Anna; Wnuk, Maciej

2017-06-01

Plant-derived pentacyclic triterpenotids with multiple biological activities are considered as promising candidates for cancer therapy and prevention. However, their mechanisms of action are not fully understood. In the present study, we have analyzed the effects of low dose treatment (5-20 µM) of ursolic acid (UA) and betulinic acid (BA) on breast cancer cells of different receptor status, namely MCF-7 (ER + , PR +/- , HER2 - ), MDA-MB-231 (ER - , PR - , HER2 - ) and SK-BR-3 (ER - , PR - , HER2 + ). UA-mediated response was more potent than BA-mediated response. Triterpenotids (5-10 µM) caused G0/G1 cell cycle arrest, an increase in p21 levels and SA-beta-galactosidase staining that was accompanied by oxidative stress and DNA damage. UA (20 µM) also diminished AKT signaling that affected glycolysis as judged by decreased levels of HK2, PKM2, ATP and lactate. UA-induced energy stress activated AMPK that resulted in cytotoxic autophagy and apoptosis. UA-mediated elevation in nitric oxide levels and ATM activation may also account for AMPK activation-mediated cytotoxic response. Moreover, UA-promoted apoptosis was associated with decreased pERK1/2 signals and the depolarization of mitochondrial membrane potential. Taken together, we have shown for the first time that UA at low micromolar range may promote its anticancer action by targeting glycolysis in phenotypically distinct breast cancer cells.

Mapping with Small UAS: A Point Cloud Accuracy Assessment

Science.gov (United States)

Toth, Charles; Jozkow, Grzegorz; Grejner-Brzezinska, Dorota

2015-12-01

Interest in using inexpensive Unmanned Aerial System (UAS) technology for topographic mapping has recently significantly increased. Small UAS platforms equipped with consumer grade cameras can easily acquire high-resolution aerial imagery allowing for dense point cloud generation, followed by surface model creation and orthophoto production. In contrast to conventional airborne mapping systems, UAS has limited ground coverage due to low flying height and limited flying time, yet it offers an attractive alternative to high performance airborne systems, as the cost of the sensors and platform, and the flight logistics, is relatively low. In addition, UAS is better suited for small area data acquisitions and to acquire data in difficult to access areas, such as urban canyons or densely built-up environments. The main question with respect to the use of UAS is whether the inexpensive consumer sensors installed in UAS platforms can provide the geospatial data quality comparable to that provided by conventional systems. This study aims at the performance evaluation of the current practice of UAS-based topographic mapping by reviewing the practical aspects of sensor configuration, georeferencing and point cloud generation, including comparisons between sensor types and processing tools. The main objective is to provide accuracy characterization and practical information for selecting and using UAS solutions in general mapping applications. The analysis is based on statistical evaluation as well as visual examination of experimental data acquired by a Bergen octocopter with three different image sensor configurations, including a GoPro HERO3+ Black Edition, a Nikon D800 DSLR and a Velodyne HDL-32. In addition, georeferencing data of varying quality were acquired and evaluated. The optical imagery was processed by using three commercial point cloud generation tools. Comparing point clouds created by active and passive sensors by using different quality sensors, and finally

Dynamic mapping of EDDL device descriptions to OPC UA

Science.gov (United States)

Atta Nsiah, Kofi; Schappacher, Manuel; Sikora, Axel

2017-07-01

OPC UA (Open Platform Communications Unified Architecture) is already a well-known concept used widely in the automation industry. In the area of factory automation, OPC UA models the underlying field devices such as sensors and actuators in an OPC UA server to allow connecting OPC UA clients to access device-specific information via a standardized information model. One of the requirements of the OPC UA server to represent field device data using its information model is to have advanced knowledge about the properties of the field devices in the form of device descriptions. The international standard IEC 61804 specifies EDDL (Electronic Device Description Language) as a generic language for describing the properties of field devices. In this paper, the authors describe a possibility to dynamically map and integrate field device descriptions based on EDDL into OPCUA.

The heterothallic sugarbeet pathogen Cercospora beticola contains exon fragments of both MAT genes that are homogenized by concerted evolution.

Science.gov (United States)

Bolton, Melvin D; de Jonge, Ronnie; Inderbitzin, Patrik; Liu, Zhaohui; Birla, Keshav; Van de Peer, Yves; Subbarao, Krishna V; Thomma, Bart P H J; Secor, Gary A

2014-01-01

Dothideomycetes is one of the most ecologically diverse and economically important classes of fungi. Sexual reproduction in this group is governed by mating type (MAT) genes at the MAT1 locus. Self-sterile (heterothallic) species contain one of two genes at MAT1 (MAT1-1-1 or MAT1-2-1) and only isolates of opposite mating type are sexually compatible. In contrast, self-fertile (homothallic) species contain both MAT genes at MAT1. Knowledge of the reproductive capacities of plant pathogens are of particular interest because recombining populations tend to be more difficult to manage in agricultural settings. In this study, we sequenced MAT1 in the heterothallic Dothideomycete fungus Cercospora beticola to gain insight into the reproductive capabilities of this important plant pathogen. In addition to the expected MAT gene at MAT1, each isolate contained fragments of both MAT1-1-1 and MAT1-2-1 at ostensibly random loci across the genome. When MAT fragments from each locus were manually assembled, they reconstituted MAT1-1-1 and MAT1-2-1 exons with high identity, suggesting a retroposition event occurred in a homothallic ancestor in which both MAT genes were fused. The genome sequences of related taxa revealed that MAT gene fragment pattern of Cercospora zeae-maydis was analogous to C. beticola. In contrast, the genome of more distantly related Mycosphaerella graminicola did not contain MAT fragments. Although fragments occurred in syntenic regions of the C. beticola and C. zeae-maydis genomes, each MAT fragment was more closely related to the intact MAT gene of the same species. Taken together, these data suggest MAT genes fragmented after divergence of M. graminicola from the remaining taxa, and concerted evolution functioned to homogenize MAT fragments and MAT genes in each species. Published by Elsevier Inc.

No increased sperm DNA fragmentation index in semen containing human papillomavirus or herpesvirus

DEFF Research Database (Denmark)

Kaspersen, Maja Døvling; Bungum, Mona; Fedder, Jens

2013-01-01

It remains unknown whether human papillomaviruses (HPVs) or human herpesviruses (HHVs) in semen affect sperm DNA integrity. We investigated whether the presence of these viruses in semen was associated with an elevated sperm DNA fragmentation index. Semen from 76 sperm donors was examined by a PCR......-based hybridization array that identifies all HHVs and 35 of the most common HPVs. Sperm DNA integrity was determined by the sperm chromatin structure assay. HPVs or HHVs, or both, were found in 57% of semen samples; however, sperm DNA fragmentation index was not increased in semen containing these viruses....

Incorporating Unmanned Aircraft Systems (UAS) into High School Curricula in Hawaii

Science.gov (United States)

McGillivary, P. A.; Lukaczyk, T.; Brendan, B.; Tomita, M.; Ralston, T.; Purdy, G.

2016-12-01

The availability of low-cost unmanned aircraft systems (UAS) permits their integration in educational programs. We report on experiences and future opportunities for incorporating UAS into High School curricula in Hawaii. We first review existing high school UAS programs and teaching material to highlight curricula options and needs. By working on the privately owned Island of Lana'i, we had permission for extensive UAS operation. Our initial focus of UAS educational outreach was on coastal ecosystems where erosion of overgrazed lands affects coral reefs and traditional coastal Hawaiian fishpond restoration projects which include high school students. We provide results of our classroom approach allowing students to learn to fly small, inexpensive UAS and discuss the different results at different grade levels. In addition to providing basic concepts of flight aeronautics, we reviewed information on safe and legal operation of UAS, as well as data management issues including geo-registration and imaging mosaics. We recommend science projects where UAS can study short-term events (e.g. storm runoff) or can be used for routine environmental monitoring over longer periods. Additionally, by linking students with local drone and drone racing clubs student participation and interest in UAS was extended beyond the classroom in a complementary manner. We propose inclusion of UAS into a future high school curriculum via a program called the Moonshot Laboratory which strives to repurpose traditional education structures toward design thinking, making use of individual and group collaborations to address self-selected projects relevant to local community interests. A Moonshot facility allows students to spend a portion of their week in a technology equipped makerspace, with access to university, business and community mentors, both local and remote. UAS projects are expected to address basic student questions, such as: how can I build a drone to take water samples?; how can I

HALE UAS Concept of Operations. Version 3.0

Science.gov (United States)

2006-01-01

This document is a system level Concept of Operations (CONOPS) from the perspective of future High Altitude Long Endurance (HALE) Unmanned Aircraft Systems (UAS) service providers and National Airspace System (NAS) users. It describes current systems (existing UAS), describes HALE UAS functions and operations to be performed (via sample missions), and offers insight into the user s environment (i.e., the UAS as a system of systems). It is intended to be a source document for NAS UAS operational requirements, and provides a construct for government agencies to use in guiding their regulatory decisions, architecture requirements, and investment strategies. Although it does not describe the technical capabilities of a specific HALE UAS system (which do, and will vary widely), it is intended to aid in requirements capture and to be used as input to the functional requirements and analysis process. The document provides a basis for development of functional requirements and operational guidelines to achieve unrestricted access into the NAS. This document is an FY06 update to the FY05 Access 5 Project-approved Concept of Operations document previously published in the Public Domain on the Access 5 open website. This version is recommended to be approved for public release also. The updates are a reorganization of materials from the previous version with the addition of an updated set of operational requirements, inclusion of sample mission scenarios, and identification of roles and responsibilities of interfaces within flight phases.

168/E online for UA1

CERN Multimedia

1983-01-01

Five 168/E processors and associated specialized interface hardware made an importartant contribution to the UA1 experiment. The processors provided an online event display facility, and also flagged candidate events. See Annual Report 1983 p. 75, and photo 8305815X, 8395813X. This photo shows the team including DD personnel and UA1 members. On the foreground left, is Michel Demoulin. On the background, 3rd from left, is Adolfo Fucci, last Sergio Cittolin.

Technology Trends in Small Unmanned Aircraft Systems (sUAS) and Counter-UAS: A Five Year Outlook

Science.gov (United States)

2017-11-01

I N S T I T U T E F O R D E F E N S E ANALYSES Technology Trends in Small Unmanned Aircraft Systems (sUAS) and Counter-UAS: A Five-Year Outlook...the copyright license under the clause at DFARS 252.227-7013 (a)(16) [June 2013]. INSTITUTE FOR DEFENSE ANALYSES IDA Paper P-8823 Technology Trends...threats to infrastructure posed across all domains—air, land, sea, and cyber. Although threats and technologies are rapidly evolving across all

Radical fragmentation of six-membered oxygen-containing heterocycles

International Nuclear Information System (INIS)

Petryaev, E.P.; Kosobutskij, V.S.; Shadyro, O.I.

1982-01-01

Using chromatography, the composition and radiation-chemical yields of final products of desctruction of six-member saturated oxygen-containing heterocycles (the effect of #betta#-radiation on aqueous solutions of tetrahydropyran, 1,3-dioxane, 2,2 dimethyl-1,3 dioxane, 1,4-dioxane, paraldehyde) have been determined. It is established that the identified products are formed at the expense of decomposition of primary radicals of the initial compounds and point to the realization of the following fragmentation ways: 1) #betta#-scattering, 2) #betta#-scattering with a subsequent 1,5 migration of an H atom, 3) simultaneous rupture of two vicinal, relative to the radical center, bonds. A formation mechanism of the substances desctruction products is suggested. Material balance of the product yields of 1,3-dioxane radical synchronous decomposition is presented

Forest Fragmentation and Selective Logging Have Inconsistent Effects on Multiple Animal-Mediated Ecosystem Processes in a Tropical Forest

Science.gov (United States)

Schleuning, Matthias; Farwig, Nina; Peters, Marcell K.; Bergsdorf, Thomas; Bleher, Bärbel; Brandl, Roland; Dalitz, Helmut; Fischer, Georg; Freund, Wolfram; Gikungu, Mary W.; Hagen, Melanie; Garcia, Francisco Hita; Kagezi, Godfrey H.; Kaib, Manfred; Kraemer, Manfred; Lung, Tobias; Schaab, Gertrud; Templin, Mathias; Uster, Dana; Wägele, J. Wolfgang; Böhning-Gaese, Katrin

2011-01-01

Forest fragmentation and selective logging are two main drivers of global environmental change and modify biodiversity and environmental conditions in many tropical forests. The consequences of these changes for the functioning of tropical forest ecosystems have rarely been explored in a comprehensive approach. In a Kenyan rainforest, we studied six animal-mediated ecosystem processes and recorded species richness and community composition of all animal taxa involved in these processes. We used linear models and a formal meta-analysis to test whether forest fragmentation and selective logging affected ecosystem processes and biodiversity and used structural equation models to disentangle direct from biodiversity-related indirect effects of human disturbance on multiple ecosystem processes. Fragmentation increased decomposition and reduced antbird predation, while selective logging consistently increased pollination, seed dispersal and army-ant raiding. Fragmentation modified species richness or community composition of five taxa, whereas selective logging did not affect any component of biodiversity. Changes in the abundance of functionally important species were related to lower predation by antbirds and higher decomposition rates in small forest fragments. The positive effects of selective logging on bee pollination, bird seed dispersal and army-ant raiding were direct, i.e. not related to changes in biodiversity, and were probably due to behavioural changes of these highly mobile animal taxa. We conclude that animal-mediated ecosystem processes respond in distinct ways to different types of human disturbance in Kakamega Forest. Our findings suggest that forest fragmentation affects ecosystem processes indirectly by changes in biodiversity, whereas selective logging influences processes directly by modifying local environmental conditions and resource distributions. The positive to neutral effects of selective logging on ecosystem processes show that the

Neuromorphic UAS Collision Avoidance

Data.gov (United States)

National Aeronautics and Space Administration — Collision avoidance for unmanned aerial systems (UAS) traveling at high relative speeds is a challenging task. It requires both the detection of a possible collision...

UAS-NAS Flight Test Series 3: Test Environment Report

Science.gov (United States)

Hoang, Ty; Murphy, Jim; Otto, Neil

2016-01-01

The desire and ability to fly Unmanned Aircraft Systems (UAS) in the National Airspace System (NAS) is of increasing urgency. The application of unmanned aircraft to perform national security, defense, scientific, and emergency management are driving the critical need for less restrictive access by UAS to the NAS. UAS represent a new capability that will provide a variety of services in the government (public) and commercial (civil) aviation sectors. The growth of this potential industry has not yet been realized due to the lack of a common understanding of what is required to safely operate UAS in the NAS. NASA's UAS Integration in the NAS Project is conducting research in the areas of Separation Assurance/Sense and Avoid Interoperability (SSI), Human Systems Integration (HSI), and Communications (Comm), and Certification to support reducing the barriers of UAS access to the NAS. This research is broken into two research themes namely, UAS Integration and Test Infrastructure. UAS Integration focuses on airspace integration procedures and performance standards to enable UAS integration in the air transportation system, covering Detect and Avoid (DAA) performance standards, command and control performance standards, and human systems integration. The focus of Test Infrastructure is to enable development and validation of airspace integration procedures and performance standards, including integrated test and evaluation. In support of the integrated test and evaluation efforts, the Project will develop an adaptable, scalable, and schedulable relevant test environment capable of evaluating concepts and technologies for unmanned aircraft systems to safely operate in the NAS. To accomplish this task, the Project is conducting a series of human-in-the-loop (HITL) and flight test activities that integrate key concepts, technologies and/or procedures in a relevant air traffic environment. Each of the integrated events will build on the technical achievements, fidelity, and

UAS Demand Generator for Discrete Airspace Density, Phase I

Data.gov (United States)

National Aeronautics and Space Administration — A key component to solving many engineering challenges of UAS integration into the National Airspace System is the ability to state the numbers of forecasted UAS by...

Evaluation of Forest Health Conditions using Unmanned Aircraft Systems (UAS)

Science.gov (United States)

Hatfield, M. C.; Heutte, T. M.

2016-12-01

US Forest Service Alaska Region Forest Health Protection (FHP) and University of Alaska Fairbanks, Alaska Center for Unmanned Aircraft Systems Integration (ACUASI) are evaluating capability of Unmanned Aerial Systems (UAS) to monitor forest health conditions in Alaska's Interior Region. In July 2016, the team deployed UAS at locations in the Tanana Valley near Fairbanks in order to familiarize FHP staff with capabilities of UAS for evaluating insect and disease damage. While many potential uses of UAS to evaluate and monitor forest health can be envisioned, this project focused on use of a small UAS for rapid assessment of insect and disease damage. Traditional ground-based methods are limited by distance from ground to canopy and inaccessibility of forest stands due to terrain conditions. Observation from fixed-wing aircraft provide a broad overview of conditions but are limited by minimum safe flying altitude (500' AGL) and aircraft speed ( 100 mph). UAS may provide a crucial bridge to fill in gaps between ground and airborne methods, and offer significant cost savings and greater flexibility over helicopter-based observations. Previous uses of UAS for forest health monitoring are limited - this project focuses on optimizing choice of vehicle, sensors, resolution and area scanned from different altitudes, and use of visual spectrum vs NIR image collection. The vehicle selected was the ACUASI Ptarmigan, a small hexacopter (based on DJI S800 airframe and 3DR autopilot) capable of carrying a 1.5 kg payload for 15 min for close-range environmental monitoring missions. Sites were chosen for conditions favorable to UAS operation and presence of forest insect and disease agents including spruce broom rust, aspen leaf miner, birch leaf roller, and willow leafblotch miner. A total of 29 flights were conducted with 9000+ images collected. Mission variables included camera height, UAS speed, and medium- (Sony NEX-7) vs low-resolution (GoPro Hero) cameras. Invaluable

UAS-NAS Integrated Human in the Loop: Test Environment Report

Science.gov (United States)

Murphy, Jim; Otto, Neil; Jovic, Srba

2015-01-01

The desire and ability to fly Unmanned Aircraft Systems (UAS) in the National Airspace System (NAS) is of increasing urgency. The application of unmanned aircraft to perform national security, defense, scientific, and emergency management are driving the critical need for less restrictive access by UAS to the NAS. UAS represent a new capability that will provide a variety of services in the government (public) and commercial (civil) aviation sectors. The growth of this potential industry has not yet been realized due to the lack of a common understanding of what is required to safely operate UAS in the NAS. NASA's UAS Integration in the NAS Project is conducting research in the areas of Separation Assurance/Sense and Avoid Interoperability (SSI), Human Systems Integration (HSI), and Communication to support reducing the barriers of UAS access to the NAS. This research was broken into two research themes namely, UAS Integration and Test Infrastructure. UAS Integration focuses on airspace integration procedures and performance standards to enable UAS integration in the air transportation system, covering Sense and Avoid (SAA) performance standards, command and control performance standards, and human systems integration. The focus of the Test Infrastructure theme was to enable development and validation of airspace integration procedures and performance standards, including the execution of integrated test and evaluation. In support of the integrated test and evaluation efforts, the Project developed an adaptable, scalable, and schedulable relevant test environment incorporating live, virtual, and constructive elements capable of validating concepts and technologies for unmanned aircraft systems to safely operate in the NAS. To accomplish this task, the Project planned to conduct three integrated events: a Human-in-the-Loop simulation and two Flight Test series that integrated key concepts, technologies and/or procedures in a relevant air traffic environment. Each of

Staffing for Unmanned Aircraft Systems (UAS) Operations

Science.gov (United States)

2016-06-01

should be enlisted or officer). Rather, an illustrative model was designed to remove emotion and cultural bias from this discussion and enable an...maintenance and intelligence support personnel associated with UAS operations and the impact associated with the rapid maturation of technology on...implications associated with this maturation of technology are not addressed in this paper; however, further research is recommended. Figure 1. DoD UAS

Safety Analysis For Evaluating (SAFE) sUAS, Phase I

Data.gov (United States)

National Aeronautics and Space Administration — NASA's Unmanned Aircraft Systems Integration in the NAS (UAS in the NAS) project is aimed at developing new technologies to enable safe operations of UAS in the NAS....

UAS Mapping as an alternative for land surveying techniques?

Directory of Open Access Journals (Sweden)

L. Devriendt

2014-03-01

Full Text Available Can a UAS mapping technique compete with standard surveying techniques? Since the boom in different RPAS (remotely piloted air system, UAV (unmanned aerial vehicle, or UAS (unmanned aerial system, this is one of the crucial questions when it comes to UAS mappings. Not the looks and feels are important but the reliability, ease-to-use, and accuracy that you get with a system based on hardware and corresponding software. This was also one of the issues that the Dutch Land Registry asked a few months ago aimed at achieving an effective and usable system for updating property boundaries in new-build districts. Orbit GT gave them a ready-made answer: a definitive outcome based on years of research and development in UAS mapping technology and software.

Enabling Earth Science Measurements with NASA UAS Capabilites

Science.gov (United States)

Albertson, Randal; Schoenung, Susan; Fladeland, Matthew M.; Cutler, Frank; Tagg, Bruce

2015-01-01

NASA's Airborne Science Program (ASP) maintains a fleet of manned and unmanned aircraft for Earth Science measurements and observations. The unmanned aircraft systems (UAS) range in size from very large (Global Hawks) to medium (SIERRA, Viking) and relatively small (DragonEye). UAS fly from very low (boundary layer) to very high altitude (stratosphere). NASA also supports science and applied science projects using UAS operated by outside companies or agencies. The aircraft and accompanying data and support systems have been used in numerous investigations. For example, Global Hawks have been used to study both hurricanes and atmospheric composition. SIERRA has been used to study ice, earthquake faults, and coral reefs. DragonEye is being used to measure volcanic emissions. As a foundation for NASA's UAS work, Altair and Ikkana not only flew wildfires in the Western US, but also provided major programs for the development of real-time data download and processing capabilities. In early 2014, an advanced L-band Synthetic Aperture Radar (SAR) also flew for the first time on Global Hawk, proving the utility of UAVSAR, which has been flying successfully on a manned aircraft. In this paper, we focus on two topics: 1) the results of a NASA program called UAS-Enabled Earth Science, in which three different science teams flew (at least) two different UAS to demonstrate platform performance, airspace integration, sensor performance, and applied science results from the data collected; 2) recent accomplishments with the high altitude, long-duration Global Hawks, especially measurements from several payload suites consisting of multiple instruments. The latest upgrades to data processing, communications, tracking and flight planning systems will also be described.

Identification of special fragments containing the 5' end of polivirus RNA after ribonuclease III digestion

Energy Technology Data Exchange (ETDEWEB)

Harris, T.J.R.; Dunn, J.J.; Wimmer, E.

1978-11-01

The small protein (VPg) covalently linked to the 5' end of the poliovirus Type 1 (PV-1) RNA has been labeled in vitro with /sup 125/I usingthe Bolton and Hunter reagent. The RNA is not degraded under the conditions used and nearly all the label enters VPg and not the polynucleotide chain. When this /sup 125/I-labeled RNA is cleaved with RNase III at low monovalent salt concentrations, one major /sup 125/I-labeled fragment, approximately 100 nucleotides long, is produced. The corresponding fragment from similar digests of /sup 32/P-labeled RNA has also been identified. The /sup 32/P-labeled fragment changes electrophoretic mobility after protease treatment indicating that it contains VPg. Furthermore, the RNase T1 oligonucleotide known to be at the 5' terminus of poliovirus RNA is found in T1 digests of the purified fragment. These results confirm that the fragment is derived from the 5' end of the RNA. This fragment will be useful in studies concerning the initiation of protein synthesis during poliovirus infection.

The use of Unmanned Aircraft Systems (UAS in combat operations

Directory of Open Access Journals (Sweden)

Tomasz GUGAŁA

2011-01-01

Full Text Available In this publication has been presented selected aspects of the wide spectrum of Unmanned Aircraft Systems (UAS/UAV adaptation within the military structures. With regard to many years of experience of the author within the national and NATO Integrated Air Defence Command and Control System, the objective paper is also related to the Airspace Management (ASM in the light of present and future use of UAS in this environment. Wider and wider application of UAS in many areas of human life as well as in military and civilian services is forcing to take the definite steps in connection with elaboration of “New Concept of Polish Airspace Management in Context of UAS Development”, what is currently under consideration of the author. The respective publication is simultaneously the specific trial for inspiration of the civilian society to take an initiative heading for implementation of UAS out of military service.

Search for the top quark at the UA2 detector at the CERN proton-antiproton collider

International Nuclear Information System (INIS)

Moniez, M.

1988-06-01

The results of a search for the top quark, done in the UA2 experiment at CERN is presented in this thesis. The data from proton-antiproton collisions, at 546 and 630 GeV energy in the centre-of-mass system, representing a total integrated luminosity of 894 nb -1 accumulated by the UA2 detector, has been used. A signal coming from the semi-leptonic decay of the top quark (t decays to b + electron + neutrino) has been searched for in the event sample containing an identified electron associated with 0.1 or 2 jets. A detailed study of the experimental background coming from misidentified electrons has been made; furthermore, the standard sources of real electrons have been estimated using a simulation program. Taking into account these background evaluations, and using a top production Monte-Carlo, a statistical analysis of the events containing one electron and 2 jets allows us to discuss a lower limit on the top quark mass. An upper limit on top production through the process proton-antiproton goes to top-antitop is derived, as a function of the top mass, from our data. Extrapolating the background and production evaluations to UA2'indicates that this experiment should be sensitive to top masses below 70 GeV/c 2 [fr

Fragmentation and dusting of large kidney stones using compact, air-cooled, high peak power, 1940-nm, Thulium fiber laser

Science.gov (United States)

Hardy, Luke A.; Gonzalez, David A.; Irby, Pierce B.; Fried, Nathaniel M.

2018-02-01

Previous Thulium fiber laser lithotripsy (TFL) studies were limited to a peak power of 70 W (35 mJ / 500 μs), requiring operation in dusting mode with low pulse energy (35 mJ) and high pulse rate (300 Hz). In this study, a novel, compact, air-cooled, TFL capable of operating at up to 500 W peak power, 50 W average power, and 2000 Hz, was tested. The 1940-nm TFL was used with pulse duration (500 μs), average power (10 W), and fiber (270- μm-core) fixed, while pulse energy and pulse rate were changed. A total of 23 large uric acid (UA) stones and 16 large calcium oxalate monohydrate (COM) stones were each separated into 3 modes (Group 1-"Dusting"- 33mJ/300Hz; Group 2-"Fragmentation"-200mJ/50Hz; Group 3-"Dual mode"-Fragmentation then Dusting). The fiber was held manually in contact with stone on a 2-mm-mesh sieve submerged in a flowing saline bath. UA ablation rates were 2.3+/-0.8, 2.3+/-0.2, and 4.4+/-0.8 mg/s and COM ablation rates were 0.4+/-0.1, 1.0+/-0.1, and 0.9+/-0.4 mg/s, for Groups 1, 2, and 3. Dual mode provided 2x higher UA ablation rates than other modes. COM ablation threshold is 3x higher than UA, so dusting provided lower COM ablation rates than other modes. Future studies will explore higher average laser power than 10 W for rapid TFL ablation of large stones.

Unmanned Aircraft Systems (UAS) Integration in the National Airspace System (NAS) Project, UAS Control and Non-Payload Communication System Phase-1 Flight Test Results

Science.gov (United States)

Griner, James H.

2014-01-01

NASA's UAS Integration in the NAS project, has partnered with Rockwell Collins to develop a concept Control and Non-Payload Communication (CNPC) system prototype radio, operating on recently allocated UAS frequency spectrum bands. This prototype radio is being used to validate initial proposed performance requirements for UAS control communications. This presentation will give an overview of the current status of the prototype radio development, and results from phase 1 flight tests conducted during 2013.

Deployment of Small Unmanned Aerial Systems (sUAS) in Emergency and Disaster Response Scenarios to Support Local Emergency Management Agencies

Science.gov (United States)

Calamaio, C. L.; Walker, J.; Beck, J. M.; Graves, S. J.; Johnson, C.

2017-12-01

Researchers at the Information Technology and Systems Center at the University of Alabama in Huntsville are working closely with the Madison County Emergency Management Agency (EMA), GeoHuntsville's UAS Working Group, and the NOAA UAS Program Office, to conduct a series of practical demonstrations testing the use of small unmanned aerial systems (sUAS) for emergency response activities in Madison County, Alabama. These exercises demonstrate the use of UAS to detect and visualize hazards in affected areas via the delivery of aerial imagery and associated data products to law enforcement first responders in a variety of different scenarios, for example, search and rescue, tornado track mapping, damage assessment, and situational awareness/containment during active shooter incidents. In addition to showcasing the use of UAS as a tool for emergency services, these pilot exercises provide the opportunity to engage the appropriate stakeholders from several communities including first responders, geospatial intelligence, active members of the unmanned systems industry, and academia. This presentation will showcase the challenges associated with delivering quality data products for emergency services in a timely manner as well as the related challenges in integrating the technology into local emergency management.

Improvement programme of the UA2 detector

International Nuclear Information System (INIS)

Merkel, B.

1985-01-01

The author describes the process of modifying the present UA2 detector with the aim to match its performance to that of the improved Spp-barS Collider. The new design results from a number of choices dictated by the following considerations: the upgraded UA2 must be operational in 1987, as soon as the Collider resumes operation, in order to maximise its physics output during the period when TEV 1, with nearly three times as high a c.m. energy, has not yet taken over leadership; the upgraded UA2 must remain competitive on the major physics issues rather than diversify its detection capabilities; priority is given to the quality of the missing transverse energy measurement; and modifications to the vertex detector aim at ensuring that multivertex events can be reconstructed and at improving the detector performance in relation with electron identification

Inhibiting prolyl isomerase activity by hybrid organic-inorganic molecules containing rhodium(II) fragments.

Science.gov (United States)

Coughlin, Jane M; Kundu, Rituparna; Cooper, Julian C; Ball, Zachary T

2014-11-15

A small molecule containing a rhodium(II) tetracarboxylate fragment is shown to be a potent inhibitor of the prolyl isomerase FKBP12. The use of small molecules conjugates of rhodium(II) is presented as a general strategy for developing new protein inhibitors based on distinct structural and sequence features of the enzyme active site. Copyright © 2014 Elsevier Ltd. All rights reserved.

Potential uses of small unmanned aircraft systems (UAS) in weed research

DEFF Research Database (Denmark)

Rasmussen, Jesper; Nielsen, Jon; Garcia Ruiz, Francisco Jose

2013-01-01

applications in UAS imagery weed research. In two experiments with post-emergence weed harrowing in barley, the crop resistance parameter, which reflects the crop response to harrowing, was unaffected by image capture altitude in the range from 1 to 50 m. This corresponded to image spatial resolution...... with ground truth data. UAS imagery also gave excellent results in logarithmic sprayer experiments in oilseed rape, where we captured 37 m long plots in each image from an altitude of 35 m. Furthermore, perennial weeds could be mapped from UAS images. These first experiences with a small rotary-wing UAS show...

UAS Demand Generation and Airspace Performance Impact Prediction, Phase I

Data.gov (United States)

National Aeronautics and Space Administration — IAI and its academic partner propose to develop technology that will generate credible future demand for UAS vehicles given proposed UAS missions. The technology...

UAS Integration in the NAS Project and Future Autonomy Research

Science.gov (United States)

Johnson, Charles W.

2014-01-01

This presentation highlights NASA use of unmanned aircraft systems (UAS) and related technologies for civil purposes. This briefing will give more insight into the UAS projects progress and future goals.

Unlocking the potential of small unmanned aircraft systems (sUAS) for Earth observation

Science.gov (United States)

Hugenholtz, C.; Riddell, K.; Barchyn, T. E.

2012-12-01

Small unmanned aircraft systems (sUAS, cost, and flexibility for scientists, and provides new opportunities to match the scale of sUAS data to the scale of the geophysical phenomenon under investigation. Although a mechanism is in place to make sUAS available to researchers and other non-military users through the US Federal Aviation Administration's Modernization and Reform Act of 2012 (FAAMRA), there are many regulatory hurdles before they are fully accepted and integrated into the National Airspace System. In this talk we will provide a brief overview of the regulatory landscape for sUAS, both in the USA and in Canada, where sUAS regulations are more flexible. We critically outline potential advantages and disadvantages of sUAS for EO applications under current and potential regulations. We find advantages: relatively low cost, potentially high temporal resolution, rapidly improving technology, and operational flexibility. We also find disadvantages: limited temporal and spatial extent, limited accuracy assessment and methodological development, and an immature regulatory landscape. From a case study we show an example of the accuracy of a photogrammetrically-derived digital terrain map (DTM) from sUAS imagery. We also compare the sUAS DTM to a LiDAR DTM. Our results suggest that sUAS-acquired imagery may provide a low-cost, rapid, and flexible alternative to airborne LiDAR. Overall, we are encouraged about the potential of sUAS for geophysical measurements; however, understanding and compliance with regulations is paramount to ensure that research is conducted legally and responsibly. Because UAS are new outside of military operations, we hope researchers will proceed carefully to ensure this great scientific opportunity remains a long term tool.

A Summary of Two Recent UAS Command and Control (C2) Communications Feasibility Studies

Science.gov (United States)

Ponchak, Denise S.; Auld, Elisabeth; Church, Gary; Henriksen, Stephen

2016-01-01

In Spring of 2015, the NextGen Institute conducted two UAS C2 Communications Feasibility Studies on behalf of the FAA UAS Integration Office to develop two limited UAS C2 operational examples, each involving low-altitude BLOS (Beyond Line of Sight) Line of Communication (LOC) UAS applications, as part of assessing the myriad practical UAS C2 deployment challenges associated with these approaches. The studies investigated the feasibility of "Point-to-Point" (PTP) and "Network" approaches to UAS C2 to better understand potential user needs and to explore evolutionary paths to establishing a nation-wide system for delivering UAS C2 communications. This paper will summarize the solicitation, approach and results of the two studies teams led by Aviation Management Associates, Inc. and Exelis Inc.

Straightforward hit identification approach in fragment-based discovery of bromodomain-containing protein 4 (BRD4) inhibitors.

Science.gov (United States)

Borysko, Petro; Moroz, Yurii S; Vasylchenko, Oleksandr V; Hurmach, Vasyl V; Starodubtseva, Anastasia; Stefanishena, Natalia; Nesteruk, Kateryna; Zozulya, Sergey; Kondratov, Ivan S; Grygorenko, Oleksandr O

2018-05-09

A combination approach of a fragment screening and "SAR by catalog" was used for the discovery of bromodomain-containing protein 4 (BRD4) inhibitors. Initial screening of 3695-fragment library against bromodomain 1 of BRD4 using thermal shift assay (TSA), followed by initial hit validation, resulted in 73 fragment hits, which were used to construct a follow-up library selected from available screening collection. Additionally, analogs of inactive fragments, as well as a set of randomly selected compounds were also prepared (3 × 3200 compounds in total). Screening of the resulting sets using TSA, followed by re-testing at several concentrations, counter-screen, and TR-FRET assay resulted in 18 confirmed hits. Compounds derived from the initial fragment set showed better hit rate as compared to the other two sets. Finally, building dose-response curves revealed three compounds with IC 50  = 1.9-7.4 μM. For these compounds, binding sites and conformations in the BRD4 (4UYD) have been determined by docking. Copyright © 2018 Elsevier Ltd. All rights reserved.

Search for top in UA2

International Nuclear Information System (INIS)

Repellin, J.P.

1989-01-01

A search for the top quark in the data collected during 1988 by the UA2 collaboration at the CERN proton-antiproton collider is presented. In UA2 the selected decay mode is t → eν-barb. The present report is limited to the study of topologies with an electron, a neutrino, and two or more jets. With an integrated luminosity of 2.5 pb -1 the data do not show any contribution from top and at this preliminary stage of the analysis a top mass between 30 and 60 GeV seems excluded. (K.A.) 9 refs.; 9 figs.; 2 tabs

JUBA (Joint UAS-Balloon Activities) Final Campaign Report.

Energy Technology Data Exchange (ETDEWEB)

Dexheimer, Darielle [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Apple, Monty [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Callow, Diane Schafer [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Longbottom, Casey Michael [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Novick, David K. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Wilson, Christopher W. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

2018-02-01

Using internal investment funds within Sandia National Laboratories’ (SNL) Division 6000, JUBA was a collaborative exercise between SNL Orgs. 6533 & 6913 (later 8863) to demonstrate simultaneous flights of tethered balloons and UAS on the North Slope of Alaska. JUBA UAS and tethered balloon flights were conducted within the Restricted Airspace associated with the ARM AMF3 site at Oliktok Point, Alaska. The Restricted Airspace occupies a 2 nautical mile radius around Oliktok Point. JUBA was conducted at the Sandia Arctic Site, which is approximately 2 km east-southeast of the AMF3. JUBA activities occurred from 08/08/17 – 08/10/17. Atmospheric measurements from tethered balloons can occur for a long duration, but offer limited spatial variation. Measurements from UAS could offer increased spatial variability.

Building Change Detection from Harvey using Unmanned Aerial System (UAS)

Science.gov (United States)

Chang, A.; Yeom, J.; Jung, J.; Choi, I.

2017-12-01

Unmanned Aerial System (UAS) is getting to be the most important technique in recent days since the fine spatial and high temporal resolution data previously unobtainable from traditional remote sensing platforms. Advanced UAS data can provide a great opportunity for disaster monitoring. Especially, building change detection is the one of the most important topics for damage assessment and recovery from disasters. This study is proposing a method to monitor building change with UAS data for Holiday Beach in Texas, where was directly hit by Harvey on 25 August 2017. This study adopted 3D change detection to monitor building damage and recovery levels with building height as well as natural color information. We used a rotorcraft UAS to collect RGB data twice on 9 September and 18 October 2017 after the hurricane. The UAS data was processed using Agisoft Photoscan Pro Software to generate super high resolution dataset including orthomosaic, DSM (Digital Surface Model), and 3D point cloud. We compared the processed dataset with an airborne image considerable as before-hurricane data, which was acquired on January 2016. Building damage and recovery levels were determined by height and color change. The result will show that UAS data is useful to assess building damage and recovery for affected area by the natural disaster such as Harvey.

Small UAS Test Area at NASA's Dryden Flight Research Center

Science.gov (United States)

Bauer, Jeffrey T.

2008-01-01

This viewgraph presentation reviews the areas that Dryden Flight Research Center has set up for testing small Unmanned Aerial Systems (UAS). It also reviews the requirements and process to use an area for UAS test.

A Novel Biomolecule-Mediated Reduction of Graphene Oxide: A Multifunctional Anti-Cancer Agent.

Science.gov (United States)

Choi, Yun-Jung; Kim, Eunsu; Han, JaeWoong; Kim, Jin-Hoi; Gurunathan, Sangiliyandi

2016-03-18

Graphene oxide (GO) is a monolayer of carbon atoms that form a dense honeycomb structure, consisting of hydroxyl and epoxide functional groups on the two accessible sides and carboxylic groups at the edges. In contrast, graphene is a two-dimensional sheet of sp2-hybridized carbon atoms packed into a honeycomb lattice. Graphene has great potential for use in biomedical applications due to its excellent physical and chemical properties. In this study, we report a facile and environmentally friendly approach for the synthesis of reduced graphene oxide (rGO) using uric acid (UA). The synthesized uric acid-reduced graphene oxide (UA-rGO) was fully characterized by ultraviolet-visible (UV-Vis) absorption spectra, X-ray diffraction (XRD), dynamic light scattering (DLS), Fourier transform infrared (FTIR), scanning electron microscopy (SEM), and Raman spectroscopy. GO and UA-rGO induced a dose-dependent decrease in cell viability and induced cytotoxicity in human ovarian cancer cells. The results from this study suggest that UA-rGO could cause apoptosis in mammalian cells. The toxicity of UA-rGO is significantly higher than GO. Based on our findings, UA-rGO shows cytotoxic effects against human ovarian cancer cells, and its synthesis is environmentally friendly. UA-rGO significantly inhibits cell viability by increasing lactate dehydrogenase (LDH) release, reactive oxygen species (ROS) generation, activation of caspase-3, and DNA fragmentation. This is the first report to describe the comprehensive effects of UA-rGO in ovarian cancer cells. We believe that the functional aspects of newly synthesized UA-rGO will provide advances towards various biomedical applications in the near future.

A Novel Biomolecule-Mediated Reduction of Graphene Oxide: A Multifunctional Anti-Cancer Agent

Directory of Open Access Journals (Sweden)

Yun-Jung Choi

2016-03-01

Full Text Available Graphene oxide (GO is a monolayer of carbon atoms that form a dense honeycomb structure, consisting of hydroxyl and epoxide functional groups on the two accessible sides and carboxylic groups at the edges. In contrast, graphene is a two-dimensional sheet of sp2-hybridized carbon atoms packed into a honeycomb lattice. Graphene has great potential for use in biomedical applications due to its excellent physical and chemical properties. In this study, we report a facile and environmentally friendly approach for the synthesis of reduced graphene oxide (rGO using uric acid (UA. The synthesized uric acid-reduced graphene oxide (UA-rGO was fully characterized by ultraviolet-visible (UV-Vis absorption spectra, X-ray diffraction (XRD, dynamic light scattering (DLS, Fourier transform infrared (FTIR, scanning electron microscopy (SEM, and Raman spectroscopy. GO and UA-rGO induced a dose-dependent decrease in cell viability and induced cytotoxicity in human ovarian cancer cells. The results from this study suggest that UA-rGO could cause apoptosis in mammalian cells. The toxicity of UA-rGO is significantly higher than GO. Based on our findings, UA-rGO shows cytotoxic effects against human ovarian cancer cells, and its synthesis is environmentally friendly. UA-rGO significantly inhibits cell viability by increasing lactate dehydrogenase (LDH release, reactive oxygen species (ROS generation, activation of caspase-3, and DNA fragmentation. This is the first report to describe the comprehensive effects of UA-rGO in ovarian cancer cells. We believe that the functional aspects of newly synthesized UA-rGO will provide advances towards various biomedical applications in the near future.

Improvement programme of the UA2 detector

International Nuclear Information System (INIS)

Gaillard, J.M.

1985-01-01

The UA2 experiment took its first data in November 1981 and has been operating smoothly since then. After a long shut-down in 1986, the Sp anti pS collider will resume operation with a substantially higher luminosity than presently available. The recently approved Antiproton Collector should allow for a total integrated luminosity of nearly 10 pb -1 by the end of 1989. In order to make the best use of the increased luminosity in terms of physics results the performance of the present UA2 detector has to be simultaneously improved. In this report, discussions are made concerning calorimeter end caps, upgraded vertex detector, as well as end cap tracking and preshower. It is concluded that the new design results from a number of choices dictated by the following considerations: i) The upgraded UA2 must be operational in 1987, as soon as the Collider resumes operation, in order to maximise its physics output during the period when TEV 1, with nearly three times as high a c.m. energy, has not yet taken over leadership. ii) The upgraded UA2 must remain competitive on the major physics issues rather than diversify its detection capabilities. iii) Priority is given to the quality of the missing transverse energy measurement. iv) Modifications to the vertex detector aim at ensuring that multivertex events can be reconstructed and at improving the detector performance in relation with electron identification. (Nogami, K.)

Cooperative Autonomous Observation of Volcanic Environments with sUAS

Science.gov (United States)

Ravela, S.

2015-12-01

The Cooperative Autonomous Observing System Project (CAOS) at the MIT Earth Signals and Systems Group has developed methodology and systems for dynamically mapping coherent fluids such as plumes using small unmanned aircraft systems (sUAS). In the CAOS approach, two classes of sUAS, one remote the other in-situ, implement a dynamic data-driven mapping system by closing the loop between Modeling, Estimation, Sampling, Planning and Control (MESPAC). The continually gathered measurements are assimilated to produce maps/analyses which also guide the sUAS network to adaptively resample the environment. Rather than scan the volume in fixed Eulerian or Lagrangian flight plans, the adaptive nature of the sampling process enables objectives for efficiency and resilience to be incorporated. Modeling includes realtime prediction using two types of reduced models, one based on nowcasting remote observations of plume tracer using scale-cascaded alignment, and another based on dynamically-deformable EOF/POD developed for coherent structures. Ensemble-based Information-theoretic machine learning approaches are used for the highly non-linear/non-Gaussian state/parameter estimation, and for planning. Control of the sUAS is based on model reference control coupled with hierarchical PID. MESPAC is implemented in part on a SkyCandy platform, and implements an airborne mesh that provides instantaneous situational awareness and redundant communication to an operating fleet. SkyCandy is deployed on Itzamna Aero's I9X/W UAS with low-cost sensors, and is currently being used to study the Popocatepetl volcano. Results suggest that operational communities can deploy low-cost sUAS to systematically monitor whilst optimizing for efficiency/maximizing resilience. The CAOS methodology is applicable to many other environments where coherent structures are present in the background. More information can be found at caos.mit.edu.

UAS Integration Into the NAS: An Examination of Baseline Compliance in the Current Airspace System

Science.gov (United States)

Fern, Lisa; Kenny, Caitlin A.; Shively, Robert J.; Johnson, Walter

2012-01-01

As a result of the FAA Modernization and Reform Act of 2012, Unmanned Aerial Systems (UAS) are expected to be integrated into the National Airspace System (NAS) by 2015. Several human factors challenges need to be addressed before UAS can safely and routinely fly in the NAS with manned aircraft. Perhaps the most significant challenge is for the UAS to be non-disruptive to the air traffic management system. Another human factors challenge is how to provide UAS pilots with intuitive traffic information in order to support situation awareness (SA) of their airspace environment as well as a see-and-avoid capability comparable to manned aircraft so that a UAS pilot could safely maneuver the aircraft to maintain separation and collision avoidance if necessary. A simulation experiment was conducted to examine baseline compliance of UAS operations in the current airspace system. Researchers also examined the effects of introducing a Cockpit Situation Display (CSD) into a UAS Ground Control Station (GCS) on UAS pilot performance, workload and situation awareness while flying in a positively controlled sector. Pilots were tasked with conducting a highway patrol police mission with a Medium Altitude Long Endurance (MALE) UAS in L.A. Center airspace with two mission objectives: 1) to reroute the UAS when issued new instructions from their commander, and 2) to communicate with Air Traffic Control (ATC) to negotiate flight plan changes and respond to vectoring and altitude change instructions. Objective aircraft separation data, workload ratings, SA data, and subjective ratings regarding UAS operations in the NAS were collected. Results indicate that UAS pilots were able to comply appropriately with ATC instructions. In addition, the introduction of the CSD improved pilot SA and reduced workload associated with UAS and ATC interactions.

Advancing UAS methods for monitoring coastal environments

Science.gov (United States)

Ridge, J.; Seymour, A.; Rodriguez, A. B.; Dale, J.; Newton, E.; Johnston, D. W.

2017-12-01

Utilizing fixed-wing Unmanned Aircraft Systems (UAS), we are working to improve coastal monitoring by increasing the accuracy, precision, temporal resolution, and spatial coverage of habitat distribution maps. Generally, multirotor aircraft are preferred for precision imaging, but recent advances in fixed-wing technology have greatly increased their capabilities and application for fine-scale (decimeter-centimeter) measurements. Present mapping methods employed by North Carolina coastal managers involve expensive, time consuming and localized observation of coastal environments, which often lack the necessary frequency to make timely management decisions. For example, it has taken several decades to fully map oyster reefs along the NC coast, making it nearly impossible to track trends in oyster reef populations responding to harvesting pressure and water quality degradation. It is difficult for the state to employ manned flights for collecting aerial imagery to monitor intertidal oyster reefs, because flights are usually conducted after seasonal increases in turbidity. In addition, post-storm monitoring of coastal erosion from manned platforms is often conducted days after the event and collects oblique aerial photographs which are difficult to use for accurately measuring change. Here, we describe how fixed wing UAS and standard RGB sensors can be used to rapidly quantify and assess critical coastal habitats (e.g., barrier islands, oyster reefs, etc.), providing for increased temporal frequency to isolate long-term and event-driven (storms, harvesting) impacts. Furthermore, drone-based approaches can accurately image intertidal habitats as well as resolve information such as vegetation density and bathymetry from shallow submerged areas. We obtain UAS imagery of a barrier island and oyster reefs under ideal conditions (low tide, turbidity, and sun angle) to create high resolution (cm scale) maps and digital elevation models to assess habitat condition

UA1 upgrade first-level calorimeter trigger processor

International Nuclear Information System (INIS)

Bains, N.; Charlton, D.; Ellis, N.; Garvey, J.; Gregory, J.; Jimack, M.P.; Jovanovic, P.; Kenyon, I.R.; Baird, S.A.; Campbell, D.; Cawthraw, M.; Coughlan, J.; Flynn, P.; Galagedera, S.; Grayer, G.; Halsall, R.; Shah, T.P.; Stephens, R.; Eisenhandler, E.; Fensome, I.; Landon, M.

1989-01-01

A new first-level trigger processor has been built for the UA1 experiment on the Cern SppS Collider. The processor exploits the fine granularity of the new UA1 uranium-TMP calorimeter to improve the selectivity of the trigger. The new electron trigger has improved hadron jet rejection, achieved by requiring low energy deposition around the electromagnetic cluster. A missing transverse energy trigger and a total energy trigger have also been implemented. (orig.)

At UA6

CERN Multimedia

1983-01-01

UA6 was setup by the CERN-Lausanne-Michigan-Rockfeller Collaboration to sudy inclusive electromagnetic final states and Lambda production in ppbar and pp interactions at 22.5 GeV c.m. The apparatus consisting of a gas-jet target, spectrometer magnet, and associated detectors was installed at the SPS in the missing magnet straight section upstream of LSS5. Louis Dick stands on the left. in the miss

Calibration of UAS imagery inside and outside of shadows for improved vegetation index computation

Science.gov (United States)

Bondi, Elizabeth; Salvaggio, Carl; Montanaro, Matthew; Gerace, Aaron D.

2016-05-01

Vegetation health and vigor can be assessed with data from multi- and hyperspectral airborne and satellite- borne sensors using index products such as the normalized difference vegetation index (NDVI). Recent advances in unmanned aerial systems (UAS) technology have created the opportunity to access these same image data sets in a more cost effective manner with higher temporal and spatial resolution. Another advantage of these systems includes the ability to gather data in almost any weather condition, including complete cloud cover, when data has not been available before from traditional platforms. The ability to collect in these varied conditions, meteorological and temporal, will present researchers and producers with many new challenges. Particularly, cloud shadows and self-shadowing by vegetation must be taken into consideration in imagery collected from UAS platforms to avoid variation in NDVI due to changes in illumination within a single scene, and between collection flights. A workflow is presented to compensate for variations in vegetation indices due to shadows and variation in illumination levels in high resolution imagery collected from UAS platforms. Other calibration methods that producers may currently be utilizing produce NDVI products that still contain shadow boundaries and variations due to illumination, whereas the final NDVI mosaic from this workflow does not.

Preparation of a differentially expressed, full-length cDNA expression library by RecA-mediated triple-strand formation with subtractively enriched cDNA fragments

NARCIS (Netherlands)

Hakvoort, T. B.; Spijkers, J. A.; Vermeulen, J. L.; Lamers, W. H.

1996-01-01

We have developed a fast and general method to obtain an enriched, full-length cDNA expression library with subtractively enriched cDNA fragments. The procedure relies on RecA-mediated triple-helix formation of single-stranded cDNA fragments with a double-stranded cDNA plasmid library. The complexes

Fragment capture device

Science.gov (United States)

Payne, Lloyd R.; Cole, David L.

2010-03-30

A fragment capture device for use in explosive containment. The device comprises an assembly of at least two rows of bars positioned to eliminate line-of-sight trajectories between the generation point of fragments and a surrounding containment vessel or asset. The device comprises an array of at least two rows of bars, wherein each row is staggered with respect to the adjacent row, and wherein a lateral dimension of each bar and a relative position of each bar in combination provides blockage of a straight-line passage of a solid fragment through the adjacent rows of bars, wherein a generation point of the solid fragment is located within a cavity at least partially enclosed by the array of bars.

Round-Trip Delay Estimation in OPC UA Server-Client Communication Channel

OpenAIRE

Nakutis, Zilvinas; Deksnys, Vytautas; Jarusevicius, Ignas; Dambrauskas, Vilius; Cincikas, Gediminas; Kriauceliunas, Alenas

2017-01-01

In this paper an estimation of round-trip delay (RTD) in OPC UA server-client channel was investigated in various data communication networks including Ethernet, WiFi, and 3G. Testing was carried out using the developed IoT gateway device running OPC UA server and remote computer running OPC UA client. The server and the client machines were configured to operate in Virtual Private Network powered by OpenVPN. Experimental analysis revealed that RTD values are distributed in the wide range exh...

Performance Evaluations for Super-Resolution Mosaicing on UAS Surveillance Videos

Directory of Open Access Journals (Sweden)

Aldo Camargo

2013-05-01

Full Text Available Abstract Unmanned Aircraft Systems (UAS have been widely applied for reconnaissance and surveillance by exploiting information collected from the digital imaging payload. The super-resolution (SR mosaicing of low-resolution (LR UAS surveillance video frames has become a critical requirement for UAS video processing and is important for further effective image understanding. In this paper we develop a novel super-resolution framework, which does not require the construction of sparse matrices. The proposed method implements image operations in the spatial domain and applies an iterated back-projection to construct super-resolution mosaics from the overlapping UAS surveillance video frames. The Steepest Descent method, the Conjugate Gradient method and the Levenberg-Marquardt algorithm are used to numerically solve the nonlinear optimization problem for estimating a super-resolution mosaic. A quantitative performance comparison in terms of computation time and visual quality of the super-resolution mosaics through the three numerical techniques is presented.

Water Plume Temperature Measurements by an Unmanned Aerial System (UAS).

Science.gov (United States)

DeMario, Anthony; Lopez, Pete; Plewka, Eli; Wix, Ryan; Xia, Hai; Zamora, Emily; Gessler, Dan; Yalin, Azer P

2017-02-07

We report on the development and testing of a proof of principle water temperature measurement system deployed on an unmanned aerial system (UAS), for field measurements of thermal discharges into water. The primary elements of the system include a quad-copter UAS to which has been integrated, for the first time, both a thermal imaging infrared (IR) camera and an immersible probe that can be dipped below the water surface to obtain vertical water temperature profiles. The IR camera is used to take images of the overall water surface to geo-locate the plume, while the immersible probe provides quantitative temperature depth profiles at specific locations. The full system has been tested including the navigation of the UAS, its ability to safely carry the sensor payload, and the performance of both the IR camera and the temperature probe. Finally, the UAS sensor system was successfully deployed in a pilot field study at a coal burning power plant, and obtained images and temperature profiles of the thermal effluent.

Performance of a UA1 hadron calorimeter prototype

International Nuclear Information System (INIS)

Corden, M.J.; Dowell, J.D.; Edwards, M.; Ellis, N.; Garvey, J.; Grant, D.; Homer, R.J.; Kenyon, I.R.; McMahon, T.; Schanz, G.; Sumorok, K.C.T.O.; Watkins, P.M.; Wilson, J.A.; Eisenhandler, E.; Gibson, W.R.; Kalmus, P.I.P.; Thompson, G.; Arnison, G.; Astbury, A.; Grayer, G.; Haynes, W.J.; Hill, D.; Nandi, A.K.; Roberts, C.; Shah, T.P.

1982-01-01

The hadron calorimeter for the UA1 experiment at the CERN SPS proton-antiproton collider consists of a lead-scintillator sandwich plus an iron-scintillator sandwich with wavelength shifter readout. The authors have tested prototype modules in muon and hadron beams in the momentum range from 0.7 to 90 GeV/c. For several angles of incidence, the authors have studied the uniformity of the response to hadrons as a function of position. This has included regions where there is reduced sensitivity due to mechanical constraints and the presence of the wavelength shifter readout. The response, resolution and degree of shower containment were measured as a function of incident momentum. (Auth.)

Oleanolic acid and ursolic acid inhibit peptidoglycan biosynthesis in Streptococcus mutans UA159

Directory of Open Access Journals (Sweden)

Soon-Nang Park

2015-06-01

Full Text Available In this study, we revealed that OA and UA significantly inhibited the expression of most genes related to peptidoglycan biosynthesis in S. mutans UA159. To the best of our knowledge, this is the first report to introduce the antimicrobial mechanism of OA and UA against S. mutans.

Searching for the top at UA2

International Nuclear Information System (INIS)

Unal, G.

1990-10-01

The projects conceived for searching the quark top, predicted by the Standard Model, are described. The required existence of the quark top from the Standard Model and its production from proton-antiproton collisions are reviewed. The UA2 experimental device is described. The method applied for the search of the top is explained. The analysis of the UA2 data does not allow to conclude the existence of the top. However, the low mass limit of 69 GeV/C 2 can be established for the top mass. The results of the analysis of the W decays into supersymmetric particles are included [fr

Unmanned aircraft systems (UAS) activities at the Department of the Interior

Science.gov (United States)

Quirk, Bruce K.; Hutt, Michael E.

2014-01-01

The U.S. Department of the Interior (DOI) is responsible for protecting and managing the natural resources and heritage on almost 20% of the land in the United States. The DOI’s mission requires access to remotely sensed data over vast lands, including areas that are remote and potentially dangerous to access. Unmanned Aircraft Systems (UAS) technology has the potential to enable the DOI to be a better steward of the land by: (1) Improving natural hazard forecasting and the analysis of the impacts. (2) Improving the understanding of climate change to better plan for likely impacts. (3) Developing precipitation and evaporation forecasting to better manage water resources. (4) Monitoring Arctic ice change and its impacts on ecosystems, coasts, and transportation. (5) Increasing safety and effectiveness of wildland fire management. (6) Enhancing search and rescue capabilities. (7) Broadening the abilities to monitor environmental or landscape conditions and changes. (8) Better understanding and protecting the Nation’s ecosystems. The initial operational testing and evaluations performed by the DOI have proven that UAS technology can be used to support many of the Department’s activities. UAS technology provides scientists a way to look longer, closer and more frequently at some of Earth’s most remote areas—places that were previously too dangerous or expensive to monitor in detail. The flexibility of operations and relative low cost to purchase and operate Small Unmanned Aerial System (sUAS) enhances the ability to track long-term landscape and environmental change. The initial testing indicates the operational costs are approximately 10% of traditional manned aircraft. In addition, users can quickly assess landscape-altering events such as wildland fires, floods and volcanoes. UAS technology will allow the DOI to do more with less and in the process enhance the Department’s ability to provide unbiased scientific information to help stakeholders make

Addendum to the UA9 status report for 2017

CERN Document Server

Scandale, W

2017-01-01

The activity of the UA9 Collaboration from 17 October 2017 onwards is presented hereafter, in view of supplementing the UA9 report for 2017. Two new items are shortly reported: 1) the progress of the so-called “double-crystal experiment”, aiming at the measurement of the electric and magnetic dipole moments (EDM and MDM respectively) of the heavy baryons in LHC and 2) the first double-crystal test in the SPS in view of demonstrating the feasibility of such a sophisticated beam manipulation in more relaxed conditions than in LHC. The new results strongly support the UA9 request of beam time in the SPS and in H8 for 2018 and represent a relevant step towards a sound formulation of a double-crystal experiment in LHC.

HMSRP Unmanned Aerial System (UAS) Data

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Metadata collected during UAS flights for Hawaiian monk seal research purposes. This dataset includes date, time, location, duration, platform type, and other...

At UA5

CERN Document Server

CERN PhotoLab

1980-01-01

One of the two 6 m long streamer chambers for experiment UA5. The absorber plates used for neutrak particle conversion are visible. On the left and right sides of the frame can be seen the fiducial marks and the optical pattern used for adjusting the optics and checking the spatial esolution. The wires on top constitute a calibration grid for spatial reconstruction. See Annual Report 1979 p. 80, Fig. 12, and Annual Report 1980 p. 70, Fig. 6.

Crystallization of DNA fragments from water-salt solutions, containing 2-methylpentane-2,3-diol.

Science.gov (United States)

Osica, V D; Sukharevsky, B Y; Vasilchenko, V N; Verkin, B I; Polyvtsev, O F

1976-09-01

Fragments of calf thymus DNA have been crystallized by precipitation from water-salt solutions, containing 2-methylpentane-2,3-diol (MPD). DNA crystals usually take the form either of spherulites up to 100 mu in diameter or of needles with the length up to 50 mu. No irreversible denaturation of DNA occurs during the crystallization process. X-ray diffraction from dense slurries of DNA crystals yields crystalline powder patterns.

Development of Small UAS Beyond-Visual-Line-of-Sight (BVLOS Flight Operations: System Requirements and Procedures

Directory of Open Access Journals (Sweden)

Scott Xiang Fang

2018-04-01

Full Text Available Due to safety concerns of integrating small unmanned aircraft systems (UAS into non-segregated airspace, aviation authorities have required a set of detect and avoid (DAA systems to be equipped on small UAS for beyond-visual-line-of-sight (BVLOS flight operations in civil airspace. However, the development of small UAS DAA systems also requires BVLOS flights for testing and validation. To mitigate operational risks for small UAS BVLOS flight operations, this paper proposes to initially test small UAS DAA systems in BVLOS flights in a restricted airspace with additional safety features. Later, this paper further discusses the operating procedures and emergency action plans for small UAS BVLOS flight operations. The testing results show that these safety systems developed can help improve operational safety for small UAS BVLOS flight operations.

Water Plume Temperature Measurements by an Unmanned Aerial System (UAS

Directory of Open Access Journals (Sweden)

Anthony DeMario

2017-02-01

Full Text Available We report on the development and testing of a proof of principle water temperature measurement system deployed on an unmanned aerial system (UAS, for field measurements of thermal discharges into water. The primary elements of the system include a quad-copter UAS to which has been integrated, for the first time, both a thermal imaging infrared (IR camera and an immersible probe that can be dipped below the water surface to obtain vertical water temperature profiles. The IR camera is used to take images of the overall water surface to geo-locate the plume, while the immersible probe provides quantitative temperature depth profiles at specific locations. The full system has been tested including the navigation of the UAS, its ability to safely carry the sensor payload, and the performance of both the IR camera and the temperature probe. Finally, the UAS sensor system was successfully deployed in a pilot field study at a coal burning power plant, and obtained images and temperature profiles of the thermal effluent.

sUAS Facility Map - Download dataset

Data.gov (United States)

Department of Transportation — sUAS Facility Maps (UASFM) that indicate “pre-approved fly altitudes.” Within each grid on the map, FAA would identify maximum altitudes at which flight is permitted...

2015 Hawaii SE Island UAS Orthomosaic

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This imagery was captured September 20, 2015 for the Hawaiian Monk Seal Research Program. Unmanned Aircraft Systems (UAS) are being tested to assess their...

The UA9 experimental layout

CERN Document Server

Scandale, W.; Assmann, R.; Bracco, C.; Cerutti, F.; Christiansen, J.; Gilardoni, S.; Laface, E.; Losito, R.; Masi, A.; Metral, E.; Mirarchi, D.; Montesano, S.; Previtali, V.; Redaelli, S.; Valentino, G.; Schoofs, P.; Smirnov, G.; Tlustos, L.; Bagli, E.; Baricordi, S.; Dalpiaz, P.; Guidi, V.; Mazzolari, A.; Vincenzi, D.; Dabagov, S.; Murtas, F.; Carnera, A.; Della Mea, G.; De Salvador, D.; Lombardi, A.; Lytovchenko, O.; Tonezzer, M.; Cavoto, G.; Ludovici, L.; Santacesaria, R.; Valente, P.; Galluccio, F.; Afonin, A.G.; Bulgakov, M.K.; Chesnokov, Yu.A.; Maisheev, V.A.; Yazynin, I.A.; Kovalenko, A.D.; Taratin, A.M.; Gavrikov, Yu.A.; Ivanov, Yu.M.; Lapina, L.P.; Skorobogatov, V.V.; Ferguson, W.; Fulcher, J.; Hall, G.; Pesaresi, M.; Raymond, M.; Rose, A.; Ryan, M.; Zorba, O.; Robert-Demolaize, G.; Markiewicz, T.; Oriunno, M.; Wienands, U.

2011-01-01

The UA9 experimental equipment was installed in the CERN-SPS in March '09 with the aim of investigating crystal assisted collimation in coasting mode. Its basic layout comprises silicon bent crystals acting as primary collimators mounted inside two vacuum vessels. A movable 60 cm long block of tungsten located downstream at about 90 degrees phase advance intercepts the deflected beam. Scintillators, Gas Electron Multiplier chambers and other beam loss monitors measure nuclear loss rates induced by the interaction of the beam halo in the crystal. Roman pots are installed in the path of the deflected particles and are equipped with a Medipix detector to reconstruct the transverse distribution of the impinging beam. Finally UA9 takes advantage of an LHC-collimator prototype installed close to the Roman pot to help in setting the beam conditions and to analyze the efficiency to deflect the beam. This paper describes in details the hardware installed to study the crystal collimation during 2010.

Genetic structure and seed-mediated dispersal rates of an endangered shrub in a fragmented landscape: a case study for Juniperus communis in northwestern Europe

Directory of Open Access Journals (Sweden)

Adriaenssens Sandy

2011-08-01

Full Text Available Abstract Background Population extinction risk in a fragmented landscape is related to the differential ability of the species to spread its genes across the landscape. The impact of landscape fragmentation on plant population dynamics will therefore vary across different spatial scales. We quantified successful seed-mediated dispersal of the dioecious shrub Juniperus communis in a fragmented landscape across northwestern Europe by using amplified fragment length polymorphism (AFLP markers. Furthermore we investigated the genetic diversity and structure on two spatial scales: across northwestern Europe and across Flanders (northern Belgium. We also studied whether seed viability and populations size were correlated with genetic diversity. Results Unexpectedly, estimated seed-mediated dispersal rates were quite high and ranged between 3% and 14%. No population differentiation and no spatial genetic structure were detected on the local, Flemish scale. A significant low to moderate genetic differentiation between populations was detected at the regional, northwest European scale (PhiPT = 0.10. In general, geographically nearby populations were also genetically related. High levels of within-population genetic diversity were detected but no correlation was found between any genetic diversity parameter and population size or seed viability. Conclusions In northwestern Europe, landscape fragmentation has lead to a weak isolation-by-distance pattern but not to genetic impoverishment of common juniper. Substantial rates of successful migration by seed-mediated gene flow indicate a high dispersal ability which could enable Juniperus communis to naturally colonize suitable habitats. However, it is not clear whether the observed levels of migration will suffice to counterbalance the effects of genetic drift in small populations on the long run.

U.S. Geological Survey Unmanned Aircraft Systems (UAS) Roadmap 2014

Science.gov (United States)

Cress, Jill J.; Hutt, Michael E.; Sloan, Jeff L.; Bauer, Mark A.; Feller, Mark R.; Goplen, Susan E.

2015-01-01

The U.S. Department of the Interior (DOI) is responsible for protecting the natural resources and heritage contained on almost 20 percent of the land in the United States. This responsibility requires acquisition of remotely sensed data throughout vast lands, including areas that are remote and potentially dangerous to access. One promising new technology for data collection is unmanned aircraft systems (UAS), which may be better suited (achieving superior science, safety, and savings) than traditional methods. UAS, regardless of their size, have the same operational components: aircraft, payloads, communications unit, and operator control unit. The aircraft is the platform that flies and carries any required payloads. For Department of the Interior missions these payloads will be either a sensor or set of sensors that can acquire the specific type of remotely sensed data that is needed. The aircraft will also carry the payload that is responsible for transmitting live airborne video images, compass headings, and location information to the operator control unit. The communications unit, which transfers information between the aircraft and the operator control unit, consists of the hardware and software required to establish both uplink and downlink communications. Finally, the operator control unit both controls and monitors the aircraft and can be operated either by a pilot on the ground or autonomously.

Command and Control Software for Single-Operator Multiple UAS Missions, Phase II

Data.gov (United States)

National Aeronautics and Space Administration — Existing command and control (C2) paradigms for UAS platforms are extremely limited and cumbersome, requiring at least a single operator per UAS, if not more than...

Command and Control Software for Single-Operator Multiple UAS Missions, Phase I

Data.gov (United States)

National Aeronautics and Space Administration — Existing command and control (C2) paradigms for UAS platforms are extremely limited and cumbersome, requiring at least a single operator per UAS, if not more than...

Poppy Crop Height and Capsule Volume Estimation from a Single UAS Flight

Directory of Open Access Journals (Sweden)

Faheem Iqbal

2017-06-01

Full Text Available The objective of this study was to estimate poppy plant height and capsule volume with remote sensing using an Unmanned Aircraft System (UAS. Data were obtained from field measurements and UAS flights over two poppy crops at Cambridge and Cressy in Tasmania. Imagery acquired from the UAS was used to produce dense point clouds using structure from motion (SfM and multi-view stereopsis (MVS techniques. Dense point clouds were used to generate a digital surface model (DSM and orthophoto mosaic. An RGB index was derived from the orthophoto to extract the bare ground spaces. This bare ground space mask was used to filter the points on the ground, and a digital terrain model (DTM was interpolated from these points. Plant height values were estimated by subtracting the DSM and DTM to generate a Crop Height Model (CHM. UAS-derived plant height (PH and field measured PH in Cambridge were strongly correlated with R2 values ranging from 0.93 to 0.97 for Transect 1 and Transect 2, respectively, while at Cressy results from a single flight provided R2 of 0.97. Therefore, the proposed method can be considered an important step towards crop surface model (CSM generation from a single UAS flight in situations where a bare ground DTM is unavailable. High correlations were found between UAS-derived PH and poppy capsule volume (CV at capsule formation stage (R2 0.74, with relative error of 19.62%. Results illustrate that plant height can be reliably estimated for poppy crops based on a single UAS flight and can be used to predict opium capsule volume at capsule formation stage.

NASA Unmanned Aircraft (UA) Control and Non-Payload Communication (CNPC) System Waveform Trade Studies

Science.gov (United States)

Chavez, Carlos; Hammel, Bruce; Hammel, Allan; Moore, John R.

2014-01-01

Unmanned Aircraft Systems (UAS) represent a new capability that will provide a variety of services in the government (public) and commercial (civil) aviation sectors. The growth of this potential industry has not yet been realized due to the lack of a common understanding of what is required to safely operate UAS in the National Airspace System (NAS). To address this deficiency, NASA has established a project called UAS Integration in the NAS (UAS in the NAS), under the Integrated Systems Research Program (ISRP) of the Aeronautics Research Mission Directorate (ARMD). This project provides an opportunity to transition concepts, technology, algorithms, and knowledge to the Federal Aviation Administration (FAA) and other stakeholders to help them define the requirements, regulations, and issues for routine UAS access to the NAS. The safe, routine, and efficient integration of UAS into the NAS requires new radio frequency (RF) spectrum allocations and a new data communications system which is both secure and scalable with increasing UAS traffic without adversely impacting the Air Traffic Control (ATC) communication system. These data communications, referred to as Control and Non-Payload Communications (CNPC), whose purpose is to exchange information between the unmanned aircraft and the ground control station to ensure safe, reliable, and effective unmanned aircraft flight operation. A Communications Subproject within the UAS in the NAS Project has been established to address issues related to CNPC development, certification and fielding. The focus of the Communications Subproject is on validating and allocating new RF spectrum and data link communications to enable civil UAS integration into the NAS. The goal is to validate secure, robust data links within the allocated frequency spectrum for UAS. A vision, architectural concepts, and seed requirements for the future commercial UAS CNPC system have been developed by RTCA Special Committee 203 (SC-203) in the process

Analysis of the fragmentation properties of quark and gluon jets at the CERN SPS panti p collider

International Nuclear Information System (INIS)

Arnison, G.; Albrow, M.G.; Denby, B.; Flynn, P.; Grayer, G.; Haynes, W.; Roberts, C.; Scott, W.; Shah, T.P.; Allkofer, O.C.; Dau, D.; Leuchs, R.; Levegrun, S.; Astbury, A.; Fincke Keeler, M.; Keeler, R.; Sobie, R.; Zanello, L.; Aubert, B.; Catz, P.; Della Negra, M.; Ghez, P.; Gonidec, A.; Linglin, D.; Minard, M.N.; Mours, B.; Perault, C.; Vialle, J.P.; Wingerter, I.; Yvert, M.; Bacci, C.; Ceradini, F.; Ciapetti, G.; Diaccio, A.; Lacava, F.; Moricca, M.; Paoluzi, L.; Piano Mortari, G.; Salvini, G.; Batley, J.R.; Buckley, E.; Eisenhandler, E.; Gibson, W.R.; Honma, A.; Kalmus, P.I.P.; Kyberd, P.; Nandi, A.; Thompson, G.; Bauer, G.; Geer, S.; Goodman, M.; Rohlf, J.; Sumorok, K.; Centro, S.; Bezaguet, A.; Bock, R.K.; Cennini, P.; Cittolin, S.; Demoulin, M.; Hofmann, H.; Jank, W.; Jorat, G.; Levi, M.; Maurin, G.; Meyer, O.; Meyer, T.; Muller, T.; Naumann, L.; Norton, A.; Pauss, F.; Placci, A.; Porte, J.P.; Rich, J.; Rijssenbeek, M.; Rubbia, C.; Sass, J.; Sadoulet, B.; Schinzel, D.; Vuillemin, V.; Wilke, R.; Wyatt, T.; Leveque, A.; Dorenbosch, J.; Holthuizen, D.J.; Eijk, B. van; Cline, D.; Markiewicz, T.; Mohammadi, M.; Cochet, C.; Debeer, M.; Denegri, D.; Givernaud, A.; Laugier, J.P.; Locci, E.; Savoy-Navarro, A.; Verecchia, P.; Corden, M.; Dowell, J.D.; Edgecock, R.; Ellis, N.; Garvey, J.; Homer, R.J.; Kenyon, I.; McMahon, T.; Streets, J.; Watkins, P.; Wilson, J.; Dallman, D.; Fruehwirth, R.; Markytan, M.; Strauss, J.; Szonczo, F.; Wahl, H.D.; Wulz, C.E.; Dobrzynski, L.; Fontaine, G.; Giraud-Heraud, Y.; Kryn, D.; Martin, T.; Mendiburu, J.P.; Sajot, G.; Tao, C.; Vrana, J.; Eggert, K.; Erhard, P.; Faissner, H.; Hansl-Kozanecka, T.; Radermacher, E.; Redelberger, T.; Reithler, H.; Tscheslog, E.; Frey, R.; Guryn, W.; Kernan, A.; Kozanecki, W.; Morgan, K.; Pitman, D.; Ransdell, J.; Sheer, I.; Smith, D.; Karimaeki, V.; Kinnunen, R.; Pietarinen, E.; Pimiae, M.; Tuominiemi, J.; Revol, J.P.; Calvetti, M.; Dibitonto, D.; Ghesquiere, C.; Giboni, K.L.; Hertzberger, L.O.; Hoffmann, D.; Lees, J.P.; Lehmann, H.; Rossi, P.; Stenzler, M.; Timmer, J.; Colas, J.; Kinnunen, R.

1986-01-01

A sample of two-jet events from the UA1 experiment at the CERN panti p Collider has been used to study the fragmentation of high-energy quark and gluon jets into charged hadrons. Compared with lower-energy jets observed in e + e - and pp collisions, the fragmentation function measured in the present experiment is softer (i.e. peaked to smaller values of z) and the mean internal transverse momentum is larger, mainly because of the effects of the QCD scaling violations. Using our knowledge of the quark and gluon structure functions in the proton, together with the QCD matrix elements, a statistical separation of quark and gluon jets is achieved within the present experiment. The fragmentation function for the gluon jets is found to be softer, and the angular spread of the fragmentation products larger, than is the case for quark jets. (orig.)

Application of Imaging Sensors for UAS Command and Control for Evolving Towards Autonomous Operations of UAS, Phase I

Data.gov (United States)

National Aeronautics and Space Administration — NextGen will undoubtedly include unmanned aircraft systems (UAS) as legislated under the Federal Aviation Administration Modernization and Reform Act of 2012. The...

Examination of Frameworks for Safe Integration of Intelligent Small UAS into the NAS

Science.gov (United States)

Logan, Michael J.

2012-01-01

This paper discusses a proposed framework for the safe integration of small unmanned aerial systems (sUAS) into the National Airspace System (NAS). The paper briefly examines the potential uses of sUAS to build an understanding of the location and frequency of potential future flight operations based on the future applications of the sUAS systems. The paper then examines the types of systems that would be required to meet the application-level demand to determine "classes" of platforms and operations. A framework for categorization of the "intelligence" level of the UAS is postulated for purposes of NAS integration. Finally, constraints on the intelligent systems are postulated to ensure their ease of integration into the NAS.

Accelerating the SCE-UA Global Optimization Method Based on Multi-Core CPU and Many-Core GPU

Directory of Open Access Journals (Sweden)

Guangyuan Kan

2016-01-01

Full Text Available The famous global optimization SCE-UA method, which has been widely used in the field of environmental model parameter calibration, is an effective and robust method. However, the SCE-UA method has a high computational load which prohibits the application of SCE-UA to high dimensional and complex problems. In recent years, the hardware of computer, such as multi-core CPUs and many-core GPUs, improves significantly. These much more powerful new hardware and their software ecosystems provide an opportunity to accelerate the SCE-UA method. In this paper, we proposed two parallel SCE-UA methods and implemented them on Intel multi-core CPU and NVIDIA many-core GPU by OpenMP and CUDA Fortran, respectively. The Griewank benchmark function was adopted in this paper to test and compare the performances of the serial and parallel SCE-UA methods. According to the results of the comparison, some useful advises were given to direct how to properly use the parallel SCE-UA methods.

Primary structure of human alpha 2-macroglobulin. I. Isolation of the 26 CNBr fragments, amino acid sequence of 13 small CNBr fragments, amino acid sequence of methionine-containing peptides, and alignment of all CNBr fragments

DEFF Research Database (Denmark)

Sottrup-Jensen, Lars; Stepanik, T M; Jones, C M

1984-01-01

-775). These fragments account for 603 of the 1451 residues of the subunits of alpha 2-macroglobulin. CB2 contains two glucosamine-based carbohydrate groups attached to Asn-23 and Asn-38, and one internal disulfide bridge connecting Cys-16 with Cys-54. CB6 contains one glucosamine-based carbohydrate group attached...... to Asn-1 and two internal disulfide bridges (Cys-5 bound to Cys-53 and Cys-23 bound to Cys-41, respectively); Cys-32 is bound to Cys-16 in CB8. CB7 contains two glucosamine-based carbohydrate groups attached to Asn-78 and Asn-92, CB8 contains 1 Cys residue (Cys-16), bridged to Cys-32 of CB6. CB11...

Radio Tracking Fish with Small Unmanned Aircraft Systems (sUAS).

Science.gov (United States)

Dahlgren, R. P.; Anderson, K. R.; Hanson, L.; Pinsker, E. A.; Jonsson, J.; Chapman, D. C.; Witten, D. M.; O'Connor, K. A.

2017-12-01

Tracking radio tagged fish by boat or on foot in riverine systems is difficult and time consuming, particularly in large braided island complexes, shallow wetlands, and rocky reaches. Invasive Asian carp are commonly found in these hard to reach areas, but their near-surface feeding behavior makes radio tracking possible. To identify new methods of fish tracking that could same time and money, this study tested the feasibility of tracking Asian carp with Small Unmanned Aerial Systems (sUAS) in areas generally inaccessible to traditional tracking equipment. The U.S. Geological Survey worked with NanoElectromagnetics LLC and WWR Development to create and integrate a lightweight custom radio receiver, directional antenna, and accompanying software into a sUAS platform. The receiver includes independent GPS, software defined radio, and compass. The NASA Ames Research Center (ARC) completed payload integration, electromagnetic-interference and airworthiness testing, and provided a DJI Matrice 600 sUAS for this study. Additionally, ARC provided subject matter experts, airworthiness and flight readiness evaluation, and flight test facilities during preparation; and a pilot, range safety officer, and aircraft engineer during field deployment. Results demonstrate that this custom sUAS and sensor combination can detect radio tags at 100m above ground level and at horizontal ranges of 100m and 300m, with operators in either onshore or offshore locations. With this combination of sUAS and radio receiver, fish can be tracked in areas previously inaccessible and during flooding, providing new insights into riverine fish movement and habitat utilization.

ASPECTS OF DEM GENERATION FROM UAS IMAGERY

Directory of Open Access Journals (Sweden)

A. Greiwe

2013-08-01

Full Text Available Since a few years, micro UAS (unmanned aerial systems with vertical take off and landing capabilities like quadro- or octocopter are used as sensor platform for Aerophotogrammetry. Since the restricted payload of micro UAS with a total weight up of 5 kg (payload only up to 1.5 kg, these systems are often equipped with small format cameras. These cameras can be classified as amateur cameras and it is often the case, that these systems do not meet the requirements of a geometric stable camera for photogrammetric measurement purposes. However, once equipped with a suitable camera system, an UAS is an interesting alternative to expensive manned flights for small areas. The operating flight height of the above described UAS is about 50 up to 150 meters above ground level. This low flight height lead on the one hand to a very high spatial resolution of the aerial imagery. Depending on the cameras focal length and the sensor's pixel size, the ground sampling distance (GSD is usually about 1 up to 5 cm. This high resolution is useful especially for the automatic generation of homologous tie-points, which are a precondition for the image alignment (bundle block adjustment. On the other hand, the image scale depends on the object's height and the UAV operating height. Objects like mine heaps or construction sites show high variations of the object's height. As a result, operating the UAS with a constant flying height will lead to high variations in the image scale. For some processing approaches this will lead to problems e.g. the automatic tie-point generation in stereo image pairs. As precondition to all DEM generating approaches, first of all a geometric stable camera, sharp images are essentially. Well known calibration parameters are necessary for the bundle adjustment, to control the exterior orientations. It can be shown, that a simultaneous on site camera calibration may lead to misaligned aerial images. Also, the success rate of an automatic tie

Safety and Certification Considerations for Expanding the Use of UAS in Precision Agriculture

Science.gov (United States)

Hayhurst, Kelly J.; Maddalon, Jeffrey M.; Neogi, Natasha A.; Vertstynen, Harry A.

2016-01-01

The agricultural community is actively engaged in adopting new technologies such as unmanned aircraft systems (UAS) to help assess the condition of crops and develop appropriate treatment plans. In the United States, agricultural use of UAS has largely been limited to small UAS, generally weighing less than 55 lb and operating within the line of sight of a remote pilot. A variety of small UAS are being used to monitor and map crops, while only a few are being used to apply agricultural inputs based on the results of remote sensing. Larger UAS with substantial payload capacity could provide an option for site-specific application of agricultural inputs in a timely fashion, without substantive damage to the crops or soil. A recent study by the National Aeronautics and Space Administration (NASA) investigated certification requirements needed to enable the use of larger UAS to support the precision agriculture industry. This paper provides a brief introduction to aircraft certification relevant to agricultural UAS, an overview of and results from the NASA study, and a discussion of how those results might affect the precision agriculture community. Specific topics of interest include business model considerations for unmanned aerial applicators and a comparison with current means of variable rate application. The intent of the paper is to inform the precision agriculture community of evolving technologies that will enable broader use of unmanned vehicles to reduce costs, reduce environmental impacts, and enhance yield, especially for specialty crops that are grown on small to medium size farms.

Sulphur-containing compounds in the essential oil of Ferula alliacea roots and their mass spectral fragmentation patterns.

Science.gov (United States)

Kasaian, Jamal; Asili, Javad; Iranshahi, Mehrdad

2016-10-01

Context GC-MS analysis is the best way to characterize volatile sulphur-containing compounds. Ferula (Apiaceae) is a genus of perennial herbs. Due to the occurrence of essential oils or oleoresins in the Ferula species, these plants usually possess strong aromatic scent. Terpenoid compounds were the most abundant constituents of Ferula oils, however, in some of Ferula species, the essential oils were dominated by volatile sulphur-containing compounds. Objectives Ferula alliacea Boiss. is considered one of the sources of the oleo-gum-resin asafoetida. In this study, we analyzed the hydrodistilled essential oil from its dried roots and provide new data about retention indices and mass fragmentation patterns of some volatile sulphur-containing compounds that are useful for future studies on this class of compounds. Materials and methods The roots of F. alliacea were collected during the flowering stage of plant, from Bezgh, Kashmar to Neishabour road, Khorasan-Razavi province, Iran, in June 2012. The oil was obtained by hydrodistillation using a Clevenger apparatus and analyzed by GC-MS. Results This is the first report on phytochemical analysis of F. alliacea roots. Seventy-six components, representing 99.5% of the oil, were characterized. The major components were 10-epi-γ-eudesmol (22.3%), valerianol (12.5%), hinesol (8.3%), guaiol (7.3%) and Z-propenyl-sec-butyl trisulphide (6.5%). Predominant mass fragment ions of the identified sulphur-containing compounds are explained in this paper. Conclusion The volatile oil of F. alliacea mostly contains oxygenated sesquiterpenes, however, its odour was dominated by sulphur-containing compounds. The most abundant sulphur-containing compound includes Z-propenyl-sec-butyl trisulphide (6.5%).

Unmanned Aircraft Systems (UAS) Integration in the National Airspace System (NAS) Project KDP-C Review

Science.gov (United States)

Grindle, Laurie; Sakahara, Robert; Hackenberg, Davis; Johnson, William

2017-01-01

The topics discussed are the UAS-NAS project life-cycle and ARMD thrust flow down, as well as the UAS environments and how we operate in those environments. NASA's Armstrong Flight Research Center at Edwards, CA, is leading a project designed to help integrate unmanned air vehicles into the world around us. The Unmanned Aircraft Systems Integration in the National Airspace System project, or UAS in the NAS, will contribute capabilities designed to reduce technical barriers related to safety and operational challenges associated with enabling routine UAS access to the NAS. The project falls under the Integrated Systems Research Program office managed at NASA Headquarters by the agency's Aeronautics Research Mission Directorate. NASA's four aeronautics research centers - Armstrong, Ames Research Center, Langley Research Center, and Glenn Research Center - are part of the technology development project. With the use and diversity of unmanned aircraft growing rapidly, new uses for these vehicles are constantly being considered. Unmanned aircraft promise new ways of increasing efficiency, reducing costs, enhancing safety and saving lives 460265main_ED10-0132-16_full.jpg Unmanned aircraft systems such as NASA's Global Hawks (above) and Predator B named Ikhana (below), along with numerous other unmanned aircraft systems large and small, are the prime focus of the UAS in the NAS effort to integrate them into the national airspace. Credits: NASA Photos 710580main_ED07-0243-37_full.jpg The UAS in the NAS project envisions performance-based routine access to all segments of the national airspace for all unmanned aircraft system classes, once all safety-related and technical barriers are overcome. The project will provide critical data to such key stakeholders and customers as the Federal Aviation Administration and RTCA Special Committee 203 (formerly the Radio Technical Commission for Aeronautics) by conducting integrated, relevant system-level tests to adequately address

Soil Moisture Mapping sUAS, Phase II

Data.gov (United States)

National Aeronautics and Space Administration — Black Swift Technologies proposes the continued development, testing, validation, and delivery of the SuperSwift small Unmanned Aircraft System (sUAS), with a highly...

NASA UAS Integration into the NAS Project: Human Systems Integration

Science.gov (United States)

Shively, Jay

2016-01-01

This presentation provides an overview of the work the Human Systems Integration (HSI) sub-project has done on detect and avoid (DAA) displays while working on the UAS (Unmanned Aircraft System) Integration into the NAS project. The most recent simulation on DAA interoperability with Traffic Collision Avoidance System (TCAS) is discussed in the most detail. The relationship of the work to the larger UAS community and next steps are also detailed.

UA1 experience with 3081/E systems

International Nuclear Information System (INIS)

Sphicas, P.A.

1987-01-01

A Harvard/MIT collaboration has built, with support from CERN, a 3081/E farm of two processors in Cambridge, MA. The farm was completed in the beginning of 1986. It has since been used for UA1 data analysis and two full production runs have been completed so far. The system will be upgraded in the near future: the number of 3081/E's will be increased to five, and a new IBM-VME interface developed at CERN will be installed. Similar farms have either already been built (CERN, 5 emulators) or have received approval (ROME, 2 emulators). They will also be used for production and analysis of UA1 data. An overview of the status, performance and future of these systems will be given. (orig.)

Dust on UA1 central detector

CERN Document Server

1982-01-01

In March 1982 the central derector of UA1 was contaminated by dirt in the compressed air used for cooling during the bakeout of the beam pipe. The lengthy cleaning imposed a change of the collider schedule (Annual Report 1982 p. 114).

Testing a small UAS for mapping artisanal diamond mining sites in Africa

Science.gov (United States)

Malpeli, Katherine C.; Chirico, Peter G.

2015-01-01

Remote sensing technology is advancing at an unprecedented rate. At the forefront of the new technological developments are unmanned aircraft systems (UAS). The advent of small, lightweight, low-cost, and user-friendly UAS is greatly expanding the potential applications of remote sensing technology and improving the set of tools available to researchers seeking to map and monitor terrain from above. In this article, we explore the applications of a small UAS for mapping informal diamond mining sites in Africa. We found that this technology provides aerial imagery of unparalleled resolution in a data-sparse, difficult to access, and remote terrain.

BLM Unmanned Aircraft Systems (UAS) Resource Management Operations

Science.gov (United States)

Hatfield, M. C.; Breen, A. L.; Thurau, R.

2016-12-01

The Department of the Interior Bureau of Land Management is funding research at the University of Alaska Fairbanks to study Unmanned Aircraft Systems (UAS) Resource Management Operations. In August 2015, the team conducted flight research at UAF's Toolik Field Station (TFS). The purpose was to determine the most efficient use of small UAS to collect low-altitude airborne digital stereo images, process the stereo imagery into close-range photogrammetry products, and integrate derived imagery products into the BLM's National Assessment, Inventory and Monitoring (AIM) Strategy. The AIM Strategy assists managers in answering questions of land resources at all organizational levels and develop management policy at regional and national levels. In Alaska, the BLM began to implement its AIM strategy in the National Petroleum Reserve-Alaska (NPR-A) in 2012. The primary goals of AIM-monitoring at the NPR-A are to implement an ecological baseline to monitor ecological trends, and to develop a monitoring network to understand the efficacy of management decisions. The long-term AIM strategy also complements other ongoing NPR-A monitoring processes, collects multi-use and multi-temporal data, and supports understanding of ecosystem management strategies in order to implement defensible natural resource management policy. The campaign measured vegetation types found in the NPR-A, using UAF's TFS location as a convenient proxy. The vehicle selected was the ACUASI Ptarmigan, a small hexacopter (based on DJI S800 airframe and 3DR autopilot) capable of carrying a 1.5 kg payload for 15 min for close-range environmental monitoring missions. The payload was a stereo camera system consisting of Sony NEX7's with various lens configurations (16/20/24/35 mm). A total of 77 flights were conducted over a 4 ½ day period, with 1.5 TB of data collected. Mission variables included camera height, UAS speed, transect overlaps, and camera lenses/settings. Invaluable knowledge was gained as to

UAS Integration in the NAS: Detect and Avoid

Science.gov (United States)

Shively, Jay

2018-01-01

This presentation will cover the structure of the unmanned aircraft systems (UAS) integration into the national airspace system (NAS) project (UAS-NAS Project). The talk also details the motivation of the project to help develop standards for a detect-and-avoid (DAA) system, which is required in order to comply with requirements in manned aviation to see-and-avoid other traffic so as to maintain well clear. The presentation covers accomplishments reached by the project in Phase 1 of the research, and touches on the work to be done in Phase 2. The discussion ends with examples of the display work developed as a result of the Phase 1 research.

Auto-Mapping and Configuration Method of IEC 61850 Information Model Based on OPC UA

Directory of Open Access Journals (Sweden)

In-Jae Shin

2016-11-01

Full Text Available The open-platform communication (OPC unified architecture (UA (IEC62541 is introduced as a key technology for realizing a variety of smart grid (SG use cases enabling relevant automation and control tasks. The OPC UA can expand interoperability between power systems. The top-level SG management platform needs independent middleware to transparently manage the power information technology (IT systems, including the IEC 61850. To expand interoperability between the power system for a large number of stakeholders and various standards, this paper focuses on the IEC 61850 for the digital substation. In this paper, we propose the interconnection method to integrate communication with OPC UA and convert OPC UA AddressSpace using system configuration description language (SCL of IEC 61850. We implemented the mapping process for the verification of the interconnection method. The interconnection method in this paper can expand interoperability between power systems for OPC UA integration for various data structures in the smart grid.

Soil Moisture Mapping sUAS, Phase I

Data.gov (United States)

National Aeronautics and Space Administration — The overall technical goal of this SBIR is the development of a commercially viable, small Unmanned Aircraft System (sUAS) with a passive microwave sensor to enable...

Evaluation of the Trade Space Between UAS Maneuver Performance and SAA System Performance Requirements

Science.gov (United States)

Jack, Devin P.; Hoffler, Keith D.; Johnson, Sally C.

2014-01-01

A need exists to safely integrate Unmanned Aircraft Systems (UAS) into the National Airspace System. Replacing manned aircraft's see-and-avoid capability in the absence of an onboard pilot is one of the key challenges associated with safe integration. Sense-and-avoid (SAA) systems will have to achieve yet-to-be-determined required separation distances for a wide range of encounters. They will also need to account for the maneuver performance of the UAS they are paired with. The work described in this paper is aimed at developing an understanding of the trade space between UAS maneuver performance and SAA system performance requirements. An assessment of current manned and unmanned aircraft performance was used to establish potential UAS performance test matrix bounds. Then, nearterm UAS integration work was used to narrow down the scope. A simulator was developed with sufficient fidelity to assess SAA system performance requirements for a wide range of encounters. The simulator generates closest-point-of-approach (CPA) data from the wide range of UAS performance models maneuvering against a single intruder with various encounter geometries. The simulator is described herein and has both a graphical user interface and batch interface to support detailed analysis of individual UAS encounters and macro analysis of a very large set of UAS and encounter models, respectively. Results from the simulator using approximate performance data from a well-known manned aircraft is presented to provide insight into the problem and as verification and validation of the simulator. Analysis of climb, descent, and level turn maneuvers to avoid a collision is presented. Noting the diversity of backgrounds in the UAS community, a description of the UAS aerodynamic and propulsive design and performance parameters is included. Initial attempts to model the results made it clear that developing maneuver performance groups is required. Discussion of the performance groups developed and how

Assessment of Antarctic moss health from multi-sensor UAS imagery with Random Forest Modelling

Science.gov (United States)

Turner, Darren; Lucieer, Arko; Malenovský, Zbyněk; King, Diana; Robinson, Sharon A.

2018-06-01

Moss beds are one of very few terrestrial vegetation types that can be found on the Antarctic continent and as such mapping their extent and monitoring their health is important to environmental managers. Across Antarctica, moss beds are experiencing changes in health as their environment changes. As Antarctic moss beds are spatially fragmented with relatively small extent they require very high resolution remotely sensed imagery to monitor their distribution and dynamics. This study demonstrates that multi-sensor imagery collected by an Unmanned Aircraft System (UAS) provides a novel data source for assessment of moss health. In this study, we train a Random Forest Regression Model (RFM) with long-term field quadrats at a study site in the Windmill Islands, East Antarctica and apply it to UAS RGB and 6-band multispectral imagery, derived vegetation indices, 3D topographic data, and thermal imagery to predict moss health. Our results suggest that moss health, expressed as a percentage between 0 and 100% healthy, can be estimated with a root mean squared error (RMSE) between 7 and 12%. The RFM also quantifies the importance of input variables for moss health estimation showing the multispectral sensor data was important for accurate health prediction, such information being essential for planning future field investigations. The RFM was applied to the entire moss bed, providing an extrapolation of the health assessment across a larger spatial area. With further validation the resulting maps could be used for change detection of moss health across multiple sites and seasons.

Evaluation of Unmanned Aircraft System (UAS) to Monitor Forest Health Conditions in Alaska

Science.gov (United States)

Webley, P. W.; Hatfield, M. C.; Heutte, T. M.; Winton, L. M.

2017-12-01

US Forest Service Alaska Region Forest Health Protection (FHP) and University of Alaska Fairbanks (UAF), Alaska Center for Unmanned Aircraft Systems Integration (ACUASI) are evaluating the capability of Unmanned Aerial Systems (UAS, "drone" informally) to monitor forest health conditions in Alaska's Interior Region. On July 17-20 2017, FHP and ACUASI deployed two different UAS at permanent forest inventory plots managed by the UAF programs Bonanza Creek Long Term Ecological Research (LTER) and Cooperative Alaska Forest Inventory (CAFI). The purpose of the mission was to explore capabilities of UAS for evaluating aspen tree mortality at inaccessible locations and at a scale and precision not generally achievable with currently used ground- or air-based methods. Drawing from experience gained during the initial 2016 campaign, this year emphasized the efficient use of UAS to accomplish practical field research in a variety of realistic situations. The vehicles selected for this years' effort included the DJI Matrice quadcopter with the Zenmuse-X3 camera to quickly capture initial video of the site and tree conditions; followed by the ING Responder (single rotor electric helicopter based on the Gaui X7 airframe) outfitted with a Nikon D810 camera to collect high-resolution stills suitable for construction of orthomosaic models. A total of 12 flights were conducted over the campaign, with two full days dedicated to the Delta Junction Gerstle River Intermediate (GRI) sites and the remaining day at the Bonanza Creek site. In addition to demonstrating the ability of UAS to operate safely and effectively in various canopy conditions, the effort also validated the ability of teams to deliver UAS and scientific payloads into challenging terrain using all-terrain vehicles (ATV) and foot traffic. Analysis of data from the campaign is underway. Because the permanent plots have been recently evaluated it is known that nearly all aspen mortality is caused by an aggressive canker

Zinc Mediated Tandem Fragmentation-Allylation of Methyl 5-Iodopentofuranosides

DEFF Research Database (Denmark)

Hyldtoft, Lene; Madsen, Robert

1999-01-01

In the presence of zinc and allyl bromide methyl 5-iodopentofuranosides undergo a tandem fragmentation alkylation to give functionalized dienes. These can undergo ring-closing olefin metathesis to produce cyclohexenes which on dihydroxylation give quercitols.......In the presence of zinc and allyl bromide methyl 5-iodopentofuranosides undergo a tandem fragmentation alkylation to give functionalized dienes. These can undergo ring-closing olefin metathesis to produce cyclohexenes which on dihydroxylation give quercitols....

Using Small UAS for Mission Simulation, Science Validation, and Definition

Science.gov (United States)

Abakians, H.; Donnellan, A.; Chapman, B. D.; Williford, K. H.; Francis, R.; Ehlmann, B. L.; Smith, A. T.

2017-12-01

Small Unmanned Aerial Systems (sUAS) are increasingly being used across JPL and NASA for science data collection, mission simulation, and mission validation. They can also be used as proof of concept for development of autonomous capabilities for Earth and planetary exploration. sUAS are useful for reconstruction of topography and imagery for a variety of applications ranging from fault zone morphology, Mars analog studies, geologic mapping, photometry, and estimation of vegetation structure. Imagery, particularly multispectral imagery can be used for identifying materials such as fault lithology or vegetation type. Reflectance maps can be produced for wetland or other studies. Topography and imagery observations are useful in radar studies such as from UAVSAR or the future NISAR mission to validate 3D motions and to provide imagery in areas of disruption where the radar measurements decorrelate. Small UAS are inexpensive to operate, reconfigurable, and agile, making them a powerful platform for validating mission science measurements, and also for providing surrogate data for existing or future missions.

NextGen UAS Research, Development and Demonstration Roadmap. Version 1.0

Science.gov (United States)

2012-03-15

18. NUMBER OF PAGES 80 19a. NAME OF RESPONSIBLE PERSON a. REPORT unclassified b. ABSTRACT unclassified c. THIS PAGE unclassified Standard ...individual COA, UAS may operate under both Visual Flight Rules (VFR) and Instrument Flight Rules ( IFR ), in both special use airspace and non- segregated...National Aeronautics Research and Development Plan,” February 2010 , which cites the importance of integrating UAS into the NextGen NAS and establishes

Collision-avoidance radar for small UAS, Phase II

Data.gov (United States)

National Aeronautics and Space Administration — In the near future unmanned aircraft systems (UAS) will be utilized for many societal and commercial applications. However, the hurdle of operation safety in the...

Collision-avoidance radar for small UAS, Phase I

Data.gov (United States)

National Aeronautics and Space Administration — In the near future unmanned aircraft systems (UAS) will be utilized for many societal and commercial applications. However, the hurdle of operation safety in the...

A heterogeneous computing accelerated SCE-UA global optimization method using OpenMP, OpenCL, CUDA, and OpenACC.

Science.gov (United States)

Kan, Guangyuan; He, Xiaoyan; Ding, Liuqian; Li, Jiren; Liang, Ke; Hong, Yang

2017-10-01

The shuffled complex evolution optimization developed at the University of Arizona (SCE-UA) has been successfully applied in various kinds of scientific and engineering optimization applications, such as hydrological model parameter calibration, for many years. The algorithm possesses good global optimality, convergence stability and robustness. However, benchmark and real-world applications reveal the poor computational efficiency of the SCE-UA. This research aims at the parallelization and acceleration of the SCE-UA method based on powerful heterogeneous computing technology. The parallel SCE-UA is implemented on Intel Xeon multi-core CPU (by using OpenMP and OpenCL) and NVIDIA Tesla many-core GPU (by using OpenCL, CUDA, and OpenACC). The serial and parallel SCE-UA were tested based on the Griewank benchmark function. Comparison results indicate the parallel SCE-UA significantly improves computational efficiency compared to the original serial version. The OpenCL implementation obtains the best overall acceleration results however, with the most complex source code. The parallel SCE-UA has bright prospects to be applied in real-world applications.

Data of evolutionary structure change: 1C5UA-2OQUA [Confc[Archive

Lifescience Database Archive (English)

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Real-Time Risk Assessment Framework for Unmanned Aircraft System (UAS) Traffic Management (UTM)

Science.gov (United States)

Ancel, Ersin; Capristan, Francisco M.; Foster, John V.; Condotta, Ryan

2017-01-01

The new Federal Aviation Administration (FAA) Small Unmanned Aircraft rule (Part 107) marks the first national regulations for commercial operation of small unmanned aircraft systems (sUAS) under 55 pounds within the National Airspace System (NAS). Although sUAS flights may not be performed beyond visual line-of-sight or over non- participant structures and people, safety of sUAS operations must still be maintained and tracked at all times. Moreover, future safety-critical operation of sUAS (e.g., for package delivery) are already being conceived and tested. NASA's Unmanned Aircraft System Trac Management (UTM) concept aims to facilitate the safe use of low-altitude airspace for sUAS operations. This paper introduces the UTM Risk Assessment Framework (URAF) which was developed to provide real-time safety evaluation and tracking capability within the UTM concept. The URAF uses Bayesian Belief Networks (BBNs) to propagate off -nominal condition probabilities based on real-time component failure indicators. This information is then used to assess the risk to people on the ground by calculating the potential impact area and the effects of the impact. The visual representation of the expected area of impact and the nominal risk level can assist operators and controllers with dynamic trajectory planning and execution. The URAF was applied to a case study to illustrate the concept.

UAS Integration in the NAS Project: Integrated Test and Evaluation (IT&E) Flight Test 3. Revision E

Science.gov (United States)

Marston, Michael

2015-01-01

The desire and ability to fly Unmanned Aircraft Systems (UAS) in the National Airspace System (NAS) is of increasing urgency. The application of unmanned aircraft to perform national security, defense, scientific, and emergency management are driving the critical need for less restrictive access by UAS to the NAS. UAS represent a new capability that will provide a variety of services in the government (public) and commercial (civil) aviation sectors. The growth of this potential industry has not yet been realized due to the lack of a common understanding of what is required to safely operate UAS in the NAS. NASA's UAS Integration into the NAS Project is conducting research in the areas of Separation Assurance/Sense and Avoid Interoperability, Human Systems Integration (HSI), and Communication to support reducing the barriers of UAS access to the NAS. This research is broken into two research themes namely, UAS Integration and Test Infrastructure. UAS Integration focuses on airspace integration procedures and performance standards to enable UAS integration in the air transportation system, covering Sense and Avoid (SAA) performance standards, command and control performance standards, and human systems integration. The focus of Test Infrastructure is to enable development and validation of airspace integration procedures and performance standards, including the integrated test and evaluation. In support of the integrated test and evaluation efforts, the Project will develop an adaptable, scalable, and schedulable relevant test environment capable of evaluating concepts and technologies for unmanned aircraft systems to safely operate in the NAS. To accomplish this task, the Project will conduct a series of Human-in-the-Loop and Flight Test activities that integrate key concepts, technologies and/or procedures in a relevant air traffic environment. Each of the integrated events will build on the technical achievements, fidelity and complexity of the previous tests and

A 17-kDa Fragment of Lactoferrin Associates With the Termination of Inflammation and Peptides Within Promote Resolution

Directory of Open Access Journals (Sweden)

Aviv Lutaty

2018-03-01

Full Text Available During the resolution of inflammation, macrophages engulf apoptotic polymorphonuclear cells (PMN and can accumulate large numbers of their corpses. Here, we report that resolution phase macrophages acquire the neutrophil-derived glycoprotein lactoferrin (Lf and fragments thereof in vivo and ex vivo. During the onset and resolving phases of inflammation in murine peritonitis and bovine mastitis, Lf fragments of 15 and 17 kDa occurred in various body fluids, and the murine fragmentation, accumulation, and release were mediated initially by neutrophils and later by efferocytic macrophages. The 17-kDa fragment contained two bioactive tripeptides, FKD and FKE that promoted resolution phase macrophage conversion to a pro-resolving phenotype. This resulted in a reduction in peritoneal macrophage numbers and an increase in the CD11blow subset of these cells. Moreover, FKE, but not FKD, peptides enhanced efferocytosis of apoptotic PMN, reduced TNFα and interleukin (IL-6, and increased IL-10 secretion by lipopolysaccharide-stimulated macrophages ex vivo. In addition, FKE promoted neutrophil-mediated resolution at high concentrations (100 µM by enhancing the formation of cytokine-scavenging aggregated NETs (tophi at a low cellular density. Thus, PMN Lf is processed, acquired, and “recycled” by neutrophils and macrophages during inflammation resolution to generate fragments and peptides with paramount pro-resolving activities.

UAS applications in high alpine, snow-covered terrain

Science.gov (United States)

Bühler, Y.; Stoffel, A.; Ginzler, C.

2017-12-01

Access to snow-covered, alpine terrain is often difficult and dangerous. Hence parameters such as snow depth or snow avalanche release and deposition zones are hard to map in situ with adequate spatial and temporal resolution and with spatial continuous coverage. These parameters are currently operationally measured at automated weather stations and by observer networks. However such isolated point measurements are not able to capture the information spatial continuous and to describe the high spatial variability present in complex mountain topography. Unmanned Aerial Systems (UAS) have the potential to fill this gap by frequently covering selected high alpine areas with high spatial resolution down to ground resolutions of even few millimeters. At the WSL Institute for Snow and Avalanche Research SLF we test different photogrammetric UAS with visual and near infrared bands. During the last three years we were able to gather experience in more than 100 flight missions in extreme terrain. By processing the imagery applying state-of-the-art structure from motion (SfM) software, we were able to accurately document several avalanche events and to photogrammetrically map snow depth with accuracies from 1 to 20 cm (dependent on the flight height above ground) compare to manual snow probe measurements. This was even possible on homogenous snow surfaces with very little texture. A key issue in alpine terrain is flight planning. We need to cover regions at high elevations with large altitude differences (up to 1 km) with high wind speeds (up to 20 m/s) and cold temperatures (down to - 25°C). Only a few UAS are able to cope with these environmental conditions. We will give an overview on our applications of UAS in high alpine terrain that demonstrate the big potential of such systems to acquire frequent, accurate and high spatial resolution geodata in high alpine, snow covered terrain that could be essential to answer longstanding questions in avalanche and snow hydrology

Technologically Enhanced Language Learning and Instruction: Подорожі.UA: Beginners’ Ukrainian

Directory of Open Access Journals (Sweden)

Olena Sivachenko

2017-03-01

Full Text Available This article reports on the development of a new blended-learning model for beginners’ Ukrainian language learning and instruction, an innovative approach in foreign language education. This model is a combination of face-to-face and online learning and is a response to new realities in education, and language learning in particular, in our fast-paced, technologically enhanced everyday life. The authors focuses on the design of their new blended-learning textbook Подорожі.UA (Travels.UA, which contains a considerable online component, closely interconnected with in-class, or face-to-face, learning and teaching materials. They discuss their approach to the pedagogical design of this new model, used in the textbook, and also address piloting challenges. The study concludes with a report on the overall success of this project and invites others who teach Ukrainian at postsecondary levels to pilot the project in their institutions.

Co-ordinate control of synthesis of mitochondrial and non-mitochondrial hemoproteins: a binding site for the HAP1 (CYP1) protein in the UAS region of the yeast catalase T gene (CTT1).

Science.gov (United States)

Winkler, H; Adam, G; Mattes, E; Schanz, M; Hartig, A; Ruis, H

1988-01-01

Control of expression of the Saccharomyces cerevisiae CTT1 (catalase T) gene by the HAP1 (CYP1) gene, a mediator of heme control of mitochondrial cytochromes, was studied. Expression of a CTT1-lacZ fusion in a hap1 mutant showed that the CTT1 promoter is under HAP1 control. As demonstrated by a gel retardation assay, the HAP1 protein binds to a heme control region of the CTT1 gene. This binding in vitro is stimulated by hemin. The HAP1-binding sequence was localized by using DNA fragments spanning different regions, by DNase I footprinting and by methylation interference of DNA-protein binding. The binding site was compared to the HAP1-binding sequences previously characterized in detail (UAS1CYC1, UASCYC7). There is strikingly little similarity between the three sequences, which have only four of those 23 bp in common which are protected from DNase I digestion. However, the pattern of major and minor groove contacts in the complex is quite similar in all three cases. The results obtained show that there is true co-ordinate control of expression of mitochondrial cytochromes and at least some extra-mitochondrial hemoproteins. Heme acts as a metabolic signal in this coordination, which is mediated by the HAP1 protein. Images PMID:2844525

DHS S&T First Responders Group and NATO Counter UAS Proposal Interest Response.

Energy Technology Data Exchange (ETDEWEB)

Salton, Jonathan R. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

2018-01-17

The capability, speed, size, and widespread availability of small unmanned aerial systems (sUAS) makes them a serious security concern. The enabling technologies for sUAS are rapidly evolving and so too are the threats they pose to national security. Potential threat vehicles have a small cross-section, and are difficult to reliably detect using purely ground-based systems (e.g. radar or electro-optical) and challenging to target using conventional anti-aircraft defenses. Ground-based sensors are static and suffer from interference with the earth, vegetation and other man-made structures which obscure objects at low altitudes. Because of these challenges, sUAS pose a unique and rapidly evolving threat to national security.

Data of evolutionary structure change: 1A4UA-1XU7B [Confc[Archive

Lifescience Database Archive (English)

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Wind Tunnel and Hover Performance Test Results for Multicopter UAS Vehicles

Science.gov (United States)

Russell, Carl R.; Jung, Jaewoo; Willink, Gina; Glasner, Brett

2016-01-01

There is currently a lack of published data for the performance of multicopter unmanned aircraft system (UAS) vehicles, such as quadcopters and octocopters, often referred to collectively as drones. With the rapidly increasing popularity of multicopter UAS, there is interest in better characterizing the performance of this type of aircraft. By studying the performance of currently available vehicles, it will be possible to develop models for vehicles at this scale that can accurately predict performance and model trajectories. This paper describes a wind tunnel test that was recently performed in the U.S. Army's 7- by 10-ft Wind Tunnel at NASA Ames Research Center. During this wind tunnel entry, five multicopter UAS vehicles were tested to determine forces and moments as well as electrical power as a function of wind speed, rotor speed, and vehicle attitude. The test is described here in detail, and a selection of the key results from the test is presented.

Concepts of Integration for UAS Operations in the NAS

Science.gov (United States)

Consiglio, Maria C.; Chamberlain, James P.; Munoz, Cesar A.; Hoffler, Keith D.

2012-01-01

One of the major challenges facing the integration of Unmanned Aircraft Systems (UAS) in the National Airspace System (NAS) is the lack of an onboard pilot that can comply with the legal requirement identified in the US Code of Federal Regulations (CFR) that pilots see and avoid other aircraft. UAS will be expected to demonstrate the means to perform the function of see and avoid while preserving the safety level of the airspace and the efficiency of the air traffic system. This paper introduces a Sense and Avoid (SAA) concept for integration of UAS into the NAS that is currently being developed by the National Aeronautics and Space Administration (NASA) and identifies areas that require additional experimental evaluation to further inform various elements of the concept. The concept design rests on interoperability principles that take into account both the Air Traffic Control (ATC) environment as well as existing systems such as the Traffic Alert and Collision Avoidance System (TCAS). Specifically, the concept addresses the determination of well clear values that are large enough to avoid issuance of TCAS corrective Resolution Advisories, undue concern by pilots of proximate aircraft and issuance of controller traffic alerts. The concept also addresses appropriate declaration times for projected losses of well clear conditions and maneuvers to regain well clear separation.

Ursolic acid attenuates oxidative stress-mediated hepatocellular carcinoma induction by diethylnitrosamine in male Wistar rats.

Science.gov (United States)

Gayathri, Renganathan; Priya, D Kalpana Deepa; Gunassekaran, G R; Sakthisekaran, Dhanapal

2009-01-01

Hepatocellular carcinoma is the most common primary cancer of the liver in Asian countries. For more than a decade natural dietary agents including fruits, vegetables and spices have drawn a great deal of attention in the prevention of diseases, preferably cancer. Ursolic acid is a natural triterpenoid widely found in food, medicinal herbs, apple peel and other products it has been extensively studied for its anticancer and antioxidant properties. The purpose of this study was to evaluate the effect of ursolic acid in diethylnitrosamine (DEN) induced and phenobarbital promoted hepatocarcinogenesis in male Wistar rats. Antioxidant status was assessed by alterations in level of lipid peroxides and protein carbonyls. Damage to plasma membranes was assessed by levels of membrane and tissue ATPases. Liver tissue was homogenized and utilized for estimation of lipid peroxides, protein carbonyls and glycoproteins. Anticoagulated blood was utilized for erythrocyte membrane isolation. Oral administration of UA 20 mg/kg bodyweight for 6 weeks decreased the levels of lipid peroxides and protein carbonyls at a significance of pmembrane and tissue ATPases returned to normal after UA administration. Levels of glycoproteins were also restored after treatment. Histopathological observations were recorded. The findings from the above study suggest the effectiveness of UA in reducing the oxidative stress mediated changes in liver of rats. Since UA has been found to be a potent antioxidant, it can be suggested as an excellent chemopreventive agent in overcoming diseases like cancer which are mediated by free radicals.

Development of Rotary-Wing UAS for Use in Atmospheric Sensing of Near-Storm Environments

Science.gov (United States)

Greene, B. R.; Chilson, P. B.; Salazar-Cerreno, J.; Duthoit, S.; Doyle, B.; Wolf, B.; Segales, A.; Fiebrich, C. A.; Waugh, S.; Fredrickson, S.; Oncley, S.; Tudor, L.; Semmer, S.

2017-12-01

The capabilities of small unmanned aircraft systems (sUAS) to make atmospheric observations is rapidly being realized as a means to collect previously unobtainable observations in the lowest part of Earth's atmosphere. However, in order for these systems to provide meaningful kinematic and thermodynamic data, it is imperative to establish an understanding of the strengths and limitations of the sensors and retrieval algorithms implemented in both controlled and realistic conditions. This initial objective is comprised of two experimental stages, the first of which is calibration of thermodynamic sensors against references from the Oklahoma Mesonet and the National Center for Atmospheric Research in order to understand their quasi-ideal response characteristics. Furthermore, efforts have been made to calculate horizontal wind fields using Euler angles derived from the sUAS's autopilot. The second stage is validation of these sensor performances once mounted onto a rotary-wing sUAS by comparing measurements with instrumented towers, radiosondes, and other sUAS. It appears that these measurements are robust provided that instrument packages are mounted such that they receive adequate air flow and proper solar shielding. Moreover, experiments to locate this optimal location have been performed, and involved systematically displacing the sensors and wind probe underneath the rotor wash in an isolated chamber using a linear actuator. Once a platform's atmospheric sensing capabilities are optimized, its utility has been proven in applications from turbulence to providing forecasters with quasi-real time profiles in convective environments deemed by the Storm Prediction Center to be of highest risk for severe thunderstorms. After addressing the development of platforms operated by the University of Oklahoma, results from recent field campaigns, Collaboration Leading Operational UAS Development for Meteorology and Atmospheric Physics (CLOUD-MAP) and Environmental Profiling

The 0.3-kb fragment containing the R-U5-5'leader sequence of Friend murine leukemia virus influences the level of protein expression from spliced mRNA.

Science.gov (United States)

Choo, Yeng Cheng; Seki, Yohei; Machinaga, Akihito; Ogita, Nobuo; Takase-Yoden, Sayaka

2013-04-19

A neuropathogenic variant of Friend murine leukemia virus (Fr-MLV) clone A8 induces spongiform neurodegeneration when infected into neonatal rats. Studies with chimeras constructed from the A8 virus and the non-neuropathogenic Fr-MLV clone 57 identified a 0.3-kb KpnI-AatII fragment containing a R-U5-5'leader sequence as an important determinant for inducing spongiosis, in addition to the env gene of A8 as the primary determinant. This 0.3-kb fragment contains a 17-nucleotide difference between the A8 and 57 sequences. We previously showed that the 0.3-kb fragment influences expression levels of Env protein in both cultured cells and rat brain, but the corresponding molecular mechanisms are not well understood. Studies with expression vectors constructed from the full-length proviral genome of Fr-MLV that incorporated the luciferase (luc) gene instead of the env gene found that the vector containing the A8-0.3-kb fragment yielded a larger amount of spliced luc-mRNA and showed higher expression of luciferase when compared to the vector containing the 57-0.3-kb fragment. The amount of total transcripts from the vectors, the poly (A) tail length of their mRNAs, and the nuclear-cytoplasm distribution of luc-mRNA in transfected cells were also evaluated. The 0.3-kb fragment did not influence transcription efficiency, mRNA polyadenylation or nuclear export of luc-mRNA. Mutational analyses were carried out to determine the importance of nucleotides that differ between the A8 and 57 sequences within the 0.3-kb fragment. In particular, seven nucleotides upstream of the 5'splice site (5'ss) were found to be important in regulating the level of protein expression from spliced messages. Interestingly, these nucleotides reside within the stem-loop structure that has been speculated to limit the recognition of 5'ss. The 0.3-kb fragment containing the R-U5-5'leader sequence of Fr-MLV influences the level of protein expression from the spliced-mRNA by regulating the splicing

THE USE OF UAS FOR RAPID 3D MAPPING IN GEOMATICS EDUCATION

Directory of Open Access Journals (Sweden)

T.-A. Teo

2016-06-01

Full Text Available With the development of technology, UAS is an advance technology to support rapid mapping for disaster response. The aim of this study is to develop educational modules for UAS data processing in rapid 3D mapping. The designed modules for this study are focused on UAV data processing from available freeware or trial software for education purpose. The key modules include orientation modelling, 3D point clouds generation, image georeferencing and visualization. The orientation modelling modules adopts VisualSFM to determine the projection matrix for each image station. Besides, the approximate ground control points are measured from OpenStreetMap for absolute orientation. The second module uses SURE and the orientation files from previous module for 3D point clouds generation. Then, the ground point selection and digital terrain model generation can be archived by LAStools. The third module stitches individual rectified images into a mosaic image using Microsoft ICE (Image Composite Editor. The last module visualizes and measures the generated dense point clouds in CloudCompare. These comprehensive UAS processing modules allow the students to gain the skills to process and deliver UAS photogrammetric products in rapid 3D mapping. Moreover, they can also apply the photogrammetric products for analysis in practice.

Development of the New Educational Content "small Uas in Civil Engineering Application Scenarios"

Science.gov (United States)

Levin, E.; Vach, K.; Shults, R.

2017-12-01

The key point of this paper is presentation of the main idea and some results of the project "Small UAS in civil engineering application scenarios" (SUAS-CAS). This project was proposed by newly established in 2016 ISPRS WG V/7: "Innovative Technologies in Training Civil Engineers and Architects". Here we are presenting our experience in using low-cost UAS in training architects at Kyiv National University of Construction and Architecture, which was chosen as basic for this project. In the first part of paper, the project outline is presented. Then the first and possible follow project outcomes were described. In some details is described the training module "Small UAS in architecture" which was developed and included as a part of the subject "Architectural photogrammetry".

Suitability assessment of OPC UA as the backbone of ground-based observatory control systems

International Nuclear Information System (INIS)

Pessemier, W.; Raskin, G.; Van Winckel, H.; Deconinck, G.; Saey, P.

2012-01-01

A common requirement of modern observatory control systems is to allow interaction between various heterogeneous subsystems in a transparent way. However, the integration of off-the-shelf (OTS) industrial products - such as Programmable Logic Controllers (PLCs) and Supervisory Control And Data Acquisition (SCADA) software - has long been hampered by the lack of an adequate interfacing method. With the advent of the Unified Architecture (UA) version of OPC (Object Linking and Embedding for Process Control), the limitations of the original industry accepted interface are now lifted, and also much more functionality has been defined. In this paper the most important features of OPC UA are matched against the requirements of ground-based observatory control systems in general and in particular of the 1.2 m Mercator Telescope. We investigate the opportunities of the 'information modelling' idea behind OPC UA, which could allow an extensive standardization in the field of astronomical instrumentation, similar to the efforts emerging in several industry domains. Because OPC UA is designed for both horizontal and vertical integration of heterogeneous subsystems, we explore its capabilities to serve as the backbone of a dependable and scalable observatory control system, treating industrial components like PLCs no differently than custom software components. Performance measurements and tests with a sample of OTS OPC UA products are presented. (authors)

UAS Air Traffic Controller Acceptability Study. 2; Evaluating Detect and Avoid Technology and Communication Delays in Simulation

Science.gov (United States)

Comstock, James R., Jr.; Ghatas, Rania W.; Consiglio, Maria C.; Chamberlain, James P.; Hoffler, Keith D.

2015-01-01

This study evaluated the effects of communications delays and winds on air traffic controller ratings of acceptability of horizontal miss distances (HMDs) for encounters between Unmanned Aircraft Systems (UAS) and manned aircraft in a simulation of the Dallas-Ft. Worth (DFW) airspace. Fourteen encounters per hour were staged in the presence of moderate background traffic. Seven recently retired controllers with experience at DFW served as subjects. Guidance provided to the UAS pilots for maintaining a given HMD was provided by information from Detect and Avoid (DAA) self-separation algorithms (Stratway+) displayed on the Multi-Aircraft Control System. This guidance consisted of amber "bands" on the heading scale of the UAS navigation display indicating headings that would result in a loss of well clear between the UAS and nearby traffic. Winds tested were successfully handled by the DAA algorithms and did not affect the controller acceptability ratings of the HMDs. Voice communications delays for the UAS were also tested and included one-way delay times of 0, 400, 1200, and 1800 msec. For longer communications delays, there were changes in strategy and communications flow that were observed and reported by the controllers. The aim of this work is to provide useful information for guiding future rules and regulations applicable to flying UAS in the NAS. Information from this study will also be of value to the Radio Technical Commission for Aeronautics (RTCA) Special Committee 228 - Minimum Performance Standards for UAS.

Census 2000 Urbanized Areas (CEN00UA02_2)

Data.gov (United States)

California Natural Resource Agency — For Census 2000, the Census Bureau classifies as 'urban' all territory, population, and housing units located within an urbanized area (UA) or an urban cluster (UC)....

VHL Frameshift Mutation as Target of Nonsense-Mediated mRNA Decay in Drosophila melanogaster and Human HEK293 Cell Line

Directory of Open Access Journals (Sweden)

Lucia Micale

2009-01-01

Full Text Available There are many well-studied examples of human phenotypes resulting from nonsense or frameshift mutations that are modulated by Nonsense-Mediated mRNA Decay (NMD, a process that typically degrades transcripts containing premature termination codons (PTCs in order to prevent translation of unnecessary or aberrant transcripts. Different types of germline mutations in the VHL gene cause the von Hippel-Lindau disease, a dominantly inherited familial cancer syndrome with a marked phenotypic variability and age-dependent penetrance. By generating the Drosophila UAS:Upf1D45B line we showed the possible involvement of NMD mechanism in the modulation of the c.172delG frameshift mutation located in the exon 1 of Vhl gene. Further, by Quantitative Real-time PCR (QPCR we demonstrated that the corresponding c.163delG human mutation is targeted by NMD in human HEK 293 cells. The UAS:Upf1D45B line represents a useful system to identify novel substrates of NMD pathway in Drosophila melanogaster. Finally, we suggest the possible role of NMD on the regulation of VHL mutations.

Formation of natural agricultural institutions in the structure of UAS in 1920-1930

Directory of Open Access Journals (Sweden)

Валерій Вікторович Новородовський

2016-09-01

Full Text Available The backgrounds and reasons that caused formation of the network of natural agricultural scientific research institutes in the structure of UAS are analyzed. Taking into account the fact that the main complex of agricultural researches was concentrated in the establishments of PCA of Ukrainian SSR, the focus in the work is done on solving separate applied problems of agricultural sector by UAS establishments

Life Science Start-up Activities at the Universities of Applied Sciences (UAS).

Science.gov (United States)

Huber, Gerda

2014-12-01

The universities of applied sciences (UAS) provide several values for the society and economy of a country. Besides education of high level professionals, transfer of knowledge from research to applications in industry or as new start-up companies is an important task. This is done in different ways in the various disciplines. In Life Sciences, a key industry branch in Switzerland, innovation is a competitive success factor and research findings from UAS/Life Sciences contribute to the valorization of new technologies to products, services and to business performance. In order to foster awareness for the innovation need of industry, UAS install processes and support for transfer of research and technology results to marketable applications. Furthermore they may facilitate contacts of researchers and students with entrepreneurs in order to animate start-up founding as a true alternative to being employed. Access to coaching and entrepreneurial training completes the essential basis.

Fragment-based discovery of novel pentacyclic triterpenoid derivatives as cholesteryl ester transfer protein inhibitors.

Science.gov (United States)

Chang, Yongzhi; Zhou, Shuxi; Li, Enqin; Zhao, Wenfeng; Ji, Yanpeng; Wen, Xiaoan; Sun, Hongbin; Yuan, Haoliang

2017-01-27

Cholesteryl Ester Transfer Protein (CETP) is an important therapeutic target for the treatment of atherosclerotic cardiovascular disease. Our molecular modeling study revealed that pentacyclic triterpenoid compounds could mimic the protein-ligand interactions of the endogenous ligand cholesteryl ester (CE) by occupying its binding site. Alignment of the docking conformations of oleanolic acid (OA), ursolic acid (UA) and the crystal conformations of known CETP inhibitor Torcetrapib in the active site proposed the applicability of fragment-based drug design (FBDD) approaches in this study. Accordingly, a series of pentacyclic triterpenoid derivatives have been designed and synthesized as novel CETP inhibitors. The most potent compound 12e (IC 50 :0.28 μM) validated our strategy for molecular design. Molecular dynamics simulations illustrated that the more stable hydrogen bond interaction of the UA derivative 12e with Ser191 and stronger hydrophobic interactions with Val198, Phe463 than those of OA derivative 12b mainly led to their significantly different CETP inhibitory activity. These novel potent CETP inhibitors based on ursane-type scaffold should deserve further investigation. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

Weather Information Services supporting Civilian UAS Operations, Phase I

Data.gov (United States)

National Aeronautics and Space Administration — We build a system that supports the weather information needs of Unmanned Aircraft Systems (UAS) planning to fly in the National Airspace System (NAS). This weather...

Neo-Epitopes—Fragments of Cartilage and Connective Tissue Degradation in Early Rheumatoid Arthritis and Unclassified Arthritis

DEFF Research Database (Denmark)

Maijer, Karen I; Gudmann, Natasja Stæhr; Karsdal, Morten Asser

2016-01-01

Objective: Tissue destruction in rheumatoid arthritis (RA) is predominantly mediated by matrix metalloproteinases (MMPs), thereby generating protein fragments. Previous studies have revealed that these fragments include MMP-mediated collagen type I, II, and III degradation, citrullinated and MMP...

HALE UAS Command and Control Communications: Step 1 - Functional Requirements Document. Version 4.0

Science.gov (United States)

2006-01-01

The High Altitude Long Endurance (HALE) unmanned aircraft system (UAS) communicates with an off-board pilot-in-command in all flight phases via the C2 data link, making it a critical component for the UA to fly in the NAS safely and routinely. This is a new requirement in current FAA communications planning and monitoring processes. This document provides a set of comprehensive C2 communications functional requirements and performance guidelines to help facilitate the future FAA certification process for civil UAS to operate in the NAS. The objective of the guidelines is to provide the ability to validate the functional requirements and in future be used to develop performance-level requirements.

Advanced Technology Cloud Particle Probe for UAS, Phase I

Data.gov (United States)

National Aeronautics and Space Administration — NASA has initiated a program to explore the upper troposphere/lower stratosphere (UT/LS) using the Global Hawk Unmanned Aerial System (UAS), which has a payload of...

Windhover Unmanned Aircraft Systems (UAS) Software Ecosystem, Phase II

Data.gov (United States)

National Aeronautics and Space Administration — The safety of Unmanned Aircraft Systems (UAS) flights is currently the responsibility of the pilot who is required to keep the vehicle within their line of sight...

Central hadron calorimeter of UA1

International Nuclear Information System (INIS)

Corden, M.J.; Dowell, J.D.; Edwards, M.J.

1983-12-01

An iron-scintillator sampling calorimeter is described, which measures hadronic energy in proton-antiproton interactions at the CERN 540 GeV SPS collider. Construction details are given of the instrumentation of the magnet pieces of the UA1 experiment and of the methods used to measure the calorimeter response and resolution. The system of lasers and quartz fibres, which allows long term monitoring of the calorimeter response, is also described. (author)

Central hadron calorimeter of UA1

International Nuclear Information System (INIS)

Corden, M.J.; Dowell, J.D.; Edwards, M.J.; Ellis, N.N.; Garvey, J.; Grant, D.; Homer, R.J.; Kenyon, I.R.; McMahon, T.J.; Schanz, G.; Sumorok, K.C.T.O.; Watkins, P.M.; Wilson, J.A.; Barnes, G.; Bowcock, T.J.V.; Eisenhandler, E.; Gibson, W.R.; Honma, A.K.; Kalmus, P.I.P.; Keeler, R.K.; Pritchard, T.W.; Salvi, G.A.P.; Thompson, G.; Arnison, G.T.J.; Astbury, A.; Cash, A.R.; Grayer, G.H.; Haynes, W.J.; Hill, D.L.; Moore, D.R.; Nandi, A.K.; Percival, M.D.; Roberts, J.H.C.; Scott, W.G.; Shah, T.P.; Stanhope, R.J.; White, D.E.A.

1985-01-01

An iron-scintillator sampling calorimeter is described, which measures hadronic energy in proton-antiproton interactions at the CERN 540 GeV SPS collider. Construction details are given of the instrumentation of the magnet pieces of the UA1 experiment and of the methods used to measure the calorimeter response and resolution. The system of lasers and quartz fibres, which allows long term monitoring of the calorimeter response, is also described. (orig.)

Purification, crystallization and preliminary X-ray diffraction analysis of enoyl-acyl carrier protein reductase (FabK) from Streptococcus mutans strain UA159

International Nuclear Information System (INIS)

Kim, Tae-O; Im, Dong-Won; Jung, Ha Yun; Kwon, Seong Jung; Heo, Yong-Seok

2012-01-01

Enoyl-acyl carrier protein reductase (FabK) from S. mutans strain UA159 was cloned, overexpressed, purified and crystallized. X-ray diffraction data were collected to a resolution of 2.40 Å. A triclosan-resistant flavoprotein termed FabK is the sole enoyl-acyl carrier protein reductase in Streptococcus pneumoniae and Streptococcus mutans. In this study, FabK from S. mutans strain UA159 was overexpressed in Escherichia coli, purified and crystallized. Diffraction data were collected to 2.40 Å resolution using a synchrotron-radiation source. The crystal belonged to space group P6 2 , with unit-cell parameters a = b = 105.79, c = 44.15 Å. The asymmetric unit contained one molecule, with a corresponding V M of 2.05 Å 3 Da −1 and a solvent content of 39.9%

Overexpression, crystallization and preliminary X-ray crystallographic analysis of the RNA polymerase domain of primase from Streptococcus mutans strain UA159

International Nuclear Information System (INIS)

Im, Dong-Won; Kim, Tae-O; Jung, Ha Yun; Oh, Ji Eun; Lee, Se Jin; Heo, Yong-Seok

2011-01-01

The RNA polymerase domain of primase from S. mutans strain UA159 was cloned, overexpressed, purified and crystallized. X-ray diffraction data were collected to a resolution of 1.60 Å. Primase is the enzyme that synthesizes RNA primers on single-stranded DNA during normal DNA replication. In this study, the catalytic core domain of primase from Streptococcus mutans UA159 was overexpressed in Escherichia coli, purified and crystallized. Diffraction data were collected to 1.60 Å resolution using a synchrotron-radiation source. The crystal belonged to space group P4 1 or P4 3 , with unit-cell parameters a = b = 52.63, c = 110.31 Å. The asymmetric unit is likely to contain one molecule, with a corresponding V M of 1.77 Å 3 Da −1 and a solvent content of 30.7%

Unmanned Aircraft Systems (UAS) Integration in the National Airspace System (NAS) Project FY17 Annual Review

Science.gov (United States)

Sakahara, Robert; Hackenberg, Davis; Johnson, William

2017-01-01

This presentation was presented to the Integrated Aviation Systems Program at the FY17 Annual Review of the UAS-NAS project. The presentation captures the overview of the work completed by the UAS-NAS project and its subprojects.

Agrobacterium tumefaciens-MEDIATED IN-PLANTA TRANSFORMATION OF INDONESIAN MAIZE USING pIG121Hm-Cs PLASMID CONTAINING nptII AND hpt GENES

Directory of Open Access Journals (Sweden)

Edy Listanto

2017-05-01

Full Text Available Maize (Zea mays L. productivity in Indonesia is challenged to be increased using genetic engineering. Recent advances in Agrobacterium tumefaciens-mediated in-planta transforma-tion makes it possible to transform maize with low cost, and simple method. This study aimed to confirm pIG121Hm-Cs plasmid in A. tumefaciens, and to estimate the efficiency level of  A. tumefaciens-mediated in-planta transformation of Indonesian maize by using pIG121Hm-Cs plasmid containing nptII and hpt genes. A series of studies were conducted including confirmation of gene construct of pIG121Hm-Cs plasmid in A. tumefaciens, transformation of four maize lines through A. tumefaciens-mediated in-planta technique, acclimatization of transformant plants and molecular analysis of selected plants using polymerase chain reaction (PCR. The pIG121Hm-Cs plasmid was confirmed via PCR analysis using specific primers of nptII and hpt genes and resulted 700 bp and 500 bp for fragments of nptII and hpt, respectively. After selection, acclimatization and molecular analysis steps, the efficiency levels of transformation of four maize lines were low, ranging from 3.8% to 12.8%. The level of transformation efficiency of ST-27 line was the highest accounting for 12.8% of 45 planted embryos on selection medium based on PCR analysis using specific primer for nptII gene. Overall, A. tumefaciens-mediated in planta transformation on maize floral pistil in this study proved to be successful and rapid. Therefore, this enhanced transformation method will be beneficial for Indonesian maize genetic engineering.

Changes in mediators of inflammation and pro-thrombosis after 12 ...

African Journals Online (AJOL)

Changes in mediators of inflammation and pro-thrombosis after 12 months of dietary modification in adults with metabolic syndrome. S.K. Rahamon, U.A. Fabian, M.A. Charles-Davies, J.A. Olaniyi, A.A. Fasanmade, K.S. Akinlade, O.E. Oyewole, M.O. Owolabi, J.R. Adebusuyi, O.O. Hassan, B.M. Ajobo, M.O. Ebesunun, ...

Geochemistry of Ua Huka basalts (Marquesas): partial melting variations and mantle source heterogeneity

International Nuclear Information System (INIS)

Ielsch, G.; Caroff, M.; Maury, R.C.; Cotten, J.; Barsczus, H.G.; Guillou, H.

1998-01-01

The main shield volcano of Ua Huka Island (Marquesas Archipelago) was emplaced between 2.2 and 2.4 Ma, and then affected by two caldera collapse events. After a 0.9 Ma-long gap, volcanic activity resumed with the emplacement of two smaller volcanoes in the southwest part of the island, between 1.5 and 0.75 Ma. The geochemical characteristics of Ua Huka mafic lavas, which range from olivine tholeiites to alkali basalts and basanites, are consistent with a temporal decrease in partial melting degrees of a heterogeneous mantle source. The associated temporal variation of the isotopic signatures of Ua Huka basalts implies a more important contribution of a Depleted MORB Mantle (DMM) end-member during the genesis of the youngest basanitic lavas. Such a variation was not previously documented in the Marquesas Archipelago. (authors)

Evaluation of Unmanned Aircraft Systems (UAS) for Weather and Climate using the Multi-testbed approach

Science.gov (United States)

Baker, B.; Lee, T.; Buban, M.; Dumas, E. J.

2017-12-01

Evaluation of Unmanned Aircraft Systems (UAS) for Weather and Climate using the Multi-testbed approachC. Bruce Baker1, Ed Dumas1,2, Temple Lee1,2, Michael Buban1,21NOAA ARL, Atmospheric Turbulence and Diffusion Division, Oak Ridge, TN2Oak Ridge Associated Universities, Oak Ridge, TN The development of a small Unmanned Aerial System (sUAS) testbeds that can be used to validate, integrate, calibrate and evaluate new technology and sensors for routine boundary layer research, validation of operational weather models, improvement of model parameterizations, and recording observations within high-impact storms is important for understanding the importance and impact of using sUAS's routinely as a new observing platform. The goal of the multi-testbed approach is to build a robust set of protocols to assess the cost and operational feasibility of unmanned observations for routine applications using various combinations of sUAS aircraft and sensors in different locations and field experiments. All of these observational testbeds serve different community needs, but they also use a diverse suite of methodologies for calibration and evaluation of different sensors and platforms for severe weather and boundary layer research. The primary focus will be to evaluate meteorological sensor payloads to measure thermodynamic parameters and define surface characteristics with visible, IR, and multi-spectral cameras. This evaluation will lead to recommendations for sensor payloads for VTOL and fixed-wing sUAS.

The application of unmanned aerial systems (UAS) in geophysical investigations of geothermal systems

Science.gov (United States)

Glen, J. M.; Egger, A. E.; Ippolito, C.; Phelps, G. A.; Berthold, R.; Lee, R.; Spritzer, J. M.; Tchernychev, M.

2012-12-01

Investigations of geothermal systems typically involve ground-based geological and geophysical studies in order to map structures that control and facilitate fluid flow. The spatial extent of ground-based investigations can be limited, however, by surficial hot springs, dense foliage, and roadless or private lands. This can result in data gaps in key areas, particularly around active hydrothermal springs. Manned aircraft can provide access to these areas and can yield broad and uniform data coverage, but high-resolution surveys are costly and relatively inflexible to changes in the survey specifications that may arise as data are collected. Unmanned aerial systems (UAS) are well suited for conducting these surveys, but until recently, various factors (scientific instrumentation requirements, platform limitations, and size of the survey area) have required the use of large UAS platforms, rendering unmanned aerial surveys unsuitable for most investigations. We have developed and tested a new cesium magnetometer system to collect magnetic data using two different small-platform UAS that overcomes many of the challenges described above. We are deploying this new system in Surprise Valley, CA, to study the area's active geothermal field. Surprise Valley is ideally suited to testing UAS due to its low population density, accessible airspace, and broad playa that provides ample opportunity to safely land the aircraft. In combination with gravity and topographic data, magnetic data are particularly useful for identifying buried, intra-basin structures, especially in areas such as Surprise Valley where highly magnetic, dense mafic volcanic rocks are interbedded with and faulted against less magnetic, less dense sedimentary rock. While high-resolution gravity data must be collected at point locations on the ground, high-resolution magnetic data can be obtained by UAS that provide continuous coverage. Once acquired, the magnetic data obtained by the UAS will be combined with

JEFX 10 demonstration of Cooperative Hunter Killer UAS and upstream data fusion

Science.gov (United States)

Funk, Brian K.; Castelli, Jonathan C.; Watkins, Adam S.; McCubbin, Christopher B.; Marshall, Steven J.; Barton, Jeffrey D.; Newman, Andrew J.; Peterson, Cammy K.; DeSena, Jonathan T.; Dutrow, Daniel A.; Rodriguez, Pedro A.

2011-05-01

The Johns Hopkins University Applied Physics Laboratory deployed and demonstrated a prototype Cooperative Hunter Killer (CHK) Unmanned Aerial System (UAS) capability and a prototype Upstream Data Fusion (UDF) capability as participants in the Joint Expeditionary Force Experiment 2010 in April 2010. The CHK capability was deployed at the Nevada Test and Training Range to prosecute a convoy protection operational thread. It used mission-level autonomy (MLA) software applied to a networked swarm of three Raven hunter UAS and a Procerus Miracle surrogate killer UAS, all equipped with full motion video (FMV). The MLA software provides the capability for the hunter-killer swarm to autonomously search an area or road network, divide the search area, deconflict flight paths, and maintain line of sight communications with mobile ground stations. It also provides an interface for an operator to designate a threat and initiate automatic engagement of the target by the killer UAS. The UDF prototype was deployed at the Maritime Operations Center at Commander Second Fleet, Naval Station Norfolk to provide intelligence analysts and the ISR commander with a common fused track picture from the available FMV sources. It consisted of a video exploitation component that automatically detected moving objects, a multiple hypothesis tracker that fused all of the detection data to produce a common track picture, and a display and user interface component that visualized the common track picture along with appropriate geospatial information such as maps and terrain as well as target coordinates and the source video.

Application of Unmanned Aircraft Systems (UAS) for phenotypic mapping of white spruce genotypes along environmental gradients

Science.gov (United States)

D'Odorico, P.; Wong, C. Y.; Besik, A.; Earon, E.; Isabel, N.; Ensminger, I.

2017-12-01

Rapid climate change is expected to cause a mismatch between locally adapted tree populations and the optimal climatic conditions to which they have adapted. Plant breeding and reforestation programs will increasingly need to rely on high-throughput precision phenotyping tools for the selection of genotypes with increased drought and stress tolerance. In this work, we present the possibilities offered by Unmanned Aircraft Systems (UAS) carrying optical sensors to monitor and assess differences in performance among white spruce genotypes. While high-throughput precision phenotyping using UAS has gained traction in agronomic crop research during the last few years, to our knowledge it is still at its infancy in forestry applications. UAS surveys were performed at different times during the growing season over large white spruce common garden experiments established by the Canadian Forest Service at four different sites, each characterized by 2000 clonally replicated genotypes. Sites are distributed over a latitudinal gradient, in Ontario and Quebec, Canada. The UAS payload consisted of a custom-bands multispectral sensor acquiring radiation at wavelength at which the reflectance spectrum of vegetation is known to capture physiological change under disturbance and stress. Ground based tree-top spectral reflectances and leaf level functional traits were also acquired for validation purposes parallel to UAS surveys. We will discuss the potential and the challenges of using optical sensors on UAS to infer genotypic variation in tree response to stress events and show how spectral data can function as the link between large-scale phenotype and genotype data.

SKI2 mediates degradation of RISC 5'-cleavage fragments and prevents secondary siRNA production from miRNA targets in Arabidopsis.

Science.gov (United States)

Branscheid, Anja; Marchais, Antonin; Schott, Gregory; Lange, Heike; Gagliardi, Dominique; Andersen, Stig Uggerhøj; Voinnet, Olivier; Brodersen, Peter

2015-12-15

Small regulatory RNAs are fundamental in eukaryotic and prokaryotic gene regulation. In plants, an important element of post-transcriptional control is effected by 20-24 nt microRNAs (miRNAs) and short interfering RNAs (siRNAs) bound to the ARGONAUTE1 (AGO1) protein in an RNA induced silencing complex (RISC). AGO1 may cleave target mRNAs with small RNA complementarity, but the fate of the resulting cleavage fragments remains incompletely understood. Here, we show that SKI2, SKI3 and SKI8, subunits of a cytoplasmic cofactor of the RNA exosome, are required for degradation of RISC 5', but not 3'-cleavage fragments in Arabidopsis. In the absence of SKI2 activity, many miRNA targets produce siRNAs via the RNA-dependent RNA polymerase 6 (RDR6) pathway. These siRNAs are low-abundant, and map close to the cleavage site. In most cases, siRNAs were produced 5' to the cleavage site, but several examples of 3'-spreading were also identified. These observations suggest that siRNAs do not simply derive from RDR6 action on stable 5'-cleavage fragments and hence that SKI2 has a direct role in limiting secondary siRNA production in addition to its function in mediating degradation of 5'-cleavage fragments. © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research.

Varying Levels of Automation on UAS Operator Responses to Traffic Resolution Advisories in Civil Airspace

Science.gov (United States)

Kenny, Caitlin; Fern, Lisa

2012-01-01

Continuing demand for the use of Unmanned Aircraft Systems (UAS) has put increasing pressure on operations in civil airspace. The need to fly UAS in the National Airspace System (NAS) in order to perform missions vital to national security and defense, emergency management, and science is increasing at a rapid pace. In order to ensure safe operations in the NAS, operators of unmanned aircraft, like those of manned aircraft, may be required to maintain separation assurance and avoid loss of separation with other aircraft while performing their mission tasks. This experiment investigated the effects of varying levels of automation on UAS operator performance and workload while responding to conflict resolution instructions provided by the Tactical Collision Avoidance System II (TCAS II) during a UAS mission in high-density airspace. The purpose of this study was not to investigate the safety of using TCAS II on UAS, but rather to examine the effect of automation on the ability of operators to respond to traffic collision alerts. Six licensed pilots were recruited to act as UAS operators for this study. Operators were instructed to follow a specified mission flight path, while maintaining radio contact with Air Traffic Control and responding to TCAS II resolution advisories. Operators flew four, 45 minute, experimental missions with four different levels of automation: Manual, Knobs, Management by Exception, and Fully Automated. All missions included TCAS II Resolution Advisories (RAs) that required operator attention and rerouting. Operator compliance and reaction time to RAs was measured, and post-run NASA-TLX ratings were collected to measure workload. Results showed significantly higher compliance rates, faster responses to TCAS II alerts, as well as less preemptive operator actions when higher levels of automation are implemented. Physical and Temporal ratings of workload were significantly higher in the Manual condition than in the Management by Exception and

Directly Transforming PCR-Amplified DNA Fragments into Plant Cells Is a Versatile System That Facilitates the Transient Expression Assay

Science.gov (United States)

Lu, Yuming; Chen, Xi; Wu, Yuxuan; Wang, Yanping; He, Yuqing; Wu, Yan

2013-01-01

A circular plasmid containing a gene coding sequence has been broadly used for studying gene regulation in cells. However, to accommodate a quick screen plasmid construction and preparation can be time consuming. Here we report a PCR amplified dsDNA fragments (PCR-fragments) based transient expression system (PCR-TES) for suiting in the study of gene regulation in plant cells. Instead of transforming plasmids into plant cells, transient expression of PCR-fragments can be applicable. The transformation efficiency and expression property of PCR-fragments are comparable to transformation using plasmids. We analyzed the transformation efficiency in PCR-TES at transcription and protein levels. Our results indicate that the PCR-TES is as versatile as the conventional transformation system using plasmid DNA. Through reconstituting PYR1-mediated ABA signaling pathway in Arabidopsis mesophyll protoplasts, we were not only validating the practicality of PCR-TES but also screening potential candidates of CDPK family members which might be involved in the ABA signaling. Moreover, we determined that phosphorylation of ABF2 by CPK4 could be mediated by ABA-induced PYR1 and ABI1, demonstrating a crucial role of CDPKs in the ABA signaling. In summary, PCR-TES can be applicable to facilitate analyzing gene regulation and for the screen of putative regulatory molecules at the high throughput level in plant cells. PMID:23468926

Directly transforming PCR-amplified DNA fragments into plant cells is a versatile system that facilitates the transient expression assay.

Directory of Open Access Journals (Sweden)

Yuming Lu

Full Text Available A circular plasmid containing a gene coding sequence has been broadly used for studying gene regulation in cells. However, to accommodate a quick screen plasmid construction and preparation can be time consuming. Here we report a PCR amplified dsDNA fragments (PCR-fragments based transient expression system (PCR-TES for suiting in the study of gene regulation in plant cells. Instead of transforming plasmids into plant cells, transient expression of PCR-fragments can be applicable. The transformation efficiency and expression property of PCR-fragments are comparable to transformation using plasmids. We analyzed the transformation efficiency in PCR-TES at transcription and protein levels. Our results indicate that the PCR-TES is as versatile as the conventional transformation system using plasmid DNA. Through reconstituting PYR1-mediated ABA signaling pathway in Arabidopsis mesophyll protoplasts, we were not only validating the practicality of PCR-TES but also screening potential candidates of CDPK family members which might be involved in the ABA signaling. Moreover, we determined that phosphorylation of ABF2 by CPK4 could be mediated by ABA-induced PYR1 and ABI1, demonstrating a crucial role of CDPKs in the ABA signaling. In summary, PCR-TES can be applicable to facilitate analyzing gene regulation and for the screen of putative regulatory molecules at the high throughput level in plant cells.

The new UA1 calorimeter trigger

International Nuclear Information System (INIS)

Eisenhandler, E.

1988-01-01

The new UA1 first-level calorimeter trigger processor is described, with emphasis on the fast two-dimensional electromagnetic cluster-finding that is its most novel feature. This processor is about five times more powerful than its predecessor, and makes extensive use of pipelining techniques. It allows multiple combinations of triggers on electromagnetic showers, hadronic jets and energy sums, including a total-energy veto of multiple interactions and a full vector sum of missing transverse energy. (author)

Magnetic phase diagram of the UAs - USe system

International Nuclear Information System (INIS)

Obolenski, M.; Troc, R.

1977-01-01

The UAssub(1-x)Sesub(x) system was investigated in detail by means of magnetic susceptibility and magnetization measurements. For UAs the sharp transition on the chi vs. T curve at 41 K has been additionally found. For the compositions with x 0.55 all samples are ferro magnetic. (author)

The Impact of Suggestive Maneuver Guidance on UAS Pilots Performing the Detect and Avoid Function

Science.gov (United States)

Rorie, Conrad; Fern, Lisa; Shively, Jay

2016-01-01

This presentation discusses the results of a recent UAS Integration into the NAS human-in-the-loop simulation. In the study, 16 active UAS pilots flew a UAS through civil airspace and were tasked with maintaining well clear from other aircraft in the area. Pilots performed the task with four different detect and avoid (DAA) traffic displays, each of which varied in the form of guidance it provided to pilots The present findings focus on how the different displays impacted pilots' measured response to scripted conflicts with their aircraft. Measured response is made up of several components, each of which help inform our understanding of the pilots' role in the overall detect and avoid task.

Vicarious Calibration of sUAS Microbolometer Temperature Imagery for Estimation of Radiometric Land Surface Temperature

Directory of Open Access Journals (Sweden)

Alfonso Torres-Rua

2017-06-01

Full Text Available In recent years, the availability of lightweight microbolometer thermal cameras compatible with small unmanned aerial systems (sUAS has allowed their use in diverse scientific and management activities that require sub-meter pixel resolution. Nevertheless, as with sensors already used in temperature remote sensing (e.g., Landsat satellites, a radiance atmospheric correction is necessary to estimate land surface temperature. This is because atmospheric conditions at any sUAS flight elevation will have an adverse impact on the image accuracy, derived calculations, and study replicability using the microbolometer technology. This study presents a vicarious calibration methodology (sUAS-specific, time-specific, flight-specific, and sensor-specific for sUAS temperature imagery traceable back to NIST-standards and current atmospheric correction methods. For this methodology, a three-year data collection campaign with a sUAS called “AggieAir”, developed at Utah State University, was performed for vineyards near Lodi, California, for flights conducted at different times (early morning, Landsat overpass, and mid-afternoon” and seasonal conditions. From the results of this study, it was found that, despite the spectral response of microbolometer cameras (7.0 to 14.0 μm, it was possible to account for the effects of atmospheric and sUAS operational conditions, regardless of time and weather, to acquire accurate surface temperature data. In addition, it was found that the main atmospheric correction parameters (transmissivity and atmospheric radiance significantly varied over the course of a day. These parameters fluctuated the most in early morning and partially stabilized in Landsat overpass and in mid-afternoon times. In terms of accuracy, estimated atmospheric correction parameters presented adequate statistics (confidence bounds under ±0.1 for transmissivity and ±1.2 W/m2/sr/um for atmospheric radiance, with a range of RMSE below 1.0 W/m2/sr

Rapid construction of a Bacterial Artificial Chromosomal (BAC) expression vector using designer DNA fragments.

Science.gov (United States)

Chen, Chao; Zhao, Xinqing; Jin, Yingyu; Zhao, Zongbao Kent; Suh, Joo-Won

2014-11-01

Bacterial artificial chromosomal (BAC) vectors are increasingly being used in cloning large DNA fragments containing complex biosynthetic pathways to facilitate heterologous production of microbial metabolites for drug development. To express inserted genes using Streptomyces species as the production hosts, an integration expression cassette is required to be inserted into the BAC vector, which includes genetic elements encoding a phage-specific attachment site, an integrase, an origin of transfer, a selection marker and a promoter. Due to the large sizes of DNA inserted into the BAC vectors, it is normally inefficient and time-consuming to assemble these fragments by routine PCR amplifications and restriction-ligations. Here we present a rapid method to insert fragments to construct BAC-based expression vectors. A DNA fragment of about 130 bp was designed, which contains upstream and downstream homologous sequences of both BAC vector and pIB139 plasmid carrying the whole integration expression cassette. In-Fusion cloning was performed using the designer DNA fragment to modify pIB139, followed by λ-RED-mediated recombination to obtain the BAC-based expression vector. We demonstrated the effectiveness of this method by rapid construction of a BAC-based expression vector with an insert of about 120 kb that contains the entire gene cluster for biosynthesis of immunosuppressant FK506. The empty BAC-based expression vector constructed in this study can be conveniently used for construction of BAC libraries using either microbial pure culture or environmental DNA, and the selected BAC clones can be directly used for heterologous expression. Alternatively, if a BAC library has already been constructed using a commercial BAC vector, the selected BAC vectors can be manipulated using the method described here to get the BAC-based expression vectors with desired gene clusters for heterologous expression. The rapid construction of a BAC-based expression vector facilitates

Addition of Sodium Bicarbonate to Irrigation Solution May Assist in Dissolution of Uric Acid Fragments During Ureteroscopy

DEFF Research Database (Denmark)

Paonessa, Jessica E; Williams, James C; Lingeman, James E

2018-01-01

INTRODUCTION: We hypothesized that adding sodium bicarbonate (bicarb) to normal saline (NS) irrigation during ureteroscopy in patients with uric acid (UA) nephrolithiasis may assist in dissolving small stone fragments produced during laser lithotripsy. In vitro testing was performed to determine....../L NS yielded a dissolution rate averaging 22% ± 7% per hour, which was nearly five times higher than NS alone. There was a trend for an increase in mean dissolution rate with higher temperature but this increase was not significant (p = 0.30). CONCLUSIONS: The addition of bicarbonate to NS more than...

A tool based on Ligation Detection Reaction-Universal Array (LDR-UA) for the characterization of VTEC by identification of virulence-associated and serogroup-specific genes.

Science.gov (United States)

Lauri, Andrea; Castiglioni, Bianca; Morabito, Stefano; Tozzoli, Rosangela; Consolandi, Clarissa; Mariani, Paola

2011-02-01

Verocytoxigenic Escherichia coli (VTEC) are zoonotic pathogens whose natural reservoir is represented by ruminants, particularly cattle. Infections are mainly acquired by consumption of undercooked contaminated food of animal origin, contact with infected animals and contaminated environment. VTEC O157 is the most frequently isolated serogroup from cases of human disease, however, other VTEC serogroups, such as O26, O111, O145 and O103, are increasingly reported as causing Hemolytic Uremic Syndrome (HUS) worldwide. The identification of VTEC is troublesome, hindering the development of effective prevention strategies. In fact, VTEC are morphologically indistinguishable from harmless E. coli and their pathogenic potential is not strictly dependent on the serogroup, but relies on the presence of a collection of virulence genes. We developed a diagnostic tool for VTEC based on the Ligation Detection Reaction coupled to Universal Array (LDR-UA) for the simultaneous identification of virulence factors and serogroup-associated genes. The method includes the investigation of 40 sites located in 13 fragments from 12 genes (sodCF1/F2, adfO, terB, ehxA, eae, vtx1, vtx2, ihp1, wzx, wbdI, rfbE, dnaK) and was evaluated by performing a trial on a collection of 67 E. coli strains, both VTEC and VT-negative E. coli, as well as on 25 isolates belonging to other related species. Results of this study showed that the LDR-UA technique was specific in identifying the target microorganism. Moreover, due to its higher throughput, the LDR-UA can be a valid and cheaper alternative to real time PCR-based (rt-PCR) methods for VTEC identification. Copyright © 2010 Elsevier Ltd. All rights reserved.

UA9 Results from Crystal Collimation Tests in the SPS & Future Strategy

CERN Document Server

Scandale, W

2013-01-01

The UA9 Collaboration, with support by EuCARD-AccNet, is investigating how bent crystals, used as primary collimators, could assist and improve the collimation process in modern hadron colliders like the LHC. From 2009 onwards the UA9 Collaboration has successfully tested silicon crystals at the SPS, performing measurements of the associated collimation efficiency by means of various methods and detectors. This report presents the main UA9 results, obtained with protons and Pb ions at 120 GeV/c and 270 GeV/c per charge from 2009 to 2012, which indicate that crystal assisted collimation is well mastered and understood. Specifically, reduced loss rates were demonstrated close to the crystal, as well as in a downstream off-momentum region, and, indeed, all around the ring. In addition, the importance of the crystal miscut angle was elucidated and a first industrial goniometer compliant with LHC specifications has become available. At the end of the report, the near-term plan for LHC crystal collimation is descri...

Thermodynamics of the fuel fragmentation gas

International Nuclear Information System (INIS)

Perez, R.B.; Alsmiller, R.G. Jr.

1977-01-01

In the context of nuclear reactor safety studies, a program is in progress at ORNL whereby fuel-fragmentation situations are mocked up by the application of high-current capacitor discharges through solid UO 2 samples. The goal of the present work is to predict such quantities as the number of gas and liquid fragments and their energy distributions. The point of view adopted is that upon fragmentation, a cloud of UO 2 vapor is formed containing ''primeval'' liquid fragments which act as condensation centers. In the evolution of time, fragment growth is controlled by nucleation, coagulation and evaporation processes. Eventually, the vapor-droplet system will reach a situation in which clusters (fragments) of various sizes and UO 2 vapor will coexist in an ''association-disassociation'' equilibrium. Thus, the physical model considered here consists of the identification of the fragmentation gas with an ''imperfect'' vapor, made up of interacting UO 2 vapor and liquid fragments. The results of the study are presented

Songbird - AN Innovative Uas Combining the Advantages of Fixed Wing and Multi Rotor Uas

Science.gov (United States)

Thamm, F.-P.; Brieger, N.; Neitzke, K.-P.; Meyer, M.; Jansen, R.; Mönninghof, M.

2015-08-01

This paper describes a family of innovative fixed wing UAS with can vertical take off and land - the SONGBIRD family. With nominal payloads starting from 0.5 kg they can take off and land safely like a multi-rotor UAV, removing the need for an airstrip for the critical phases of operation. A specially designed flight controller allows stable flight at every point of the transition phase between VTOL and fixed wing mode. Because of this smooth process with a all time stable flight, very expensive payload like hyperspectral sensors or advanced optical cameras can be used. Due to their design all airplanes of the SONGBIRD family have excellent horizontal flight properties, a maximum speed of over 110 km/h, good gliding properties and long flight times of up to 1 h. Missions were flown in wind speeds up to 18 m/s. At every time of the flight it is possible to interrupt the mission and hover over a point of interest for detail investigations. The complete flight, including take-off and landing can be performed by autopilot. Designed for daily use in professional environments, SONGBIRDs are built out of glass-fibre and carbon composites for a long service life. For safe operations comprehensive security features are implemented, for example redundant flight controllers and sensors, advanced power management system and mature fail safe procedures. The aircraft can be dismantled into small parts for transportation. SONGBIRDS are available for different pay loads, from 500 g to 2 kg. The SONGBIRD family are interesting tools combining the advantages of multi-copter and fixed wing UAS.

Study on penetration-induced initiation of energetic fragment

Science.gov (United States)

Qiao, Xiangxin; Xu, Heyang

2017-09-01

In order to investigate penetration-induced initiation of energetic fragment penetrating target, PTFE/Al (mass ratio 73.5/26.5) pressed and sintered into a Ф8mm × 8mm cylinder. To form energetic fragment, the cylinder was put into a closed container made by 35CrMnSiA. The container is 12mm long, 2mm thick. Energetic fragments were launched by a 14.5mm ballistic gun with a series of velocities and the penetrate process was simulated by AUTODYN-3D. The results show that the stress peak of energetic material exceed the initiation threshold, and energetic material will deflagrate, when energetic fragments impact velocity more than 800 m/s. The research results can provide reference for designs of energetic warhead.

Sixty-five radiation hybrids for the short arm of human chromosome 6: their value as a mapping panel and as a source for rapid isolation of new probes using repeat element-mediated PCR

International Nuclear Information System (INIS)

Zoghbi, H.Y.; McCall, A.E.; LeBorgne-Demarquoy, F.

1991-01-01

We have used an irradiation and fusion procedure to generate somatic cell hybrids that retain fragments of the short arm of human chromosome 6 (6p). To identify hybrids retaining human material, we performed repeat element-mediated PCR on crude lysates of cells from individual clones. Sixty-five hybrids were shown to contain human material and fifty of those contained one or more 6p-specific probes. Detailed characterization of these hybrids identified a subset that divides 6p into ten mapping intervals. Using repeat element-mediated PCR, we were able to isolate and map 61 new DNA fragments from specific regions of 6p. Fifteen of these fragments were used to screen for restriction fragment length polymorphisms (RFLPs), and nine identified RFLPs with one or more enzymes. The radiation hybrids described in this study provide a valuable resource for high-resolution mapping of 6p and for the rapid isolation of region-specific markers

Self-Leadership among Savonia UAS Students

OpenAIRE

Tuovinen, Tomi

2010-01-01

The objective was to explain the essence of self-leadership and to do a research about Savonia UAS students’ self-leadership skills. The reason for the topic is that according to several studies self-leadership has a clear positive impact on self-confidence, efficiency and performance in general. First the concept and importance of self-leadership are explained in general. The third chapter covers the theories in detail. The main frame of reference is the total wellness model by Sydänmaan...

Molecular mechanisms mediating the neuroproyective effects of quinacrine and minocycline on cell death induced by the prion protein fragment 90-231 (hPrP90-231

Directory of Open Access Journals (Sweden)

V. Villa

2011-01-01

Full Text Available The effects of quinacrine and minocycline on the toxicity induced by hPrP90-231 were studied. By mild thermal denaturation, hPrP90-231 can be converted in a toxic PrPSc-like structure affecting the survival of SH-SY5Y cells. Quinacrine and minocycline prevented hPrP90-231-induced toxicity interfering with different mechanisms: protective effects of quinacrine are mediated by the binding to the fragment that abolished hPrP90-231 structural changes and cell internalization, whereas, minocycline reverted MAP kinase neurotoxic signaling exerted by the prion fragment.

Improving Understanding of Spatial Heterogeneity in Mountain Ecohydrology with Multispectral Unmanned Aerial Systems (UAS).

Science.gov (United States)

Wigmore, O.; Molotch, N. P.

2017-12-01

Mountain regions are a critical component of the hydrologic system. These regions are extremely heterogeneous, with dramatic topographic, climatic, ecologic and hydrologic variations occurring over very short distances. This heterogeneity makes understanding changes in these environments difficult. Commonly used satellite data are often too coarse to resolve processes at appropriate scales and point measurements are typically unrepresentative of the wider region. The rapid rise of Unmanned Aerial Systems (UAS) offers a potential solution to the scale-related inadequacies of satellite and ground-based observing systems. Using UAS, spatially distributed datasets can be collected at high resolution (i.e. cm), on demand, and can therefore facilitate improved understanding of mountain ecohydrology. We deployed a custom built multispectral - visible (RGB), near infrared (NIR) and thermal infrared (TIR) - UAS at a weekly interval over the Niwot Ridge Long Term Ecological Research (NWT LTER) saddle catchment at 3500masl in the Colorado Rockies. This system was used to map surface water pathways, land cover and topography, and quantify ecohydrologic variables including, snow depth, vegetation productivity and surface soil moisture at 5-50cm resolution across an 80ha study area. This presentation will discuss the techniques, methods and merits of using UAS derived multispectral data for ecohydrologic research in mountain regions. We will also present preliminary findings from our survey time series at NWT LTER and a discussion of the potential insights that these datasets can provide. Key questions to be addressed are: 1) how does spatial variability in snow depth impact soil moisture and vegetation productivity, 2) how can UAS help us to identify ecohydrologic `hotspots' and `hot moments' across heterogeneous landscapes.

PERFORMANCE EVALUATION OF sUAS EQUIPPED WITH VELODYNE HDL-32E LiDAR SENSOR

Directory of Open Access Journals (Sweden)

G. Jozkow

2017-08-01

Full Text Available The Velodyne HDL-32E laser scanner is used more frequently as main mapping sensor in small commercial UASs. However, there is still little information about the actual accuracy of point clouds collected with such UASs. This work evaluates empirically the accuracy of the point cloud collected with such UAS. Accuracy assessment was conducted in four aspects: impact of sensors on theoretical point cloud accuracy, trajectory reconstruction quality, and internal and absolute point cloud accuracies. Theoretical point cloud accuracy was evaluated by calculating 3D position error knowing errors of used sensors. The quality of trajectory reconstruction was assessed by comparing position and attitude differences from forward and reverse EKF solution. Internal and absolute accuracies were evaluated by fitting planes to 8 point cloud samples extracted for planar surfaces. In addition, the absolute accuracy was also determined by calculating point 3D distances between LiDAR UAS and reference TLS point clouds. Test data consisted of point clouds collected in two separate flights performed over the same area. Executed experiments showed that in tested UAS, the trajectory reconstruction, especially attitude, has significant impact on point cloud accuracy. Estimated absolute accuracy of point clouds collected during both test flights was better than 10 cm, thus investigated UAS fits mapping-grade category.

Performance Evaluation of sUAS Equipped with Velodyne HDL-32E LiDAR Sensor

Science.gov (United States)

Jozkow, G.; Wieczorek, P.; Karpina, M.; Walicka, A.; Borkowski, A.

2017-08-01

The Velodyne HDL-32E laser scanner is used more frequently as main mapping sensor in small commercial UASs. However, there is still little information about the actual accuracy of point clouds collected with such UASs. This work evaluates empirically the accuracy of the point cloud collected with such UAS. Accuracy assessment was conducted in four aspects: impact of sensors on theoretical point cloud accuracy, trajectory reconstruction quality, and internal and absolute point cloud accuracies. Theoretical point cloud accuracy was evaluated by calculating 3D position error knowing errors of used sensors. The quality of trajectory reconstruction was assessed by comparing position and attitude differences from forward and reverse EKF solution. Internal and absolute accuracies were evaluated by fitting planes to 8 point cloud samples extracted for planar surfaces. In addition, the absolute accuracy was also determined by calculating point 3D distances between LiDAR UAS and reference TLS point clouds. Test data consisted of point clouds collected in two separate flights performed over the same area. Executed experiments showed that in tested UAS, the trajectory reconstruction, especially attitude, has significant impact on point cloud accuracy. Estimated absolute accuracy of point clouds collected during both test flights was better than 10 cm, thus investigated UAS fits mapping-grade category.

Route to three-dimensional fragments using diversity-oriented synthesis.

Science.gov (United States)

Hung, Alvin W; Ramek, Alex; Wang, Yikai; Kaya, Taner; Wilson, J Anthony; Clemons, Paul A; Young, Damian W

2011-04-26

Fragment-based drug discovery (FBDD) has proven to be an effective means of producing high-quality chemical ligands as starting points for drug-discovery pursuits. The increasing number of clinical candidate drugs developed using FBDD approaches is a testament of the efficacy of this approach. The success of fragment-based methods is highly dependent on the identity of the fragment library used for screening. The vast majority of FBDD has centered on the use of sp(2)-rich aromatic compounds. An expanded set of fragments that possess more 3D character would provide access to a larger chemical space of fragments than those currently used. Diversity-oriented synthesis (DOS) aims to efficiently generate a set of molecules diverse in skeletal and stereochemical properties. Molecules derived from DOS have also displayed significant success in the modulation of function of various "difficult" targets. Herein, we describe the application of DOS toward the construction of a unique set of fragments containing highly sp(3)-rich skeletons for fragment-based screening. Using cheminformatic analysis, we quantified the shapes and physical properties of the new 3D fragments and compared them with a database containing known fragment-like molecules.

Meeting of Experts on NASA's Unmanned Aircraft System (UAS) Integration in the National Airspace Systems (NAS) Project

Science.gov (United States)

Wolfe, Jean; Bauer, Jeff; Bixby, C.J.; Lauderdale, Todd; Shively, Jay; Griner, James; Hayhurst, Kelly

2010-01-01

Topics discussed include: Aeronautics Research Mission Directorate Integrated Systems Research Program (ISRP) and UAS Integration in the NAS Project; UAS Integration into the NAS Project; Separation Assurance and Collision Avoidance; Pilot Aircraft Interface Objectives/Rationale; Communication; Certification; and Integrated Tests and Evaluations.

Generation of a panel of somatic cell hybrids containing unselected fragments of human chromosome 10 by X-ray irradiation and cell fusion: Application to isolating the MEN2A region in hybrid cells

International Nuclear Information System (INIS)

Goodfellow, P.J.; Povey, S.; Nevanlinna, H.A.; Goodfellow, P.N.

1990-01-01

We have used X-ray irradiation and cell fusion to generate somatic cell hybrids containing fragments of human chromosome 10. Our experiments were directed towards isolating the region of the MEN2A gene in hybrids and to use those as the source of DNA for cloning and mapping new markers from near the MEN2A locus. A number of hybrid clones containing human sequences that are tightly linked to the MEN2A gene were identified. Some 25% of our hybrids, however, proved to contain more than one human chromosome 10-derived fragment or showed evidence of deletions and/or rearrangements. A detailed analysis of the human content of X-ray irradiation hybrids is required to assess the integrity and number of human fragments retained. Despite retention of multiple human-derived fragments, these hybrids will prove useful as cloning and mapping resources

Inclusive breakup of three-fragment weakly bound nuclei

International Nuclear Information System (INIS)

Carlson, B.V.; Frederico, T.; Hussein, M.S.

2017-01-01

The inclusive breakup of three-fragment projectiles is discussed within a four-body spectator model. Both the elastic breakup and the non-elastic breakup are obtained in a unified framework. Originally developed in the 80's for two-fragment projectiles such as the deuteron, in this paper the theory is successfully generalized to three-fragment projectiles. The expression obtained for the inclusive cross section allows the extraction of the incomplete fusion cross section, and accordingly generalizes the surrogate method to cases such as (t, p) and (t, n) reactions. It is found that two-fragment correlations inside the projectile affect in a conspicuous way the elastic breakup cross section. The inclusive non-elastic breakup cross section is calculated and is found to contain the contribution of a three-body absorption term that is also strongly influenced by the two-fragment correlations. This latter cross section contains the so-called incomplete fusion where more than one compound nuclei are formed. Our theory describes both stable weakly bound three-fragment projectiles and unstable ones such as the Borromean nuclei.

Inclusive breakup of three-fragment weakly bound nuclei

Energy Technology Data Exchange (ETDEWEB)

Carlson, B.V.; Frederico, T. [Instituto Tecnológico de Aeronáutica, DCTA, 12.228-900 São José dos Campos, SP (Brazil); Hussein, M.S., E-mail: hussein@if.usp.br [Instituto Tecnológico de Aeronáutica, DCTA, 12.228-900 São José dos Campos, SP (Brazil); Instituto de Estudos Avançados, Universidade de São Paulo, C.P. 72012, 05508-970 São Paulo, SP (Brazil); Instituto de Física, Universidade de São Paulo, C.P. 66318, 05314-970 São Paulo, SP (Brazil)

2017-04-10

The inclusive breakup of three-fragment projectiles is discussed within a four-body spectator model. Both the elastic breakup and the non-elastic breakup are obtained in a unified framework. Originally developed in the 80's for two-fragment projectiles such as the deuteron, in this paper the theory is successfully generalized to three-fragment projectiles. The expression obtained for the inclusive cross section allows the extraction of the incomplete fusion cross section, and accordingly generalizes the surrogate method to cases such as (t, p) and (t, n) reactions. It is found that two-fragment correlations inside the projectile affect in a conspicuous way the elastic breakup cross section. The inclusive non-elastic breakup cross section is calculated and is found to contain the contribution of a three-body absorption term that is also strongly influenced by the two-fragment correlations. This latter cross section contains the so-called incomplete fusion where more than one compound nuclei are formed. Our theory describes both stable weakly bound three-fragment projectiles and unstable ones such as the Borromean nuclei.

BATS, the readout control of UA1

Energy Technology Data Exchange (ETDEWEB)

Botlo, M.; Dorenbosch, J.; Jimack, M.; Szoncso, F.; Taurok, A.; Walzel, G. (European Organization for Nuclear Research, Geneva (Switzerland))

1991-04-15

A steadily rising luminosity and different readout architectures for the various detector systems of UA1 required a new data flow control to minimize the dead time. BATS, a finite state machine conceived around two microprocessors in a single VME crate, improved flexibility and reliability. Compatibility with BATS streamlined all readout branches. BATS also proved to be a valuable asset in spotting readout problems and previously undetected data flow bottlenecks. (orig.).

The UA1 VME data acquisition system

International Nuclear Information System (INIS)

Cittolin, S.

1988-01-01

The data acquisition system of a large-scale experiment such as UA1, running at the CERN proton-antiproton collider, has to cope with very high data rates and to perform sophisticated triggering and filtering in order to analyze interesting events. These functions are performed by a variety of programmable units organized in a parallel multiprocessor system whose central architecture is based on the industry-standard VME/VMXbus. (orig.)

Unmanned Aircraft Systems Traffic Management (UTM) Safely Enabling UAS Operations in Low-Altitude Airspace

Science.gov (United States)

Kopardekar, Parimal H.

2016-01-01

Unmanned Aircraft System (UAS) Traffic Management (UTM) Enabling Civilian Low-Altitude Airspace and Unmanned Aircraft System Operations What is the problem? Many beneficial civilian applications of UAS have been proposed, from goods delivery and infrastructure surveillance, to search and rescue, and agricultural monitoring. Currently, there is no established infrastructure to enable and safely manage the widespread use of low-altitude airspace and UAS operations, regardless of the type of UAS. A UAS traffic management (UTM) system for low-altitude airspace may be needed, perhaps leveraging concepts from the system of roads, lanes, stop signs, rules and lights that govern vehicles on the ground today, whether the vehicles are driven by humans or are automated. What system technologies is NASA exploring? Building on its legacy of work in air traffic management for crewed aircraft, NASA is researching prototype technologies for a UAS Traffic Management (UTM) system that could develop airspace integration requirements for enabling safe, efficient low-altitude operations. While incorporating lessons learned from the today's well-established air traffic management system, which was a response that grew out of a mid-air collision over the Grand Canyon in the early days of commercial aviation, the UTM system would enable safe and efficient low-altitude airspace operations by providing services such as airspace design, corridors, dynamic geofencing, severe weather and wind avoidance, congestion management, terrain avoidance, route planning and re-routing, separation management, sequencing and spacing, and contingency management. One of the attributes of the UTM system is that it would not require human operators to monitor every vehicle continuously. The system could provide to human managers the data to make strategic decisions related to initiation, continuation, and termination of airspace operations. This approach would ensure that only authenticated UAS could operate

The search of the top quark in the UA2' experiment

International Nuclear Information System (INIS)

Buskulic, D.

1989-05-01

We present in this thesis a preliminary analysis of the data accumulated in 1988 by the UA2' experiment at the SpantipS collider at CERN, at the centre-of-mass energy of 630 GeV. The integrated luminosity for this study is 2.5 pb -1 . It's aim is to search for a top quark, in the decay channel top giving b+electron+neutrino, producing a high transverse momentum electron and neutrino accompanied by two (proton-antiproton -- W -- top-antibottom pair) to four (proton-antiproton -- top-antitop pair) jets. Two studies have been performed: one with the accent on the good measurement of missing transverse momentum in UA2', requiring it to be above 15 GeV/c, is sensitive to top quark masses between 40 and 65 GeV/c 2 ; the other, with the accent rather on the excellent electron identification power of UA2', is sensitive to top quark masses between 30 and 50 GeV/c 2 . A detailed study of the various background processes (W+2jets, bottom-antibottom, QCD background) is also presented, followed by a preliminary discussion of the systematic errors on the various predictions. No signal was observed for top quark masses between 30 and 60 GeV/c 2 [fr

SKI2 mediates degradation of RISC 5′-cleavage fragments and prevents secondary siRNA production from miRNA targets in Arabidopsis

Science.gov (United States)

Branscheid, Anja; Marchais, Antonin; Schott, Gregory; Lange, Heike; Gagliardi, Dominique; Andersen, Stig Uggerhøj; Voinnet, Olivier; Brodersen, Peter

2015-01-01

Small regulatory RNAs are fundamental in eukaryotic and prokaryotic gene regulation. In plants, an important element of post-transcriptional control is effected by 20–24 nt microRNAs (miRNAs) and short interfering RNAs (siRNAs) bound to the ARGONAUTE1 (AGO1) protein in an RNA induced silencing complex (RISC). AGO1 may cleave target mRNAs with small RNA complementarity, but the fate of the resulting cleavage fragments remains incompletely understood. Here, we show that SKI2, SKI3 and SKI8, subunits of a cytoplasmic cofactor of the RNA exosome, are required for degradation of RISC 5′, but not 3′-cleavage fragments in Arabidopsis. In the absence of SKI2 activity, many miRNA targets produce siRNAs via the RNA-dependent RNA polymerase 6 (RDR6) pathway. These siRNAs are low-abundant, and map close to the cleavage site. In most cases, siRNAs were produced 5′ to the cleavage site, but several examples of 3′-spreading were also identified. These observations suggest that siRNAs do not simply derive from RDR6 action on stable 5′-cleavage fragments and hence that SKI2 has a direct role in limiting secondary siRNA production in addition to its function in mediating degradation of 5′-cleavage fragments. PMID:26464441

Maritime Search and Rescue via Multiple Coordinated UAS

Science.gov (United States)

2017-06-12

partitioning method uses the underlying probability distribution assumptions to place that probability near the geometric center of the partitions. There...During partitioning the known locations are accommodated, but the unaccounted for objects are placed into geometrically unfavorable conditions. The...Zeitlin, A.D.: UAS Sence and Avoid Develop- ment - the Challenges of Technology, Standards, and Certification. Aerospace Sciences Meeting including

Olefin copolymerization via reversible addition-fragmentation chain transfer

NARCIS (Netherlands)

Venkatesh, R.; Staal, B.B.P.; Klumperman, B.

2004-01-01

Successful statistical copolymn. of an a-olefin (1-octene) with an acrylate (Bu acrylate, BA) and with a methacrylate (Me methacrylate, MMA), employing reversible addn.-fragmentation chain transfer (RAFT) mediated polymn. has been accomplished

Embedding Human Expert Cognition Into Autonomous UAS Trajectory Planning.

Science.gov (United States)

Narayan, Pritesh; Meyer, Patrick; Campbell, Duncan

2013-04-01

This paper presents a new approach for the inclusion of human expert cognition into autonomous trajectory planning for unmanned aerial systems (UASs) operating in low-altitude environments. During typical UAS operations, multiple objectives may exist; therefore, the use of multicriteria decision aid techniques can potentially allow for convergence to trajectory solutions which better reflect overall mission requirements. In that context, additive multiattribute value theory has been applied to optimize trajectories with respect to multiple objectives. A graphical user interface was developed to allow for knowledge capture from a human decision maker (HDM) through simulated decision scenarios. The expert decision data gathered are converted into value functions and corresponding criteria weightings using utility additive theory. The inclusion of preferences elicited from HDM data within an automated decision system allows for the generation of trajectories which more closely represent the candidate HDM decision preferences. This approach has been demonstrated in this paper through simulation using a fixed-wing UAS operating in low-altitude environments.

The Devil's Warriors and the Light of the Sun : Contextualising Immram Curaig Ua Corra

OpenAIRE

Bekkhus, Kirsten Eivor

2013-01-01

A historical and contextual reading of the voyage tale Immram Curaig Ua Corra. Research on voyage tales in early Irish literature has earlier been centered on unveiling pagan beliefs and traditions beneath an imagined Christian surface. This tendency has rendered textual interpretation based on the voyage tales’ historical context somewhat unchartered territory. The aim of this thesis is, therefore, to read Immram Curaig Ua Corra first and foremostly as a child of its time. Certain signs ...

UAS in the NAS Air Traffic Controller Acceptability Study-1: The Effects of Horizontal Miss Distances on Simulated UAS and Manned Aircraft Encounters

Science.gov (United States)

Ghatas, Rania W.; Comstock, James R., Jr.; Consiglio, Maria C.; Chamberlain, James P.; Hoffler, Keith D.

2015-01-01

This study examined air traffic controller acceptability ratings based on the effects of differing horizontal miss distances (HMDs) for encounters between UAS and manned aircraft. In a simulation of the Dallas/Fort Worth (DFW) East-side airspace, the CAS-1 experiment at NASA Langley Research Center enlisted fourteen recently retired DFW air traffic controllers to rate well-clear volumes based on differing HMDs that ranged from 0.5 NM to 3.0 NM. The controllers were tasked with rating these HMDs from "too small" to "too excessive" on a defined, 1-5, scale and whether these distances caused any disruptions to the controller and/or to the surrounding traffic flow. Results of the study indicated a clear favoring towards a particular HMD range. Controller workload was also measured. Data from this experiment and subsequent experiments will play a crucial role in the FAA's establishment of rules, regulations, and procedures to safely and efficiently integrate UAS into the NAS.

Determination of aromatic fragment content in phenol-containing fractions of solid fuel conversion products using nuclear magnetic resonance spectroscopy

Energy Technology Data Exchange (ETDEWEB)

Kanitskaya, L.V.; Kushnarev, D.F.; Polonov, V.M.; Kalabin, G.A.

1986-03-01

Optimum conditions are determined for obtaining quantitative nuclear magnetic resonance /sup 13/C spectra of fragments in phenol-containing fraction of coal products. Causes are analyzed of residual signals in spectra of un-protonized carbon atoms. The tests were carried out on: low-temperature carbonization tar and phenol fraction obtained during medium-temperature coking of Cherenkhovskii coal (which contains 84.13% C; 9.68% H; 1.23% S; 4.96% O); products of tar hydrogenation with various phenol content; standard phenol mixture. It was found that quantitative determination of aromatic fraction content in coal conversion products and other phenol- and amine-containing complex mixtures, using NMR spectroscopy requires the addition of dimethylsulfide or acetone in order to suppress specific interactions of phenols (amines) with relaxants and obtain quantitative subspectra of Tertiary and Quaternary aromatic carbon atoms. 16 references.

Interoperability between OPC UA and AutomationML

OpenAIRE

Henßen, Robert; Schleipen, Miriam

2014-01-01

OPC UA (OPC Unified Architecture) is a platform-independent standard series (IEC 62541) [1], [2] for communication of industrial automation devices and systems. The OPC Unified Architecture is an advanced communication technology for process control. Certainly the launching costs for the initial information model are quite high. AutomationML (Automation Markup Language) is an upcoming open standard series (IEC 62714) [3], [4] for describing production plants or plant components. The goal of t...

Extraction of 16th Century Calender Fragments

DEFF Research Database (Denmark)

Holck, Jakob Povl; Etheridge, Christian

at the Cultural Heritage & Archaeometric Research Team, SDU. Upon finding medieval manuscript fragments in the university library’s special collections, scholars at the Centre for Medieval Literature are consulted. In most cases, digital pictures of the finds will circulate in the international community...... fragments may require extensive use of Big Data and other forms of analysis in order to be identified. Usually, the university library prefers not to remove the fragments from their “fragment carriers”. In order to read fragments that are only partially visible or invisible, x-ray technology may be deployed...... of medieval scholars. Thousands of 16th and 17th Century books are stored in the University Library of Southern Denmark. One out of five of these books is expected to contain medieval manuscript fragments or fragments of rare prints, e.g. incunabula....

Aerodynamic study, design and construction of a Blended Wing Body (BWB) Unmanned Aircraft (UA)

OpenAIRE

De Toro Diaz, Aleix

2015-01-01

During this project a Blended Wing Body (BWB) UA (Unmanned Aircraft) model is built. BWBs are a combination of a common airplane with tail control surfaces and a flying wing. BWBs lack tail control surfaces, which makes its design to be very different and more complex regarding stability. To first start the BWB design, some research has been done about the basic parameters of the BWB designs. Moreover, different airfoils are considered to improve the stability of the UA. Two designs are creat...

Plasminogen fragments K 1-3 and K 5 bind to different sites in fibrin fragment DD.

Science.gov (United States)

Grinenko, T V; Kapustianenko, L G; Yatsenko, T A; Yusova, O I; Rybachuk, V N

2016-01-01

Specific plasminogen-binding sites of fibrin molecule are located in Аα148-160 regions of C-terminal domains. Plasminogen interaction with these sites initiates the activation process of proenzyme and subsequent fibrin lysis. In this study we investigated the binding of plasminogen fragments K 1-3 and K 5 with fibrin fragment DD and their effect on Glu-plasminogen interaction with DD. It was shown that the level of Glu-plasminogen binding to fibrin fragment DD is decreased by 50-60% in the presence of K 1-3 and K 5. Fragments K 1-3 and K 5 have high affinity to fibrin fragment DD (Kd is 0.02 for K 1-3 and 0.054 μМ for K 5). K 5 interaction is independent and K 1-3 is partly dependent on C-terminal lysine residues. K 1-3 interacts with complex of fragment DD-immobilized K 5 as well as K 5 with complex of fragment DD-immobilized K 1-3. The plasminogen fragments do not displace each other from binding sites located in fibrin fragment DD, but can compete for the interaction. The results indicate that fibrin fragment DD contains different binding sites for plasminogen kringle fragments K 1-3 and K 5, which can be located close to each other. The role of amino acid residues of fibrin molecule Аα148-160 region in interaction with fragments K 1-3 and K 5 is discussed.

General Use of UAS in EW Environment-EW Concepts and Tactics for Single or Multiple UAS Over the Net-Centric Battlefield

Science.gov (United States)

2009-09-01

By Tiger and Flight Plan ..........................................193 Figure 124. Patriot to Be Destroyed By Puma and Flight Plan...systems, and its effectiveness depends on its ability to lock onto the heat source of low-flying fixed- and rotary-wing aircraft targets [33...different types of engines for different types of UAS: turbofans, two stroke , piston, rotary, turboprop, push and pull, electric. The lighter, smaller

A Family of Well-Clear Boundary Models for the Integration of UAS in the NAS

Science.gov (United States)

Munoz, Cesar A.; Narkawicz, Anthony; Chamberlain, James; Consiglio, Maria; Upchurch, Jason

2014-01-01

The FAA-sponsored Sense and Avoid Workshop for Unmanned Aircraft Systems (UAS) defines the concept of sense and avoid for remote pilots as "the capability of a UAS to remain well clear from and avoid collisions with other airborne traffic." Hence, a rigorous definition of well clear is fundamental to any separation assurance concept for the integration of UAS into civil airspace. This paper presents a family of well-clear boundary models based on the TCAS II Resolution Advisory logic. For these models, algorithms that predict well-clear violations along aircraft current trajectories are provided. These algorithms are analogous to conflict detection algorithms but instead of predicting loss of separation, they predict whether well-clear violations will occur during a given lookahead time interval. Analytical techniques are used to study the properties and relationships satisfied by the models.

Intelligent Hardware-Enabled Sensor and Software Safety and Health Management for Autonomous UAS

Science.gov (United States)

Rozier, Kristin Y.; Schumann, Johann; Ippolito, Corey

2015-01-01

Unmanned Aerial Systems (UAS) can only be deployed if they can effectively complete their mission and respond to failures and uncertain environmental conditions while maintaining safety with respect to other aircraft as well as humans and property on the ground. We propose to design a real-time, onboard system health management (SHM) capability to continuously monitor essential system components such as sensors, software, and hardware systems for detection and diagnosis of failures and violations of safety or performance rules during the ight of a UAS. Our approach to SHM is three-pronged, providing: (1) real-time monitoring of sensor and software signals; (2) signal analysis, preprocessing, and advanced on-the- y temporal and Bayesian probabilistic fault diagnosis; (3) an unobtrusive, lightweight, read-only, low-power hardware realization using Field Programmable Gate Arrays (FPGAs) in order to avoid overburdening limited computing resources or costly re-certi cation of ight software due to instrumentation. No currently available SHM capabilities (or combinations of currently existing SHM capabilities) come anywhere close to satisfying these three criteria yet NASA will require such intelligent, hardwareenabled sensor and software safety and health management for introducing autonomous UAS into the National Airspace System (NAS). We propose a novel approach of creating modular building blocks for combining responsive runtime monitoring of temporal logic system safety requirements with model-based diagnosis and Bayesian network-based probabilistic analysis. Our proposed research program includes both developing this novel approach and demonstrating its capabilities using the NASA Swift UAS as a demonstration platform.

Cloning and expression of cell wall acid invertase gene fragment ...

African Journals Online (AJOL)

A fragment of invertase gene containing catalytic sites of cysteine was cloned from poinsettia (Euphorbia pulcherrima wild.) by using the polymerase chain reaction (PCR) method. The length of the fragment was 521 bp, encoding 173 amino acids and containing a part of open reading frames, but no intron. It had a high ...

Georeferencing UAS Derivatives Through Point Cloud Registration with Archived Lidar Datasets

Science.gov (United States)

Magtalas, M. S. L. Y.; Aves, J. C. L.; Blanco, A. C.

2016-10-01

Georeferencing gathered images is a common step before performing spatial analysis and other processes on acquired datasets using unmanned aerial systems (UAS). Methods of applying spatial information to aerial images or their derivatives is through onboard GPS (Global Positioning Systems) geotagging, or through tying of models through GCPs (Ground Control Points) acquired in the field. Currently, UAS (Unmanned Aerial System) derivatives are limited to meter-levels of accuracy when their generation is unaided with points of known position on the ground. The use of ground control points established using survey-grade GPS or GNSS receivers can greatly reduce model errors to centimeter levels. However, this comes with additional costs not only with instrument acquisition and survey operations, but also in actual time spent in the field. This study uses a workflow for cloud-based post-processing of UAS data in combination with already existing LiDAR data. The georeferencing of the UAV point cloud is executed using the Iterative Closest Point algorithm (ICP). It is applied through the open-source CloudCompare software (Girardeau-Montaut, 2006) on a `skeleton point cloud'. This skeleton point cloud consists of manually extracted features consistent on both LiDAR and UAV data. For this cloud, roads and buildings with minimal deviations given their differing dates of acquisition are considered consistent. Transformation parameters are computed for the skeleton cloud which could then be applied to the whole UAS dataset. In addition, a separate cloud consisting of non-vegetation features automatically derived using CANUPO classification algorithm (Brodu and Lague, 2012) was used to generate a separate set of parameters. Ground survey is done to validate the transformed cloud. An RMSE value of around 16 centimeters was found when comparing validation data to the models georeferenced using the CANUPO cloud and the manual skeleton cloud. Cloud-to-cloud distance computations of

Safely Enabling Civilian Unmanned Aerial System (UAS) Operations in Low-Altitude Airspace by Unmanned Aerial System Traffic Management (UTM)

Science.gov (United States)

Kopardekar, Parimal Hemchandra

2015-01-01

Many UAS will operate at lower altitude (Class G, below 2000 feet). There is an urgent need for a system for civilian low-altitude airspace and UAS operations. Stakeholders want to work with NASA to enable safe operations.

Integration of sUAS Imagery and Atmospheric Data Collection for Improved Agricultural Greenhouse Gas Emissions Monitoring

Science.gov (United States)

Barbieri, L.; Adair, C.; Galford, G. L.; Wyngaard, J.

2017-12-01

We present on a full season of low-cost sUAS agricultural monitoring for improved GHG emissions accounting and mitigation. Agriculture contributes 10-12% of global anthropogenic GHG emissions, and roughly half are from agricultural soils. A variety of land management strategies can be implemented to reduce GHG emissions, but agricultural lands are complex and heterogenous. Nutrient cycling processes that ultimately regulate GHG emission rates are affected by environmental and management dynamics that vary spatially and temporally (e.g. soil properties, manure spreading). Thus, GHG mitigation potential is also variable, and determining best practices for mitigation is challenging, especially considering potential conflicting pressure to manage agricultural lands for other objectives (e.g. decrease agricultural runoff). Monitoring complexity from agricultural lands is critical for regional GHG accounting and decision making, but current methods (e.g., static chambers) are time intensive, expensive, and use in-situ equipment. These methods lack the spatio-temporal flexibility necessary to reduce the high uncertainty in regional emissions estimates, while traditional remote sensing methods often do not provide adequate spatio-temporal resolution for robust field-level monitoring. Small Unmanned Aerial Systems (sUAS) provide the range and the rapid response data collection needed to monitor key variables on the landscape (imagery) and from the atmosphere (CO2 concentrations), and can provide ways to bridge between in-situ and remote sensing data. Initial results show good agreement between sUAS CO2 sensors with more traditional equipment, and at a fraction of the cost. We present results from test flights over managed agricultural landscapes in Vermont, showcasing capabilities from both sUAS imagery and atmospheric data collected from on-board sensors (CO2, PTH). We then compare results from two different in-flight data collection methods: Vertical Profile and

In silico fragment-based drug discovery: setup and validation of a fragment-to-lead computational protocol using S4MPLE.

Science.gov (United States)

Hoffer, Laurent; Renaud, Jean-Paul; Horvath, Dragos

2013-04-22

This paper describes the use and validation of S4MPLE in Fragment-Based Drug Design (FBDD)--a strategy to build drug-like ligands starting from small compounds called fragments. S4MPLE is a conformational sampling tool based on a hybrid genetic algorithm that is able to simulate one (conformer enumeration) or more molecules (docking). The goal of the current paper is to show that due to the judicious design of genetic operators, S4MPLE may be used without any specific adaptation as an in silico FBDD tool. Such fragment-to-lead evolution involves either growing of one or linking of several fragment-like binder(s). The native ability to specifically "dock" a substructure that is covalently anchored to its target (here, some prepositioned fragment formally part of the binding site) enables it to act like dedicated de novo builders and differentiates it from most classical docking tools, which may only cope with non-covalent interactions. Besides, S4MPLE may address growing/linking scenarios involving protein site flexibility, and it might also suggest "growth" moves by bridging the ligand to the site via water-mediated interactions if H2O molecules are simply appended to the input files. Therefore, the only development overhead required to build a virtual fragment→ligand growing/linking strategy based on S4MPLE were two chemoinformatics programs meant to provide a minimalistic management of the linker library. The first creates a duplicate-free library by fragmenting a compound database, whereas the second builds new compounds, attaching chemically compatible linkers to the starting fragments. S4MPLE is subsequently used to probe the optimal placement of the linkers within the binding site, with initial restraints on atoms from initial fragments, followed by an optimization of all kept poses after restraint removal. Ranking is mainly based on two criteria: force-field potential energy and RMSD shifts of the original fragment moieties. This strategy was applied to

UAS Air Traffic Controller Acceptability Study-2: Effects of Communications Delays and Winds in Simulation

Science.gov (United States)

Comstock, James R., Jr.; Ghatas, Rania W.; Consiglio, Maria C.; Chamberlain, James P.; Hoffler, Keith D.

2016-01-01

This study evaluated the effects of Communications Delays and Winds on Air Traffic Controller ratings of acceptability of horizontal miss distances (HMDs) for encounters between UAS and manned aircraft in a simulation of the Dallas-Ft. Worth East-side airspace. Fourteen encounters per hour were staged in the presence of moderate background traffic. Seven recently retired controllers with experience at DFW served as subjects. Guidance provided to the UAS pilots for maintaining a given HMD was provided by information from self-separation algorithms displayed on the Multi-Aircraft Simulation System. Winds tested did not affect the acceptability ratings. Communications delays tested included 0, 400, 1200, and 1800 msec. For longer communications delays, there were changes in strategy and communications flow that were observed and reported by the controllers. The aim of this work is to provide useful information for guiding future rules and regulations applicable to flying UAS in the NAS.

Assessing Lodging Severity over an Experimental Maize (Zea mays L. Field Using UAS Images

Directory of Open Access Journals (Sweden)

Tianxing Chu

2017-09-01

Full Text Available Lodging has been recognized as one of the major destructive factors for crop quality and yield, resulting in an increasing need to develop cost-efficient and accurate methods for detecting crop lodging in a routine manner. Using structure-from-motion (SfM and novel geospatial computing algorithms, this study investigated the potential of high resolution imaging with unmanned aircraft system (UAS technology for detecting and assessing lodging severity over an experimental maize field at the Texas A&M AgriLife Research and Extension Center in Corpus Christi, Texas, during the 2016 growing season. The method was proposed to not only detect the occurrence of lodging at the field scale, but also to quantitatively estimate the number of lodged plants and the lodging rate within individual rows. Nadir-view images of the field trial were taken by multiple UAS platforms equipped with consumer grade red, green, and blue (RGB, and near-infrared (NIR cameras on a routine basis, enabling a timely observation of the plant growth until harvesting. Models of canopy structure were reconstructed via an SfM photogrammetric workflow. The UAS-estimated maize height was characterized by polygons developed and expanded from individual row centerlines, and produced reliable accuracy when compared against field measures of height obtained from multiple dates. The proposed method then segmented the individual maize rows into multiple grid cells and determined the lodging severity based on the height percentiles against preset thresholds within individual grid cells. From the analysis derived from this method, the UAS-based lodging results were generally comparable in accuracy to those measured by a human data collector on the ground, measuring the number of lodging plants (R2 = 0.48 and the lodging rate (R2 = 0.50 on a per-row basis. The results also displayed a negative relationship of ground-measured yield with UAS-estimated and ground-measured lodging rate.

Diphtheria toxin- and Pseudomonas A toxin-mediated apoptosis. ADP ribosylation of elongation factor-2 is required for DNA fragmentation and cell lysis and synergy with tumor necrosis factor-alpha.

Science.gov (United States)

Morimoto, H; Bonavida, B

1992-09-15

We have reported that diphtheria toxin (DTX) mediates target cell lysis and intranucleosomal DNA fragmentation (apoptosis) and also synergizes with TNF-alpha. In this paper, we examined which step in the pathway of DTX-mediated inhibition of protein synthesis was important for induction of cytolytic activity and for synergy. Using a DTX-sensitive tumor cell line, we first examined the activity of the mutant CRM 197, which does not catalyze the ADP ribosylation of elongation factor-2 (EF-2). CRM 197 was not cytolytic for target cells and did not mediate intranucleosomal DNA fragmentation of viable cells. The failure of CRM 197 to mediate target cell lysis suggested that the catalytic activity of DTX is prerequisite for target cell lysis. This was corroborated by demonstrating that MeSAdo, which blocks the biosynthesis of diphthamide, inhibited DTX-mediated protein synthesis inhibition and also blocked target cell lysis. Furthermore, the addition of nicotinamide, which competes with NAD+ on the DTX action site of EF-2, also blocked DTX-mediated lysis. These findings suggest that ADP-ribosylation of EF-2 may be a necessary step in the pathway leading to target cell lysis. In contrast to the sensitive line, the SKOV-3 tumor cell line is sensitive to protein synthesis inhibition by DTX but is not susceptible to cytolysis and apoptosis by DTX. Thus, protein synthesis inhibition by DTX is not sufficient to mediate target cell lysis. The synergy in cytotoxicity obtained with the combination of DTX and TNF-alpha was examined in order to determine the pathway mediated by DTX in synergy. Like the direct lysis by DTX, synergy was significantly reduced by MeSAdo and by nicotinamide. Furthermore, synergy was not observed with combination of CRM 197 and TNF-alpha. These results demonstrate that, in synergy, DTX may utilize the same pathway required for its cytolytic activity. Pseudomonas aeruginosa exotoxin shared most the properties shown for DTX. Altogether, these findings

Fragmentation in the branching coral Acropora palmata (Lamarck): growth, survivorship, and reproduction of colonies and fragments.

Science.gov (United States)

Lirman

2000-08-23

Acropora palmata, a branching coral abundant on shallow reef environments throughout the Caribbean, is susceptible to physical disturbance caused by storms. Accordingly, the survivorship and propagation of this species are tied to its capability to recover after fragmentation. Fragments of A. palmata comprised 40% of ramets within populations that had experienced recent storms. While the survivorship of A. palmata fragments was not directly related to the size of fragments, removal of fragments from areas where they settled was influenced by size. Survivorship of fragments was also affected by type of substratum; the greatest mortality (58% loss within the first month) was observed on sand, whereas fragments placed on top of live colonies of A. palmata fused to the underlying tissue and did not experience any losses. Fragments created by Hurricane Andrew on a Florida reef in August 1992 began developing new growth (proto-branches) 7 months after the storm. The number of proto-branches on fragments was dependent on size, but growth was not affected by the size of fragments. Growth-rates of proto-branches increased exponentially with time (1.7 cm year(-1) for 1993-1994, 2.7 cm year(-1) for 1994-1995, 4.2 cm year(-1) for 1995-1996, and 6.5 cm year(-1) for 1996-1997), taking over 4 years for proto-branches to achieve rates comparable to those of adult colonies on the same reef (6.9 cm year(-1)). In addition to the initial mortality and reduced growth-rates, fragmentation resulted in a loss of reproductive potential. Neither colonies that experienced severe fragmentation nor fragments contained gametes until 4 years after the initial damage. Although A. palmata may survive periodic fragmentation, the long-term effects of this process will depend ultimately on the balance between the benefits and costs of this process.

Developing a Ruggedized User-Friendly UAS for Monitoring Volcanic Emissions

Science.gov (United States)

Wardell, L. J.; Elston, J. S.; Stachura, M.

2017-12-01

Using lessons learned from a history of airborne volcano measurements and a range of UAS R&D, a reliable and ruggedized UAS is being developed specifically for volcano monitoring and response. A key feature is the user interface (UI) that allows for a menu of automated flight plans that will account for terrain and sensor requirements. Due to variation in response times of miniaturized airborne the sensors, flight plan options are extended to account for sensor lag when needed. By automating such complicating variables into the UI, the amount of background and training needed for operation is further minimized. Payload options include simultaneous in situ gas and particle sensors combined with downward-looking imagers to provide a wide range of data products. Currently under development by Black Swift Technologies, the latest updates and test results will be presented. Specifications of the Superswift airframe include a 6,000 m flight ceiling, 2.4 kg payload capacity, and 2 hr endurance.

Synthesis and properties of 1,3-dioxo-1H-inden-2(3H)-ylidene fragment and (3-(dicyanomethylene)-5,5-dimethylcyclohex-1-enyl)vinyl fragment containing derivatives of azobenzene for holographic recording materials

Science.gov (United States)

Zarins, Elmars; Kokars, Valdis; Ozols, Andris; Augustovs, Peteris

2011-06-01

New glassy 1,3-dioxo-1H-inden-2(3H)-ylidene fragment und (3-(dicyanomethylene)-5,5-dimethylcyclohex-1-enyl)vinyl fragment containing push-pull type derivatives of azobenzene able to create thin layers have been synthesized. Thin films of synthesized glasses for holographic recording were prepared using spin coating technique from saturated chloroform solution. Holographic grating recording in films of 6a-b, 7 and 12 has been experimentally studied at 633 and 532 nm in both transmission and reflection modes with p-p recording beam polarizations. The film 12 was found to be the most efficient at both wavelengths in transmission mode exhibiting the maximum self-diffraction efficiency of 9.9% at 633 nm, and 15.3% at 532 nm. The film of 6a was the most efficient in reflection mode with the maximum selfdiffraction efficiency of about 3%.

Nonlinear transient responses of beams and rings to impulse loading or fragment impact

International Nuclear Information System (INIS)

Witmer, E.A.; Stagliano, T.R.; Rodal, J.J.A.

1977-01-01

The present paper is concerned with a very limited part of the cited fragment threat; namely, fragments from high speed rotating machinery such as (1) aircraft engine rotors and (2) stationary power plant turbine rotors. Further, it is assumed that the structures intended to contain or control these fragments consist of initially-isotropic elastic-plastic metals. Certain potential containment/control (C/C) structures behave in a planar (or two-dimensional) fashion while other fragment-attacked C/C structures will undergo general three-dimensional deformations. Predictions for only the former category of fragment-attacked structures are discussed in the present paper. Pertinent experimental data discussed here on fragment-attacked structures include (a) steel-sphere impact data involving beam targets and (b) engine rotor fragment impact against a steel containment ring. In all of these cases large-deflection, elastic-plastic transient structural response occur. The governing equations employed are presented in the present analysis to predict the responses of protective (metal) structures to engine-rotor-fragment impact. The protective structure is intended either to contain or to deflect the attacking fragments away from important regions; large-deflection, elasic-plastic structural response is expected because these protective structures must have the least feasible weight. Concise geometric and assumed-displacement-field descriptions of the several types of finite elements to be utilized in subsequent examples are given, together with several categories of strain displacement relations. Both low- and higher-order elements are discussed

Fragmentation of the C60 molecule in collision with light ions studied by a multi-correlation technique. Cross-sections, electron spectroscopy; Fragmentation de la molecule C60 par impact d'ions legers etudiee en multicorrelation. Sections efficaces, spectroscopie d'electrons

Energy Technology Data Exchange (ETDEWEB)

Rentenier, A

2004-04-01

A quantitative study of the C60 fullerenes fragmentation in collision with light ions (H{sub n}{sup +} with n=1,2,3, He{sup q+} with q=1,2) in the velocity range 0,1 - 2,3 u.a.) is presented. The multi-correlation technique, developed between fragment ions and electrons with well defined energy, has enlightened some of the dependences and properties of fragmentation mechanisms (cross sections, electron spectroscopy, size distributions, kinetic energy of fragment ions, Campi's scatter plot, activation energies). The deposited energy hence appeared as an important parameter. Cross sections have been measured, for the first time, for all the collisional processes. Ionisation and capture only depends on the collision velocity. On the other hand, scaling laws with the deposited energy have been observed for the cross sections of multifragmentation, which depends on the collision energy and the nature of the projectile. The deposited energy has also been found as an essential parameter to understand the evolution of the charged fragment size distributions. The electron spectroscopy, achieved at an emission angle of 35 degrees, showed spectra peaked at important energies (from 5 to 20 eV). The spectra shape depends on the collision velocity. A first theoretical analysis points out the link between the observed energy distribution and the presence of a centrifugal potential barrier. Finally, correlation experiments between produced ions and electron energy reveal that electron energy increases with internal energy. (author)

Dual Fragment Impact of PBX Charges

Science.gov (United States)

Haskins, Peter; Briggs, Richard; Leeming, David; White, Nathan; Cheese, Philip; DE&S MoD UK Team; Ordnance Test Solutions Ltd Team

2017-06-01

Fragment impact can pose a significant hazard to many systems containing explosives or propellants. Testing for this threat is most commonly carried out using a single fragment. However, it can be argued that an initial fragment strike (or strikes) could sensitise the energetic material to subsequent impacts, which may then lead to a more violent reaction than would have been predicted based upon single fragment studies. To explore this potential hazard we have developed the capability to launch 2 fragments from the same gun at a range of velocities, and achieve impacts on an acceptor charge with good control over the spatial and temporal separation of the strikes. In this paper we will describe in detail the experimental techniques we have used, both to achieve the dual fragment launch and observe the acceptor charge response. In addition, we will describe the results obtained against PBX filled explosive targets; discuss the mechanisms controlling the target response and their significance for vulnerability assessment. Results of these tests have clearly indicated the potential for detonation upon the second strike, at velocities well below those needed for shock initiation by a single fragment.

Predicting "Hot" and "Warm" Spots for Fragment Binding.

Science.gov (United States)

Rathi, Prakash Chandra; Ludlow, R Frederick; Hall, Richard J; Murray, Christopher W; Mortenson, Paul N; Verdonk, Marcel L

2017-05-11

Computational fragment mapping methods aim to predict hotspots on protein surfaces where small fragments will bind. Such methods are popular for druggability assessment as well as structure-based design. However, to date researchers developing or using such tools have had no clear way of assessing the performance of these methods. Here, we introduce the first diverse, high quality validation set for computational fragment mapping. The set contains 52 diverse examples of fragment binding "hot" and "warm" spots from the Protein Data Bank (PDB). Additionally, we describe PLImap, a novel protocol for fragment mapping based on the Protein-Ligand Informatics force field (PLIff). We evaluate PLImap against the new fragment mapping test set, and compare its performance to that of simple shape-based algorithms and fragment docking using GOLD. PLImap is made publicly available from https://bitbucket.org/AstexUK/pli .

U.S. Army Unmanned Aircraft Systems (UAS) - A Historical Perspective to Identifying and Understanding Stakeholder Relationships

Science.gov (United States)

2014-06-01

U.S. Army (USA) to train Nike anti-aircraft missile crews and others through the 1970s. Mach 2 UAV targets consisted of several prototypes such as...manufacturers with the largest share of the global UAS market include General Atomics (20.4 percent), Northrop Grumman (18.9 percent), Boeing (1.5... mix of both manned and unmanned aircraft systems. By combining advanced sensors, tactical RSTA, MUM teaming of UAS, attack and reconnaissance

Fragger: a protein fragment picker for structural queries.

Science.gov (United States)

Berenger, Francois; Simoncini, David; Voet, Arnout; Shrestha, Rojan; Zhang, Kam Y J

2017-01-01

Protein modeling and design activities often require querying the Protein Data Bank (PDB) with a structural fragment, possibly containing gaps. For some applications, it is preferable to work on a specific subset of the PDB or with unpublished structures. These requirements, along with specific user needs, motivated the creation of a new software to manage and query 3D protein fragments. Fragger is a protein fragment picker that allows protein fragment databases to be created and queried. All fragment lengths are supported and any set of PDB files can be used to create a database. Fragger can efficiently search a fragment database with a query fragment and a distance threshold. Matching fragments are ranked by distance to the query. The query fragment can have structural gaps and the allowed amino acid sequences matching a query can be constrained via a regular expression of one-letter amino acid codes. Fragger also incorporates a tool to compute the backbone RMSD of one versus many fragments in high throughput. Fragger should be useful for protein design, loop grafting and related structural bioinformatics tasks.

Using UAS Hyperspatial RGB Imagery for Identifying Beach Zones along the South Texas Coast

Directory of Open Access Journals (Sweden)

Lihong Su

2017-02-01

Full Text Available Shoreline information is fundamental for understanding coastal dynamics and for implementing environmental policy. The analysis of shoreline variability usually uses a group of shoreline indicators visibly discernible in coastal imagery, such as the seaward vegetation line, wet beach/dry beach line, and instantaneous water line. These indicators partition a beach into four zones: vegetated land, dry sand or debris, wet sand, and water. Unmanned aircraft system (UAS remote sensing that can acquire imagery with sub-decimeter pixel size provides opportunities to map these four beach zones. This paper attempts to delineate four beach zones based on UAS hyperspatial RGB (Red, Green, and Blue imagery, namely imagery of sub-decimeter pixel size, and feature textures. Besides the RGB images, this paper also uses USGS (the United States Geological Survey Munsell HSV (Hue, Saturation, and Value and CIELUV (the CIE 1976 (L*, u*, v* color space images transformed from an RGB image. The four beach zones are identified based on the Gray Level Co-Occurrence Matrix (GLCM and Local Binary Pattern (LBP textures. Experiments were conducted with South Padre Island photos acquired by a Nikon D80 camera mounted on the US-16 UAS during March 2014. The results show that USGS Munsell hue can separate land and water reliably. GLCM and LBP textures can slightly improve classification accuracies by both unsupervised and supervised classification techniques. The experiments also indicate that we could reach acceptable results on different photos while using training data from another photo for site-specific UAS remote sensing. The findings imply that parallel processing of classification is feasible.

Functional Requirements Document for HALE UAS Operations in the NAS: Step 1. Version 3

Science.gov (United States)

2006-01-01

The purpose of this Functional Requirements Document (FRD) is to compile the functional requirements needed to achieve the Access 5 Vision of "operating High Altitude, Long Endurance (HALE) Unmanned Aircraft Systems (UAS) routinely, safely, and reliably in the national airspace system (NAS)" for Step 1. These functional requirements could support the development of a minimum set of policies, procedures and standards by the Federal Aviation Administration (FAA) and various standards organizations. It is envisioned that this comprehensive body of work will enable the FAA to establish and approve regulations to govern safe operation of UAS in the NAS on a routine or daily "file and fly" basis. The approach used to derive the functional requirements found within this FRD was to decompose the operational requirements and objectives identified within the Access 5 Concept of Operations (CONOPS) into the functions needed to routinely and safely operate a HALE UAS in the NAS. As a result, four major functional areas evolved to enable routine and safe UAS operations for an on-demand basis in the NAS. These four major functions are: Aviate, Navigate, Communicate, and Avoid Hazards. All of the functional requirements within this document can be directly traceable to one of these four major functions. Some functions, however, are traceable to several, or even all, of these four major functions. These cross-cutting functional requirements support the "Command / Control: function as well as the "Manage Contingencies" function. The requirements associated to these high-level functions and all of their supporting low-level functions are addressed in subsequent sections of this document.

Nonlinear transient responses of beams and rings to impulse loading or fragment impact

International Nuclear Information System (INIS)

Witmer, E.A.; Stagliano, T.R.; Rodal, J.J.A.

1977-01-01

Nuclear power plant protective structures may be subjected to various external missiles such as aircraft and tornado-generated missiles: telephone poles, planks, pipes, rods, automobiles, and other blown vehicles. Also, 'internally-generated missiles' such as fragments from powerplant rotors and aircraft engine rotors may impact protective structures. The present paper is concerned with a very limited part of the cited fragment threat; namely, fragments from high speed rotating machinery such as (1) aircraft engine rotors and (2) stationary power plant turbine rotors. Further, it is assumed that the structures intended to contain or control these fragments consist of initially-isotopic elastic-plastic metals. Certain potential containment/control (C/C) structures behave in a planar (or two-dimensional) fashion while other fragment-attacked C/C structures will undergo general three-dimensional deformations. Predictions for only the former category of fragment-attacked structures are discussed in the present paper. Pertinent experimental data discussed on fragment-attacked structures include (a) steel-sphere impact data involving beam targets and (b) engine rotor fragment impact against a steel containment ring. In all of these cases large-deflection, elastic-plastic transient structural responses occur. (Auth.)

Assessing the disturbance potential of small unoccupied aircraft systems (UAS on gray seals (Halichoerus grypus at breeding colonies in Nova Scotia, Canada

Directory of Open Access Journals (Sweden)

Lauren Arona

2018-03-01

Full Text Available The use of small unoccupied aircraft systems (UAS for ecological studies and wildlife population assessments is increasing. These methods can provide significant benefits in terms of costs and reductions in human risk, but little is known if UAS-based approaches cause disturbance of animals during operations. To address this knowledge gap, we conducted a series of UAS flights at gray seal breeding colonies on Hay and Saddle Islands in Nova Scotia, Canada. Using a small fixed-wing UAS, we assessed both immediate and short-term effects of surveys using sequential image analysis and between-flight seal counts in ten, 50 m2 random quadrats at each colony. Counts of adult gray seals and young-of-the-year animals between first and second flights revealed no changes in abundance in quadrats (matched pair t-test p > 0.69 and slopes approaching 1 for linear regression comparisons (r2 > 0.80. Sequential image analysis revealed no changes in orientation or posture of imaged animals. We also assessed the acoustic properties of the small UAS in relation to low ambient noise conditions using sound equivalent level (Leq measurements with a calibrated U-MIK 1 and a 1/3 octave band soundscape approach. The results of Leq measurements indicate that small fixed-wing UAS are quiet, with most energy above 160 Hz, and that levels across 1/3 octave bands do not greatly exceed ambient acoustic measurements in a quiet field during operations at standard survey altitudes. As such, this platform is unlikely to acoustically disturb gray seals at breeding colonies during population surveys. The results of the present study indicate that the effects of small fixed-wing UAS on gray seals at breeding colonies are negligible, and that fixed-wing UAS-based approaches should be considered amongst best practices for assessing gray seal colonies.

Synthesis of naturally occurring iminosugars from D-fructose by the use of a zinc-mediated fragmentation reaction

DEFF Research Database (Denmark)

Lauritsen, Anne; Madsen, Robert

2006-01-01

A short synthesis of 1,4-dideoxy-1,4-imino-D-arabinitol (DAB) and a formal synthesis of australine are described. In both cases, D-fructose is employed as the starting material and converted into a protected methyl 6-deoxy-6-iodo-furanoside. Zinc-mediated fragmentation produces an unsaturated...... ketone which serves as a key building block for both syntheses. Ozonolysis, reductive amination with benzylamine and deprotection affordfs 1,4-dideoxy-1,4-imino-D-arabinitol in only 7 steps and 11% overall yield from D-fructose. Alternatively, reductive amination with homoallylamine, ring......-closing metathesis and protecting group manipulations give rise to an intermediate which can be converted into australine in 3 steps. The intermediate is prepared by two different strategies both of which use a total of 9 steps. The first strategy utilizes benzyl ethers for protection of fructose while the second...

Combining Cluster Analysis and Small Unmanned Aerial Systems (sUAS) for Accurate and Low-cost Bathymetric Surveying

Science.gov (United States)

Maples, B. L.; Alvarez, L. V.; Moreno, H. A.; Chilson, P. B.; Segales, A.

2017-12-01

Given that classical in-situ direct surveying for geomorphological subsurface information in rivers is time-consuming, labor-intensive, costly, and often involves high-risk activities, it is obvious that non-intrusive technologies, like UAS-based, LIDAR-based remote sensing, have a promising potential and benefits in terms of efficient and accurate measurement of channel topography over large areas within a short time; therefore, a tremendous amount of attention has been paid to the development of these techniques. Over the past two decades, efforts have been undertaken to develop a specialized technique that can penetrate the water body and detect the channel bed to derive river and coastal bathymetry. In this research, we develop a low-cost effective technique for water body bathymetry. With the use of a sUAS and a light-weight sonar, the bathymetry and volume of a small reservoir have been surveyed. The sUAS surveying approach is conducted under low altitudes (2 meters from the water) using the sUAS to tow a small boat with the sonar attached. A cluster analysis is conducted to optimize the sUAS data collection and minimize the standard deviation created by under-sampling in areas of highly variable bathymetry, so measurements are densified in regions featured by steep slopes and drastic changes in the reservoir bed. This technique provides flexibility, efficiency, and free-risk to humans while obtaining high-quality information. The irregularly-spaced bathymetric survey is then interpolated using unstructured Triangular Irregular Network (TIN)-based maps to avoid re-gridding or re-sampling issues.

'Sold by our own shadow' Human detection in uas based boundary ...

African Journals Online (AJOL)

M.S

detection alert system suitable for use at border controls that is based on UAS .... via a sms gateway to the ground patrol at border areas who can then verify ... transmission through the facilitation of a file transfer protocol (FTP) transmitter.

A new location to split Cre recombinase for protein fragment complementation.

Science.gov (United States)

Rajaee, Maryam; Ow, David W

2017-11-01

We have previously described a recombinase-mediated gene stacking system in which the Cre recombinase is used to remove lox-site flanked DNA no longer needed after each round of Bxb1 integrase-mediated site-specific integration. The Cre recombinase can be conveniently introduced by hybridization with a cre-expressing plant. However, maintaining an efficient cre-expressing line over many generations can be a problem, as high production of this DNA-binding protein might interfere with normal chromosome activities. To counter this selection against high Cre activity, we considered a split-cre approach, in which Cre activity is reconstituted after separate parts of Cre are brought into the same genome by hybridization. To insure that the recombinase-mediated gene stacking system retains its freedom to operate, we tested for new locations to split Cre into complementing fragments. In this study, we describe testing four new locations for splitting the Cre recombinase for protein fragment complementation and show that the two fragments of Cre split between Lys244 and Asn245 can reconstitute activity that is comparable to that of wild-type Cre. © 2017 The Authors. Plant Biotechnology Journal published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd.

Multi-Hazard Assessment of Scour Damaged Bridges with UAS-Based Measurements

Science.gov (United States)

Özcan, O.; Ozcan, O.

2017-12-01

Flood and stream induced scour occurring in bridge piers constructed on rivers is one of the mostly observed failure reasons in bridges. Scour induced failure risk in bridges and determination of the alterations in bridge safety under seismic effects has the ultimate importance. Thus, for the determination of bridge safety under the scour effects, the scour amount under bridge piers should be designated realistically and should be tracked and updated continuously. Hereby, the scour induced failures in bridge foundation systems will be prevented and bridge substructure design will be conducted safely. In this study, in order to measure the amount of scour in bridge load bearing system (pile foundations and pile abutments) and to attain very high definition 3 dimensional models of river flood plain for the flood analysis, unmanned aircraft system (UAS) based measurement methods were implemented. UAS based measurement systems provide new and practical approach and bring high precision and reliable solutions considering recent measurement systems. For this purpose, the reinforced concrete (RC) bridge that is located on Antalya Boğaçayı River, Turkey and that failed in 2003 due to flood-induced scour was selected as the case study. The amount of scour occurred in bridge piers and piles was determined realistically and the behavior of bridge piers under scour effects was investigated. Future flood effects and the resultant amount of scour was determined with HEC-RAS software by using digital surface models that were obtained at regular intervals using UAS for the riverbed. In the light of the attained scour measurements and expected scour after a probable flood event, the behavior of scour damaged RC bridge was investigated by pushover and time history analyses under lateral and vertical seismic loadings. In the analyses, the load and displacement capacity of bridge was observed to diminish significantly under expected scour. Thus, the deterioration in multi hazard

Airline Operational Control (AOC)/UAS Ground Control Station (GCS) Collaboration, Phase I

Data.gov (United States)

National Aeronautics and Space Administration — We propose to form a network and a set of tools that will create a shared situation awareness with Unmanned Aircraft Systems (UAS) Ground Control Stations (GCSs) and...

Synthesis and properties of nitrogenous heterocycles containing a spiro-fused cyclopropane fragment

International Nuclear Information System (INIS)

Tomilov, Yury V; Nefedov, Oleg M; Kostyuchenko, Irina V

2000-01-01

The published data on the methods of synthesis and chemical transformations of nitrogenous heterocyclic compounds spiro-fused with a cyclopropane fragment are described systematically and generalised. The bibliography includes 146 references.

Detection of fission fragments by secondary emission; Detection des fragments de fission par emission secondaire

Energy Technology Data Exchange (ETDEWEB)

Audias, A [Commissariat a l' Energie Atomique, Saclay (France). Centre d' Etudes Nucleaires

1965-07-01

This fission fragment detecting apparatus is based on the principle that fragments traversing a thin foil will cause emission of secondary electrons. These electrons are then accelerated (10 kV) and directly detected by means of a plastic scintillator and associated photomultiplier. Some of the advantages of such a detector are, its rapidity, its discriminating power between alpha particles and fission fragments, its small energy loss in detecting the fragments and the relatively great amount of fissionable material which it can contain. This paper is subdivided as follows: a) theoretical considerations b) constructional details of apparatus and some experimental details and c) a study of the secondary emission effect itself. (author) [French] Le detecteur de fragments de fission que nous avons realise est base sur le principe de l'emission secondaire produite par les fragments de fission traversant une feuille mince: les electrons secondaires emis sont acceleres a des tensions telles (de l'ordre de 10 kV), qu'ils soient directement detectables par un scintillateur plastique associe a un photomultiplicateur. L'interet d'un tel detecteur reside: dans sa rapidite, sa tres bonne discrimination alpha, fission, la possibilite de detecter les fragments de fission avec une perte d'energie pouvant rester relativement faible, et la possibilite d'introduire des quantites de matiere fissile plus importantes que dans les autres types de detecteurs. Ce travail comporte: -) un apercu bibliographique de la theorie du phenomene, -) realisation et mise au point du detecteur avec etude experimentale de quelques parametres intervenant dans l'emission secondaire, -) etude de l'emission secondaire (sur la face d'emergence des fragments de fission) en fonction de l'energie du fragment et en fonction de l'epaisseur de matiere traversee avant emission secondaire, et -) une etude comparative de l'emission secondaire sur la face d'incidence et sur la face d'emergence des fragments de

Concept and design of a UAS-based platform for measurements of RF signal-in-space

Science.gov (United States)

Schrader, Thorsten; Bredemeyer, Jochen; Mihalachi, Marius; Rohde, Jan; Kleine-Ostmann, Thomas

2016-09-01

Field strength or signal-in-space (SIS) measurements have been performed by using manned helicopters, aircrafts or from ground level using extendable masts. With the availability of unmanned aerial systems (UAS) such as multicopters a new versatile platform for SIS measurements is deployable. Larger types show up to eight individually driven electric motors and controllers (therefore called octocopter). They provide the ability to fly along predefined traces, to hover at waypoints and to initiate other actions when those have been reached. They provide self-levelling and stabilisation and moreover, they may gear at a point of interest regardless of their actual position, e.g. during their flight around a tower. Their payload mainly depends on the platform size and allows integration of complex measurement equipment. Upgrading their navigation capabilities including state-of-the-art global navigation satellite system (GNSS) and ground station transmitter (real-time kinematic - RTK) enables precise localisation of the UAS. For operation in electromagnetic harsh environments a shielding can be considered and integrated into the concept. This paper describes concept and design of an octocopter and its instrumentation, along with applications in recent projects, in which we measure and validate terrestrial navigation systems applied in air traffic and the weather forecast services. Among those are instrumentation landing systems (ILS), VHF omnidirectional radio ranges (VOR), airport traffic and weather radars as well as military surveillance radars, and UHF wind profilers. Especially to investigate the possible interaction of VORs and radars with single wind turbines (WT) or wind power plants has become a major request of economy, military and politics. Here, UAS can be deployed to deliver measurement data investigating this interaction. Once developed and setup to a certain extent, UAS are easy and cost-efficient to operate. Nonetheless, due to their compact size, UAS

Airborne Collision Detection and Avoidance for Small UAS Sense and Avoid Systems

Science.gov (United States)

Sahawneh, Laith Rasmi

The increasing demand to integrate unmanned aircraft systems (UAS) into the national airspace is motivated by the rapid growth of the UAS industry, especially small UAS weighing less than 55 pounds. Their use however has been limited by the Federal Aviation Administration regulations due to collision risk they pose, safety and regulatory concerns. Therefore, before civil aviation authorities can approve routine UAS flight operations, UAS must be equipped with sense-and-avoid technology comparable to the see-and-avoid requirements for manned aircraft. The sense-and-avoid problem includes several important aspects including regulatory and system-level requirements, design specifications and performance standards, intruder detecting and tracking, collision risk assessment, and finally path planning and collision avoidance. In this dissertation, our primary focus is on developing an collision detection, risk assessment and avoidance framework that is computationally affordable and suitable to run on-board small UAS. To begin with, we address the minimum sensing range for the sense-and-avoid (SAA) system. We present an approximate close form analytical solution to compute the minimum sensing range to safely avoid an imminent collision. The approach is then demonstrated using a radar sensor prototype that achieves the required minimum sensing range. In the area of collision risk assessment and collision prediction, we present two approaches to estimate the collision risk of an encounter scenario. The first is a deterministic approach similar to those been developed for Traffic Alert and Collision Avoidance (TCAS) in manned aviation. We extend the approach to account for uncertainties of state estimates by deriving an analytic expression to propagate the error variance using Taylor series approximation. To address unanticipated intruders maneuvers, we propose an innovative probabilistic approach to quantify likely intruder trajectories and estimate the probability of

Unmanned Aircraft Systems (UAS) Integration in the National Airspace System (NAS) Project - Systems Integration and Operationalization (SIO) Demonstration

Science.gov (United States)

Swieringa, Kurt

2018-01-01

The UAS-NAS Project hosted a Systems Integration Operationalization (SIO) Industry Day for the SIO Request for Information (RFI) on November 30, 2017 in San Diego, California. This presentation is being presented to the same group as a follow up regarding the progress that the UAS-NAS project has made on the SIO RFI. The presentation will be virtual with a teleconference

Data of evolutionary structure change: 1A0UA-2ZLWD [Confc[Archive

Lifescience Database Archive (English)

Full Text Available 1A0UA-2ZLWD 1A0U 2ZLW A D -VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPT...R VQLSGEEKAAVLALWDKVN--EEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSEL.../index> 2ZLW D 2ZLWD

Unmanned Aerial Systems Traffic Management (UTM): Safely Enabling UAS Operations in Low-Altitude Airspace

Science.gov (United States)

Rios, Joseph

2016-01-01

Currently, there is no established infrastructure to enable and safely manage the widespread use of low-altitude airspace and UAS flight operations. Given this, and understanding that the FAA faces a mandate to modernize the present air traffic management system through computer automation and significantly reduce the number of air traffic controllers by FY 2020, the FAA maintains that a comprehensive, yet fully automated UAS traffic management (UTM) system for low-altitude airspace is needed. The concept of UTM is to begin by leveraging concepts from the system of roads, lanes, stop signs, rules and lights that govern vehicles on the ground today. Building on its legacy of work in air traffic management (ATM), NASA is working with industry to develop prototype technologies for a UAS Traffic Management (UTM) system that would evolve airspace integration procedures for enabling safe, efficient low-altitude flight operations that autonomously manage UAS operating in an approved low-altitude airspace environment. UTM is a cloud-based system that will autonomously manage all traffic at low altitudes to include UASs being operated beyond visual line of sight of an operator. UTM would thus enable safe and efficient flight operations by providing fully integrated traffic management services such as airspace design, corridors, dynamic geofencing, severe weather and wind avoidance, congestion management, terrain avoidance, route planning re-routing, separation management, sequencing spacing, and contingency management. UTM removes the need for human operators to continuously monitor aircraft operating in approved areas. NASA envisions concepts for two types of UTM systems. The first would be a small portable system, which could be moved between geographical areas in support of operations such as precision agriculture and public safety. The second would be a Persistent system, which would support low-altitude operations in an approved area by providing continuous automated

UAS Integration in the NAS Project Test Site Kick-off Meeting

Science.gov (United States)

Kopardekar, Parimal; Witzberger, Kevin; Hackenberg, Davis L.; Murphy, Jim

2015-01-01

This briefing was presented during the Test Site Kick Off Meeting to discuss the contract awards for Task 1 and Task 2. This briefing covered a high level overview for contract deliverables, Task 1 - UAS Traffic Management and Task 2, Live Virtual Constructive Distributed Environment.

Uranium in the rock fragments from Lunar soil

International Nuclear Information System (INIS)

Komarov, A.N.; Sergeev, S.A.

1983-01-01

Uranium content and distribution in Lunar rock fragments 0.4-0.9 mm in size from ''Lunar-16+ -20, -24'' stations were studied by the method of autoradiography. Uranium is almost absent in rock-forming minerals and is concentrated in some accessory mineral. Uranium content in microgabro fragments from ''Lunar-20 and -24'' equals (0.0n - n.0)16 -6 g/g. Variations are not related to fragment representation. Radiogra-- phies of fragments from Lunar soil showed the uranium distribution from uniform (in glasses) to extremely nonuniform in some holocrystalline rocks. It was pointed out, that uranium micro distributions in Lunar and Earth (effusive and magmatic) rocks have common features. In both cases rock-forming minerals don't contain appreciable uranium amount in the form of isomorphic admixture; uranium is highly concentrated in some accessory minerais. The difference lies in tne absence of hydroxyl -containing secondary minerals, which are enriched with uranium on Earth, in Lunar rocks. ''Film'' uranium micromineralization, which occurs in rocks of the Earth along the boundaries of mineral grains is absent in Lunar rocks as well

UA2 central calorimeter

CERN Multimedia

The UA2 central calorimeter measured the energy of individual particles created in proton-antiproton collisions. Accurate calibration allowed the W and Z masses to be measured with a precision of about 1%. The calorimeter had 24 slices like this one, each weighing 4 tons. The slices were arranged like orange segments around the collision point. Incoming particles produced showers of secondary particles in the layers of heavy material. These showers passed through the layers of plastic scintillator, generating light which was taken by light guides (green) to the data collection electronics. The amount of light was proportional to the energy of the original particle. The inner 23 cm of lead and plastic sandwiches measured electrons and photons; the outer 80 cm of iron and plastic sandwiches measured strongly interacting hadrons. The detector was calibrated by injecting light through optical fibres or by placing a radioactive source in the tube on the bottom edge.

An Energy-Aware Trajectory Optimization Layer for sUAS

Science.gov (United States)

Silva, William A.

The focus of this work is the implementation of an energy-aware trajectory optimization algorithm that enables small unmanned aircraft systems (sUAS) to operate in unknown, dynamic severe weather environments. The software is designed as a component of an Energy-Aware Dynamic Data Driven Application System (EA-DDDAS) for sUAS. This work addresses the challenges of integrating and executing an online trajectory optimization algorithm during mission operations in the field. Using simplified aircraft kinematics, the energy-aware algorithm enables extraction of kinetic energy from measured winds to optimize thrust use and endurance during flight. The optimization layer, based upon a nonlinear program formulation, extracts energy by exploiting strong wind velocity gradients in the wind field, a process known as dynamic soaring. The trajectory optimization layer extends the energy-aware path planner developed by Wenceslao Shaw-Cortez te{Shaw-cortez2013} to include additional mission configurations, simulations with a 6-DOF model, and validation of the system with flight testing in June 2015 in Lubbock, Texas. The trajectory optimization layer interfaces with several components within the EA-DDDAS to provide an sUAS with optimal flight trajectories in real-time during severe weather. As a result, execution timing, data transfer, and scalability are considered in the design of the software. Severe weather also poses a measure of unpredictability to the system with respect to communication between systems and available data resources during mission operations. A heuristic mission tree with different cost functions and constraints is implemented to provide a level of adaptability to the optimization layer. Simulations and flight experiments are performed to assess the efficacy of the trajectory optimization layer. The results are used to assess the feasibility of flying dynamic soaring trajectories with existing controllers as well as to verify the interconnections between

UA9 report for 2012

CERN Document Server

Scandale, W

2012-01-01

This paper describes the recent UA9 progress adding new evidence to the feasibility of crystal-assisted collimation in hadron colliders. A new goniometer with shorter crystals was used to more efficiently deflect the SPS beam halo with a larger reduction of the off-momentum halo generated in the collimation system. Such a reduction was particularly remarkable for heavy-ions. A considerable reduction of losses was detected by the loss-maps along the whole accelerator circumference. A fraction of the running time was devoted to optimize the configuration of the collimator setup in view of maximizing the collimation efficiency and to investigate effects that could play an important role in LHC. In the North Area the activity devoted to the characterization of the crystals for the SPS and LHC was continued.

Heavy-Quark Production in the Target Fragmentation Region

CERN Document Server

Graudenz, Dirk

1997-01-01

Fixed-target experiments permit the study of hadron production in the target fragmentation region. It is expected that the tagging of specific particles in the target fragments can be employed to introduce a bias in the hard scattering process towards a specific flavour content. The case of hadrons containing a heavy quark is particularly attractive because of the clear experimental signatures and the applicability of perturbative QCD. The standard approach to one-particle inclusive processes based on fragmentation functions is valid in the current fragmentation region and for large transverse momenta $p_T$ in the target fragmentation region, but it fails for particle production at small $p_T$ in the target fragmentation region. A collinear singularity, which cannot be absorbed in the standard way into the phenomenological distribution functions, prohibits the application of this procedure. This situation is remedied by the introduction of a new set of distribution functions, the target fragmentation function...

A 19-kDa C-terminal tryptic fragment of the α chain of Na/K-ATPase is essential for occlusion and transport of cations

International Nuclear Information System (INIS)

Karlish, S.J.D.; Goldshleger, R.; Stein, W.D.

1990-01-01

Tryptic digestion of pig renal Na/K-ATPase in the presence of Rb and absence of Ca ions removes about half of the protein but leaves a stable 19-kDa membrane-embedded fragment derived from the α chain, a largely intact β chain, and essentially normal Rb- and Na-occlusion capacity. Subsequent digestion with trypsin in the presence of Ca or absence of Rb ions leads to rapid loss of the 19-kDa fragment and a parallel loss of Rb occlusion, demonstrating that the fragment is essential for occlusion. The N-terminal sequence of the 19-kDa fragment is Asn-Pro-Lys-Thr-Asp-Lys-Leu-Val-Asn-Glu-Arg-Leu-Ile-Ser-Met-Ala, beginning at residue 830 and extending toward the C terminus. Membranes containing the 19-kDa fragment have the following functional properties. (i) ATP-dependent functions are absent. (ii) The apparent affinity for occluding Rb is unchanged, the affinity for Na is lower than in the control enzyme, and activation is now strongly sigmoidal rather than hyperbolic. (iii) Membranes containing the 19-kDa fragment can be reconstituted into phospholipid vesicles and sustain slow Rb-Rb exchange. Thus the transport pathway is retained. The authors conclude that cation occlusion sites and the transport pathway within transmembrane segments are quite separate from the ATP binding sites, located on the cytoplasmic domain of the α chain. Interactions between cation and ATP sites, the heart of active transport, must be indirect - mediated, presumably, by conformational changes of the protein

A 19-kDa C-terminal tryptic fragment of the. alpha. chain of Na/K-ATPase is essential for occlusion and transport of cations

Energy Technology Data Exchange (ETDEWEB)

Karlish, S.J.D.; Goldshleger, R. (Weizmann Institute of Science, Rehovot (Israel)); Stein, W.D. (Hebrew Univ. Jerusalem (Israel))

1990-06-01

Tryptic digestion of pig renal Na/K-ATPase in the presence of Rb and absence of Ca ions removes about half of the protein but leaves a stable 19-kDa membrane-embedded fragment derived from the {alpha} chain, a largely intact {beta} chain, and essentially normal Rb- and Na-occlusion capacity. Subsequent digestion with trypsin in the presence of Ca or absence of Rb ions leads to rapid loss of the 19-kDa fragment and a parallel loss of Rb occlusion, demonstrating that the fragment is essential for occlusion. The N-terminal sequence of the 19-kDa fragment is Asn-Pro-Lys-Thr-Asp-Lys-Leu-Val-Asn-Glu-Arg-Leu-Ile-Ser-Met-Ala, beginning at residue 830 and extending toward the C terminus. Membranes containing the 19-kDa fragment have the following functional properties. (i) ATP-dependent functions are absent. (ii) The apparent affinity for occluding Rb is unchanged, the affinity for Na is lower than in the control enzyme, and activation is now strongly sigmoidal rather than hyperbolic. (iii) Membranes containing the 19-kDa fragment can be reconstituted into phospholipid vesicles and sustain slow Rb-Rb exchange. Thus the transport pathway is retained. The authors conclude that cation occlusion sites and the transport pathway within transmembrane segments are quite separate from the ATP binding sites, located on the cytoplasmic domain of the {alpha} chain. Interactions between cation and ATP sites, the heart of active transport, must be indirect - mediated, presumably, by conformational changes of the protein.

Vertical Integration in factories using OPC-UA and IEC-61499

Directory of Open Access Journals (Sweden)

Marcelo V. García

2017-02-01

Full Text Available Nowadays, factory automation systems need to cope with very different challenges, such as big data, IIoT, etc. These challenges lead to a new generation of automation systems based on the so-called Cyber-Physical Production Systems (CPPS globally connected to form a flexible System of Cyber-Physical Production Systems (SoCPPS. CPPSs require acquisition of production system data and smart data processing to extract information to improve the overall system performance. To achieve that it is needed to bridge the gap between the control systems and higher layers. This paper discusses an approach to use the IEC 61499 function block concept to exchange data between plant floor and higher layers using an industrial standard like OPC UA. The OPC UA server offers subscription mechanisms, making possible the integration of several resources residing at plant floor. As it runs on embedded devices, the proposal makes possible to acquire plant information at low cost, enabling at the same time, a component-based design for enterprise plant floor control with independence of the hardware platform used

The Consequences of the FAA not Offering Emergency Agricultural UAS Rules for Water Conservation During the 2012 Drought

Science.gov (United States)

Darling, R. G.

2016-12-01

The FAA's policies for agricultural Unmanned Aerial Systems (UAS) is essential towards preservation and optimization of water use in the parched Western United States. Had FAA applied emergency rules putting farmers on equal-footing with hobbyists for sUAS use at the beginning of the 2012 drought, the Western US could have been able to save approximately 3 Million/AF of water through improved irrigation management. For perspective, Los Angeles city's annual current consumption is 587,000 acre-feet. This study uses various assumptions about developed water use in agriculture and urban areas to determine water use, energy consumption, monetary loss through delay in FAA regulations. If the saved water was added to the ground the energy savings could have been approximately 1.27 Terra-Watt hours, enough energy to power the entire University of California system for 5 years. It remains unclear if new FAA regulations are sufficiently permissive to allow for widespread adoption of sUAS based precision agriculture. Substantial opportunities exist for utilizing UAS traffic management software in rural areas of less crowed airspace: incorporating geofencing and a notification system to operators and air traffic control as an alternative to a difficult examination process.

Mapping informal small-scale mining features in a data-sparse tropical environment with a small UAS

Science.gov (United States)

Chirico, Peter G.; Dewitt, Jessica D.

2017-01-01

This study evaluates the use of a small unmanned aerial system (UAS) to collect imagery over artisanal mining sites in West Africa. The purpose of this study is to consider how very high-resolution imagery and digital surface models (DSMs) derived from structure-from-motion (SfM) photogrammetric techniques from a small UAS can fill the gap in geospatial data collection between satellite imagery and data gathered during field work to map and monitor informal mining sites in tropical environments. The study compares both wide-angle and narrow field of view camera systems in the collection and analysis of high-resolution orthoimages and DSMs of artisanal mining pits. The results of the study indicate that UAS imagery and SfM photogrammetric techniques permit DSMs to be produced with a high degree of precision and relative accuracy, but highlight the challenges of mapping small artisanal mining pits in remote and data sparse terrain.

UAS Integration in the NAS Project: Flight Test 3 Data Analysis of JADEM-Autoresolver Detect and Avoid System

Science.gov (United States)

Gong, Chester; Wu, Minghong G.; Santiago, Confesor

2016-01-01

The Unmanned Aircraft Systems Integration in the National Airspace System project, or UAS Integration in the NAS, aims to reduce technical barriers related to safety and operational challenges associated with enabling routine UAS access to the NAS. The UAS Integration in the NAS Project conducted a flight test activity, referred to as Flight Test 3 (FT3), involving several Detect-and-Avoid (DAA) research prototype systems between June 15, 2015 and August 12, 2015 at the Armstrong Flight Research Center (AFRC). This report documents the flight testing and analysis results for the NASA Ames-developed JADEM-Autoresolver DAA system, referred to as 'Autoresolver' herein. Four flight test days (June 17, 18, 22, and July 22) were dedicated to Autoresolver testing. The objectives of this test were as follows: 1. Validate CPA prediction accuracy and detect-and-avoid (DAA, formerly known as self-separation) alerting logic in realistic flight conditions. 2. Validate DAA trajectory model including maneuvers. 3. Evaluate TCAS/DAA interoperability. 4. Inform final Minimum Operating Performance Standards (MOPS). Flight test scenarios were designed to collect data to directly address the objectives 1-3. Objective 4, inform final MOPS, was a general objective applicable to the UAS in the NAS project as a whole, of which flight test is a subset. This report presents analysis results completed in support of the UAS in the NAS project FT3 data review conducted on October 20, 2015. Due to time constraints and, to a lesser extent, TCAS data collection issues, objective 3 was not evaluated in this analysis.

Behavioral effects of the [beta]-endorphin fragment 2-9

NARCIS (Netherlands)

Ree, J.M. van; Wied, D. de

1982-01-01

The non-opiate β-endorphin (βE) fragment des-Tyr-α-endorphin (βE 2–16) delays extinction of pole jumping avoidance behavior and potentiates apomorphine-induced stereotyped sniffing. Structure-activity relationship studies revealed that the active moiety mediating these psycho-stimulant effects

Production and muonic decay of the Z0 intermediate vector boson in the UA1 experiment

International Nuclear Information System (INIS)

Leuchs, R.

1988-01-01

In the years 1982 to 1985 the intermediate bosons W +- and Z 0 were detected in all the leptonic decay channels. In the present work we examined experimentally the production of the Z 0 in proton-antiproton collisions, followed by decay of the Z 0 into two muons. At present this is possible only in the UA1 experiment. Within the framework of this work I was initially responsible for the correct data readout from the muon detector. For this purpose it was necessary to build a monitoring system based on microprocessors, which could be used to monitor and test our apparatus. This monitoring system contains numerous programs for the diagnosis of the equipment. In the analysis I first selected the Z 0 events in the runs of 1984 and 1985, and then determined the efficiency of this selection. I also participated in setting up the p/sub t//sup μ/ > 15 GeV/c selection. Then the Z 0 sample was tested for completeness, and the background calculated anew. The methods of energy balance and mass fitting were refined and systematized. Thus the production properties and the mass of the Z 0 could be determined for the first time for the entire measurement period of the UA1. The determination of the parameters of the standard model was done by also including the results of analyses from other decay channels of the W and Z bosons. 149 refs., 60 figs., 14 tabs

Unmanned Aircraft Systems (UAS) Integration in the National Airspace System (NAS) Project: KDP-A for Phase 2 Minimum Operational Performance Standards

Science.gov (United States)

Grindle, Laurie; Hackenberg, Davis L.

2016-01-01

UAS Integration in the NAS Project has: a) Developed Technical Challenges that are crucial to UAS integration, aligned with NASA's Strategic Plan and Thrusts, and support FAA standards development. b) Demonstrated rigorous project management processes through the execution of previous phases. c) Defined Partnership Plans. d) Established path to KDP-C. Request approval of Technical Challenges, execution of partnerships and plans, and execution of near-term FY17 activities. There is an increasing need to fly UAS in the NAS to perform missions of vital importance to National Security and Defense, Emergency Management, and Science. There is also an emerging need to enable commercial applications such as cargo transport (e.g. FedEx). Unencumbered NAS Access for Civil/Commercial UAS. Provide research findings, utilizing simulation and flight tests, to support the development and validation of DAA and C2 technologies necessary for integrating Unmanned Aircraft Systems into the National Airspace System.

Comparison of Performance between Genetic Algorithm and SCE-UA for Calibration of SCS-CN Surface Runoff Simulation

Directory of Open Access Journals (Sweden)

Ji-Hong Jeon

2014-11-01

Full Text Available Global optimization methods linked with simulation models are widely used for automated calibration and serve as useful tools for searching for cost-effective alternatives for environmental management. A genetic algorithm (GA and shuffled complex evolution (SCE-UA algorithm were linked with the Long-Term Hydrologic Impact Assessment (L-THIA model, which employs the curve number (SCS-CN method. The performance of the two optimization methods was compared by automatically calibrating L-THIA for monthly runoff from 10 watersheds in Indiana. The selected watershed areas ranged from 32.7 to 5844.1 km2. The SCS-CN values and total five-day rainfall for adjustment were optimized, and the objective function used was the Nash-Sutcliffe value (NS value. The GA method rapidly reached the optimal space until the 10th generating population (generation, and after the 10th generation solutions increased dispersion around the optimal space, called a cross hair pattern, because of mutation rate increase. The number of looping executions influenced the performance of model calibration for the SCE-UA and GA method. The GA method performed better for the case of fewer loop executions than the SCE-UA method. For most watersheds, calibration performance using GA was better than for SCE-UA until the 50th generation when the number of model loop executions was around 5150 (one generation has 100 individuals. However, after the 50th generation of the GA method, the SCE-UA method performed better for calibrating monthly runoff compared to the GA method. Optimized SCS-CN values for primary land use types were nearly the same for the two methods, but those for minor land use types and total five-day rainfall for AMC adjustment were somewhat different because those parameters did not significantly influence calculation of the objective function. The GA method is recommended for cases when model simulation takes a long time and the model user does not have sufficient time

Fragmentation of the C60 molecule in collision with light ions studied by a multi-correlation technique. Cross-sections, electron spectroscopy

International Nuclear Information System (INIS)

Rentenier, A.

2004-04-01

A quantitative study of the C60 fullerenes fragmentation in collision with light ions (H n + with n=1,2,3, He q+ with q=1,2) in the velocity range 0,1 - 2,3 u.a.) is presented. The multi-correlation technique, developed between fragment ions and electrons with well defined energy, has enlightened some of the dependences and properties of fragmentation mechanisms (cross sections, electron spectroscopy, size distributions, kinetic energy of fragment ions, Campi's scatter plot, activation energies). The deposited energy hence appeared as an important parameter. Cross sections have been measured, for the first time, for all the collisional processes. Ionisation and capture only depends on the collision velocity. On the other hand, scaling laws with the deposited energy have been observed for the cross sections of multifragmentation, which depends on the collision energy and the nature of the projectile. The deposited energy has also been found as an essential parameter to understand the evolution of the charged fragment size distributions. The electron spectroscopy, achieved at an emission angle of 35 degrees, showed spectra peaked at important energies (from 5 to 20 eV). The spectra shape depends on the collision velocity. A first theoretical analysis points out the link between the observed energy distribution and the presence of a centrifugal potential barrier. Finally, correlation experiments between produced ions and electron energy reveal that electron energy increases with internal energy. (author)

The development and validation of an unmanned aerial system (UAS) for the measurement of methane flux

Science.gov (United States)

Allen, G.; Shah, A.; Williams, P. I.; Ricketts, H.; Hollingsworth, P.; Kabbabe, K.; Bourn, M.; Pitt, J. R.; Helmore, J.; Lowry, D.; Robinson, R. A.; Finlayson, A.

2017-12-01

Emission controls for CH4are a part of the Paris Agreement and other national emissions strategies. This work represents a new method for precise quantification of point-source and facility-level methane emissions flux rates to inform both the climate science community and policymakers. In this paper, we describe the development of an integrated Unmanned Aerial System (UAS) for the measurement of high-precision in-situ CH4 concentrations. We also describe the development of a mass balance flux calculation model tailored to UAS plume sampling downwind; and the validation of this method using a known emission flux from a controlled release facility. A validation field trial was conducted at the UK Met Office site in Cardington, UK, between 31 Oct and 4 Nov 2016 using the UK National Physical Laboratory's Controlled Release Facility (CRF). A modified DJI-S900 hexrotor UAS was tethered via an inlet to a ground-based Los Gatos Ultraportable Greenhouse Gas Analyser to record geospatially-referenced methane (and carbon dioxide) concentrations. Methane fluxes from the CRF were emitted at 5 kg/hr and 10 kg/hr in a series of blind trials (fluxes were not reported to the team prior to the calculation of UAS-derived flux) for a total of 7 UAS flights, which sampled 200 m downwind of source(s), each lasting around 20 minutes. The flux calculation method was adapted for sampling considerations downwind of an emission source that has not had sufficient time to develop a Gaussian morphology. The UAS-measured methane fluxes, and representative flux uncertainty (derived from an error propagation model), were found to compare well with the controlled CH4 emission rate. For the 7 experiments, the standard error between the measured and emitted CH4 flux was found to be +/-6% with a mean bias of +0.4 kg/hr. Limits of flux sensitivity (to within 25% uncertainty) were found to extend to as little as 0.12 kg/h. Further improvements to the accuracy of flux calculation could be made by

Monitoring cotton (Gossypium hirsutum L.) germination using ultrahigh-resolution UAS images

Science.gov (United States)

Examination of seed germination rate is of great importance for growers early in the season to determine the necessity for replanting their fields. The objective of this study was to explore the potential of using unmanned aircraft system (UAS)-based visible-band images to monitor and quantify the c...

The framework of a UAS-aided flash flood modeling system for coastal regions

Science.gov (United States)

Zhang, H.; Xu, H.

2016-02-01

Flash floods cause severe economic damage and are one of the leading causes of fatalities connected with natural disasters in the Gulf Coast region. Current flash flood modeling systems rely on empirical hydrological models driven by precipitation estimates only. Although precipitation is the driving factor for flash floods, soil moisture, urban drainage system and impervious surface have been recognized to have significant impacts on the development of flash floods. We propose a new flash flooding modeling system that integrates 3-D hydrological simulation with satellite and multi-UAS observations. It will have three advantages over existing modeling systems. First, it will incorporate 1-km soil moisture data through integrating satellite images from European SMOS mission and NASA's SMAP mission. The utilization of high-resolution satellite images will provide essential information to determine antecedent soil moisture condition, which is an essential control on flood generation. Second, this system is able to adjust flood forecasting based on real-time inundation information collected by multi-UAS. A group of UAS will be deployed during storm events to capture the changing extent of flooded areas and water depth at multiple critical locations simultaneously. Such information will be transmitted to a hydrological model to validate and improve flood simulation. Third, the backbone of this system is a state-of-the-art 3-D hydrological model that assimilates the hydrological information from satellites and multi-UAS. The model is able to address surface water-groundwater interactions and reflect the effects of various infrastructures. Using Web-GIS technologies, the modeling results will be available online as interactive flood maps accessible to the public. To support the development and verification of this modeling system, surface and subsurface hydrological observations will be conducted in a number of small watersheds in the Coastal Bend region. We envision this

Using the "Economics U$A" Telecourse within the Traditional Microeconomics Course.

Science.gov (United States)

Alavi, Jafar; And Others

1993-01-01

A control group of 31 received traditional microeconomics instruction; 20 experimentals viewed the Economics U$A telecourse with lecture, discussion, and textbook. Pre/posttest data demonstrated no significant differences in comprehension of content or in cognitive level, although the video group did do better in the area of implicit application.…

Genetic architecture of autosome-mediated hybrid male sterility in Drosophila.

Science.gov (United States)

Marín, I

1996-04-01

Several estimators have been developed for assessing the number of sterility factors in a chromosome based on the sizes of fertile and sterile introgressed fragments. Assuming that two factors are required for producing sterility, simulations show that one of these, twice the inverse of the relative size of the largest fertile fragment, provides good average approximations when as few as five fertile fragments are analyzed. The estimators have been used for deducing the number of factors from previous data on several pairs of species. A particular result contrasts with the authors' interpretations: instead of the high number of sterility factors suggested, only a few per autosome are estimated in both reciprocal crosses involving Drosophila buzzatii and D. koepferae. It has been possible to map these factors, between three and six per chromosome, in the autosomes 3 and 4 of these species. Out of 203 introgressions of different fragments or combinations of fragments, the outcome of at least 192 is explained by the mapped zones. These results suggest that autosome-mediated sterility in the male hybrids of these species is mediated by a few epistatic factors, similarly to X-mediated sterility in the hybrids of other Drosophila species.

Cationization increases brain distribution of an amyloid-beta protofibril selective F(ab')2 fragment

OpenAIRE

Syvänen, Stina; Edén, Desireé; Sehlin, Dag

2017-01-01

Antibodies and fragments thereof are, because of high selectivity for their targets, considered as potential therapeutics and biomarkers for several neurological disorders. However, due to their large molecular size, antibodies/fragments do not easily penetrate into the brain. The aim of the present study was to improve the brain distribution via adsorptive-mediated transcytosis of an amyloid-beta (A beta) protofibril selective F(ab')2 fragment (F(ab')2-h158). F(ab')2-h158 was cationized to d...

Experimental modelling of fragmentation applied to volcanic explosions

Science.gov (United States)

Haug, Øystein Thordén; Galland, Olivier; Gisler, Galen R.

2013-12-01

Explosions during volcanic eruptions cause fragmentation of magma and host rock, resulting in fragments with sizes ranging from boulders to fine ash. The products can be described by fragment size distributions (FSD), which commonly follow power laws with exponent D. The processes that lead to power-law distributions and the physical parameters that control D remain unknown. We developed a quantitative experimental procedure to study the physics of the fragmentation process through time. The apparatus consists of a Hele-Shaw cell containing a layer of cohesive silica flour that is fragmented by a rapid injection of pressurized air. The evolving fragmentation of the flour is monitored with a high-speed camera, and the images are analysed to obtain the evolution of the number of fragments (N), their average size (A), and the FSD. Using the results from our image-analysis procedure, we find transient empirical laws for N, A and the exponent D of the power-law FSD as functions of the initial air pressure. We show that our experimental procedure is a promising tool for unravelling the complex physics of fragmentation during phreatomagmatic and phreatic eruptions.

Stathmin 1/2-triggered microtubule loss mediates Golgi fragmentation in mutant SOD1 motor neurons

NARCIS (Netherlands)

Bellouze, Sarah; Baillat, Gilbert; Buttigieg, Dorothée; de la Grange, Pierre; Rabouille, Catherine; Haase, Georg

2016-01-01

BACKGROUND: Pathological Golgi fragmentation represents a constant pre-clinical feature of many neurodegenerative diseases including amyotrophic lateral sclerosis (ALS) but its molecular mechanisms remain hitherto unclear. RESULTS: Here, we show that the severe Golgi fragmentation in transgenic

A Novel Molecular Diagnostic of Glioblastomas: Detection of an Extracellular Fragment of Protein Tyrosine Phosphatase μ

Directory of Open Access Journals (Sweden)

Susan M. Burden-Gulley

2010-04-01

Full Text Available We recently found that normal human brain and low-grade astrocytomas express the receptor protein tyrosine phosphatase mu (PTPμ and that the more invasive astrocytomas, glioblastoma multiforme (GBM, downregulate full-length PTPμ expression. Loss of PTPμ expression in GBMs is due to proteolytic cleavage that generates an intracellular and potentially a cleaved and released extracellular fragment of PTPμ. Here, we identify that a cleaved extracellular fragment containing the domains required for PTPμ-mediated adhesion remains associated with GBM tumor tissue. We hypothesized that detection of this fragment would make an excellent diagnostic tool for the localization of tumor tissue within the brain. To this end, we generated a series of fluorescently tagged peptide probes that bind the PTPμ fragment. The peptide probes specifically recognize GBM cells in tissue sections of surgically resected human tumors. To test whether the peptide probes are able to detect GBM tumors in vivo, the PTPμ peptide probes were tested in both mouse flank and intracranial xenograft human glioblastoma tumor model systems. The glial tumors were molecularly labeled with the PTPμ peptide probes within minutes of tail vein injection using the Maestro FLEX In Vivo Imaging System. The label was stable for at least 3 hours. Together, these results indicate that peptide recognition of the PTPμ extracellular fragment provides a novel molecular diagnostic tool for detection of human glioblastomas. Such a tool has clear translational applications and may lead to improved surgical resections and prognosis for patients with this devastating disease.

Design and Analysis of Cost-Efficient Sensor Deployment for Tracking Small UAS with Agent-Based Modeling.

Science.gov (United States)

Shin, Sangmi; Park, Seongha; Kim, Yongho; Matson, Eric T

2016-04-22

Recently, commercial unmanned aerial systems (UAS) have gained popularity. However, these UAS are potential threats to people in terms of safety in public places, such as public parks or stadiums. To reduce such threats, we consider a design, modeling, and evaluation of a cost-efficient sensor system that detects and tracks small UAS. In this research, we focus on discovering the best sensor deployments by simulating different types and numbers of sensors in a designated area, which provide reasonable detection rates at low costs. Also, the system should cover the crowded areas more thoroughly than vacant areas to reduce direct threats to people underneath. This research study utilized the Agent-Based Modeling (ABM) technique to model a system consisting of independent and heterogeneous agents that interact with each other. Our previous work presented the ability to apply ABM to analyze the sensor configurations with two types of radars in terms of cost-efficiency. The results from the ABM simulation provide a list of candidate configurations and deployments that can be referred to for applications in the real world environment.

Design and Analysis of Cost-Efficient Sensor Deployment for Tracking Small UAS with Agent-Based Modeling

Directory of Open Access Journals (Sweden)

Sangmi Shin

2016-04-01

Full Text Available Recently, commercial unmanned aerial systems (UAS have gained popularity. However, these UAS are potential threats to people in terms of safety in public places, such as public parks or stadiums. To reduce such threats, we consider a design, modeling, and evaluation of a cost-efficient sensor system that detects and tracks small UAS. In this research, we focus on discovering the best sensor deployments by simulating different types and numbers of sensors in a designated area, which provide reasonable detection rates at low costs. Also, the system should cover the crowded areas more thoroughly than vacant areas to reduce direct threats to people underneath. This research study utilized the Agent-Based Modeling (ABM technique to model a system consisting of independent and heterogeneous agents that interact with each other. Our previous work presented the ability to apply ABM to analyze the sensor configurations with two types of radars in terms of cost-efficiency. The results from the ABM simulation provide a list of candidate configurations and deployments that can be referred to for applications in the real world environment.

Use of passive UAS imaging to measure biophysical parameters in a southern Rocky Mountain subalpine forest

Science.gov (United States)

Caldwell, M. K.; Sloan, J.; Mladinich, C. S.; Wessman, C. A.

2013-12-01

Unmanned Aerial Systems (UAS) can provide detailed, fine spatial resolution imagery for ecological uses not otherwise obtainable through standard methods. The use of UAS imagery for ecology is a rapidly -evolving field, where the study of forest landscape ecology can be augmented using UAS imagery to scale and validate biophysical data from field measurements to spaceborne observations. High resolution imagery provided by UAS (30 cm2 pixels) offers detailed canopy cover and forest structure data in a time efficient and inexpensive manner. Using a GoPro Hero2 (2 mm focal length) camera mounted in the nose cone of a Raven unmanned system, we collected aerial and thermal data monthly during the summer 2013, over two subalpine forests in the Southern Rocky Mountains in Colorado. These forests are dominated by lodgepole pine (Pinus ponderosae) and have experienced insect-driven (primarily mountain pine beetle; MPB, Dendroctonus ponderosae) mortality. Objectives of this study include observations of forest health variables such as canopy water content (CWC) from thermal imagery and leaf area index (LAI), biomass and forest productivity from the Normalized Difference Vegetation Index (NDVI) from UAS imagery. Observations were, validated with ground measurements. Images were processed using a combination of AgiSoft Photoscan professional software and ENVI remote imaging software. We utilized the software Leaf Area Index Calculator (LAIC) developed by Córcoles et al. (2013) for calculating LAI from digital images and modified to conform to leaf area of needle-leaf trees as in Chen and Cihlar (1996) . LAIC uses a K-means cluster analysis to decipher the RGB levels for each pixel and distinguish between green aboveground vegetation and other materials, and project leaf area per unit of ground surface area (i.e. half total needle surface area per unit area). Preliminary LAIC UAS data shows summer average LAI was 3.8 in the most dense forest stands and 2.95 in less dense

Diffusion mediated coagulation and fragmentation based study of domain formation in lipid bilayer membrane

Energy Technology Data Exchange (ETDEWEB)

Rao, Laxminarsimha V., E-mail: laxman@iitk.ac.in [Mechanics and Applied Mathematics Group, Department of Mechanical Engineering, Indian Institute of Technology Kanpur, Kanpur 208016 (India); Roy, Subhradeep [Department of Biomedical Engineering and Mechanics (MC 0219), Virginia Tech, 495 Old Turner Street, Blacksburg, VA 24061 (United States); Das, Sovan Lal [Mechanics and Applied Mathematics Group, Department of Mechanical Engineering, Indian Institute of Technology Kanpur, Kanpur 208016 (India)

2017-01-15

We estimate the equilibrium size distribution of cholesterol rich micro-domains on a lipid bilayer by solving Smoluchowski equation for coagulation and fragmentation. Towards this aim, we first derive the coagulation kernels based on the diffusion behaviour of domains moving in a two dimensional membrane sheet, as this represents the reality better. We incorporate three different diffusion scenarios of domain diffusion into our coagulation kernel. Subsequently, we investigate the influence of the parameters in our model on the coagulation and fragmentation behaviour. The observed behaviours of the coagulation and fragmentation kernels are also manifested in the equilibrium domain size distribution and its first moment. Finally, considering the liquid domains diffusing in a supported lipid bilayer, we fit the equilibrium domain size distribution to a benchmark solution.

UAS Power amplifier for Extended range of Non-payload communication Devices (UPEND), Phase I

Data.gov (United States)

National Aeronautics and Space Administration — The integration of Unmanned Aircraft Systems (UAS) into the National Airspace System (NAS) requires a robust, reliable communication link between the Unmanned Aerial...

RECORDING AND MODELING OF FORTRESSES AND CASTLES WITH UAS. SOME STUDY CASES IN JAEN (SOUTHERN SPAIN

Directory of Open Access Journals (Sweden)

J. Cardenal

2016-06-01

Full Text Available The province of Jaen (Southern Spain has one of the largest concentrations of medieval fortresses of all Europe. Moreover ancient Iberian settlements located in oppida (fortified villages and dated at VI-IV BC also are outstanding examples of historical heritage landmarks in the region. Most of these places are being restored or under documentation analysis to prevent their progressive deterioration. These places have several geometric characteristics in common, such as isolated locations, elongated shapes, largemedium size objects (in the order of tens to few hundred of meters, architectural features with vertical development (such as masonry or rammed earth walls, towers, gates, battlements, etc or without it (walls, buildings or paths layouts at ground level. The object size, the required level of details and accuracy (of the order of some few cm and both vertical and horizontal features imply that present UAS techniques can be advantageously used with respect to conventional aerial and terrestrial photogrammetric techniques. Vertical stereoscopic and oblique convergent UAS photogrammetric networks combined with processing techniques based on Structure from Motion (SfM algorithms allow detailed low cost 2D/3D products. The proper selection of the UAS, camera, image acquisition mode (stop and/or cruising, the network and the processing software will determine the quality of final products and their usefulness in metric documentation, 3D modelization or museology. The efficiency of the use of UAS has been analyzed in several selected examples in Jaen (Burgalimar and Berrueco castles, Xth and XIIIth centuries, respectively, and the Iberian Puente Tablas oppidum, Vth-IVth centuries BC.

Forward calorimetry in the upgraded UA1 experiment

International Nuclear Information System (INIS)

Alvarez-Taviel, F.J.; Diez-Hedo, F.; Doncel, P.; Marquina, M.A.; Rodrigo, T.; Bacci, C.; Petrolo, E.; Tusi, A.; Ferrando, A.; Givernaud, A.; Rubbia, C.; Vuillemin, V.

1989-01-01

The major improvement in the upgraded UA1 calorimetry at the Santi ppS is the general use of ionization chambers filled with tetramethylpentane (TMP) as a detection medium interspersed with uranium plates as absorber. To achieve overall uniformity of detection down to very small angles, an identical solution is proposed for the forward calorimetry. Forward calorimetry is essential for good total and missing energy measurement at high luminosity in view of the increasing rate of multiple collisions. Both designs for forward and very forward calorimeters are presented along with expected resolutions. (orig.)

SCEDS: protein fragments for molecular replacement in Phaser

Energy Technology Data Exchange (ETDEWEB)

McCoy, Airlie J., E-mail: ajm201@cam.ac.uk [University of Cambridge, Hills Road, Cambridge CB2 0XY (United Kingdom); Nicholls, Robert A. [MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge CB2 0QH (United Kingdom); Schneider, Thomas R. [Hamburg Unit c/o DESY, Notkestrasse 85, 22603 Hamburg (Germany); University of Cambridge, Hills Road, Cambridge CB2 0XY (United Kingdom)

2013-11-01

Protein fragments suitable for use in molecular replacement can be generated by normal-mode perturbation, analysis of the difference distance matrix of the original versus normal-mode perturbed structures, and SCEDS, a score that measures the sphericity, continuity, equality and density of the resulting fragments. A method is described for generating protein fragments suitable for use as molecular-replacement (MR) template models. The template model for a protein suspected to undergo a conformational change is perturbed along combinations of low-frequency normal modes of the elastic network model. The unperturbed structure is then compared with each perturbed structure in turn and the structurally invariant regions are identified by analysing the difference distance matrix. These fragments are scored with SCEDS, which is a combined measure of the sphericity of the fragments, the continuity of the fragments with respect to the polypeptide chain, the equality in number of atoms in the fragments and the density of C{sup α} atoms in the triaxial ellipsoid of the fragment extents. The fragment divisions with the highest SCEDS are then used as separate template models for MR. Test cases show that where the protein contains fragments that undergo a change in juxtaposition between template model and target, SCEDS can identify fragments that lead to a lower R factor after ten cycles of all-atom refinement with REFMAC5 than the original template structure. The method has been implemented in the software Phaser.

SCEDS: protein fragments for molecular replacement in Phaser

International Nuclear Information System (INIS)

McCoy, Airlie J.; Nicholls, Robert A.; Schneider, Thomas R.

2013-01-01

Protein fragments suitable for use in molecular replacement can be generated by normal-mode perturbation, analysis of the difference distance matrix of the original versus normal-mode perturbed structures, and SCEDS, a score that measures the sphericity, continuity, equality and density of the resulting fragments. A method is described for generating protein fragments suitable for use as molecular-replacement (MR) template models. The template model for a protein suspected to undergo a conformational change is perturbed along combinations of low-frequency normal modes of the elastic network model. The unperturbed structure is then compared with each perturbed structure in turn and the structurally invariant regions are identified by analysing the difference distance matrix. These fragments are scored with SCEDS, which is a combined measure of the sphericity of the fragments, the continuity of the fragments with respect to the polypeptide chain, the equality in number of atoms in the fragments and the density of C α atoms in the triaxial ellipsoid of the fragment extents. The fragment divisions with the highest SCEDS are then used as separate template models for MR. Test cases show that where the protein contains fragments that undergo a change in juxtaposition between template model and target, SCEDS can identify fragments that lead to a lower R factor after ten cycles of all-atom refinement with REFMAC5 than the original template structure. The method has been implemented in the software Phaser

The activity of the anti-apoptotic fragment generated by the caspase-3/p120 RasGAP stress-sensing module displays strict Akt isoform specificity.

Science.gov (United States)

Vanli, Güliz; Peltzer, Nieves; Dubuis, Gilles; Widmann, Christian

2014-12-01

The caspase-3/p120 RasGAP module acts as a stress sensor that promotes pro-survival or pro-death signaling depending on the intensity and the duration of the stressful stimuli. Partial cleavage of p120 RasGAP generates a fragment, called fragment N, which protects stressed cells by activating Akt signaling. Akt family members regulate many cellular processes including proliferation, inhibition of apoptosis and metabolism. These cellular processes are regulated by three distinct Akt isoforms: Akt1, Akt2 and Akt3. However, which of these isoforms are required for fragment N mediated protection have not been defined. In this study, we investigated the individual contribution of each isoform in fragment N-mediated cell protection against Fas ligand induced cell death. To this end, DLD1 and HCT116 isogenic cell lines lacking specific Akt isoforms were used. It was found that fragment N could activate Akt1 and Akt2 but that only the former could mediate the protective activity of the RasGAP-derived fragment. Even overexpression of Akt2 or Akt3 could not rescue the inability of fragment N to protect cells lacking Akt1. These results demonstrate a strict Akt isoform requirement for the anti-apoptotic activity of fragment N. Copyright © 2014 Elsevier Inc. All rights reserved.

Evaluation of UAS for Atmospheric Boundary Layer Monitoring as Part of the 2017 CLOUD-MAP Flight Campaign

Science.gov (United States)

Jacob, J.; Chilson, P. B.; Houston, A. L.; Smith, S.

2017-12-01

CLOUD-MAP (Collaboration Leading Operational UAS Development for Meteorology and Atmospheric Physics) is a 4 year, 4 university collaboration sponsored by the National Science Foundation to develop capabilities that will allow meteorologists and atmospheric scientists to use unmanned aircraft as a common, useful everyday measurement tool. Currently, we know that systems can be used for meteorological measurements, but they are far from being practical or robust for everyday field diagnostics by the average meteorologist or scientist. In particular, UAS are well suited for the lower atmosphere, namely the lower boundary layer that has a large impact on the atmosphere and where much of the weather phenomena begin. The 2016 and 2017 campaigns resulted in over 500 unmanned aircraft flights of over a dozen separate platforms collecting meteorological data at 3 different sites including Oklahoma Mesonet stations and the DOE Atmospheric Radiation Measurement Southern Great Plains (SGP) site. The SGP atmospheric observatory was the first field measurement site established by the ARM Climate Research Facility and is the world's largest and most extensive climate research facility. Data from the SGP was used to validate observations from the various UAS. UAS operations consisted of both fixed and rotary platforms up to 3,000 AGL with thermodynamic, wind, and chemistry (viz., CO2 and CH4) sensors. ABL conditions were observed over a variety of conditions, particularly during the morning transition to evaluate the boundary layer dilution due to vertical mixing and changes in the wind patterns from diurnal variability.

Crystal Collimation efficiency measured with the Medipix detector in SPS UA9 experiment.

CERN Document Server

Laface, E; Tlustos, L; Ippolito, V

2010-01-01

The UA9 experiment was performed in 6 MDs from May to November 2009 with the goal of studying the collimation properties of a crystal in the framework of a future exploitation in the LHC collimation system. An important parameter evaluated for the characterization of the crystal collimation is the efficiency of halo extraction when the crystal is in channeling mode. In this paper it is explained how this efficiency can be measured using a pixel detector, the Medipix, installed in the Roman Pot of UA9. The number of extracted particles counted by the Medipix is compared with the total number of circulating particles measured by the Beam Current Transformers (BCTs): from this comparison the efficiency of the system composed by the crystal, used in channeling mode, and a tungsten absorber is proved to be greater than 85%.

Laser-assisted shape selective fragmentation of nanoparticles

Energy Technology Data Exchange (ETDEWEB)

Kazakevich, P.V. [Wave Research Center, General Physics Institute of the Russian Academy of Sciences, 38, Vavilov street, 117942 Moscow (Russian Federation); Simakin, A.V. [Wave Research Center, General Physics Institute of the Russian Academy of Sciences, 38, Vavilov street, 117942 Moscow (Russian Federation); Shafeev, G.A. [Wave Research Center, General Physics Institute of the Russian Academy of Sciences, 38, Vavilov street, 117942 Moscow (Russian Federation)]. E-mail: shafeev@kapella.gpi.ru; Viau, G. [ITODYS, UMR 7086, Universite Paris 7-Denis Diderot, case 7090, 2 place Jussieu, 75251 Paris Cedex 05 (France); Soumare, Y. [ITODYS, UMR 7086, Universite Paris 7-Denis Diderot, case 7090, 2 place Jussieu, 75251 Paris Cedex 05 (France); Bozon-Verduraz, F. [ITODYS, UMR 7086, Universite Paris 7-Denis Diderot, case 7090, 2 place Jussieu, 75251 Paris Cedex 05 (France)

2007-07-31

Experimental results are presented on laser-assisted fragmentation of gold-containing nanoparticles suspended in liquids (either ethanol or water). Two kinds of nanoparticles are considered: (i) elongated Au nanorods synthesized by laser ablation of a gold target immersed in liquid phase; (ii) gold-covered NiCo nanorods with high aspect ratio ({theta} {approx} 10) synthesized by wet chemistry processes. The shape selectivity induced by laser fragmentation of these nanorods is gained via tuning the wavelength of laser radiation into different parts of the spectrum of their plasmon resonance corresponding to different aspect ratios {theta}. Fragmentation is performed using three laser wavelengths, involving a Cu vapour laser (510 and 578 nm) and a Nd:YAG (1064 nm). Nanoparticles are characterized by UV-vis spectrometry, Transmission Electron Microscopy (TEM). The effect of laser pulse duration (nanosecond against picosecond range) is also studied in the case of fragmentation with an IR laser radiation.

How Should the Fires Network for the Future Force BDE Level UA be Structured?

National Research Council Canada - National Science Library

Ulloa, Juan

2004-01-01

... to all available fires in the area of operations. This monograph constitutes an exploratory study of and preliminary analysis of the effects of networking all available fires at the brigade level UA...

Mechanics of fragmentation of crocodile skin and other thin films

Science.gov (United States)

Qin, Zhao; Pugno, Nicola M.; Buehler, Markus J.

2014-01-01

Fragmentation of thin layers of materials is mediated by a network of cracks on its surface. It is commonly seen in dehydrated paintings or asphalt pavements and even in graphene or other two-dimensional materials, but is also observed in the characteristic polygonal pattern on a crocodile's head. Here, we build a simple mechanical model of a thin film and investigate the generation and development of fragmentation patterns as the material is exposed to various modes of deformation. We find that the characteristic size of fragmentation, defined by the mean diameter of polygons, is strictly governed by mechanical properties of the film material. Our result demonstrates that skin fragmentation on the head of crocodiles is dominated by that it features a small ratio between the fracture energy and Young's modulus, and the patterns agree well with experimental observations. Understanding this mechanics-driven process could be applied to improve the lifetime and reliability of thin film coatings by mimicking crocodile skin. PMID:24862190

Mechanics of fragmentation of crocodile skin and other thin films

Science.gov (United States)

Qin, Zhao; Pugno, Nicola M.; Buehler, Markus J.

2014-05-01

Fragmentation of thin layers of materials is mediated by a network of cracks on its surface. It is commonly seen in dehydrated paintings or asphalt pavements and even in graphene or other two-dimensional materials, but is also observed in the characteristic polygonal pattern on a crocodile's head. Here, we build a simple mechanical model of a thin film and investigate the generation and development of fragmentation patterns as the material is exposed to various modes of deformation. We find that the characteristic size of fragmentation, defined by the mean diameter of polygons, is strictly governed by mechanical properties of the film material. Our result demonstrates that skin fragmentation on the head of crocodiles is dominated by that it features a small ratio between the fracture energy and Young's modulus, and the patterns agree well with experimental observations. Understanding this mechanics-driven process could be applied to improve the lifetime and reliability of thin film coatings by mimicking crocodile skin.

High-throughput fragment screening by affinity LC-MS.

Science.gov (United States)

Duong-Thi, Minh-Dao; Bergström, Maria; Fex, Tomas; Isaksson, Roland; Ohlson, Sten

2013-02-01

Fragment screening, an emerging approach for hit finding in drug discovery, has recently been proven effective by its first approved drug, vemurafenib, for cancer treatment. Techniques such as nuclear magnetic resonance, surface plasmon resonance, and isothemal titration calorimetry, with their own pros and cons, have been employed for screening fragment libraries. As an alternative approach, screening based on high-performance liquid chromatography separation has been developed. In this work, we present weak affinity LC/MS as a method to screen fragments under high-throughput conditions. Affinity-based capillary columns with immobilized thrombin were used to screen a collection of 590 compounds from a fragment library. The collection was divided into 11 mixtures (each containing 35 to 65 fragments) and screened by MS detection. The primary screening was performed in 3500 fragments per day). Thirty hits were defined, which subsequently entered a secondary screening using an active site-blocked thrombin column for confirmation of specificity. One hit showed selective binding to thrombin with an estimated dissociation constant (K (D)) in the 0.1 mM range. This study shows that affinity LC/MS is characterized by high throughput, ease of operation, and low consumption of target and fragments, and therefore it promises to be a valuable method for fragment screening.

Fragment-based lead generation: identification of seed fragments by a highly efficient fragment screening technology

Science.gov (United States)

Neumann, Lars; Ritscher, Allegra; Müller, Gerhard; Hafenbradl, Doris

2009-08-01

For the detection of the precise and unambiguous binding of fragments to a specific binding site on the target protein, we have developed a novel reporter displacement binding assay technology. The application of this technology for the fragment screening as well as the fragment evolution process with a specific modelling based design strategy is demonstrated for inhibitors of the protein kinase p38alpha. In a fragment screening approach seed fragments were identified which were then used to build compounds from the deep-pocket towards the hinge binding area of the protein kinase p38alpha based on a modelling approach. BIRB796 was used as a blueprint for the alignment of the fragments. The fragment evolution of these deep-pocket binding fragments towards the fully optimized inhibitor BIRB796 included the modulation of the residence time as well as the affinity. The goal of our study was to evaluate the robustness and efficiency of our novel fragment screening technology at high fragment concentrations, compare the screening data with biochemical activity data and to demonstrate the evolution of the hit fragments with fast kinetics, into slow kinetic inhibitors in an in silico approach.

Molecular markers. Amplified fragment length polymorphism

Directory of Open Access Journals (Sweden)

Pržulj Novo

2005-01-01

Full Text Available Amplified Fragment Length Polymorphism molecular markers (AFLPs has been developed combining procedures of RFLPs and RAPDs molekular markers, i.e. the first step is restriction digestion of the genomic DNA that is followed by selective amplification of the restricted fragments. The advantage of the AFLP technique is that it allows rapid generation of a large number of reproducible markers. The reproducibility of AFLPs markers is assured by the use of restriction site-specific adapters and adapter-specific primers for PCR reaction. Only fragments containing the restriction site sequence plus the additional nucleotides will be amplified and the more selected nucleotides added on the primer sequence the fewer the number of fragments amplified by PCR. The amplified products are normally separated on a sequencing gel and visualized after exposure to X-ray film or by using fluorescent labeled primers. AFLP shave proven to be extremely proficient in revealing diversity at below the species level. A disadvantage of AFLP technique is that AFLPs are essentially a dominant marker system and not able to identify heterozygotes.

The potential of UAS imagery for soil mapping at the agricultural plot scale

Science.gov (United States)

Gilliot, Jean-Marc; Michelin, Joël; Becu, Maxime; Cissé, Moustapha; Hadjar, Dalila; Vaudour, Emmanuelle

2017-04-01

Soil mapping is expensive and time consuming. Airborne and satellite remote sensing data have already been used to predict some soil properties but now Unmanned Aerial Systems (UAS) allow to do many images acquisitions in various field conditions in favour of developing methods for better prediction models construction. This study propose an operational method for spatial prediction of soil properties (organic carbon, clay) at the scale of the agricultural plot by using UAS imagery. An agricultural plot of 28 ha, located in the western region of Paris France, was studied from March to May 2016. An area of 3.6 ha was delimited within the plot and a total of 16 flights were completed. The UAS platforms used were the eBee fixed wing provided by Sensefly® flying at an altitude from 60m to 130m and the iris+ 3DR® Quadcopter (from 30m to 100m). Two multispectral visible near-infrared cameras were used: the AirInov® MultiSPEC 4C® and the Micasense® RedEdge®. 42 ground control points (GCP) were sampled within the 3.6 ha plot. A centimetric Trimble Geo 7x DGPS was used to determine precise GCP positions. On each GCP the soil horizons were described and the top soil were sampled for standard physico-chemical analysis. Ground spectral measurements with a Spectral Evolution® SR-3500 spectroradiometer were made synchronously with the drone flights. 22 additional GCP were placed around the 3.6 ha area in order to realize a precise georeferencing. The multispectral mosaics were calculated using the Agisoft Photoscan® software and all mapping processings were done with the ESRI ArcGIS® 10.3 software. The soil properties were estimated by partial least squares regression (PLSR) between the laboratory analyses and the multispectral information of the UAS images, with the PLS package of the R software. The objective was to establish a model that would achieve an acceptable prediction quality using minimum number of points. For this, we tested 5 models with a decreasing

Relative and Absolute Calibration of a Multihead Camera System with Oblique and Nadir Looking Cameras for a Uas

Science.gov (United States)

Niemeyer, F.; Schima, R.; Grenzdörffer, G.

2013-08-01

Numerous unmanned aerial systems (UAS) are currently flooding the market. For the most diverse applications UAVs are special designed and used. Micro and mini UAS (maximum take-off weight up to 5 kg) are of particular interest, because legal restrictions are still manageable but also the payload capacities are sufficient for many imaging sensors. Currently a camera system with four oblique and one nadir looking cameras is under development at the Chair for Geodesy and Geoinformatics. The so-called "Four Vision" camera system was successfully built and tested in the air. A MD4-1000 UAS from microdrones is used as a carrier system. Light weight industrial cameras are used and controlled by a central computer. For further photogrammetric image processing, each individual camera, as well as all the cameras together have to be calibrated. This paper focuses on the determination of the relative orientation between the cameras with the „Australis" software and will give an overview of the results and experiences of test flights.

LRP-mediated clearance of Abeta is inhibited by KPI-containing isoforms of APP.

Science.gov (United States)

Moir, Robert D; Tanzi, Rudolph E

2005-04-01

The pathogenesis of Alzheimer's disease (AD) involves the abnormal accumulation and deposition of beta-amyloid in cerebral blood vessels and in the brain parenchyma. Critical in modulating beta-amyloid deposition in brain is the flux of Abeta across the blood brain barrier. The low-density lipoprotein receptor-related protein (LRP), is a large endocytic receptor that mediates the efflux of Abeta out of brain and into the periphery. The first step in the LRP-mediated clearance of Abeta involves the formation of a complex between Abeta and the LRP ligands apolipoprotein E (apoE) or alpha(2)-macroglobulin (alpha(2)M). The Abeta/chaperone complexes then bind to LRP via binding sites on apoE or alpha(2)M. The efflux of Abeta/chaperone complexes out of the neuropil and into the periphery may be attenuated by LRP-ligands that compete with apoE or alpha(2)M for LRP binding. LRP is also the cell surface receptor for Kunitz Protease Inhibitor (KPI) containing isoforms of Abeta's parent protein, the amyloid protein precursor (APP). Protein and mRNA levels of KPI-containing APP isoforms (APP-KPI) are elevated in AD brain and are associated with increased Abeta production. In this study we show that soluble non-amyloidogenic APP-KPI can also inhibit the uptake of Abeta/alpha(2)M in a cell culture model of LRP mediated Abeta clearance. Clearance of Abeta/apoE complexes was not inhibited by APP-KPI. Our findings are consistent with studies showing that apoE and alpha(2)M have discrete binding sites on LRP. Most significantly, our data suggests that the elevated levels of APP-KPI in AD brain may attenuate the clearance of Abeta, the proteins own amyloidogenic catabolic product.

Nuclear targeting by fragmentation of the Potato spindle tuber viroid genome

International Nuclear Information System (INIS)

Abraitiene, Asta; Zhao Yan; Hammond, Rosemarie

2008-01-01

Transient expression of engineered reporter RNAs encoding an intron-containing green fluorescent protein (GFP) from a Potato virus X-based expression vector previously demonstrated the nuclear targeting capability of the 359 nucleotide Potato spindle tuber viroid (PSTVd) RNA genome. To further delimit the putative nuclear-targeting signal, PSTVd subgenomic fragments were embedded within the intron, and recombinant reporter RNAs were inoculated onto Nicotiana benthamiana plants. Appearance of green fluorescence in leaf tissue inoculated with PSTVd-fragment-containing constructs indicated shuttling of the RNA into the nucleus by fragments as short as 80 nucleotides in length. Plant-to-plant variation in the timing of intron removal and subsequent GFP fluorescence was observed; however, earliest and most abundant GFP expression was obtained with constructs containing the conserved hairpin I palindrome structure and embedded upper central conserved region. Our results suggest that this conserved sequence and/or the stem-loop structure it forms is sufficient for import of PSTVd into the nucleus

CD40-mediated apoptosis in murine B-lymphoma lines containing mutated p53

DEFF Research Database (Denmark)

Hollmann, Annette C; Gong, Qiaoke; Owens, Trevor

2002-01-01

Crosslinking CD40 induces normal B-cells to proliferate and differentiate but causes many tumor cell lines to undergo apoptosis. As p53 is required for many apoptotic pathways, we analyzed the effects of CD40 ligation and their correlation with p53 function in four murine B-lymphoma lines. A20...... of detectable p21 mRNA in A20 and M12 cells. P21 mRNA was increased to detectable levels in M12 cells upon CD40 ligation; however, blocking this effect with the p53 inhibitor pifithrin had no effect on CD40-mediated apoptosis. Sequencing showed that p53 in A20 and M12 cells contained point mutations leading...... to amino acid substitutions in DNA binding regions, but was unmutated in WEHI231 and WEHI 279. These results suggest that CD40-mediated apoptosis can occur in the absence of functional p53....

Embedded Fragments from U.S. Military Personnel—Chemical Analysis and Potential Health Implications

Directory of Open Access Journals (Sweden)

José A. Centeno

2014-01-01

Full Text Available Background: The majority of modern war wounds are characterized by high-energy blast injuries containing a wide range of retained foreign materials of a metallic or composite nature. Health effects of retained fragments range from local or systemic toxicities to foreign body reactions or malignancies, and dependent on the chemical composition and corrosiveness of the fragments in vivo. Information obtained by chemical analysis of excised fragments can be used to guide clinical decisions regarding the need for fragment removal, to develop therapeutic interventions, and to better anticipate future medical problems from retained fragment related injuries. In response to this need, a new U.S Department of Defense (DoD directive has been issued requiring characterization of all removed fragments to provide a database of fragment types occurring in combat injuries. Objectives: The objective of this study is to determine the chemical composition of retained embedded fragments removed from injured military personnel, and to relate results to histological findings in tissue adjacent to fragment material. Methods: We describe an approach for the chemical analysis and characterization of retained fragments and adjacent tissues, and include case examples describing fragments containing depleted uranium (DU, tungsten (W, lead (Pb, and non-metal foreign bodies composed of natural and composite materials. Fragments obtained from four patients with penetrating blast wounds to the limbs were studied employing a wide range of chemical and microscopy techniques. Available adjacent tissues from three of the cases were histologically, microscopically, and chemically examined. The physical and compositional properties of the removed foreign material surfaces were examined with energy dispersive x-ray fluorescence spectrometry (EDXRF, scanning electron microscopy (SEM, laser ablation inductively-coupled plasma mass-spectrometry (LA-ICP-MS, and confocal laser Raman

Structural organization of the human glucocorticoid receptor determined by one- and two-dimensional gel electrophoresis of proteolytic receptor fragments

International Nuclear Information System (INIS)

Smith, A.C.; Harmon, J.M.

1987-01-01

The structural organization of the steroid-binding protein of the IM-9 cell glucocorticoid receptor was investigated by using one- and two-dimensional gel electrophoresis of proteolytic receptor fragments. One-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) of receptor fragments isolated after trypsin digestion of immunopurified [ 3 H]dexamethasone 21-mesylate ([ 3 H]DM-) labeled receptor revealed the presence of a stable 26.5-kilodalton (kDa) steroid-containing non-DNA-binding fragment, derived from a larger, less stable, 29-kDa fragment. The 26.5-kDa tryptic fragment appeared to be completely contained within a 41-kDa, steroid-containing, DNA-binding species isolated after chymotrypsin digestion of the intact protein. Two-dimensional electrophoretic analysis of the [ 3 H]DM-labeled tryptic fragments resolved two 26.5-kDa and two 29-kDa components. This was the same number of isoforms seen in the intact protein, indicating that the charge heterogeneity of the steroid-binding protein is the result of modification within the steroid-containing, non-DNA-binding, 26.5-kDa tryptic fragment. Two-dimensional analysis of the 41-kDa [ 3 H]DM-labeled chymotryptic species revealed a pattern of isoforms more complex than that seen either in the intact protein or in the steroid-containing tryptic fragments. These results suggest that the 41-kDa [ 3 H]DM-labeled species resolved by one-dimensional SDS-PAGE after chymotrypsin digestion may be composed of several distinct proteolytic fragments

The bit slice micro-processor 'GESPRO' as a project in the UA2 experiment

International Nuclear Information System (INIS)

Becam, C.; Bernaudin, P.; Delanghe, J.; Mencik, M.; Merkel, B.; Plothow, H.; Fest, H.M.; Lecoq, J.; Martin, H.; Meyer, J.M.

1981-01-01

The bit slice micro-processor GESPRO, as it is proposed for use in the UA 2 data acquisition chain and trigger system, is a CAMAC module plugged into a standard Elliott System crate via which it communicates as a slave with its host computer (ND, DEC). It has full control of CAMAC as a master unit. GESPRO is a 24 bit machine (150 ns effective cycle time) with multi-mode memory addressing capacity of 64 K words. The micro-processor structure uses 5 busses including pipe-line registers to mask access time and 16 interrupt levels. The micro-program memory capacity is 2 K (RAM) words of 48 bits each. A special hardwired module allows floating point (as well as integer) multiplication of 24 x 24 bits, result in 48 bits, in about 200 ns. This micro-processor could be used in the UA2 data acquisition chain and trigger system for the following tasks: a) online data reduction, i.e. to read DURANDAL (fast ADC's = the hardware trigger in the experiment), process the information (effective mass calculation, etc.) resulting in accepting or rejecting the event. b) read out and analysis of the accepted data (collect statistical information). c) preprocess the data (calculation of pointers, address decoding, etc.). The UA2 version of GESPRO is under construction, programs and micro-programs are under development. Hardware and software will be tested with simulated data. First results are expected in about one year from now. (orig.)

Fragment-based modelling of single stranded RNA bound to RNA recognition motif containing proteins

Science.gov (United States)

de Beauchene, Isaure Chauvot; de Vries, Sjoerd J.; Zacharias, Martin

2016-01-01

Abstract Protein-RNA complexes are important for many biological processes. However, structural modeling of such complexes is hampered by the high flexibility of RNA. Particularly challenging is the docking of single-stranded RNA (ssRNA). We have developed a fragment-based approach to model the structure of ssRNA bound to a protein, based on only the protein structure, the RNA sequence and conserved contacts. The conformational diversity of each RNA fragment is sampled by an exhaustive library of trinucleotides extracted from all known experimental protein–RNA complexes. The method was applied to ssRNA with up to 12 nucleotides which bind to dimers of the RNA recognition motifs (RRMs), a highly abundant eukaryotic RNA-binding domain. The fragment based docking allows a precise de novo atomic modeling of protein-bound ssRNA chains. On a benchmark of seven experimental ssRNA–RRM complexes, near-native models (with a mean heavy-atom deviation of <3 Å from experiment) were generated for six out of seven bound RNA chains, and even more precise models (deviation < 2 Å) were obtained for five out of seven cases, a significant improvement compared to the state of the art. The method is not restricted to RRMs but was also successfully applied to Pumilio RNA binding proteins. PMID:27131381

Simultaneous Observations of Beach and Surf-Zone Topography from a sUAS

Science.gov (United States)

Slocum, R. K.; Brodie, K. L.; Spore, N.

2016-02-01

Beaches and surf-zones can vary rapidly in time and space, necessitating frequent, spatially extensive observations for up-to-date knowledge on their current condition. Traditional surveying methods are expensive, can be dangerous in large wave conditions, and can lack sufficient spatial density. Existing remote sensing technologies have focused on both active sensing (airborne lidar, X-band radar) or passive sensing (electro-optical or infrared imagery) to either directly measure elevations of the beach and seafloor or exploit the optical signal of refracting and breaking waves in the surf-zone. These methods, however, can be prohibitively expensive for widespread, high temporal frequency use, or lack the spatial coverage required to quantify a large stretch of beach. UAS offer an affordable and accessible alternative, but existing COTS UAS sensor suites are not optimized for generation of bathymetry and topography at the same time. Here, we present a new approach using an inexpensive, custom multi-camera sensor designed with a wide field of view for integration on either a fixed wing of multirotor UAS platform. We introduce a processing methodology and workflow to generate a topographic pointcloud and rectified imagery of the water surface using structure from motion algorithms. The topographic pointcloud data is processed to generate a DSM of the beach and extract morphologic parameters (beach slope, dune toe, etc). Rectified imagery of the water surface is used to quantify sandbar location as well as perform a celerity based bathymetric inversion. Accuracy of this methodology is calculated by comparing processed data to lidar pointclouds, as well as photo identifiable targets on the beach and jetted into the surf zone. Funded by the USACE Military Engineering POD:A&U Program and Coastal Field Data Collection Program.

USE OF UAS FOR THE CONSERVATION OF HISTORICAL BUILDINGS IN CASE OF EMERGENCIES

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S. Gagliolo

2017-05-01

Full Text Available The task of conservation and management of cultural heritage is quite central in Italy, which lists a high number of beautiful architectures. A quick and precise survey may be requested in case of calamity. In the present paper, the most commonly used survey techniques are discussed, focusing on their applications for the conservation of the artistic heritage in case of emergency. Particular attention is given to Unmanned Aerial Systems (UAS photogrammetry and its potentiality in obtaining good results in terms of speed, cheapness, precision and accuracy, assuring at the same time the safety of the operators in critical situations (e.g. natural disasters. A case study, realized at the Castle of Casalbagliano (Alessandria, Italy, is discussed. Different image block configurations and acquisition geometries (nadiral and oblique images have been exploited, with the aim of defining useful guidelines for emergencies UAS survey of partially collapsed structures. An application to a significative case study is introduced.

Use of Uas for the Conservation of Historical Buildings in Case of Emergencies

Science.gov (United States)

Gagliolo, S.; Fagandini, R.; Federici, B.; Ferrando, I.; Passoni, D.; Pagliari, D.; Pinto, L.; Sguerso, D.

2017-05-01

The task of conservation and management of cultural heritage is quite central in Italy, which lists a high number of beautiful architectures. A quick and precise survey may be requested in case of calamity. In the present paper, the most commonly used survey techniques are discussed, focusing on their applications for the conservation of the artistic heritage in case of emergency. Particular attention is given to Unmanned Aerial Systems (UAS) photogrammetry and its potentiality in obtaining good results in terms of speed, cheapness, precision and accuracy, assuring at the same time the safety of the operators in critical situations (e.g. natural disasters). A case study, realized at the Castle of Casalbagliano (Alessandria, Italy), is discussed. Different image block configurations and acquisition geometries (nadiral and oblique images) have been exploited, with the aim of defining useful guidelines for emergencies UAS survey of partially collapsed structures. An application to a significative case study is introduced.

Fragmentation of the CRISPR-Cas Type I-B signature protein Cas8b.

Science.gov (United States)

Richter, Hagen; Rompf, Judith; Wiegel, Julia; Rau, Kristina; Randau, Lennart

2017-11-01

CRISPR arrays are transcribed into long precursor RNA species, which are further processed into mature CRISPR RNAs (crRNAs). Cas proteins utilize these crRNAs, which contain spacer sequences that can be derived from mobile genetic elements, to mediate immunity during a reoccurring virus infection. Type I CRISPR-Cas systems are defined by the presence of different Cascade interference complexes containing large and small subunits that play major roles during target DNA selection. Here, we produce the protein and crRNA components of the Type I-B CRISPR-Cas complex of Clostridium thermocellum and Methanococcus maripaludis. The C. thermocellum Cascade complexes were reconstituted and analyzed via size-exclusion chromatography. Activity of the heterologous M. maripaludis CRISPR-Cas system was followed using phage lambda plaques assays. The reconstituted Type-I-B Cascade complex contains Cas7, Cas5, Cas6b and the large subunit Cas8b. Cas6b can be omitted from the reconstitution protocol. The large subunit Cas8b was found to be represented by two tightly associated protein fragments and a small C-terminal Cas8b segment was identified in recombinant complexes and C. thermocellum cell lysate. Production of Cas8b generates a small C-terminal fragment, which is suggested to fulfill the role of the missing small subunit. A heterologous, synthetic M. maripaludis Type I-B system is active in E. coli against phage lambda, highlighting a potential for genome editing using endogenous Type-I-B CRISPR-Cas machineries. This article is part of a Special Issue entitled "Biochemistry of Synthetic Biology - Recent Developments" Guest Editor: Dr. Ilka Heinemann and Dr. Patrick O'Donoghue. Copyright © 2017 Elsevier B.V. All rights reserved.

Virtual fragment preparation for computational fragment-based drug design.

Science.gov (United States)

Ludington, Jennifer L

2015-01-01

Fragment-based drug design (FBDD) has become an important component of the drug discovery process. The use of fragments can accelerate both the search for a hit molecule and the development of that hit into a lead molecule for clinical testing. In addition to experimental methodologies for FBDD such as NMR and X-ray Crystallography screens, computational techniques are playing an increasingly important role. The success of the computational simulations is due in large part to how the database of virtual fragments is prepared. In order to prepare the fragments appropriately it is necessary to understand how FBDD differs from other approaches and the issues inherent in building up molecules from smaller fragment pieces. The ultimate goal of these calculations is to link two or more simulated fragments into a molecule that has an experimental binding affinity consistent with the additive predicted binding affinities of the virtual fragments. Computationally predicting binding affinities is a complex process, with many opportunities for introducing error. Therefore, care should be taken with the fragment preparation procedure to avoid introducing additional inaccuracies.This chapter is focused on the preparation process used to create a virtual fragment database. Several key issues of fragment preparation which affect the accuracy of binding affinity predictions are discussed. The first issue is the selection of the two-dimensional atomic structure of the virtual fragment. Although the particular usage of the fragment can affect this choice (i.e., whether the fragment will be used for calibration, binding site characterization, hit identification, or lead optimization), general factors such as synthetic accessibility, size, and flexibility are major considerations in selecting the 2D structure. Other aspects of preparing the virtual fragments for simulation are the generation of three-dimensional conformations and the assignment of the associated atomic point charges.

SU(5)c color model constraints from UA2

International Nuclear Information System (INIS)

Foot, R.; Hernandez, O.F.; Rizzo, T.G.; Ames Lab., IA; Iowa State Univ. of Science and Technology, Ames

1991-01-01

We investigate the possibility that the color gauge group SU(3) may arise as a consequence of the spontaneous symmetry breaking of SU(5) c . In an earlier paper we examine the constraints imposed on the SU(5) c color model by recent measurements of the dijet mass distribution at CDF. We found that the CDF data did not exclude any region of parameter space in the model. Here we consider similar data from UA2 and find that it leads to the constraint Msub(Z') > or approx. 280 GeV. (orig.)

Fungal mediator tail subunits contain classical transcriptional activation domains.

Science.gov (United States)

Liu, Zhongle; Myers, Lawrence C

2015-04-01

Classical activation domains within DNA-bound eukaryotic transcription factors make weak interactions with coactivator complexes, such as Mediator, to stimulate transcription. How these interactions stimulate transcription, however, is unknown. The activation of reporter genes by artificial fusion of Mediator subunits to DNA binding domains that bind to their promoters has been cited as evidence that the primary role of activators is simply to recruit Mediator. We have identified potent classical transcriptional activation domains in the C termini of several tail module subunits of Saccharomyces cerevisiae, Candida albicans, and Candida dubliniensis Mediator, while their N-terminal domains are necessary and sufficient for their incorporation into Mediator but do not possess the ability to activate transcription when fused to a DNA binding domain. This suggests that Mediator fusion proteins actually are functioning in a manner similar to that of a classical DNA-bound activator rather than just recruiting Mediator. Our finding that deletion of the activation domains of S. cerevisiae Med2 and Med3, as well as C. dubliniensis Tlo1 (a Med2 ortholog), impairs the induction of certain genes shows these domains function at native promoters. Activation domains within coactivators are likely an important feature of these complexes and one that may have been uniquely leveraged by a common fungal pathogen. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Fragman: an R package for fragment analysis.

Science.gov (United States)

Covarrubias-Pazaran, Giovanny; Diaz-Garcia, Luis; Schlautman, Brandon; Salazar, Walter; Zalapa, Juan

2016-04-21

Determination of microsatellite lengths or other DNA fragment types is an important initial component of many genetic studies such as mutation detection, linkage and quantitative trait loci (QTL) mapping, genetic diversity, pedigree analysis, and detection of heterozygosity. A handful of commercial and freely available software programs exist for fragment analysis; however, most of them are platform dependent and lack high-throughput applicability. We present the R package Fragman to serve as a freely available and platform independent resource for automatic scoring of DNA fragment lengths diversity panels and biparental populations. The program analyzes DNA fragment lengths generated in Applied Biosystems® (ABI) either manually or automatically by providing panels or bins. The package contains additional tools for converting the allele calls to GenAlEx, JoinMap® and OneMap software formats mainly used for genetic diversity and generating linkage maps in plant and animal populations. Easy plotting functions and multiplexing friendly capabilities are some of the strengths of this R package. Fragment analysis using a unique set of cranberry (Vaccinium macrocarpon) genotypes based on microsatellite markers is used to highlight the capabilities of Fragman. Fragman is a valuable new tool for genetic analysis. The package produces equivalent results to other popular software for fragment analysis while possessing unique advantages and the possibility of automation for high-throughput experiments by exploiting the power of R.

Analyzing the Potential for Unmanned Aerial Systems (UAS) Photogrammetry in Estimating Surface Deformations at a Geothermal Fiel

Science.gov (United States)

Pai, H.; Burnett, J.; Sladek, C.; Wing, M.; Feigl, K. L.; Selker, J. S.; Tyler, S.; Team, P.

2016-12-01

UAS systems equipped with a variety of spectral imaging devices are increasingly incorporated in spatial environmental assessments of continental surfaces (e.g., digital elevation maps, vegetative coverage classifications, surface temperatures). This presented work performed by the UAS team at the Center for Transformative Environmental Monitoring Programs (AirCTEMPS) examines the potential to measure small (sub-cm) deformation from a geothermal injection experiment at Brady's geothermal field in western Nevada (USA). Areal mapping of the 700 x 270 m area of interest was conducted with a nadir pointing Sony A5100 digital camera onboard an autopiloted quadcopter. A total of 16 ground control points were installed using a TopCon GR3 GPS receiver. Two such mapping campaigns were conducted with one before and one after an anticipated surface deformation event. A digital elevation map (DEM) for each time period was created from over 1500 images having 80% overlap/sidelap by using structure from motion (SfM) via Agisoft Photoscan software. The resulting DEM resolution was 8 mm/pixel with residual aerial triangulation errors was < 5 mm. We present preliminary results from an optimized workflow which achieved errors and average differential DEM heights between campaigns at the cm-scale which is broader than the maximum expected deformation. Despite the disconnect between error and deformation severity, this study presents a unique application of sub-cm UAS-based DEMs and further distinguishes itself by comparing results to concurrent Interferometric Synthetic Radar (InSAR). The intent of our study and presentation of results is to streamline, cross-validate, and share methods to encourage further adoption of UAS imagery into the standard toolkit for environmental surface sensing across spatial scales.

RELATIVE AND ABSOLUTE CALIBRATION OF A MULTIHEAD CAMERA SYSTEM WITH OBLIQUE AND NADIR LOOKING CAMERAS FOR A UAS

Directory of Open Access Journals (Sweden)

F. Niemeyer

2013-08-01

Full Text Available Numerous unmanned aerial systems (UAS are currently flooding the market. For the most diverse applications UAVs are special designed and used. Micro and mini UAS (maximum take-off weight up to 5 kg are of particular interest, because legal restrictions are still manageable but also the payload capacities are sufficient for many imaging sensors. Currently a camera system with four oblique and one nadir looking cameras is under development at the Chair for Geodesy and Geoinformatics. The so-called "Four Vision" camera system was successfully built and tested in the air. A MD4-1000 UAS from microdrones is used as a carrier system. Light weight industrial cameras are used and controlled by a central computer. For further photogrammetric image processing, each individual camera, as well as all the cameras together have to be calibrated. This paper focuses on the determination of the relative orientation between the cameras with the „Australis“ software and will give an overview of the results and experiences of test flights.

Caspase-3-mediated cleavage of p65/RelA results in a carboxy-terminal fragment that inhibits IκBα and enhances HIV-1 replication in human T lymphocytes

Directory of Open Access Journals (Sweden)

Alcamí José

2008-12-01

Full Text Available Abstract Background Degradation of p65/RelA has been involved in both the inhibition of NF-κB-dependent activity and the onset of apoptosis. However, the mechanisms of NF-κB degradation are unclear and can vary depending on the cell type. Cleavage of p65/RelA can produce an amino-terminal fragment that was shown to act as a dominant-negative inhibitor of NF-κB, thereby promoting apoptosis. However, the opposite situation has also been described and the production of a carboxy-terminal fragment that contains two potent transactivation domains has also been related to the onset of apoptosis. In this context, a carboxy-terminal fragment of p65/RelA (ΔNH2p65, detected in non-apoptotic human T lymphocytes upon activation, has been studied. T cells constitute one of the long-lived cellular reservoirs of the human immunodeficiency virus type 1 (HIV-1. Because NF-κB is the most important inducible element involved in initiation of HIV-1 transcription, an adequate control of NF-κB response is of paramount importance for both T cell survival and viral spread. Its major inhibitor IκBα constitutes a master terminator of NF-κB response that is complemented by degradation of p65/RelA. Results and conclusions In this study, the function of a caspase-3-mediated carboxy-terminal fragment of p65/RelA, which was detected in activated human peripheral blood lymphocytes (PBLs, was analyzed. Cells producing this truncated p65/RelA did not undergo apoptosis but showed a high viability, in spite of caspase-3 activation. ΔNH2p65 lacked most of DNA-binding domain but retained the dimerization domain, NLS and transactivation domains. Consequently, it could translocate to the nucleus, associate with NF-κB1/p50 and IκBα, but could not bind -κB consensus sites. However, although ΔNH2p65 lacked transcriptional activity by itself, it could increase NF-κB activity in a dose-dependent manner by hijacking IκBα. Thus, its expression resulted in a persistent

Fundamental study of hydrogen-attachment-induced peptide fragmentation occurring in the gas phase and during the matrix-assisted laser desorption/ionization process.

Science.gov (United States)

Asakawa, Daiki; Takahashi, Hidenori; Iwamoto, Shinichi; Tanaka, Koichi

2018-05-09

Mass spectrometry with hydrogen-radical-mediated fragmentation techniques has been used for the sequencing of proteins/peptides. The two methods, matrix-assisted laser desorption/ionization in-source decay (MALDI-ISD) and hydrogen attachment/abstraction dissociation (HAD) are known as hydrogen-radical-mediated fragmentation techniques. MALDI-ISD occurs during laser induced desorption processes, whereas HAD utilizes the association of hydrogen with peptide ions in the gas phase. In this study, the general mechanisms of MALDI-ISD and HAD of peptides were investigated. We demonstrated the fragmentation of four model peptides and investigated the fragment formation pathways using density functional theory (DFT) calculations. The current experimental and computational joint study indicated that MALDI-ISD and HAD produce aminoketyl radical intermediates, which immediately undergo radical-induced cleavage at the N-Cα bond located on the C-terminal side of the radical site, leading to the c'/z˙ fragment pair. In the case of MALDI-ISD, the z˙ fragments undergo a subsequent reaction with the matrix to give z' and matrix adducts of the z fragments. In contrast, the c' and z˙ fragments react with hydrogen atoms during the HAD processes, and various fragment species, such as c˙, c', z˙ and z', were observed in the HAD-MS/MS mass spectra.

Heavy-quark fragmentation functions in the effective theory of heavy quarks

International Nuclear Information System (INIS)

Martynenko, A.P.; Saleev, V.A.

1996-01-01

The effective theory of heavy quarks is used to study b-bar-antiquark fragmentation in polarized Bc* mesons and b-quark fragmentation into P-wave (c-barb) states. The functions of heavy-quark fragmentation into longitudinally and transversely polarized S-wave (b-barc) states and into P-wave mesons containing b and c quarks are calculated. First-order corrections in 1/mb are taken into account exactly in these calculations. The results are shown to be consistent with the corresponding QCD calculations

Lead bullet fragments in venison from rifle-killed deer: potential for human dietary exposure.

Directory of Open Access Journals (Sweden)

W Grainger Hunt

Full Text Available Human consumers of wildlife killed with lead ammunition may be exposed to health risks associated with lead ingestion. This hypothesis is based on published studies showing elevated blood lead concentrations in subsistence hunter populations, retention of ammunition residues in the tissues of hunter-killed animals, and systemic, cognitive, and behavioral disorders associated with human lead body burdens once considered safe. Our objective was to determine the incidence and bioavailability of lead bullet fragments in hunter-killed venison, a widely-eaten food among hunters and their families. We radiographed 30 eviscerated carcasses of White-tailed Deer (Odocoileus virginianus shot by hunters with standard lead-core, copper-jacketed bullets under normal hunting conditions. All carcasses showed metal fragments (geometric mean = 136 fragments, range = 15-409 and widespread fragment dispersion. We took each carcass to a separate meat processor and fluoroscopically scanned the resulting meat packages; fluoroscopy revealed metal fragments in the ground meat packages of 24 (80% of the 30 deer; 32% of 234 ground meat packages contained at least one fragment. Fragments were identified as lead by ICP in 93% of 27 samples. Isotope ratios of lead in meat matched the ratios of bullets, and differed from background lead in bone. We fed fragment-containing venison to four pigs to test bioavailability; four controls received venison without fragments from the same deer. Mean blood lead concentrations in pigs peaked at 2.29 microg/dL (maximum 3.8 microg/dL 2 days following ingestion of fragment-containing venison, significantly higher than the 0.63 microg/dL averaged by controls. We conclude that people risk exposure to bioavailable lead from bullet fragments when they eat venison from deer killed with standard lead-based rifle bullets and processed under normal procedures. At risk in the U.S. are some ten million hunters, their families, and low

Assessing UAS Flight Testing and It's Importance for Beyond-Line-of-Sight UAS Control in Cooperation with Partnering Organizations

Science.gov (United States)

de Jong, Daphne

2015-01-01

From the 1st of June until the 21st of August, the internship has been conducted at NASA Ames Research Center as part of the Master of Space Studies at the International Space University. The main activities consisted of doing research on UAV flight-­-testing and the assessing of safety with respect to Beyond-­-Line-­-Of-­-Sight operations. Further activities consisted of accommodating international partners and potential partners at the NASA Ames site, in order to identify mutual interest and future collaboration. Besides those activities, the report describes the planning process of the ISU Space Coast Trip to 10 different space related companies on the west-­-coast of California. Key words: UAS, UAV, BLOS, Ames, ISU Trip

Non-apoptotic function of apoptotic proteins in the development of ...

Indian Academy of Sciences (India)

Figure 2. Expression of proapoptotic protein in saliary gland using c42. Apoptosis is induced in c42/UAS-Rpr (B), c42/UAS-hid14 (C) and c42/UAS-Grim wt9.8 (D) at the 1st instar, while in wild type, AO staining did not show DNA fragmentation indicating there is no apoptosis induction in SG at the 1st instar stage in the wild ...

Facile synthesis of polymeric fluorescent organic nanoparticles based on the self-polymerization of dopamine for biological imaging.

Science.gov (United States)

Shi, Yingge; Jiang, Ruming; Liu, Meiying; Fu, Lihua; Zeng, Guangjian; Wan, Qing; Mao, Liucheng; Deng, Fengjie; Zhang, Xiaoyong; Wei, Yen

2017-08-01

Polymeric fluorescent organic nanoparticles (polymer-FONs) have raised considerable research attention for biomedical applications owing to their advantages as compared with fluorescent inorganic nanoparticles and small organic molecules. In this study, we presented an efficient, facile and environment-friendly strategy to produce polymer-FONs, which relied on the self-polymerization of dopamine and polyethyleneimine (PEI) in rather mild conditions. To obtain the final polymer-FONs, aldehyde group-containing copolymers (named as poly(UA-co-PEGMA)) were synthesized by reversible addition-fragmentation chain-transfer polymerization using polyethylene glycol methyl ether methacrylate (PEGMA) and 1-undecen-10-al (UA) as monomers. The dopamine was conjugated onto poly(UA-co-PEGMA) through a multicomponent reaction between UA and dopamine to obtain poly(UA-co-PEGMA)-DA, which was further utilized for preparation of polymer-FONs through self-polymerization of dopamine and PEI. 1 H nuclear magnetic resonance, Fourier transform infrared spectroscopy, transmission electron microscopy and fluorescence spectroscopy were employed to characterize the structure, morphology, compositions and optical properties of these polymer-FONs. Cell viability and cell uptake behavior results suggested that these polymer-FONs possess good biocompatibility and can be potentially utilized for biomedical applications. More importantly, the method can be also applied to fabricate many other multifunctional polymer-FONs with great potential for biomedical applications. Copyright © 2017 Elsevier B.V. All rights reserved.

Fluorescence and amplified spontaneous emission of glass forming compounds containing styryl-4H-pyran-4-ylidene fragment

Energy Technology Data Exchange (ETDEWEB)

Vembris, Aivars, E-mail: aivars.vembris@cfi.lu.lv [Institute of Solid State Physics, University of Latvia, 8 Kengaraga Street, Riga LV-1063 (Latvia); Muzikante, Inta [Institute of Solid State Physics, University of Latvia, 8 Kengaraga Street, Riga LV-1063 (Latvia); Karpicz, Renata; Sliauzys, Gytis [Institute of Physics, Center for Physical Sciences and Technology, A. Gostauto 11, LT-01108 Vilnius (Lithuania); Miasojedovas, Arunas; Jursenas, Saulius [Institute of Applied Research, Vilnius University, Sauletekio 9-III, LT-10222 Vilnius (Lithuania); Gulbinas, Vidmantas [Institute of Physics, Center for Physical Sciences and Technology, A. Gostauto 11, LT-01108 Vilnius (Lithuania)

2012-09-15

Potential of glassy films of newly synthesised low molecular weight organic molecules for light amplification and lasing applications has been investigated by analysing fluorescence, transient differential absorption and amplified spontaneous emission properties. These non-symmetric and symmetric molecules contain styryl-4H-pyran-4-ylidene fragment with three different electron acceptor groups: dicyanomethylene, barbituric acid, indene-1,3-dione. Fluorescence quantum yields of the investigated compounds in solutions are between 0.32 and 0.54, while they drop down by an order of magnitude in thin solid films. Incorporation of bulky side groups reduced excitonic interactions enabling manifestation of amplified spontaneous emission in the neat films of the investigated derivatives. - Highlights: Black-Right-Pointing-Pointer Bulky substituents attached to DCM dye enable formation of neat glassy films. Black-Right-Pointing-Pointer Investigated dyes show amplified spontaneous emission in neat films. Black-Right-Pointing-Pointer Two electron donor groups negatively influence light amplification.

Small UAS Analysis of Laser Designation and Search and Target Acquisition Capabilities in an Urban Environment

National Research Council Canada - National Science Library

Harclerode, Eric

2008-01-01

Conclusions: -Small UAS has extreme difficulty lasing moving targets in high density urban environments -Lasing moving targets in medium density terrain is possible but not certain -Lasing of stationary targets...

Cells exposed to a huntingtin fragment containing an expanded polyglutamine tract show no sign of ion channel formation: results arguing against the ion channel hypothesis

DEFF Research Database (Denmark)

Nørremølle, Anne; Grunnet, Morten; Hasholt, Lis

2003-01-01

Ion channels formed by expanded polyglutamine tracts have been proposed to play an important role in the pathological processes leading to neurodegeneration in Huntington's disease and other CAG repeat diseases. We tested the capacity of a huntingtin fragment containing an expanded polyglutamine...... in the currents recorded in any of the two expression systems, indicating no changes in ion channel activity. The results therefore argue against the proposed hypothesis of expanded polyglutamines forming ion channels....

Trajectory Management of the Unmanned Aircraft System (UAS in Emergency Situation

Directory of Open Access Journals (Sweden)

Andrzej Majka

2015-05-01

Full Text Available Unmanned aircraft must be characterized by a level of safety, similar to that of manned aircraft, when performing flights over densely populated areas. Dangerous situations or emergencies are frequently connected with the necessity to change the profiles and parameters of a flight as well as the flight plans. The aim of this work is to present the methods used to determine an Unmanned Aircraft System’s (UAS flight profile after a dangerous situation or emergency occurs. The analysis was limited to the possibility of an engine system emergency and further flight continuing along a trajectory of which the shape depends on the type of the emergency. The suggested method also enables the determination of an optimal flying trajectory, based on the territory of a special protection zone (for example, large populated areas, in the case of an emergency that would disable continuation of the performed task. The method used in this work allows researchers, in a simplified way, to solve a variation task using the Ritz–Galerkin method, consisting of an approximate solution of the boundary value problem to determine the optimal flight path. The worked out method can become an element of the on-board system supporting UAS flight control.

Halogeno-substituted 2-aminobenzoic acid derivatives for negative ion fragmentation studies of N-linked carbohydrates.

Science.gov (United States)

Harvey, David J

2005-01-01

Negative ion electrospray mass spectra of high-mannose N-linked glycans derivatised with 2-aminobenzoic acids and ionised from solutions containing ammonium hydroxide gave prominent [M-H](-) ions accompanied by weaker [M-2H](2-) ions. Fragmentation of both types of ions gave prominent singly charged glycosidic cleavage ions containing the derivatised reducing terminus and ions from the non-reducing terminus that appeared to be products of cross-ring cleavages. Differentiation of these two groups of ions was conveniently achieved in a single spectrum by use of chloro- or bromo-substituted benzoic acids in order to label ions containing the derivative with an atom with a distinctive isotope pattern. Fragmentation of the doubly charged ions gave more abundant fragments, both singly and doubly charged, than did fragmentation of the singly charged ions, but information of chain branching was masked by the appearance of prominent ions produced by internal cleavages. Copyright (c) 2005 John Wiley & Sons, Ltd.

Combining Spectral Data and a DSM from UAS-Images for Improved Classification of Non-Submerged Aquatic Vegetation

Directory of Open Access Journals (Sweden)

Eva Husson

2017-03-01

Full Text Available Monitoring of aquatic vegetation is an important component in the assessment of freshwater ecosystems. Remote sensing with unmanned aircraft systems (UASs can provide sub-decimetre-resolution aerial images and is a useful tool for detailed vegetation mapping. In a previous study, non-submerged aquatic vegetation was successfully mapped using automated classification of spectral and textural features from a true-colour UAS-orthoimage with 5-cm pixels. In the present study, height data from a digital surface model (DSM created from overlapping UAS-images has been incorporated together with the spectral and textural features from the UAS-orthoimage to test if classification accuracy can be improved further. We studied two levels of thematic detail: (a Growth forms including the classes of water, nymphaeid, and helophyte; and (b dominant taxa including seven vegetation classes. We hypothesized that the incorporation of height data together with spectral and textural features would increase classification accuracy as compared to using spectral and textural features alone, at both levels of thematic detail. We tested our hypothesis at five test sites (100 m × 100 m each with varying vegetation complexity and image quality using automated object-based image analysis in combination with Random Forest classification. Overall accuracy at each of the five test sites ranged from 78% to 87% at the growth-form level and from 66% to 85% at the dominant-taxon level. In comparison to using spectral and textural features alone, the inclusion of height data increased the overall accuracy significantly by 4%–21% for growth-forms and 3%–30% for dominant taxa. The biggest improvement gained by adding height data was observed at the test site with the most complex vegetation. Height data derived from UAS-images has a large potential to efficiently increase the accuracy of automated classification of non-submerged aquatic vegetation, indicating good possibilities

UAS imaging for automated crop lodging detection: a case study over an experimental maize field

Science.gov (United States)

Chu, Tianxing; Starek, Michael J.; Brewer, Michael J.; Masiane, Tiisetso; Murray, Seth C.

2017-05-01

Lodging has been recognized as one of the major destructive factors for crop quality and yield, particularly in corn. A variety of contributing causes, e.g. disease and/or pest, weather conditions, excessive nitrogen, and high plant density, may lead to lodging before harvesting season. Traditional lodging detection strategies mainly rely on ground data collection, which is insufficient in efficiency and accuracy. To address this problem, this research focuses on the use of unmanned aircraft systems (UAS) for automated detection of crop lodging. The study was conducted over an experimental corn field at the Texas A and M AgriLife Research and Extension Center at Corpus Christi, Texas, during the growing season of 2016. Nadir-view images of the corn field were taken by small UAS platforms equipped with consumer grade RGB and NIR cameras on a per week basis, enabling a timely observation of the plant growth. 3D structural information of the plants was reconstructed using structure-from-motion photogrammetry. The structural information was then applied to calculate crop height, and rates of growth. A lodging index for detecting corn lodging was proposed afterwards. Ground truth data of lodging was collected on a per row basis and used for fair assessment and tuning of the detection algorithm. Results show the UAS-measured height correlates well with the ground-measured height. More importantly, the lodging index can effectively reflect severity of corn lodging and yield after harvesting.

Combined Use of Zoledronic Acid Augments Ursolic Acid-Induced Apoptosis in Human Osteosarcoma Cells through Enhanced Oxidative Stress and Autophagy

Directory of Open Access Journals (Sweden)

Chia-Chieh Wu

2016-11-01

Full Text Available Ursolic acid (UA, a naturally occurring pentacyclic triterpene acid found in many medicinal herbs and edible plants, triggers apoptosis in several tumor cell lines but not in human bone cancer cells. Most recently, we have demonstrated that UA exposure reduces the viability of human osteosarcoma MG-63 cells through enhanced oxidative stress and apoptosis. Interestingly, an inhibitor of osteoclast-mediated bone resorption, zoledronic acid (ZOL, also a third-generation nitrogen-containing bisphosphonate, is effective in the treatment of bone metastases in patients with various solid tumors. In this present study, we found that UA combined with ZOL to significantly suppress cell viability, colony formation, and induce apoptosis in two lines of human osteosarcoma cells. The pre-treatment of the antioxidant had reversed the oxidative stress and cell viability inhibition in the combined treatment, indicating that oxidative stress is important in the combined anti-tumor effects. Moreover, we demonstrated that ZOL combined with UA significantly induced autophagy and co-administration of autophagy inhibitor reduces the growth inhibitory effect of combined treatment. Collectively, these data shed light on the pathways involved in the combined effects of ZOL and UA that might serve as a potential therapy against osteosarcoma.

A10 – UAS Control Station Ergo-nomics Considerations : Tasks CS-6 through CS-8

Science.gov (United States)

2017-08-01

The overall objective of the control station tasks within Project A-10 is to provide the Federal Aviation Administration (FAA) with information on an ergonomic design of unmanned aircraft system (UAS) control stations which will allow safe piloting o...

Heavy quark fragmentation functions in the heavy quark effective theory

International Nuclear Information System (INIS)

Martynenko, A.P.; Saleev, V.A.

1996-01-01

The fragmentation of b-bar-antiquark into polarized B c * -mesons and b-quark into P-wave (c-bar b) states in the Heavy Quark Effective Theory. The heavy quark fragmentation functions in longitudinally and transversely polarized S-wave b-bar c-states and P-wave mesons containing b-, c-quarks also, with the exact account of corrections of first order in 1/m b . 20 refs., 2 figs

Framing Fragmentation

DEFF Research Database (Denmark)

Bundgaard, Charlotte

2009-01-01

Contemporary industrialized architecture based on advanced information technology and highly technological production processes, implies a radically different approach to architecture than what we have experienced in the past. Works of architecture composed of prefabricated building components......, contain distinctive architectural traits, not only based on rational repetition, but also supporting composition and montage as dynamic concepts. Prefab architecture is an architecture of fragmentation, individualization and changeability, and this sets up new challenges for the architect. This paper...... tries to develop a strategy for the architect dealing with industrially based architecture; a strategy which exploits architectural potentials in industrial building, which recognizes the rules of mass production and which redefines the architect’s position among the agents of building. If recent...

Anaphylaxis to gelatin-containing rectal suppositories.

Science.gov (United States)

Sakaguchi, M; Inouye, S

2001-12-01

Some children--though the number is few-have been sensitized with gelatin. To investigate the relationship between the presence of antigelatin IgE and anaphylaxis to gelatin-containing rectal suppository, we measured antigelatin IgE in the sera of the children with anaphylaxis. Ten children showed systemic allergic reactions, including anaphylaxis, to a chloral hydrate rectal suppository containing gelatin (231 mg/dose) that had been used as a sedative. These children's clinical histories and serum samples were submitted from physicians to the National Institute of Infectious Diseases during a 2-year period from 1996 to 1997. Of the 10 children, 5 showed apparent anaphylaxis, including hypotension and/or cyanosis, along with urticaria or wheezing; 2 showed both urticaria and wheezing without hypotension or cyanosis; the other 3 showed only urticaria. All of the children had antigelatin IgE (mean value +/- SD, 7.9 +/- 8.4 Ua/mL). As a control, samples from 250 randomly selected children had no antigelatin IgE. These findings suggest that the 10 children's systemic allergic reactions to this suppository were caused by the gelatin component. Gelatin-containing suppositories must be used with the same caution as gelatin-containing vaccines and other medications.

Charge distribution in the ternary fragmentation of {sup 252}Cf

Energy Technology Data Exchange (ETDEWEB)

Senthil Kannan, M.T.; Balasubramaniam, M. [Bharathiar University, Department of Physics, Coimbatore (India)

2017-08-15

We present here, for the first time, a study on ternary fragmentation charge distribution of {sup 252}Cf using the convolution integral method and the statistical theory. The charge distribution for all possible charge combinations of a ternary breakup are grouped as a bin containing different mass partitions. Different bins corresponding to various third fragments with mass numbers from A{sub 3} = 16 to 84 are identified with the available experimental masses. The corresponding potential energy surfaces are calculated using the three cluster model for the two arrangements A{sub 1} + A{sub 2} + A{sub 3} and A{sub 1} + A{sub 3} + A{sub 2}. The ternary fragmentation yield values are calculated for the ternary combination from each bin possessing minimum potential energy. The yields of the resulting ternary combinations as a function of the charge numbers of the three fragments are analyzed for both the arrangements. The calculations are carried out at different excitation energies of the parent nucleus. For each excitation energy the temperature of the three fragments are iteratively computed conserving the total energy. The distribution of fragment temperatures corresponding to different excitation energies for some fixed third fragments are discussed. The presence of the closed shell nucleus Sn in the favourable ternary fragmentation is highlighted. (orig.)

DNA fragmentation and cell death mediated by T cell antigen receptor/CD3 complex on a leukemia T cell line.

Science.gov (United States)

Takahashi, S; Maecker, H T; Levy, R

1989-10-01

An anti-T cell receptor (TcR) monoclonal antibody (mAb), LC4, directed against a human leukemic T cell line, SUP-T13, caused DNA fragmentation ("apoptosis") and cell death upon binding to this cell line. Cross-linking of receptor molecules was necessary for this effect since F(ab')2, but not Fab', fragments of LC4 could induce cell death. Five anti-CD3 mAb tested also caused apoptosis, but only when they were presented on a solid phase. Interestingly, soluble anti-CD3 mAb induced calcium flux and had an additive effect on the calcium flux and interleukin 2 receptor expression induced by LC4, but these anti-CD3 mAb reversed the growth inhibition and apoptosis caused by LC4. The calcium ionophore A23187, but not the protein kinase C activator phorbol 12-myristate 13-acetate (PMA), also induced apoptosis, suggesting that protein kinase C activation alone does not cause apoptosis, although PMA is growth inhibitory. These results suggest that two distinct biological phenomena can accompany stimulation of the TcR/CD3 complex. In both cases, calcium flux and interleukin 2 receptor expression is induced, but only in one case is apoptosis and cell death seen. The signal initiating apoptosis can be selectively prevented by binding CD3 portion of the receptor in this cell line. This difference in signals mediated by the TcR/CD3 complex may be important in explaining the process of thymic selection, as well as in choosing anti-TcR mAb for therapeutic use.

Microfabricated disposable nanosensor based on CdSe quantum dot/ionic liquid-mediated hollow fiber-pencil graphite electrode for simultaneous electrochemical quantification of uric acid and creatinine in human samples

Energy Technology Data Exchange (ETDEWEB)

Hooshmand, Sara; Es' haghi, Zarrin, E-mail: eshaghi@pnu.ac.ir

2017-06-15

In this research, a novel sensitive electrochemical nanosensor based on the cadmium selenide quantum dots (QDs)/ionic liquid mediated hollow fiber-pencil graphite electrode (HF-PGE) was prepared and applied for simultaneous determination of uric acid (UA) and creatinine (Crn) in urine and serum samples. The electrocatalytic oxidation of the analytes was investigated via differential pulse (DPV) and cyclic voltammetry (CV). The experiments were designed, in two different steps, according to Taguchi's method; OA9 L9 (3{sup 3}) and OA9 L9 (3{sup 4}) orthogonal array to optimize experimental runs. The results revealed that the electrode response was initially influenced by the types of sensor and types of ionic liquids and their ratios. The amount of QD, buffer pH, equilibration time and scan rate also influenced electrode response efficiency. According to the results of Taguchi analysis, the amount of tetra phenyl phosphonium chloride (TPPC) and QD were the most influencing parameters on the yield response of the modified electrodes. Linear ranges were obtained between 0.297–2.970 × 10{sup 3} and 0.442–8.840 × 10{sup 3} μM, with the detection limits of 0.083 and 0.229 μM and relative standard deviations (RSD) of 2.4% and 1.8%, for UA and Crn, respectively. Finally, the proposed method was successfully examined for simultaneous determination of UA and Crn in human urine and serum samples. - Highlights: • Sensor based on modified CdSe quantum dot/ionic liquid mediated hollow fiber graphite electrode. • One-step simultaneous purification, pre-concentration, extraction, back-extraction and determination of electroactive analytes. • Target analyte uric acid (UA) and creatinine (Crn) in urine and serum samples. • Disposable nature of sensor reduced risk of carry-over.

Glucose-6-phosphate dehydrogenase is required for hpa1xoo (harpin protein fragment)-mediated salt stress tolerance in transgenic arabidopsis thaliana

International Nuclear Information System (INIS)

Sang, S.L.; Xie, L.L.; Cui, X.W.; Wang, Z.Y.

2018-01-01

Harpin induces salicylic acid and abscisic acid signaling in plants under biotic and abiotic stress, respectively. Our previous report showed that the effective harpin fragment Hpa1xoo enhanced H2O2 production and pathogen resistance in a transgenic Arabidopsis mutant. In this study, we examined contents of thiobarbituric acid reactive substance (TBARS), H2O2 and glutathione, and glucose-6-phosphate dehydrogenase (G6PDH), glutathione reductase (GR) and glutathione peroxidase (GPX) enzyme activity in Hpa1xoo-expressing Arabidopsis under salt stress. The results revealed increased amounts of TBARS and H2O2 in wild-type (WT) compared to mutant plants under salt stress conditions. In contrast, increased levels were observed in the mutant under stress-free conditions. Moreover, a higher reduced glutathione (GSH) content and ratio of GSH/oxidized glutathione (GSSG) was observed in mutant compared to WT plants under both stress-free and salt stress conditions. In addition, mutant plants exhibited significantly higher G6PDH, GR and GPX activity than WT plants under salt stress. Suppression of G6PDH activity via 6-aminonicotinamide (6-AN, a specific inhibitor of G6PDH) was partly reversed by L-buthionine-sulfoximine (BSO, a specific inhibitor of GSH regeneration) and aggravated by GSH. Combined with previous reports, these findings suggest that the G6PDH enzyme plays a key role in harpin fragment (Hpa1xoo)-mediated salt stress tolerance in transgenic Arabidopsis. (author)

Nanoparticle-mediated rhodopsin cDNA but not intron-containing DNA delivery causes transgene silencing in a rhodopsin knockout model.

Science.gov (United States)

Zheng, Min; Mitra, Rajendra N; Filonov, Nazar A; Han, Zongchao

2016-03-01

Previously, we compared the efficacy of nanoparticle (NP)-mediated intron-containing rhodopsin (sgRho) vs. intronless cDNA in ameliorating retinal disease phenotypes in a rhodopsin knockout (RKO) mouse model of retinitis pigmentosa. We showed that NP-mediated sgRho delivery achieved long-term expression and phenotypic improvement in RKO mice, but not NP housing cDNA. However, the protein level of the NP-sgRho construct was only 5-10% of wild-type at 8 mo postinjection. To have a better understanding of the reduced levels of long-term expression of the vectors, in the present study, we evaluated the epigenetic changes of subretinal delivering NP-cDNA vs. NP-sgRho in the RKO mouse eyes. Following the administration, DNA methylation and histone status of specific regions (bacteria plasmid backbone, promoter, rhodopsin gene, and scaffold/matrix attachment region) of the vectors were evaluated at various time points. We documented that epigenetic transgene silencing occurred in vector-mediated gene transfer, which were caused by the plasmid backbone and the cDNA of the transgene, but not the intron-containing transgene. No toxicity or inflammation was found in the treated eyes. Our results suggest that cDNA of the rhodopsin transgene and bacteria backbone interfered with the host defense mechanism of DNA methylation-mediated transgene silencing through heterochromatin-associated modifications. © FASEB.

NF-κB Mediates the Stimulation of Cytokine and Chemokine Expression by Human Articular Chondrocytes in Response to Fibronectin Fragments1

Science.gov (United States)

Pulai, Judit I.; Chen, Hong; Im, Hee-Jeong; Kumar, Sanjay; Hanning, Charles; Hegde, Priti S.; Loeser, Richard F.

2010-01-01

Fibronectin fragments (FN-f) that bind to the α5β1 integrin stimulate chondrocyte-mediated cartilage destruction and could play an important role in the progression of arthritis. The objective of this study was to identify potential cytokine mediators of cartilage inflammation and destruction induced by FN-f and to investigate the mechanism of their stimulation. Human articular chondrocytes, isolated from normal ankle cartilage obtained from tissue donors, were treated with a 110-kDa FN-f in serum-free culture, and expression of various cytokine genes was analyzed by cDNA microarray and by a cytokine protein array. Compared with untreated control cultures, stimulation by FN-f resulted in a >2-fold increase in IL-6, IL-8, MCP-1, and growth-related oncogene β (GRO-β). Constitutive and FN-f-inducible expression of GRO-α and GRO-γ were also noted by RT-PCR and confirmed by immunoblotting. Previous reports of IL-1β expression induced by FN-f were also confirmed, while TNF expression was found to be very low. Inhibitor studies revealed that FN-f-induced stimulation of chondrocyte chemokine expression was dependent on NF-κB activity, but independent of IL-1 autocrine signaling. The ability of FN-f to stimulate chondrocyte expression of multiple proinflammatory cytokines and chemokines suggests that damage to the cartilage matrix is capable of inducing a proinflammatory state responsible for further progressive matrix destruction, which also includes the chemoattraction of inflammatory cells. Targeting the signaling pathways activated by FN-f may be an effective means of inhibiting production of multiple mediators of cartilage destruction. PMID:15843581

Studies of the phase transitions in UAs with neutron scattering

International Nuclear Information System (INIS)

Sinha, S.K.; Lander, G.H.; Shapiro, S.M.; Vogt, O.

1980-01-01

Uranium arsenide is known to order with the type-I antiferromagnetic (AF) structure at approx. 126 K, and exhibit a first-order transition to the type-IA AF structure at T/sub N//2. We have now reexamined these transitions with a single crystal. Above T/sub N/ UAs exhibits critical scattering suggesting a tendency to order with an incommensurate wavevector, but then suddenly orders with the AF-I structure. The analysis of the data shows the need to consider anisotropic exchange interactions of cubic symmetry between U moments

Immunogenic properties of Streptococcus agalactiae FbsA fragments.

Directory of Open Access Journals (Sweden)

Salvatore Papasergi

Full Text Available Several species of Gram-positive bacteria can avidly bind soluble and surface-associated fibrinogen (Fng, a property that is considered important in the pathogenesis of human infections. To gain insights into the mechanism by which group B Streptococcus (GBS, a frequent neonatal pathogen, interacts with Fng, we have screened two phage displayed genomic GBS libraries. All of the Fng-binding phage clones contained inserts encoding fragments of FbsA, a protein displaying multiple repeats. Since the functional role of this protein is only partially understood, representative fragments were recombinantly expressed and analyzed for Fng binding affinity and ability to induce immune protection against GBS infection. Maternal immunization with 6pGST, a fragment containing five repeats, significantly protected mouse pups against lethal GBS challenge and these protective effects could be recapitulated by administration of anti-6pGST serum from adult animals. Notably, a monoclonal antibody that was capable of neutralizing Fng binding by 6pGST, but not a non-neutralizing antibody, could significantly protect pups against lethal GBS challenge. These data suggest that FbsA-Fng interaction promotes GBS pathogenesis and that blocking such interaction is a viable strategy to prevent or treat GBS infections.

Jet fragmentation

International Nuclear Information System (INIS)

Saxon, D.H.

1985-10-01

The paper reviews studies on jet fragmentation. The subject is discussed under the topic headings: fragmentation models, charged particle multiplicity, bose-einstein correlations, identified hadrons in jets, heavy quark fragmentation, baryon production, gluon and quark jets compared, the string effect, and two successful models. (U.K.)

Lower sperm DNA fragmentation after r-FSH administration in functional hypogonadotropic hypogonadism.

Science.gov (United States)

Ruvolo, Giovanni; Roccheri, Maria Carmela; Brucculeri, Anna Maria; Longobardi, Salvatore; Cittadini, Ettore; Bosco, Liana

2013-04-01

An observational clinical and molecular study was designed to evaluate the effects of the administration of recombinant human FSH on sperm DNA fragmentation in men with a non-classical form of hypogonadotropic hypogonadism and idiopathic oligoasthenoteratozoospermia. In the study were included 53 men with a non-classical form of hypogonadotropic hypogonadism and idiopathic oligoasthenoteratozoospermia. In all patients, sperm DNA fragmentation index (DFI), assessed by terminal deoxynucleotidyl transferase-mediated deoxyuridine triphosphate (dUTP) in situ DNA nick end-labelling (TUNEL) assay, was evaluated before starting the treatment with 150 IU of recombinant human FSH, given three times a week for at least 3 months. Patients' semen analysis and DNA fragmentation index were re-evaluated after the 3-month treatment period. After recombinant human FSH therapy, we did not find any differences in terms of sperm count, motility and morphology. The average DNA fragmentation index was significantly reduced (21.15 vs 15.2, p15 %), while no significant variation occurred in the patients with DFI values ≤ 15 %. Recombinant human FSH administration improves sperm DNA integrity in hypogonadotropic hypogonadism and idiopathic oligoasthenoteratozoospermia men with DNA fragmentation index value >15 % .

Antibody Fragments as Potential Biopharmaceuticals for Cancer Therapy: Success and Limitations.

Science.gov (United States)

Kholodenko, Roman V; Kalinovsky, Daniel V; Doronin, Igor I; Ponomarev, Eugene D; Kholodenko, Irina V

2017-08-17

Monoclonal antibodies (mAbs) are an important class of therapeutic agents approved for the therapy of many types of malignancies. However, in certain cases applications of conventional mAbs have several limitations in anticancer immunotherapy. These limitations include insufficient efficacy and adverse effects. The antigen-binding fragments of antibodies have a considerable potential to overcome the disadvantages of conventional mAbs, such as poor penetration into solid tumors and Fc-mediated bystander activation of the immune system. Fragments of antibodies retain antigen specificity and part of functional properties of conventional mAbs and at the same time have much better penetration into the tumors and a greatly reduced level of adverse effects. Recent advantages in antibody engineering allowed to produce different types of antibody fragments with improved structure and properties for efficient elimination of tumor cells. These molecules opened up new perspectives for anticancer therapy. Here we will overview the structural features of the various types of antibody fragments and their applications for anticancer therapy as separate molecules and as part of complex conjugates or structures. Mechanisms of antitumor action of antibody fragments as well as their advantages and disadvantages for clinical application will be discussed in this review. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

Records of Mesoproterozoic taphrogenic events in the eastern basement of the Araçuaí Orogen, southeast Brazil

Directory of Open Access Journals (Sweden)

Tobias Maia Rabelo Fonte-Boa

Full Text Available ABSTRACT: The history of palaeocontinents alternates long fragmentation to drift periods with relatively short agglutination intervals. One of the products of a Rhyacian-Orosirian orogeny was a palaeocontinent that brought together the basement of the Araçuaí-West Congo orogen (AWCO with regions now located in the São Francisco and Congo cratons. From ca. 2 Ga to ca. 0.7 Ga, this large region of the São Francisco-Congo palaeocontinent was spared of orogenic events, but underwent at least five taphrogenic events recorded by anorogenic magmatism and/or sedimentation. The taphrogenic events are well documented in the AWCO proximal portions and neighboring cratonic regions, but lack evidence in the AWCO high-grade core. Our studies on amphibolites intercalated in the Rhyacian Pocrane complex, basement of the Rio Doce magmatic arc, allowed to the recognition of two Mesoproterozoic taphrogenic episodes. The oldest one, a Calymmian episode, is recorded by amphibolites with a zircon magmatic crystallization age at 1529 ± 37 Ma (U-Pb SHRIMP, and lithochemical signature of basaltic magmatism related to continental intraplate settings. Another set of amphibolite bodies records the youngest taphrogenic episode, a Stenian event, with a zircon magmatic crystallization age at 1096 ± 20 Ma (U-Pb SHRIMP, and lithochemical signature similar to mature magmatism of continental rift setting. The Calymmian episode (ca. 1.5 Ga correlates to the Espinhaço II basin stage and mafic dikes of the northern Espinhaço, Chapada Diamantina and Curaçá domains, while the Stenian episode (ca. 1.1 Ga correlates to the Espinhaço III basin stage. We also present U-Pb data for 87 detrital zircon grains from a quartzite lens intercalated in the Pocrane complex, the Córrego Ubá quartzite. Its age spectrum shows main peaks at 1176 ± 21 Ma (35%, 1371 ± 30 Ma (18%, 1536 ± 22 Ma (19%, 1803 ± 36 Ma (17% and 1977 ± 38 Ma (12%, suggesting a Stenian (ca. 1176 Ma maximum

Extracellular matrix fragmentation in young, healthy cartilaginous tissues.

Science.gov (United States)

Craddock, R J; Hodson, N W; Ozols, M; Shearer, T; Hoyland, J A; Sherratt, M J

2018-02-09

Although the composition and structure of cartilaginous tissues is complex, collagen II fibrils and aggrecan are the most abundant assemblies in both articular cartilage (AC) and the nucleus pulposus (NP) of the intervertebral disc (IVD). Whilst structural heterogeneity of intact aggrecan ( containing three globular domains) is well characterised, the extent of aggrecan fragmentation in healthy tissues is poorly defined. Using young, yet skeletally mature (18-30 months), bovine AC and NP tissues, it was shown that, whilst the ultrastructure of intact aggrecan was tissue-dependent, most molecules (AC: 95 %; NP: 99.5 %) were fragmented (lacking one or more globular domains). Fragments were significantly smaller and more structurally heterogeneous in the NP compared with the AC (molecular area; AC: 8543 nm2; NP: 4625 nm2; p tissue-invariant. Molecular fragmentation is considered indicative of a pathology; however, these young, skeletally mature tissues were histologically and mechanically (reduced modulus: AC: ≈ 500 kPa; NP: ≈ 80 kPa) comparable to healthy tissues and devoid of notable gelatinase activity (compared with rat dermis). As aggrecan fragmentation was prevalent in neonatal bovine AC (99.5 % fragmented, molecular area: 5137 nm2) as compared with mature AC (95.0 % fragmented, molecular area: 8667 nm2), it was hypothesised that targeted proteolysis might be an adaptive process that modified aggrecan packing (as simulated computationally) and, hence, tissue charge density, mechanical properties and porosity. These observations provided a baseline against which pathological and/or age-related fragmentation of aggrecan could be assessed and suggested that new strategies might be required to engineer constructs that mimic the mechanical properties of native cartilaginous tissues.

Fragger: a protein fragment picker for structural queries [version 2; referees: 2 approved

Directory of Open Access Journals (Sweden)

Francois Berenger

2018-04-01

Full Text Available Protein modeling and design activities often require querying the Protein Data Bank (PDB with a structural fragment, possibly containing gaps. For some applications, it is preferable to work on a specific subset of the PDB or with unpublished structures. These requirements, along with specific user needs, motivated the creation of a new software to manage and query 3D protein fragments. Fragger is a protein fragment picker that allows protein fragment databases to be created and queried. All fragment lengths are supported and any set of PDB files can be used to create a database. Fragger can efficiently search a fragment database with a query fragment and a distance threshold. Matching fragments are ranked by distance to the query. The query fragment can have structural gaps and the allowed amino acid sequences matching a query can be constrained via a regular expression of one-letter amino acid codes. Fragger also incorporates a tool to compute the backbone RMSD of one versus many fragments in high throughput. Fragger should be useful for protein design, loop grafting and related structural bioinformatics tasks.

The UA1 trigger processor

International Nuclear Information System (INIS)

Grayer, G.H.

1981-01-01

Experiment UA1 is a large multi-purpose spectrometer at the CERN proton-antiproton collider, scheduled for late 1981. The principal trigger is formed on the basis of the energy deposition in calorimeters. A trigger decision taken in under 2.4 microseconds can avoid dead time losses due to the bunched nature of the beam. To achieve this we have built fast 8-bit charge to digital converters followed by two identical digital processors tailored to the experiment. The outputs of groups of the 2440 photomultipliers in the calorimeters are summed to form a total of 288 input channels to the ADCs. A look-up table in RAM is used to convert the digitised photomultiplier signals to energy in one processor, combinations of input channels, and also counts the number of clusters with electromagnetic or hadronic energy above pre-determined levels. Up to twelve combinations of these conditions, together with external information, may be combined in coincidence or in veto to form the final trigger. Provision has been made for testing using simulated data in an off-line mode, and sampling real data when on-line. (orig.)

Potential for drug interactions mediated by polymorphic flavin-containing monooxygenase 3 in human livers.

Science.gov (United States)

Shimizu, Makiko; Shiraishi, Arisa; Sato, Ayumi; Nagashima, Satomi; Yamazaki, Hiroshi

2015-02-01

Human flavin-containing monooxygenase 3 (FMO3) in the liver catalyzes a variety of oxygenations of nitrogen- and sulfur-containing medicines and xenobiotic substances. Because of growing interest in drug interactions mediated by polymorphic FMO3, benzydamine N-oxygenation by human FMO3 was investigated as a model reaction. Among the 41 compounds tested, trimethylamine, methimazole, itopride, and tozasertib (50 μM) suppressed benzydamine N-oxygenation at a substrate concentration of 50 μM by approximately 50% after co-incubation. Suppression of N-oxygenation of benzydamine, trimethylamine, itopride, and tozasertib and S-oxygenation of methimazole and sulindac sulfide after co-incubation with the other five of these six substrates was compared using FMO3 proteins recombinantly expressed in bacterial membranes. Apparent competitive inhibition by methimazole (0-50 μM) of sulindac sulfide S-oxygenation was observed with FMO3 proteins. Sulindac sulfide S-oxygenation activity of Arg205Cys variant FMO3 protein was likely to be suppressed more by methimazole than wild-type or Val257Met variant FMO3 protein was. These results suggest that genetic polymorphism in the human FMO3 gene may lead to changes of drug interactions for N- or S-oxygenations of xenobiotics and endogenous substances and that a probe battery system of benzydamine N-oxygenation and sulindac sulfide S-oxygenation activities is recommended to clarify the drug interactions mediated by FMO3. Copyright © 2014 The Japanese Society for the Study of Xenobiotics. Published by Elsevier Ltd. All rights reserved.

Vertical Sampling Scales for Atmospheric Boundary Layer Measurements from Small Unmanned Aircraft Systems (sUAS

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Benjamin L. Hemingway

2017-09-01

Full Text Available The lowest portion of the Earth’s atmosphere, known as the atmospheric boundary layer (ABL, plays an important role in the formation of weather events. Simple meteorological measurements collected from within the ABL, such as temperature, pressure, humidity, and wind velocity, are key to understanding the exchange of energy within this region, but conventional surveillance techniques such as towers, radar, weather balloons, and satellites do not provide adequate spatial and/or temporal coverage for monitoring weather events. Small unmanned aircraft, or aerial, systems (sUAS provide a versatile, dynamic platform for atmospheric sensing that can provide higher spatio-temporal sampling frequencies than available through most satellite sensing methods. They are also able to sense portions of the atmosphere that cannot be measured from ground-based radar, weather stations, or weather balloons and have the potential to fill gaps in atmospheric sampling. However, research on the vertical sampling scales for collecting atmospheric measurements from sUAS and the variabilities of these scales across atmospheric phenomena (e.g., temperature and humidity is needed. The objective of this study is to use variogram analysis, a common geostatistical technique, to determine optimal spatial sampling scales for two atmospheric variables (temperature and relative humidity captured from sUAS. Results show that vertical sampling scales of approximately 3 m for temperature and 1.5–2 m for relative humidity were sufficient to capture the spatial structure of these phenomena under the conditions tested. Future work is needed to model these scales across the entire ABL as well as under variable conditions.

General-Purpose Heat Source development: Safety Verification Test Program. Bullet/fragment test series

Energy Technology Data Exchange (ETDEWEB)

George, T.G.; Tate, R.E.; Axler, K.M.

1985-05-01

The radioisotope thermoelectric generator (RTG) that will provide power for space missions contains 18 General-Purpose Heat Source (GPHS) modules. Each module contains four /sup 238/PuO/sub 2/-fueled clads and generates 250 W/sub (t)/. Because a launch-pad or post-launch explosion is always possible, we need to determine the ability of GPHS fueled clads within a module to survive fragment impact. The bullet/fragment test series, part of the Safety Verification Test Plan, was designed to provide information on clad response to impact by a compact, high-energy, aluminum-alloy fragment and to establish a threshold value of fragment energy required to breach the iridium cladding. Test results show that a velocity of 555 m/s (1820 ft/s) with an 18-g bullet is at or near the threshold value of fragment velocity that will cause a clad breach. Results also show that an exothermic Ir/Al reaction occurs if aluminum and hot iridium are in contact, a contact that is possible and most damaging to the clad within a narrow velocity range. The observed reactions between the iridium and the aluminum were studied in the laboratory and are reported in the Appendix.

Antihypertensive effects of continuous oral administration of nattokinase and its fragments in spontaneously hypertensive rats.

Science.gov (United States)

Fujita, Mitsugu; Ohnishi, Katsunori; Takaoka, Shinsaku; Ogasawara, Kazuya; Fukuyama, Ryo; Nakamuta, Hiromichi

2011-01-01

To determine whether the antihypertensive effect of nattokinase is associated with the protease activity of this enzyme, we compared nattokinase with the fragments derived from nattokinase, which possessed no protease activity, in terms of the effect on hypertension in spontaneously hypertensive rats (SHR). In the continuous oral administration test, the groups were given a basic diet alone (control), the basic diet containing nattokinase (0.2, 2.6 mg/g diet) or the basic diet containing the fragments derived from nattokinase (0.2, 0.6 mg/g diet). The group fed the basic diet containing high-dosage nattokinase (2.6 mg/g diet) showed significant reductions in systolic blood pressure (SBP), diastolic blood pressure (DBP) and plasma fibrinogen level, compared with control group and no influence on activities of renin and angiotensin-converting enzyme (ACE, EC 3.4.15.1), and plasma angiotensin II level in the renin-angiotensin system. The treatment of the basic diet containing high-dosage fragments (0.6 mg/g diet) significantly decreased SBP, DBP and plasma angiotensin II level in plasma but the treatment did not influence on plasma fibrinogen level. These results suggest that nattokinase and its fragments are different from each other in the mechanism to reduce hypertension. Nattokinase, retained its protease activity after absorbance across the intestines, may decrease blood pressure through cleavage of fibrinogen in plasma. The fragments, which absorbed as nattokinase-degradation products, prevents the elevation of plasma angiotensin II level to suppress hypertension.

Missing Fragments: Detecting Cooperative Binding in Fragment-Based Drug Design

Science.gov (United States)

2012-01-01

The aim of fragment-based drug design (FBDD) is to identify molecular fragments that bind to alternate subsites within a given binding pocket leading to cooperative binding when linked. In this study, the binding of fragments to human phenylethanolamine N-methyltransferase is used to illustrate how (a) current protocols may fail to detect fragments that bind cooperatively, (b) theoretical approaches can be used to validate potential hits, and (c) apparent false positives obtained when screening against cocktails of fragments may in fact indicate promising leads. PMID:24900472

Protection, Profit, or Privacy: Exploring Strategic Solutions for Integrating Unmanned Aerial Systems (UAS) and the Delicate Balance Between Commercial Opportunity and Public Safety

Science.gov (United States)

2016-12-01

prosperity for small business, while continuing to actively pursue and attract large-scale events to the city to boost its tourism industry. It will remain...to enact laws and ordinances prohibiting the use of UAS over large crowds or sporting venues. Recent examples across the country have continued to...surface illustrating the very nature of the dangers associated with UAS platforms deployed over large crowds or sporting events. For instance, in

A Gateway MultiSite recombination cloning toolkit.

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Lena K Petersen

Full Text Available The generation of DNA constructs is often a rate-limiting step in conducting biological experiments. Recombination cloning of single DNA fragments using the Gateway system provided an advance over traditional restriction enzyme cloning due to increases in efficiency and reliability. Here we introduce a series of entry clones and a destination vector for use in two, three, and four fragment Gateway MultiSite recombination cloning whose advantages include increased flexibility and versatility. In contrast to Gateway single-fragment cloning approaches where variations are typically incorporated into model system-specific destination vectors, our Gateway MultiSite cloning strategy incorporates variations in easily generated entry clones that are model system-independent. In particular, we present entry clones containing insertions of GAL4, QF, UAS, QUAS, eGFP, and mCherry, among others, and demonstrate their in vivo functionality in Drosophila by using them to generate expression clones including GAL4 and QF drivers for various trp ion channel family members, UAS and QUAS excitatory and inhibitory light-gated ion channels, and QUAS red and green fluorescent synaptic vesicle markers. We thus establish a starter toolkit of modular Gateway MultiSite entry clones potentially adaptable to any model system. An inventory of entry clones and destination vectors for Gateway MultiSite cloning has also been established (www.gatewaymultisite.org.

Release and characteristics of fungal fragments in various conditions

Energy Technology Data Exchange (ETDEWEB)

Mensah-Attipoe, Jacob [Department of Environmental Science, University of Eastern Finland, Yliopistonranta 1D, P. O. Box 1627, FI-70211 Kuopio (Finland); Saari, Sampo [Department of Physics, Tampere University of Technology, Korkeakoulunkatu 3, 33720 Tampere (Finland); Veijalainen, Anna-Maria; Pasanen, Pertti [Department of Environmental Science, University of Eastern Finland, Yliopistonranta 1D, P. O. Box 1627, FI-70211 Kuopio (Finland); Keskinen, Jorma [Department of Physics, Tampere University of Technology, Korkeakoulunkatu 3, 33720 Tampere (Finland); Leskinen, Jari T.T. [SIB Labs, University of Eastern Finland, Yliopistonranta 1E, P. O. Box 1627, FI-70211, Kuopio (Finland); Reponen, Tiina, E-mail: reponeta@ucmail.uc.edu [Department of Environmental Science, University of Eastern Finland, Yliopistonranta 1D, P. O. Box 1627, FI-70211 Kuopio (Finland); Department of Environmental Health, University of Cincinnati, P.O. Box 670056, Cincinnati, OH 45267-0056 (United States)

2016-03-15

Intact spores and submicrometer size fragments are released from moldy building materials during growth and sporulation. It is unclear whether all fragments originate from fungal growth or if small pieces of building materials are also aerosolized as a result of microbial decomposition. In addition, particles may be formed through nucleation from secondary metabolites of fungi, such as microbial volatile organic compounds (MVOCs). In this study, we used the elemental composition of particles to characterize the origin of submicrometer fragments released from materials contaminated by fungi. Particles from three fungal species (Aspergillus versicolor, Cladosporium cladosporioides and Penicillium brevicompactum), grown on agar, wood and gypsum board were aerosolized using the Fungal Spore Source Strength Tester (FSSST) at three air velocities (5, 16 and 27 m/s). Released spores (optical size, d{sub p} ≥ 0.8 μm) and fragments (d{sub p} ≤ 0.8 μm) were counted using direct-reading optical aerosol instruments. Particles were also collected on filters, and their morphology and elemental composition analyzed using scanning electron microscopes (SEMs) coupled with an Energy-Dispersive X-ray spectroscopy (EDX). Among the studied factors, air velocity resulted in the most consistent trends in the release of fungal particles. Total concentrations of both fragments and spores increased with an increase in air velocity for all species whereas fragment–spore (F/S) ratios decreased. EDX analysis showed common elements, such as C, O, Mg and Ca, for blank material samples and fungal growth. However, N and P were exclusive to the fungal growth, and therefore were used to differentiate biological fragments from non-biological ones. Our results indicated that majority of fragments contained N and P. Because we observed increased release of fragments with increased air velocities, nucleation of MVOCs was likely not a relevant process in the formation of fungal fragments. Based

The effects of landscape fragmentation on pollination dynamics: absence of evidence not evidence of absence.

Science.gov (United States)

Hadley, Adam S; Betts, Matthew G

2012-08-01

Animal-mediated pollination is essential for both ecosystem services and conservation of global biodiversity, but a growing body of work reveals that it is negatively affected by anthropogenic disturbance. Landscape-scale disturbance results in two often inter-related processes: (1) habitat loss, (2) disruptions of habitat configuration (i.e. fragmentation). Understanding the relative effects of such processes is critical in designing effective management strategies to limit pollination and pollinator decline. We reviewed existing published work from 1989 to 2009 and found that only six of 303 studies considering the influence of landscape context on pollination separated the effects of habitat loss from fragmentation. We provide a synthesis of the current landscape, behavioural, and pollination ecology literature in order to present preliminary multiple working hypotheses explaining how these two landscape processes might independently influence pollination dynamics. Landscape disturbance primarily influences three components of pollination interactions: pollinator density, movement, and plant demography. We argue that effects of habitat loss on each of these components are likely to differ substantially from the effects of fragmentation, which is likely to be more complex and may influence each pollination component in contrasting ways. The interdependency between plants and animals inherent to pollination systems also has the possibility to drive cumulative effects of fragmentation, initiating negative feedback loops between animals and the plants they pollinate. Alternatively, due to their asymmetrical structure, pollination networks may be relatively robust to fragmentation. Despite the potential importance of independent effects of habitat fragmentation, its effects on pollination remain largely untested. We postulate that variation across studies in the effects of 'fragmentation' owes much to artifacts of the sampling regimes adopted, particularly (1

Bridging the provenance gap: opportunities and challenges tracking in and ex silico provenance in sUAS workflows

Science.gov (United States)

Thomer, A.

2017-12-01

Data provenance - the record of the varied processes that went into the creation of a dataset, as well as the relationships between resulting data objects - is necessary to support the reusability, reproducibility and reliability of earth science data. In sUAS-based research, capturing provenance can be particularly challenging because of the breadth and distributed nature of the many platforms used to collect, process and analyze data. In any given project, multiple drones, controllers, computers, software systems, sensors, cameras, imaging processing algorithms and data processing workflows are used over sometimes long periods of time. These platforms and processing result in dozens - if not hundreds - of data products in varying stages of readiness-for-analysis and sharing. Provenance tracking mechanisms are needed to make the relationships between these many data products explicit, and therefore more reusable and shareable. In this talk, I discuss opportunities and challenges in tracking provenance in sUAS-based research, and identify gaps in current workflow-capture technologies. I draw on prior work conducted as part of the IMLS-funded Site-Based Data Curation project in which we developed methods of documenting in and ex silico (that is, computational and non-computation) workflows, and demonstrate this approaches applicability to research with sUASes. I conclude with a discussion of ontologies and other semantic technologies that have potential application in sUAS research.

Electron identification for transverse momentum above 10 GeV/c in UA2' at the proton-antiproton collider at CERN

International Nuclear Information System (INIS)

Meyer, J.P.

1989-11-01

The CERN decision to increase the luminosity of the proton-antiproton collider (ACOL) at 630 GeV in the center of mass by about one order of magnitude, has motivated the upgrade of the UA2 detector in order to search for the top quark. The main improvement of the detector consists in a better electron identification and an increase of the hadronic calorimeter coverage. The upgraded central detector uses new techniques to identify electrons, in particular a scintillating fiber detector (SFD). This detector of cylindrical geometry have been built at the CEN Saclay (DPhPE) using ∼ 60,000 fibers arranged in 24 layers. It measures tracks (6 points in space) as well as the position of electromagnetic preshowers. It rejects fake electrons, simulated by the spacial overlap of a π o and a hadron, with the help of a precise measurement of the distance between track and preshower. Using data from a small integrated luminosity 46 nb -1 achieved on 1987, we have studied the UA2 electron identification improvement. Comparing the electron transverse momentum spectra observed both in the old and the new detector we have found that the electron identification of the new UA2 apparatus has improved by an order of magnitude. The expected increase of the luminosity for the coming runs and the good knowledge of the UA2 apparatus will make it possible to improve tests of the standard model and in particular to achieve a better sensitivity for the top quark search [fr

Analyzing Internal Fragmentation of Electrosprayed Ubiquitin Ions During Beam-Type Collisional Dissociation

Science.gov (United States)

Durbin, Kenneth R.; Skinner, Owen S.; Fellers, Ryan T.; Kelleher, Neil L.

2015-05-01

Gaseous fragmentation of intact proteins is multifaceted and can be unpredictable by current theories in the field. Contributing to the complexity is the multitude of precursor ion states and fragmentation channels. Terminal fragment ions can be re-fragmented, yielding product ions containing neither terminus, termed internal fragment ions. In an effort to better understand and capitalize upon this fragmentation process, we collisionally dissociated the high (13+), middle (10+), and low (7+) charge states of electrosprayed ubiquitin ions. Both terminal and internal fragmentation processes were quantified through step-wise increases of voltage potential in the collision cell. An isotope fitting algorithm matched observed product ions to theoretical terminal and internal fragment ions. At optimal energies for internal fragmentation of the 10+, nearly 200 internal fragments were observed; on average each of the 76 residues in ubiquitin was covered by 24.1 internal fragments. A pertinent finding was that formation of internal ions occurs at similar energy thresholds as terminal b- and y-ion types in beam-type activation. This large amount of internal fragmentation is frequently overlooked during top-down mass spectrometry. As such, we present several new approaches to visualize internal fragments through modified graphical fragment maps. With the presented advances of internal fragment ion accounting and visualization, the total percentage of matched fragment ions increased from approximately 40% to over 75% in a typical beam-type MS/MS spectrum. These sequence coverage improvements offer greater characterization potential for whole proteins with no needed experimental changes and could be of large benefit for future high-throughput intact protein analysis.

Small UAS Detect and Avoid Requirements Necessary for Limited Beyond Visual Line of Sight (BVLOS) Operations

Science.gov (United States)

2017-05-19

Potential sUAS BVLOS operational scenarios/use cases and DAA approaches were collected through a number of industry wide data calls. Every 333 Exemption holder was solicited for this same information. Summary information from more than 5,000 exemptio...

γ1-Containing GABA-A Receptors Cluster at Synapses Where they Mediate Slower Synaptic Currents than γ2-Containing GABA-A Receptors

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Christine L. Dixon

2017-06-01

Full Text Available GABA-A receptors (GABAARs are pentameric ligand-gated ion channels that are assembled mainly from α (α1–6, β (β1–3 and γ (γ1–3 subunits. Although GABAARs containing γ2L subunits mediate most of the inhibitory neurotransmission in the brain, significant expression of γ1 subunits is seen in the amygdala, pallidum and substantia nigra. However, the location and function of γ1-containing GABAARs in these regions remains unclear. In “artificial” synapses, where the subunit composition of postsynaptic receptors is specifically controlled, γ1 incorporation slows the synaptic current decay rate without affecting channel deactivation, suggesting that γ1-containing receptors are not clustered and therefore activated by diffuse neurotransmitter. However, we show that γ1-containing receptors are localized at neuronal synapses and form clusters in both synaptic and extrasynaptic regions. In addition, they exhibit rapid membrane diffusion and a higher frequency of exchange between synaptic and perisynaptic populations compared to γ2L-containing GABAARs. A point mutation in the large intracellular domain and a pharmacological analysis reveal that when a single non-conserved γ2L residue is mutated to its γ1 counterpart (T349L, the synaptic current decay is slowed from γ2L- to γ1-like without changing the clustering or diffusion properties of the receptors. In addition, previous fast perfusion and single channel kinetic experiments revealed no difference in the intrinsic closing rates of γ2L- and γ1-containing receptors when expressed in HEK293 cells. These observations together with Monte Carlo simulations of synaptic function confirm that decreased clustering does not control γ1-containing GABAAR kinetics. Rather, they suggest that γ1- and γ2L-containing receptors exhibit differential synaptic current decay rates due to differential gating dynamics when localized at the synapse.

UAS stealth: target pursuit at constant distance using a bio-inspired motion camouflage guidance law.

Science.gov (United States)

Strydom, Reuben; Srinivasan, Mandyam V

2017-09-21

The aim of this study is to derive a guidance law by which an unmanned aerial system(s) (UAS) can pursue a moving target at a constant distance, while concealing its own motion. We derive a closed-form solution for the trajectory of the UAS by imposing two key constraints: (1) the shadower moves in such a way as to be perceived as a stationary object by the shadowee, and (2) the distance between the shadower and shadowee is kept constant. Additionally, the theory presented in this paper considers constraints on the maximum achievable speed and acceleration of the shadower. Our theory is tested through Matlab simulations, which validate the camouflage strategy for both 2D and 3D conditions. Furthermore, experiments using a realistic vision-based implementation are conducted in a virtual environment, where the results demonstrate that even with noisy state information it is possible to remain well camouflaged using the constant distance motion camouflage technique.

Low-melanin containing pullulan production from sugarcane bagasse hydrolysate by Aureobasidium pullulans in fermentations assisted by light-emitting diode.

Science.gov (United States)

Terán Hilares, Ruly; Orsi, Camila Ayres; Ahmed, Muhammad Ajaz; Marcelino, Paulo Franco; Menegatti, Carlos Renato; da Silva, Silvio Silvério; Dos Santos, Júlio César

2017-04-01

Pullulan is a polymer produced by Aureobasidium pullulans and the main bottleneck for its industrial production is the presence of melanin pigment. In this study, light-emitting diodes (LEDs) of different wavelengths were used to assist the fermentation process aiming to produce low-melanin containing pullulan by wild strain of A. pullulans LB83 with different carbon sources. Under white light using glucose-based medium, 11.75g.L -1 of pullulan with high melanin content (45.70UA 540nm .g -1 ) was obtained, this production improved in process assisted by blue LED light, that resulted in 15.77g.L -1 of pullulan with reduced content of melanin (4.46UA 540nm .g -1 ). By using sugarcane bagasse (SCB) hydrolysate as carbon source, similar concentration of pullulan (about 20g.L -1 ) was achieved using white and blue LED lights, with lower melanin contents in last. Use of LED light was found as a promising approach to assist biotechnological process for low-melanin containing pullulan production. Copyright © 2017 Elsevier Ltd. All rights reserved.

Landslide Fissure Inference Assessment by ANFIS and Logistic Regression Using UAS-Based Photogrammetry

Directory of Open Access Journals (Sweden)

Ozgun Akcay

2015-10-01

Full Text Available Unmanned Aerial Systems (UAS are now capable of gathering high-resolution data, therefore, landslides can be explored in detail at larger scales. In this research, 132 aerial photographs were captured, and 85,456 features were detected and matched automatically using UAS photogrammetry. The root mean square (RMS values of the image coordinates of the Ground Control Points (GPCs varied from 0.521 to 2.293 pixels, whereas maximum RMS values of automatically matched features was calculated as 2.921 pixels. Using the 3D point cloud, which was acquired by aerial photogrammetry, the raster datasets of the aspect, slope, and maximally stable extremal regions (MSER detecting visual uniformity, were defined as three variables, in order to reason fissure structures on the landslide surface. In this research, an Adaptive Neuro Fuzzy Inference System (ANFIS and a Logistic Regression (LR were implemented using training datasets to infer fissure data appropriately. The accuracy of the predictive models was evaluated by drawing receiver operating characteristic (ROC curves and by calculating the area under the ROC curve (AUC. The experiments exposed that high-resolution imagery is an indispensable data source to model and validate landslide fissures appropriately.

Unmanned Aircraft Systems (UAS) Integration in the National Airspace System (NAS) Project FY16 Annual Review

Science.gov (United States)

Grindle, Laurie; Hackenberg, Davis

2016-01-01

This presentation gives insight into the research activities and efforts being executed in order to integrate unmanned aircraft systems into the national airspace system. This briefing is to inform others of the UAS-NAS FY16 progress and future directions.

Structures of endothiapepsin-fragment complexes from crystallographic fragment screening using a novel, diverse and affordable 96-compound fragment library.

Science.gov (United States)

Huschmann, Franziska U; Linnik, Janina; Sparta, Karine; Ühlein, Monika; Wang, Xiaojie; Metz, Alexander; Schiebel, Johannes; Heine, Andreas; Klebe, Gerhard; Weiss, Manfred S; Mueller, Uwe

2016-05-01

Crystallographic screening of the binding of small organic compounds (termed fragments) to proteins is increasingly important for medicinal chemistry-oriented drug discovery. To enable such experiments in a widespread manner, an affordable 96-compound library has been assembled for fragment screening in both academia and industry. The library is selected from already existing protein-ligand structures and is characterized by a broad ligand diversity, including buffer ingredients, carbohydrates, nucleotides, amino acids, peptide-like fragments and various drug-like organic compounds. When applied to the model protease endothiapepsin in a crystallographic screening experiment, a hit rate of nearly 10% was obtained. In comparison to other fragment libraries and considering that no pre-screening was performed, this hit rate is remarkably high. This demonstrates the general suitability of the selected compounds for an initial fragment-screening campaign. The library composition, experimental considerations and time requirements for a complete crystallographic fragment-screening campaign are discussed as well as the nine fully refined obtained endothiapepsin-fragment structures. While most of the fragments bind close to the catalytic centre of endothiapepsin in poses that have been observed previously, two fragments address new sites on the protein surface. ITC measurements show that the fragments bind to endothiapepsin with millimolar affinity.

Structures of endothiapepsin–fragment complexes from crystallographic fragment screening using a novel, diverse and affordable 96-compound fragment library

Science.gov (United States)

Huschmann, Franziska U.; Linnik, Janina; Sparta, Karine; Ühlein, Monika; Wang, Xiaojie; Metz, Alexander; Schiebel, Johannes; Heine, Andreas; Klebe, Gerhard; Weiss, Manfred S.; Mueller, Uwe

2016-01-01

Crystallographic screening of the binding of small organic compounds (termed fragments) to proteins is increasingly important for medicinal chemistry-oriented drug discovery. To enable such experiments in a widespread manner, an affordable 96-compound library has been assembled for fragment screening in both academia and industry. The library is selected from already existing protein–ligand structures and is characterized by a broad ligand diversity, including buffer ingredients, carbohydrates, nucleotides, amino acids, peptide-like fragments and various drug-like organic compounds. When applied to the model protease endothiapepsin in a crystallographic screening experiment, a hit rate of nearly 10% was obtained. In comparison to other fragment libraries and considering that no pre-screening was performed, this hit rate is remarkably high. This demonstrates the general suitability of the selected compounds for an initial fragment-screening campaign. The library composition, experimental considerations and time requirements for a complete crystallographic fragment-screening campaign are discussed as well as the nine fully refined obtained endothiapepsin–fragment structures. While most of the fragments bind close to the catalytic centre of endothiapepsin in poses that have been observed previously, two fragments address new sites on the protein surface. ITC measurements show that the fragments bind to endothiapepsin with millimolar affinity. PMID:27139825

Extracellular matrix fragmentation in young, healthy cartilaginous tissues

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RJ Craddock

2018-02-01

Full Text Available Although the composition and structure of cartilaginous tissues is complex, collagen II fibrils and aggrecan are the most abundant assemblies in both articular cartilage (AC and the nucleus pulposus (NP of the intervertebral disc (IVD. Whilst structural heterogeneity of intact aggrecan ( containing three globular domains is well characterised, the extent of aggrecan fragmentation in healthy tissues is poorly defined. Using young, yet skeletally mature (18-30 months, bovine AC and NP tissues, it was shown that, whilst the ultrastructure of intact aggrecan was tissue-dependent, most molecules (AC: 95 %; NP: 99.5 % were fragmented (lacking one or more globular domains. Fragments were significantly smaller and more structurally heterogeneous in the NP compared with the AC (molecular area; AC: 8543 nm2; NP: 4625 nm2; p < 0.0001. In contrast, fibrillar collagen appeared structurally intact and tissue-invariant. Molecular fragmentation is considered indicative of a pathology; however, these young, skeletally mature tissues were histologically and mechanically (reduced modulus: AC: ≈ 500 kPa; NP: ≈ 80 kPa comparable to healthy tissues and devoid of notable gelatinase activity (compared with rat dermis. As aggrecan fragmentation was prevalent in neonatal bovine AC (99.5 % fragmented, molecular area: 5137 nm2 as compared with mature AC (95.0 % fragmented, molecular area: 8667 nm2, it was hypothesised that targeted proteolysis might be an adaptive process that modified aggrecan packing (as simulated computationally and, hence, tissue charge density, mechanical properties and porosity. These observations provided a baseline against which pathological and/or age-related fragmentation of aggrecan could be assessed and suggested that new strategies might be required to engineer constructs that mimic the mechanical properties of native cartilaginous tissues.

The bit slice micro-processor 'GESPRO' as a project in the UA2 experiment

CERN Document Server

Becam, C; Delanghe, J; Fest, H M; Lecoq, J; Martin, H; Mencik, M; MerkeI, B; Meyer, J M; Perrin, M; Plothow, H; Rampazzo, J P; Schittly, A

1981-01-01

The bit slice micro-processor GESPRO is a CAMAC module plugged into a standard Elliot system crate via which it communicates as a slave with its host computer. It has full control of CAMAC as a master unit. GESPRO is a 24 bit machine with multi-mode memory addressing capacity of 64K words. The micro-processor structure uses 5 buses including pipe-line registers to mask access time and 16 interrupt levels. The micro-program memory capacity is 2K (RAM) words of 48 bits each. A special hardwired module allows floating point, as well as integer, multiplication of 24*24 bits, result in 48 bits, in about 200 ns. This micro-processor could be used in the UA2 data acquisition chain and trigger system for the following tasks: (a) online data reduction, i.e. to read DURANDAL, process the information resulting in accepting or rejecting the event; (b) readout and analysis of the accepted data; (c) preprocess the data. The UA2 version of GESPRO is under construction, programs and micro-programs are under development. Hard...

HYPERSPECTRAL REMOTE SENSING WITH THE UAS "STUTTGARTER ADLER" – CHALLENGES, EXPERIENCES AND FIRST RESULTS

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A. Buettner

2013-08-01

Full Text Available The UAS "Stuttgarter Adler" was designed as a flexible and cost-effective remote-sensing platform for acquisition of high quality environmental data. Different missions for precision agriculture applications and BRDF-research have been successfully performed with a multispectral camera system and a spectrometer as main payloads. Currently, an imaging spectrometer is integrated in the UAS as a new payload, which enables the recording of hyperspectral data in more than 200 spectral bands in the visible and near infrared spectrum. The recording principle of the hyperspectral instrument is based on a line scanner. Each line is stored as a matrix image with spectral information in one axis and spatial information in the other axis of the image. Besides a detailed specification of the system concept and instrument design, the calibration procedure of the hyperspectral sensor system is discussed and results of the laboratory calibration are presented. The complete processing chain of measurement data is described and first results of measurement-flights over agricultural test sites are presented.

The UA1 upgrade calorimeter trigger processor

International Nuclear Information System (INIS)

Bains, N.; Baird, S.A.; Biddulph, P.

1990-01-01

The increased luminosity of the improved CERN Collider and the more subtle signals of second-generation collider physics demand increasingly sophisticated triggering. We have built a new first-level trigger processor designed to use the excellent granularity of the UA1 upgrade calorimeter. This device is entirely digital and handles events in 1.5 μs, thus introducing no deadtime. Its most novel feature is fast two-dimensional electromagnetic cluster-finding with the possibility of demanding an isolated shower of limited penetration. The processor allows multiple combinations of triggers on electromagnetic showers, hadronic jets and energy sums, including a total-energy veto of multiple interactions and a full vector sum of missing transverse energy. This hard-wired processor is about five times more powerful than its predecessor, and makes extensive use of pipelining techniques. It was used extensively in the 1988 and 1989 runs of the CERN Collider. (author)

The UA1 upgrade calorimeter trigger processor

International Nuclear Information System (INIS)

Bains, M.; Charleton, D.; Ellis, N.; Garvey, J.; Gregory, J.; Jimack, M.P.; Jovanovic, P.; Kenyon, I.R.; Baird, S.A.; Campbell, D.; Cawthraw, M.; Coughlan, J.; Flynn, P.; Galagedera, S.; Grayer, G.; Halsall, R.; Shah, T.P.; Stephens, R.; Biddulph, P.; Eisenhandler, E.; Fensome, I.F.; Landon, M.; Robinson, D.; Oliver, J.; Sumorok, K.

1990-01-01

The increased luminosity of the improved CERN Collider and the more subtle signals of second-generation collider physics demand increasingly sophisticated triggering. We have built a new first-level trigger processor designed to use the excellent granularity of the UA1 upgrade calorimeter. This device is entirely digital and handles events in 1.5 μs, thus introducing no dead time. Its most novel feature is fast two-dimensional electromagnetic cluster-finding with the possibility of demanding an isolated shower of limited penetration. The processor allows multiple combinations of triggers on electromagnetic showers, hadronic jets and energy sums, including a total-energy veto of multiple interactions and a full vector sum of missing transverse energy. This hard-wired processor is about five times more powerful than its predecessor, and makes extensive use of pipelining techniques. It was used extensively in the 1988 and 1989 runs of the CERN Collider. (orig.)

Metagenome Fragment Classification Using -Mer Frequency Profiles

Directory of Open Access Journals (Sweden)

Gail Rosen

2008-01-01

Full Text Available A vast amount of microbial sequencing data is being generated through large-scale projects in ecology, agriculture, and human health. Efficient high-throughput methods are needed to analyze the mass amounts of metagenomic data, all DNA present in an environmental sample. A major obstacle in metagenomics is the inability to obtain accuracy using technology that yields short reads. We construct the unique -mer frequency profiles of 635 microbial genomes publicly available as of February 2008. These profiles are used to train a naive Bayes classifier (NBC that can be used to identify the genome of any fragment. We show that our method is comparable to BLAST for small 25 bp fragments but does not have the ambiguity of BLAST's tied top scores. We demonstrate that this approach is scalable to identify any fragment from hundreds of genomes. It also performs quite well at the strain, species, and genera levels and achieves strain resolution despite classifying ubiquitous genomic fragments (gene and nongene regions. Cross-validation analysis demonstrates that species-accuracy achieves 90% for highly-represented species containing an average of 8 strains. We demonstrate that such a tool can be used on the Sargasso Sea dataset, and our analysis shows that NBC can be further enhanced.

Towards a population synthesis model of self-gravitating disc fragmentation and tidal downsizing II: the effect of fragment-fragment interactions

Science.gov (United States)

Forgan, D. H.; Hall, C.; Meru, F.; Rice, W. K. M.

2018-03-01

It is likely that most protostellar systems undergo a brief phase where the protostellar disc is self-gravitating. If these discs are prone to fragmentation, then they are able to rapidly form objects that are initially of several Jupiter masses and larger. The fate of these disc fragments (and the fate of planetary bodies formed afterwards via core accretion) depends sensitively not only on the fragment's interaction with the disc, but also with its neighbouring fragments. We return to and revise our population synthesis model of self-gravitating disc fragmentation and tidal downsizing. Amongst other improvements, the model now directly incorporates fragment-fragment interactions while the disc is still present. We find that fragment-fragment scattering dominates the orbital evolution, even when we enforce rapid migration and inefficient gap formation. Compared to our previous model, we see a small increase in the number of terrestrial-type objects being formed, although their survival under tidal evolution is at best unclear. We also see evidence for disrupted fragments with evolved grain populations - this is circumstantial evidence for the formation of planetesimal belts, a phenomenon not seen in runs where fragment-fragment interactions are ignored. In spite of intense dynamical evolution, our population is dominated by massive giant planets and brown dwarfs at large semimajor axis, which direct imaging surveys should, but only rarely, detect. Finally, disc fragmentation is shown to be an efficient manufacturer of free-floating planetary mass objects, and the typical multiplicity of systems formed via gravitational instability will be low.

Mission Adaptive UAS Platform for Earth Science Resource Assessment

Science.gov (United States)

Dunagan, S.; Fladeland, M.; Ippolito, C.; Knudson, M.

2015-01-01

NASA Ames Research Center has led a number of important Earth science remote sensing missions including several directed at the assessment of natural resources. A key asset for accessing high risk airspace has been the 180 kg class SIERRA UAS platform, providing mission durations of up to 8 hrs at altitudes up to 3 km. Recent improvements to this mission capability are embodied in the incipient SIERRA-B variant. Two resource mapping problems having unusual mission characteristics requiring a mission adaptive capability are explored here. One example involves the requirement for careful control over solar angle geometry for passive reflectance measurements. This challenges the management of resources in the coastal ocean where solar angle combines with sea state to produce surface glint that can obscure the ocean color signal. Furthermore, as for all scanning imager applications, the primary flight control priority to fly the UAS directly to the next waypoint should compromise with the requirement to minimize roll and crab effects in the imagery. A second example involves the mapping of natural resources in the Earth's crust using precision magnetometry. In this case the vehicle flight path must be oriented to optimize magnetic flux gradients over a spatial domain having continually emerging features, while optimizing the efficiency of the spatial mapping task. These requirements were highlighted in several recent Earth Science missions including the October 2013 OCEANIA mission directed at improving the capability for hyperspectral reflectance measurements in the coastal ocean, and the Surprise Valley Mission directed at mapping sub-surface mineral composition and faults, using high-sensitivity magentometry. This paper reports the development of specific aircraft control approaches to incorporate the unusual and demanding requirements to manage solar angle, aircraft attitude and flight path orientation, and efficient (directly geo-rectified) surface and sub

A Compact, Wide Area Surveillance 3D Imaging LIDAR Providing UAS Sense and Avoid Capabilities, Phase II

Data.gov (United States)

National Aeronautics and Space Administration — The Phase II effort will complete the design of a flight prototype of an eye safe 3D LIDAR which, when deployed on Unmanned Ariel Systems (UAS), will detect aircraft...

Inhibition of Streptococcus mutans biofilm formation on composite resins containing ursolic acid

Science.gov (United States)

Kim, Soohyeon; Song, Minju; Roh, Byoung-Duck; Park, Sung-Ho

2013-01-01

Objectives To evaluate the inhibitory effect of ursolic acid (UA)-containing composites on Streptococcus mutans (S. mutans) biofilm. Materials and Methods Composite resins with five different concentrations (0.04, 0.1, 0.2, 0.5, and 1.0 wt%) of UA (U6753, Sigma Aldrich) were prepared, and their flexural strengths were measured according to ISO 4049. To evaluate the effect of carbohydrate source on biofilm formation, either glucose or sucrose was used as a nutrient source, and to investigate the effect of saliva treatment, the specimen were treated with either unstimulated whole saliva or phosphate-buffered saline (PBS). For biofilm assay, composite disks were transferred to S. mutans suspension and incubated for 24 hr. Afterwards, the specimens were rinsed with PBS and sonicated. The colony forming units (CFU) of the disrupted biofilm cultures were enumerated. For growth inhibition test, the composites were placed on a polystyrene well cluster, and S. mutans suspension was inoculated. The optical density at 600 nm (OD600) was recorded by Infinite F200 pro apparatus (TECAN). One-way ANOVA and two-way ANOVA followed by Bonferroni correction were used for the data analyses. Results The flexural strength values did not show significant difference at any concentration (p > 0.01). In biofilm assay, the CFU score decreased as the concentration of UA increased. The influence of saliva pretreatment was conflicting. The sucrose groups exhibited higher CFU score than glucose group (p composite showed inhibitory effect on S. mutans biofilm formation and growth. PMID:23741708

A Compact L-band Radiometer for High Resolution sUAS-based Imaging of Soil Moisture and Surface Salinity Variations

Science.gov (United States)

Gasiewski, A. J.; Stachura, M.; Dai, E.; Elston, J.; McIntyre, E.; Leuski, V.

2014-12-01

Due to the long electrical wavelengths required along with practical aperture size limitations the scaling of passive microwave remote sensing of soil moisture and salinity from spaceborne low-resolution (~10-100 km) applications to high resolution (~10-1000 m) applications requires use of low flying aerial vehicles. This presentation summarizes the status of a project to develop a commercial small Unmanned Aerial System (sUAS) hosting a microwave radiometer for mapping of soil moisture in precision agriculture and sea surface salinity studies. The project is based on the Tempest electric-powered UAS and a compact L-band (1400-1427 MHz) radiometer developed specifically for extremely small and lightweight aerial platforms or man-portable, tractor, or tower-based applications. Notable in this combination are a highly integrated sUAS/radiometer antenna design and use of both the upwelling emitted signal from the surface and downwelling cold space signal for precise calibration using a unique lobe-differencing correlating radiometer architecture. The system achieves a spatial resolution comparable to the altitude of the UAS above the surface while referencing upwelling measurements to the constant and well-known background temperature of cold space. The radiometer has been tested using analog correlation detection, although future builds will include infrared, near-infrared, and visible (red) sensors for surface temperature and vegetation biomass correction and digital sampling for radio frequency interference mitigation. This NASA-sponsored project is being developed for commercial application in cropland water management (for example, high-value shallow root-zone crops), landslide risk assessment, NASA SMAP satellite validation, and NASA Aquarius salinity stratification studies. The system will ultimately be capable of observing salinity events caused by coastal glacier and estuary fresh water outflow plumes and open ocean rainfall events.

Fragment screening of cyclin G-associated kinase by weak affinity chromatography.

Science.gov (United States)

Meiby, Elinor; Knapp, Stefan; Elkins, Jonathan M; Ohlson, Sten

2012-11-01

Fragment-based drug discovery (FBDD) has become a new strategy for drug discovery where lead compounds are evolved from small molecules. These fragments form low affinity interactions (dissociation constant (K(D)) = mM - μM) with protein targets, which require fragment screening methods of sufficient sensitivity. Weak affinity chromatography (WAC) is a promising new technology for fragment screening based on selective retention of fragments by a drug target. Kinases are a major pharmaceutical target, and FBDD has been successfully applied to several of these targets. In this work, we have demonstrated the potential to use WAC in combination with mass spectrometry (MS) detection for fragment screening of a kinase target-cyclin G-associated kinase (GAK). One hundred seventy fragments were selected for WAC screening by virtual screening of a commercial fragment library against the ATP-binding site of five different proteins. GAK protein was immobilized on a capillary HPLC column, and compound binding was characterized by frontal affinity chromatography. Compounds were screened in sets of 13 or 14, in combination with MS detection for enhanced throughput. Seventy-eight fragments (46 %) with K(D) < 200 μM were detected, including a few highly efficient GAK binders (K(D) of 2 μM; ligand efficiency = 0.51). Of special interest is that chiral screening by WAC may be possible, as two stereoisomeric fragments, which both contained one chiral center, demonstrated twin peaks. This ability, in combination with the robustness, sensitivity, and simplicity of WAC makes it a new method for fragment screening of considerable potential.

Universal elements of fragmentation

International Nuclear Information System (INIS)

Yanovsky, V. V.; Tur, A. V.; Kuklina, O. V.

2010-01-01

A fragmentation theory is proposed that explains the universal asymptotic behavior of the fragment-size distribution in the large-size range, based on simple physical principles. The basic principles of the theory are the total mass conservation in a fragmentation process and a balance condition for the energy expended in increasing the surface of fragments during their breakup. A flux-based approach is used that makes it possible to supplement the basic principles and develop a minimal theory of fragmentation. Such a supplementary principle is that of decreasing fragment-volume flux with increasing energy expended in fragmentation. It is shown that the behavior of the decreasing flux is directly related to the form of a power-law fragment-size distribution. The minimal theory is used to find universal asymptotic fragment-size distributions and to develop a natural physical classification of fragmentation models. A more general, nonlinear theory of strong fragmentation is also developed. It is demonstrated that solutions to a nonlinear kinetic equation consistent with both basic principles approach a universal asymptotic size distribution. Agreement between the predicted asymptotic fragment-size distributions and experimental observations is discussed.

A comparison of multicopter and fixed-wing unmanned aerial systems (UAS) applied to mapping debris flows in small alpine catchments

Science.gov (United States)

Sotier, Bernadette; Lechner, Veronika

2016-04-01

The use of unmanned aerial systems (UAS) for documenting natural hazard events (e.g. debris flows) is becoming increasingly popular, as UAS allow on-demand, flexible and cost-efficient data acquisition. In this paper, we present the results of a comparison of multicopter and fixed-wing UAS. They were employed in the summer of 2015 to map two small alpine catchments located in Western Austria, where debris flows had occurred recently: The first event took place in the Seigesbach (Tyrol), the second occurred in the Plojergraben (Salzburg). For the Seigesbach mission, a fixed-wing UAS (Multiplex Mentor), equipped with a Sony NEX5 (50 mm prime lens, 14 MP sensor resolution) was employed to acquire approximately 4,000 images. In the Plojergraben an AustroDrones X18 octocopter was used, carrying a Sony ILCE-7R (35 mm prime lens, 36 MP sensor resolution) to record 1,700 images. Both sites had a size of approximately 2km². 20 ground control points (GCP) were distributed within both catchments, and their location was measured (Trimble GeoXT, expected accuracy 0.15 m). Using standard structure-from-motion photogrammetry software (AgiSoft PhotoScan Pro, v. 1.1.6), orthophotos (5 cm ground sampling distance - GSD) and digital surface models (DSM) (20 cm GSD) were calculated. Volume differences caused by the debris flow (i.e. deposition heights and erosion depths) computed by subtracting post-event from pre-event DSMs. Even though the terrain conditions in the two catchments were comparable, the challenges during the field campaign and the evaluation of the aerial images were very different. The main difference between the two campaigns was the number of flights required to cover the catchment: only four were needed by the fixed-wing UAS, while the multicopter required eleven in the Plojergraben. The fixed-wing UAS is specially designed for missions in hardly accessible regions, requiring only two people to carry the whole equipment, while in this case a car was needed for the

Lightweight flywheel containment

Science.gov (United States)

Smith, James R.

2004-06-29

A lightweight flywheel containment composed of a combination of layers of various material which absorb the energy of a flywheel structural failure. The various layers of material act as a vacuum barrier, momentum spreader, energy absorber, and reaction plate. The flywheel containment structure has been experimentally demonstrated to contain carbon fiber fragments with a velocity of 1,000 m/s and has an aerial density of less than 6.5 g/square centimeters. The flywheel containment, may for example, be composed of an inner high toughness structural layer, and energy absorbing layer, and an outer support layer. Optionally, a layer of impedance matching material may be utilized intermediate the flywheel rotor and the inner high toughness layer.

Distribution of rock fragments and their effects on hillslope soil erosion in purple soil, China

Science.gov (United States)

Wang, Xiaoyan

2017-04-01

Purple soil is widely distributed in Sichuan Basin and Three Gorges Reservoir Area. Purple soil region is abundant in soil fertility and hydrothermal resources, playing an important role in the agricultural development of China. Soil erosion has long been recognized as a major environmental problem in the purple soil region where the population is large and slope farming is commonly practiced, and rainstorm is numerous. The existence of rock fragments is one of the most important characteristics of purple soil. Rock fragments at the soil surface or in the soil layer affect soil erosion processes by water in various direct and indirect ways, thus the erosion processes of soil containing rock fragments have unique features. Against the severe soil degradation by erosion of purple soil slope, carrying out the research about the characteristics of purple soil containing rock fragments and understanding the influence of rock fragments on soil erosion processes have important significance, which would promote the rational utilization of purple soil slope land resources and accurate prediction of purple soil loss. Therefore, the aims of this study were to investigate the distribution of rock fragments in purple soil slope and the impact of rock fragment content on soil physical properties and soil erosion. First, field sampling methods were used to survey the spatial variability of rock fragments in soil profiles and along slope and the physical properties of soils containing rock fragments. Secondly, indoor simulated rainfall experiments were used to exam the effect of rock fragments in the soil layer on soil erosion processes and the relationships between rainfall infiltration, change of surface flow velocity, surface runoff volume and sediment on one hand, and rock fragment content (Rv, 0% 30%, which was determined according the results of field investigation for rock fragment distribution) on the other were investigated. Thirdly, systematic analysis about the

Structural investigation of an extracellular polysaccharide produced by the cariogenic bacterium Streptococcus mutans strain UA159

NARCIS (Netherlands)

Li, Bo; Dobruchowska, Justyna M.; Hoogenkamp, Michel A.; Gerwig, Gerrit J.

2012-01-01

The structure of an extracellular polysaccharide EPS159 produced from sucrose by Streptococcus mutans UA159 was investigated through the main oligosaccharides obtained from partial acid hydrolysis, monosaccharide/methylation analysis, and 1D/2D H-1 NMR spectroscopy. The results showed that EPS159

Linkage map of the fragments of herpesvirus papio DNA.

Science.gov (United States)

Lee, Y S; Tanaka, A; Lau, R Y; Nonoyama, M; Rabin, H

1981-01-01

Herpesvirus papio (HVP), an Epstein-Barr-like virus, causes lymphoblastoid disease in baboons. The physical map of HVP DNA was constructed for the fragments produced by cleavage of HVP DNA with restriction endonucleases EcoRI, HindIII, SalI, and PvuI, which produced 12, 12, 10, and 4 fragments, respectively. The total molecular size of HVP DNA was calculated as close to 110 megadaltons. The following methods were used for construction of the map; (i) fragments near the ends of HVP DNA were identified by treating viral DNA with lambda exonuclease before restriction enzyme digestion; (ii) fragments containing nucleotide sequences in common with fragments from the second enzyme digest of HVP DNA were examined by Southern blot hybridization; and (iii) the location of some fragments was determined by isolating individual fragments from agarose gels and redigesting the isolated fragments with a second restriction enzyme. Terminal heterogeneity and internal repeats were found to be unique features of HVP DNA molecule. One to five repeats of 0.8 megadaltons were found at both terminal ends. Although the repeats of both ends shared a certain degree of homology, it was not determined whether they were identical repeats. The internal repeat sequence of HVP DNA was found in the EcoRI-C region, which extended from 8.4 to 23 megadaltons from the left end of the molecule. The average number of the repeats was calculated to be seven, and the molecular size was determined to be 1.8 megadaltons. Similar unique features have been reported in EBV DNA (D. Given and E. Kieff, J. Virol. 28:524-542, 1978). Images PMID:6261015

FragKB: structural and literature annotation resource of conserved peptide fragments and residues.

Directory of Open Access Journals (Sweden)

Ashish V Tendulkar

Full Text Available BACKGROUND: FragKB (Fragment Knowledgebase is a repository of clusters of structurally similar fragments from proteins. Fragments are annotated with information at the level of sequence, structure and function, integrating biological descriptions derived from multiple existing resources and text mining. METHODOLOGY: FragKB contains approximately 400,000 conserved fragments from 4,800 representative proteins from PDB. Literature annotations are extracted from more than 1,700 articles and are available for over 12,000 fragments. The underlying systematic annotation workflow of FragKB ensures efficient update and maintenance of this database. The information in FragKB can be accessed through a web interface that facilitates sequence and structural visualization of fragments together with known literature information on the consequences of specific residue mutations and functional annotations of proteins and fragment clusters. FragKB is accessible online at http://ubio.bioinfo.cnio.es/biotools/fragkb/. SIGNIFICANCE: The information presented in FragKB can be used for modeling protein structures, for designing novel proteins and for functional characterization of related fragments. The current release is focused on functional characterization of proteins through inspection of conservation of the fragments.

The TIR-domain containing adaptor TRAM is required for TLR7 mediated RANTES production.

Directory of Open Access Journals (Sweden)

Enda Shevlin

Full Text Available Toll-like receptor 7 (TLR7 plays a vital role in the immune response to ssRNA viruses such as human rhinovirus (HRV and Influenza, against which there are currently no treatments or vaccines with long term efficacy available. Clearly, a more comprehensive understanding of the TLR7 signaling axis will contribute to its molecular targeting. TRIF related adaptor molecule (TRAM plays a vital role in TLR4 signaling by recruiting TRIF to TLR4, followed by endosomal trafficking of the complex and initiation of IRF3 dependent type I interferon production as well as NF-κB dependent pro-inflammatory cytokine production. Towards understanding the molecular mechanisms that regulate TLR7 functionality, we found that TRAM(-/- murine macrophages exhibited a transcriptional and translational impairment in TLR7 mediated RANTES, but not TNFα, production. Suppression of TRAM expression in human macrophages also resulted in an impairment in TLR7 mediated CCL5 and IFN-β, but not TNFα, gene induction. Furthermore, suppression of endogenous human TRAM expression in human macrophages significantly impaired RV16 induced CCL5 and IFNβ, but not TNFα gene induction. Additionally, TRAM-G2A dose-dependently inhibited TLR7 mediated activation of CCL5, IFNβ and IFNα reporter genes. TLR7-mediated phosphorylation and nuclear translocation of IRF3 was impaired in TRAM(-/- cells. Finally, co-immunoprecipitation studies indicated that TRAM physically interacts with MyD88 upon TLR7 stimulation, but not under basal conditions. Our results clearly demonstrate that TRAM plays a, hitherto unappreciated, role in TLR7 signaling through a novel signaling axis containing, but not limited to, MyD88, TRAM and IRF3 towards the activation of anti-viral immunity.

A simple strategy for subcloning and amplifying random multimegabase subchromosomal acentric DNA fragments as double minute chromosomes

International Nuclear Information System (INIS)

Hahn, P.J.; Giddings, L.; Lane, M.J.

1989-01-01

Restriction mapping of relatively large genomes (e.g. human) utilizing randomly generated DNA segments requires high mapping redundancy to successfully organize 'contigs' to represent the entire genome. The number of independent DNA segment maps required is dependent on the average size of a mapping segment; the larger the segment, the fewer required. The authors have developed a strategy for subcloning intact multimegabase subchromosomal fragments as double minute chromosomes. Such fragments could serve as primary mapping elements or as adjunct (linking) fragments to rapidly connect already existent contigs generated using yeast artificial chromosomes or cosmids. They present several lines of evidence supporting the viability of this approach. (1) X-ray treated EMT-6 mouse cells (7.5 Gr.) which are selected over several months with increasing levels of methotrexate (MTX) contain highly amplified circular DNA molecules (double minutes) which include the dihydrofolate reductase (DHFR) gene in a size range between 1,000 and 3,500 kilobases as determined by pulsed-field gel electrophoresis and these acentric chromosomal fragments have been stably maintained in culture for at least a year. (2) Preliminary data based on experiments involving fusion of X-irradiated Chinese Hamster Ovary (CH0 DG44) cells containing randomly inserted cotransfected Neomycin resistance and DHFR genes to mouse EMT-6 cells shows that the linked genes can be readily cotransferred as acentric subchromosomal fragment(s) suitable for gene amplification. (3) The studies of CHO cells with cell fusion transferred X-ray induced chromosomal fragments containing the natural CHO DHFR gene suggest that transferred chromosome fragments undergo gene amplification much more readily than nonfragmented endogenous DHFR genes

Measurement and Modelling of Multicopter UAS Rotor Blades in Hover

Science.gov (United States)

Nowicki, Nathalie

2016-01-01

Multicopters are becoming one of the more common and popular type of unmanned aircraft systems (UAS) which have both civilian and military applications. One example being the concept of drone deliveries proposed by the distribution company Amazon [1]. The electrical propulsion is considered to have both faster and easier deliveries and also environmental benefits compared to other vehicles that still use fossil fuel. Other examples include surveillance and just simple entertainment. The reason behind their success is often said to be due to their small size, relatively low cost, simple structure and finally simple usage. With an increase in the UAS market comes challenges in terms of security, as both people and other aircrafts could be harmed if not used correctly. Therefore further studies and regulations are needed to ensure that future use of drones, especially in the civilian and public sectors, are safe and efficient. Thorough research has been done on full scale, man or cargo transporting, helicopters so that most parts of flight and performance are fairly well understood. Yet not much of it have been verified for small multicopters. Until today many studies and research projects have been done on the control systems, navigation and aerodynamics of multicopters. Many of the methods used today for building multicopters involve a process of trial an error of what will work well together, and once that is accomplished some structural analysis of the multicopter bodies might be done to verify that the product will be strong enough and have a decent aerodynamic performance. However, not much has been done on the research of the rotor blades, especially in terms of structural stress analyses and ways to ensure that the commonly used parts are indeed safe and follow safety measures. Some producers claim that their propellers indeed have been tested, but again that usually tends towards simple fluid dynamic analyses and even simpler stress analyses. There is no real

Synaptic vesicles contain small ribonucleic acids (sRNAs) including transfer RNA fragments (trfRNA) and microRNAs (miRNA).

Science.gov (United States)

Li, Huinan; Wu, Cheng; Aramayo, Rodolfo; Sachs, Matthew S; Harlow, Mark L

2015-10-08

Synaptic vesicles (SVs) are neuronal presynaptic organelles that load and release neurotransmitter at chemical synapses. In addition to classic neurotransmitters, we have found that synaptic vesicles isolated from the electric organ of Torpedo californica, a model cholinergic synapse, contain small ribonucleic acids (sRNAs), primarily the 5' ends of transfer RNAs (tRNAs) termed tRNA fragments (trfRNAs). To test the evolutionary conservation of SV sRNAs we examined isolated SVs from the mouse central nervous system (CNS). We found abundant levels of sRNAs in mouse SVs, including trfRNAs and micro RNAs (miRNAs) known to be involved in transcriptional and translational regulation. This discovery suggests that, in addition to inducing changes in local dendritic excitability through the release of neurotransmitters, SVs may, through the release of specific trfRNAs and miRNAs, directly regulate local protein synthesis. We believe these findings have broad implications for the study of chemical synaptic transmission.

Search for new particles with UA2

International Nuclear Information System (INIS)

Unal, G.

1990-05-01

The upgraded UA2 detector has collected data corresponding to an integrated luminosity of 7.8 pb -1 at a center of mass energy of 630 GeV during the 88 and 89 runs of the CERN pantip collider. A search was performed for the production of new particles: top quark (t) and heavy quark from a hypothetical fourth family (b'), and supersymmetric particles (squarks, and gluinos, and also selectrons and winos through Z decays). No such particles were found, and lower limits on their masses were obtained: mt > 69 GeV/c 2 , mb' > 54 GeV/c 2 at 95% CL, m squarks > 74 GeV/c 2 , m gluinos > 79 GeV/c 2 , m selectrons > 40 GeV/c 2 , mwinos > 45 GeV/c 2 at 90% CL. In the first section the search for squarks and gluinos will be discussed and in the second section the search for top and b' will be described

Results on B physics from UA1

CERN Document Server

Tuominiemi, J

1991-01-01

New result s o n B-physic s fro m th e UA 1 experimen t a t th e CER N proto n -antiproto n collide r ar e reported . The y ar e base d o n th e dat a collecte d i n 1988-89 , correspondin g t o a tota l o f 4. 7 pfcr 1 integrate d luminosity . Th e B°B ° mixin g paramete r X ha s bee n measure d t o b e 0.144±0.037 . Uppe r limit s fo r th e branchin g ratio s o f th e rar e decay s B - » u+u" , B- » u+u"X s an d B d u+u " K* ° hav e bee n determined . Som e result s o n th e searc h fo r th e exclusiv e decay channel s B~>Jyy+K* ° an d B->JA |/-Hj > ar e presented .

Response of the agile antechinus to habitat edge, configuration and condition in fragmented forest.

Directory of Open Access Journals (Sweden)

Christopher P Johnstone

Full Text Available Habitat fragmentation and degradation seriously threaten native animal communities. We studied the response of a small marsupial, the agile antechinus Antechinus agilis, to several environmental variables in anthropogenically fragmented Eucalyptus forest in south-east Australia. Agile antechinus were captured more in microhabitats dominated by woody debris than in other microhabitats. Relative abundances of both sexes were positively correlated with fragment core area. Male and female mass-size residuals were smaller in larger fragments. A health status indicator, haemoglobin-haematocrit residuals (HHR, did not vary as a function of any environmental variable in females, but male HHR indicated better health where sites' microhabitats were dominated by shrubs, woody debris and trees other than Eucalyptus. Females were trapped less often in edge than interior fragment habitat and their physiological stress level, indicated by the neutrophil/lymphocyte ratio in peripheral blood, was higher where fragments had a greater proportion of edge habitat. The latter trend was potentially due to lymphopoenia resulting from stress hormone-mediated leukocyte trafficking. Using multiple indicators of population condition and health status facilitates a comprehensive examination of the effects of anthropogenic disturbances, such as habitat fragmentation and degradation, on native vertebrates. Male agile antechinus' health responded negatively to habitat degradation, whilst females responded negatively to the proportion of edge habitat. The health and condition indicators used could be employed to identify conservation strategies that would make habitat fragments less stressful for this or similar native, small mammals.

Study of charm fragmentation into D{sup *{+-}} mesons in deep-inelastic scattering at HERA

Energy Technology Data Exchange (ETDEWEB)

Aaron, F.D.; Alexa, C.; Preda, T.; Rotaru, M. [National Inst. for Physics and Nuclear Engineering (NIPNE), Bucharest (Romania); Andreev, V.; Belousov, A.; Eliseev, A.; Fomenko, A.; Gogitidze, N.; Lebedev, A.; Loktionova, N.; Malinovski, E.; Rusakov, S.; Sheviakov, I.; Shtarkov, L.N.; Smirnov, P.; Soloviev, Y.; Vazdik, Y. [Lebedev Physical Inst., Moscow (Russian Federation); Antunovic, B.; Aplin, S.; Bacchetta, A.; Bartel, W.; Beckingham, M.; Brandt, G.; Brinkmann, M.; Campbell, A.J.; Cholewa, A.; Deak, M.; Boer, Y. de; Roeck, A. de; Eckerlin, G.; Elsen, E.; Felst, R.; Fleischer, M.; Gayler, J.; Glazov, A.; Grell, B.R.; Haidt, D.; Helebrant, C.; Janssen, M.E.; Jung, H.; Katzy, J.; Kleinwort, C.; Klimkovich, T.; Knutsson, A.; Korbel, V.; Kraemer, M.; Krastev, K.; Kutak, K.; Levonian, S.; List, J.; Lucaci-Timoce, A.I.; Marti, L.; Meyer, A.B.; Meyer, H.; Meyer, J.; Michels, V.; Niebuhr, C.; Nikiforov, A.; Nozicka, M.; Olsson, J.E.; Panagoulias, I.; Papadopoulou, T.; Peng, H.; Pitzl, D.; Placakyte, R.; Radescu, V.; Rurikova, Z.; Salvaire, F.; Schmidt, S.; Schmitt, S.; Sefkow, F.; Staykova, Z.; Steder, M.; Toll, T.; Vargas Trevino, A.; Vinokurova, S.; Wessels, M.; Wissing, C.; Wuensch, E.; Zhu, Y.C. [DESY, Hamburg (Germany); Asmone, A.; Stella, B. [Dipt. di Fisica Univ. di Roma Tre (Italy); INFN Roma 3, Roma (Italy); Astvatsatourov, A.; Delvax, J.; Wolf, E.A. de; Favart, L.; Hreus, T.; Janssen, X.; Marage, P.; Mozer, M.U.; Roland, B.; Roosen, R.; Sunar, D.; Sykora, T.; Mechelen, P. van [Inter-University Inst. for High Energies ULB-VUB, Brussels (Belgium); Univ. Antwerpen, Antwerpen (Belgium); Backovic, S.; Dubak, A.; Lastovicka-Medin, G.; Picuric, I.; Raicevic, N. [Univ. of Montenegro, Faculty of Science, Podgorica (ME); Baghdasaryan, A.; Ghazaryan, S.; Hovhannisyan, A.; Volchinski, V.; Yeganov, V.; Zohrabyan, H. [Yerevan Physics Inst., Yerevan (Armenia); Barrelet, E. [Universites Paris VI and VII, IN2P3-CNRS, LPNHE, Paris (France)] [and others

2009-02-15

The process of charm quark fragmentation is studied using D{sup *{+-}} meson production in deep-inelastic scattering as measured by the H1 detector at HERA. The parameters of fragmentation functions are extracted for QCD models based on leading order matrix elements and DGLAP or CCFM evolution of partons together with string fragmentation and particle decays. Additionally, they are determined for a next-to-leading order QCD calculation in the fixed flavour number scheme using the independent fragmentation of charm quarks to D{sup *{+-}} mesons. Two different regions of phase space are investigated defined by the presence or absence of a jet containing the D{sup *{+-}} meson in the event. The fragmentation parameters extracted for the two phase space regions are found to be different. (orig.)

Study of charm fragmentation into D * ± mesons in deep-inelastic scattering at HERA

Science.gov (United States)

Aaron, F. D.; Alexa, C.; Andreev, V.; Antunovic, B.; Aplin, S.; Asmone, A.; Astvatsatourov, A.; Bacchetta, A.; Backovic, S.; Baghdasaryan, A.; Barrelet, E.; Bartel, W.; Beckingham, M.; Begzsuren, K.; Behnke, O.; Belousov, A.; Berger, N.; Bizot, J. C.; Boenig, M.-O.; Boudry, V.; Bozovic-Jelisavcic, I.; Bracinik, J.; Brandt, G.; Brinkmann, M.; Brisson, V.; Bruncko, D.; Bunyatyan, A.; Buschhorn, G.; Bystritskaya, L.; Campbell, A. J.; Cantun Avila, K. B.; Cassol-Brunner, F.; Cerny, K.; Cerny, V.; Chekelian, V.; Cholewa, A.; Contreras, J. G.; Coughlan, J. A.; Cozzika, G.; Cvach, J.; Dainton, J. B.; Daum, K.; Deák, M.; de Boer, Y.; Delcourt, B.; Del Degan, M.; Delvax, J.; de Roeck, A.; de Wolf, E. A.; Diaconu, C.; Dodonov, V.; Dossanov, A.; Dubak, A.; Eckerlin, G.; Efremenko, V.; Egli, S.; Eliseev, A.; Elsen, E.; Essenov, S.; Falkiewicz, A.; Faulkner, P. J. W.; Favart, L.; Fedotov, A.; Felst, R.; Feltesse, J.; Ferencei, J.; Fleischer, M.; Fomenko, A.; Gabathuler, E.; Gayler, J.; Ghazaryan, S.; Glazov, A.; Glushkov, I.; Goerlich, L.; Goettlich, M.; Gogitidze, N.; Gouzevitch, M.; Grab, C.; Greenshaw, T.; Grell, B. R.; Grindhammer, G.; Habib, S.; Haidt, D.; Hansson, M.; Helebrant, C.; Henderson, R. C. W.; Hennekemper, E.; Henschel, H.; Herrera, G.; Hildebrandt, M.; Hiller, K. H.; Hoffmann, D.; Horisberger, R.; Hovhannisyan, A.; Hreus, T.; Jacquet, M.; Janssen, M. E.; Janssen, X.; Jemanov, V.; Jönsson, L.; Jung, A. W.; Jung, H.; Kapichine, M.; Katzy, J.; Kenyon, I. R.; Kiesling, C.; Klein, M.; Kleinwort, C.; Klimkovich, T.; Kluge, T.; Knutsson, A.; Kogler, R.; Korbel, V.; Kostka, P.; Kraemer, M.; Krastev, K.; Kretzschmar, J.; Kropivnitskaya, A.; Krüger, K.; Kutak, K.; Landon, M. P. J.; Lange, W.; Laštovička-Medin, G.; Laycock, P.; Lebedev, A.; Leibenguth, G.; Lendermann, V.; Levonian, S.; Li, G.; Lipka, K.; Liptaj, A.; List, B.; List, J.; Loktionova, N.; Lopez-Fernandez, R.; Lubimov, V.; Lucaci-Timoce, A.-I.; Lytkin, L.; Makankine, A.; Malinovski, E.; Marage, P.; Marti, L.; Martyn, H.-U.; Maxfield, S. J.; Mehta, A.; Meier, K.; Meyer, A. B.; Meyer, H.; Meyer, H.; Meyer, J.; Michels, V.; Mikocki, S.; Milcewicz-Mika, I.; Moreau, F.; Morozov, A.; Morris, J. V.; Mozer, M. U.; Mudrinic, M.; Müller, K.; Murín, P.; Nankov, K.; Naroska, B.; Naumann, T.; Newman, P. R.; Niebuhr, C.; Nikiforov, A.; Nowak, G.; Nowak, K.; Nozicka, M.; Olivier, B.; Olsson, J. E.; Osman, S.; Ozerov, D.; Palichik, V.; Panagoulias, I.; Pandurovic, M.; Papadopoulou, T.; Pascaud, C.; Patel, G. D.; Pejchal, O.; Peng, H.; Perez, E.; Petrukhin, A.; Picuric, I.; Piec, S.; Pitzl, D.; Plačakytė, R.; Polifka, R.; Povh, B.; Preda, T.; Radescu, V.; Rahmat, A. J.; Raicevic, N.; Raspiareza, A.; Ravdandorj, T.; Reimer, P.; Rizvi, E.; Robmann, P.; Roland, B.; Roosen, R.; Rostovtsev, A.; Rotaru, M.; Ruiz Tabasco, J. E.; Rurikova, Z.; Rusakov, S.; Salek, D.; Salvaire, F.; Sankey, D. P. C.; Sauter, M.; Sauvan, E.; Schmidt, S.; Schmitt, S.; Schmitz, C.; Schoeffel, L.; Schöning, A.; Schultz-Coulon, H.-C.; Sefkow, F.; Shaw-West, R. N.; Sheviakov, I.; Shtarkov, L. N.; Shushkevich, S.; Sloan, T.; Smiljanic, I.; Smirnov, P.; Soloviev, Y.; Sopicki, P.; South, D.; Spaskov, V.; Specka, A.; Staykova, Z.; Steder, M.; Stella, B.; Straumann, U.; Sunar, D.; Sykora, T.; Tchoulakov, V.; Thompson, G.; Thompson, P. D.; Toll, T.; Tomasz, F.; Tran, T. H.; Traynor, D.; Trinh, T. N.; Truöl, P.; Tsakov, I.; Tseepeldorj, B.; Tsurin, I.; Turnau, J.; Tzamariudaki, E.; Urban, K.; Valkárová, A.; Vallée, C.; van Mechelen, P.; Vargas Trevino, A.; Vazdik, Y.; Vinokurova, S.; Volchinski, V.; Wegener, D.; Wessels, M.; Wissing, C.; Wünsch, E.; Yeganov, V.; Žáček, J.; Zálešák, J.; Zhang, Z.; Zhelezov, A.; Zhokin, A.; Zhu, Y. C.; Zimmermann, T.; Zohrabyan, H.; Zomer, F.

2009-02-01

The process of charm quark fragmentation is studied using D * ± meson production in deep-inelastic scattering as measured by the H1 detector at HERA. The parameters of fragmentation functions are extracted for QCD models based on leading order matrix elements and DGLAP or CCFM evolution of partons together with string fragmentation and particle decays. Additionally, they are determined for a next-to-leading order QCD calculation in the fixed flavour number scheme using the independent fragmentation of charm quarks to D * ± mesons. Two different regions of phase space are investigated defined by the presence or absence of a jet containing the D * ± meson in the event. The fragmentation parameters extracted for the two phase space regions are found to be different.

Study of charm fragmentation into D*± mesons in deep-inelastic scattering at HERA

International Nuclear Information System (INIS)

Aaron, F.D.; Alexa, C.; Preda, T.; Rotaru, M.; Andreev, V.; Belousov, A.; Eliseev, A.; Fomenko, A.; Gogitidze, N.; Lebedev, A.; Loktionova, N.; Malinovski, E.; Rusakov, S.; Sheviakov, I.; Shtarkov, L.N.; Smirnov, P.; Soloviev, Y.; Vazdik, Y.; Antunovic, B.; Aplin, S.; Bacchetta, A.; Bartel, W.; Beckingham, M.; Brandt, G.; Brinkmann, M.; Campbell, A.J.; Cholewa, A.; Deak, M.; Boer, Y. de; Roeck, A. de; Eckerlin, G.; Elsen, E.; Felst, R.; Fleischer, M.; Gayler, J.; Glazov, A.; Grell, B.R.; Haidt, D.; Helebrant, C.; Janssen, M.E.; Jung, H.; Katzy, J.; Kleinwort, C.; Klimkovich, T.; Knutsson, A.; Korbel, V.; Kraemer, M.; Krastev, K.; Kutak, K.; Levonian, S.; List, J.; Lucaci-Timoce, A.I.; Marti, L.; Meyer, A.B.; Meyer, H.; Meyer, J.; Michels, V.; Niebuhr, C.; Nikiforov, A.; Nozicka, M.; Olsson, J.E.; Panagoulias, I.; Papadopoulou, T.; Peng, H.; Pitzl, D.; Placakyte, R.; Radescu, V.; Rurikova, Z.; Salvaire, F.; Schmidt, S.; Schmitt, S.; Sefkow, F.; Staykova, Z.; Steder, M.; Toll, T.; Vargas Trevino, A.; Vinokurova, S.; Wessels, M.; Wissing, C.; Wuensch, E.; Zhu, Y.C.; Asmone, A.; Stella, B.; Astvatsatourov, A.; Delvax, J.; Wolf, E.A. de; Favart, L.; Hreus, T.; Janssen, X.; Marage, P.; Mozer, M.U.; Roland, B.; Roosen, R.; Sunar, D.; Sykora, T.; Mechelen, P. van; Backovic, S.; Dubak, A.; Lastovicka-Medin, G.; Picuric, I.; Raicevic, N.; Baghdasaryan, A.; Ghazaryan, S.; Hovhannisyan, A.; Volchinski, V.; Yeganov, V.; Zohrabyan, H.; Barrelet, E.; Begzsuren, K.; Ravdandorj, T.; Tseepeldorj, B.; Behnke, O.; Berger, N.; Degan, M. del; Grab, C.; Leibenguth, G.; Sauter, M.; Zimmermann, T.; Bizot, J.C.; Brisson, V.; Delcourt, B.; Jacquet, M.; Li, G.; Pascaud, C.; Tran, T.H.; Zhang, Z.; Zomer, F.; Boenig, M.O.; South, D.; Wegener, D.; Boudry, V.; Gouzevitch, M.; Moreau, F.; Specka, A.; Bozovic-Jelisavcic, I.; Mudrinic, M.; Pandurovic, M.; Smiljanic, I.; Bracinik, J.; Faulkner, P.J.W.; Kenyon, I.R.; Newman, P.R.; Shaw-West, R.N.; Thompson, P.D.; Bruncko, D.; Cerny, V.; Ferencei, J.; Murin, P.; Tomasz, F.; Bunyatyan, A.; Buschhorn, G.; Chekelian, V.; Dossanov, A.; Grindhammer, G.; Kiesling, C.; Kogler, R.; Liptaj, A.; Olivier, B.; Raspiareza, A.; Shushkevich, S.; Tzamariudaki, E.; Bystritskaya, L.; Efremenko, V.; Essenov, S.; Fedotov, A.; Kropivnitskaya, A.; Lubimov, V.; Ozerov, D.; Petrukhin, A.; Rostovtsev, A.; Zhelezov, A.; Zhokin, A.; Cantun Avila, K.B.; Contreras, J.G.; Ruiz Tabasco, J.E.; Cassol-Brunner, F.; Diaconu, C.; Hoffmann, D.; Sauvan, E.; Trinh, T.N.; Vallee, C.; Cerny, K.; Pejchal, O.; Polifka, R.; Salek, D.; Valkarova, A.; Zacek, J.; Coughlan, J.A.; Morris, J.V.; Sankey, D.P.C.; Cozzika, G.; Feltesse, J.; Perez, E.; Schoeffel, L.; Cvach, J.; Reimer, P.; Zalesak, J.; Dainton, J.B.; Gabathuler, E.; Greenshaw, T.; Klein, M.; Kluge, T.; Kretzschmar, J.; Laycock, P.; Maxfield, S.J.; Mehta, A.; Patel, G.D.; Rahmat, A.J.; Daum, K.; Meyer, H.; Dodonov, V.; Lytkin, L.; Povh, B.; Egli, S.; Hildebrandt, M.; Horisberger, R.; Falkiewicz, A.; Goerlich, L.; Mikocki, S.; Milcewicz-Mika, I.; Nowak, G.; Sopicki, P.; Turnau, J.; Glushkov, I.; Henschel, H.; Hiller, K.H.; Kostka, P.; Lange, W.; Naumann, T.; Piec, S.; Tsurin, I.; Goettlich, M.; Habib, S.; Jemanov, V.; Lipka, K.; List, B.; Naroska, B.; Hansson, M.; Joensson, L.; Osman, S.; Henderson, R.C.W.; Sloan, T.; Hennekemper, E.; Jung, A.W.; Krueger, K.; Lendermann, V.; Meier, K.; Schultz-Coulon, H.C.; Urban, K.; Herrera, G.; Lopez-Fernandez, R.; Kapichine, M.; Makankine, A.; Morozov, A.; Palichik, V.; Spaskov, V.; Tchoulakov, V.; Landon, M.P.J.; Rizvi, E.; Thompson, G.; Traynor, D.; Martyn, H.U.; Mueller, K.; Nowak, K.; Robmann, P.; Schmitz, C.; Straumann, U.; Truoel, P.; Nankov, K.; Tsakov, I.; Schoening, A.

2009-01-01

The process of charm quark fragmentation is studied using D *± meson production in deep-inelastic scattering as measured by the H1 detector at HERA. The parameters of fragmentation functions are extracted for QCD models based on leading order matrix elements and DGLAP or CCFM evolution of partons together with string fragmentation and particle decays. Additionally, they are determined for a next-to-leading order QCD calculation in the fixed flavour number scheme using the independent fragmentation of charm quarks to D *± mesons. Two different regions of phase space are investigated defined by the presence or absence of a jet containing the D *± meson in the event. The fragmentation parameters extracted for the two phase space regions are found to be different. (orig.)

SPERM MORPHOLOGICAL ABNORMALITIES AS INDICATORS OF DNA FRAGMENTATION AND FERTILIZATION IN ASSISTED REPRODUCTION

Directory of Open Access Journals (Sweden)

Barbara Dariš

2018-02-01

Full Text Available Background. To determine the relationship between sperm morphological abnormalities, DNA fragmentation and fertilization rate in IVF and ICSI. Methods. Sperm samples from 10 IVF and 20 ICSI cycles were analyzed. Morphology was assessed according to strict criteria, and DNA fragmentation was measured by terminal deoxynucleotidyl transferase (TdT-mediated fluorescein-dUTP nick end labelling (TUNEL using a flow cytometry. Results. There was a significant difference in the amount of morphological abnormalities between sperm samples with low (< 20 % and high (≥ 20 % degree of DNA fragmentation. The percentages of amorphous heads (10 vs. 4 % and overall head abnormalities (42 vs. 30 % were significantly higher in sperm samples with elevated degree of DNA fragmentation. No correlation was found between sperm DNA fragmentation and fertilization rate after IVF and ICSI. When the predominant morphological abnormality in sperm samples was determined, a negative correlation was found between the percentage of spermatozoa with elongated heads and fertilization rate in ICSI (r = –0.45, P < 0.05. The fertilization rate after IVF was lower in the case of acrosomal abnormalities (35.3 %, compared to the cases of other predominant morphological abnormalities. Conclusions. Head abnormalities, especially amorphous heads, are related to elevated degree of DNA fragmentation. Predominant abnormal form in sperm samples, such as elongated heads and acrosomal abnormalities, may affect fertilization in ART.

Controlled fragmentation

International Nuclear Information System (INIS)

Arnold, Werner

2002-01-01

Contrary to natural fragmentation, controlled fragmentation offers the possibility to adapt fragment parameters like size and mass to the performance requirements in a very flexible way. Known mechanisms like grooves inside the casing, weaken the structure. This is, however, excluded for applications with high accelerations during launch or piercing requirements for example on a semi armor piercing penetrator. Another method to achieve controlled fragmentation with an additional grid layer is presented with which the required grooves are produced 'just in time' inside the casing during detonation of the high explosive. The process of generating the grooves aided by the grid layer was studied using the hydrocode HULL with respect to varying grid designs and material combinations. Subsequent to this, a large range of these theoretically investigated combinations was contemplated in substantial experimental tests. With an optimised grid design and a suitable material selection, the controlled fragment admits a very flexible adaptation to the set requirements. Additional advantages like the increase of perforation performance or incendiary amplification can be realized with the grid layer

Development of U.S. Government General Technical Requirements for UAS Flight Safety Systems Utilizing the Iridium Satellite Constellation

Science.gov (United States)

Murray, Jennifer; Birr, Richard

2010-01-01

This slide presentation reviews the development of technical requirements for Unmanned Aircraft Systems (UAS) utilization of the Iridium Satellite Constellation to provide flight safety. The Federal Aviation Authority (FAA) required an over-the-horizon communication standard to guarantee flight safety before permitting widespread UAS flights in the National Air Space (NAS). This is important to ensure reliable control of UASs during loss-link and over-the-horizon scenarios. The core requirement was to utilize a satellite system to send GPS tracking data and other telemetry from a flight vehicle down to the ground. Iridium was chosen as the system because it is one of the only true satellite systems that has world wide coverage, and the service has a highly reliable link margin. The Iridium system, the flight modems, and the test flight are described.

Macrophage conditioned medium induced cellular network formation in MCF-7 cells through enhanced tunneling nanotube formation and tunneling nanotube mediated release of viable cytoplasmic fragments

International Nuclear Information System (INIS)

Patheja, Pooja; Sahu, Khageswar

2017-01-01

Infiltrating macrophages in tumor microenvironment, through their secreted cytokines and growth factors, regulate several processes of cancer progression such as cancer cell survival, proliferation, invasion, metastasis and angiogenesis. Recently, intercellular cytoplasmic bridges between cancer cells referred as tunneling nanotubes (TNTs) have been recognized as novel mode of intercellular communication between cancer cells. In this study, we investigated the effect of inflammatory mediators present in conditioned medium derived from macrophages on the formation of TNTs in breast adenocarcinoma cells MCF-7. Results show that treatment with macrophage conditioned medium (MφCM) not only enhanced TNT formation between cells but also stimulated the release of independently migrating viable cytoplasmic fragments, referred to as microplasts, from MCF-7 cells. Time lapse microscopy revealed that microplasts were released from parent cancer cells in extracellular space through formation of TNT-like structures. Mitochondria, vesicles and cytoplasm could be transferred from parent cell body to microplasts through connecting TNTs. The microplasts could also be resorbed into the parent cell body by retraction of the connecting TNTs. Microplast formation inhibited in presence cell migration inhibitor, cytochalasin-B. Notably by utilizing migratory machinery within microplasts, distantly located MCF-7 cells formed several TNT based intercellular connections, leading to formation of physically connected network of cells. Together, these results demonstrate novel role of TNTs in microplast formation, novel modes of TNT formation mediated by microplasts and stimulatory effect of MφCM on cellular network formation in MCF-7 cells mediated through enhanced TNT and microplast formation.

Macrophage conditioned medium induced cellular network formation in MCF-7 cells through enhanced tunneling nanotube formation and tunneling nanotube mediated release of viable cytoplasmic fragments

Energy Technology Data Exchange (ETDEWEB)

Patheja, Pooja, E-mail: pooja.patheja8@gmail.com [Laser Biomedical Applications Section, Raja Ramanna Centre for Advanced Technology, Indore 452013, Madhya Pradesh (India); Homi Bhabha National Institute, Training School Complex, Anushaktinagar, Mumbai 400094, Maharashtra (India); Sahu, Khageswar [Laser Biomedical Applications Section, Raja Ramanna Centre for Advanced Technology, Indore 452013, Madhya Pradesh (India)

2017-06-15

Infiltrating macrophages in tumor microenvironment, through their secreted cytokines and growth factors, regulate several processes of cancer progression such as cancer cell survival, proliferation, invasion, metastasis and angiogenesis. Recently, intercellular cytoplasmic bridges between cancer cells referred as tunneling nanotubes (TNTs) have been recognized as novel mode of intercellular communication between cancer cells. In this study, we investigated the effect of inflammatory mediators present in conditioned medium derived from macrophages on the formation of TNTs in breast adenocarcinoma cells MCF-7. Results show that treatment with macrophage conditioned medium (MφCM) not only enhanced TNT formation between cells but also stimulated the release of independently migrating viable cytoplasmic fragments, referred to as microplasts, from MCF-7 cells. Time lapse microscopy revealed that microplasts were released from parent cancer cells in extracellular space through formation of TNT-like structures. Mitochondria, vesicles and cytoplasm could be transferred from parent cell body to microplasts through connecting TNTs. The microplasts could also be resorbed into the parent cell body by retraction of the connecting TNTs. Microplast formation inhibited in presence cell migration inhibitor, cytochalasin-B. Notably by utilizing migratory machinery within microplasts, distantly located MCF-7 cells formed several TNT based intercellular connections, leading to formation of physically connected network of cells. Together, these results demonstrate novel role of TNTs in microplast formation, novel modes of TNT formation mediated by microplasts and stimulatory effect of MφCM on cellular network formation in MCF-7 cells mediated through enhanced TNT and microplast formation.

Lava bubble-wall fragments formed by submarine hydrovolcanic explosions on Lo'ihi Seamount and Kilauea Volcano

Science.gov (United States)

Clague, D.A.; Davis, A.S.; Bischoff, J.L.; Dixon, J.E.; Geyer, R.

2000-01-01

Glassy bubble-wall fragments, morphologically similar to littoral limu o Pele, have been found in volcanic sands erupted on Lo'ihi Seamount and along the submarine east rift zone of Kilauea Volcano. The limu o Pele fragments are undegassed with respect to H2O and S and formed by mild steam explosions. Angular glass sand fragments apparently form at similar, and greater, depths by cooling-contraction granulation. The limu o Pele fragments from Lo'ihi Seamount are dominantly tholeiitic basalt containing 6.25-7.25% MgO. None of the limu o Pele samples from Lo'ihi Seamount contains less than 5.57% MgO, suggesting that higher viscosity magmas do not form lava bubbles. The dissolved CO2 and H2O contents of 7 of the limu o Pele fragments indicate eruption at 1200??300 m depth (120??30 bar). These pressures exceed that generally thought to limit steam explosions. We conclude that hydrovolcanic eruptions are possible, with appropriate pre-mixing conditions, at pressures as great as 120 bar.

Cu-Mediated Stille Reactions of Sterically Congested Fragments: Towards the Total Synthesis of Zoanthamine

DEFF Research Database (Denmark)

Nielsen, Thomas E.; Le Quement, Sebastian; Juhl, Martin

2005-01-01

A study on the Stille reaction of alkenyl iodides and starmanes with structural resemblance to retrosynthetic fragments of a projected total synthesis of the marine alkaloid zoanthamine was carried out. A range of reaction conditions was examined, and a protocol developed by Corey utilizing excess...

Effects of Atorvastatin calcium combined with Aspirin on serum levels of Hcy, NSE, UA, hs-CRP and inflammatory factors of patients with cerebral infarction

Directory of Open Access Journals (Sweden)

Shu-Qin Zhang

2017-03-01

Full Text Available Objective: To study the effects of Atorvastatin calcium combined with Aspirin on serum levels of homocysteine (Hcy, neuron-specific enolase (NSE, uric acid (UA, high sensitity C-reactive protein (hs-CRP and inflammatory factors of patients with cerebral infarction. Methods: 100 cases of patients with cerebral infarction from March 2014 to May 2016 were treated in the Department of Neurology of our hospital and affiliated to Huazhong University of Science and Technology of traditional Chinese medicine and Western Medicine. The subjects were divided into the control group (n=50 and the treatment group (n=50 randomly. The control group was treated with Aspirin, the treatment group were treated with Atorvastatin calcium combined with Aspirin. The two groups were treated for 28 d. The serum levels of Hcy, NSE, UA, hs- CRP, interleukin-6 (IL-6, interleukin-8 (IL-8 and tumor necrosis factor-α (TNF-α of the two groups before and after treatment were compared. Results: There were no significantly differences of the serum levels of the Hcy, NSE, UA and hs-CRP of the two groups before treatment (P>0.05. After treatment, the serum levels of the Hcy, NSE, UA and hs-CRP of the two groups were significantly lower than before treatment, and that of the treatment group were significantly lower than the control group (P0.05. After treatment, the serum levels of the IL-6, IL-8 and TNF-α of the two groups were significantly lower than before treatment, and that of the treatment group were significantly lower than the control group (P<0.05. Conclusions: Atorvastatin calcium combined with Aspirin can significantly reduce the serum levels of Hcy, NSE, UA, hs-CRP, IL-6, IL-8 and TNF-α of the patients with cerebral infarction.

Study of Charm Fragmentation into $D^{*\\pm}$ Mesons in Deep-Inelastic Scattering at HERA

CERN Document Server

Aaron, F.D.; Andreev, V.; Antunovic, B.; Aplin, S.; Asmone, A.; Astvatsatourov, A.; Bacchetta, A.; Backovic, S.; Baghdasaryan, A.; Barrelet, E.; Bartel, W.; Beckingham, M.; Begzsuren, K.; Behnke, O.; Belousov, A.; Berger, N.; Bizot, J.C.; Boenig, M.-O.; Boudry, V.; Bozovic-Jelisavcic, I.; Bracinik, J.; Brandt, G.; Brinkmann, M.; Brisson, V.; Bruncko, D.; Bunyatyan, A.; Buschhorn, G.; Bystritskaya, L.; Campbell, A.J.; Cantun Avila, K.B.; Cassol-Brunner, F.; Cerny, K.; Cerny, V.; Chekelian, V.; Cholewa, A.; Contreras, J.G.; Coughlan, J.A.; Cozzika, G.; Cvach, J.; Dainton, J.B.; Daum, K.; Deak, M.; de Boer, Y.; Delcourt, B.; Del Degan, M.; Delvax, J.; De Roeck, A.; De Wolf, E.A.; Diaconu, C.; Dodonov, V.; Dossanov, A.; Dubak, A.; Eckerlin, G.; Efremenko, V.; Egli, S.; Eliseev, A.; Elsen, E.; Essenov, S.; Falkiewicz, A.; Faulkner, P.J.W.; Favart, L.; Fedotov, A.; Felst, R.; Feltesse, J.; Ferencei, J.; Fleischer, M.; Fomenko, A.; Gabathuler, E.; Gayler, J.; Ghazaryan, Samvel; Glazov, A.; Glushkov, I.; Goerlich, L.; Goettlich, M.; Gogitidze, N.; Gouzevitch, M.; Grab, C.; Greenshaw, T.; Grell, B.R.; Grindhammer, G.; Habib, S.; Haidt, D.; Hansson, M.; Helebrant, C.; Henderson, R.C.W.; Hennekemper, E.; Henschel, H.; Herrera, G.; Hildebrandt, M.; Hiller, K.H.; Hoffmann, D.; Horisberger, R.; Hovhannisyan, A.; Hreus, T.; Jacquet, M.; Janssen, M.E.; Janssen, X.; Jemanov, V.; Jonsson, L.; Jung, Andreas Werner; Jung, H.; Kapichine, M.; Katzy, J.; Kenyon, I.R.; Kiesling, C.; Klein, M.; Kleinwort, C.; Klimkovich, T.; Kluge, T.; Knutsson, A.; Kogler, R.; Korbel, V.; Kostka, P.; Kraemer, M.; Krastev, K.; Kretzschmar, J.; Kropivnitskaya, A.; Kruger, K.; Kutak, K.; Landon, M.P.J.; Lange, W.; Lastovicka-Medin, G.; Laycock, P.; Lebedev, A.; Leibenguth, G.; Lendermann, V.; Levonian, S.; Li, G.; Lipka, K.; Liptaj, A.; List, B.; List, J.; Loktionova, N.; Lopez-Fernandez, R.; Lubimov, V.; Lucaci-Timoce, A.-I.; Lytkin, L.; Makankine, A.; Malinovski, E.; Marage, P.; Marti, Ll.; Martyn, H.-U.; Maxfield, S.J.; Mehta, A.; Meier, K.; Meyer, A.B.; Meyer, H.; Meyer, H.; Meyer, J.; Michels, V.; Mikocki, S.; Milcewicz-Mika, I.; Moreau, F.; Morozov, A.; Morris, J.V.; Mozer, Matthias Ulrich; Mudrinic, M.; Muller, K.; Murin, P.; Nankov, K.; Naroska, B.; Naumann, Th.; Newman, Paul R.; Niebuhr, C.; Nikiforov, A.; Nowak, G.; Nowak, K.; Nozicka, M.; Olivier, B.; Olsson, J.E.; Osman, S.; Ozerov, D.; Palichik, V.; Panagoulias, I.; Pandurovic, M.; Papadopoulou, Th.; Pascaud, C.; Patel, G.D.; Pejchal, O.; Peng, H.; Perez, E.; Petrukhin, A.; Picuric, I.; Piec, S.; Pitzl, D.; Placakyte, R.; Polifka, R.; Povh, B.; Preda, T.; Radescu, V.; Rahmat, A.J.; Raicevic, N.; Raspiareza, A.; Ravdandorj, T.; Reimer, P.; Rizvi, E.; Robmann, P.; Roland, B.; Roosen, R.; Rostovtsev, A.; Rotaru, M.; Ruiz Tabasco, J.E.; Rurikova, Z.; Rusakov, S.; Salek, D.; Salvaire, F.; Sankey, D.P.C.; Sauter, M.; Sauvan, E.; Schmidt, S.; Schmitt, S.; Schmitz, C.; Schoeffel, L.; Schoning, A.; Schultz-Coulon, H.-C.; Sefkow, F.; Shaw-West, R.N.; Sheviakov, I.; Shtarkov, L.N.; Shushkevich, S.; Sloan, T.; Smiljanic, Ivan; Smirnov, P.; Soloviev, Y.; Sopicki, P.; South, D.; Spaskov, V.; Specka, Arnd E.; Staykova, Z.; Steder, M.; Stella, B.; Straumann, U.; Sunar, D.; Sykora, T.; Tchoulakov, V.; Thompson, G.; Thompson, P.D.; Toll, T.; Tomasz, F.; Tran, T.H.; Traynor, D.; Trinh, T.N.; Truol, P.; Tsakov, I.; Tseepeldorj, B.; Tsurin, I.; Turnau, J.; Tzamariudaki, E.; Urban, K.; Valkarova, A.; Vallee, C.; Van Mechelen, P.; Vargas Trevino, A.; Vazdik, Y.; Vinokurova, S.; Volchinski, V.; Wegener, D.; Wessels, M.; Wissing, Ch.; Wunsch, E.; Yeganov, V.; Zacek, J.; Zalesak, J.; Zhang, Z.; Zhelezov, A.; Zhokin, A.; Zhu, Y.C.; Zimmermann, T.; Zohrabyan, H.; Zomer, F.

2009-01-01

The process of charm quark fragmentation is studied using $D^{*\\pm}$ meson production in deep-inelastic scattering as measured by the H1 detector at HERA. Two different regions of phase space are investigated defined by the presence or absence of a jet containing the $D^{*\\pm}$ meson in the event. The parameters of fragmentation functions are extracted for QCD models based on leading order matrix elements and DGLAP or CCFM evolution of partons together with string fragmentation and particle decays. Additionally, they are determined for a next-to-leading order QCD calculation in the fixed flavour number scheme using the independent fragmentation of charm quarks to $D^{*\\pm}$ mesons.

Fragmentation cross sections outside the limiting-fragmentation regime

CERN Document Server

Sümmerer, K

2003-01-01

The empirical parametrization of fragmentation cross sections, EPAX, has been successfully applied to estimate fragment production cross sections in reactions of heavy ions at high incident energies. It is checked whether a similar parametrization can be found for proton-induced spallation around 1 GeV, the range of interest for ISOL-type RIB facilities. The validity of EPAX for medium-energy heavy-ion induced reactions is also checked. Only a few datasets are available, but in general EPAX predicts the cross sections rather well, except for fragments close to the projectile, where the experimental cross sections are found to be larger.

Universality of fragment shapes.

Science.gov (United States)

Domokos, Gábor; Kun, Ferenc; Sipos, András Árpád; Szabó, Tímea

2015-03-16

The shape of fragments generated by the breakup of solids is central to a wide variety of problems ranging from the geomorphic evolution of boulders to the accumulation of space debris orbiting Earth. Although the statistics of the mass of fragments has been found to show a universal scaling behavior, the comprehensive characterization of fragment shapes still remained a fundamental challenge. We performed a thorough experimental study of the problem fragmenting various types of materials by slowly proceeding weathering and by rapid breakup due to explosion and hammering. We demonstrate that the shape of fragments obeys an astonishing universality having the same generic evolution with the fragment size irrespective of materials details and loading conditions. There exists a cutoff size below which fragments have an isotropic shape, however, as the size increases an exponential convergence is obtained to a unique elongated form. We show that a discrete stochastic model of fragmentation reproduces both the size and shape of fragments tuning only a single parameter which strengthens the general validity of the scaling laws. The dependence of the probability of the crack plan orientation on the linear extension of fragments proved to be essential for the shape selection mechanism.

Maternal educational level and preschool children's consumption of high-calorie snacks and sugar-containing beverages: mediation by the family food environment.

Science.gov (United States)

Wijtzes, Anne I; Jansen, Wilma; Jansen, Pauline W; Jaddoe, Vincent W V; Hofman, Albert; Raat, Hein

2013-11-01

To examine the associations between maternal educational level and preschoolers' consumption of high-calorie snacks and sugar-containing beverages, and to assess the mediating effects of variables relating to the family food environment. We analyzed data from 2814 native Dutch preschoolers enrolled in a birth cohort study in Rotterdam (the Netherlands), between 2002 and 2006. Logistic regression models were used to calculate odds ratios of snacking ≥ 2 times/day and consuming sugar-containing beverages ≥ 3 glasses/day for children of mothers with low, mid-low, and mid-high educational levels (reference group: high educational level), before and after adjustment for mediators. Children of low and mid-low educated mothers were significantly more likely to consume excessive amounts of high-calorie snacks and sugar-containing beverages compared with children of high educated mothers, with the highest odds in children of low educated mothers (OR: 2.44; 95% CI: 1.84, 3.23 and OR: 2.46; 95% CI: 1.87, 3.24 respectively). Parental feeding practices, parental consumption of sugar-containing beverages, and children's television time partly explained these associations. Maternal educational level is inversely related to preschoolers' consumption of high-calorie snacks and sugar-containing beverages. Targeting the family food environment may be an effective way of reducing educational inequalities in children's unhealthy dietary behaviors. © 2013.

Progress towards construction of a total restriction fragment map of a human chromosome.

NARCIS (Netherlands)

H. Vissing; F.G. Grosveld (Frank); E. Solomon; G. Moore; N. Lench; N. Shennan; R. Williamson

1987-01-01

textabstractWe present an approach to the construction of an overlapping restriction fragment map of a single human chromosome. A genomic cosmid library genome was constructed from a mouse-human hybrid cell line containing chromosome 17 as its only human genetic component. Cosmids containing human

Anomalous nuclear fragments

International Nuclear Information System (INIS)

Karmanov, V.A.

1983-01-01

Experimental data are given, the status of anomalon problem is discussed, theoretical approaches to this problem are outlined. Anomalons are exotic objects formed following fragmentation of nuclei-targets under the effect of nuclei - a beam at the energy of several GeV/nucleon. These nuclear fragments have an anomalously large cross section of interaction and respectively, small free path, considerably shorter than primary nuclei have. The experimental daa are obtained in accelerators following irradiation of nuclear emulsions by 16 O, 56 Fe, 40 Ar beams, as well as propane by 12 C beams. The experimental data testify to dependence of fragment free path on the distance L from the point of the fragment formation. A decrease in the fragment free path is established more reliably than its dependence on L. The problem of the anomalon existence cannot be yet considered resolved. Theoretical models suggested for explanation of anomalously large cross sections of nuclear fragment interaction are variable and rather speculative

A Recombinant Fragment of Human Surfactant Protein D induces Apoptosis in Pancreatic Cancer Cell Lines via Fas-Mediated Pathway.

Science.gov (United States)

Kaur, Anuvinder; Riaz, Muhammad Suleman; Murugaiah, Valarmathy; Varghese, Praveen Mathews; Singh, Shiv K; Kishore, Uday

2018-01-01

Human surfactant protein D (SP-D) is a potent innate immune molecule, which is emerging as a key molecule in the recognition and clearance of altered and non-self targets. Previous studies have shown that a recombinant fragment of human SP-D (rfhSP-D) induced apoptosis via p53-mediated apoptosis pathway in an eosinophilic leukemic cell line, AML14.3D10. Here, we report the ability of rfhSP-D to induce apoptosis via TNF-α/Fas-mediated pathway regardless of the p53 status in human pancreatic adenocarcinoma using Panc-1 (p53 mt ), MiaPaCa-2 (p53 mt ), and Capan-2 (p53 wt ) cell lines. Treatment of these cell lines with rfhSP-D for 24 h caused growth arrest in G1 cell cycle phase and triggered transcriptional upregulation of pro-apoptotic factors such as TNF-α and NF-κB. Translocation of NF-κB from the cytoplasm into the nucleus of pancreatic cancer cell lines was observed via immunofluorescence microscopy following treatment with rfhSP-D as compared to the untreated cells. The rfhSP-D treatment caused upregulation of pro-apoptotic marker Fas, as analyzed via qPCR and western blot, which then triggered caspase cascade, as evident from cleavage of caspase 8 and 3 analyzed via western blot at 48 h. The cell number following the rfhSP-D treatment was reduced in the order of Panc-1 (~67%) > MiaPaCa-2 (~60%) > Capan-2 (~35%). This study appears to suggest that rfhSP-D can potentially be used to therapeutically target pancreatic cancer cells irrespective of their p53 phenotype.

Dynameomics: Data-driven methods and models for utilizing large-scale protein structure repositories for improving fragment-based loop prediction

Science.gov (United States)

Rysavy, Steven J; Beck, David AC; Daggett, Valerie

2014-01-01

Protein function is intimately linked to protein structure and dynamics yet experimentally determined structures frequently omit regions within a protein due to indeterminate data, which is often due protein dynamics. We propose that atomistic molecular dynamics simulations provide a diverse sampling of biologically relevant structures for these missing segments (and beyond) to improve structural modeling and structure prediction. Here we make use of the Dynameomics data warehouse, which contains simulations of representatives of essentially all known protein folds. We developed novel computational methods to efficiently identify, rank and retrieve small peptide structures, or fragments, from this database. We also created a novel data model to analyze and compare large repositories of structural data, such as contained within the Protein Data Bank and the Dynameomics data warehouse. Our evaluation compares these structural repositories for improving loop predictions and analyzes the utility of our methods and models. Using a standard set of loop structures, containing 510 loops, 30 for each loop length from 4 to 20 residues, we find that the inclusion of Dynameomics structures in fragment-based methods improves the quality of the loop predictions without being dependent on sequence homology. Depending on loop length, ∼25–75% of the best predictions came from the Dynameomics set, resulting in lower main chain root-mean-square deviations for all fragment lengths using the combined fragment library. We also provide specific cases where Dynameomics fragments provide better predictions for NMR loop structures than fragments from crystal structures. Online access to these fragment libraries is available at http://www.dynameomics.org/fragments. PMID:25142412

Dynameomics: data-driven methods and models for utilizing large-scale protein structure repositories for improving fragment-based loop prediction.

Science.gov (United States)

Rysavy, Steven J; Beck, David A C; Daggett, Valerie

2014-11-01

Protein function is intimately linked to protein structure and dynamics yet experimentally determined structures frequently omit regions within a protein due to indeterminate data, which is often due protein dynamics. We propose that atomistic molecular dynamics simulations provide a diverse sampling of biologically relevant structures for these missing segments (and beyond) to improve structural modeling and structure prediction. Here we make use of the Dynameomics data warehouse, which contains simulations of representatives of essentially all known protein folds. We developed novel computational methods to efficiently identify, rank and retrieve small peptide structures, or fragments, from this database. We also created a novel data model to analyze and compare large repositories of structural data, such as contained within the Protein Data Bank and the Dynameomics data warehouse. Our evaluation compares these structural repositories for improving loop predictions and analyzes the utility of our methods and models. Using a standard set of loop structures, containing 510 loops, 30 for each loop length from 4 to 20 residues, we find that the inclusion of Dynameomics structures in fragment-based methods improves the quality of the loop predictions without being dependent on sequence homology. Depending on loop length, ∼ 25-75% of the best predictions came from the Dynameomics set, resulting in lower main chain root-mean-square deviations for all fragment lengths using the combined fragment library. We also provide specific cases where Dynameomics fragments provide better predictions for NMR loop structures than fragments from crystal structures. Online access to these fragment libraries is available at http://www.dynameomics.org/fragments. © 2014 The Protein Society.

Albumin adsorption onto surfaces of urine collection and analysis containers.

Science.gov (United States)

Robinson, Mary K; Caudill, Samuel P; Koch, David D; Ritchie, James; Hortin, Glen; Eckfeldt, John H; Sandberg, Sverre; Williams, Desmond; Myers, Gary; Miller, W Greg

2014-04-20

Adsorption of albumin onto urine collection and analysis containers may cause falsely low concentrations. We added (125)I-labeled human serum albumin to urine and to phosphate buffered solutions, incubated them with 22 plastic container materials and measured adsorption by liquid scintillation counting. Adsorption of urine albumin (UA) at 5-6 mg/l was containers, and to instrument sample cups and showed <1% change in concentration at 5 mg/l and <0.5% change at 20 mg/l or higher concentrations. Adsorption of albumin from phosphate buffered solutions (2-28%) was larger than that from urine. Albumin adsorption differed among urine samples and plastic materials, but the total influence of adsorption was <1% for all materials and urine samples tested. Adsorption of albumin from phosphate buffered solutions was larger than that from urine and could be a limitation for preparations used as calibrators. Copyright © 2014 Elsevier B.V. All rights reserved.

Development of a GAL4-VP16/UAS trans-activation system for tissue specific expression in Medicago truncatula.

Directory of Open Access Journals (Sweden)

Amélie Sevin-Pujol

Full Text Available Promoters with tissue-specific activity are very useful to address cell-autonomous and non cell autonomous functions of candidate genes. Although this strategy is widely used in Arabidopsis thaliana, its use to study tissue-specific regulation of root symbiotic interactions in legumes has only started recently. Moreover, using tissue specific promoter activity to drive a GAL4-VP16 chimeric transcription factor that can bind short upstream activation sequences (UAS is an efficient way to target and enhance the expression of any gene of interest. Here, we developed a collection of promoters with different root cell layers specific activities in Medicago truncatula and tested their abilities to drive the expression of a chimeric GAL4-VP16 transcription factor in a trans-activation UAS: β-Glucuronidase (GUS reporter gene system. By developing a binary vector devoted to modular Golden Gate cloning together with a collection of adapted tissue specific promoters and coding sequences we could test the activity of four of these promoters in trans-activation GAL4/UAS systems and compare them to "classical" promoter GUS fusions. Roots showing high levels of tissue specific expression of the GUS activity could be obtained with this trans-activation system. We therefore provide the legume community with new tools for efficient modular Golden Gate cloning, tissue specific expression and a trans-activation system. This study provides the ground work for future development of stable transgenic lines in Medicago truncatula.

Toward The Reconstitution of the Maturation of Okazaki Fragments Multiprotein Complex in Human At The Single Molecule Level

KAUST Repository

Joudeh, Luay

2017-01-01

The maturation of Okazaki fragments on the lagging strand in eukaryotes is mediated by a highly coordinated multistep process involving several proteins that ensure the accurate and efficient replication of genomic DNA. Human proliferating cell

Fine-resolution repeat topographic surveying of dryland landscapes using UAS-based structure-from-motion photogrammetry: Assessing accuracy and precision against traditional ground-based erosion measurements

Science.gov (United States)

Gillian, Jeffrey K.; Karl, Jason W.; Elaksher, Ahmed; Duniway, Michael C.

2017-01-01

Structure-from-motion (SfM) photogrammetry from unmanned aerial system (UAS) imagery is an emerging tool for repeat topographic surveying of dryland erosion. These methods are particularly appealing due to the ability to cover large landscapes compared to field methods and at reduced costs and finer spatial resolution compared to airborne laser scanning. Accuracy and precision of high-resolution digital terrain models (DTMs) derived from UAS imagery have been explored in many studies, typically by comparing image coordinates to surveyed check points or LiDAR datasets. In addition to traditional check points, this study compared 5 cm resolution DTMs derived from fixed-wing UAS imagery with a traditional ground-based method of measuring soil surface change called erosion bridges. We assessed accuracy by comparing the elevation values between DTMs and erosion bridges along thirty topographic transects each 6.1 m long. Comparisons occurred at two points in time (June 2014, February 2015) which enabled us to assess vertical accuracy with 3314 data points and vertical precision (i.e., repeatability) with 1657 data points. We found strong vertical agreement (accuracy) between the methods (RMSE 2.9 and 3.2 cm in June 2014 and February 2015, respectively) and high vertical precision for the DTMs (RMSE 2.8 cm). Our results from comparing SfM-generated DTMs to check points, and strong agreement with erosion bridge measurements suggests repeat UAS imagery and SfM processing could replace erosion bridges for a more synoptic landscape assessment of shifting soil surfaces for some studies. However, while collecting the UAS imagery and generating the SfM DTMs for this study was faster than collecting erosion bridge measurements, technical challenges related to the need for ground control networks and image processing requirements must be addressed before this technique could be applied effectively to large landscapes.

Nuclear fragmentation

International Nuclear Information System (INIS)

Chung, K.C.

1989-01-01

An introduction to nuclear fragmentation, with emphasis in percolation ideas, is presented. The main theoretical models are discussed and as an application, the uniform expansion approximation is presented and the statistical multifragmentation model is used to calculate the fragment energy spectra. (L.C.)

A putative non-hr origin of DNA replication in the HindIII-K fragment of Autographa californica multiple nucleocapsid nuclear polyhedrosis virus

NARCIS (Netherlands)

Kool, M.; Goldbach, R. W.; Vlak, J. M.

1994-01-01

In addition to the seven known homologous regions (hrs) of Autographa californica multiple nucleocapsid polyhedrosis virus (AcMNPV) the HindIII-K fragment was also found to carry a putative ori, although this fragment does not contain an hr. Deletion analysis showed that this ori contains several

Using the MicroASAR on the NASA SIERRA UAS in the Characterization of Arctic Sea Ice Experiment

Science.gov (United States)

2010-05-01

such that the dechirped signal is at an intermediate frequency. Feedthrough rejection is done by a surface acoustic wave (SAW) filter with its first...Fig. 3. NASA SIERRA UAS 3-View and Specifications • Up-looking and down-looking shortwave spectrometers. • Down-looking temperature sensors ( pyrometers

The calibration of the central electromagnetic calorimeter of UA1 proton-antiproton experiment at CERN

International Nuclear Information System (INIS)

Malosse, J.J.

1987-03-01

The most important result of the UA1 experiment at CERN has been the discovery of the weak intermediate vector bosons W + , W - and Z 0 . We describe the calibration of the electromagnetic calorimeter, which gives the signature of the electronic mode of desintegration of the intermediate bosons and measures their masses. We shall discuss this process and give some experimental results [fr

A Model for a Single Unmanned Aircraft Systems (UAS) Program Office Managing Joint ISR Capabilities

Science.gov (United States)

2017-10-01

managing the efforts of medium and high altitude UAS assets from a Joint perspective while employing agile principles versus the duplicative efforts... managed using agile principles , could provide greater capability to the warfighter. Consolidation cost efficiencies became an independent variable...ensure quality and value are delivered. Senior leadership buy in is needed, along with an understanding of agile principles and management style that

Computational identification of antigen-binding antibody fragments.

Science.gov (United States)

Burkovitz, Anat; Leiderman, Olga; Sela-Culang, Inbal; Byk, Gerardo; Ofran, Yanay

2013-03-01

Determining which parts of the Ab are essential for Ag recognition and binding is crucial for understanding B cell-mediated immunity. Identification of fragments of Abs that maintain specificity to the Ag will also allow for the development of improved Ab-based therapy and diagnostics. In this article, we show that structural analysis of Ab-Ag complexes reveals which fragments of the Ab may bind the Ag on their own. In particular, it is possible to predict whether a given CDR is likely to bind the Ag as a peptide by analyzing the energetic contribution of each CDR to Ag binding and by assessing to what extent the interaction between that CDR and the Ag depends on other CDRs. To demonstrate this, we analyzed five Ab-Ag complexes and predicted for each of them which of the CDRs may bind the Ag on its own as a peptide. We then show that these predictions are in agreement with our experimental analysis and with previously published experimental results. These findings promote our understanding of the modular nature of Ab-Ag interactions and lay the foundation for the rational design of active CDR-derived peptides.

A receptor tyrosine kinase inhibitor, Tyrphostin A9 induces cancer cell death through Drp1 dependent mitochondria fragmentation

International Nuclear Information System (INIS)

Park, So Jung; Park, Young Jun; Shin, Ji Hyun; Kim, Eun Sung; Hwang, Jung Jin; Jin, Dong-Hoon; Kim, Jin Cheon; Cho, Dong-Hyung

2011-01-01

Highlights: → We screened and identified Tyrphostin A9, a receptor tyrosine kinase inhibitor as a strong mitochondria fission inducer. → Tyrphostin A9 treatment promotes mitochondria dysfunction and contributes to cytotoxicity in cancer cells. → Tyrphostin A9 induces apoptotic cell death through a Drp1-mediated pathway. → Our studies suggest that Tyrphostin A9 induces mitochondria fragmentation and apoptotic cell death via Drp1 dependently. -- Abstract: Mitochondria dynamics controls not only their morphology but also functions of mitochondria. Therefore, an imbalance of the dynamics eventually leads to mitochondria disruption and cell death. To identify specific regulators of mitochondria dynamics, we screened a bioactive chemical compound library and selected Tyrphostin A9, a tyrosine kinase inhibitor, as a potent inducer of mitochondrial fission. Tyrphostin A9 treatment resulted in the formation of fragmented mitochondria filament. In addition, cellular ATP level was decreased and the mitochondrial membrane potential was collapsed in Tyr A9-treated cells. Suppression of Drp1 activity by siRNA or over-expression of a dominant negative mutant of Drp1 inhibited both mitochondrial fragmentation and cell death induced by Tyrpohotin A9. Moreover, treatment of Tyrphostin A9 also evoked mitochondrial fragmentation in other cells including the neuroblastomas. Taken together, these results suggest that Tyrphostin A9 induces Drp1-mediated mitochondrial fission and apoptotic cell death.

Titanocene-Mediated Dinitrile Coupling: A Divergent Route to Nitrogen-Containing Polycyclic Aromatic Hydrocarbons.

Science.gov (United States)

Kiel, Gavin R; Samkian, Adrian E; Nicolay, Amélie; Witzke, Ryan J; Tilley, T Don

2018-02-21

A general synthetic strategy for the construction of large, nitrogen-containing polycyclic aromatic hydrocarbons (PAHs) is reported. The strategy involves two key steps: (1) a titanocene-mediated reductive cyclization of an oligo(dinitrile) precursor to form a PAH appended with di(aza)titanacyclopentadiene functionality; (2) a divergent titanocene transfer reaction, which allows final-step installation of one or more o-quinone, diazole, or pyrazine units into the PAH framework. The new methodology enables rational, late-stage control of HOMO and LUMO energy levels and thus photophysical and electrochemical properties, as revealed by UV/vis and fluorescence spectroscopy, cyclic voltammetry, and DFT calculations. More generally, this contribution presents the first productive use of di(aza)metallacyclopentadiene intermediates in organic synthesis, including the first formal [2 + 2 + 2] reaction to form a pyrazine ring.

Mediation pathways and effects of green structures on respiratory mortality via reducing air pollution.

Science.gov (United States)

Shen, Yu-Sheng; Lung, Shih-Chun Candice

2017-02-23

Previous studies have shown both health and environmental benefits of green spaces, especially in moderating temperature and reducing air pollution. However, the characteristics of green structures have been overlooked in previous investigations. In addition, the mediation effects of green structures on respiratory mortality have not been assessed. This study explores the potential mediation pathways and effects of green structure characteristics on respiratory mortality through temperature, primary and secondary air pollutants separately using partial least squares model with data from Taiwan. The measurable characteristics of green structure include the largest patch percentage, landscape proportion, aggregation, patch distance, and fragmentation. The results showed that mortality of pneumonia and chronic lower respiratory diseases could be reduced by minimizing fragmentation and increasing the largest patch percentage of green structure, and the mediation effects are mostly through reducing air pollutants rather than temperature. Moreover, a high proportion of but fragmented green spaces would increase secondary air pollutants and enhance health risks; demonstrating the deficiency of traditional greening policy with primary focus on coverage ratio. This is the first research focusing on mediation effects of green structure characteristics on respiratory mortality, revealing that appropriate green structure planning can be a useful complementary strategy in environmental health management.

Macrophage conditioned medium induced cellular network formation in MCF-7 cells through enhanced tunneling nanotube formation and tunneling nanotube mediated release of viable cytoplasmic fragments.

Science.gov (United States)

Patheja, Pooja; Sahu, Khageswar

2017-06-15

Infiltrating macrophages in tumor microenvironment, through their secreted cytokines and growth factors, regulate several processes of cancer progression such as cancer cell survival, proliferation, invasion, metastasis and angiogenesis. Recently, intercellular cytoplasmic bridges between cancer cells referred as tunneling nanotubes (TNTs) have been recognized as novel mode of intercellular communication between cancer cells. In this study, we investigated the effect of inflammatory mediators present in conditioned medium derived from macrophages on the formation of TNTs in breast adenocarcinoma cells MCF-7. Results show that treatment with macrophage conditioned medium (MɸCM) not only enhanced TNT formation between cells but also stimulated the release of independently migrating viable cytoplasmic fragments, referred to as microplasts, from MCF-7 cells. Time lapse microscopy revealed that microplasts were released from parent cancer cells in extracellular space through formation of TNT-like structures. Mitochondria, vesicles and cytoplasm could be transferred from parent cell body to microplasts through connecting TNTs. The microplasts could also be resorbed into the parent cell body by retraction of the connecting TNTs. Microplast formation inhibited in presence cell migration inhibitor, cytochalasin-B. Notably by utilizing migratory machinery within microplasts, distantly located MCF-7 cells formed several TNT based intercellular connections, leading to formation of physically connected network of cells. Together, these results demonstrate novel role of TNTs in microplast formation, novel modes of TNT formation mediated by microplasts and stimulatory effect of MɸCM on cellular network formation in MCF-7 cells mediated through enhanced TNT and microplast formation. Copyright © 2017 Elsevier Inc. All rights reserved.

Generation of biologically active endostatin fragments from human collagen XVIII by distinct matrix metalloproteases

International Nuclear Information System (INIS)

Heljasvaara, Ritva; Nyberg, Pia; Luostarinen, Jani; Parikka, Mataleena; Heikkilae, Pia; Rehn, Marko; Sorsa, Timo; Salo, Tuula; Pihlajaniemi, Taina

2005-01-01

Endostatin, a potent inhibitor of endothelial cell proliferation, migration, angiogenesis and tumor growth, is proteolytically cleaved from the C-terminal noncollagenous NC1 domain of type XVIII collagen. We investigated the endostatin formation from human collagen XVIII by several MMPs in vitro. The generation of endostatin fragments differing in molecular size (24-30 kDa) and in N-terminal sequences was identified in the cases of MMP-3, -7, -9, -13 and -20. The cleavage sites were located in the protease-sensitive hinge region between the trimerization and endostatin domains of NC1. MMP-1, -2, -8 and -12 did not show any significant activity against the C-terminus of collagen XVIII. The anti-proliferative effect of the 20-kDa endostatin, three longer endostatin-containing fragments generated in vitro by distinct MMPs and the entire NC1 domain, on bFGF-stimulated human umbilical vein endothelial cells was established. The anti-migratory potential of some of these fragments was also studied. In addition, production of endostatin fragments between 24-30 kDa by human hepatoblastoma cells was shown to be due to MMP action on type XVIII collagen. Our results indicate that certain, especially cancer-related, MMP family members can generate biologically active endostatin-containing polypeptides from collagen XVIII and thus, by releasing endostatin fragments, may participate in the inhibition of endothelial cell proliferation, migration and angiogenesis

String fragmentation; La fragmentation des cordes

Energy Technology Data Exchange (ETDEWEB)

Drescher, H.J.; Werner, K. [Laboratoire de Physique Subatomique et des Technologies Associees - SUBATECH, Centre National de la Recherche Scientifique, 44 - Nantes (France)

1997-10-01

The classical string model is used in VENUS as a fragmentation model. For the soft domain simple 2-parton strings were sufficient, whereas for higher energies up to LHC, the perturbative regime of the QCD gives additional soft gluons, which are mapped on the string as so called kinks, energy singularities between the leading partons. The kinky string model is chosen to handle fragmentation of these strings by application of the Lorentz invariant area law. The `kinky strings` model, corresponding to the perturbative gluons coming from pQCD, takes into consideration this effect by treating the partons and gluons on the same footing. The decay law is always the Artru-Menessier area law which is the most realistic since it is invariant to the Lorentz and gauge transformations. For low mass strings a manipulation of the rupture point is necessary if the string corresponds already to an elementary particle determined by the mass and the flavor content. By means of the fragmentation model it will be possible to simulate the data from future experiments at LHC and RHIC 3 refs.

Using UAS optical imagery and SfM photogrammetry to characterize the surface grain size of gravel bars in a braided river (Vénéon River, French Alps)

Science.gov (United States)

Vázquez-Tarrío, Daniel; Borgniet, Laurent; Liébault, Frédéric; Recking, Alain

2017-05-01

This paper explores the potential of unmanned aerial system (UAS) optical aerial imagery to characterize grain roughness and size distribution in a braided, gravel-bed river (Vénéon River, French Alps). With this aim in view, a Wolman field campaign (19 samples) and five UAS surveys were conducted over the Vénéon braided channel during summer 2015. The UAS consisted of a small quadcopter carrying a GoPro camera. Structure-from-Motion (SfM) photogrammetry was used to extract dense and accurate three-dimensional point clouds. Roughness descriptors (roughness heights, standard deviation of elevation) were computed from the SfM point clouds and were correlated with the median grain size of the Wolman samples. A strong relationship was found between UAS-SfM-derived grain roughness and Wolman grain size. The procedure employed has potential for the rapid and continuous characterization of grain size distribution in exposed bars of gravel-bed rivers. The workflow described in this paper has been successfully used to produce spatially continuous grain size information on exposed gravel bars and to explore textural changes following flow events.

Creativity in Court-Connected Mediation: Myth or Reality?

DEFF Research Database (Denmark)

Adrian, Lin; Mykland, Solfrid

2014-01-01

In this study, we examined creativity in court-connected mediation. We analyzed 129 mediated agreements from civil cases in Norway and Denmark and compared the outcomes with the parties' original claims to determine whether the agreement addressed only the disputants' demands or contained other...... elements. If the mediated agreements contained elements in addition to the original claims, we considered them to be “creative.” We devised a creativity scale and found that approximately two thirds of the cases contained creative elements and one quarter of them contained more than five creative elements....... We then sought to determine which aspects of the mediation promoted creativity by looking at a variety of mediation characteristics (length of mediation, characteristics of the parties, etc.). We found that lengthier mediations tended to feature more creativity as did cases that involved two private...

3' fragment of miR173-programmed RISC-cleaved RNA is protected from degradation in a complex with RISC and SGS3.

Science.gov (United States)

Yoshikawa, Manabu; Iki, Taichiro; Tsutsui, Yasuhiro; Miyashita, Kyoko; Poethig, R Scott; Habu, Yoshiki; Ishikawa, Masayuki

2013-03-05

trans-acting small interfering RNAs (tasiRNAs) are plant-specific endogenous siRNAs produced via a unique pathway whose first step is the microRNA (miRNA)-programmed RNA-induced silencing complex (RISC)-mediated cleavage of tasiRNA gene (TAS) transcripts. One of the products is subsequently transformed into tasiRNAs by a pathway that requires several factors including SUPPRESSOR OF GENE SILENCING3 (SGS3) and RNA-DEPENDENT RNA POLYMERASE6. Here, using in vitro assembled ARGONAUTE (AGO)1-RISCs, we show that SGS3 is recruited onto RISCs only when they bind target RNA. Following cleavage by miRNA173 (miR173)-programmed RISC, SGS3 was found in complexes containing cleaved TAS2 RNA and RISC. The 3' cleavage fragment (the source of tasiRNAs) was protected from degradation in this complex. Depletion of SGS3 did not affect TAS2 RNA cleavage by miR173-programmed RISC, but did affect the stability of the 3' cleavage fragment. When the 3' nucleotide of 22-nt miR173 was deleted or the corresponding nucleotide in TAS2 RNA was mutated, the complex was not observed and the 3' cleavage fragment was degraded. Importantly, these changes in miR173 or TAS2 RNA are known to lead to a loss of tasiRNA production in vivo. These results suggest that (i) SGS3 associates with AGO1-RISC via the double-stranded RNA formed by the 3'-terminal nucleotides of 22-nt miR173 and corresponding target RNA, which probably protrudes from the AGO1-RISC molecular surface, (ii) SGS3 protects the 3' cleavage fragment of TAS2 RNA from degradation, and (iii) the observed SGS3-dependent stabilization of the 3' fragment of TAS2 RNA is key to tasiRNA production.

Two novel WD40 domain–containing proteins, Ere1 and Ere2, function in the retromer-mediated endosomal recycling pathway

Science.gov (United States)

Shi, Yufeng; Stefan, Christopher J.; Rue, Sarah M.; Teis, David; Emr, Scott D.

2011-01-01

Regulated secretion, nutrient uptake, and responses to extracellular signals depend on cell-surface proteins that are internalized and recycled back to the plasma membrane. However, the underlying mechanisms that govern membrane protein recycling to the cell surface are not fully known. Using a chemical-genetic screen in yeast, we show that the arginine transporter Can1 is recycled back to the cell surface via two independent pathways mediated by the sorting nexins Snx4/41/42 and the retromer complex, respectively. In addition, we identify two novel WD40-domain endosomal recycling proteins, Ere1 and Ere2, that function in the retromer pathway. Ere1 is required for Can1 recycling via the retromer-mediated pathway, but it is not required for the transport of other retromer cargoes, such as Vps10 and Ftr1. Biochemical studies reveal that Ere1 physically interacts with internalized Can1. Ere2 is present in a complex containing Ere1 on endosomes and functions as a regulator of Ere1. Taken together, our results suggest that Snx4/41/42 and the retromer comprise two independent pathways for the recycling of internalized cell-surface proteins. Moreover, a complex containing the two novel proteins Ere1 and Ere2 mediates cargo-specific recognition by the retromer pathway. PMID:21880895

Electron-mediating Cu(A) centers in proteins

DEFF Research Database (Denmark)

Epel, Boris; Slutter, Claire S; Neese, Frank

2002-01-01

High field (W-band, 95 GHz) pulsed electron-nuclear double resonance (ENDOR) measurements were carried out on a number of proteins that contain the mixed-valence, binuclear electron-mediating Cu(A) center. These include nitrous oxide reductase (N(2)OR), the recombinant water-soluble fragment...... of subunit II of Thermus thermophilus cytochrome c oxidase (COX) ba(3) (M160T9), its M160QT0 mutant, where the weak axial methionine ligand has been replaced by a glutamine, and the engineered "purple" azurin (purpAz). The three-dimensional (3-D) structures of these proteins, apart from the mutant, are known...... indicates differences in the positions of the imidazole rings relative to the Cu(2)S(2) core. Comparison of the spectral features of the weakly coupled protons of M160QT0 with those of the other investigated proteins shows that they are very similar to those of purpAz, where the Cu(A) center is the most...

Affleck-Dine baryogenesis, condensate fragmentation and gravitino dark matter in gauge-mediation with a large messenger mass

International Nuclear Information System (INIS)

Doddato, Francesca; McDonald, John

2011-01-01

We study the conditions for successful Affleck-Dine baryogenesis and the origin of gravitino dark matter in GMSB models. AD baryogenesis in GMSB models is ruled out by neutron star stability unless Q-balls are unstable and decay before nucleosynthesis. Unstable Q-balls can form if the messenger mass scale is larger than the flat-direction field Φ when the condensate fragments. We provide an example based on AD baryogenesis along a d = 6 flat direction for the case where m 3/2 ≈ 2GeV, as predicted by gravitino dark matter from Q-ball decay. Using a phenomenological GMSB potential which models the Φ dependence of the SUSY breaking terms, we numerically solve for the evolution of Φ and show that the messenger mass can be sufficiently close to the flat-direction field when the condensate fragments. We compute the corresponding reheating temperature and the baryonic charge of the condensate fragments and show that the charge is large enough to produce late-decaying Q-balls which can be the origin of gravitino dark matter

Many-body physics in two-component Bose–Einstein condensates in a cavity: fragmented superradiance and polarization

Science.gov (United States)

Lode, Axel U. J.; Diorico, Fritz S.; Wu, RuGway; Molignini, Paolo; Papariello, Luca; Lin, Rui; Lévêque, Camille; Exl, Lukas; Tsatsos, Marios C.; Chitra, R.; Mauser, Norbert J.

2018-05-01

We consider laser-pumped one-dimensional two-component bosons in a parabolic trap embedded in a high-finesse optical cavity. Above a threshold pump power, the photons that populate the cavity modify the effective atom trap and mediate a coupling between the two components of the Bose–Einstein condensate. We calculate the ground state of the laser-pumped system and find different stages of self-organization depending on the power of the laser. The modified potential and the laser-mediated coupling between the atomic components give rise to rich many-body physics: an increase of the pump power triggers a self-organization of the atoms while an even larger pump power causes correlations between the self-organized atoms—the BEC becomes fragmented and the reduced density matrix acquires multiple macroscopic eigenvalues. In this fragmented superradiant state, the atoms can no longer be described as two-level systems and the mapping of the system to the Dicke model breaks down.

Fission fragment angular momentum

International Nuclear Information System (INIS)

Frenne, D. De

1991-01-01

Most of the energy released in fission is converted into translational kinetic energy of the fragments. The remaining excitation energy will be distributed among neutrons and gammas. An important parameter characterizing the scission configuration is the primary angular momentum of the nascent fragments. Neutron emission is not expected to decrease the spin of the fragments by more than one unit of angular momentum and is as such of less importance in the determination of the initial fragment spins. Gamma emission is a suitable tool in studying initial fragment spins because the emission time, number, energy, and multipolarity of the gammas strongly depend on the value of the primary angular momentum. The main conclusions of experiments on gamma emission were that the initial angular momentum of the fragments is large compared to the ground state spin and oriented perpendicular to the fission axis. Most of the recent information concerning initial fragment spin distributions comes from the measurement of isomeric ratios for isomeric pairs produced in fission. Although in nearly every mass chain isomers are known, only a small number are suitable for initial fission fragment spin studies. Yield and half-life considerations strongly limit the number of candidates. This has the advantage that the behavior of a specific isomeric pair can be investigated for a number of fissioning systems at different excitation energies of the fragments and fissioning nuclei. Because most of the recent information on primary angular momenta comes from measurements of isomeric ratios, the global deexcitation process of the fragments and the calculation of the initial fragment spin distribution from measured isomeric ratios are discussed here. The most important results on primary angular momentum determinations are reviewed and some theoretical approaches are given. 45 refs., 7 figs., 2 tabs

Nebulized Anti-IL-13 Monoclonal Antibody Fab' Fragment Reduces Allergen-Induced Asthma

OpenAIRE

Hacha, Jonathan; Tomlinson, K; Maertens, Ludovic; Paulissen, Geneviève; Rocks, Natacha; Foidart, Jean-Michel; Noël, Agnès; Palframan, R; Guéders, Maud; Cataldo, Didier

2012-01-01

Rationale: Interleukin-13 (IL-13) is a prototypic Th2 cytokine and a central mediator of the complex cascade of events leading to asthmatic phenotype. Indeed, IL-13 plays key roles in IgE synthesis, bronchial hyperresponsiveness, mucus hypersecretion, subepithelial fibrosis and eosinophil infiltration. Objectives: We assessed the potential efficacy of inhaled anti-IL-13 monoclonal antibody Fab' fragment on allergen-induced airway inflammation, hyperresponsiveness and remodeling in an experime...

Experimental resin cements containing bioactive fillers reduce matrix metalloproteinase-mediated dentin collagen degradation.

Science.gov (United States)

Osorio, Raquel; Yamauti, Monica; Sauro, Salvatore; Watson, Thimoty F; Toledano, Manuel

2012-09-01

Collagen dentin matrix may represent a suitable scaffold to be remineralized in the presence of bioactive materials. The purpose of this study was to determine if experimental resin cements containing bioactive fillers may modulate matrix metalloproteinase-mediated collagen degradation of etched dentin. Human dentin beams demineralized using 10% phosphoric acid or 0.5 mol/L EDTA were infiltrated with the following experimental resins: (1) unfilled resin, (2) resin with Bioglass 45S5 particles (Sylc; OSspray Ltd, London, UK), and (3) resin with β-tricalcium phosphate-modified calcium silicate cement (HCAT-β) particles. The filler/resin ratio was 40/60 wt%. The specimens were stored in artificial saliva, and the determination of C-terminal telopeptide (ICTP) was performed by radioimmunoassay after 24 hours, 1 week, and 4 weeks. Scanning electron microscopic analysis of dentin surfaces after 4 weeks of storage was also executed. Collagen degradation was prominent both in phosphoric acid and EDTA-treated dentin. Resin infiltration strongly reduced the MMP activity in demineralized dentin. Resin-containing Bioglass 45S5 particles exerted higher and more stable protection of collagen at all tested dentin states and time points. HCAT-β induced collagen protection from MMPs only in EDTA-treated specimens. Dentin remineralization was achieved when dentin was infiltrated with the resin cements containing bioactive fillers. MMP degradation of dentin collagen is strongly reduced in resin-infiltrated dentin. The inclusion of Bioglass 45S5 particles exerted an additional protection of collagen during dentin remineralization. Copyright © 2012 American Association of Endodontists. Published by Elsevier Inc. All rights reserved.

UAS-SfM for coastal research: Geomorphic feature extraction and land cover classification from high-resolution elevation and optical imagery

Science.gov (United States)

Sturdivant, Emily; Lentz, Erika; Thieler, E. Robert; Farris, Amy; Weber, Kathryn; Remsen, David P.; Miner, Simon; Henderson, Rachel

2017-01-01

The vulnerability of coastal systems to hazards such as storms and sea-level rise is typically characterized using a combination of ground and manned airborne systems that have limited spatial or temporal scales. Structure-from-motion (SfM) photogrammetry applied to imagery acquired by unmanned aerial systems (UAS) offers a rapid and inexpensive means to produce high-resolution topographic and visual reflectance datasets that rival existing lidar and imagery standards. Here, we use SfM to produce an elevation point cloud, an orthomosaic, and a digital elevation model (DEM) from data collected by UAS at a beach and wetland site in Massachusetts, USA. We apply existing methods to (a) determine the position of shorelines and foredunes using a feature extraction routine developed for lidar point clouds and (b) map land cover from the rasterized surfaces using a supervised classification routine. In both analyses, we experimentally vary the input datasets to understand the benefits and limitations of UAS-SfM for coastal vulnerability assessment. We find that (a) geomorphic features are extracted from the SfM point cloud with near-continuous coverage and sub-meter precision, better than was possible from a recent lidar dataset covering the same area; and (b) land cover classification is greatly improved by including topographic data with visual reflectance, but changes to resolution (when <50 cm) have little influence on the classification accuracy.

UAS-SfM for Coastal Research: Geomorphic Feature Extraction and Land Cover Classification from High-Resolution Elevation and Optical Imagery

Directory of Open Access Journals (Sweden)

Emily J. Sturdivant

2017-10-01

Full Text Available The vulnerability of coastal systems to hazards such as storms and sea-level rise is typically characterized using a combination of ground and manned airborne systems that have limited spatial or temporal scales. Structure-from-motion (SfM photogrammetry applied to imagery acquired by unmanned aerial systems (UAS offers a rapid and inexpensive means to produce high-resolution topographic and visual reflectance datasets that rival existing lidar and imagery standards. Here, we use SfM to produce an elevation point cloud, an orthomosaic, and a digital elevation model (DEM from data collected by UAS at a beach and wetland site in Massachusetts, USA. We apply existing methods to (a determine the position of shorelines and foredunes using a feature extraction routine developed for lidar point clouds and (b map land cover from the rasterized surfaces using a supervised classification routine. In both analyses, we experimentally vary the input datasets to understand the benefits and limitations of UAS-SfM for coastal vulnerability assessment. We find that (a geomorphic features are extracted from the SfM point cloud with near-continuous coverage and sub-meter precision, better than was possible from a recent lidar dataset covering the same area; and (b land cover classification is greatly improved by including topographic data with visual reflectance, but changes to resolution (when <50 cm have little influence on the classification accuracy.

A recombinant, fully human monoclonal antibody with antitumor activity constructed from phage-displayed antibody fragments

NARCIS (Netherlands)

Huls, GA; Heijnen, IAFM; Cuomo, ME; Koningsberger, JC; Boel, E; de Vries, ARV; Loyson, SAJ; Helfrich, W; Henegouwen, GPV; van Meijer, M; de Kruif, J; Logtenberg, T

A single-chain Fv antibody fragment specific for the tumor-associated Ep-CAM molecule was isolated from a semisynthetic phage display library and converted into an intact, fully human IgG1 monoclonal antibody (huMab), The purified huMab had an affinity of 5 nM and effectively mediated tumor cell

Azimuthal Anisotropies in Nuclear Fragmentation

International Nuclear Information System (INIS)

Dabrowska, A.; Szarska, M.; Trzupek, A.; Wolter, W.; Wosiek, B.

2002-01-01

The directed and elliptic flow of fragments emitted from the excited projectile nuclei has been observed for 158 AGeV Pb collisions with the lead and plastic targets. For comparison the flow analysis has been performed for 10.6 AGeV Au collisions with the emulsion target. The strong directed flow of heaviest fragments is found. Light fragments exhibit directed flow opposite to that of heavy fragments. The elliptic flow for all multiply charged fragments is positive and increases with the charge of the fragment. The observed flow patterns in the fragmentation of the projectile nucleus are practically independent of the mass of the target nucleus and the collision energy. Emission of fragments in nuclear multifragmentation shows similar, although weaker, flow effects. (author)

C2 Link Security for UAS: Technical Literature Study and Preliminary Functional Requirements. Version 0.9 (Working Draft)

Science.gov (United States)

2005-01-01

This document provides a study of the technical literature related to Command and Control (C2) link security for Unmanned Aircraft Systems (UAS) for operation in the National Airspace System (NAS). Included is a preliminary set of functional requirements for C2 link security.

Fluxgate Magnetometer system mounted on UAS system: First field test at Dominga IOCG deposit, Chile

Science.gov (United States)

Yanez, G. A.; Banchero, L.; Marco, A.; Figueroa, R.

2016-12-01

With the support of Fundacion Chile (FCH) grant, we developed an airborne magnetic system (GeoMagDrone GFDAS) mounted on a UAS octodrone platform (DJI, S1000), based on a low cost/light-weight fluxgate magnetometer (FGM-301) and a robust/light-weight data logger for position, temperature, radar altimeter and 3 magnetic components at 16 Hz recording. Fluxgate magnetometer is hanging from the UAS platform at a distance of 2.5m where the EM noise is reduced to less than 2 nT. The whole geophysical system, including batteries, weights 650 gr., with an autonomy of 2 hours. Magnetometer calibration includes the 9 coefficients of amplitude, offset, and orthogonality, and temperature correction. We test the system over the IOCG deposit of Dominga-Chile, a magnetite ore (40%) (a block of 2x3 km with NS lines separated every 50m and a clearance of 40m, the mineral deposit buried 50-100m from the surface, where a ground magnetic survey was conducted previously. Ground conditions includes relatively rough topography with slopes of 10-20%, and some windy days. We use the digital terrain model SRTM30 to define the drape flight shape Average flight performance includes a mean speed of 35-40 km/hour, and an UAS battery consumption of 18-12 minutes depending on the wind conditions. A good correspondence was found between plan deployment and survey results in terms of line direction/separation/clearance. Line path were flown with errors less than 5 meters, whereas clearance of 40m was kept depending on the amount of control points used. The comparison between ground survey and GeoMagDrone results show a perfect match (anomaly amplitude/shape and noise envelope), validating in this way the system developed. Main concern for the productive application of this technology in unmanned geophysical platforms is the battery performance and the quality of digital terrain models to follow the topography.

Analysis of fission-fragment mass distribution within the quantum-mechanical fragmentation theory

Energy Technology Data Exchange (ETDEWEB)

Singh, Pardeep; Kaur, Harjeet [Guru Nanak Dev University, Department of Physics, Amritsar (India)

2016-11-15

The fission-fragment mass distribution is analysed for the {sup 208}Pb({sup 18}O, f) reaction within the quantum-mechanical fragmentation theory (QMFT). The reaction potential has been calculated by taking the binding energies, Coulomb potential and proximity potential of all possible decay channels and a stationary Schroedinger equation has been solved numerically to calculate the fission-fragment yield. The overall results for mass distribution are compared with those obtained in experiment. Fine structure dips in yield, corresponding to fragment shell closures at Z = 50 and N=82, which are observed by Bogachev et al., are reproduced successfully in the present calculations. These calculations will help to estimate the formation probabilities of fission fragments and to understand many related phenomena occurring in the fission process. (orig.)

Insulin-induced activation of glycerol-3-phosphate acyltransferase by a chiro-inositol-containing insulin mediator is defective in adipocytes of insulin-resistant, type II diabetic, Goto-Kakizaki rats.

Science.gov (United States)

Farese, R V; Standaert, M L; Yamada, K; Huang, L C; Zhang, C; Cooper, D R; Wang, Z; Yang, Y; Suzuki, S; Toyota, T

1994-11-08

Type II diabetic Goto-Kakizaki (GK) rats were insulin-resistant in euglycemic-hyperinsulinemic clamp studies. We therefore examined insulin signaling systems in control Wistar and diabetic GK rats. Glycerol-3-phosphate acyltransferase (G3PAT), which is activated by headgroup mediators released from glycosyl-phosphatidylinositol (GPI), was activated by insulin in intact and cell-free adipocyte preparations of control, but not diabetic, rats. A specific chiro-inositol-containing inositol phosphoglycan (IPG) mediator, prepared from beef liver, bypassed this defect and comparably activated G3PAT in cell-free adipocyte preparations of both diabetic GK and control rats. A myo-inositol-containing IPG mediator did not activate G3PAT. Relative to control adipocytes, labeling of GPI by [3H]glucosamine was diminished by 50% and insulin failed to stimulate GPI hydrolysis in GK adipocytes. In contrast to GPI-dependent G3PAT activation, insulin-stimulated hexose transport was intact in adipocytes and soleus and gastrocnemius muscles of the GK rat, as was insulin-induced activation of mitogen-activated protein kinase and protein kinase C. We conclude that (i) chiro-inositol-containing IPG mediator activates G3PAT during insulin action, (ii) diabetic GK rats have a defect in synthesizing or releasing functional chiro-inositol-containing IPG, and (iii) defective IPG-regulated intracellular glucose metabolism contributes importantly to insulin resistance in diabetic GK rats.

Truncated borrelidin analogues: synthesis by sequential cross metathesis/olefination for the southern fragment and biological evaluation.

Science.gov (United States)

Gündemir-Durmaz, Tülay; Schmid, Fabian; El Baz, Yana; Häusser, Annette; Schneider, Carmen; Bilitewski, Ursula; Rauhut, Guntram; Garnier, Delphine; Baro, Angelika; Laschat, Sabine

2016-09-21

The construction of novel borrelidin analogues is reported in which the northern fragment is truncated to a simple hydroxyundecanecarboxylate and the original cyclopentanecarboxylic acid in the southern fragment is replaced with different six-membered rings. The required precursors were prepared by cross metathesis of the appropriate carbocycle-based homoallylic alcohol with crotonaldehyde followed by HWE olefination of the resulting enal with bromocyanophosphonate. The key aldehyde for intramolecular cross coupling was accessible by oxidation of the hydroxy group of the linked undecanecarboxylate unit. Grignard mediated macrocyclization finally yielded the borrelidin related products. The investigation is complemented by SAR studies and quantum-chemical calculations.

Factors influencing Agrobacterium-mediated embryogenic callus transformation of Valencia sweet orange (Citrus sinensis) containing the pTA29-barnase gene.

Science.gov (United States)

Li, D D; Shi, W; Deng, X X

2003-12-01

Valencia sweet orange (Citrus sinensis (L.) Osbeck) calluses were used as explants to develop a new transformation system for citrus mediated by Agrobacterium tumefaciens. Factors affecting Agrobacterium-mediated transformation efficiency included mode of pre-cultivation, temperature of cocultivation and presence of acetosyringone (AS). The highest transformation efficiency was obtained with a 4-day pre-cultivation period in liquid medium. Transformation efficiency was higher when cocultivation was performed for 3 days at 19 degrees C than at 23 or 28 degrees C. Almost no resistant callus was obtained if the cocultivation medium lacked AS. The transformation procedure yielded transgenic Valencia plants containing the pTA29-barnase gene, as verified by PCR amplification and confirmed by Southern blotting. Because male sterility is a common factor leading to seedlessness in citrus cultivars with parthenocarpic characteristics, production of seedless citrus genotypes by Agrobacterium-mediated genetic transformation is a promising alternative to conventional breeding methods.

Precise determination of W anfd Z masses in UA2

International Nuclear Information System (INIS)

Lefebvre, M.

1990-01-01

The UA2 experiment has collected large samples of W and Z events during the 1988 and 1989 runs at the CERN antipp Collider at √s = 630 GeV. These samples have been used to perform precise measurements of the masses of the W and Z bosons. After a careful analysis of systematic errors, an improved result is obtained for the mass ratio M W /M Z . This provides a new value for the weak mixing parameter sin 2 θ W . Furthermore, it can be combined with recent measurements of the Z mass from e + e - colliders to give an absolute measurement of the W mass, leading to the result m W = 80.49 ± 0.43(stat) ± 0.24(syst) GeV

Fragment Screening of Human Kynurenine Aminotransferase-II.

Science.gov (United States)

Jayawickrama, Gayan S; Nematollahi, Alireza; Sun, Guanchen; Church, W Bret

2018-03-01

Kynurenine aminotransferase-II (KAT-II) is a pyridoxal 5'-phosphate (PLP)-dependent enzyme that acts in the tryptophan metabolic pathway by catalyzing the transamination of kynurenine into kynurenic acid (KYNA). It is one of four isoforms in the KAT family, of which it is the primary homologue responsible for KYNA production in the mammalian brain. KAT-II is targeted for inhibition as KYNA is implicated in diseases such as schizophrenia, where it is found in elevated concentrations. Previously, many different approaches have been taken to develop KAT-II inhibitors, and herein fragment-based drug design (FBDD) approaches have been exploited to provide further lead compounds that can be designed into novel inhibitors. Surface plasmon resonance (SPR) was used to screen a fragment library containing 1000 compounds, of which 41 hits were identified. These hits were further evaluated with SPR, and 18 were selected for inhibition studies. From these hits, two fragments, F6037-0164 and F0037-7280, were pursued and determined to have an IC 50 of 524.5 (± 25.6) μM and 115.2 (± 4.5) μM, respectively. This strategy shows the viability of using FBDD in gleaning knowledge about KAT-II inhibition and generating leads for the production of KAT-II inhibitors.

Integrated delivery systems: the cure for fragmentation.

Science.gov (United States)

Enthoven, Alain C

2009-12-01

Our healthcare system is fragmented, with a misalignment of incentives, or lack of coordination, that spawns inefficient allocation of resources. Fragmentation adversely impacts quality, cost, and outcomes. Eliminating waste from unnecessary, unsafe care is crucial for improving quality and reducing costs--and making the system financially sustainable. Many believe this can be achieved through greater integration of healthcare delivery, more specifically via integrated delivery systems (IDSs). An IDS is an organized, coordinated, and collaborative network that links various healthcare providers to provide a coordinated, vertical continuum of services to a particular patient population or community. It is also accountable, both clinically and fiscally, for the clinical outcomes and health status of the population or community served, and has systems in place to manage and improve them. The marketplace already contains numerous styles and degrees of integration, ranging from Kaiser Permanente-style full integration, to more loosely organized individual practice associations, to public-private partnerships. Evidence suggests that IDSs can improve healthcare quality, improve outcomes, and reduce costs--especially for patients with complex needs--if properly implemented and coordinated. No single approach or public policy will fix the fragmented healthcare system, but IDSs represent an important step in the right direction.

Hypervelocity Impact Test Fragment Modeling: Modifications to the Fragment Rotation Analysis and Lightcurve Code

Science.gov (United States)

Gouge, Michael F.

2011-01-01

Hypervelocity impact tests on test satellites are performed by members of the orbital debris scientific community in order to understand and typify the on-orbit collision breakup process. By analysis of these test satellite fragments, the fragment size and mass distributions are derived and incorporated into various orbital debris models. These same fragments are currently being put to new use using emerging technologies. Digital models of these fragments are created using a laser scanner. A group of computer programs referred to as the Fragment Rotation Analysis and Lightcurve code uses these digital representations in a multitude of ways that describe, measure, and model on-orbit fragments and fragment behavior. The Dynamic Rotation subroutine generates all of the possible reflected intensities from a scanned fragment as if it were observed to rotate dynamically while in orbit about the Earth. This calls an additional subroutine that graphically displays the intensities and the resulting frequency of those intensities as a range of solar phase angles in a Probability Density Function plot. This document reports the additions and modifications to the subset of the Fragment Rotation Analysis and Lightcurve concerned with the Dynamic Rotation and Probability Density Function plotting subroutines.

The vertex detector of the UA2 experiment (a low mass self sustaining system of cylindrical multiwire proportional chambers)

International Nuclear Information System (INIS)

Dialinas, M.; Forget, J.; Geoffroy, D.; Jean, P.; Vergand, M.

1983-07-01

The construction of the cylindrical proportional strip chambers of the UA2 vertex detector is reported. The mechanical design, the engineering and the effective realization are described in detail. Possible improvements for the construction of such chambers are also given

A role of periaqueductal grey NR2B-containing NMDA receptor in mediating persistent inflammatory pain

Directory of Open Access Journals (Sweden)

Yang Qi

2009-12-01

Full Text Available Abstract The midbrain periaqueductal grey (PAG is a structure known for its roles in pain transmission and modulation. Noxious stimuli potentiate the glutamate synaptic transmission and enhance glutamate NMDA receptor expression in the PAG. However, little is known about roles of NMDA receptor subunits in the PAG in processing the persistent inflammatory pain. The present study was undertaken to investigate NR2A- and NR2B-containing NMDA receptors in the PAG and their modulation to the peripheral painful inflammation. Noxious stimuli induced by hind-paw injection of complete Freund's adjuvant (CFA caused up-regulation of NR2B-containing NMDA receptors in the PAG, while NR2A-containing NMDA receptors were not altered. Whole-cell patch-clamp recordings revealed that NMDA receptor mediated mEPSCs were increased significantly in the PAG synapse during the chronic phases of inflammatory pain in mice. PAG local infusion of Ro 25-6981, an NR2B antagonist, notably prolonged the paw withdrawal latency to thermal radian heat stimuli bilaterally in rats. Hyperoside (Hyp, one of the flavonoids compound isolated from Rhododendron ponticum L., significantly reversed up-regulation of NR2B-containing NMDA receptors in the PAG and exhibited analgesic activities against persistent inflammatory stimuli in mice. Our findings provide strong evidence that up-regulation of NR2B-containing NMDA receptors in the PAG involves in the modulation to the peripheral persistent inflammatory pain.

Morphometric analysis of chameleon fossil fragments from the Early Pliocene of South Africa: a new piece of the chamaeleonid history.

Science.gov (United States)

Dollion, Alexis Y; Cornette, Raphaël; Tolley, Krystal A; Boistel, Renaud; Euriat, Adelaïde; Boller, Elodie; Fernandez, Vincent; Stynder, Deano; Herrel, Anthony

2015-02-01

The evolutionary history of chameleons has been predominantly studied through phylogenetic approaches as the fossil register of chameleons is limited and fragmented. The poor state of preservation of these fossils has moreover led to the origin of numerous nomen dubia, and the identification of many chameleon fossils remains uncertain. We here examine chameleon fossil fragments from the Early Pliocene Varswater formation, exposed at the locality of Langebaanweg "E" Quarry along the southwestern coast of South Africa. Our aim was to explore whether these fossil fragments could be assigned to extant genera. To do so, we used geometric morphometric approaches based on microtomographic imaging of extant chameleons as well as the fossil fragments themselves. Our study suggests that the fossils from this deposit most likely represent at least two different forms that may belong to different genera. Most fragments are phenotypically dissimilar from the South African endemic genus Bradypodion and are more similar to other chameleon genera such as Trioceros or Kinyongia. However, close phenetic similarities between some of the fragments and the Seychelles endemic Archaius or the Madagascan genus Furcifer suggest that some of these fragments may not contain enough genus-specific information to allow correct identification. Other fragments such as the parietal fragments appear to contain more genus-specific information, however. Although our data suggest that the fossil diversity of chameleons in South Africa was potentially greater than it is today, this remains to be verified based on other and more complete fragments.

Domino-Like Intercellular Delivery of Undecylenic Acid-Conjugated Porous Silicon Nanoparticles for Deep Tumor Penetration.

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Yong, Tuying; Hu, Jun; Zhang, Xiaoqiong; Li, Fuying; Yang, Hao; Gan, Lu; Yang, Xiangliang

2016-10-05

Improving the intratumoral distribution of anticancer agents remains the critical challenge for developing efficient cancer chemotherapy. Luminescent porous silicon nanoparticles (PSiNPs) have attracted considerable attention in the biomedical field especially in drug delivery. Here, we described the lysosomal exocytosis-mediated domino-like intercellular delivery of undecylenic acid-conjugated PSiNPs (UA-PSiNPs) for deep tumor penetration. UA-PSiNPs with significantly improved stability in physiological conditions were internalized into tumor cells by macropinocytosis-, caveolae-, and clathrin-mediated endocytosis and mainly colocalized with Golgi apparatus and lysosomes. Substantial evidence showed that UA-PSiNPs was excreted from cells via lysosomal exocytosis after cellular uptake. The exocytosed UA-PSiNPs induced a domino-like infection of adjacent cancer cells and allowed encapsulated doxorubicin (DOX) to deeply penetrate into both three-dimensional tumor spheroids and in vivo tumors. In addition, DOX-loaded UA-PSiNPs exhibited strong antitumor activity and few side effects in vivo. This study demonstrated that UA-PSiNPs as a drug carrier might be applied for deep tumor penetration, offering a new insight into the design of more efficient delivery systems of anticancer drugs.

Magmatic and fragmentation controls on volcanic ash surface chemistry

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Ayris, Paul M.; Diplas, Spyros; Damby, David E.; Hornby, Adrian J.; Cimarelli, Corrado; Delmelle, Pierre; Scheu, Bettina; Dingwell, Donald B.

2016-04-01

The chemical effects of silicate ash ejected by explosive volcanic eruptions on environmental systems are fundamentally mediated by ash particle surfaces. Ash surfaces are a composite product of magmatic properties and fragmentation mechanisms, as well as in-plume and atmospheric alteration processes acting upon those surfaces during and after the eruption. Recent attention has focused on the capacity of alteration processes to shape ash surfaces; most notably, several studies have utilised X-ray photoelectron spectroscopy (XPS), a technique probing the elemental composition and coordination state of atoms within the top 10 nm of ash surfaces, to identify patterns of elemental depletions and enrichments relative to bulk ash chemical composition. Under the presumption of surface and bulk equivalence, any disparities have been previously attributed to surface alteration processes, but the ubiquity of some depletions (e.g., Ca, Fe) across multiple ash studies, irrespective of eruptive origin, could suggest these to be features of the surface produced at the instant of magma fragmentation. To investigate this possibility further, we conducted rapid decompression experiments at different pressure conditions and at ambient and magmatic temperature on porous andesitic rocks. These experiments produced fragmented ash material untouched by secondary alteration, which were compared to particles produced by crushing of large clasts from the same experiments. We investigated a restricted size fraction (63-90 μm) from both fragmented and crushed materials, determining bulk chemistry and mineralogy via XRF, SEM-BSE and EPMA, and investigated the chemical composition of the ash surface by XPS. Analyses suggest that fragmentation under experimental conditions partitioned a greater fraction of plagioclase-rich particles into the selected size fraction, relative to particles produced by crushing. Trends in surface chemical composition in fragmented and crushed particles mirror that

Photodegradable, Photoadaptable Hydrogels via Radical-Mediated Disulfide Fragmentation Reaction.

Science.gov (United States)

Fairbanks, Benjamin D; Singh, Samir P; Bowman, Christopher N; Anseth, Kristi S

2011-04-26

Various techniques have been adopted to impart a biological responsiveness to synthetic hydrogels for the delivery of therapeutic agents as well as the study and manipulation of biological processes and tissue development. Such techniques and materials include polyelectrolyte gels that swell and deswell with changes in pH, thermosensitive gels that contract at physiological temperatures, and peptide cross-linked hydrogels that degrade upon peptidolysis by cell-secreted enzymes. Herein we report a unique approach to photochemically deform and degrade disulfide cross-linked hydrogels, mitigating the challenges of light attenuation and low quantum yield, permitting the degradation of hydrogels up to 2 mm thick within 120 s at low light intensities (10 mW/cm(2) at 365 nm). Hydrogels were formed by the oxidation of thiol-functionalized 4-armed poly(ethylene glycol) macromolecules. These disulfide cross-linked hydrogels were then swollen in a lithium acylphosphinate photoinitiator solution. Upon exposure to light, photogenerated radicals initiate multiple fragmentation and disulfide exchange reactions, permitting and promoting photodeformation, photowelding, and photodegradation. This novel, but simple, approach to generate photoadaptable hydrogels portends the study of cellular response to mechanically and topographically dynamic substrates as well as novel encapsulations by the welding of solid substrates. The principles and techniques described herein hold implications for more than hydrogel materials but also for photoadaptable polymers more generally.

Exact Solutions of Fragmentation Equations with General Fragmentation Rates and Separable Particles Distribution Kernels

Directory of Open Access Journals (Sweden)

S. C. Oukouomi Noutchie

2014-01-01

Full Text Available We make use of Laplace transform techniques and the method of characteristics to solve fragmentation equations explicitly. Our result is a breakthrough in the analysis of pure fragmentation equations as this is the first instance where an exact solution is provided for the fragmentation evolution equation with general fragmentation rates. This paper is the key for resolving most of the open problems in fragmentation theory including “shattering” and the sudden appearance of infinitely many particles in some systems with initial finite particles number.

Land fragmentation and production diversification

NARCIS (Netherlands)

Ciaian, Pavel; Guri, Fatmir; Rajcaniova, Miroslava; Drabik, Dusan; Paloma, Sergio Gomez Y.

2018-01-01

We analyze the impact of land fragmentation on production diversification in rural Albania. Albania represents a particularly interesting case for studying land fragmentation as the fragmentation is a direct outcome of land reforms. The results indicate that land fragmentation is an important driver

Fragmentation processes in nuclear reactions

International Nuclear Information System (INIS)

Legrain, R.

1984-08-01

Projectile and nuclear fragmentation are defined and processes referred to are recalled. The two different aspects of fragmentation are considered but the emphasis is also put on heavy ion induced reactions. The preliminary results of an experiment performed at GANIL to study peripheral heavy ions induced reactions at intermediate energy are presented. The results of this experiment will illustrate the characteristics of projectile fragmentation and this will also give the opportunity to study projectile fragmentation in the transition region. Then nuclear fragmentation is considered which is associated with more central collisions in the case of heavy ion induced reactions. This aspect of fragmentation is also ilustrated with two heavy ion experiments in which fragments emitted at large angle have been observed

Bacterial natural transformation by highly fragmented and damaged DNA

DEFF Research Database (Denmark)

Overballe-Petersen, Søren; Harms, Klaus; Orlando, Ludovic Antoine Alexandre

2013-01-01

for microbes, but not as potential substrate for bacterial evolution. Here, we show that fragmented DNA molecules (≥20 bp) that additionally may contain abasic sites, cross-links, or miscoding lesions are acquired by the environmental bacterium Acinetobacter baylyi through natural transformation. With uptake......DNA molecules are continuously released through decomposition of organic matter and are ubiquitous in most environments. Such DNA becomes fragmented and damaged (often DNA is recognized as nutrient source...... of DNA from a 43,000-y-old woolly mammoth bone, we further demonstrate that such natural transformation events include ancient DNA molecules. We find that the DNA recombination is RecA recombinase independent and is directly linked to DNA replication. We show that the adjacent nucleotide variations...

Chronic sleep fragmentation during the sleep period induces hypothalamic endoplasmic reticulum stress and PTP1b-mediated leptin resistance in male mice.

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