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Sample records for time-lapse seismic velocity

  1. Pre-stack estimation of time-lapse seismic velocity changes : an example from the Sleipner CO2-sequestration project

    International Nuclear Information System (INIS)

    Ghaderi, A.; Landro, M.; Ghaderi, A.

    2005-01-01

    Carbon dioxide (CO 2 ) is being injected into a shallow sand formation at around a 1,000 metre depth at the Sleipner Field located in the North Sea. It is expected that the CO 2 injected in the bottom of the formation, will form a plume consisting of CO 2 accumulating in thin lenses during migration up through the reservoir. Several studies have been published using stacked seismic data from 1994, 1999, 2001 and 2002. A thorough analysis of post-stack seismic data from the Sleipner CO2-Sequestration Pilot Project was conducted. Interpretation of seismic data is usually done on post-stack data. For a given subsurface reflection point, seismic data are acquired for various incidence angles, typically 40 angles. These 40 seismic signals are stacked together in order to reduce noise. The term pre-stack refers to seismic data prior to this step. For hydrocarbon-related 4-dimensional seismic studies, travel time shift estimations have been used. This paper compared pre-stack and post-stack estimation of average velocity changes based on measured 4-dimensional travel time shifts. It is more practical to compare estimated velocity changes than the actual travel time changes, since the time shifts vary with offset for pre-stack time-lapse seismic analysis. It was concluded that the pre-stack method gives smaller velocity changes when estimated between two key horizons. Therefore, pre-stack travel time analysis in addition to conventional post-stack analysis is recommended. 6 refs., 12 figs

  2. Depth-dependence of time-lapse seismic velocity change detected by a joint interferometric analysis of vertical array data

    Science.gov (United States)

    Sawazaki, K.; Saito, T.; Ueno, T.; Shiomi, K.

    2015-12-01

    In this study, utilizing depth-sensitivity of interferometric waveforms recorded by co-located Hi-net and KiK-net sensors, we separate the responsible depth of seismic velocity change associated with the M6.3 earthquake occurred on November 22, 2014, in central Japan. The Hi-net station N.MKGH is located about 20 km northeast from the epicenter, where the seismometer is installed at the 150 m depth. At the same site, the KiK-net has two strong motion seismometers installed at the depths of 0 and 150 m. To estimate average velocity change around the N.MKGH station, we apply the stretching technique to auto-correlation function (ACF) of ambient noise recorded by the Hi-net sensor. To evaluate sensitivity of the Hi-net ACF to velocity change above and below the 150 m depth, we perform a numerical wave propagation simulation using 2-D FDM. To obtain velocity change above the 150 m depth, we measure response waveform from the depths of 150 m to 0 m by computing deconvolution function (DCF) of earthquake records obtained by the two KiK-net vertical array sensors. The background annual velocity variation is subtracted from the detected velocity change. From the KiK-net DCF records, the velocity reduction ratio above the 150 m depth is estimated to be 4.2 % and 3.1 % in the periods of 1-7 days and 7 days - 4 months after the mainshock, respectively. From the Hi-net ACF records, the velocity reduction ratio is estimated to be 2.2 % and 1.8 % in the same time periods, respectively. This difference in the estimated velocity reduction ratio is attributed to depth-dependence of the velocity change. By using the depth sensitivity obtained from the numerical simulation, we estimate the velocity reduction ratio below the 150 m depth to be lower than 1.0 % for both time periods. Thus the significant velocity reduction and recovery are observed above the 150 m depth only, which may be caused by strong ground motion of the mainshock and following healing in the shallow ground.

  3. Time-lapse refraction seismic tomography for the detection of ground ice degradation

    Directory of Open Access Journals (Sweden)

    C. Hilbich

    2010-07-01

    Full Text Available The ice content of the subsurface is a major factor controlling the natural hazard potential of permafrost degradation in alpine terrain. Monitoring of changes in ice content is therefore similarly important as temperature monitoring in mountain permafrost. Although electrical resistivity tomography monitoring (ERTM proved to be a valuable tool for the observation of ice degradation, results are often ambiguous or contaminated by inversion artefacts. In theory, the sensitivity of P-wave velocity of seismic waves to phase changes between unfrozen water and ice is similar to the sensitivity of electric resistivity. Provided that the general conditions (lithology, stratigraphy, state of weathering, pore space remain unchanged over the observation period, temporal changes in the observed travel times of repeated seismic measurements should indicate changes in the ice and water content within the pores and fractures of the subsurface material. In this paper, a time-lapse refraction seismic tomography (TLST approach is applied as an independent method to ERTM at two test sites in the Swiss Alps. The approach was tested and validated based on a the comparison of time-lapse seismograms and analysis of reproducibility of the seismic signal, b the analysis of time-lapse travel time curves with respect to shifts in travel times and changes in P-wave velocities, and c the comparison of inverted tomograms including the quantification of velocity changes. Results show a high potential of the TLST approach concerning the detection of altered subsurface conditions caused by freezing and thawing processes. For velocity changes on the order of 3000 m/s even an unambiguous identification of significant ice loss is possible.

  4. Time-lapse seismic waveform modelling and attribute analysis using hydromechanical models for a deep reservoir undergoing depletion

    Science.gov (United States)

    He, Y.-X.; Angus, D. A.; Blanchard, T. D.; Wang, G.-L.; Yuan, S.-Y.; Garcia, A.

    2016-04-01

    Extraction of fluids from subsurface reservoirs induces changes in pore pressure, leading not only to geomechanical changes, but also perturbations in seismic velocities and hence observable seismic attributes. Time-lapse seismic analysis can be used to estimate changes in subsurface hydromechanical properties and thus act as a monitoring tool for geological reservoirs. The ability to observe and quantify changes in fluid, stress and strain using seismic techniques has important implications for monitoring risk not only for petroleum applications but also for geological storage of CO2 and nuclear waste scenarios. In this paper, we integrate hydromechanical simulation results with rock physics models and full-waveform seismic modelling to assess time-lapse seismic attribute resolution for dynamic reservoir characterization and hydromechanical model calibration. The time-lapse seismic simulations use a dynamic elastic reservoir model based on a North Sea deep reservoir undergoing large pressure changes. The time-lapse seismic traveltime shifts and time strains calculated from the modelled and processed synthetic data sets (i.e. pre-stack and post-stack data) are in a reasonable agreement with the true earth models, indicating the feasibility of using 1-D strain rock physics transform and time-lapse seismic processing methodology. Estimated vertical traveltime shifts for the overburden and the majority of the reservoir are within ±1 ms of the true earth model values, indicating that the time-lapse technique is sufficiently accurate for predicting overburden velocity changes and hence geomechanical effects. Characterization of deeper structure below the overburden becomes less accurate, where more advanced time-lapse seismic processing and migration is needed to handle the complex geometry and strong lateral induced velocity changes. Nevertheless, both migrated full-offset pre-stack and near-offset post-stack data image the general features of both the overburden and

  5. Time-lapse seismic attribute analysis for a water-flooded reservoir

    International Nuclear Information System (INIS)

    Jin, Long; Sen, M K; Stoffa, P L; Seif, R K

    2008-01-01

    One of the goals of time-lapse seismic monitoring is the direct detection of the fluid front and two-phase contact area. However, several factors affect the quality of time-lapse seismic difference data and decrease detectability. One of these factors is random noise. In this paper, we propose five different methods aimed at improving the quality and detectability of noisy time-lapse seismic difference data. Common to these methods is the transform of the differences to a domain where the time-lapse signal and random noise are well separated. Our proposed methods include direct Fourier transform based spectral decomposition, bispectra, wavelet transform, singular value decomposition and hybrid methods. We also propose a method that combines multiple time-lapse difference data and gives a final difference which enhances the common part and attenuates the differences of the multiple difference images resulting in a better detectability than the original images. A synthetic time-lapse model is used to demonstrate the feasibility of our proposed methods

  6. Time-lapse seismic - repeatability versus usefulness and 2D versus 3D

    Science.gov (United States)

    Landro, M.

    2017-12-01

    Time-lapse seismic has developed rapidly over the past decades, especially for monitoring of oil and gas reservoirs and subsurface storage of CO2. I will review and discuss some of the critical enabling factors for the commercial success of this technology. It was early realized that how well we are able to repeat our seismic experiment is crucial. However, it is always a question of detectability versus repeatability. For marine seismic, there are several factors limiting the repeatability: Weather conditions, positioning of sources and receivers and so on. I will discuss recent improvements in both acquisition and processing methods over the last decade. It is well known that repeated 3D seismic data is the most accurate tool for reservoir monitoring purposes. However, several examples show that 2D seismic data may be used for monitoring purposes despite lower repeatability. I will use examples from an underground blow out in the North Sea, and repeated 2D seismic lines acquired before and after the Tohoku earthquake in 2011 to illustrate this. A major challenge when using repeated 2D seismic for subsurface monitoring purposes is the lack of 3D calibration points and significantly less amount of data. For marine seismic acquisition, feathering issues and crossline dip effects become more critical compared to 3D seismic acquisition. Furthermore, the uncertainties arising from a non-ideal 2D seismic acquisition are hard to assess, since the 3D subsurface geometry has not been mapped. One way to shed more light on this challenge is to use 3D time lapse seismic modeling testing various crossline dips or geometries. Other ways are to use alternative data sources, such as bathymetry, time lapse gravity or electromagnetic data. The end result for all time-lapse monitoring projects is an interpretation associated with uncertainties, and for the 2D case these uncertainties are often large. The purpose of this talk is to discuss how to reduces and control these

  7. Time-Lapse Monitoring of Subsurface Fluid Flow using Parsimonious Seismic Interferometry

    KAUST Repository

    Hanafy, Sherif; Li, Jing; Schuster, Gerard T.

    2017-01-01

    of parsimonious seismic interferometry with the time-lapse mentoring idea with field examples, where we were able to record 30 different data sets within a 2-hour period. The recorded data are then processed to generate 30 snapshots that shows the spread of water

  8. Latest time-lapse seismic data from Sleipner yield new insights into CO2 plume development

    NARCIS (Netherlands)

    Chadwick, R.A.; Noy, D.; Arts, R.; Eiken, O.

    2009-01-01

    Since its inception in 1996, the CO2 injection operation at Sleipner has been monitored by 3D time-lapse seismic surveys. Striking images of the CO2 plume have been obtained, showing a multi-tier feature of high reflectivity, interpreted as arising from a number of thin layers of CO2 trapped beneath

  9. Time-Lapse Monitoring of Subsurface Fluid Flow using Parsimonious Seismic Interferometry

    KAUST Repository

    Hanafy, Sherif

    2017-04-21

    A typical small-scale seismic survey (such as 240 shot gathers) takes at least 16 working hours to be completed, which is a major obstacle in case of time-lapse monitoring experiments. This is especially true if the subject that needs to be monitored is rapidly changing. In this work, we will discuss how to decrease the recording time from 16 working hours to less than one hour of recording. Here, the virtual data has the same accuracy as the conventional data. We validate the efficacy of parsimonious seismic interferometry with the time-lapse mentoring idea with field examples, where we were able to record 30 different data sets within a 2-hour period. The recorded data are then processed to generate 30 snapshots that shows the spread of water from the ground surface down to a few meters.

  10. Time-lapse seismic analysis of the North Sea Fulmar Field

    Energy Technology Data Exchange (ETDEWEB)

    Johnston, David H.; McKenny, Robert S.; Burkhart, Tucker D.

    1998-12-31

    Time-lapse seismic analysis has been applied to two 3-D seismic surveys acquired over the central North Sea Fulmar field in a pre-production survey shot in 1977, reprocessed in 1987, and a survey in 1992. The Upper Jurassic reservoirs in the field have been under production since 1982. Differences in averaged impedance between the 1977 and 1992 surveys clearly show the effects of water influx and pressure decline. The changes observed in the seismic data are overall consistent with predictions obtained from a full-field, history-matched simulation. Differences in details may suggest areas of bypassed oil. Dta quality is not sufficient to serve as the sole basis for drilling decisions. 1 ref., 6 figs.

  11. Time lapse seismic observations and effects of reservoir compressibility at Teal South oil field

    Science.gov (United States)

    Islam, Nayyer

    One of the original ocean-bottom time-lapse seismic studies was performed at the Teal South oil field in the Gulf of Mexico during the late 1990's. This work reexamines some aspects of previous work using modern analysis techniques to provide improved quantitative interpretations. Using three-dimensional volume visualization of legacy data and the two phases of post-production time-lapse data, I provide additional insight into the fluid migration pathways and the pressure communication between different reservoirs, separated by faults. This work supports a conclusion from previous studies that production from one reservoir caused regional pressure decline that in turn resulted in liberation of gas from multiple surrounding unproduced reservoirs. I also provide an explanation for unusual time-lapse changes in amplitude-versus-offset (AVO) data related to the compaction of the producing reservoir which, in turn, changed an isotropic medium to an anisotropic medium. In the first part of this work, I examine regional changes in seismic response due to the production of oil and gas from one reservoir. The previous studies primarily used two post-production ocean-bottom surveys (Phase I and Phase II), and not the legacy streamer data, due to the unavailability of legacy prestack data and very different acquisition parameters. In order to incorporate the legacy data in the present study, all three post-stack data sets were cross-equalized and examined using instantaneous amplitude and energy volumes. This approach appears quite effective and helps to suppress changes unrelated to production while emphasizing those large-amplitude changes that are related to production in this noisy (by current standards) suite of data. I examine the multiple data sets first by using the instantaneous amplitude and energy attributes, and then also examine specific apparent time-lapse changes through direct comparisons of seismic traces. In so doing, I identify time-delays that, when

  12. Reservoir characterization using production data and time-lapse seismic data

    Energy Technology Data Exchange (ETDEWEB)

    Dadashpour, Mohsen

    2009-12-15

    The most commonly encountered, and probably the most challenging task in reservoir engineering, is to describe the reservoir accurately and efficiently. An accurate description of a reservoir is crucial to the management of production and efficiency of oil recovery. Reservoir modeling is an important step in a reservoir's future performance, which is in direct proportion to reservoir management, risk analysis and making key economic decisions. The purpose of reservoir modeling is to not only build a model that is consistent with currently available data, but to build one that gives a good prediction of its future behavior. Updating a reservoir model to behave as closely as possible to the real reservoir is called history matching, and the estimation of reservoir properties using this method is known as parameter estimation problem, which is an inversion process. Parameter estimation is a time consuming and non-unique problem with a large solution space. Saturation and pressure changes, and porosity and permeability distributions are the most common parameters to estimate in the oil industry. These parameters must be specified in every node within a petroleum reservoir simulator. These parameters will be adjusted until the model prediction data match the observation data to a sufficient degree. The solution space reduction in this project is done by adding time-lapse seismic data as a new set of dynamic data to the traditional production histories. Time-lapse (or 4D) seismic consists of two or more 3D seismic surveys shot at different calendar times. Time-lapse seismic surveys produce images at different times in a reservoir's history. The seismic response of a reservoir may change due to changes in pressure, fluid saturation and temperature. These changes in seismic images due to a variation in saturation and pressure can be used as additional observation data. Time-lapse seismic data are dynamical measurements which have a high resolution in the

  13. Active and passive electrical and seismic time-lapse monitoring of earthen embankments

    Science.gov (United States)

    Rittgers, Justin Bradley

    In this dissertation, I present research involving the application of active and passive geophysical data collection, data assimilation, and inverse modeling for the purpose of earthen embankment infrastructure assessment. Throughout the dissertation, I identify several data characteristics, and several challenges intrinsic to characterization and imaging of earthen embankments and anomalous seepage phenomena, from both a static and time-lapse geophysical monitoring perspective. I begin with the presentation of a field study conducted on a seeping earthen dam, involving static and independent inversions of active tomography data sets, and self-potential modeling of fluid flow within a confined aquifer. Additionally, I present results of active and passive time-lapse geophysical monitoring conducted during two meso-scale laboratory experiments involving the failure and self-healing of embankment filter materials via induced vertical cracking. Identified data signatures and trends, as well as 4D inversion results, are discussed as an underlying motivation for conducting subsequent research. Next, I present a new 4D acoustic emissions source localization algorithm that is applied to passive seismic monitoring data collected during a full-scale embankment failure test. Acoustic emissions localization results are then used to help spatially constrain 4D inversion of collocated self-potential monitoring data. I then turn to time-lapse joint inversion of active tomographic data sets applied to the characterization and monitoring of earthen embankments. Here, I develop a new technique for applying spatiotemporally varying structural joint inversion constraints. The new technique, referred to as Automatic Joint Constraints (AJC), is first demonstrated on a synthetic 2D joint model space, and is then applied to real geophysical monitoring data sets collected during a full-scale earthen embankment piping-failure test. Finally, I discuss some non-technical issues related to

  14. A multimethod Global Sensitivity Analysis to aid the calibration of geomechanical models via time-lapse seismic data

    Science.gov (United States)

    Price, D. C.; Angus, D. A.; Garcia, A.; Fisher, Q. J.; Parsons, S.; Kato, J.

    2018-03-01

    Time-lapse seismic attributes are used extensively in the history matching of production simulator models. However, although proven to contain information regarding production induced stress change, it is typically only loosely (i.e. qualitatively) used to calibrate geomechanical models. In this study we conduct a multimethod Global Sensitivity Analysis (GSA) to assess the feasibility and aid the quantitative calibration of geomechanical models via near-offset time-lapse seismic data. Specifically, the calibration of mechanical properties of the overburden. Via the GSA, we analyse the near-offset overburden seismic traveltimes from over 4000 perturbations of a Finite Element (FE) geomechanical model of a typical High Pressure High Temperature (HPHT) reservoir in the North Sea. We find that, out of an initially large set of material properties, the near-offset overburden traveltimes are primarily affected by Young's modulus and the effective stress (i.e. Biot) coefficient. The unexpected significance of the Biot coefficient highlights the importance of modelling fluid flow and pore pressure outside of the reservoir. The FE model is complex and highly nonlinear. Multiple combinations of model parameters can yield equally possible model realizations. Consequently, numerical calibration via a large number of random model perturbations is unfeasible. However, the significant differences in traveltime results suggest that more sophisticated calibration methods could potentially be feasible for finding numerous suitable solutions. The results of the time-varying GSA demonstrate how acquiring multiple vintages of time-lapse seismic data can be advantageous. However, they also suggest that significant overburden near-offset seismic time-shifts, useful for model calibration, may take up to 3 yrs after the start of production to manifest. Due to the nonlinearity of the model behaviour, similar uncertainty in the reservoir mechanical properties appears to influence overburden

  15. Seismic time-lapse imaging using Interferometric least-squares migration

    KAUST Repository

    Sinha, Mrinal

    2016-09-06

    One of the problems with 4D surveys is that the environmental conditions change over time so that the experiment is insufficiently repeatable. To mitigate this problem, we propose the use of interferometric least-squares migration (ILSM) to estimate the migration image for the baseline and monitor surveys. Here, a known reflector is used as the reference reflector for ILSM. Results with synthetic and field data show that ILSM can eliminate artifacts caused by non-repeatability in time-lapse surveys.

  16. Seismic time-lapse imaging using Interferometric least-squares migration

    KAUST Repository

    Sinha, Mrinal; Schuster, Gerard T.

    2016-01-01

    One of the problems with 4D surveys is that the environmental conditions change over time so that the experiment is insufficiently repeatable. To mitigate this problem, we propose the use of interferometric least-squares migration (ILSM) to estimate the migration image for the baseline and monitor surveys. Here, a known reflector is used as the reference reflector for ILSM. Results with synthetic and field data show that ILSM can eliminate artifacts caused by non-repeatability in time-lapse surveys.

  17. A Dynamic Programming Model for Optimizing Frequency of Time-Lapse Seismic Monitoring in Geological CO2 Storage

    Science.gov (United States)

    Bhattacharjya, D.; Mukerji, T.; Mascarenhas, O.; Weyant, J.

    2005-12-01

    Designing a cost-effective and reliable monitoring program is crucial to the success of any geological CO2 storage project. Effective design entails determining both, the optimal measurement modality, as well as the frequency of monitoring the site. Time-lapse seismic provides the best spatial coverage and resolution for reservoir monitoring. Initial results from Sleipner (Norway) have demonstrated effective monitoring of CO2 plume movement. However, time-lapse seismic is an expensive monitoring technique especially over the long term life of a storage project and should be used judiciously. We present a mathematical model based on dynamic programming that can be used to estimate site-specific optimal frequency of time-lapse surveys. The dynamics of the CO2 sequestration process are simplified and modeled as a four state Markov process with transition probabilities. The states are M: injected CO2 safely migrating within the target zone; L: leakage from the target zone to the adjacent geosphere; R: safe migration after recovery from leakage state; and S: seepage from geosphere to the biosphere. The states are observed only when a monitoring survey is performed. We assume that the system may go to state S only from state L. We also assume that once observed to be in state L, remedial measures are always taken to bring it back to state R. Remediation benefits are captured by calculating the expected penalty if CO2 seeped into the biosphere. There is a trade-off between the conflicting objectives of minimum discounted costs of performing the next time-lapse survey and minimum risk of seepage and its associated costly consequences. A survey performed earlier would spot the leakage earlier. Remediation methods would have been utilized earlier, resulting in savings in costs attributed to excessive seepage. On the other hand, there are also costs for the survey and remedial measures. The problem is solved numerically using Bellman's optimality principal of dynamic

  18. Interpretaion of synthetic seismic time-lapse monitoring data for Korea CCS project based on the acoustic-elastic coupled inversion

    Science.gov (United States)

    Oh, J.; Min, D.; Kim, W.; Huh, C.; Kang, S.

    2012-12-01

    Recently, the CCS (Carbon Capture and Storage) is one of the promising methods to reduce the CO2 emission. To evaluate the success of the CCS project, various geophysical monitoring techniques have been applied. Among them, the time-lapse seismic monitoring is one of the effective methods to investigate the migration of CO2 plume. To monitor the injected CO2 plume accurately, it is needed to interpret seismic monitoring data using not only the imaging technique but also the full waveform inversion, because subsurface material properties can be estimated through the inversion. However, previous works for interpreting seismic monitoring data are mainly based on the imaging technique. In this study, we perform the frequency-domain full waveform inversion for synthetic data obtained by the acoustic-elastic coupled modeling for the geological model made after Ulleung Basin, which is one of the CO2 storage prospects in Korea. We suppose the injection layer is located in fault-related anticlines in the Dolgorae Deformed Belt and, for more realistic situation, we contaminate the synthetic monitoring data with random noise and outliers. We perform the time-lapse full waveform inversion in two scenarios. One scenario is that the injected CO2 plume migrates within the injection layer and is stably captured. The other scenario is that the injected CO2 plume leaks through the weak part of the cap rock. Using the inverted P- and S-wave velocities and Poisson's ratio, we were able to detect the migration of the injected CO2 plume. Acknowledgment This work was financially supported by the Brain Korea 21 project of Energy Systems Engineering, the "Development of Technology for CO2 Marine Geological Storage" program funded by the Ministry of Land, Transport and Maritime Affairs (MLTM) of Korea and the Korea CCS R&D Center (KCRC) grant funded by the Korea government (Ministry of Education, Science and Technology) (No. 2012-0008926).

  19. Three-dimensional time-lapse velocity tomography of an underground longwall panel

    Energy Technology Data Exchange (ETDEWEB)

    Luxbacher, K.; Westman, E.; Swanson, P.; Karfakis, M. [Virginia Tech., Blacksburg, VA (United States). Dept. of Mining & Minerals Engineering

    2008-06-15

    Three-dimensional velocity tomograms were generated to image the stress redistribution around an underground coal longwall panel to produce a better understanding of the mechanisms that lead to ground failure, especially rockbursts. Mining-induced microseismic events provided passive sources for the three-dimensional velocity tomography. Surface-mounted geophones monitored microseismic activity for 18 days. Eighteen tomograms were generated and high-velocity regions correlated with high abutment stresses predicted by numerical modeling. Additionally, the high-velocity regions were observed to redistribute as the longwall face retreated, indicating that velocity tomography may be an appropriate technology for monitoring stress redistribution in underground mines.

  20. A Sparse Bayesian Imaging Technique for Efficient Recovery of Reservoir Channels With Time-Lapse Seismic Measurements

    KAUST Repository

    Sana, Furrukh

    2016-06-01

    Subsurface reservoir flow channels are characterized by high-permeability values and serve as preferred pathways for fluid propagation. Accurate estimation of their geophysical structures is thus of great importance for the oil industry. The ensemble Kalman filter (EnKF) is a widely used statistical technique for estimating subsurface reservoir model parameters. However, accurate reconstruction of the subsurface geological features with the EnKF is challenging because of the limited measurements available from the wells and the smoothing effects imposed by the \\\\ell _{2} -norm nature of its update step. A new EnKF scheme based on sparse domain representation was introduced by Sana et al. (2015) to incorporate useful prior structural information in the estimation process for efficient recovery of subsurface channels. In this paper, we extend this work in two ways: 1) investigate the effects of incorporating time-lapse seismic data on the channel reconstruction; and 2) explore a Bayesian sparse reconstruction algorithm with the potential ability to reduce the computational requirements. Numerical results suggest that the performance of the new sparse Bayesian based EnKF scheme is enhanced with the availability of seismic measurements, leading to further improvement in the recovery of flow channels structures. The sparse Bayesian approach further provides a computationally efficient framework for enforcing a sparse solution, especially with the possibility of using high sparsity rates through the inclusion of seismic data.

  1. A Sparse Bayesian Imaging Technique for Efficient Recovery of Reservoir Channels With Time-Lapse Seismic Measurements

    KAUST Repository

    Sana, Furrukh; Ravanelli, Fabio; Al-Naffouri, Tareq Y.; Hoteit, Ibrahim

    2016-01-01

    Subsurface reservoir flow channels are characterized by high-permeability values and serve as preferred pathways for fluid propagation. Accurate estimation of their geophysical structures is thus of great importance for the oil industry. The ensemble Kalman filter (EnKF) is a widely used statistical technique for estimating subsurface reservoir model parameters. However, accurate reconstruction of the subsurface geological features with the EnKF is challenging because of the limited measurements available from the wells and the smoothing effects imposed by the \\ell _{2} -norm nature of its update step. A new EnKF scheme based on sparse domain representation was introduced by Sana et al. (2015) to incorporate useful prior structural information in the estimation process for efficient recovery of subsurface channels. In this paper, we extend this work in two ways: 1) investigate the effects of incorporating time-lapse seismic data on the channel reconstruction; and 2) explore a Bayesian sparse reconstruction algorithm with the potential ability to reduce the computational requirements. Numerical results suggest that the performance of the new sparse Bayesian based EnKF scheme is enhanced with the availability of seismic measurements, leading to further improvement in the recovery of flow channels structures. The sparse Bayesian approach further provides a computationally efficient framework for enforcing a sparse solution, especially with the possibility of using high sparsity rates through the inclusion of seismic data.

  2. Application of Time-Lapse Seismic Monitoring for the Control and Optimization of CO2 Enhanced Oil Recovery Operations

    Energy Technology Data Exchange (ETDEWEB)

    Brian Toelle

    2008-11-30

    This project, 'Application of Time-Lapse Seismic Monitoring for the Control and Optimization of CO{sub 2} Enhanced Oil Recovery Operations', investigated the potential for monitoring CO{sub 2} floods in carbonate reservoirs through the use of standard p-wave seismic data. This primarily involved the use of 4D seismic (time lapse seismic) in an attempt to observe and map the movement of the injected CO{sub 2} through a carbonate reservoir. The differences between certain seismic attributes, such as amplitude, were used for this purpose. This technique has recently been shown to be effective in CO{sub 2} monitoring in Enhanced Oil Recovery (EOR) projects, such as Weyborne. This study was conducted in the Charlton 30/31 field in the northern Michigan Basin, which is a Silurian pinnacle reef that completed its primary production in 1997 and was scheduled for enhanced oil recovery using injected CO{sub 2}. Prior to injection an initial 'Base' 3D survey was obtained over the field and was then processed and interpreted. CO{sub 2} injection within the main portion of the reef was conducted intermittently during 13 months starting in August 2005. During this time, 29,000 tons of CO{sub 2} was injected into the Guelph formation, historically known as the Niagaran Brown formation. By September 2006, the reservoir pressure within the reef had risen to approximately 2000 lbs and oil and water production from the one producing well within the field had increased significantly. The determination of the reservoir's porosity distribution, a critical aspect of reservoir characterization and simulation, proved to be a significant portion of this project. In order to relate the differences observed between the seismic attributes seen on the multiple 3D seismic surveys and the actual location of the CO{sub 2}, a predictive reservoir simulation model was developed based on seismic attributes obtained from the base 3D seismic survey and available well data. This

  3. A derivative-free approach for the estimation of porosity and permeability using time-lapse seismic and production data

    International Nuclear Information System (INIS)

    Dadashpour, Mohsen; Kleppe, Jon; Landrø, Martin; Echeverria Ciaurri, David; Mukerji, Tapan

    2010-01-01

    In this study, we apply a derivative-free optimization algorithm to estimate porosity and permeability from time-lapse seismic data and production data from a real reservoir (Norne field). In some circumstances, obtaining gradient information (exact and/or approximate) can be problematic e.g. derivatives are not available from a commercial simulator, or results are needed within a very short time frame. Derivative-free optimization approaches can be very time consuming because they often require many simulations. Typically, one iteration roughly needs as many simulations as the number of optimization variables. In this work, we propose two ways to significantly increase the efficiency of an optimization methodology in model inversion problems. First, by principal component analysis we decrease the number of optimization variables while keeping geostatistical consistency, and second, noticing that some optimization methods are very amenable to being parallelized, we apply them within a distributed computing framework. If we combine all this, the model inversion approach can be robust, fairly efficient and very simple to implement. In this paper, we apply the methodology to two cases: a semi-synthetic model with noisy data, and a case based entirely on field data. The results show that the derivative-free approach presented is robust against noise in the data

  4. Time-lapse changes in velocity and anisotropy in Japan's near surface after the 2011 Tohoku earthquake

    Science.gov (United States)

    Snieder, R.; Nakata, N.

    2012-12-01

    A strong-motion recording network, KiK-net, helps us to monitor temporal changes in the near surface in Japan. Each KiK-net station has two seismometers at the free surface and in a borehole a few hundred meters deep, and we can retrieve a traveling wave from the borehole receiver to the surface receiver by applying deconvolution based seismic interferometry. KiK-net recorded the 2011 Tohoku earthquake, which is one of the largest earthquakes in recent history, and seismicity around the time of the main shock. Using records of these seismicity and computing mean values of near-surface shear-wave velocities in the periods of January 1--March 10 and March 12--May 26 in 2011, we detect about a 5% reduction in the velocity after the Tohoku earthquake. The area of the velocity reduction is about 1,200 km wide, which is much wider than earlier studies reporting velocity reductions after larger earthquakes. The reduction partly recovers with time. We can also estimate the azimuthal anisotropy by detecting shear-wave splitting after applying seismic interferometry. Estimating mean values over the same periods as the velocity, we find the strength of anisotropy increased in most parts of northeastern Japan, but fast shear-wave polarization directions in the near surface did not significantly change. The changes in anisotropy and velocity are generally correlated, especially in the northeastern Honshu (the main island in Japan).

  5. Quantitative monitoring of CO2 injection at Sleipner using seismic full waveform inversion in the time lapse mode and rock physics modeling

    International Nuclear Information System (INIS)

    Queisser, M.P.

    2012-01-01

    Carbon capture and sequestration is a technology to achieve a considerable deceleration of CO 2 emission promptly. Since 1996 one of the largest CO 2 storage projects is taking place at Sleipner in the Norwegian North Sea. In order to monitor injected CO 2 , time lapse seismic monitoring surveys have been carried out. Estimating subsurface parameters from the Sleipner seismic data is a challenging problem due to the specific geology of the storage reservoir, which is further complicated by injected CO 2 . Most seismic imaging methods enable only qualitative insights into the subsurface. Motivated by the need for a quantitative seismic monitoring of the injected CO 2 , I have applied 2D seismic full waveform inversion to seismic data sets from Sleipner from 1994 (baseline), 1999 and 2006 along three seismic lines to infer subsurface parameters and parameter changes in the storage reservoir. The P-wave velocity is the major parameter, as it is the most sensitive to CO 2 injection. An energy preconditioning of the gradient has been implemented. The usual source wavelet calibration did not prove to be reliable. An alternative source calibration has been successfully applied. By comparing seismic images with inversion results, I found that using seismic images to locate CO 2 accumulations in the subsurface may be misleading. The quantitative imaging approach using full waveform inversion resulted in a consistent evolution of the model parameter with time. Major reductions in P-wave velocity and hence the CO 2 accumulations could be quantitatively imaged down to a resolution of 10 m. Observed travel time shifts due to CO 2 injection are comparable to those derived from the inversion result. In order to estimate CO 2 saturations, rock physical concepts have been combined and extended to arrive at a rock physical formulation of the subsurface at Sleipner. I used pseudo Monte Carlo rock physics modeling to assess the influence of lithologic heterogeneity on the CO 2

  6. Time lapse survey plan on the first offshore methane hydrate production test in 2013 around the eastern Nankai Trough area by multi-component OBC seismic tool

    Science.gov (United States)

    Inamori, T.; Hayashi, T.; Asakawa, E.; Takahashi, H.; Saeki, T.

    2011-12-01

    We are planning to conduct the multi-component ocean bottom cable (hereafter OBC) seismic survey to monitor the methane hydrate dissociation zone at the 1st offshore methane hydrate production test site in the eastern Nankai Trough, Japan, in 2013. We conducted the first OBC survey in the methane hydrate concentrated zone around the eastern Nankai Trough area in 2006 by RSCS which we developed. We obtained to the good image of methane hydrate bearing layer by P-P section as similar as the conventional surface seismic survey. However, we could not obtain the good image from P-S section compared with P-P section. On the other hand, we studied the sonic velocity distribution at the Mallik 2nd production test before and after in 2007, by the sonic tool data. We could clearly delineate the decrease of S-wave velocity, however, we could not detect the decrease of P-wave velocity because of the presence of the dissociated methane gas from methane hydrate. From these reason we guess the S-wave data is more proper to delineate the condition of the methane hydrate zone at the methane hydrate production tests than P-wave data. We are now developing the new OBC system, which we call Deep-sea Seismic System (hereafter DSS). The sensor of the DSS will install three accelerometers and one hydrophone. A feasibility study to detect the methane hydrate dissociation with the DSS was carried out and we found that the methane hydrate dissociation could be detected with the DSS depending on the zone of the dissociation. And the baseline survey will be held at the 1st offshore methane hydrate production test site in summer 2012. Two monitoring surveys are planned after the methane hydrate production test in 2013. We believe that we will get the good images to delineate the methane hydrate dissociated zone from this time lapse survey. The Authors would like to thank METI, MH21 consortium and JOGMEC for permissions to publish this paper.

  7. Time-Lapse Joint Inversion of Cross-Well DC Resistivity and Seismic Data: A Numerical Investigation

    Science.gov (United States)

    Time-lapse joint inversion of geophysical data is required to image the evolution of oil reservoirs during production and enhanced oil recovery, CO2 sequestration, geothermal fields during production, and to monitor the evolution of contaminant plumes. Joint inversion schemes red...

  8. Time-lapse imaging of fault properties at seismogenic depth using repeating earthquakes, active sources and seismic ambient noise

    Science.gov (United States)

    Cheng, Xin

    2009-12-01

    The time-varying stress field of fault systems at seismogenic depths plays the mort important role in controlling the sequencing and nucleation of seismic events. Using seismic observations from repeating earthquakes, controlled active sources and seismic ambient noise, five studies at four different fault systems across North America, Central Japan, North and mid-West China are presented to describe our efforts to measure such time dependent structural properties. Repeating and similar earthquakes are hunted and analyzed to study the post-seismic fault relaxation at the aftershock zone of the 1984 M 6.8 western Nagano and the 1976 M 7.8 Tangshan earthquakes. The lack of observed repeating earthquakes at western Nagano is attributed to the absence of a well developed weak fault zone, suggesting that the fault damage zone has been almost completely healed. In contrast, the high percentage of similar and repeating events found at Tangshan suggest the existence of mature fault zones characterized by stable creep under steady tectonic loading. At the Parkfield region of the San Andreas Fault, repeating earthquake clusters and chemical explosions are used to construct a scatterer migration image based on the observation of systematic temporal variations in the seismic waveforms across the occurrence time of the 2004 M 6 Parkfield earthquake. Coseismic fluid charge or discharge in fractures caused by the Parkfield earthquake is used to explain the observed seismic scattering properties change at depth. In the same region, a controlled source cross-well experiment conducted at SAFOD pilot and main holes documents two large excursions in the travel time required for a shear wave to travel through the rock along a fixed pathway shortly before two rupture events, suggesting that they may be related to pre-rupture stress induced changes in crack properties. At central China, a tomographic inversion based on the theory of seismic ambient noise and coda wave interferometry

  9. Modeling of time-lapse multi-scale seismic monitoring of CO2 injected into a fault zone to enhance the characterization of permeability in enhanced geothermal systems

    Science.gov (United States)

    Zhang, R.; Borgia, A.; Daley, T. M.; Oldenburg, C. M.; Jung, Y.; Lee, K. J.; Doughty, C.; Altundas, B.; Chugunov, N.; Ramakrishnan, T. S.

    2017-12-01

    Subsurface permeable faults and fracture networks play a critical role for enhanced geothermal systems (EGS) by providing conduits for fluid flow. Characterization of the permeable flow paths before and after stimulation is necessary to evaluate and optimize energy extraction. To provide insight into the feasibility of using CO2 as a contrast agent to enhance fault characterization by seismic methods, we model seismic monitoring of supercritical CO2 (scCO2) injected into a fault. During the CO2 injection, the original brine is replaced by scCO2, which leads to variations in geophysical properties of the formation. To explore the technical feasibility of the approach, we present modeling results for different time-lapse seismic methods including surface seismic, vertical seismic profiling (VSP), and a cross-well survey. We simulate the injection and production of CO2 into a normal fault in a system based on the Brady's geothermal field and model pressure and saturation variations in the fault zone using TOUGH2-ECO2N. The simulation results provide changing fluid properties during the injection, such as saturation and salinity changes, which allow us to estimate corresponding changes in seismic properties of the fault and the formation. We model the response of the system to active seismic monitoring in time-lapse mode using an anisotropic finite difference method with modifications for fracture compliance. Results to date show that even narrow fault and fracture zones filled with CO2 can be better detected using the VSP and cross-well survey geometry, while it would be difficult to image the CO2 plume by using surface seismic methods.

  10. Mobility Effect on Poroelastic Seismic Signatures in Partially Saturated Rocks With Applications in Time-Lapse Monitoring of a Heavy Oil Reservoir

    Science.gov (United States)

    Zhao, Luanxiao; Yuan, Hemin; Yang, Jingkang; Han, De-hua; Geng, Jianhua; Zhou, Rui; Li, Hui; Yao, Qiuliang

    2017-11-01

    Conventional seismic analysis in partially saturated rocks normally lays emphasis on estimating pore fluid content and saturation, typically ignoring the effect of mobility, which decides the ability of fluids moving in the porous rocks. Deformation resulting from a seismic wave in heterogeneous partially saturated media can cause pore fluid pressure relaxation at mesoscopic scale, thereby making the fluid mobility inherently associated with poroelastic reflectivity. For two typical gas-brine reservoir models, with the given rock and fluid properties, the numerical analysis suggests that variations of patchy fluid saturation, fluid compressibility contrast, and acoustic stiffness of rock frame collectively affect the seismic reflection dependence on mobility. In particular, the realistic compressibility contrast of fluid patches in shallow and deep reservoir environments plays an important role in determining the reflection sensitivity to mobility. We also use a time-lapse seismic data set from a Steam-Assisted Gravity Drainage producing heavy oil reservoir to demonstrate that mobility change coupled with patchy saturation possibly leads to seismic spectral energy shifting from the baseline to monitor line. Our workflow starts from performing seismic spectral analysis on the targeted reflectivity interface. Then, on the basis of mesoscopic fluid pressure diffusion between patches of steam and heavy oil, poroelastic reflectivity modeling is conducted to understand the shift of the central frequency toward low frequencies after the steam injection. The presented results open the possibility of monitoring mobility change of a partially saturated geological formation from dissipation-related seismic attributes.

  11. Time-lapse changes of P- and S-wave velocities and shear wave splitting in the first year after the 2011 Tohoku earthquake, Japan: shallow subsurface

    Science.gov (United States)

    Sawazaki, Kaoru; Snieder, Roel

    2013-04-01

    We detect time-lapse changes in P- and S-wave velocities (hereafter, VP and VS, respectively) and shear wave splitting parameters associated with the 2011 Tohoku earthquake, Japan, at depths between 0 and 504 m. We estimate not only medium parameters but also the 95 per cent confidence interval of the estimated velocity change by applying a new least squares inversion scheme to the deconvolution analysis of KiK-net vertical array records. Up to 6 per cent VS reduction is observed at more than half of the analysed KiK-net stations in northeastern Japan with over 95 per cent confidence in the first month after the main shock. There is a considerable correlation between the S-wave traveltime delay and the maximum horizontal dynamic strain (MDS) by the main shock motion when the strain exceeds 5 × 10- 4 on the ground surface. This correlation is not clearly observed for MDS at the borehole bottom. On the contrary, VP and shear wave splitting parameters do not show systematic changes after the Tohoku earthquake. These results indicate that the time-lapse change is concentrated near the ground surface, especially in loosely packed soil layers. We conclude that the behaviour of VP, VS and shear wave splitting parameters are explained by the generation of omnidirectional cracks near the ground surface and by the diffusion of water in the porous subsurface. Recovery of VS should be related to healing of the crack which is proportional to the logarithm of the lapse time after the main shock and/or to decompaction after shaking.

  12. The time lapse experiment in Al Wasse water pumping field in Saudi Arabia by an ultra-stable seismic source (ACROSS)

    Science.gov (United States)

    AlAnezi, Ghunaim; Kasahara, Junzo; AlDamegh, Khaled S.; Lafouza, Omar; AlYousef, Khaled; Almalki, Fahad; Nishiyama, Eichiro

    2015-04-01

    We have developed the time lapse technology for EOR (enhanced oil recovery) and CCS (Carbon Capture and Storage) using a very stable and continuous seismic source called ACROSS (Accurately Controlled Routinely Operated Signal System) with multi-geophones. Since 2011, we have tested this technology in the context of carbonate rocks in Saudi Arabia. The Al Wasee water pumping site approximately 120 km east of Riyadh city has been selected as a trail-site. The intention is to observe the changes in aquifers induced by pumping operations. One ACROSS source unit was installed at the Al Wasee site in December 2011 and we are continuing the field test. The instrument has been operated from 10 to 50 Hz with 40 tons-f at 50 Hz. Using alternatively clockwise and counter-clockwise rotations we can synthesize vertical and horizontal forces, respectively. 31 3C-geophones in 2 km x 3 km area and four nearby 3Cgeophones have been used to monitor the seismic changes from pumping the water. The one and half month data between December 2012 and February 2013 show continuous and clear change of observed waveforms for all 31 stations while the source signature did not change. The change is closest and fastest at the station #42. The cause of continuous change with time is interpreted as pumping of water by 64 wells located in this field.

  13. A-3 Construction Time Lapse

    Science.gov (United States)

    2009-01-01

    A time lapse from start to finish of steel erection for the 235-foot tall A-3 Test Stand. Ground work for the stand was broken in August 2008 and the final structural steel beam was placed April 9, 2009.

  14. Seismic texture and amplitude analysis of large scale fluid escape pipes using time lapses seismic surveys: examples from the Loyal Field (Scotland, UK)

    Science.gov (United States)

    Maestrelli, Daniele; Jihad, Ali; Iacopini, David; Bond, Clare

    2016-04-01

    Fluid escape pipes are key features of primary interest for the analysis of vertical fluid flow and secondary hydrocarbon migration in sedimentary basin. Identified worldwide (Løset et al., 2009), they acquired more and more importance as they represent critical pathways for supply of methane and potential structure for leakage into the storage reservoir (Cartwright & Santamarina, 2015). Therefore, understanding their genesis, internal characteristics and seismic expression, is of great significance for the exploration industry. Here we propose a detailed characterization of the internal seismic texture of some seal bypass system (e.g fluid escape pipes) from a 4D seismic survey (released by the BP) recently acquired in the Loyal Field. The seal by pass structure are characterized by big-scale fluid escape pipes affecting the Upper Paleogene/Neogene stratigraphic succession in the Loyal Field, Scotland (UK). The Loyal field, is located on the edge of the Faroe-Shetland Channel slope, about 130 km west of Shetland (Quadrants 204/205 of the UKCS) and has been recently re-appraised and re developed by a consortium led by BP. The 3D detailed mapping analysis of the full and partial stack survey (processed using amplitude preservation workflows) shows a complex system of fluid pipe structure rooted in the pre Lista formation and developed across the paleogene and Neogene Units. Geometrical analysis show that pipes got diameter varying between 100-300 m and a length of 500 m to 2 km. Most pipes seem to terminate abruptly at discrete subsurface horizons or in diffuse termination suggesting multiple overpressured events and lateral fluid migration (through Darcy flows) across the overburden units. The internal texture analysis of the large pipes, (across both the root and main conduit zones), using near, medium and far offset stack dataset (processed through an amplitude preserved PSTM workflow) shows a tendency of up-bending of reflection (rather than pulls up artefacts

  15. Constraining the depth of the time-lapse changes of P- and S-wave velocities in the first year after the 2011 Tohoku earthquake, Japan

    Science.gov (United States)

    Sawazaki, K.; Kimura, H.; Uchida, N.; Takagi, R.; Snieder, R.

    2012-12-01

    Using deconvolutions of vertical array of KiK-net (nationwide strong-motion seismograph digital network in Japan) records and applying coda wave interferometry (CWI) to Hi-net (high-sensitivity seismograph network in Japan; collocated with a borehole receiver of KiK-net) borehole records, we constrain the responsible depth of the medium changes associated with the 2011 Tohoku earthquake (MW9.0). There is a systematic reduction in VS up to 6% in the shallow subsurface which experienced strong dynamic strain by the Tohoku earthquake. In contrast, both positive and negative changes are observed for VP, which are less than 2% for both directions. We propose that this discrepancy between the changes of VS and VP is explained by the behavior of shear and bulk moduli of a porous medium exposed to an increase of excess pore fluid pressure. At many stations, VS recovers proportional to logarithm of the lapse time after the mainshock, and mostly recovers to the reference value obtained before the mainshock in one year. However, some stations that have been exposed by additional strong motions of aftershocks and/or other earthquakes take much longer time for the recovery. The CWI technique applied to horizontal components of S-coda reveals a velocity reduction up to 0.2% widely along the coastline of northeastern Japan. For the vertical component of P-coda, however, the velocity change is mostly less than 0.1% at the same region. From single scattering model including P-S and S-P conversion scatterings, we verify that both components are sensitive to VS change around the source, but the vertical component of P-coda is sensitive to VP change around the receiver. Consequently, the difference in velocity changes revealed from the horizontal and vertical components represents the difference of VS and VP changes near the receiver. As the conclusion, VS reduction ratio in the deep lithosphere is smaller than that at the shallow ground by 1 to 2 orders.

  16. The time-lapse AVO difference inversion for changes in reservoir parameters

    Science.gov (United States)

    Longxiao, Zhi; Hanming, Gu; Yan, Li

    2016-12-01

    The result of conventional time-lapse seismic processing is the difference between the amplitude and the post-stack seismic data. Although stack processing can improve the signal-to-noise ratio (SNR) of seismic data, it also causes a considerable loss of important information about the amplitude changes and only gives the qualitative interpretation. To predict the changes in reservoir fluid more precisely and accurately, we also need the quantitative information of the reservoir. To achieve this aim, we develop the method of time-lapse AVO (amplitude versus offset) difference inversion. For the inversion of reservoir changes in elastic parameters, we apply the Gardner equation as the constraint and convert the three-parameter inversion of elastic parameter changes into a two-parameter inversion to make the inversion more stable. For the inversion of variations in the reservoir parameters, we infer the relation between the difference of the reflection coefficient and variations in the reservoir parameters, and then invert reservoir parameter changes directly. The results of the theoretical modeling computation and practical application show that our method can estimate the relative variations in reservoir density, P-wave and S-wave velocity, calculate reservoir changes in water saturation and effective pressure accurately, and then provide reference for the rational exploitation of the reservoir.

  17. History matching of time-lapse crosswell data using ensemble kalman filtering

    KAUST Repository

    de Matos Ravanelli, Fabio Miguel

    2015-09-03

    Data from crosswell seismic surveys is processed to provide crosswell time-lapse data to map fluid changes in a reservoir where time-lapse or 4D seismic data is unavailable or unreliable, such as in onshore reservoirs. The resultant processing results provide quantitative information for history matching purposes using a probabilistic approach to take in account uncertainties in the geological model and reduce uncertainties in reservoir production forecasts.

  18. Application of a linear finite-frequency theory to time-lapse crosswell tomography in ultrasonic and numerical experiments

    NARCIS (Netherlands)

    Spetzler, J.; Sijacic, D.; Wolf, K.H.A.A.

    2007-01-01

    Time-lapse seismic monitoring is the geophysical discipline whereby multiple data sets recorded at the same location but at different times are used to locate and quantify temporal changes in the elastic parameters of the subsurface. We validate a time-lapse monitoring method by crosswell tomography

  19. Monotoring of CO2 Sequestration at Sleipner Using Full Waveform Inversion in Time-lapse Mode.

    Science.gov (United States)

    Gosselet, A.; Singh, S. C.

    2007-12-01

    It is now widely admitted that recent increase of CO2 in the atmosphere is due to human activities. The consecutive greenhouse effect is a major ecological concern. Geological storage is one proposed way to reduce atmosphere CO2 emissions. The Sleipner methane field, North Sea, is the very first site where CO2 has been injected back into a deep saline aquifer. In 1996, the Norwegian company Statoil and its partners began the production of the methane. The extracted methane contains a relatively high ratio of CO2, between 4% and 9%, that has to be reduced below 2.5% before delivering into the pipeline. An environmental tax introduced in Norway as early as 1991 prompted the company to store the separated CO2 instead of releasing it into the atmosphere as usually done. The CO2 is injected at the base of the Utsira sands. This water bearing formation lies at a depth between 800 and 1000m and is sealed by a thick shale layer. Seismic monitoring is a key tool in this strategy from a security standpoint and for sequestration optimization itself. Consequently, 3D seismic data were acquired before injection in 1994 and after injection in 1999, 2001, 2002, 2004 and 2006. Well-log revealed that the reservoir is crossed by thin shale layers that are 1 to 10m thick. CO2 rises up and is confined vertically by the shale layers, favouring horizontal gas migration and creating gas bearing thin beds. Seismic imaging of the gas pockets is therefore a challenging problem because large velocity variations occur on very short distance. Classical processing of time-lapse data consists in subtracting repeated survey seismic traces from the pre- injection baseline traces to exhibit changes within the reservoir. This approach remains qualitative, providing only the shape and extent of the gas cloud. Instead, we propose to compare elastic models of the subsurface computed through 2D full wave form inversion, an advanced seismic imaging technique. This method is based on the wave equation

  20. Waveform tomography images of velocity and inelastic attenuation from the Mallik 2002 crosshole seismic surveys

    Energy Technology Data Exchange (ETDEWEB)

    Pratt, R.G.; Hou, F. [Queen' s Univ., Kingston, ON (Canada); Bauer, K.; Weber, M. [GeoForschungsZentrum Potsdam, Potsdam (Germany)

    2005-07-01

    A time-lapse crosshole seismic survey was conducted at the Mallik field in Canada's Northwest Territories as part of the 2002 Mallik Gas Hydrate Production Research Well Program. The acquired data provided information on the distribution of the compressional-velocity and compressional-attenuation properties of the sediments. Waveform tomography extracted that information and provided subwavelength high-resolution quantitative images of the seismic velocity and attenuation from the first repeat survey, using frequencies between 100 Hz and 1000 Hz. A preprocessing flow was applied to the waveform data that includes tube-wave suppression, low-pass filtering, spatial subsampling, time-windowing, and amplitude equalization. Travel times by anisotropic velocity tomography was used to obtain the starting model for the waveform tomography. The gas-hydrate-bearing sediments were seen as laterally, continuous, high-velocity anomalies and were characterized by an increase in attenuation. The velocity images resolved individual layers as thin as a few metres. These layers could be followed across the area of interest. Slight lateral changes in velocity and in the attenuation factor were observed.

  1. Interferometric full-waveform inversion of time-lapse data

    KAUST Repository

    Sinha, Mrinal

    2017-08-17

    One of the key challenges associated with time-lapse surveys is ensuring the repeatability between the baseline and monitor surveys. Non-repeatability between the surveys is caused by varying environmental conditions over the course of different surveys. To overcome this challenge, we propose the use of interferometric full waveform inversion (IFWI) for inverting the velocity model from data recorded by baseline and monitor surveys. A known reflector is used as the reference reflector for IFWI, and the data are naturally redatumed to this reference reflector using natural reflections as the redatuming operator. This natural redatuming mitigates the artifacts introduced by the repeatability errors that originate above the reference reflector.

  2. Time-Lapse Measurement of Wellbore Integrity

    Science.gov (United States)

    Duguid, A.

    2017-12-01

    Well integrity is becoming more important as wells are used longer or repurposed. For CO2, shale gas, and other projects it has become apparent that wells represent the most likely unintended migration pathway for fluids out of the reservoir. Comprehensive logging programs have been employed to determine the condition of legacy wells in North America. These studies provide examples of assessment technologies. Logging programs have included pulsed neutron logging, ultrasonic well mapping, and cement bond logging. While these studies provide examples of what can be measured, they have only conducted a single round of logging and cannot show if the well has changed over time. Recent experience with time-lapse logging of three monitoring wells at a US Department of Energy sponsored CO2 project has shown the full value of similar tools. Time-lapse logging has shown that well integrity changes over time can be identified. It has also shown that the inclusion of and location of monitoring technologies in the well and the choice of construction materials must be carefully considered. Two of the wells were approximately eight years old at the time of study; they were constructed with steel and fiberglass casing sections and had lines on the outside of the casing running to the surface. The third well was 68 years old when it was studied and was originally constructed as a production well. Repeat logs were collected six or eight years after initial logging. Time-lapse logging showed the evolution of the wells. The results identified locations where cement degraded over time and locations that showed little change. The ultrasonic well maps show clearly that the lines used to connect the monitoring technology to the surface are visible and have a local effect on cement isolation. Testing and sampling was conducted along with logging. It provided insight into changes identified in the time-lapse log results. Point permeability testing was used to provide an in-situ point

  3. Estimation of pore pressure from seismic velocities

    International Nuclear Information System (INIS)

    Perez, Zayra; Ojeda, German Y; Mateus, Darwin

    2009-01-01

    On pore pressure calculations it is common to obtain a profile in a well bore, which is then extrapolated toward offset wells. This practice might generate mistakes on pore pressure measurements, since geological conditions may change from a well bore to another, even into the same basin. Therefore, it is important to use other tools which allow engineers not only to detect and estimate in an indirect way overpressure zones, but also to keep a lateral tracking of possible changes that may affect those values in the different formations. Taking into account this situation, we applied a methodology that estimates formation pressure from 3D seismic velocities by using the Eaton method. First, we estimated formation pore pressure; then, we identified possible overpressure zones. Finally, those results obtained from seismic information were analyzed involving well logs and pore pressure tests, in order to compare real data with prediction based on seismic information from the Colombian foothill.

  4. Effect of Phase Transformations on Seismic Velocities

    Science.gov (United States)

    Weidner, D. J.; Li, L.; Whitaker, M.; Triplett, R.

    2017-12-01

    The radial velocity structure of the Earth consists of smooth variations of velocities with depth punctuated by abrupt changes of velocity, which are typically due to multivariant phase transformations, where high - low pressure phases can coexist. In this mixed phase region, both the effective shear and bulk moduli will be significantly reduced by the dynamic interaction of the propagating wave and the phase transition if the period of the wave is long enough relative to the kinetic time so that some of the transition can take place. In this presentation, we will give examples from both laboratory studies of phases transitions of Earth minerals and the calculated velocity profile based on our models. We focus on understanding the time limiting factor of the phase transformation in order to extrapolate laboratory results to Earth observations. Both the olivine to ringwoodite transition and KLB-1 partial melting are explored. We find that when the transformation requires diffusion, the kinetics are often slowed down considerably and as a result the diffusivity of atoms become the limiting factor of characteristic time. Specifically Fe-Mg exchange rate in the olivine-ringwoodite phase transition becomes the limiting factor that seismic waves are likely to sample. On the other hand, partial melting is an extremely fast phase transformation at seismic wave periods. We present evidence that ultrasonic waves, with a period of a few tens of nanoseconds, are slowed by the reduction of the effective elastic moduli in this case.

  5. Seismic Wave Velocity in Earth's Shallow Core

    Science.gov (United States)

    Alexandrakis, C.; Eaton, D. W.

    2008-12-01

    Studies of the outer core indicate that it is composed of liquid Fe and Ni alloyed with a ~10% fraction of light elements such as O, S or Si. Recently, unusual features, such as sediment accumulation, immiscible fluid layers or stagnant convection, have been predicted in the shallow core region. Secular cooling and compositional buoyancy drive vigorous convection that sustains the geodynamo, although critical details of light-element composition and thermal regime remain uncertain. Seismic velocity models can provide important constraints on the light element composition, however global reference models, such as Preliminary Reference Earth Model (PREM), IASP91 and AK135 vary significantly in the 200 km below the core-mantle boundary. Past studies of the outermost core velocity structure have been hampered by traveltime uncertainties due to lowermost mantle heterogeneities. The recently published Empirical Transfer Function (ETF) method has been shown to reduce the uncertainty using a waveform stacking approach to improve global observations of SmKS teleseismic waves. Here, we apply the ETF method to achieve a precise top-of-core velocity measurement of 8.05 ± 0.03 km/s. This new model accords well with PREM. Since PREM is based on the adiabatic form of the Adams-Williamson equation, it assumes a well mixed (i.e. homogeneous) composition. This result suggests a lack of heterogeneity in the outermost core due to layering or stagnant convection.

  6. Time-Lapse Videos for Physics Education: Specific Examples

    Science.gov (United States)

    Vollmer, Michael; Möllmann, Klaus-Peter

    2018-01-01

    There are many physics experiments with long time scales such that they are usually neither shown in the physics class room nor in student labs. However, they can be easily recorded with time-lapse cameras and the respective time-lapse videos allow qualitative and/or quantitative analysis of the underlying physics. Here, we present some examples…

  7. Assessing ground compaction via time lapse surface wave analysis

    Czech Academy of Sciences Publication Activity Database

    Dal Moro, Giancarlo; Al-Arifi, N.; Moustafa, S.S.R.

    2016-01-01

    Roč. 13, č. 3 (2016), s. 249-256 ISSN 1214-9705 Institutional support: RVO:67985891 Keywords : Full velocity spectrum (FVS) analysis * ground compaction * ground compaction * phase velocities * Rayleigh waves * seismic data inversion * surface wave dispersion * surface waves Subject RIV: DC - Siesmology, Volcanology, Earth Structure Impact factor: 0.699, year: 2016

  8. Seismic Tomography and the Development of a State Velocity Profile

    Science.gov (United States)

    Marsh, S. J.; Nakata, N.

    2017-12-01

    Earthquakes have been a growing concern in the State of Oklahoma in the last few years and as a result, accurate earthquake location is of utmost importance. This means using a high resolution velocity model with both lateral and vertical variations. Velocity data is determined using ambient noise seismic interferometry and tomography. Passive seismic data was acquired from multiple IRIS networks over the span of eight years (2009-2016) and filtered for earthquake removal to obtain the background ambient noise profile for the state. Seismic Interferometry is applied to simulate ray paths between stations, this is done with each possible station pair for highest resolution. Finally the method of seismic tomography is used to extract the velocity data and develop the state velocity map. The final velocity profile will be a compilation of different network analyses due to changing station availability from year to year. North-Central Oklahoma has a dense seismic network and has been operating for the past few years. The seismic stations are located here because this is the most seismically active region. Other parts of the state have not had consistent coverage from year to year, and as such a reliable and high resolution velocity profile cannot be determined from this network. However, the Transportable Array (TA) passed through Oklahoma in 2014 and provided a much wider and evenly spaced coverage. The goal of this study is to ultimately combine these two arrays over time, and provide a high quality velocity profile for the State of Oklahoma.

  9. Time-lapse videos for physics education: specific examples

    Science.gov (United States)

    Vollmer, Michael; Möllmann, Klaus-Peter

    2018-05-01

    There are many physics experiments with long time scales such that they are usually neither shown in the physics class room nor in student labs. However, they can be easily recorded with time-lapse cameras and the respective time-lapse videos allow qualitative and/or quantitative analysis of the underlying physics. Here, we present some examples from thermal physics (melting, evaporation, cooling) as well as diffusion processes

  10. Land time-lapse CSEM : Collecting, modeling and inversion of CSEM data for a steam-injected oil field

    NARCIS (Netherlands)

    Schaller, A.M.

    2018-01-01

    Geophysical methods are widely used for hydrocarbon exploration and time-lapse measurements. One method that can be applied in place of or in addition to the routinely used seismic method, is the Controlled-Source ElectroMagnetic (CSEM) method. The work described in this thesis explores various

  11. Correlation-based seismic velocity inversion

    NARCIS (Netherlands)

    Van Leeuwen, T.

    2010-01-01

    Most of our knowledge of the subsurface comes from the measurement of quantities that are indirectly related to the earth’s structure. Examples are seismic waves, gravity and electromagnetic waves. We consider the use of seismic waves for inference of structural information on an exploration scale.

  12. Compressive and Shear Wave Velocity Profiles using Seismic Refraction Technique

    International Nuclear Information System (INIS)

    Aziman, M; Hazreek, Z A M; Azhar, A T S; Haimi, D S

    2016-01-01

    Seismic refraction measurement is one of the geophysics exploration techniques to determine soil profile. Meanwhile, the borehole technique is an established way to identify the changes of soil layer based on number of blows penetrating the soil. Both techniques are commonly adopted for subsurface investigation. The seismic refraction test is a non-destructive and relatively fast assessment compared to borehole technique. The soil velocities of compressive wave and shear wave derived from the seismic refraction measurements can be directly utilised to calculate soil parameters such as soil modulus and Poisson’s ratio. This study investigates the seismic refraction techniques to obtain compressive and shear wave velocity profile. Using the vertical and horizontal geophones as well as vertical and horizontal strike directions of the transient seismic source, the propagation of compressive wave and shear wave can be examined, respectively. The study was conducted at Sejagung Sri Medan. The seismic velocity profile was obtained at a depth of 20 m. The velocity of the shear wave is about half of the velocity of the compression wave. The soil profiles of compressive and shear wave velocities were verified using the borehole data and showed good agreement with the borehole data. (paper)

  13. Joint inversion of time-lapse VSP data for monitoring CO2 injection at the Farnsworth EOR field in Texas

    Science.gov (United States)

    Zhang, M.; Gao, K.; Balch, R. S.; Huang, L.

    2016-12-01

    During the Development Phase (Phase III) of the U.S. Southwest Regional Partnership on Carbon Sequestration (SWP), time-lapse 3D vertical seismic profiling (VSP) data were acquired to monitor CO2 injection/migration at the Farnsworth Enhanced Oil Recovery (EOR) field, in partnership with the industrial partner Chaparral Energy. The project is to inject a million tons of carbon dioxide into the target formation, the deep oil-bearing Morrow Formation in the Farnsworth Unit EOR field. Quantitative time-lapse seismic monitoring has the potential to track CO2 movement in geologic carbon storage sites. Los Alamos National Laboratory (LANL) has recently developed new full-waveform inversion methods to jointly invert time-lapse seismic data for changes in elastic and anisotropic parameters in target monitoring regions such as a CO2 reservoir. We apply our new joint inversion methods to time-lapse VSP data acquired at the Farnsworth EOR filed, and present some preliminary results showing geophysical properties changes in the reservoir.

  14. Attenuation and velocity dispersion in the exploration seismic frequency band

    Science.gov (United States)

    Sun, Langqiu

    In an anelastic medium, seismic waves are distorted by attenuation and velocity dispersion, which depend on petrophysical properties of reservoir rocks. The effective attenuation and velocity dispersion is a combination of intrinsic attenuation and apparent attenuation due to scattering, transmission response, and data acquisition system. Velocity dispersion is usually neglected in seismic data processing partly because of insufficient observations in the exploration seismic frequency band. This thesis investigates the methods of measuring velocity dispersion in the exploration seismic frequency band and interprets the velocity dispersion data in terms of petrophysical properties. Broadband, uncorrelated vibrator data are suitable for measuring velocity dispersion in the exploration seismic frequency band, and a broad bandwidth optimizes the observability of velocity dispersion. Four methods of measuring velocity dispersion in uncorrelated vibrator VSP data are investigated, which are the sliding window crosscorrelation (SWCC) method, the instantaneous phase method, the spectral decomposition method, and the cross spectrum method. Among them, the SWCC method is a new method and has satisfactory robustness, accuracy, and efficiency. Using the SWCC method, velocity dispersion is measured in the uncorrelated vibrator VSP data from three areas with different geological settings, i.e., Mallik gas hydrate zone, McArthur River uranium mines, and Outokumpu crystalline rocks. The observed velocity dispersion is fitted to a straight line with respect to log frequency for a constant (frequency-independent) Q value. This provides an alternative method for calculating Q. A constant Q value does not directly link to petrophysical properties. A modeling study is implemented for the Mallik and McArthur River data to interpret the velocity dispersion observations in terms of petrophysical properties. The detailed multi-parameter petrophysical reservoir models are built according to

  15. The SCEC Unified Community Velocity Model (UCVM) Software Framework for Distributing and Querying Seismic Velocity Models

    Science.gov (United States)

    Maechling, P. J.; Taborda, R.; Callaghan, S.; Shaw, J. H.; Plesch, A.; Olsen, K. B.; Jordan, T. H.; Goulet, C. A.

    2017-12-01

    Crustal seismic velocity models and datasets play a key role in regional three-dimensional numerical earthquake ground-motion simulation, full waveform tomography, modern physics-based probabilistic earthquake hazard analysis, as well as in other related fields including geophysics, seismology, and earthquake engineering. The standard material properties provided by a seismic velocity model are P- and S-wave velocities and density for any arbitrary point within the geographic volume for which the model is defined. Many seismic velocity models and datasets are constructed by synthesizing information from multiple sources and the resulting models are delivered to users in multiple file formats, such as text files, binary files, HDF-5 files, structured and unstructured grids, and through computer applications that allow for interactive querying of material properties. The Southern California Earthquake Center (SCEC) has developed the Unified Community Velocity Model (UCVM) software framework to facilitate the registration and distribution of existing and future seismic velocity models to the SCEC community. The UCVM software framework is designed to provide a standard query interface to multiple, alternative velocity models, even if the underlying velocity models are defined in different formats or use different geographic projections. The UCVM framework provides a comprehensive set of open-source tools for querying seismic velocity model properties, combining regional 3D models and 1D background models, visualizing 3D models, and generating computational models in the form of regular grids or unstructured meshes that can be used as inputs for ground-motion simulations. The UCVM framework helps researchers compare seismic velocity models and build equivalent simulation meshes from alternative velocity models. These capabilities enable researchers to evaluate the impact of alternative velocity models in ground-motion simulations and seismic hazard analysis applications

  16. TimeLapseAnalyzer: Multi-target analysis for live-cell imaging and time-lapse microscopy

    DEFF Research Database (Denmark)

    Huth, Johannes; Buchholz, Malte; Kraus, Johann M.

    2011-01-01

    The direct observation of cells over time using time-lapse microscopy can provide deep insights into many important biological processes. Reliable analyses of motility, proliferation, invasive potential or mortality of cells are essential to many studies involving live cell imaging and can aid in...... counting and tube formation analysis in high throughput screening of live-cell experiments. TimeLapseAnalyzer is freely available (MATLAB, Open Source) at http://www.informatik.uniulm. de/ni/mitarbeiter/HKestler/tla......., we developed TimeLapseAnalyzer. Apart from general purpose image enhancements and segmentation procedures, this extensible, self-contained, modular cross-platform package provides dedicated modalities for fast and reliable analysis of multi-target cell tracking, scratch wound healing analysis, cell...

  17. Time-lapse controlled-source electromagnetics using interferometry

    NARCIS (Netherlands)

    Hunziker, J.W.; Slob, E.C.; Wapenaar, C.P.A.

    In time-lapse controlled-source electromagnetics, it is crucial that the source and the receivers are positioned at exactly the same location at all times of measurement. We use interferometry by multidimensional deconvolution (MDD) to overcome problems in repeatability of the source location.

  18. The Use Of Seismic Velocities For The Prediction Of Abnormal ...

    African Journals Online (AJOL)

    Ninety (90) velocity control points derived from seismic data processing were examined and analyzed to evaluate abnormal pressure zones in parts of onshore western Niger - Delta. Compaction trend graphs and a map showing the distribution of top of overpressure were produced. The graphs show that compaction ...

  19. Calibrating vadose zone models with time-lapse gravity data

    DEFF Research Database (Denmark)

    Christiansen, Lars; Binning, Philip John; Rosbjerg, Dan

    2011-01-01

    The vadose zone plays an important role in the hydrologic cycle. Various geophysical methods can determine soil water content variations in time and space in volumes ranging from a few cubic centimeters to several cubic meters. In contrast to the established methods, time-lapse gravity measurements...... of changes in soil water content do not rely on a petrophysical relationship between the measured quantity and the water content but give a direct measure of the mass change in the soil. Only recently has the vadose zone been systematically incorporated when ground-based gravity data are used to infer...... hydrologic information. In this study, changes in the soil water content gave rise to a measurable signal in a forced infiltration experiment on a 107-m2 grassland area. Time-lapse gravity data were able to constrain the van Genuchten soil hydraulic parameters in both a synthetic example and a field...

  20. Definition of "banner clouds" based on time lapse movies

    Directory of Open Access Journals (Sweden)

    J. H. Schween

    2007-01-01

    Full Text Available Banner clouds appear on the leeward side of a mountain and resemble a banner or a flag. This article provides a comprehensive definition of "banner clouds". It is based primarily on an extensive collection of time lapse movies, but previous attempts at an explanation of this phenomenon are also taken into account. The following ingredients are considered essential: the cloud must be attached to the mountain but not appear on the windward side; the cloud must originate from condensation of water vapour contained in the air (rather than consist of blowing snow; the cloud must be persistent; and the cloud must not be of convective nature. The definition is illustrated and discussed with the help of still images and time lapse movies taken at Mount Zugspitze in the Bavarian Alps.

  1. Definition of "banner clouds" based on time lapse movies

    OpenAIRE

    Schween , J. H.; Kuettner , J.; Reinert , D.; Reuder , J.; Wirth , V.

    2007-01-01

    International audience; Banner clouds appear on the leeward side of a mountain and resemble a banner or a flag. This article provides a comprehensive definition of "banner clouds". It is based primarily on an extensive collection of time lapse movies, but previous attempts at an explanation of this phenomenon are also taken into account. The following ingredients are considered essential: the cloud must be attached to the mountain but not appear on the windward side; the cloud must originate ...

  2. Time-lapse Raman imaging of osteoblast differentiation

    Science.gov (United States)

    Hashimoto, Aya; Yamaguchi, Yoshinori; Chiu, Liang-Da; Morimoto, Chiaki; Fujita, Katsumasa; Takedachi, Masahide; Kawata, Satoshi; Murakami, Shinya; Tamiya, Eiichi

    2015-07-01

    Osteoblastic mineralization occurs during the early stages of bone formation. During this mineralization, hydroxyapatite (HA), a major component of bone, is synthesized, generating hard tissue. Many of the mechanisms driving biomineralization remain unclear because the traditional biochemical assays used to investigate them are destructive techniques incompatible with viable cells. To determine the temporal changes in mineralization-related biomolecules at mineralization spots, we performed time-lapse Raman imaging of mouse osteoblasts at a subcellular resolution throughout the mineralization process. Raman imaging enabled us to analyze the dynamics of the related biomolecules at mineralization spots throughout the entire process of mineralization. Here, we stimulated KUSA-A1 cells to differentiate into osteoblasts and conducted time-lapse Raman imaging on them every 4 hours for 24 hours, beginning 5 days after the stimulation. The HA and cytochrome c Raman bands were used as markers for osteoblastic mineralization and apoptosis. From the Raman images successfully acquired throughout the mineralization process, we found that β-carotene acts as a biomarker that indicates the initiation of osteoblastic mineralization. A fluctuation of cytochrome c concentration, which indicates cell apoptosis, was also observed during mineralization. We expect time-lapse Raman imaging to help us to further elucidate osteoblastic mineralization mechanisms that have previously been unobservable.

  3. Iterative reflectivity-constrained velocity estimation for seismic imaging

    Science.gov (United States)

    Masaya, Shogo; Verschuur, D. J. Eric

    2018-03-01

    This paper proposes a reflectivity constraint for velocity estimation to optimally solve the inverse problem for active seismic imaging. This constraint is based on the velocity model derived from the definition of reflectivity and acoustic impedance. The constraint does not require any prior information of the subsurface and large extra computational costs, like the calculation of so-called Hessian matrices. We incorporate this constraint into the Joint Migration Inversion algorithm, which simultaneously estimates both the reflectivity and velocity model of the subsurface in an iterative process. Using so-called full wavefield modeling, the misfit between forward modeled and measured data is minimized. Numerical and field data examples are given to demonstrate the validity of our proposed algorithm in case accurate initial models and the low frequency components of observed seismic data are absent.

  4. Peak Ground Velocities for Seismic Events at Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    K. Coppersmith; R. Quittmeyer

    2005-01-01

    This report describes a scientific analysis to bound credible horizontal peak ground velocities (PGV) for the repository waste emplacement level at Yucca Mountain. Results are presented as a probability distribution for horizontal PGV to represent uncertainties in the analysis. The analysis also combines the bound to horizontal PGV with results of ground motion site-response modeling (BSC 2004 [DIRS 170027]) to develop a composite hazard curve for horizontal PGV at the waste emplacement level. This result provides input to an abstraction of seismic consequences (BSC 2004 [DIRS 169183]). The seismic consequence abstraction, in turn, defines the input data and computational algorithms for the seismic scenario class of the total system performance assessment (TSPA). Planning for the analysis is documented in Technical Work Plan TWP-MGR-GS-000001 (BSC 2004 [DIRS 171850]). The bound on horizontal PGV at the repository waste emplacement level developed in this analysis complements ground motions developed on the basis of PSHA results. In the PSHA, ground motion experts characterized the epistemic uncertainty and aleatory variability in their ground motion interpretations. To characterize the aleatory variability they used unbounded lognormal distributions. As a consequence of these characterizations, as seismic hazard calculations are extended to lower and lower annual frequencies of being exceeded, the ground motion level increases without bound, eventually reaching levels that are not credible (Corradini 2003 [DIRS 171191]). To provide credible seismic inputs for TSPA, in accordance with 10 Code of Federal Regulations (CFR) 63.102(j) [DIRS 156605], this complementary analysis is carried out to determine reasonable bounding values of horizontal PGV at the waste emplacement level for annual frequencies of exceedance as low as 10 -8 . For each realization of the TSPA seismic scenario, the results of this analysis provide a constraint on the values sampled from the

  5. A software solution for recording circadian oscillator features in time-lapse live cell microscopy

    Directory of Open Access Journals (Sweden)

    Salmon Patrick

    2010-07-01

    Full Text Available Abstract Background Fluorescent and bioluminescent time-lapse microscopy approaches have been successfully used to investigate molecular mechanisms underlying the mammalian circadian oscillator at the single cell level. However, most of the available software and common methods based on intensity-threshold segmentation and frame-to-frame tracking are not applicable in these experiments. This is due to cell movement and dramatic changes in the fluorescent/bioluminescent reporter protein during the circadian cycle, with the lowest expression level very close to the background intensity. At present, the standard approach to analyze data sets obtained from time lapse microscopy is either manual tracking or application of generic image-processing software/dedicated tracking software. To our knowledge, these existing software solutions for manual and automatic tracking have strong limitations in tracking individual cells if their plane shifts. Results In an attempt to improve existing methodology of time-lapse tracking of a large number of moving cells, we have developed a semi-automatic software package. It extracts the trajectory of the cells by tracking theirs displacements, makes the delineation of cell nucleus or whole cell, and finally yields measurements of various features, like reporter protein expression level or cell displacement. As an example, we present here single cell circadian pattern and motility analysis of NIH3T3 mouse fibroblasts expressing a fluorescent circadian reporter protein. Using Circadian Gene Express plugin, we performed fast and nonbiased analysis of large fluorescent time lapse microscopy datasets. Conclusions Our software solution, Circadian Gene Express (CGE, is easy to use and allows precise and semi-automatic tracking of moving cells over longer period of time. In spite of significant circadian variations in protein expression with extremely low expression levels at the valley phase, CGE allows accurate and

  6. A software solution for recording circadian oscillator features in time-lapse live cell microscopy.

    Science.gov (United States)

    Sage, Daniel; Unser, Michael; Salmon, Patrick; Dibner, Charna

    2010-07-06

    Fluorescent and bioluminescent time-lapse microscopy approaches have been successfully used to investigate molecular mechanisms underlying the mammalian circadian oscillator at the single cell level. However, most of the available software and common methods based on intensity-threshold segmentation and frame-to-frame tracking are not applicable in these experiments. This is due to cell movement and dramatic changes in the fluorescent/bioluminescent reporter protein during the circadian cycle, with the lowest expression level very close to the background intensity. At present, the standard approach to analyze data sets obtained from time lapse microscopy is either manual tracking or application of generic image-processing software/dedicated tracking software. To our knowledge, these existing software solutions for manual and automatic tracking have strong limitations in tracking individual cells if their plane shifts. In an attempt to improve existing methodology of time-lapse tracking of a large number of moving cells, we have developed a semi-automatic software package. It extracts the trajectory of the cells by tracking theirs displacements, makes the delineation of cell nucleus or whole cell, and finally yields measurements of various features, like reporter protein expression level or cell displacement. As an example, we present here single cell circadian pattern and motility analysis of NIH3T3 mouse fibroblasts expressing a fluorescent circadian reporter protein. Using Circadian Gene Express plugin, we performed fast and nonbiased analysis of large fluorescent time lapse microscopy datasets. Our software solution, Circadian Gene Express (CGE), is easy to use and allows precise and semi-automatic tracking of moving cells over longer period of time. In spite of significant circadian variations in protein expression with extremely low expression levels at the valley phase, CGE allows accurate and efficient recording of large number of cell parameters, including

  7. SEISMIC VELOCITY DETERMINATION IN GRAVEL AND SANDS USING PIEZOCRYSTALS

    Directory of Open Access Journals (Sweden)

    Santamarina Juan Carlos

    2008-06-01

    Full Text Available The exact determination of seismic waves' propagation velocities has great importance in the geotechnics due to from that it is possible to determine, among other parameters, the dynamic ones: Elasticity E, Rigidity G, Poisson !, compressibility B; as well as to reach a knowledge on the stress-strain behavior for the studied soil samples. The seismic waves transmission considered in tests at laboratory scale carried out in the present work is a phenomenon that produces very small deformation, and so doesn't disturb the material. This allows
    to apply the results in a more general scale to study the behavior of soils in situ and to predict their answer to stress.
    With the purpose to study the response of particulate material subjected to seismic excitements at small scale, samples of gravels and sands were successively introduced in an odometric cell, exciting them with impulsive signals and registering the corresponding seismograms through general purpose piezoelectric transducers embedded in ends of the cell.
    The distance source-receiver was interval increased, which enabled, from the corresponding regression straight lines, to calculate in precise form the propagation velocities (for P waves.
    The tests were carried out in samples of dry alluvial soil with three different grain sizes. The respective frequency spectra of the signals were determined for two packing modes: loose and compact, what added information on the medium characteristics.

  8. Time-lapse video sysem used to study nesting gyrfalcons

    Science.gov (United States)

    Booms, Travis; Fuller, Mark R.

    2003-01-01

    We used solar-powered time-lapse video photography to document nesting Gyrfalcon (Falco rusticolus) food habits in central West Greenland from May to July in 2000 and 2001. We collected 2677.25 h of videotape from three nests, representing 94, 87, and 49% of the nestling period at each nest. The video recorded 921 deliveries of 832 prey items. We placed 95% of the items into prey categories. The image quality was good but did not reveal enough detail to identify most passerines to species. We found no evidence that Gyrfalcons were negatively affected by the video system after the initial camera set-up. The video system experienced some mechanical problems but proved reliable. The system likely can be used to effectively document the food habits and nesting behavior of other birds, especially those delivering large prey to a nest or other frequently used site.

  9. Calibrating Vadose Zone Models with Time-Lapse Gravity Data

    DEFF Research Database (Denmark)

    Christiansen, Lars; Hansen, A. B.; Looms, M. C.

    2009-01-01

    A change in soil water content is a change in mass stored in the subsurface. Given that the mass change is big enough, the change can be measured with a gravity meter. Attempts have been made with varying success over the last decades to use ground-based time-lapse gravity measurements to infer...... hydrogeological parameters. These studies focused on the saturated zone with specific yield as the most prominent target parameter. Any change in storage in the vadose zone has been considered as noise. Our modeling results show a measureable change in gravity from the vadose zone during a forced infiltration...... experiment on 10m by 10m grass land. Simulation studies show a potential for vadose zone model calibration using gravity data in conjunction with other geophysical data, e.g. cross-borehole georadar. We present early field data and calibration results from a forced infiltration experiment conducted over 30...

  10. Combined time-lapse cinematography and immuno-electron microscopy.

    Science.gov (United States)

    Balfour, B M; Goscicka, T; MacKenzie, J L; Gautam, A; Tate, M; Clark, J

    1990-04-01

    A method was developed to record interactions between mobile non-adherent immunocytes by time-lapse cinematography and then to study the same cells by immuno-electron microscopy, using monoclonal antibodies against surface components. For this purpose a modified stage was designed to fit an inverted microscope. The attachment included a device to cool the culture chamber with N2 gas, a micro-injector for monoclonal antibody and immuno-gold treatment, and two pairs of washing needles to change the medium without disturbance. The technique was first employed to study the formation of aggregates around the antigen-presenting cells in cultures containing cells from hyper-immunized animals. Recently peripheral blood cells from normal subjects and patients with immune deficiency syndromes were stimulated with pokeweed mitogen, cluster formation was recorded, and the cells were processed for immuno-electron microscopy.

  11. A Prototype System for Time-Lapse Electrical Resistivity Tomographies

    Directory of Open Access Journals (Sweden)

    Raffaele Luongo

    2012-01-01

    Full Text Available A prototype system for time-lapse acquisition of 2D electrical resistivity tomography (ERT and time domain reflectometry (TDR measurements was installed in a test site affected by a landslide in Basilicata region (southern Italy. The aim of the system is to monitor in real-time the rainwater infiltration into the soil and obtain information about the variation of the water content in the first layers of the subsoil and the possible influence of this variation on landslide activity. A rain gauge placed in the test site gives information on the rainfall intensity and frequency and suggests the acquisition time interval. The installed system and the preliminary results are presented in this paper.

  12. Embryo selection: the role of time-lapse monitoring.

    Science.gov (United States)

    Kovacs, Peter

    2014-12-15

    In vitro fertilization has been available for over 3 decades. Its use is becoming more widespread worldwide, and in the developed world, up to 5% of children have been born following IVF. It is estimated that over 5 million children have been conceived in vitro. In addition to giving hope to infertile couples to have their own family, in vitro fertilization has also introduced risks as well. The risk of multiple gestation and the associated maternal and neonatal morbidity/mortality has increased significantly over the past few decades. While stricter transfer policies have eliminated the majority of the high-order multiples, these changes have not yet had much of an impact on the incidence of twins. A twin pregnancy can be avoided by the transfer of a single embryo only. However, the traditionally used method of morphologic embryo selection is not predictive enough to allow routine single embryo transfer; therefore, new screening tools are needed. Time-lapse embryo monitoring allows continuous, non-invasive embryo observation without the need to remove the embryo from optimal culturing conditions. The extra information on the cleavage pattern, morphologic changes and embryo development dynamics could help us identify embryos with a higher implantation potential. These technologic improvements enable us to objectively select the embryo(s) for transfer based on certain algorithms. In the past 5-6 years, numerous studies have been published that confirmed the safety of time-lapse technology. In addition, various markers have already been identified that are associated with the minimal likelihood of implantation and others that are predictive of blastocyst development, implantation potential, genetic health and pregnancy. Various groups have proposed different algorithms for embryo selection based on mostly retrospective data analysis. However, large prospective trials are needed to study the full benefit of these (and potentially new) algorithms before their

  13. Seismic wave attenuation and velocity dispersion in UAE carbonates

    Science.gov (United States)

    Ogunsami, Abdulwaheed Remi

    Interpreting the seismic property of fluids in hydrocarbon reservoirs at low frequency scale has been a cherished goal of petroleum geophysics research for decades. Lately, there has been tremendous interest in understanding attenuation as a result of fluid flow in porous media. Although interesting, the emerging experimental and theoretical information still remain ambiguous and are practically not utilized for reasons not too obscure. Attenuation is frequency dependent and hard to measure in the laboratory at low frequency. This thesis describes and reports the results of an experimental study of low frequency attenuation and velocity dispersion on a selected carbonate reservoir samples in the United Arab Emirates (UAE). For the low frequency measurements, stress-strain method was used to measure the moduli from which the velocity is derived. Attenuation was measured as the phase difference between the applied stress and the strain. For the ultrasonic component, the pulse propagation method was employed. To study the fluid effect especially at reservoir in situ conditions, the measurements were made dry and saturated with liquid butane and brine at differential pressures of up to 5000 psi with pore pressure held constant at 500 psi. Similarly to what has been documented in the literatures for sandstone, attenuation of the bulk compressibility mode dominates the losses in these dry and somewhat partially saturated carbonate samples with butane and brine. Overall, the observed attenuation cannot be simply said to be frequency dependent within this low seismic band. While attenuation seems to be practically constant in the low frequency band for sample 3H, such conclusion cannot be made for sample 7H. For the velocities, significant dispersion is observed and Gassmann generally fails to match the measured velocities. Only the squirt model fairly fits the velocities, but not at all pressures. Although the observed dispersion is larger than Biot's prediction, the fact

  14. 3-D seismic velocity and attenuation structures in the geothermal field

    Energy Technology Data Exchange (ETDEWEB)

    Nugraha, Andri Dian [Global Geophysics Research Group, Faculty of Mining and Petroleum Engineering, Institute of Technology Bandung, Jalan Ganesha No. 10 Bandung, 40132 (Indonesia); Syahputra, Ahmad [Geophyisical Engineering, Faculty of Mining and Petroleum Engineering, Institute of Technology Bandung, Jalan Ganesha No. 10 Bandung, 40132 (Indonesia); Fatkhan,; Sule, Rachmat [Applied Geophysics Research Group, Faculty of Mining and Petroleum Engineering, Institute of Technology Bandung, Jalan Ganesha No. 10 Bandung, 40132 (Indonesia)

    2013-09-09

    We conducted delay time tomography to determine 3-D seismic velocity structures (Vp, Vs, and Vp/Vs ratio) using micro-seismic events in the geothermal field. The P-and S-wave arrival times of these micro-seismic events have been used as input for the tomographic inversion. Our preliminary seismic velocity results show that the subsurface condition of geothermal field can be fairly delineated the characteristic of reservoir. We then extended our understanding of the subsurface physical properties through determining of attenuation structures (Qp, Qs, and Qs/Qp ratio) using micro-seismic waveform. We combined seismic velocities and attenuation structures to get much better interpretation of the reservoir characteristic. Our preliminary attanuation structures results show reservoir characterization can be more clearly by using the 3-D attenuation model of Qp, Qs, and Qs/Qp ratio combined with 3-D seismic velocity model of Vp, Vs, and Vp/Vs ratio.

  15. Network Analysis of Time-Lapse Microscopy Recordings

    Directory of Open Access Journals (Sweden)

    Erik eSmedler

    2014-09-01

    Full Text Available Multicellular organisms rely on intercellular communication to regulate important cellular processes critical to life. To further our understanding of those processes there is a need to scrutinize dynamical signaling events and their functions in both cells and organisms. Here, we report a method and provide MATLAB code that analyzes time-lapse microscopy recordings to identify and characterize network structures within large cell populations, such as interconnected neurons. The approach is demonstrated using intracellular calcium (Ca2+ recordings in neural progenitors and cardiac myocytes, but could be applied to a wide variety of biosensors employed in diverse cell types and organisms. In this method, network structures are analyzed by applying cross-correlation signal processing and graph theory to single-cell recordings. The goal of the analysis is to determine if the single cell activity constitutes a network of interconnected cells and to decipher the properties of this network. The method can be applied in many fields of biology in which biosensors are used to monitor signaling events in living cells. Analyzing intercellular communication in cell ensembles can reveal essential network structures that provide important biological insights.

  16. Assessing Uncertainty and Repeatability in Time-Lapse VSP Monitoring of CO2 Injection in a Brine Aquifer, Frio Formation, Texas (A Case Study)

    Energy Technology Data Exchange (ETDEWEB)

    Nazari, Siamak [Univ. of California, Berkeley, CA (United States). Dept. of Civil and Environmental Engineering; Daley, Thomas M. [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Earth Sciences Division

    2013-02-07

    This study was done to assess the repeatability and uncertainty of time-lapse VSP response to CO2 injection in the Frio formation near Houston Texas. A work flow was built to assess the effect of time-lapse injected CO2 into two Frio brine reservoir intervals, the ‘C’ sand (Frio1) and the ‘Blue sand’ (Frio2). The time-lapse seismic amplitude variations with sensor depth for both reservoirs Frio1 and Frio2 were computed by subtracting the seismic response of the base survey from each of the two monitor seismic surveys. Source site 1 has been considered as one of the best sites for evaluating the time-lapse response after injection. For site 1, the computed timelapse NRMS levels after processing had been compared to the estimated time-lapse NRMS level before processing for different control reflectors, and for brine aquifers Frio1, and Frio2 to quantify detectability of amplitude difference. As the main interest is to analyze the time-lapse amplitude variations, different scenarios have been considered. Three different survey scenarios were considered: the base survey which was performed before injection, monitor1 performed after the first injection operation, and monitor2 which was after the second injection. The first scenario was base-monitor1, the second was basemonitor2, and the third was monitor1-monitor2. We considered three ‘control’ reflections above the Frio to assist removal of overburden changes, and concluded that third control reflector (CR3) is the most favorable for the first scenario in terms of NRMS response, and first control reflector (CR1) is the most favorable for the second and third scenarios in terms of NRMS response. The NRMS parameter is shown to be a useful measure to assess the effect of processing on time-lapse data. The overall NRMS for the Frio VSP data set was found to be in the range of 30% to 80% following basic processing. This could be considered as an estimated baseline in assessing the utility

  17. Monitoring Seismic Velocity Change to Explore the Earthquake Seismogenic Structures

    Science.gov (United States)

    Liao, C. F.; Wen, S.; Chen, C.

    2017-12-01

    Studying spatial-temporal variations of subsurface velocity structures is still a challenge work, but it can provide important information not only on geometry of a fault, but also the rheology change induced from the strong earthquake. In 1999, a disastrous Chi-Chi earthquake (Mw7.6; Chi-Chi EQ) occurred in central Taiwan and caused great impacts on Taiwan's society. Therefore, the major objective of this research is to investigate whether the rheology change of fault can be associated with seismogenic process before strong earthquake. In addition, after the strike of the Chi-Chi EQ, whether the subsurface velocity structure resumes to its steady state is another issue in this study. Therefore, for the above purpose, we have applied a 3D tomographic technique to obtain P- and S-wave velocity structures in central Taiwan using travel time data provided by the Central Weather Bureau (CWB). One major advantage of this method is that we can include out-of-network data to improve the resolution of velocity structures at deeper depths in our study area. The results show that the temporal variations of Vp are less significant than Vs (or Vp/Vs ratio), and Vp is not prominent perturbed before and after the occurrence of the Chi-Chi EQ. However, the Vs (or Vp/Vs ratio) structure in the source area demonstrates significant spatial-temporal difference before and after the mainshock. From the results, before the mainshock, Vs began to decrease (Vp/Vs ratio was increased as well) at the hanging wall of Chelungpu fault, which may be induced by the increasing density of microcracks and fluid. But in the vicinities of Chi-Chi Earthquake's source area, Vs was increasing (Vp/Vs ratio was also decreased). This phenomenon may be owing to the closing of cracks or migration of fluid. Due to the different physical characteristics around the source area, strong earthquake may be easily nucleated at the junctional zone. Our findings suggest that continuously monitoring the Vp and Vs (or

  18. Low-cost motility tracking system (LOCOMOTIS for time-lapse microscopy applications and cell visualisation.

    Directory of Open Access Journals (Sweden)

    Adam E Lynch

    Full Text Available Direct visualisation of cells for the purpose of studying their motility has typically required expensive microscopy equipment. However, recent advances in digital sensors mean that it is now possible to image cells for a fraction of the price of a standard microscope. Along with low-cost imaging there has also been a large increase in the availability of high quality, open-source analysis programs. In this study we describe the development and performance of an expandable cell motility system employing inexpensive, commercially available digital USB microscopes to image various cell types using time-lapse and perform tracking assays in proof-of-concept experiments. With this system we were able to measure and record three separate assays simultaneously on one personal computer using identical microscopes, and obtained tracking results comparable in quality to those from other studies that used standard, more expensive, equipment. The microscopes used in our system were capable of a maximum magnification of 413.6×. Although resolution was lower than that of a standard inverted microscope we found this difference to be indistinguishable at the magnification chosen for cell tracking experiments (206.8×. In preliminary cell culture experiments using our system, velocities (mean µm/min ± SE of 0.81 ± 0.01 (Biomphalaria glabrata hemocytes on uncoated plates, 1.17 ± 0.004 (MDA-MB-231 breast cancer cells, 1.24 ± 0.006 (SC5 mouse Sertoli cells and 2.21 ± 0.01 (B. glabrata hemocytes on Poly-L-Lysine coated plates, were measured and are consistent with previous reports. We believe that this system, coupled with open-source analysis software, demonstrates that higher throughput time-lapse imaging of cells for the purpose of studying motility can be an affordable option for all researchers.

  19. Low-cost motility tracking system (LOCOMOTIS) for time-lapse microscopy applications and cell visualisation.

    Science.gov (United States)

    Lynch, Adam E; Triajianto, Junian; Routledge, Edwin

    2014-01-01

    Direct visualisation of cells for the purpose of studying their motility has typically required expensive microscopy equipment. However, recent advances in digital sensors mean that it is now possible to image cells for a fraction of the price of a standard microscope. Along with low-cost imaging there has also been a large increase in the availability of high quality, open-source analysis programs. In this study we describe the development and performance of an expandable cell motility system employing inexpensive, commercially available digital USB microscopes to image various cell types using time-lapse and perform tracking assays in proof-of-concept experiments. With this system we were able to measure and record three separate assays simultaneously on one personal computer using identical microscopes, and obtained tracking results comparable in quality to those from other studies that used standard, more expensive, equipment. The microscopes used in our system were capable of a maximum magnification of 413.6×. Although resolution was lower than that of a standard inverted microscope we found this difference to be indistinguishable at the magnification chosen for cell tracking experiments (206.8×). In preliminary cell culture experiments using our system, velocities (mean µm/min ± SE) of 0.81 ± 0.01 (Biomphalaria glabrata hemocytes on uncoated plates), 1.17 ± 0.004 (MDA-MB-231 breast cancer cells), 1.24 ± 0.006 (SC5 mouse Sertoli cells) and 2.21 ± 0.01 (B. glabrata hemocytes on Poly-L-Lysine coated plates), were measured and are consistent with previous reports. We believe that this system, coupled with open-source analysis software, demonstrates that higher throughput time-lapse imaging of cells for the purpose of studying motility can be an affordable option for all researchers.

  20. Low-Cost Motility Tracking System (LOCOMOTIS) for Time-Lapse Microscopy Applications and Cell Visualisation

    Science.gov (United States)

    Lynch, Adam E.; Triajianto, Junian; Routledge, Edwin

    2014-01-01

    Direct visualisation of cells for the purpose of studying their motility has typically required expensive microscopy equipment. However, recent advances in digital sensors mean that it is now possible to image cells for a fraction of the price of a standard microscope. Along with low-cost imaging there has also been a large increase in the availability of high quality, open-source analysis programs. In this study we describe the development and performance of an expandable cell motility system employing inexpensive, commercially available digital USB microscopes to image various cell types using time-lapse and perform tracking assays in proof-of-concept experiments. With this system we were able to measure and record three separate assays simultaneously on one personal computer using identical microscopes, and obtained tracking results comparable in quality to those from other studies that used standard, more expensive, equipment. The microscopes used in our system were capable of a maximum magnification of 413.6×. Although resolution was lower than that of a standard inverted microscope we found this difference to be indistinguishable at the magnification chosen for cell tracking experiments (206.8×). In preliminary cell culture experiments using our system, velocities (mean µm/min ± SE) of 0.81±0.01 (Biomphalaria glabrata hemocytes on uncoated plates), 1.17±0.004 (MDA-MB-231 breast cancer cells), 1.24±0.006 (SC5 mouse Sertoli cells) and 2.21±0.01 (B. glabrata hemocytes on Poly-L-Lysine coated plates), were measured and are consistent with previous reports. We believe that this system, coupled with open-source analysis software, demonstrates that higher throughput time-lapse imaging of cells for the purpose of studying motility can be an affordable option for all researchers. PMID:25121722

  1. Quantifying Effusion Rates at Active Volcanoes through Integrated Time-Lapse Laser Scanning and Photography

    Directory of Open Access Journals (Sweden)

    Neil Slatcher

    2015-11-01

    Full Text Available During volcanic eruptions, measurements of the rate at which magma is erupted underpin hazard assessments. For eruptions dominated by the effusion of lava, estimates are often made using satellite data; here, in a case study at Mount Etna (Sicily, we make the first measurements based on terrestrial laser scanning (TLS, and we also include explosive products. During the study period (17–21 July 2012, regular Strombolian explosions were occurring within the Bocca Nuova crater, producing a ~50 m-high scoria cone and a small lava flow field. TLS surveys over multi-day intervals determined a mean cone growth rate (effusive and explosive products of ~0.24 m3·s−1. Differences between 0.3-m resolution DEMs acquired at 10-minute intervals captured the evolution of a breakout lava flow lobe advancing at 0.01–0.03 m3·s−1. Partial occlusion within the crater prevented similar measurement of the main flow, but integrating TLS data with time-lapse imagery enabled lava viscosity (7.4 × 105 Pa·s to be derived from surface velocities and, hence, a flux of 0.11 m3·s−1 to be calculated. Total dense rock equivalent magma discharge estimates are ~0.1–0.2 m3·s−1 over the measurement period and suggest that simultaneous estimates from satellite data are somewhat overestimated. Our results support the use of integrated TLS and time-lapse photography for ground-truthing space-based measurements and highlight the value of interactive image analysis when automated approaches, such as particle image velocimetry (PIV, fail.

  2. Exploring Time-Lapse Photography as a Means for Qualitative Data Collection

    Science.gov (United States)

    Persohn, Lindsay

    2015-01-01

    Collecting information via time-lapse photography is nothing new. Scientists and artists have been using this kind of data since the late 1800s. However, my research and experiments with time-lapse have shown that great potential may lie in its application to educational and social scientific research methods. This article is part history, part…

  3. Capturing change: the duality of time-lapse imagery to acquire data and depict ecological dynamics

    Science.gov (United States)

    Brinley Buckley, Emma M.; Allen, Craig R.; Forsberg, Michael; Farrell, Michael; Caven, Andrew J.

    2017-01-01

    We investigate the scientific and communicative value of time-lapse imagery by exploring applications for data collection and visualization. Time-lapse imagery has a myriad of possible applications to study and depict ecosystems and can operate at unique temporal and spatial scales to bridge the gap between large-scale satellite imagery projects and observational field research. Time-lapse data sequences, linking time-lapse imagery with data visualization, have the ability to make data come alive for a wider audience by connecting abstract numbers to images that root data in time and place. Utilizing imagery from the Platte Basin Timelapse Project, water inundation and vegetation phenology metrics are quantified via image analysis and then paired with passive monitoring data, including streamflow and water chemistry. Dynamic and interactive time-lapse data sequences elucidate the visible and invisible ecological dynamics of a significantly altered yet internationally important river system in central Nebraska.

  4. Capturing change: the duality of time-lapse imagery to acquire data and depict ecological dynamics

    Directory of Open Access Journals (Sweden)

    Emma M. Brinley Buckley

    2017-09-01

    Full Text Available We investigate the scientific and communicative value of time-lapse imagery by exploring applications for data collection and visualization. Time-lapse imagery has a myriad of possible applications to study and depict ecosystems and can operate at unique temporal and spatial scales to bridge the gap between large-scale satellite imagery projects and observational field research. Time-lapse data sequences, linking time-lapse imagery with data visualization, have the ability to make data come alive for a wider audience by connecting abstract numbers to images that root data in time and place. Utilizing imagery from the Platte Basin Timelapse Project, water inundation and vegetation phenology metrics are quantified via image analysis and then paired with passive monitoring data, including streamflow and water chemistry. Dynamic and interactive time-lapse data sequences elucidate the visible and invisible ecological dynamics of a significantly altered yet internationally important river system in central Nebraska.

  5. Excavatability Assessment of Weathered Sedimentary Rock Mass Using Seismic Velocity Method

    International Nuclear Information System (INIS)

    Bin Mohamad, Edy Tonnizam; Noor, Muhazian Md; Isa, Mohamed Fauzi Bin Md.; Mazlan, Ain Naadia; Saad, Rosli

    2010-01-01

    Seismic refraction method is one of the most popular methods in assessing surface excavation. The main objective of the seismic data acquisition is to delineate the subsurface into velocity profiles as different velocity can be correlated to identify different materials. The physical principal used for the determination of excavatability is that seismic waves travel faster through denser material as compared to less consolidated material. In general, a lower velocity indicates material that is soft and a higher velocity indicates more difficult to be excavated. However, a few researchers have noted that seismic velocity method alone does not correlate well with the excavatability of the material. In this study, a seismic velocity method was used in Nusajaya, Johor to assess the accuracy of this seismic velocity method with excavatability of the weathered sedimentary rock mass. A direct ripping run by monitoring the actual production of ripping has been employed at later stage and compared to the ripper manufacturer's recommendation. This paper presents the findings of the seismic velocity tests in weathered sedimentary area. The reliability of using this method with the actual rippability trials is also presented.

  6. Excavatability Assessment of Weathered Sedimentary Rock Mass Using Seismic Velocity Method

    Science.gov (United States)

    Bin Mohamad, Edy Tonnizam; Saad, Rosli; Noor, Muhazian Md; Isa, Mohamed Fauzi Bin Md.; Mazlan, Ain Naadia

    2010-12-01

    Seismic refraction method is one of the most popular methods in assessing surface excavation. The main objective of the seismic data acquisition is to delineate the subsurface into velocity profiles as different velocity can be correlated to identify different materials. The physical principal used for the determination of excavatability is that seismic waves travel faster through denser material as compared to less consolidated material. In general, a lower velocity indicates material that is soft and a higher velocity indicates more difficult to be excavated. However, a few researchers have noted that seismic velocity method alone does not correlate well with the excavatability of the material. In this study, a seismic velocity method was used in Nusajaya, Johor to assess the accuracy of this seismic velocity method with excavatability of the weathered sedimentary rock mass. A direct ripping run by monitoring the actual production of ripping has been employed at later stage and compared to the ripper manufacturer's recommendation. This paper presents the findings of the seismic velocity tests in weathered sedimentary area. The reliability of using this method with the actual rippability trials is also presented.

  7. Time-lapse imaging of neural development: zebrafish lead the way into the fourth dimension.

    Science.gov (United States)

    Rieger, Sandra; Wang, Fang; Sagasti, Alvaro

    2011-07-01

    Time-lapse imaging is often the only way to appreciate fully the many dynamic cell movements critical to neural development. Zebrafish possess many advantages that make them the best vertebrate model organism for live imaging of dynamic development events. This review will discuss technical considerations of time-lapse imaging experiments in zebrafish, describe selected examples of imaging studies in zebrafish that revealed new features or principles of neural development, and consider the promise and challenges of future time-lapse studies of neural development in zebrafish embryos and adults. Copyright © 2011 Wiley-Liss, Inc.

  8. Effect of oxygen concentration on human embryo development evaluated by time-lapse monitoring

    DEFF Research Database (Denmark)

    Ingerslev, Hans Jakob; Hindkjær, Johnny Juhl; Kirkegaard, Kirstine

    2012-01-01

    recently demonstrated to occur from first cleavage cycle in mice using time-lapse microscopy, with the largest impact on the pre-compaction stages. However, embryonic development in mice differs in many aspects from human embryonic development. The objective of this retrospective, descriptive study...... was to evaluate the influence of oxygen tension on human pre-implantation development using time-lapse monitoring. Materials and methods: Human embryos were cultured to the blastocyst stage in a time-lapse incubator (EmbryoScope™) in 20% O2 (group 1), 20% O2 for 24 hours followed by culture in 5% O2 (group 2......) or in 5% O2 (group 3). Eligible were patients with age 8 oocytes retrieved. Group 1 consisted of 120 IVF/ICSI embryos from 26 patients recruited to a study conducted to evaluate the safety of the time-lapse incubator by randomising 1:1 embryos from a patient to culture...

  9. Interferometric full-waveform inversion of time-lapse data

    KAUST Repository

    Sinha, Mrinal

    2017-01-01

    surveys. To overcome this challenge, we propose the use of interferometric full waveform inversion (IFWI) for inverting the velocity model from data recorded by baseline and monitor surveys. A known reflector is used as the reference reflector for IFWI

  10. A comparison of seismic velocity inversion methods for layered acoustics

    NARCIS (Netherlands)

    Van Leeuwen, T.; Mulder, W.A.

    2009-01-01

    In seismic imaging, one tries to infer the medium properties of the subsurface from seismic reflection data. These data are the result of an active source experiment, where an explosive source and an array of receivers are placed at the surface. Due to the absence of low frequencies in the data, the

  11. In-situ measurements of seismic velocities in the San Francisco Bay region...part II

    Science.gov (United States)

    Gibbs, James F.; Fumal, Thomas E.; Borcherdt, Roger D.

    1976-01-01

    Seismic wave velocities (compressional and shear) are important parameters for determining the seismic response characteristics of various geologic units when subjected to strong earthquake ground shaking. Seismic velocities of various units often show a strong correlation with the amounts of damage following large earthquakes and have been used as a basis for certain types of seismic zonation studies. Currently a program is in progress to measure seismic velocities in the San Francisco Bay region at an estimated 150 sites. At each site seismic travel times are measured in drill holes, normally at 2.5-m intervals to a depth of 30 m. Geologic logs are determined from drill hole cuttings, undisturbed samples, and penetrometer samples. The data provide a detailed comparison of geologic and seismic characteristics and provide parameters for estimating strong earthquake ground motions quantitatively at each of the site. A major emphasis of this program is to obtain a detailed comparison of geologic and seismic data on a regional scale for use in seismic zonation. The broad data base available in the San Francisco Bay region suggests using the area as a pilot area for the development of general techniques applicable to other areas.

  12. Seismicity Characterization and Velocity Structure of Northeast Russia

    National Research Council Canada - National Science Library

    Mackey, Kevin G; Fujita, Kazuya

    2005-01-01

    A seismicity catalog and associated list of phases for many events has been compiled for northeast Russia using published and unpublished data from the regional networks operating in eastern Russia...

  13. Imaging of 3-D seismic velocity structure of Southern Sumatra region using double difference tomographic method

    Energy Technology Data Exchange (ETDEWEB)

    Lestari, Titik, E-mail: t2klestari@gmail.com [Meteorological Climatological and Geophysical Agency (MCGA), Jalan Angkasa I No.2 Kemayoran, Jakarta Pusat, 10720 (Indonesia); Faculty of Earth Science and Technology, Bandung Institute of Technology, Jalan Ganesa No.10, Bandung 40132 (Indonesia); Nugraha, Andri Dian, E-mail: nugraha@gf.itb.ac.id [Global Geophysical Research Group, Faculty of Mining and Petroleum Engineering, Bandung Institute of Technology, Jalan Ganesa 10 Bandung 40132 (Indonesia)

    2015-04-24

    Southern Sumatra region has a high level of seismicity due to the influence of the subduction system, Sumatra fault, Mentawai fault and stretching zone activities. The seismic activities of Southern Sumatra region are recorded by Meteorological Climatological and Geophysical Agency (MCGA’s) Seismograph network. In this study, we used earthquake data catalog compiled by MCGA for 3013 events from 10 seismic stations around Southern Sumatra region for time periods of April 2009 – April 2014 in order to invert for the 3-D seismic velocities structure (Vp, Vs, and Vp/Vs ratio). We applied double-difference seismic tomography method (tomoDD) to determine Vp, Vs and Vp/Vs ratio with hypocenter adjustment. For the inversion procedure, we started from the initial 1-D seismic velocity model of AK135 and constant Vp/Vs of 1.73. The synthetic travel time from source to receiver was calculated using ray pseudo-bending technique, while the main tomographic inversion was applied using LSQR method. The resolution model was evaluated using checkerboard test and Derivative Weigh Sum (DWS). Our preliminary results show low Vp and Vs anomalies region along Bukit Barisan which is may be associated with weak zone of Sumatran fault and migration of partial melted material. Low velocity anomalies at 30-50 km depth in the fore arc region may indicated the hydrous material circulation because the slab dehydration. We detected low seismic seismicity in the fore arc region that may be indicated as seismic gap. It is coincides contact zone of high and low velocity anomalies. And two large earthquakes (Jambi and Mentawai) also occurred at the contact of contrast velocity.

  14. The relationship of seismic velocity structure and surface fracture characteristics of basalt outcrops to rippability estimates

    International Nuclear Information System (INIS)

    Kay, S.E.; Dougherty, M.E.; Pelton, J.R.

    1994-01-01

    Seismic velocity has been shown in previous engineering studies to be related to the fracture characteristics and rippability of rock outcrops. However, common methods of measuring seismic velocity in outcrops do not take into account the many possible travel paths for wave propagation and the fact that velocity zones may exist within an outcrop. Presented here are the results of using raytracing inversion of first-arrival travel-time data to map P-velocity structure in basalt outcrops, and also the investigation of the relationship of the mapped velocities to observed surface fractures and hand-sample P-velocities. It is shown that basalt outcrops commonly consist of an irregular near-surface low-velocity zone underlain by higher velocity material; that velocity gradients can exist in outcrops; that hand-sample velocity measurements are typically higher than outcrop-scale measurements; and that the characteristics of surface fractures are empirically related to near-surface P-velocity. All of these findings are relevant to the estimated rippability of rock in geotechnical engineering. The data for this study are derived from eleven sites on basalt outcrops of the Troodos Ophiolite in Cyprus. The basalt types include pillow basalts, massive flows, and a pillow breccia. A commonly available raytracing inversion program (RAYINVR) was used to produce a velocity profile of each outcrop. Different velocity zones were detailed by inverting observed travel times to produce a model of outcrop velocity structure which produces rippability profiles for each outcrop. 16 refs., 9 figs

  15. In-situ measurements of seismic velocities in the San Francisco Bay Region; part III

    Science.gov (United States)

    Gibbs, James F.; Fumal, Thomas E.; Borcherdt, Roger D.; Roth, Edward F.

    1977-01-01

    Seismic wave velocities (compressional and shear) are important parameters for estimating the seismic response characteristics of various geologic units when subjected to strong earthquake ground shaking. Seismic velocities of various units often show a strong correlation with the amounts of damage following large earthquakes and have been used as a basis for certain types of seismic zonation studies. In the current program seismic velocities have been measured at 59 locations 1n the San Francisco Bay Region. This report is the third in a series of Open-File Reports and describes the in-situ velocity measurements at locations 35-59. At each location seismic travel times are measured in drill holes, normally at 2.5-m intervals to a depth of 30 m. Geologic logs are determined from drill cuttings, undisturbed (cored) samples, and penetrometer samples. The data provide a detailed comparison of geologic and seismic characteristics and provide parameters for estimating strong earthquake ground motions quantitatively at each of the sites. A major emphasis of this program is to obtain a detailed comparison of geologic and seismic data on a regional scale for use in seismic zonation. There is a variety of geologic and seismic data available in the San Francisco Bay Region for use 1n developing the general zoning techniques which can then be applied to other areas. Shear wave velocities 1n near-surface geologic materials are of especial interest for engineering seismology and seismic zonation studies, yet in general, they are difficult to measure because of contamination by compressional waves. A comparison of various in-situ techniques by Warrick (1974) establishes the reliability of the method utilizing a "horizontal traction" source for sites underlain by bay mud and alluvium. Gibbs, and others (1975a) present data from 12 holes and establishes the reliability of the method for sites underlain by a variety of different rock units and suggest extending the measurements to

  16. Inter- and intra-observer variability of time-lapse annotations

    DEFF Research Database (Denmark)

    Sundvall, Linda; Ingerslev, Hans Jakob; Breth Knudsen, Ulla

    2013-01-01

    . This provides the basis for further investigation of embryo assessment and selection by time-lapse imaging in prospective trials. Study funding/competing interest(s): Research at the Fertility Clinic was funded by an unrestricted grant from Ferring and MSD. The authors have no competing interests to declare.......Study question: How consistent is the time-lapse annotation of dynamic and static morphologic parameters of embryo development, within and between observers? Summary answer: The assessment of dynamic parameters is characterized by almost perfect agreement within and between observers. What is known...... already: The commonly employed method used to assess embryos in IVF treatments is based on static evaluation of morphology in a microscope, but this is limited by substantial intra- and inter-observer variation. Time-lapse imaging has been proposed as a method to refine embryo selection by adding new...

  17. How does blastomere removal affect embryonic development? : A time-lapse analysis

    DEFF Research Database (Denmark)

    Kirkegaard, Kirstine; Hindkjær, Johnny Juhl; Ingerslev, Hans Jakob

    of the 6-10 cell embryo. It has been argued that blastomere removal does not affect embryonic development, but few studies have focussed on safety of the procedure. Recently, time-lapse studies on mice have suggested that blastomere removal affects embryonic development. The present study was conducted...... to evaluate the effect of blastomere biopsy on early human embryonic development using time-lapse analysis. Materials and methods: Couples undergoing IVF treatment or PGD were requested permission to include embryos in the project. The diagnosis healthy/diseased was made by analysis of a single blastomere....... For PGD 56 human embryos were biopsied 68 hours after fertilisation, the majority at the eight cell stage. As controls 43 non-biopsied embryos at the 6-8 cell stage were selected. All embryos were cultured until 5 days after fertilisation in a time-lapse incubator (EmbryoScope™). Key events such as time...

  18. Extremal inversion of lunar travel time data. [seismic velocity structure

    Science.gov (United States)

    Burkhard, N.; Jackson, D. D.

    1975-01-01

    The tau method, developed by Bessonova et al. (1974), of inversion of travel times is applied to lunar P-wave travel time data to find limits on the velocity structure of the moon. Tau is the singular solution to the Clairaut equation. Models with low-velocity zones, with low-velocity zones at differing depths, and without low-velocity zones, were found to be consistent with data and within the determined limits. Models with and without a discontinuity at about 25-km depth have been found which agree with all travel time data to within two standard deviations. In other words, the existence of the discontinuity and its size and location have not been uniquely resolved. Models with low-velocity channels are also possible.

  19. Automatic segmentation of time-lapse microscopy images depicting a live Dharma embryo.

    Science.gov (United States)

    Zacharia, Eleni; Bondesson, Maria; Riu, Anne; Ducharme, Nicole A; Gustafsson, Jan-Åke; Kakadiaris, Ioannis A

    2011-01-01

    Biological inferences about the toxicity of chemicals reached during experiments on the zebrafish Dharma embryo can be greatly affected by the analysis of the time-lapse microscopy images depicting the embryo. Among the stages of image analysis, automatic and accurate segmentation of the Dharma embryo is the most crucial and challenging. In this paper, an accurate and automatic segmentation approach for the segmentation of the Dharma embryo data obtained by fluorescent time-lapse microscopy is proposed. Experiments performed in four stacks of 3D images over time have shown promising results.

  20. Advances in interpretation of subsurface processes with time-lapse electrical imaging

    Science.gov (United States)

    Singha, Kaminit; Day-Lewis, Frederick D.; Johnson, Tim B.; Slater, Lee D.

    2015-01-01

    Electrical geophysical methods, including electrical resistivity, time-domain induced polarization, and complex resistivity, have become commonly used to image the near subsurface. Here, we outline their utility for time-lapse imaging of hydrological, geochemical, and biogeochemical processes, focusing on new instrumentation, processing, and analysis techniques specific to monitoring. We review data collection procedures, parameters measured, and petrophysical relationships and then outline the state of the science with respect to inversion methodologies, including coupled inversion. We conclude by highlighting recent research focused on innovative applications of time-lapse imaging in hydrology, biology, ecology, and geochemistry, among other areas of interest.

  1. Deriving micro- to macro-scale seismic velocities from ice-core c axis orientations

    Science.gov (United States)

    Kerch, Johanna; Diez, Anja; Weikusat, Ilka; Eisen, Olaf

    2018-05-01

    One of the great challenges in glaciology is the ability to estimate the bulk ice anisotropy in ice sheets and glaciers, which is needed to improve our understanding of ice-sheet dynamics. We investigate the effect of crystal anisotropy on seismic velocities in glacier ice and revisit the framework which is based on fabric eigenvalues to derive approximate seismic velocities by exploiting the assumed symmetry. In contrast to previous studies, we calculate the seismic velocities using the exact c axis angles describing the orientations of the crystal ensemble in an ice-core sample. We apply this approach to fabric data sets from an alpine and a polar ice core. Our results provide a quantitative evaluation of the earlier approximative eigenvalue framework. For near-vertical incidence our results differ by up to 135 m s-1 for P-wave and 200 m s-1 for S-wave velocity compared to the earlier framework (estimated 1 % difference in average P-wave velocity at the bedrock for the short alpine ice core). We quantify the influence of shear-wave splitting at the bedrock as 45 m s-1 for the alpine ice core and 59 m s-1 for the polar ice core. At non-vertical incidence we obtain differences of up to 185 m s-1 for P-wave and 280 m s-1 for S-wave velocities. Additionally, our findings highlight the variation in seismic velocity at non-vertical incidence as a function of the horizontal azimuth of the seismic plane, which can be significant for non-symmetric orientation distributions and results in a strong azimuth-dependent shear-wave splitting of max. 281 m s-1 at some depths. For a given incidence angle and depth we estimated changes in phase velocity of almost 200 m s-1 for P wave and more than 200 m s-1 for S wave and shear-wave splitting under a rotating seismic plane. We assess for the first time the change in seismic anisotropy that can be expected on a short spatial (vertical) scale in a glacier due to strong variability in crystal-orientation fabric (±50 m s-1 per 10 cm

  2. Relating seismicity to the velocity structure of the San Andreas Fault near Parkfield, CA

    Science.gov (United States)

    Lippoldt, Rachel; Porritt, Robert W.; Sammis, Charles G.

    2017-06-01

    The central section of the San Andreas Fault (SAF) displays a range of seismic phenomena including normal earthquakes, low-frequency earthquakes (LFE), repeating microearthquakes (REQ) and aseismic creep. Although many lines of evidence suggest that LFEs are tied to the presence of fluids, their geological setting is still poorly understood. Here, we map the seismic velocity structures associated with LFEs beneath the central SAF using surface wave tomography from ambient seismic noise to provide constraints on the physical conditions that control LFE occurrence. Fault perpendicular sections show that the SAF, as revealed by lateral contrasts in relative velocities, is contiguous to depths of 50 km and appears to be relatively localized at depths between about 15 and 30 km. This is consistent with the hypothesis that LFEs are shear-slip events on a deep extension of the SAF. We find that along strike variations in seismic behaviour correspond to changes in the seismic structure, which support proposed connections between fluids and seismicity. LFEs and REQs occur within low-velocity structures, suggesting that the presence of fluids, weaker minerals, or hydrous phase minerals may play an important role in the generation of slow-slip phenomena.

  3. New Observations of Seismic Group Velocities in the Western Solomon Islands from Cross-Correlation of Ambient Seismic Noise

    Science.gov (United States)

    Ku, C. S.; You, S. H.; Kuo, Y. T.; Huang, B. S.; Wu, Y. M.; Chen, Y. G.; Taylor, F. W.

    2015-12-01

    A MW 8.1 earthquake occurred on 1 April 2007 in the western Solomon Islands. Following this event, a damaging tsunami was induced and hit the Island Gizo where the capital city of Western Province of Solomon Islands located. Several buildings of this city were destroyed and several peoples lost their lives during this earthquake. However, during this earthquake, no near source seismic instrument has been installed in this region. The seismic evaluations for the aftershock sequence, the possible earthquake early warning and tsunami warning were unavailable. For the purpose of knowing more detailed information about seismic activity in this region, we have installed 9 seismic stations (with Trillium 120PA broadband seismometer and Q330S 24bit digitizer) around the rupture zone of the 2007 earthquake since September of 2009. Within a decade, it has been demonstrated both theoretically and experimentally that the Green's function or impulse response between two seismic stations can be retrieved from the cross-correlation of ambient noise. In this study, 6 stations' observations which are more complete during 2011/10 ~ 2012/12 period, were selected for the purpose of the cross-correlation analysis of ambient seismic noise. The group velocities at period 2-20 seconds of 15 station-pairs were extracted by using multiple filter technique (MFT) method. The analyzed results of this study presented significant results of group velocities with higher frequency contents than other studies (20-60 seconds in usually cases) and opened new opportunities to study the shallow crustal structure of the western Solomon Islands.

  4. Time-Lapse and Slow-Motion Tracking of Temperature Changes: Response Time of a Thermometer

    Science.gov (United States)

    Moggio, L.; Onorato, P.; Gratton, L. M.; Oss, S.

    2017-01-01

    We propose the use of a smartphone based time-lapse and slow-motion video techniques together with tracking analysis as valuable tools for investigating thermal processes such as the response time of a thermometer. The two simple experimental activities presented here, suitable also for high school and undergraduate students, allow one to measure…

  5. Probabilistic 3-D time-lapse inversion of magnetotelluric data: application to an enhanced geothermal system

    Science.gov (United States)

    Rosas-Carbajal, M.; Linde, N.; Peacock, J.; Zyserman, F. I.; Kalscheuer, T.; Thiel, S.

    2015-12-01

    Surface-based monitoring of mass transfer caused by injections and extractions in deep boreholes is crucial to maximize oil, gas and geothermal production. Inductive electromagnetic methods, such as magnetotellurics, are appealing for these applications due to their large penetration depths and sensitivity to changes in fluid conductivity and fracture connectivity. In this work, we propose a 3-D Markov chain Monte Carlo inversion of time-lapse magnetotelluric data to image mass transfer following a saline fluid injection. The inversion estimates the posterior probability density function of the resulting plume, and thereby quantifies model uncertainty. To decrease computation times, we base the parametrization on a reduced Legendre moment decomposition of the plume. A synthetic test shows that our methodology is effective when the electrical resistivity structure prior to the injection is well known. The centre of mass and spread of the plume are well retrieved. We then apply our inversion strategy to an injection experiment in an enhanced geothermal system at Paralana, South Australia, and compare it to a 3-D deterministic time-lapse inversion. The latter retrieves resistivity changes that are more shallow than the actual injection interval, whereas the probabilistic inversion retrieves plumes that are located at the correct depths and oriented in a preferential north-south direction. To explain the time-lapse data, the inversion requires unrealistically large resistivity changes with respect to the base model. We suggest that this is partly explained by unaccounted subsurface heterogeneities in the base model from which time-lapse changes are inferred.

  6. CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data.

    Science.gov (United States)

    Bray, Mark-Anthony; Carpenter, Anne E

    2015-11-04

    Time-lapse analysis of cellular images is an important and growing need in biology. Algorithms for cell tracking are widely available; what researchers have been missing is a single open-source software package to visualize standard tracking output (from software like CellProfiler) in a way that allows convenient assessment of track quality, especially for researchers tuning tracking parameters for high-content time-lapse experiments. This makes quality assessment and algorithm adjustment a substantial challenge, particularly when dealing with hundreds of time-lapse movies collected in a high-throughput manner. We present CellProfiler Tracer, a free and open-source tool that complements the object tracking functionality of the CellProfiler biological image analysis package. Tracer allows multi-parametric morphological data to be visualized on object tracks, providing visualizations that have already been validated within the scientific community for time-lapse experiments, and combining them with simple graph-based measures for highlighting possible tracking artifacts. CellProfiler Tracer is a useful, free tool for inspection and quality control of object tracking data, available from http://www.cellprofiler.org/tracer/.

  7. Exploiting the airwave for time-lapse reservoir monitoring with CSEM on land

    NARCIS (Netherlands)

    Wirianto, M.; Mulder, W.A.; Slob, E.C.

    2011-01-01

    In the application of controlled source electromagnetics for reservoir monitoring on land, repeatability errors in the source will mask the time-lapse signal due to hydrocarbon production when recording surface data close to the source. We demonstrate that at larger distances, the airwave will still

  8. Inter and intra-observer variability of time-lapse annotations

    DEFF Research Database (Denmark)

    Sundvall Germeys, Linda Karin M; Ingerslev, Hans Jakob; Knudsen, Ulla Breth

    . This provides the basis for further investigation of embryo assessment and selection by time-lapse imaging in prospective trials. Study funding/competing interest(s): Research at the Fertility Clinic was funded by an unrestricted grant from Ferring and MSD. The authors have no competing interests to declare....

  9. Time-lapse misorientation maps for the analysis of electron backscatter diffraction data from evolving microstructures

    NARCIS (Netherlands)

    Wheeler, J.; Cross, A.; Drury, M.; Hough, R.M.; Mariani, E.; Piazolo, S.; Prior, D.J.

    2011-01-01

    A “time-lapse misorientation map” is defined here as a map which shows the orientation change at each point in an evolving crystalline microstructure between two different times. Electron backscatter diffraction data from in situ heating experiments can be used to produce such maps, which then

  10. Seismic velocity structure in the lower crust beneath the seismic belt in the San-in district, Southwest Japan

    Science.gov (United States)

    Tsuda, H.; Iio, Y.; Shibutani, T.

    2017-12-01

    In the San-in district in Southwest Japan, a linear distribution of the epicenters of microearthquakes is seen along the coast of the Japan Sea (Fig. 1). The linear distribution is known as the seismic belt in the San-in district. Large earthquakes also occurred in the seismic belt. What localizes the earthquake distribution in the San-in district which is located far from the plate boundary? We thought that the model proposed by Iio et al. (2002, 2004) could answer this question. The model is as follows. Viscosity is low in a part of the lower crust, which is called `weak zone'. Stress and strain are concentrated in the upper crust right above the weak zone, due to concentrated deformation in the weak zone, and thus earthquakes occur there. To verify whether the weak zone exists in the lower crust beneath the seismic belt, we estimated the seismic velocity structure there by travel-time tomography. We used the tomography program, FMTOMO (Rawlinson et al., 2006). For the model space, we set the latitude range of 33°-36°N, the longitude range of 131°-136°E (Fig. 1), and the depth range of 0-81 km. The grid intervals are 0.1°×0.1°×7 km. We used arrival times picked by Japan Meteorological Agency (JMA) for earthquakes that occurred in the study area. In addition, we used arrival times manually picked at stations in and around the San-in district for earthquakes that occurred within the Philippine Sea Slab, because they are not included in the JMA data. Since the seismic waves from those earthquakes to the stations in the San-in district pass through the lower crust beneath the San-in district, we expect that these data can improve the resolution there. We revealed that low velocity anomalies exist in the lower crust beneath the seismic belt (Fig. 1). It is inferred that the region of low velocity anomalies is characterized by low viscosity, since velocities of rocks decrease with temperature and/or water content. Therefore, the results of this study support

  11. Variations and healing of the seismic velocity (Beno Gutenberg Medal Lecture)

    Science.gov (United States)

    Snieder, Roel

    2016-04-01

    Scattering of waves leads to a complexity of waveforms that is often seen by seismologists as a nuisance. And indeed, the complicated wave paths of multiple scattered waves makes it difficult to use these waves for imaging. Yet, the long wave paths of multiple scattered waves makes these waves an ideal tool for measuring minute velocity changes. This has led to the development of coda wave interferometry as a tool for measuring small velocity changes in the laboratory and with field data. Combined with the use of noise cross correlations - seismic interferometry - this method is even more useful because it follows for a quasi-continuous measurement of velocity changes. I will show examples of detecting velocity changes in the laboratory, the earth's near surface, and in engineered structures. Perhaps surprisingly, the seismic velocity is not constant at all, and varies with the seasons, temperature, precipitation, as the weather does. In addition, the seismic velocity usually drops as a result of deformation. Most of these changes likely occur in the near surface or the region of deformation, and a drawback of using strongly scattered waves is that it is difficult to localize the spatial area of the velocity change. I will present laboratory measurements that show that a certain spatial localization of the velocity change can be achieved. One of the intriguing observations is that after deformation the seismic velocity recovers logarithmically with time. The reason for this particular time-dependence is the presence of healing mechanisms that operate at different time scales. Since this is feature of many physical systems, the logarithmic healing is a widespread behavior and is akin in its generality to the Gutenberg-Richter law.

  12. Comparison of shear-wave velocity measurements by crosshole, downhole and seismic cone penetration test methods

    Energy Technology Data Exchange (ETDEWEB)

    Suthaker, N.; Tweedie, R. [Thurber Engineering Ltd., Edmonton, AB (Canada)

    2009-07-01

    Shear wave velocity measurements are an integral part of geotechnical studies for major structures and are an important tool in their design for site specific conditions such as site-specific earthquake response. This paper reported on a study in which shear wave velocities were measured at a proposed petrochemical plant site near Edmonton, Alberta. The proposed site is underlain by lacustrine clay, glacial till and upper Cretaceous clay shale and sandstone bedrock. The most commonly used methods for determining shear wave velocity include crosshole seismic tests, downhole seismic tests, and seismic cone penetration tests (SCPT). This paper presented the results of all 3 methods used in this study and provided a comparison of the various test methods and their limitations. The crosshole test results demonstrated a common trend of increasing shear wave velocity with depth to about 15 m, below which the velocities remained relatively constant. An anomaly was noted at one site, where the shear wave velocity was reduced at a zone corresponding to clay till containing stiff high plastic clay layers. The field study demonstrated that reasonable agreement in shear wave velocity measurements can be made using crosshole, downhole and seismic tests in the same soil conditions. The National Building Code states that the shear wave velocity is the fundamental method for determining site classification, thus emphasizing the importance of obtaining shear wave velocity measurements for site classification. It was concluded that an SCPT program can be incorporated into the field program without much increase in cost and can be supplemented by downhole or crosshole techniques. 5 refs., 2 tabs., 10 figs.

  13. Monitoring changes in seismic velocity related to an ongoing rapid inflation event at Okmok volcano, Alaska

    Science.gov (United States)

    Bennington, Ninfa; Haney, Matt; De Angelis, Silvio; Thurber, Clifford; Freymueller, Jeff

    2015-01-01

    Okmok is one of the most active volcanoes in the Aleutian Arc. In an effort to improve our ability to detect precursory activity leading to eruption at Okmok, we monitor a recent, and possibly ongoing, GPS-inferred rapid inflation event at the volcano using ambient noise interferometry (ANI). Applying this method, we identify changes in seismic velocity outside of Okmok’s caldera, which are related to the hydrologic cycle. Within the caldera, we observe decreases in seismic velocity that are associated with the GPS-inferred rapid inflation event. We also determine temporal changes in waveform decorrelation and show a continual increase in decorrelation rate over the time associated with the rapid inflation event. Themagnitude of relative velocity decreases and decorrelation rate increases are comparable to previous studies at Piton de la Fournaise that associate such changes with increased production of volatiles and/ormagmatic intrusion within the magma reservoir and associated opening of fractures and/or fissures. Notably, the largest decrease in relative velocity occurs along the intrastation path passing nearest to the center of the caldera. This observation, along with equal amplitude relative velocity decreases revealed via analysis of intracaldera autocorrelations, suggests that the inflation sourcemay be located approximately within the center of the caldera and represent recharge of shallow magma storage in this location. Importantly, there is a relative absence of seismicity associated with this and previous rapid inflation events at Okmok. Thus, these ANI results are the first seismic evidence of such rapid inflation at the volcano.

  14. Near-Surface Seismic Velocity Data: A Computer Program For ...

    African Journals Online (AJOL)

    A computer program (NESURVELANA) has been developed in Visual Basic Computer programming language to carry out a near surface velocity analysis. The method of analysis used includes: Algorithms design and Visual Basic codes generation for plotting arrival time (ms) against geophone depth (m) employing the ...

  15. Seismic velocity variation along the Izu-Bonin arc estaimated from traveltime tomography using OBS data

    Science.gov (United States)

    Obana, K.; Tamura, Y.; Takahashi, T.; Kodaira, S.

    2014-12-01

    The Izu-Bonin (Ogasawara) arc is an intra-oceanic island arc along the convergent plate boundary between the subducting Pacific and overriding Philippine Sea plates. Recent active seismic studies in the Izu-Bonin arc reveal significant along-arc variations in crustal structure [Kodaira et al., 2007]. The thickness of the arc crust shows a remarkable change between thicker Izu (~30 km) and thinner Bonin (~10 km) arcs. In addition to this, several geological and geophysical contrasts, such as seafloor topography and chemical composition of volcanic rocks, between Izu and Bonin arc have been reported [e.g., Yuasa 1992]. We have conducted earthquake observations using ocean bottom seismographs (OBSs) to reveal seismic velocity structure of the crust and mantle wedge in the Izu-Bonin arc and to investigate origin of the along-arc structure variations. We deployed 40 short-period OBSs in Izu and Bonin area in 2006 and 2009, respectively. The OBS data were processed with seismic data recorded at routine seismic stations on Hachijo-jima, Aoga-shima, and Chichi-jima operated by National Research Institute for Earth Science and Disaster Prevention (NIED). More than 5000 earthquakes were observed during about three-months observation period in each experiment. We conducted three-dimensional seismic tomography using manually picked P- and S-wave arrival time data. The obtained image shows a different seismic velocity structures in the mantle beneath the volcanic front between Izu and Bonin arcs. Low P-wave velocity anomalies in the mantle beneath the volcanic front in the Izu arc are limited at depths deeper than those in the Bonin arc. On the other hand, P-wave velocity in the low velocity anomalies beneath volcanic front in the Bonin arc is slower than that in the Izu arc. These large-scale along-arc structure variations in the mantle could relate to the geological and geophysical contrasts between Izu and Bonin arcs.

  16. A generalized formulation for noise-based seismic velocity change measurements

    Science.gov (United States)

    Gómez-García, C.; Brenguier, F.; Boué, P.; Shapiro, N.; Droznin, D.; Droznina, S.; Senyukov, S.; Gordeev, E.

    2017-12-01

    The observation of continuous seismic velocity changes is a powerful tool for detecting seasonal variations in crustal structure, volcanic unrest, co- and post-seismic evolution of stress in fault areas or the effects of fluid injection. The standard approach for measuring such velocity changes relies on comparison of travel times in the coda of a set of seismic signals, usually noise-based cross-correlations retrieved at different dates, and a reference trace, usually a averaged function over dates. A good stability in both space and time of the noise sources is then the main assumption for reliable measurements. Unfortunately, these conditions are often not fulfilled, as it happens when ambient-noise sources are non-stationary, such as the emissions of low-frequency volcanic tremors.We propose a generalized formulation for retrieving continuous time series of noise-based seismic velocity changes without any arbitrary reference cross-correlation function. We set up a general framework for future applications of this technique performing synthetic tests. In particular, we study the reliability of the retrieved velocity changes in case of seasonal-type trends, transient effects (similar to those produced as a result of an earthquake or a volcanic eruption) and sudden velocity drops and recoveries as the effects of transient local source emissions. Finally, we apply this approach to a real dataset of noise cross-correlations. We choose the Klyuchevskoy volcanic group (Kamchatka) as a case study where the recorded wavefield is hampered by loss of data and dominated by strongly localized volcanic tremor sources. Despite the mentioned wavefield contaminations, we retrieve clear seismic velocity drops associated with the eruptions of the Klyuchevskoy an the Tolbachik volcanoes in 2010 and 2012, respectively.

  17. Allowable Pressure In Soils and Rocks by Seismic Wave Velocities

    International Nuclear Information System (INIS)

    Tezcan, S.; Keceli, A.; Oezdemir, Z.

    2007-01-01

    Firstly, the historical background is presented for the determination of ultimate bearing capacity of shallow foundations. The principles of plastic equilibrium used in the classical formulation of the ultimate bearing capacity are reviewed, followed by a discussion about the sources of approximations inherent in the classical theory. Secondly, based on a variety of case histories of site investigations, including extensive bore hole data, laboratory testing and geophysical prospecting, an empirical formulation is proposed for the determination of allowable bearing capacity of shallow foundations. The proposed expression corroborates consistently with the results of the classical theory and is proven to be reliable and safe, also from the view point of maximum allowable settlements. It consists of only two soil parameters, namely, the Institut measured shear wave velocity, and the unit weight. The unit weight may be also determined with sufficient accuracy, by means of another empirical expression, using the P-wave velocity. It is indicated that once the shear and P-wave velocities are measured Institut by an appropriate geophysical survey, the allowable bearing capacity is determined reliably through a single step operation. Such an approach, is considerably cost and time-saving, in practice

  18. Seismic velocity distribution in the vicinity of a mine tunnel at Thabazimbi, South Africa

    CSIR Research Space (South Africa)

    Wright, C

    2000-07-01

    Full Text Available Analysis of the refracted arrivals on a seismic reflection profile recorded along the wall of a tunnel at an iron mine near Thabazimbi, South Africa, shows variations in P-wave velocity in dolomite away from the de-stressed zone that vary between 4...

  19. Relationships among seismic velocity, metamorphism, and seismic and aseismic fault slip in the Salton Sea Geothermal Field region

    Science.gov (United States)

    McGuire, Jeffrey J.; Lohman, Rowena B.; Catchings, Rufus D.; Rymer, Michael J.; Goldman, Mark R.

    2015-01-01

    The Salton Sea Geothermal Field is one of the most geothermally and seismically active areas in California and presents an opportunity to study the effect of high-temperature metamorphism on the properties of seismogenic faults. The area includes numerous active tectonic faults that have recently been imaged with active source seismic reflection and refraction. We utilize the active source surveys, along with the abundant microseismicity data from a dense borehole seismic network, to image the 3-D variations in seismic velocity in the upper 5 km of the crust. There are strong velocity variations, up to ~30%, that correlate spatially with the distribution of shallow heat flow patterns. The combination of hydrothermal circulation and high-temperature contact metamorphism has significantly altered the shallow sandstone sedimentary layers within the geothermal field to denser, more feldspathic, rock with higher P wave velocity, as is seen in the numerous exploration wells within the field. This alteration appears to have a first-order effect on the frictional stability of shallow faults. In 2005, a large earthquake swarm and deformation event occurred. Analysis of interferometric synthetic aperture radar data and earthquake relocations indicates that the shallow aseismic fault creep that occurred in 2005 was localized on the Kalin fault system that lies just outside the region of high-temperature metamorphism. In contrast, the earthquake swarm, which includes all of the M > 4 earthquakes to have occurred within the Salton Sea Geothermal Field in the last 15 years, ruptured the Main Central Fault (MCF) system that is localized in the heart of the geothermal anomaly. The background microseismicity induced by the geothermal operations is also concentrated in the high-temperature regions in the vicinity of operational wells. However, while this microseismicity occurs over a few kilometer scale region, much of it is clustered in earthquake swarms that last from

  20. A randomized clinical trial comparing embryo culture in a conventional incubator with a time-lapse incubator

    DEFF Research Database (Denmark)

    Kirkegaard, Kirstine; Hindkjaer, Johnny Juhl; Grøndahl, Marie Louise

    2012-01-01

    Time-lapse monitoring allows for a flexible embryo evaluation and potentially provides new dynamic markers of embryo competence. Before introducing time-lapse monitoring in a clinical setting, the safety of the instrument must be properly documented. Accordingly, the aim of this study...

  1. Heat-flow and lateral seismic-velocity heterogeneities near Deep Sea Drilling Project-Ocean Drilling Program Site 504

    Science.gov (United States)

    Lowell, Robert P.; Stephen, Ralph A.

    1991-11-01

    Both conductive heat-flow and seismic-velocity data contain information relating to the permeability of the oceanic crust. Deep Sea Drilling Project-Ocean Drilling Program Site 504 is the only place where both detailed heat-flow and seismic-velocity field studies have been conducted at the same scale. In this paper we examine the correlation between heat flow and lateral heterogeneities in seismic velocity near Site 504. Observed heterogeneities in seismic velocity, which are thought to be related to variations in crack density in the upper 500 m of the basaltic crust, show little correlation with the heat-flow pattern. This lack of correlation highlights some of the current difficulties in using seismic-velocity data to infer details of spatial variations in permeability that are significant in controlling hydrothermal circulation.

  2. Three-dimensional seismic velocity structure of Mauna Loa and Kilauea volcanoes in Hawaii from local seismic tomography

    Science.gov (United States)

    Lin, Guoqing; Shearer, Peter M.; Matoza, Robin S.; Okubo, Paul G.; Amelung, Falk

    2016-01-01

    We present a new three-dimensional seismic velocity model of the crustal and upper mantle structure for Mauna Loa and Kilauea volcanoes in Hawaii. Our model is derived from the first-arrival times of the compressional and shear waves from about 53,000 events on and near the Island of Hawaii between 1992 and 2009 recorded by the Hawaiian Volcano Observatory stations. The Vp model generally agrees with previous studies, showing high-velocity anomalies near the calderas and rift zones and low-velocity anomalies in the fault systems. The most significant difference from previous models is in Vp/Vs structure. The high-Vp and high-Vp/Vs anomalies below Mauna Loa caldera are interpreted as mafic magmatic cumulates. The observed low-Vp and high-Vp/Vs bodies in the Kaoiki seismic zone between 5 and 15 km depth are attributed to the underlying volcaniclastic sediments. The high-Vp and moderate- to low-Vp/Vs anomalies beneath Kilauea caldera can be explained by a combination of different mafic compositions, likely to be olivine-rich gabbro and dunite. The systematically low-Vp and low-Vp/Vs bodies in the southeast flank of Kilauea may be caused by the presence of volatiles. Another difference between this study and previous ones is the improved Vp model resolution in deeper layers, owing to the inclusion of events with large epicentral distances. The new velocity model is used to relocate the seismicity of Mauna Loa and Kilauea for improved absolute locations and ultimately to develop a high-precision earthquake catalog using waveform cross-correlation data.

  3. From time-lapse seismic inversion to history matching of water flooded oil reservoirs

    NARCIS (Netherlands)

    Trani, M.

    2012-01-01

    The world energy demand still increases every year. As a consequence, the demand for fossil fuels, by far the first energy source, is increasing, while easily accessible fossil fuel resources are decreasing. This has stimulated research and development to the optimization of hydrocarbon recovery

  4. Seismic velocity and attenuation structures at the top 400 km of the inner core

    Science.gov (United States)

    Yu, W.; Wen, L.; Niu, F.

    2002-12-01

    Recent seismic studies reveal an ``east-west" hemispherical difference in seismic velocity and attenuation in the top of the inner core [Niu and Wen, 2001, Wen and Niu, 2002]. The PKiKP-PKIKP observations they used only allowed them to constrain the seismic structure in the top 80 km of the inner core. The question now arises as such to what depth this hemispherical difference persists. To answer this question, we combine the PKiKP-PKIKP dataset and the PKPbc-PKIKP observations at the distance range of 147o-160o to study seismic velocity and attenuation structures in the top 400 km of the inner core along the ``equatorial paths" (the paths whose ray angles > 35o from the polar direction). We select PKPbc-PKIKP waveforms from recordings in the Global Seismic Network (GSN) and several dense regional seismic arrays. We choose recordings for events from 1990 to 2000 with simple source time functions, so only those of intermediate and deep earthquakes are used. The observed PKPbc-PKIKP differential travel times and PKIKP/PKPbc amplitude ratios exhibit an ``east-west" hemispherical difference. The PKPbc-PKIKP travel time residuals are about 0.7 second larger for those sampling the ``eastern" hemisphere than those sampling the ``western" hemisphere. The PKIKP/PKPbc amplitude ratios are generally smaller for those sampling the ``eastern" hemisphere. We construct two seismic velocity and attenuation models, with one for each ``hemisphere", by iteratively modeling the observed PKiKP-PKIKP waveforms, the PKPbc-PKIKP differential travel times and the PKIKP/PKPbc amplitude ratios. For the ``eastern" hemisphere, the observations indicate that the E1 velocity gradient and Q structure, inferred from the PKiKP-PKIKP observations sampling the top 80 km of the inner core, extend at least to 230 km inside the inner core. A change of velocity gradient and Q value is required in the deeper portion of the inner core. For the ``western" hemisphere, on the other hand, W2 velocity gradient

  5. High resolution Rayleigh wave group velocity tomography in North-China from ambient seismic noise

    International Nuclear Information System (INIS)

    Fang Lihua; Wu Jianping; Ding Zhifeng; Panza, G.F.

    2009-03-01

    This study presents the results of the Rayleigh wave group velocity tomography in North-China performed using ambient seismic noise observed at 190 broadband and 10 very broadband stations of the North-China Seismic Array. All available vertical component time-series for the 14 months span between January, 2007 and February, 2008 are cross-correlated to obtain empirical Rayleigh wave Green functions that are subsequently processed, with the multiple filter method, to isolate the group velocity dispersion curves of the fundamental mode of Rayleigh wave. Tomographic maps, with a grid spacing of 0.25 deg. x 0.25 deg., are computed at the periods of 4.5s, 12s, 20s, 28s. The maps at short periods reveal an evident lateral heterogeneity in the crust of North-China, quite well in agreement with known geological and tectonic features. The North China Basin is imaged as a broad low velocity area, while the Taihangshan and Yanshan uplifts and Ordos block are imaged as high velocity zones, and the Quaternary intermountain basins show up as small low-velocity anomalies. The group velocity contours at 4.5s, 12s and 20s are consistent with the Bouguer gravity anomalies measured in the area of the Taihangshan fault, that cuts through the lower crust at least. Most of the historical strong earthquakes (M≥6.0) are located where the tomographic maps show zones with moderate velocity gradient. (author)

  6. Effect of oxygen concentration on human embryo development evaluated by time-lapse monitoring

    DEFF Research Database (Denmark)

    Ingerslev, Hans Jakob; Hindkjær, Johnny Juhl; Kirkegaard, Kirstine

    2012-01-01

    -points for each cell division and blastocyst stages were registered until 120 hours after oocyte retrieval. Only 2PN embryos completing the first cleavage were evaluated. The groups were compared using one-way ANOVA or Kruskall-Wallis test. Estimates are reported as medians with 95% confidence intervals. Time......Introduction: Data from a number of studies indicate -but not unequivocally- that culture of embryos in 5% O2 compared to 20% O2 improves blastocyst formation in humans and various animal species and may yield better pregnancy rates in IVF. The detrimental effects of atmospheric oxygen were...... was to evaluate the influence of oxygen tension on human pre-implantation development using time-lapse monitoring. Materials and methods: Human embryos were cultured to the blastocyst stage in a time-lapse incubator (EmbryoScope™) in 20% O2 (group 1), 20% O2 for 24 hours followed by culture in 5% O2 (group 2...

  7. Capturing tissue repair in zebrafish larvae with time-lapse brightfield stereomicroscopy.

    Science.gov (United States)

    Lisse, Thomas S; Brochu, Elizabeth A; Rieger, Sandra

    2015-01-31

    The zebrafish larval tail fin is ideal for studying tissue regeneration due to the simple architecture of the larval fin-fold, which comprises of two layers of skin that enclose undifferentiated mesenchyme, and because the larval tail fin regenerates rapidly within 2-3 days. Using this system, we demonstrate a method for capturing the repair dynamics of the amputated tail fin with time-lapse video brightfield stereomicroscopy. We demonstrate that fin amputation triggers a contraction of the amputation wound and extrusion of cells around the wound margin, leading to their subsequent clearance. Fin regeneration proceeds from proximal to distal direction after a short delay. In addition, developmental growth of the larva can be observed during all stages. The presented method provides an opportunity for observing and analyzing whole tissue-scale behaviors such as fin development and growth in a simple microscope setting, which is easily adaptable to any stereomicroscope with time-lapse capabilities.

  8. Freeze core sampling to validate time-lapse resistivity monitoring of the hyporheic zone.

    Science.gov (United States)

    Toran, Laura; Hughes, Brian; Nyquist, Jonathan; Ryan, Robert

    2013-01-01

    A freeze core sampler was used to characterize hyporheic zone storage during a stream tracer test. The pore water from the frozen core showed tracer lingered in the hyporheic zone after the tracer had returned to background concentration in collocated well samples. These results confirmed evidence of lingering subsurface tracer seen in time-lapse electrical resistivity tomographs. The pore water exhibited brine exclusion (ion concentrations in ice lower than source water) in a sediment matrix, despite the fast freezing time. Although freeze core sampling provided qualitative evidence of lingering tracer, it proved difficult to quantify tracer concentration because the amount of brine exclusion during freezing could not be accurately determined. Nonetheless, the additional evidence for lingering tracer supports using time-lapse resistivity to detect regions of low fluid mobility within the hyporheic zone that can act as chemically reactive zones of importance in stream health. © 2012, The Author(s). GroundWater © 2012, National Ground Water Association.

  9. Shear wave velocity versus quality factor: results from seismic noise recordings

    Science.gov (United States)

    Boxberger, Tobias; Pilz, Marco; Parolai, Stefano

    2017-08-01

    The assessment of the shear wave velocity (vs) and shear wave quality factor (Qs) for the shallow structure below a site is necessary to characterize its site response. In the past, methods based on the analysis of seismic noise have been shown to be very efficient for providing a sufficiently accurate estimation of the vs versus depth at reasonable costs for engineering seismology purposes. In addition, a slight modification of the same method has proved to be able to provide realistic Qs versus depth estimates. In this study, data sets of seismic noise recorded by microarrays of seismic stations in different geological environments of Europe and Central Asia are used to calculate both vs and Qs versus depth profiles. Analogous to the generally adopted approach in seismic hazard assessment for mapping the average shear wave velocity in the uppermost 30 m (vs30) as a proxy of the site response, this approach was also applied to the quality factor within the uppermost 30 m (Qs30). A slightly inverse correlation between both parameters is found based on a methodological consistent determination for different sites. Consequently, a combined assessment of vs and Qs by seismic noise analysis has the potential to provide a more comprehensive description of the geological structure below a site.

  10. Relative Seismic Velocity Variations Correlate with Deformation at Kīlauea Volcano.

    Science.gov (United States)

    Donaldson, C.; Caudron, C.; Green, R. G.; White, R. S.

    2016-12-01

    Passive interferometry using ambient seismic noise is an appealing monitoring tool at volcanoes. The continuous nature of seismic noise provides better temporal resolution than earthquake interferometry and ambient noise may be sensitive to changes at depths that do not deform the volcano surface. Despite this, to our knowledge, no studies have yet comprehensively compared deformation and velocity at a volcano over a significant length of time. We use a volcanic tremor source (approximately 0.3 - 1.0 Hz) at Kīlauea volcano as a source for interferometry to measure relative velocity changes with time. The tremor source that dominates the cross correlations is located under the Halema'uma'u caldera at Kīlauea summit. By cross-correlating the vertical component of day-long seismic records between 200 pairs of stations, we extract coherent and temporally consistent coda wave signals with time lags of up to 70 seconds. Our resulting time series of relative velocity shows a remarkable correlation with the tilt record measured at Kīlauea summit. Kīlauea summit is continually inflating and deflating as the level of the lava lake rises and falls. During these deflation-inflation (DI) events the tilt increases (inflation), as the velocity increases, on the scale of days to weeks. In contrast, we also detect a longer-term velocity decrease between 2011-2015 as the volcano slowly inflates. We suggest that variations in velocity result from opening and closing cracks and pores due to changes in magma pressurization. Early modeling results indicate that pressurizing magma reservoirs at different depths can result in opposite changes in compression/extension at the surface. The consistent correlation of relative velocity and deformation in this study provides an opportunity to better understand the mechanism causing velocity changes, which currently limits the scope of passive interferometry as a monitoring tool.

  11. Informing hydrological models with ground-based time-lapse relative gravimetry: potential and limitations

    DEFF Research Database (Denmark)

    Bauer-Gottwein, Peter; Christiansen, Lars; Rosbjerg, Dan

    2011-01-01

    parameter uncertainty decreased significantly when TLRG data was included in the inversion. The forced infiltration experiment caused changes in unsaturated zone storage, which were monitored using TLRG and ground-penetrating radar. A numerical unsaturated zone model was subsequently conditioned on both......Coupled hydrogeophysical inversion emerges as an attractive option to improve the calibration and predictive capability of hydrological models. Recently, ground-based time-lapse relative gravity (TLRG) measurements have attracted increasing interest because there is a direct relationship between...

  12. Assessment of Time-Lapse in Visible and Thermal Face Recognition

    Czech Academy of Sciences Publication Activity Database

    Farokhi, Sajad; Shamsuddin, Siti Mariyam; Flusser, Jan; Sheikh, Usman Ullah

    2012-01-01

    Roč. 6, č. 1 (2012), s. 181-186 R&D Projects: GA ČR GAP103/11/1552 Institutional support: RVO:67985556 Keywords : face recognition * moment invariants * Zernike moments Subject RIV: JD - Computer Applications, Robotics http://library.utia.cas.cz/separaty/2012/ZOI/flusser-assessment of time-lapse in visible and thermal face recognition -j.pdf

  13. Unscented Kalman filter assimilation of time-lapse self-potential data for monitoring solute transport

    Science.gov (United States)

    Cui, Yi-an; Liu, Lanbo; Zhu, Xiaoxiong

    2017-08-01

    Monitoring the extent and evolution of contaminant plumes in local and regional groundwater systems from existing landfills is critical in contamination control and remediation. The self-potential survey is an efficient and economical nondestructive geophysical technique that can be used to investigate underground contaminant plumes. Based on the unscented transform, we have built a Kalman filtering cycle to conduct time-lapse data assimilation for monitoring the transport of solute based on the solute transport experiment using a bench-scale physical model. The data assimilation was formed by modeling the evolution based on the random walk model and observation correcting based on the self-potential forward. Thus, monitoring self-potential data can be inverted by the data assimilation technique. As a result, we can reconstruct the dynamic process of the contaminant plume instead of using traditional frame-to-frame static inversion, which may cause inversion artifacts. The data assimilation inversion algorithm was evaluated through noise-added synthetic time-lapse self-potential data. The result of the numerical experiment shows validity, accuracy and tolerance to the noise of the dynamic inversion. To validate the proposed algorithm, we conducted a scaled-down sandbox self-potential observation experiment to generate time-lapse data that closely mimics the real-world contaminant monitoring setup. The results of physical experiments support the idea that the data assimilation method is a potentially useful approach for characterizing the transport of contamination plumes using the unscented Kalman filter (UKF) data assimilation technique applied to field time-lapse self-potential data.

  14. Evaluating four-dimensional time-lapse electrical resistivity tomography for monitoring DNAPL source zone remediation.

    Science.gov (United States)

    Power, Christopher; Gerhard, Jason I; Karaoulis, Marios; Tsourlos, Panagiotis; Giannopoulos, Antonios

    2014-07-01

    Practical, non-invasive tools do not currently exist for mapping the remediation of dense non-aqueous phase liquids (DNAPLs). Electrical resistivity tomography (ERT) exhibits significant potential but has not yet become a practitioner's tool due to challenges in interpreting the survey results at real sites. This study explores the effectiveness of recently developed four-dimensional (4D, i.e., 3D space plus time) time-lapse surface ERT to monitor DNAPL source zone remediation. A laboratory experiment demonstrated the approach for mapping a changing NAPL distribution over time. A recently developed DNAPL-ERT numerical model was then employed to independently simulate the experiment, providing confidence that the DNAPL-ERT model is a reliable tool for simulating real systems. The numerical model was then used to evaluate the potential for this approach at the field scale. Four DNAPL source zones, exhibiting a range of complexity, were initially simulated, followed by modeled time-lapse ERT monitoring of complete DNAPL remediation by enhanced dissolution. 4D ERT inversion provided estimates of the regions of the source zone experiencing mass reduction with time. Results show that 4D time-lapse ERT has significant potential to map both the outline and the center of mass of the evolving treated portion of the source zone to within a few meters in each direction. In addition, the technique can provide a reasonable, albeit conservative, estimate of the DNAPL volume remediated with time: 25% underestimation in the upper 2m and up to 50% underestimation at late time between 2 and 4m depth. The technique is less reliable for identifying cleanup of DNAPL stringers outside the main DNAPL body. Overall, this study demonstrates that 4D time-lapse ERT has potential for mapping where and how quickly DNAPL mass changes in real time during site remediation. Copyright © 2014 Elsevier B.V. All rights reserved.

  15. Time-lapse electrical surveys to locate infiltration zones in weathered hard rock tropical areas

    Science.gov (United States)

    Wubda, M.; Descloitres, M.; Yalo, N.; Ribolzi, O.; Vouillamoz, J. M.; Boukari, M.; Hector, B.; Séguis, L.

    2017-07-01

    In West Africa, infiltration and groundwater recharge processes in hard rock areas are depending on climatic, surface and subsurface conditions, and are poorly documented. Part of the reason is that identification, location and monitoring of these processes is still a challenge. Here, we explore the potential for time-lapse electrical surveys to bring additional information on these processes for two different climate situations: a semi-arid Sahelian site (north of Burkina and a humid Sudanian site (north of Benin), respectively focusing on indirect (localized) and direct (diffuse) recharge processes. The methodology is based on surveys in dry season and rainy season on typical pond or gully using Electrical Resistivity Tomography (ERT) and frequency electromagnetic (FEM) apparent conductivity mapping. The results show that in the Sahelian zone an indirect recharge occurs as expected, but infiltration doesn't takes place at the center of the pond to the aquifer, but occurs laterally in the banks. In Sudanian zone, the ERT survey shows a direct recharge process as expected, but also a complicated behavior of groundwater dilution, as well as the role of hardpans for fast infiltration. These processes are ascertained by groundwater monitoring in adjacent observing wells. At last, FEM time lapse mapping is found to be difficult to quantitatively interpreted due to the non-uniqueness of the model, clearly evidenced comparing FEM result to auger holes monitoring. Finally, we found that time-lapse ERT can be an efficient way to track infiltration processes across ponds and gullies in both climatic conditions, the Sahelian setting providing results easier to interpret, due to significant resistivity contrasts between dry and rain seasons. Both methods can be used for efficient implementation of punctual sensors for complementary studies. However, FEM time-lapse mapping remains difficult to practice without external information that renders this method less attractive for

  16. Probabilistic 3-D time-lapse inversion of magnetotelluric data: Application to an enhanced geothermal system

    Science.gov (United States)

    Rosas-Carbajal, Marina; Linde, Nicolas; Peacock, Jared R.; Zyserman, F. I.; Kalscheuer, Thomas; Thiel, Stephan

    2015-01-01

    Surface-based monitoring of mass transfer caused by injections and extractions in deep boreholes is crucial to maximize oil, gas and geothermal production. Inductive electromagnetic methods, such as magnetotellurics, are appealing for these applications due to their large penetration depths and sensitivity to changes in fluid conductivity and fracture connectivity. In this work, we propose a 3-D Markov chain Monte Carlo inversion of time-lapse magnetotelluric data to image mass transfer following a saline fluid injection. The inversion estimates the posterior probability density function of the resulting plume, and thereby quantifies model uncertainty. To decrease computation times, we base the parametrization on a reduced Legendre moment decomposition of the plume. A synthetic test shows that our methodology is effective when the electrical resistivity structure prior to the injection is well known. The centre of mass and spread of the plume are well retrieved.We then apply our inversion strategy to an injection experiment in an enhanced geothermal system at Paralana, South Australia, and compare it to a 3-D deterministic time-lapse inversion. The latter retrieves resistivity changes that are more shallow than the actual injection interval, whereas the probabilistic inversion retrieves plumes that are located at the correct depths and oriented in a preferential north-south direction. To explain the time-lapse data, the inversion requires unrealistically large resistivity changes with respect to the base model. We suggest that this is partly explained by unaccounted subsurface heterogeneities in the base model from which time-lapse changes are inferred.

  17. Calixarenes and cations: a time-lapse photography of the big-bang.

    Science.gov (United States)

    Casnati, Alessandro

    2013-08-07

    The outstanding cation complexation properties emerging from the pioneering studies on calixarene ligands during a five-year period in the early 1980s triggered a big-bang burst of publications on such macrocycles that is still lasting at a distance of more than 30 years. A time-lapse photography of this timeframe is proposed which allows the readers to pinpoint the contributions of the different research groups.

  18. Time-lapse misorientation maps for the analysis of electron backscatter diffraction data from evolving microstructures

    International Nuclear Information System (INIS)

    Wheeler, J.; Cross, A.; Drury, M.; Hough, R.M.; Mariani, E.; Piazolo, S.; Prior, D.J.

    2011-01-01

    A 'time-lapse misorientation map' is defined here as a map which shows the orientation change at each point in an evolving crystalline microstructure between two different times. Electron backscatter diffraction data from in situ heating experiments can be used to produce such maps, which then highlight areas of microstructural change and also yield statistics indicative of how far different types of boundary (with different misorientations) have moved.

  19. Precursory changes in seismic velocity for the spectrum of earthquake failure modes

    Science.gov (United States)

    Scuderi, M.M.; Marone, C.; Tinti, E.; Di Stefano, G.; Collettini, C.

    2016-01-01

    Temporal changes in seismic velocity during the earthquake cycle have the potential to illuminate physical processes associated with fault weakening and connections between the range of fault slip behaviors including slow earthquakes, tremor and low frequency earthquakes1. Laboratory and theoretical studies predict changes in seismic velocity prior to earthquake failure2, however tectonic faults fail in a spectrum of modes and little is known about precursors for those modes3. Here we show that precursory changes of wave speed occur in laboratory faults for the complete spectrum of failure modes observed for tectonic faults. We systematically altered the stiffness of the loading system to reproduce the transition from slow to fast stick-slip and monitored ultrasonic wave speed during frictional sliding. We find systematic variations of elastic properties during the seismic cycle for both slow and fast earthquakes indicating similar physical mechanisms during rupture nucleation. Our data show that accelerated fault creep causes reduction of seismic velocity and elastic moduli during the preparatory phase preceding failure, which suggests that real time monitoring of active faults may be a means to detect earthquake precursors. PMID:27597879

  20. Inversion of time-domain induced polarization data based on time-lapse concept

    Science.gov (United States)

    Kim, Bitnarae; Nam, Myung Jin; Kim, Hee Joon

    2018-05-01

    Induced polarization (IP) surveys, measuring overvoltage phenomena of the medium, are widely and increasingly performed not only for exploration of mineral resources but also for engineering applications. Among several IP survey methods such as time-domain, frequency-domain and spectral IP surveys, this study introduces a noble inversion method for time-domain IP data to recover the chargeability structure of target medium. The inversion method employs the concept of 4D inversion of time-lapse resistivity data sets, considering the fact that measured voltage in time-domain IP survey is distorted by IP effects to increase from the instantaneous voltage measured at the moment the source current injection starts. Even though the increase is saturated very fast, we can consider the saturated and instantaneous voltages as a time-lapse data set. The 4D inversion method is one of the most powerful method for inverting time-lapse resistivity data sets. Using the developed IP inversion algorithm, we invert not only synthetic but also field IP data to show the effectiveness of the proposed method by comparing the recovered chargeability models with those from linear inversion that was used for the inversion of the field data in a previous study. Numerical results confirm that the proposed inversion method generates reliable chargeability models even though the anomalous bodies have large IP effects.

  1. Seismic velocity uncertainties and their effect on geothermal predictions: A case study

    Science.gov (United States)

    Rabbel, Wolfgang; Köhn, Daniel; Bahadur Motra, Hem; Niederau, Jan; Thorwart, Martin; Wuttke, Frank; Descramble Working Group

    2017-04-01

    Geothermal exploration relies in large parts on geophysical subsurface models derived from seismic reflection profiling. These models are the framework of hydro-geothermal modeling, which further requires estimating thermal and hydraulic parameters to be attributed to the seismic strata. All petrophysical and structural properties involved in this process can be determined only with limited accuracy and thus impose uncertainties onto the resulting model predictions of temperature-depth profiles and hydraulic flow, too. In the present study we analyze sources and effects of uncertainties of the seismic velocity field, which translate directly into depth uncertainties of the hydraulically and thermally relevant horizons. Geological sources of these uncertainties are subsurface heterogeneity and seismic anisotropy, methodical sources are limitations in spread length and physical resolution. We demonstrate these effects using data of the EU-Horizon 2020 project DESCRAMBLE investigating a shallow super-critical geothermal reservoir in the Larderello area. The study is based on 2D- and 3D seismic reflection data and laboratory measurements on representative rock samples under simulated in-situ conditions. The rock samples consistently show P-wave anisotropy values of 10-20% order of magnitude. However, the uncertainty of layer depths induced by anisotropy is likely to be lower depending on the accuracy, with which the spatial orientation of bedding planes can be determined from the seismic reflection images.

  2. Modeling continuous seismic velocity changes due to ground shaking in Chile

    Science.gov (United States)

    Gassenmeier, Martina; Richter, Tom; Sens-Schönfelder, Christoph; Korn, Michael; Tilmann, Frederik

    2015-04-01

    In order to investigate temporal seismic velocity changes due to earthquake related processes and environmental forcing, we analyze 8 years of ambient seismic noise recorded by the Integrated Plate Boundary Observatory Chile (IPOC) network in northern Chile between 18° and 25° S. The Mw 7.7 Tocopilla earthquake in 2007 and the Mw 8.1 Iquique earthquake in 2014 as well as numerous smaller events occurred in this area. By autocorrelation of the ambient seismic noise field, approximations of the Green's functions are retrieved. The recovered function represents backscattered or multiply scattered energy from the immediate neighborhood of the station. To detect relative changes of the seismic velocities we apply the stretching method, which compares individual autocorrelation functions to stretched or compressed versions of a long term averaged reference autocorrelation function. We use time windows in the coda of the autocorrelations, that contain scattered waves which are highly sensitive to minute changes in the velocity. At station PATCX we observe seasonal changes in seismic velocity as well as temporary velocity reductions in the frequency range of 4-6 Hz. The seasonal changes can be attributed to thermal stress changes in the subsurface related to variations of the atmospheric temperature. This effect can be modeled well by a sine curve and is subtracted for further analysis of short term variations. Temporary velocity reductions occur at the time of ground shaking usually caused by earthquakes and are followed by a recovery. We present an empirical model that describes the seismic velocity variations based on continuous observations of the local ground acceleration. Our hypothesis is that not only the shaking of earthquakes provokes velocity drops, but any small vibrations continuously induce minor velocity variations that are immediately compensated by healing in the steady state. We show that the shaking effect is accumulated over time and best described by

  3. Post-seismic velocity changes following the 2010 Mw 7.1 Darfield earthquake, New Zealand, revealed by ambient seismic field analysis

    Science.gov (United States)

    Heckels, R. EG; Savage, M. K.; Townend, J.

    2018-05-01

    Quantifying seismic velocity changes following large earthquakes can provide insights into fault healing and reloading processes. This study presents temporal velocity changes detected following the 2010 September Mw 7.1 Darfield event in Canterbury, New Zealand. We use continuous waveform data from several temporary seismic networks lying on and surrounding the Greendale Fault, with a maximum interstation distance of 156 km. Nine-component, day-long Green's functions were computed for frequencies between 0.1 and 1.0 Hz for continuous seismic records from immediately after the 2010 September 04 earthquake until 2011 January 10. Using the moving-window cross-spectral method, seismic velocity changes were calculated. Over the study period, an increase in seismic velocity of 0.14 ± 0.04 per cent was determined near the Greendale Fault, providing a new constraint on post-seismic relaxation rates in the region. A depth analysis further showed that velocity changes were confined to the uppermost 5 km of the subsurface. We attribute the observed changes to post-seismic relaxation via crack healing of the Greendale Fault and throughout the surrounding region.

  4. History Matching of 4D Seismic Data Attributes using the Ensemble Kalman Filter

    KAUST Repository

    Ravanelli, Fabio M.

    2013-05-01

    One of the most challenging tasks in the oil industry is the production of reliable reservoir forecast models. Because of different sources of uncertainties the numerical models employed are often only crude approximations of the reality. This problem is tackled by the conditioning of the model with production data through data assimilation. This process is known in the oil industry as history matching. Several recent advances are being used to improve history matching reliability, notably the use of time-lapse seismic data and automated history matching software tools. One of the most promising data assimilation techniques employed in the oil industry is the ensemble Kalman filter (EnKF) because its ability to deal with highly non-linear models, low computational cost and easy computational implementation when compared with other methods. A synthetic reservoir model was used in a history matching study designed to predict the peak production allowing decision makers to properly plan field development actions. If only production data is assimilated, a total of 12 years of historical data is required to properly characterize the production uncertainty and consequently the correct moment to take actions and decommission the field. However if time-lapse seismic data is available this conclusion can be reached 4 years in advance due to the additional fluid displacement information obtained with the seismic data. Production data provides geographically sparse data in contrast with seismic data which are sparse in time. Several types of seismic attributes were tested in this study. Poisson’s ratio proved to be the most sensitive attribute to fluid displacement. In practical applications, however the use of this attribute is usually avoided due to poor quality of the data. Seismic impedance tends to be more reliable. Finally, a new conceptual idea was proposed to obtain time-lapse information for a history matching study. The use of crosswell time-lapse seismic

  5. Inter-laboratory agreement on embryo classification and clinical decision: Conventional morphological assessment vs. time lapse.

    Science.gov (United States)

    Martínez-Granados, Luis; Serrano, María; González-Utor, Antonio; Ortíz, Nereyda; Badajoz, Vicente; Olaya, Enrique; Prados, Nicolás; Boada, Montse; Castilla, Jose A

    2017-01-01

    The aim of this study is to determine inter-laboratory variability on embryo assessment using time-lapse platform and conventional morphological assessment. This study compares the data obtained from a pilot study of external quality control (EQC) of time lapse, performed in 2014, with the classical EQC of the Spanish Society for the Study of Reproductive Biology (ASEBIR) performed in 2013 and 2014. In total, 24 laboratories (8 using EmbryoScope™, 15 using Primo Vision™ and one with both platforms) took part in the pilot study. The clinics that used EmbryoScope™ analysed 31 embryos and those using Primo Vision™ analysed 35. The classical EQC was implemented by 39 clinics, based on an analysis of 25 embryos per year. Both groups were required to evaluate various qualitative morphological variables (cell fragmentation, the presence of vacuoles, blastomere asymmetry and multinucleation), to classify the embryos in accordance with ASEBIR criteria and to stipulate the clinical decision taken. In the EQC time-lapse pilot study, the groups were asked to determine, as well as the above characteristics, the embryo development times, the number, opposition and size of pronuclei, the direct division of 1 into 3 cells and/or of 3 into 5 cells and false divisions. The degree of agreement was determined by calculating the intra-class correlation coefficients and the coefficient of variation for the quantitative variables and the Gwet index for the qualitative variables. For both EmbryoScope™ and Primo Vision™, two periods of greater inter-laboratory variability were observed in the times of embryo development events. One peak of variability was recorded among the laboratories addressing the first embryo events (extrusion of the second polar body and the appearance of pronuclei); the second peak took place between the times corresponding to the 8-cell and morula stages. In most of the qualitative variables analysed regarding embryo development, there was almost

  6. Inter-laboratory agreement on embryo classification and clinical decision: Conventional morphological assessment vs. time lapse.

    Directory of Open Access Journals (Sweden)

    Luis Martínez-Granados

    Full Text Available The aim of this study is to determine inter-laboratory variability on embryo assessment using time-lapse platform and conventional morphological assessment. This study compares the data obtained from a pilot study of external quality control (EQC of time lapse, performed in 2014, with the classical EQC of the Spanish Society for the Study of Reproductive Biology (ASEBIR performed in 2013 and 2014. In total, 24 laboratories (8 using EmbryoScope™, 15 using Primo Vision™ and one with both platforms took part in the pilot study. The clinics that used EmbryoScope™ analysed 31 embryos and those using Primo Vision™ analysed 35. The classical EQC was implemented by 39 clinics, based on an analysis of 25 embryos per year. Both groups were required to evaluate various qualitative morphological variables (cell fragmentation, the presence of vacuoles, blastomere asymmetry and multinucleation, to classify the embryos in accordance with ASEBIR criteria and to stipulate the clinical decision taken. In the EQC time-lapse pilot study, the groups were asked to determine, as well as the above characteristics, the embryo development times, the number, opposition and size of pronuclei, the direct division of 1 into 3 cells and/or of 3 into 5 cells and false divisions. The degree of agreement was determined by calculating the intra-class correlation coefficients and the coefficient of variation for the quantitative variables and the Gwet index for the qualitative variables. For both EmbryoScope™ and Primo Vision™, two periods of greater inter-laboratory variability were observed in the times of embryo development events. One peak of variability was recorded among the laboratories addressing the first embryo events (extrusion of the second polar body and the appearance of pronuclei; the second peak took place between the times corresponding to the 8-cell and morula stages. In most of the qualitative variables analysed regarding embryo development, there

  7. Measurement Of Compressional-Wave Seismic Velocities In 29 Wells At The Hanford Site

    International Nuclear Information System (INIS)

    Peterson, S.W.

    2010-01-01

    Check shot seismic velocity surveys were collected in 100 B/C, 200 East, 200-PO-1 Operational Unit (OU), and the Gable Gap areas in order to provide time-depth correlation information to aid the interpretation of existing seismic reflection data acquired at the Hanford Site (Figure 1). This report details results from 5 wells surveyed in fiscal year (FY) 2008, 7 wells in FY 2009, and 17 wells in FY 2010 and provides summary compressional-wave seismic velocity information to help guide future seismic survey design as well as improve current interpretations of the seismic data (SSC 1979/1980; SGW-39675; SGW-43746). Augmenting the check shot database are four surveys acquired in 2007 in support of the Bechtel National, Inc. Waste Treatment Plant construction design (PNNL-16559, PNNL-16652), and check shot surveys in three wells to support seismic testing in the 200 West Area (Waddell et al., 1999). Additional sonic logging was conducted during the late 1970s and early 1980s as part of the Basalt Waste Isolation Program (BWIP) (SSC 1979/1980) and check shot/sonic surveys as part of the safety report for the Skagit/Hanford Nuclear project (RDH/10-AMCP-0164). Check shot surveys are used to obtain an in situ measure of compressional-wave seismic velocity for sediment and rock in the vicinity of the well point, and provide the seismic-wave travel time to geologic horizons of interest. The check shot method deploys a downhole seismic receiver (geophone) to record the arrival of seismic waves generated by a source at the ground surface. The travel time of the first arriving seismic-wave is determined and used to create a time-depth function to correlate encountered geologic intervals with the seismic data. This critical tie with the underlying geology improves the interpretation of seismic reflection profile information. Fieldwork for this investigation was conducted by in house staff during the weeks of September 22, 2008 for 5 wells in the 200 East Area (Figure 2); June 1

  8. Influence of apparent wave velocity on seismic performance of a super-long-span triple-tower suspension bridge

    Directory of Open Access Journals (Sweden)

    Hao Wang

    2015-06-01

    Full Text Available As one of the main characteristics of seismic waves, apparent wave velocity has great influence on seismic responses of long-span suspension bridges. Understanding these influences is important for seismic design. In this article, the critical issues concerning the traveling wave effect analysis are first reviewed. Taizhou Bridge, the longest triple-tower suspension bridge in the world, is then taken as an example for this investigation. A three-dimensional finite element model of the bridge is established in ABAQUS, and the LANCZOS eigenvalue solver is employed to calculate the structural dynamic characteristics. Traveling wave effect on seismic responses of these long-span triple-tower suspension bridges is investigated. Envelopes of seismic shear force and moment in the longitudinal direction along the three towers, relative displacements between the towers and the girder, and reaction forces at the bottoms of the three towers under different apparent wave velocities are calculated and presented in detail. The results show that the effect of apparent wave velocity on the seismic responses of triple-tower suspension bridge fluctuates when the velocity is lower than 2000 m/s, and the effects turn stable when the velocity becomes larger. In addition, the effects of traveling wave are closely related to spectral characteristics and propagation direction of the seismic wave, and seismic responses of components closer to the source are relatively larger. Therefore, reliable estimation of the seismic input and apparent wave velocity according to the characteristics of the bridge site are significant for accurate prediction of seismic responses. This study provides critical reference for seismic analysis and design of long-span triple-tower suspension bridges.

  9. Combining deterministic and stochastic velocity fields in the analysis of deep crustal seismic data

    Science.gov (United States)

    Larkin, Steven Paul

    Standard crustal seismic modeling obtains deterministic velocity models which ignore the effects of wavelength-scale heterogeneity, known to exist within the Earth's crust. Stochastic velocity models are a means to include wavelength-scale heterogeneity in the modeling. These models are defined by statistical parameters obtained from geologic maps of exposed crystalline rock, and are thus tied to actual geologic structures. Combining both deterministic and stochastic velocity models into a single model allows a realistic full wavefield (2-D) to be computed. By comparing these simulations to recorded seismic data, the effects of wavelength-scale heterogeneity can be investigated. Combined deterministic and stochastic velocity models are created for two datasets, the 1992 RISC seismic experiment in southeastern California and the 1986 PASSCAL seismic experiment in northern Nevada. The RISC experiment was located in the transition zone between the Salton Trough and the southern Basin and Range province. A high-velocity body previously identified beneath the Salton Trough is constrained to pinch out beneath the Chocolate Mountains to the northeast. The lateral extent of this body is evidence for the ephemeral nature of rifting loci as a continent is initially rifted. Stochastic modeling of wavelength-scale structures above this body indicate that little more than 5% mafic intrusion into a more felsic continental crust is responsible for the observed reflectivity. Modeling of the wide-angle RISC data indicates that coda waves following PmP are initially dominated by diffusion of energy out of the near-surface basin as the wavefield reverberates within this low-velocity layer. At later times, this coda consists of scattered body waves and P to S conversions. Surface waves do not play a significant role in this coda. Modeling of the PASSCAL dataset indicates that a high-gradient crust-mantle transition zone or a rough Moho interface is necessary to reduce precritical Pm

  10. 4-D seismic in a complex fluvial reservoir: the Snorre feasibility study

    NARCIS (Netherlands)

    Smith, P.; Berg, J.I.; Eidsvig, S.; Magnus, I.; Verhelst, F.J.P.C.M.G.; Helgesen, J.

    2001-01-01

    The saga petroleum, discoverer of Snorre Field, describe's how 3-D seismic surveys are used to determine the value of time-lapse seismic data for field management. Careful examination of the repeatability of the time-lapse data sets, before interpretation stark, establishes a framework defining the

  11. 4D seismic reservoir characterization, integrated with geo-mechanical modelling

    NARCIS (Netherlands)

    Angelov, P.V.

    2009-01-01

    Hydrocarbon production induces time-lapse changes in the seismic attributes (travel time and amplitude) both at the level of the producing reservoir and in the surrounding rock. The detected time-lapse changes in the seismic are induced from the changes in the petrophysical properties of the rock,

  12. A Study on the Compatibility of 3-D Seismic Velocity Structures with Gravity Data of Taiwan

    Directory of Open Access Journals (Sweden)

    Horng-Yuan Yen Hsien-Hsiang Hsieh

    2010-01-01

    Full Text Available The Bouguer anomaly of Taiwan has been revised in this study based on more accurate terrain data provided by the Taiwanese Digital Terrain Model compiled by the Taiwan Forestry Bureau. Three seismic velocity models, those determined by Rau and Wu (1995, Kim et al. (2005, and Wu et al. (2007 respectively, were selected for our study. We converted their velocity models to density models using the relationship between P-wave velocity and rock density proposed by Ludwig et al. (1970 and Barton (1986, and then calculated their corresponding gravity anomalies. According to the correlation coefficient between the Bouguer anomalies calculated from the velocity models and the revised Bouguer anomalies, the Kim et al. model was more compatible with gravity data than the other two velocity models. The differences between the revised gravity anomaly and the calculated gravity anomalies trend toward positive values at elevations higher than 2000 m. This indicates that the velocities at the shallower depths beneath the mountainous area of the three models are overdetermined, i.e., higher than the real velocities. This ratiocination implies that the crustal thickness beneath the Central Range is less than 55 km which was obtained from the velocity models.

  13. Shear-wave velocity of marine sediments offshore Taiwan using ambient seismic noise

    Science.gov (United States)

    Lin, Yu-Tse; Lin, Jing-Yi; Kuo-Chen, Hao; Yeh, Yi-Chin; Cheng, Win-Bin

    2017-04-01

    Seismic ambient noise technology has many advantages over the traditional two-station method. The most important one is that noise is happening all the time and it can be widely and evenly distributed. Thus, the Green's Function of any station pair can be obtained through the data cross-correlation process. Many related studies have been performed to estimate the velocity structures based on the inland area. Only a few studies were reported for the marine area due to the relatively shorter recording time of ocean bottom seismometers (OBS) deployment and the high cost of the marine experiment. However, the understanding about the shear-wave velocity (Vs) of the marine sediments is very crucial for the hazard assessment related to submarine landslides, particularly with the growing of submarine resources exploration. In this study, we applied the ambient noise technique to four OBS seismic networks located offshore Taiwan in the aim of getting more information about the noise sources and having the preliminary estimation for the Vs of the marine sediments. Two of the seismic networks were deployed in the NE part of Taiwan, near the Ryukyu subduction system, whereas the others were in the SW area, on the continental margin rich in gas hydrate. Generally, ambient seismic noise could be associated with wind, ocean waves, rock fracturing and anthropogenic activity. In the southwestern Taiwan, the cross-correlation function obtained from two seismic networks indicate similar direction, suggestion that the source from the south part of the network could be the origin of the noise. However, the two networks in the northeastern Taiwan show various source direction, which could be caused by the abrupt change of bathymetry or the volcanic degassing effect frequently observed by the marine geophysical method in the area. The Vs determined from the dispersion curve shows a relatively higher value for the networks in the Okinawa Trough (OT) off NE Taiwan than that in the

  14. Seismic Velocity Structure across the Hayward Fault Zone Near San Leandro, California

    Science.gov (United States)

    Strayer, L. M.; Catchings, R.; Chan, J. H.; Richardson, I. S.; McEvilly, A.; Goldman, M.; Criley, C.; Sickler, R. R.

    2017-12-01

    In Fall 2016 we conducted the East Bay Seismic Investigation, a NEHRP-funded collaboration between California State University, East Bay and the United State Geological Survey. The study produced a large volume of seismic data, allowing us to examine the subsurface across the East Bay plain and hills using a variety of geophysical methods. We know of no other survey performed in the past that has imaged this area, at this scale, and with this degree of resolution. Initial models show that seismic velocities of the Hayward Fault Zone (HFZ), the East Bay plain, and the East Bay hills are illuminated to depths of 5-6 km. We used explosive sources at 1-km intervals along a 15-km-long, NE-striking ( 055°), seismic line centered on the HFZ. Vertical- and horizontal-component sensors were spaced at 100 m intervals along the entire profile, with vertical-component sensors at 20 m intervals across mapped or suspected faults. Preliminary seismic refraction tomography across the HFZ, sensu lato, (includes sub-parallel, connected, and related faults), shows that the San Leandro Block (SLB) is a low-velocity feature in the upper 1-3 km, with nearly the same Vp as the adjacent Great Valley sediments to the east, and low Vs values. In our initial analysis we can trace the SLB and its bounding faults (Hayward, Chabot) nearly vertically, to at least 2-4 km depth. Similarly, preliminary migrated reflection images suggest that many if not all of the peripheral reverse, strike-slip and oblique-slip faults of the wider HFZ dip toward the SLB, into a curtain of relocated epicenters that define the HFZ at depth, indicative of a `flower-structure'. Preliminary Vs tomography identifies another apparently weak zone at depth, located about 1.5 km east of the San Leandro shoreline, that may represent the northward continuation of the Silver Creek Fault. Centered 4 km from the Bay, there is a distinctive, 2 km-wide, uplifted, horst-like, high-velocity structure (both Vp & Vs) that bounds the

  15. Crustal velocity structure of central Gansu Province from regional seismic waveform inversion using firework algorithm

    Science.gov (United States)

    Chen, Yanyang; Wang, Yanbin; Zhang, Yuansheng

    2017-04-01

    The firework algorithm (FWA) is a novel swarm intelligence-based method recently proposed for the optimization of multi-parameter, nonlinear functions. Numerical waveform inversion experiments using a synthetic model show that the FWA performs well in both solution quality and efficiency. We apply the FWA in this study to crustal velocity structure inversion using regional seismic waveform data of central Gansu on the northeastern margin of the Qinghai-Tibet plateau. Seismograms recorded from the moment magnitude ( M W) 5.4 Minxian earthquake enable obtaining an average crustal velocity model for this region. We initially carried out a series of FWA robustness tests in regional waveform inversion at the same earthquake and station positions across the study region, inverting two velocity structure models, with and without a low-velocity crustal layer; the accuracy of our average inversion results and their standard deviations reveal the advantages of the FWA for the inversion of regional seismic waveforms. We applied the FWA across our study area using three component waveform data recorded by nine broadband permanent seismic stations with epicentral distances ranging between 146 and 437 km. These inversion results show that the average thickness of the crust in this region is 46.75 km, while thicknesses of the sedimentary layer, and the upper, middle, and lower crust are 3.15, 15.69, 13.08, and 14.83 km, respectively. Results also show that the P-wave velocities of these layers and the upper mantle are 4.47, 6.07, 6.12, 6.87, and 8.18 km/s, respectively.

  16. Rock Slope Monitoring from 4D Time-Lapse Structure from Motion Analysis

    Science.gov (United States)

    Kromer, Ryan; Abellan, Antonio; Chyz, Alex; Hutchinson, Jean

    2017-04-01

    Structure from Motion (SfM) photogrammetry has become an important tool for studying earth surface processes because of its flexibility, ease of use, low cost and its capability of producing high quality 3-D surface models. A major benefit of SfM is that model accuracy is fit for purpose and surveys can be designed to meet a large range of spatial and temporal scales. In the Earth sciences, research in time-lapse SfM photogrammetry or videogrammetry is an area that is difficult to undertake due to complexities in acquiring, processing and managing large 4D datasets and represents an area with significant advancement potential (Eltner et al. 2016). In this study, we investigate the potential of 4D time-lapse SfM to monitor unstable rock slopes. We tested an array of statically mounted cameras collecting time-lapse photos of a limestone rock slope located along a highway in Canada. Our setup consisted of 8 DSLR cameras with 50 mm prime lenses spaced 2-3 m apart at a distance of 10 m from the slope. The portion of the rock slope monitored was 20 m wide and 6 m high. We collected data in four phases, each having 50 photographs taken simultaneously by each camera. The first phase of photographs was taken of the stable slope. In each successive phase, we gradually moved small, discrete blocks within the rock slope by 5-15 mm, simulating pre-failure deformation of rockfall. During the last phase we also removed discrete rock blocks, simulating rockfall. We used Agisoft Photoscan's 4D processing functionality and timeline tools to create 3D point clouds from the time-lapse photographs. These tools have the benefit of attaining better accuracy photo alignments as a greater number of photos are used. For change detection, we used the 4D filtering and calibration technique proposed by Kromer et al. (2015), which takes advantage of high degrees of spatial and temporal point redundancy to decrease measurement uncertainty. Preliminary results show that it is possible to attain

  17. Time-Lapse Electrical Geophysical Monitoring of Amendment-Based Biostimulation.

    Science.gov (United States)

    Johnson, Timothy C; Versteeg, Roelof J; Day-Lewis, Frederick D; Major, William; Lane, John W

    2015-01-01

    Biostimulation is increasingly used to accelerate microbial remediation of recalcitrant groundwater contaminants. Effective application of biostimulation requires successful emplacement of amendment in the contaminant target zone. Verification of remediation performance requires postemplacement assessment and contaminant monitoring. Sampling-based approaches are expensive and provide low-density spatial and temporal information. Time-lapse electrical resistivity tomography (ERT) is an effective geophysical method for determining temporal changes in subsurface electrical conductivity. Because remedial amendments and biostimulation-related biogeochemical processes often change subsurface electrical conductivity, ERT can complement and enhance sampling-based approaches for assessing emplacement and monitoring biostimulation-based remediation. Field studies demonstrating the ability of time-lapse ERT to monitor amendment emplacement and behavior were performed during a biostimulation remediation effort conducted at the Department of Defense Reutilization and Marketing Office (DRMO) Yard, in Brandywine, Maryland, United States. Geochemical fluid sampling was used to calibrate a petrophysical relation in order to predict groundwater indicators of amendment distribution. The petrophysical relations were field validated by comparing predictions to sequestered fluid sample results, thus demonstrating the potential of electrical geophysics for quantitative assessment of amendment-related geochemical properties. Crosshole radar zero-offset profile and borehole geophysical logging were also performed to augment the data set and validate interpretation. In addition to delineating amendment transport in the first 10 months after emplacement, the time-lapse ERT results show later changes in bulk electrical properties interpreted as mineral precipitation. Results support the use of more cost-effective surface-based ERT in conjunction with limited field sampling to improve spatial

  18. A state-space Bayesian framework for estimating biogeochemical transformations using time-lapse geophysical data

    Energy Technology Data Exchange (ETDEWEB)

    Chen, J.; Hubbard, S.; Williams, K.; Pride, S.; Li, L.; Steefel, C.; Slater, L.

    2009-04-15

    We develop a state-space Bayesian framework to combine time-lapse geophysical data with other types of information for quantitative estimation of biogeochemical parameters during bioremediation. We consider characteristics of end-products of biogeochemical transformations as state vectors, which evolve under constraints of local environments through evolution equations, and consider time-lapse geophysical data as available observations, which could be linked to the state vectors through petrophysical models. We estimate the state vectors and their associated unknown parameters over time using Markov chain Monte Carlo sampling methods. To demonstrate the use of the state-space approach, we apply it to complex resistivity data collected during laboratory column biostimulation experiments that were poised to precipitate iron and zinc sulfides during sulfate reduction. We develop a petrophysical model based on sphere-shaped cells to link the sulfide precipitate properties to the time-lapse geophysical attributes and estimate volume fraction of the sulfide precipitates, fraction of the dispersed, sulfide-encrusted cells, mean radius of the aggregated clusters, and permeability over the course of the experiments. Results of the case study suggest that the developed state-space approach permits the use of geophysical datasets for providing quantitative estimates of end-product characteristics and hydrological feedbacks associated with biogeochemical transformations. Although tested here on laboratory column experiment datasets, the developed framework provides the foundation needed for quantitative field-scale estimation of biogeochemical parameters over space and time using direct, but often sparse wellbore data with indirect, but more spatially extensive geophysical datasets.

  19. Time-lapse electrical geophysical monitoring of amendment-based biostimulation

    Science.gov (United States)

    Johnson, Timothy C.; Versteeg, Roelof J.; Day-Lewis, Frederick D.; Major, William; Lane, John W.

    2015-01-01

    Biostimulation is increasingly used to accelerate microbial remediation of recalcitrant groundwater contaminants. Effective application of biostimulation requires successful emplacement of amendment in the contaminant target zone. Verification of remediation performance requires postemplacement assessment and contaminant monitoring. Sampling-based approaches are expensive and provide low-density spatial and temporal information. Time-lapse electrical resistivity tomography (ERT) is an effective geophysical method for determining temporal changes in subsurface electrical conductivity. Because remedial amendments and biostimulation-related biogeochemical processes often change subsurface electrical conductivity, ERT can complement and enhance sampling-based approaches for assessing emplacement and monitoring biostimulation-based remediation.Field studies demonstrating the ability of time-lapse ERT to monitor amendment emplacement and behavior were performed during a biostimulation remediation effort conducted at the Department of Defense Reutilization and Marketing Office (DRMO) Yard, in Brandywine, Maryland, United States. Geochemical fluid sampling was used to calibrate a petrophysical relation in order to predict groundwater indicators of amendment distribution. The petrophysical relations were field validated by comparing predictions to sequestered fluid sample results, thus demonstrating the potential of electrical geophysics for quantitative assessment of amendment-related geochemical properties. Crosshole radar zero-offset profile and borehole geophysical logging were also performed to augment the data set and validate interpretation.In addition to delineating amendment transport in the first 10 months after emplacement, the time-lapse ERT results show later changes in bulk electrical properties interpreted as mineral precipitation. Results support the use of more cost-effective surface-based ERT in conjunction with limited field sampling to improve spatial

  20. Time-lapse 3D imaging of calcite precipitation in a microporous column

    Science.gov (United States)

    Godinho, Jose R. A.; Withers, Philip J.

    2018-02-01

    Time-lapse X-ray computed tomography is used to image the evolution of calcite precipitation during flow through microporous quartz over the course of 400 h. The growth rate decreases by more than seven times, which is linked to the clogging of flow paths that restricts flow to some regions of the column. Fewer precipitates are observed as a function of column depth, which is found to be related to a differential nucleation density along the sample. A higher nucleation density closer to the inlet implies more crystal volume increase per unit of time without affecting the rate if normalized to the surface area of crystals. Our overall growth rates measured in porous media are orders of magnitude slower than growth rates derived from traditional precipitation experiments on free surfaces. Based on our time-lapse results we hypothesize a scenario where the evolving distribution of precipitates within a pore structure during precipitation progressively modifies the local transport through the pores. Within less permeable regions the saturation index may be lower than along the main flow paths. Therefore, the reactive crystal surfaces within those regions grow at a slower rate than that expected from the bulk fluid composition. Since the amount of reactive surface area within these less permeable regions increases over time, the overall growth rate decreases without a necessary significant change of the bulk fluid composition along more permeable flow paths. In conclusion, the overall growth rates in an evolving porous media expected from bulk fluid compositions alone can be overestimated due to the development of stagnant sub-regions where the reactive surface area is bath by a solution with lower saturation index. In this context we highlight the value of time-lapse 3D studies for understanding the dynamics of mineral precipitation in porous media.

  1. Soil Contamination, Advanced integrated characterisation and time-lapse Monitoring, SoilCAM project highlights

    Science.gov (United States)

    French, H. K.; Van Der Zee, S. E.; Wehrer, M.; Godio, A.; Pedersen, L. B.; Tsocano, G.

    2013-12-01

    The SoilCAM project (2008- 2012, EU-FP7-212663) aimed at improving methods for monitoring subsurace contaminant distribution and biodegradation. Two test sites were chosen, Oslo airport Gardermoen, Norway where de-icing agents infiltrate the soil during snowmelt and the Trecate site in Italy where an inland crude oil spill occurred in 1994. A number of geophysical investigation techniques were combined with soil and water sampling techniques. Data obtained from time-lapse measurements were further analysed by numerical modelling of flow and transport at different scales in order to characterise transport processes in the unsaturated and saturated zones. Laboratory experiments provided physical and biogeochemical data for model parameterisation and to select remediation methods. The geophysical techniques were used to map geological heterogeneities and to conduct time-lapse measurements of processes in the unsaturated zone. Both cross borehole and surface electrodes were used for electrical resistivity and induced polarisation surveys. Results showed clear indications of areas highly affected by de-icing chemicals along the runway at Oslo airport. The time lapse measurements along the runway at the airport showed infiltration patterns during snowmelt and were used to validate 2D unsaturated flow and transport simulations using SUTRA. The simulations illustrate the effect of layering geological structures and membranes, buried parallel to the runway, on the flow pattern. Complex interaction between bio-geo-chemical processes in a 1D vertical profile along the runway were described with the ORCHESTRA model. Smaller scale field site measurements revealed increase of iron and manganese during degradation of de-icing chemicals. At the Trecate site a combination of georadar, electrical resistivity and radio magneto telluric provided a broad outline of the geology down to 50 m. Anomalies in the Induced polarisation and electrical resistivity data from the cross borehole

  2. Imaging the developing heart: synchronized time-lapse microscopy during developmental changes

    Science.gov (United States)

    Nelson, Carl J.; Buckley, Charlotte; Mullins, John J.; Denvir, Martin A.; Taylor, Jonathan

    2018-02-01

    How do you use imaging to analyse the development of the heart, which not only changes shape but also undergoes constant, high-speed, quasi-periodic changes? We have integrated ideas from prospective and retrospective optical gating to capture long-term, phase-locked developmental time-lapse videos. In this paper we demonstrate the success of this approach over a key developmental time period: heart looping, where large changes in heart shape prevent previous prospective gating approaches from capturing phase- locked videos. We use the comparison with other approaches to in vivo heart imaging to highlight the importance of collecting the most appropriate data for the biological question.

  3. 3-D time-lapse electrical resistivity monitoring of injected CO2 in a shallow aquifer

    DEFF Research Database (Denmark)

    Doetsch, Joseph A. J.A.; Auken, Esben; Christiansen, Anders Vest C A.V.C.

    2013-01-01

    and 10 m and monitored its migration using 320 surface electrodes on a 126 m × 20 m grid. A fully automated acquisition system continuously collected data and uploaded it into an online database. The large amount of data allows for time-series analysis for data quality and noise estimation. A baseline...... inversion reveals the geology at the site consisting of aeolian sands near the surface and glacial sands below 5 m depth. Time-lapse inversions clearly image the dissolved CO2 plume with decreased electrical resistivity values. We can follow the CO2 plume as it spreads and moves with the groundwater...

  4. Segmentation Method of Time-Lapse Microscopy Images with the Focus on Biocompatibility Assessment

    Czech Academy of Sciences Publication Activity Database

    Soukup, Jindřich; Císař, P.; Šroubek, Filip

    2016-01-01

    Roč. 22, č. 3 (2016), s. 497-506 ISSN 1431-9276 R&D Projects: GA ČR GA13-29225S Grant - others:GA MŠk(CZ) LO1205; GA UK(CZ) 914813/2013; GA UK(CZ) SVV-2016-260332; CENAKVA(CZ) CZ.1.05/2.1.00/01.0024 Institutional support: RVO:67985556 Keywords : phase contrast microscopy * segmentation * biocompatibility assessment * time-lapse * cytotoxicity testing Subject RIV: JD - Computer Applications, Robotics Impact factor: 1.891, year: 2016 http://library.utia.cas.cz/separaty/2016/ZOI/soukupj-0460642.pdf

  5. Time-lapse reveals that osteoclasts can move across the bone surface while resorbing

    DEFF Research Database (Denmark)

    Søe, Kent; Delaissé, Jean-Marie

    2017-01-01

    , clear real-time observations are still lacking. Herein, we used specific markers and time-lapse to monitor live the spatiotemporal generation of resorption events by osteoclasts cultured on bone slices. In accordance with the current view, we found alternating episodes of resorption and migration...... trenches. Compared to pit events, trench events show properties enabling higher aggressiveness: long duration (days), high erosion speed (two times faster) and long-distance erosion (several 100 µm). Simultaneous resorption and migration reflect a unique situation where epithelial/secretory and mesenchymal....../migratory characteristics are integrated into just one cell phenotype, and deserves attention in future research....

  6. Seismic site-response characterization of high-velocity sites using advanced geophysical techniques: application to the NAGRA-Net

    Science.gov (United States)

    Poggi, V.; Burjanek, J.; Michel, C.; Fäh, D.

    2017-08-01

    The Swiss Seismological Service (SED) has recently finalised the installation of ten new seismological broadband stations in northern Switzerland. The project was led in cooperation with the National Cooperative for the Disposal of Radioactive Waste (Nagra) and Swissnuclear to monitor micro seismicity at potential locations of nuclear-waste repositories. To further improve the quality and usability of the seismic recordings, an extensive characterization of the sites surrounding the installation area was performed following a standardised investigation protocol. State-of-the-art geophysical techniques have been used, including advanced active and passive seismic methods. The results of all analyses converged to the definition of a set of best-representative 1-D velocity profiles for each site, which are the input for the computation of engineering soil proxies (traveltime averaged velocity and quarter-wavelength parameters) and numerical amplification models. Computed site response is then validated through comparison with empirical site amplification, which is currently available for any station connected to the Swiss seismic networks. With the goal of a high-sensitivity network, most of the NAGRA stations have been installed on stiff-soil sites of rather high seismic velocity. Seismic characterization of such sites has always been considered challenging, due to lack of relevant velocity contrast and the large wavelengths required to investigate the frequency range of engineering interest. We describe how ambient vibration techniques can successfully be applied in these particular conditions, providing practical recommendations for best practice in seismic site characterization of high-velocity sites.

  7. Compositional trends among Kaapvaal Craton garnet peridotite xenoliths and their effects on seismic velocity and density

    DEFF Research Database (Denmark)

    Schutt, Derek; Lesher, Charles

    2010-01-01

    garnet and clinopyroxene enrichment. Using the parameterization of Schutt and Lesher (2006) we show that at cratonic mantle temperatures and pressures, orthopyroxene enrichment results in little change in bulk density (ρbulk) and shear-wave velocity (VS), but decreases compressional wave velocities (VP......We examine the modes and compositions of garnet-bearing peridotite xenoliths from the Kaapvaal Craton to quantify factors governing density and seismic velocity variations within metasomatically altered cratonic mantle. Three distinct compositional trends are resolved by principal component...... analysis. The first reflects differences in residue composition resulting from partial melting. The second is associated with orthopyroxene (opx) enrichment, possibly due to silica addition by subduction zone fluids in the source region of the xenoliths. The third principal component reflects garnet...

  8. Transformation of seismic velocity data to extract porosity and saturation values for rocks

    International Nuclear Information System (INIS)

    Berryman, James G.; Berge, Patricia A.; Bonner, Brian P.

    2000-01-01

    For wave propagation at low frequencies in a porous medium, the Gassmann-Domenico relations are well-established for homogeneous partial saturation by a liquid. They provide the correct relations for seismic velocities in terms of constituent bulk and shear moduli, solid and fluid densities, porosity and saturation. It has not been possible, however, to invert these relations easily to determine porosity and saturation when the seismic velocities are known. Also, the state (or distribution) of saturation, i.e., whether or not liquid and gas are homogeneously mixed in the pore space, is another important variable for reservoir evaluation. A reliable ability to determine the state of saturation from velocity data continues to be problematic. It is shown how transforming compressional and shear wave velocity data to the (ρ/λ,μ/λ)-plane (where λ and μ are the Lame parameters and ρ is the total density) results in a set of quasi-orthogonal coordinates for porosity and liquid saturation that greatly aids in the interpretation of seismic data for the physical parameters of most interest. A second transformation of the same data then permits isolation of the liquid saturation value, and also provides some direct information about the state of saturation. By thus replotting the data in the (λ/μ, ρ/μ)-plane, inferences can be made concerning the degree of patchy (inhomogeneous) versus homogeneous saturation that is present in the region of the medium sampled by the data. Our examples include igneous and sedimentary rocks, as well as man-made porous materials. These results have potential applications in various areas of interest, including petroleum exploration and reservoir characterization, geothermal resource evaluation, environmental restoration monitoring, and geotechnical site characterization. (c) 2000 Acoustical Society of America

  9. Shear-wave velocity-based probabilistic and deterministic assessment of seismic soil liquefaction potential

    Science.gov (United States)

    Kayen, R.; Moss, R.E.S.; Thompson, E.M.; Seed, R.B.; Cetin, K.O.; Der Kiureghian, A.; Tanaka, Y.; Tokimatsu, K.

    2013-01-01

    Shear-wave velocity (Vs) offers a means to determine the seismic resistance of soil to liquefaction by a fundamental soil property. This paper presents the results of an 11-year international project to gather new Vs site data and develop probabilistic correlations for seismic soil liquefaction occurrence. Toward that objective, shear-wave velocity test sites were identified, and measurements made for 301 new liquefaction field case histories in China, Japan, Taiwan, Greece, and the United States over a decade. The majority of these new case histories reoccupy those previously investigated by penetration testing. These new data are combined with previously published case histories to build a global catalog of 422 case histories of Vs liquefaction performance. Bayesian regression and structural reliability methods facilitate a probabilistic treatment of the Vs catalog for performance-based engineering applications. Where possible, uncertainties of the variables comprising both the seismic demand and the soil capacity were estimated and included in the analysis, resulting in greatly reduced overall model uncertainty relative to previous studies. The presented data set and probabilistic analysis also help resolve the ancillary issues of adjustment for soil fines content and magnitude scaling factors.

  10. Temporal Variability in Seismic Velocity at the Salton Sea Geothermal Field

    Science.gov (United States)

    Taira, T.; Nayak, A.; Brenguier, F.

    2015-12-01

    We characterize the temporal variability of ambient noise wavefield and search for velocity changes associated with activities of the geothermal energy development at the Salton Sea Geothermal Field. The noise cross-correlations (NCFs) are computed for ~6 years of continuous three-component seismic data (December 2007 through January 2014) collected at 8 sites from the CalEnergy Subnetwork (EN network) with MSNoise software (Lecocq et al., 2014, SRL). All seismic data are downloaded from the Southern California Earthquake Data Center. Velocity changes (dv/v) are obtained by measuring time delay between 5-day stacks of NCFs and the reference NCF (average over the entire 6 year period). The time history of dv/v is determined by averaging dv/v measurements over all station/channel pairs (252 combinations). Our preliminary dv/v measurement suggests a gradual increase in dv/v over the 6-year period in a frequency range of 0.5-8.0 Hz. The resultant increase rate of velocity is about 0.01%/year. We also explore the frequency-dependent velocity change at the 5 different frequency bands (0.5-2.0 Hz, 0.75-3.0 Hz, 1.0-4.0 Hz, 1.5-6.0 Hz, and 2.0-8.0 Hz) and find that the level of this long-term dv/v variability is increased with increase of frequency (i.e., the highest increase rate of ~0.15%/year at the 0.5-2.0 Hz band). This result suggests that the velocity changes were mostly occurred in a depth of ~500 m assuming that the coda parts of NCFs (~10-40 s depending on station distances) are predominantly composed of scattered surface waves, with the SoCal velocity model (Dreger and Helmberger, 1993, JGR). No clear seasonal variation of dv/v is observed in the frequency band of 0.5-8.0 Hz.

  11. Time lapse imaging: is it time to incorporate this technology into routine clinical practice?

    Science.gov (United States)

    Bhide, Priya; Maheshwari, Abha; Cutting, Rachel; Seenan, Susan; Patel, Anita; Khan, Khalid; Homburg, Roy

    2017-06-01

    Time-lapse imaging (TLI) systems for embryo incubation, assessment and selection are a novel technology available to in vitro fertilization (IVF) clinics. However, there is uncertainty about their clinical and cost-effectiveness and insufficient good quality evidence to warrant their routine use. Despite this, enthusiastic commercial marketing and slipping clinical equipoise have led to the widespread hasty introduction of this technology into practice, often at a considerable expense to the patient. We have reviewed the published literature and aim to summarize the strengths, weaknesses, opportunities and threats of these systems. These specialized incubators provide undisturbed embryo culture conditions and, by almost continuous monitoring of embryo development, generate morphokinetic parameters to aid embryo selection. They are thus hypothesized to improve outcomes following IVF. Although literature reports improved reproductive outcomes, these outcomes are largely surrogate and there is a paucity of studies reporting live births. The use of time lapse systems may reduce early pregnancy loss, increase elective single embryo transfers and limit multiple pregnancies through better embryo selection. However, the quality of the studies and hence the evidence so far, is low to moderate quality. We recommend further research producing robust high-quality evidence for and against the use of these systems.

  12. Time-lapse nanoscopy of friction in the non-Amontons and non-Coulomb regime.

    Science.gov (United States)

    Ishida, Tadashi; Sato, Takaaki; Ishikawa, Takahiro; Oguma, Masatsugu; Itamura, Noriaki; Goda, Keisuke; Sasaki, Naruo; Fujita, Hiroyuki

    2015-03-11

    Originally discovered by Leonard da Vinci in the 15th century, the force of friction is directly proportional to the applied load (known as Amontons' first law of friction). Furthermore, kinetic friction is independent of the sliding speed (known as Coulomb's law of friction). These empirical laws break down at high normal pressure (due to plastic deformation) and low sliding speed (in the transition regime between static friction and kinetic friction). An important example of this phenomenon is friction between the asperities of tectonic plates on the Earth. Despite its significance, little is known about the detailed mechanism of friction in this regime due to the lack of experimental methods. Here we demonstrate in situ time-lapse nanoscopy of friction between asperities sliding at ultralow speed (∼0.01 nm/s) under high normal pressure (∼GPa). This is made possible by compressing and rubbing a pair of nanometer-scale crystalline silicon anvils with electrostatic microactuators and monitoring its dynamical evolution with a transmission electron microscope. Our analysis of the time-lapse movie indicates that superplastic behavior is induced by decrystallization, plastic deformation, and atomic diffusion at the asperity-asperity interface. The results hold great promise for a better understanding of quasi-static friction under high pressure for geoscience, materials science, and nanotechnology.

  13. Time-Lapse Electrical Resistivity Investigations for Imaging the Grouting Injection in Shallow Subsurface Cavities

    Directory of Open Access Journals (Sweden)

    Muhammad Farooq

    2014-01-01

    Full Text Available The highway of Yongweol-ri, Muan-gun, south-western part of the South Korean Peninsula, is underlain by the abandoned of subsurface cavities, which were discovered in 2005. These cavities lie at shallow depths with the range of 5∼15 meters below the ground surface. Numerous subsidence events have repeatedly occurred in the past few years, damaging infrastructure and highway. As a result of continuing subsidence issues, the Korean Institute of Geosciences and Mineral Resources (KIGAM was requested by local administration to resolve the issue. The KIGAM used geophysical methods to delineate subsurface cavities and improve more refined understanding of the cavities network in the study area. Cement based grouting has been widely employed in the construction industry to reinforce subsurface ground. In this research work, time-lapse electrical resistivity surveys were accomplished to monitor the grouting injection in the subsurface cavities beneath the highway, which have provided a quasi-real-time monitoring for modifying the subsurface cavities related to ground reinforcement, which would be difficult with direct methods. The results obtained from time-lapse electrical resistivity technique have satisfactory imaged the grouting injection experiment in the subsurface cavities beneath the highway. Furthermore, the borehole camera confirmed the presence of grouting material in the subsurface cavities, and hence this procedure increases the mechanical resistance of subsurface cavities below the highway.

  14. Using a time lapse microgravity model for mapping seawater intrusion around Semarang

    Energy Technology Data Exchange (ETDEWEB)

    Supriyadi,, E-mail: supriyadi@mail.unnes.ac.id; Khumaedi [Physics Department, Semarang State University (UNNES), D7 Building 2nd Floor FMIPA Sekaran Gunungpati (Indonesia); Yusuf, M. [Badan Meteologi Klimatologi Goefisika (BMKG), Jl.Angkasa I No.2 Kemayoran Jakarta Pusat (Indonesia); Agung, W. [Physics Department, Diponegoro University (UNDIP), Jl. Prof. Soedharto, Tembalang, Semarang (Indonesia)

    2016-03-11

    A modeling of time-lapse microgravity anomaly due to sea water intrusion has been conducted. It used field data of aquifer cross section, aquifer thickness and lithology of research area. Those data were then processed using Grav3D and Surfer. Modeling results indicated that the intrusion of sea water resulting in a time-lapse microgravity anomalies of 0.12 to 0.18 mGal, at soil layer density of 0.15 g/cm{sup 3} to 0.3 g/cm{sup 3} and at depth of 30 to 100 m. These imply that the areas experiencing seawater intrusion were Tanjung Mas, SPBE Bandarharjo, Brass, Old Market Boom and Johar as the microgravity measured there were in the range of 0.12 to 0.18 mGal and the density contrast were at 0.15 g/cm{sup 3} to 0.28 g/cm{sup 3}. Areas that experienced fluid reduction were Puri Anjasmoro, Kenconowungu and Puspowarno with microgravity changes from -0.06 mGal to -0.18 mGal.

  15. Stochastic modeling of oligodendrocyte generation in cell culture: model validation with time-lapse data

    Directory of Open Access Journals (Sweden)

    Noble Mark

    2006-05-01

    Full Text Available Abstract Background The purpose of this paper is two-fold. The first objective is to validate the assumptions behind a stochastic model developed earlier by these authors to describe oligodendrocyte generation in cell culture. The second is to generate time-lapse data that may help biomathematicians to build stochastic models of cell proliferation and differentiation under other experimental scenarios. Results Using time-lapse video recording it is possible to follow the individual evolutions of different cells within each clone. This experimental technique is very laborious and cannot replace model-based quantitative inference from clonal data. However, it is unrivalled in validating the structure of a stochastic model intended to describe cell proliferation and differentiation at the clonal level. In this paper, such data are reported and analyzed for oligodendrocyte precursor cells cultured in vitro. Conclusion The results strongly support the validity of the most basic assumptions underpinning the previously proposed model of oligodendrocyte development in cell culture. However, there are some discrepancies; the most important is that the contribution of progenitor cell death to cell kinetics in this experimental system has been underestimated.

  16. Time-lapse crystallography snapshots of a double-strand break repair polymerase in action.

    Science.gov (United States)

    Jamsen, Joonas A; Beard, William A; Pedersen, Lars C; Shock, David D; Moon, Andrea F; Krahn, Juno M; Bebenek, Katarzyna; Kunkel, Thomas A; Wilson, Samuel H

    2017-08-15

    DNA polymerase (pol) μ is a DNA-dependent polymerase that incorporates nucleotides during gap-filling synthesis in the non-homologous end-joining pathway of double-strand break repair. Here we report time-lapse X-ray crystallography snapshots of catalytic events during gap-filling DNA synthesis by pol μ. Unique catalytic intermediates and active site conformational changes that underlie catalysis are uncovered, and a transient third (product) metal ion is observed in the product state. The product manganese coordinates phosphate oxygens of the inserted nucleotide and PP i . The product metal is not observed during DNA synthesis in the presence of magnesium. Kinetic analyses indicate that manganese increases the rate constant for deoxynucleoside 5'-triphosphate insertion compared to magnesium. The likely product stabilization role of the manganese product metal in pol μ is discussed. These observations provide insight on structural attributes of this X-family double-strand break repair polymerase that impact its biological function in genome maintenance.DNA polymerase (pol) μ functions in DNA double-strand break repair. Here the authors use time-lapse X-ray crystallography to capture the states of pol µ during the conversion from pre-catalytic to product complex and observe a third transiently bound metal ion in the product state.

  17. Analysis of compaction initiation in human embryos by using time-lapse cinematography.

    Science.gov (United States)

    Iwata, Kyoko; Yumoto, Keitaro; Sugishima, Minako; Mizoguchi, Chizuru; Kai, Yoshiteru; Iba, Yumiko; Mio, Yasuyuki

    2014-04-01

    To analyze the initiation of compaction in human embryos in vitro by using time-lapse cinematography (TLC), with the goal of determining the precise timing of compaction and clarifying the morphological changes underlying the compaction process. One hundred and fifteen embryos donated by couples with no further need for embryo-transfer were used in this study. Donated embryos were thawed and processed, and then their morphological behavior during the initiation of compaction was dynamically observed via time-lapse cinematography (TLC) for 5 days. Although the initiation of compaction occurred throughout the period from the 4-cell to 16-cell stage, 99 (86.1 %) embryos initiated compaction at the 8-cell stage or later, with initiation at the 8-cell stage being most frequent (22.6 %). Of these 99 embryos, 49.5 % developed into good-quality blastocysts. In contrast, of the 16 (13.9 %) embryos that initiated compaction prior to the 8-cell stage, only 18.8 % developed into good-quality blastocysts. Embryos that initiated compaction before the 8-cell stage showed significantly higher numbers of multinucleated blastomeres, due to asynchronism in nuclear division at the third mitotic division resulting from cytokinetic failure. The initiation of compaction primarily occurs at the third mitotic division or later in human embryos. Embryos that initiate compaction before the 8-cell stage are usually associated with aberrant embryonic development (i.e., cytokinetic failure accompanied by karyokinesis).

  18. Possible mechanism of polyspermy block in human oocytes observed by time-lapse cinematography.

    Science.gov (United States)

    Mio, Yasuyuki; Iwata, Kyoko; Yumoto, Keitaro; Kai, Yoshiteru; Sargant, Haruka C; Mizoguchi, Chizuru; Ueda, Minako; Tsuchie, Yuka; Imajo, Akifumi; Iba, Yumiko; Nishikori, Kyoko

    2012-09-01

    To analyze the fertilization process related to polyspermy block in human oocytes using an in vitro culturing system for time-lapse cinematography. We had 122 oocytes donated for this study from couples that provided informed consent. We recorded human oocytes at 2,000 to 2,800 frames every 10 s during the fertilization process and thereafter every 2 min using a new in vitro culture system originally developed by the authors for time-lapse cinematography. We displayed 30 frames per second for analysis of the polyspermy block during fertilization. Three oocytes showed the leading and following sperm within the zona pellucida in the same microscopic field. The dynamic images obtained during the fertilization process using this new system revealed that once a leading sperm penetrated the zona pellucida and attached to the oocyte membrane, a following sperm was arrested from further penetration into the zona pellucida within 10 s. The present results strongly suggest the existence of a novel mechanism of polyspermy block that takes place at the zona pellucida immediately after fertilization. These findings are clearly different from previous mechanisms describing polyspermy block as the oocyte membrane block to sperm penetration and the zona reaction. The finding presented herein thus represents a novel discovery about the highly complicated polyspermy block mechanism occurring in human oocytes.

  19. Time Lapse Electrical Resistivity to Connect Evapotranspiration and Groundwater Fluxes in the Critical Zone

    Science.gov (United States)

    Jarvis, S. K.; Harmon, R. E.; Barnard, H. R.; Randall, J.; Singha, K.

    2017-12-01

    The critical zone (CZ)—an open system extending from canopy top to the base of groundwater—is a highly dynamic and heterogeneous environment. In forested terrain, trees make up a large component of the CZ. This work aims to quantify the connection between vegetation and subsurface water storage at a hillslope scale within a forested watershed in the H.J. Andrews Experimental Forest, Oregon. To identify the mechanism(s) controlling the connection at the hillslope scale, we observe patterns in electrical conductivity using 2D-time lapse-DC resistivity. To compare inversions through time a representative error model was determined using L-curve criterion. Inverted data show high spatial variability in ground electrical conductivity and variation at both diel and seasonal timescales. These changes are most pronounced in areas corresponding to dense vegetation. The diel pattern in electrical conductivity is also observed in monitored sap flow sensors, water-level gauges, tensiometers, and sediment thermal probes. To quantify the temporal connection between these data over the course of the growing season a cross correlation analysis was conducted. Preliminary data show that over the course of the growing season transpiration becomes decoupled from both groundwater and soil moisture. Further decomposition of the inverted time lapse data will highlight spatial variability in electrical conductivity providing insight into the where, when, and how(s) of tree-modified subsurface storage.

  20. Three-dimensional seismic velocity structure and earthquake relocations at Katmai, Alaska

    Science.gov (United States)

    Murphy, Rachel; Thurber, Clifford; Prejean, Stephanie G.; Bennington, Ninfa

    2014-01-01

    We invert arrival time data from local earthquakes occurring between September 2004 and May 2009 to determine the three-dimensional (3D) upper crustal seismic structure in the Katmai volcanic region. Waveforms for the study come from the Alaska Volcano Observatory's permanent network of 20 seismic stations in the area (predominantly single-component, short period instruments) plus a densely spaced temporary array of 11 broadband, 3-component stations. The absolute and relative arrival times are used in a double-difference seismic tomography inversion to solve for 3D P- and S-wave velocity models for an area encompassing the main volcanic centers. The relocated hypocenters provide insight into the geometry of seismogenic structures in the area, revealing clustering of events into four distinct zones associated with Martin, Mageik, Trident-Novarupta, and Mount Katmai. The seismic activity extends from about sea level to 2 km depth (all depths referenced to mean sea level) beneath Martin, is concentrated near 2 km depth beneath Mageik, and lies mainly between 2 and 4 km depth below Katmai and Trident-Novarupta. Many new features are apparent within these earthquake clusters. In particular, linear features are visible within all clusters, some associated with swarm activity, including an observation of earthquake migration near Trident in 2008. The final velocity model reveals a possible zone of magma storage beneath Mageik, but there is no clear evidence for magma beneath the Katmai-Novarupta area where the 1912 eruptive activity occurred, suggesting that the storage zone for that eruption may have largely been evacuated, or remnant magma has solidified.

  1. Precise seismic-wave velocity atop Earth's core: No evidence for outer-core stratification

    Science.gov (United States)

    Alexandrakis, Catherine; Eaton, David W.

    2010-05-01

    Earth's outer core is composed of liquid Fe and Ni alloyed with a ˜10% fraction of light elements such as O, S, or Si. Secular cooling and compositional buoyancy drive vigorous convection that sustains the geodynamo, but critical details of light-element composition and thermal regime remain uncertain. Seismic velocities can provide important observational constraints on these parameters, but global reference models such as Preliminary Reference Earth Model ( PREM), IASP91 and AK135 exhibit significant discrepancies in the outermost ˜200 km of the core. Here, we apply an Empirical Transfer Function method to obtain precise arrival times for SmKS waves, a whispering-gallery mode that propagates near the underside of the core-mantle boundary. Models that fit our data are all characterized by seismic velocities and depth gradients in the outermost 200 km of the core that correspond best with PREM. This similarity to PREM, which has a smooth velocity profile that satisfies the adiabatic Adams and Williamson equation, argues against the presence of an anomalous layer of light material near the top of the core as suggested in some previous studies. A new model, AE09, is proposed as a slight modification to PREM for use as a reference model of the outermost core.

  2. Estimation of changes in saturation and pressure from 4D seismic AVO and time-shift analysis

    NARCIS (Netherlands)

    Trani, M.; Arts, R.; Leeuwenburgh, O.; Brouwer, J.

    2011-01-01

    A reliable estimate of reservoir pressure and fluid saturation changes from time-lapse seismic data is difficult to obtain. Existing methods generally suffer from leakage between the estimated parameters. We propose a new method using different combinations of time-lapse seismic attributes based on

  3. Development of a State-Wide 3-D Seismic Tomography Velocity Model for California

    Science.gov (United States)

    Thurber, C. H.; Lin, G.; Zhang, H.; Hauksson, E.; Shearer, P.; Waldhauser, F.; Hardebeck, J.; Brocher, T.

    2007-12-01

    We report on progress towards the development of a state-wide tomographic model of the P-wave velocity for the crust and uppermost mantle of California. The dataset combines first arrival times from earthquakes and quarry blasts recorded on regional network stations and travel times of first arrivals from explosions and airguns recorded on profile receivers and network stations. The principal active-source datasets are Geysers-San Pablo Bay, Imperial Valley, Livermore, W. Mojave, Gilroy-Coyote Lake, Shasta region, Great Valley, Morro Bay, Mono Craters-Long Valley, PACE, S. Sierras, LARSE 1 and 2, Loma Prieta, BASIX, San Francisco Peninsula and Parkfield. Our beta-version model is coarse (uniform 30 km horizontal and variable vertical gridding) but is able to image the principal features in previous separate regional models for northern and southern California, such as the high-velocity subducting Gorda Plate, upper to middle crustal velocity highs beneath the Sierra Nevada and much of the Coast Ranges, the deep low-velocity basins of the Great Valley, Ventura, and Los Angeles, and a high- velocity body in the lower crust underlying the Great Valley. The new state-wide model has improved areal coverage compared to the previous models, and extends to greater depth due to the data at large epicentral distances. We plan a series of steps to improve the model. We are enlarging and calibrating the active-source dataset as we obtain additional picks from investigators and perform quality control analyses on the existing and new picks. We will also be adding data from more quarry blasts, mainly in northern California, following an identification and calibration procedure similar to Lin et al. (2006). Composite event construction (Lin et al., in press) will be carried out for northern California for use in conventional tomography. A major contribution of the state-wide model is the identification of earthquakes yielding arrival times at both the Northern California Seismic

  4. Time-lapse Mise-á-la-Masse measurements and modeling for tracer test monitoring in a shallow aquifer

    Science.gov (United States)

    Perri, Maria Teresa; De Vita, Pantaleone; Masciale, Rita; Portoghese, Ivan; Chirico, Giovanni Battista; Cassiani, Giorgio

    2018-06-01

    The main goal of this study is to evaluate the reliability of the Mise-á-la-Masse (MALM) technique associated with saline tracer tests for the characterization of groundwater flow direction and velocity. The experimental site is located in the upper part of the Alento River alluvial plain (Campania Region, Southern Italy). In this paper we present the hydrogeological setting, the experimental setup and the relevant field results. Subsequently, we compare those data against the simulated results obtained with a 3D resistivity model of the test area, coupled with a model describing the Advection - Dispersion equation for continuous tracer injection. In particular, we calculate a series of 3D forward solutions starting from a reference model, all derived from electrical tomography results, but taking into consideration different values of mean flow velocity and directions. Each electrical resistivity 3D model is used to produce synthetic voltage maps for MALM surveys. Finally, the synthetic MALM voltage maps are compared with the ones measured in the field in order to assess the information content of the MALM dataset with respect to the groundwater field characteristics. The results demonstrate that the information content of the MALM data is sufficient to define important characteristics of the aquifer geometry and properties. This work shows how a combination of three-dimensional time-lapse modeling of flow, tracer transport and electrical current can substantially contribute towards a quantitative interpretation of MALM measurements during a saline tracer test. This approach can thus revive the use of MALM as a practical, low cost field technique for tracer test monitoring and aquifer hydrodynamic characterization.

  5. Comparison of Effective Medium Schemes For Seismic Velocities in Cracked Anisotropic Rock

    Science.gov (United States)

    Morshed, S.; Chesnokov, E.

    2017-12-01

    Understanding of elastic properties of reservoir rock is necessary for meaningful interpretation and analysis of seismic measurements. The elastic properties of a rock are controlled by the microstructural properties such as mineralogical composition, pore and crack distribution, texture and pore connectivity. However, seismic scale is much larger than microstructure scale. Understanding of macroscopic properties at relevant seismic scale (e.g. borehole sonic data) comes from effective medium theory (EMT). However, most of the effective medium theories fail at high crack density as the interactions of strain fields of the cracks can't be ignored. We compare major EMT schemes from low to high crack density. While at low crack density all method gives similar results, at high crack density they differ significantly. Then, we focus on generalized singular approximation (GSA) and effective field (EF) method as they allow cracks beyond the limit of dilute concentrations. Additionally, we use grain contact (GC) method to examine the stiffness constants of the rock matrix. We prepare simple models of a multiphase media containing low to high concentrations of isolated pores. Randomly oriented spherical pores and horizontally oriented ellipsoidal (aspect ratio =0.1) pores have been considered. For isolated spherical pores, all the three methods show exactly same or similar results. However, inclusion interactions are different in different directions in case of horizontal ellipsoidal pores and individual stiffness constants differ greatly from one method to another at different crack density. Stiffness constants remain consistent in GSA method whereas some components become unusual in EF method at a higher crack density (>0.15). Finally, we applied GSA method to interpret ultrasonic velocities of core samples. Mineralogical composition from X-ray diffraction (XRD) data and lab measured porosity data have been utilized. Both compressional and shear wave velocities from GSA

  6. Optimization of a Time-Lapse Gravity Network for Carbon Sequestration

    Science.gov (United States)

    Appriou, D.; Strickland, C. E.; Ruprecht Yonkofski, C. M.

    2017-12-01

    The objective of this study is to evaluate what could be a comprehensive and optimal state of the art gravity monitoring network that would meet the UIC class VI regulation and insure that 90% of the CO2 injected remain underground. Time-lapse gravity surveys have a long history of effective applications of monitoring temporal density changes in the subsurface. For decades, gravity measurements have been used for a wide range of applications. The interest of time-lapse gravity surveys for monitoring carbon sequestration sites started recently. The success of their deployment in such sites depends upon a combination of favorable conditions, such as the reservoir geometry, depth, thickness, density change over time induced by the CO2 injection and the location of the instrument. In most cases, the density changes induced by the CO2 plume in the subsurface are not detectable from the surface but the use of borehole gravimeters can provide excellent results. In the framework of the National Assessment and Risk Partnership (NRAP) funded by the Department of Energy, the evaluation of the effectiveness of the gravity monitoring of a CO2 storage site has been assessed using multiple synthetic scenarios implemented on a community model developed for the Kimberlina site (e.g., fault leakage scenarios, borehole leakage). The Kimberlina carbon sequestration project was a pilot project located in southern San Joaquin Valley, California, aimed to safely inject 250,000 t CO2/yr for four years. Although the project was cancelled in 2012, the site characterization efforts resulted in the development of a geologic model. In this study, we present the results of the time-lapse gravity monitoring applied on different multiphase flow and reactive transport models developed by Lawrence Berkeley National Laboratory (i.e., no leakage, permeable fault zone, wellbore leakage). Our monitoring approach considers an ideal network, consisting of multiple vertical and horizontal instrumented

  7. Crustal composition in the Hidaka Metamorphic Belt estimated from seismic velocity by laboratory measurements

    Science.gov (United States)

    Yamauchi, K.; Ishikawa, M.; Sato, H.; Iwasaki, T.; Toyoshima, T.

    2015-12-01

    To understand the dynamics of the lithosphere in subduction systems, the knowledge of rock composition is significant. However, rock composition of the overriding plate is still poorly understood. To estimate rock composition of the lithosphere, it is an effective method to compare the elastic wave velocities measured under the high pressure and temperature condition with the seismic velocities obtained by active source experiment and earthquake observation. Due to an arc-arc collision in central Hokkaido, middle to lower crust is exposed along the Hidaka Metamorphic Belt (HMB), providing exceptional opportunities to study crust composition of an island arc. Across the HMB, P-wave velocity model has been constructed by refraction/wide-angle reflection seismic profiling (Iwasaki et al., 2004). Furthermore, because of the interpretation of the crustal structure (Ito, 2000), we can follow a continuous pass from the surface to the middle-lower crust. We corrected representative rock samples from HMB and measured ultrasonic P-wave (Vp) and S-wave velocities (Vs) under the pressure up to 1.0 GPa in a temperature range from 25 to 400 °C. For example, the Vp values measured at 25 °C and 0.5 GPa are 5.88 km/s for the granite (74.29 wt.% SiO2), 6.02-6.34 km/s for the tonalites (66.31-68.92 wt.% SiO2), 6.34 km/s for the gneiss (64.69 wt.% SiO2), 6.41-7.05 km/s for the amphibolites (50.06-51.13 wt.% SiO2), and 7.42 km/s for the mafic granulite (50.94 wt.% SiO2). And, Vp of tonalites showed a correlation with SiO2 (wt.%). Comparing with the velocity profiles across the HMB (Iwasaki et al., 2004), we estimate that the lower to middle crust consists of amphibolite and tonalite, and the estimated acoustic impedance contrast between them suggests an existence of a clear reflective boundary, which accords well to the obtained seismic reflection profile (Iwasaki et al., 2014). And, we can obtain the same tendency from comparing measured Vp/Vs ratio and Vp/Vs ratio structure model

  8. The thin section rock physics: Modeling and measurement of seismic wave velocity on the slice of carbonates

    Energy Technology Data Exchange (ETDEWEB)

    Wardaya, P. D., E-mail: pongga.wardaya@utp.edu.my; Noh, K. A. B. M., E-mail: pongga.wardaya@utp.edu.my; Yusoff, W. I. B. W., E-mail: pongga.wardaya@utp.edu.my [Petroleum Geosciences Department, Universiti Teknologi PETRONAS, Tronoh, Perak, 31750 (Malaysia); Ridha, S. [Petroleum Engineering Department, Universiti Teknologi PETRONAS, Tronoh, Perak, 31750 (Malaysia); Nurhandoko, B. E. B. [Wave Inversion and Subsurface Fluid Imaging Research Laboratory (WISFIR), Dept. of Physics, Institute of Technology Bandung, Bandung, Indonesia and Rock Fluid Imaging Lab, Bandung (Indonesia)

    2014-09-25

    This paper discusses a new approach for investigating the seismic wave velocity of rock, specifically carbonates, as affected by their pore structures. While the conventional routine of seismic velocity measurement highly depends on the extensive laboratory experiment, the proposed approach utilizes the digital rock physics view which lies on the numerical experiment. Thus, instead of using core sample, we use the thin section image of carbonate rock to measure the effective seismic wave velocity when travelling on it. In the numerical experiment, thin section images act as the medium on which wave propagation will be simulated. For the modeling, an advanced technique based on artificial neural network was employed for building the velocity and density profile, replacing image's RGB pixel value with the seismic velocity and density of each rock constituent. Then, ultrasonic wave was simulated to propagate in the thin section image by using finite difference time domain method, based on assumption of an acoustic-isotropic medium. Effective velocities were drawn from the recorded signal and being compared to the velocity modeling from Wyllie time average model and Kuster-Toksoz rock physics model. To perform the modeling, image analysis routines were undertaken for quantifying the pore aspect ratio that is assumed to represent the rocks pore structure. In addition, porosity and mineral fraction required for velocity modeling were also quantified by using integrated neural network and image analysis technique. It was found that the Kuster-Toksoz gives the closer prediction to the measured velocity as compared to the Wyllie time average model. We also conclude that Wyllie time average that does not incorporate the pore structure parameter deviates significantly for samples having more than 40% porosity. Utilizing this approach we found a good agreement between numerical experiment and theoretically derived rock physics model for estimating the effective seismic

  9. The thin section rock physics: Modeling and measurement of seismic wave velocity on the slice of carbonates

    International Nuclear Information System (INIS)

    Wardaya, P. D.; Noh, K. A. B. M.; Yusoff, W. I. B. W.; Ridha, S.; Nurhandoko, B. E. B.

    2014-01-01

    This paper discusses a new approach for investigating the seismic wave velocity of rock, specifically carbonates, as affected by their pore structures. While the conventional routine of seismic velocity measurement highly depends on the extensive laboratory experiment, the proposed approach utilizes the digital rock physics view which lies on the numerical experiment. Thus, instead of using core sample, we use the thin section image of carbonate rock to measure the effective seismic wave velocity when travelling on it. In the numerical experiment, thin section images act as the medium on which wave propagation will be simulated. For the modeling, an advanced technique based on artificial neural network was employed for building the velocity and density profile, replacing image's RGB pixel value with the seismic velocity and density of each rock constituent. Then, ultrasonic wave was simulated to propagate in the thin section image by using finite difference time domain method, based on assumption of an acoustic-isotropic medium. Effective velocities were drawn from the recorded signal and being compared to the velocity modeling from Wyllie time average model and Kuster-Toksoz rock physics model. To perform the modeling, image analysis routines were undertaken for quantifying the pore aspect ratio that is assumed to represent the rocks pore structure. In addition, porosity and mineral fraction required for velocity modeling were also quantified by using integrated neural network and image analysis technique. It was found that the Kuster-Toksoz gives the closer prediction to the measured velocity as compared to the Wyllie time average model. We also conclude that Wyllie time average that does not incorporate the pore structure parameter deviates significantly for samples having more than 40% porosity. Utilizing this approach we found a good agreement between numerical experiment and theoretically derived rock physics model for estimating the effective seismic wave

  10. A California statewide three-dimensional seismic velocity model from both absolute and differential times

    Science.gov (United States)

    Lin, G.; Thurber, C.H.; Zhang, H.; Hauksson, E.; Shearer, P.M.; Waldhauser, F.; Brocher, T.M.; Hardebeck, J.

    2010-01-01

    We obtain a seismic velocity model of the California crust and uppermost mantle using a regional-scale double-difference tomography algorithm. We begin by using absolute arrival-time picks to solve for a coarse three-dimensional (3D) P velocity (VP) model with a uniform 30 km horizontal node spacing, which we then use as the starting model for a finer-scale inversion using double-difference tomography applied to absolute and differential pick times. For computational reasons, we split the state into 5 subregions with a grid spacing of 10 to 20 km and assemble our final statewide VP model by stitching together these local models. We also solve for a statewide S-wave model using S picks from both the Southern California Seismic Network and USArray, assuming a starting model based on the VP results and a VP=VS ratio of 1.732. Our new model has improved areal coverage compared with previous models, extending 570 km in the SW-NE directionand 1320 km in the NW-SE direction. It also extends to greater depth due to the inclusion of substantial data at large epicentral distances. Our VP model generally agrees with previous separate regional models for northern and southern California, but we also observe some new features, such as high-velocity anomalies at shallow depths in the Klamath Mountains and Mount Shasta area, somewhat slow velocities in the northern Coast Ranges, and slow anomalies beneath the Sierra Nevada at midcrustal and greater depths. This model can be applied to a variety of regional-scale studies in California, such as developing a unified statewide earthquake location catalog and performing regional waveform modeling.

  11. Calibrating vadose zone models with time-lapse gravity data: a forced infiltration experiment

    DEFF Research Database (Denmark)

    Christiansen, Lars; Hansen, Allan Bo; Zibar, Majken Caroline Looms

    A change in soil water content is a change in mass stored in the subsurface, and when large enough, can be measured with a gravity meter. Over the last few decades there has been increased use of ground-based time-lapse gravity measurements to infer hydrogeological parameters. These studies have...... focused on the saturated zone, with specific yield as the most prominent target parameter and with few exceptions, changes in storage in the vadose zone have been considered as noise. Here modeling results are presented suggesting that gravity changes will be measureable when soil moisture changes occur...... in the unsaturated zone. These results are confirmed by field measurements of gravity and georadar data at a forced infiltration experiment conducted over 14 days on a grassland area of 10 m by 10 m. An unsaturated zone infiltration model can be calibrated using the gravity data with good agreement to the field data...

  12. Slow speed—fast motion: time-lapse recordings in physics education

    Science.gov (United States)

    Vollmer, Michael; Möllmann, Klaus-Peter

    2018-05-01

    Video analysis with a 30 Hz frame rate is the standard tool in physics education. The development of affordable high-speed-cameras has extended the capabilities of the tool for much smaller time scales to the 1 ms range, using frame rates of typically up to 1000 frames s-1, allowing us to study transient physics phenomena happening too fast for the naked eye. Here we want to extend the range of phenomena which may be studied by video analysis in the opposite direction by focusing on much longer time scales ranging from minutes, hours to many days or even months. We discuss this time-lapse method, needed equipment and give a few hints of how to produce respective recordings for two specific experiments.

  13. Using time-lapse gravity for groundwater model calibration: An application to alluvial aquifer storage

    DEFF Research Database (Denmark)

    Christiansen, Lars; Binning, Philip John; Rosbjerg, Dan

    2011-01-01

    hydrogeophysical inversion to decrease parameter correlation in groundwater models. This is demonstrated for a model of riverbank infiltration where combined inversion successfully constrains hydraulic conductivity and specific yield in both an analytical and a numerical groundwater model. A sensitivity study...... shows that time-lapse gravity data are especially useful to constrain specific yield. Furthermore, we demonstrate that evapotranspiration, and riverbed conductance are better constrained by coupled inversion to gravity and head data than to head data alone. When estimating the four parameters...... simultaneously, the six correlation coefficients were reduced from unity when only head data were employed to significantly lower values when gravity and head data were combined. Our analysis reveals that the estimated parameter values are not very sensitive to the choice of weighting between head and gravity...

  14. A poly(dimethylsiloxane)-based device enabling time-lapse imaging with high spatial resolution

    International Nuclear Information System (INIS)

    Hirano, Masahiko; Hoshida, Tetsushi; Sakaue-Sawano, Asako; Miyawaki, Atsushi

    2010-01-01

    We have developed a regulator-free device that enables long-term incubation of mammalian cells for epi-fluorescence imaging, based on a concept that the size of sample to be gassed and heated is reduced to observation scale. A poly(dimethylsiloxane) block stamped on a coverslip works as a long-lasting supplier of CO 2 -rich gas to adjust bicarbonate-containing medium in a tiny chamber at physiological pH, and an oil-immersion objective warms cells across the coverslip. A time-lapse imaging experiment using HeLa cells stably expressing fluorescent cell-cycle indicators showed that the cells in the chamber proliferated with normal cell-cycle period over 2 days.

  15. Time-lapse cinematography in living Drosophila tissues: preparation of material.

    Science.gov (United States)

    Davis, Ilan; Parton, Richard M

    2006-11-01

    The fruit fly, Drosophila melanogaster, has been an extraordinarily successful model organism for studying the genetic basis of development and evolution. It is arguably the best-understood complex multicellular model system, owing its success to many factors. Recent developments in imaging techniques, in particular sophisticated fluorescence microscopy methods and equipment, now allow cellular events to be studied at high resolution in living material. This ability has enabled the study of features that tend to be lost or damaged by fixation, such as transient or dynamic events. Although many of the techniques of live cell imaging in Drosophila are shared with the greater community of cell biologists working on other model systems, studying living fly tissues presents unique difficulties in keeping the cells alive, introducing fluorescent probes, and imaging through thick hazy cytoplasm. This protocol outlines the preparation of major tissue types amenable to study by time-lapse cinematography and different methods for keeping them alive.

  16. Time-lapse cinematography of the capillary tube cell migration inhibition test.

    Science.gov (United States)

    Bray, M A

    1980-01-01

    The kinetics of human and guinea pig cell migration inhibition have been studied using time-lapse cinematography of cells migrating from capillary tubes. Guinea pig and human cells exhibit markedly different kinetics in the absence of inhibitors. Specific antigen causes a dose-related inhibition of migration for up to 60 h using guinea pig cells and a peak of inhibition after 18 h using the human leucocyte system. The timing of measurement of maximum activity more critical for the latter test. The kinetics of lymphokine generation have been examined and the migration inhibitory activity of the plant mitogen (PHA), a Kurloff cell product and a continuous cell line supernatant have been compared with the inhibitory profiles of lymphokine preparations and specific antigen.

  17. Time-lapse cinematography of dynamic changes occurring during in vitro development of human embryos.

    Science.gov (United States)

    Mio, Yasuyuki; Maeda, Kazuo

    2008-12-01

    The purpose of this study was to clarify developmental changes of early human embryos by using time-lapse cinematography (TLC). For human ova, fertilization and cleavage, development of the blastocyst, and hatching, as well as consequent changes were repeatedly photographed at intervals of 5-6 days by using an inverse microscope under stabilized temperature and pH. Photographs were taken at 30 frames per second and the movies were studied. Cinematography has increased our understanding of the morphologic mechanisms of fertilization, development, and behavior of early human embryos, and has identified the increased risk of monozygotic twin pregnancy based on prolonged incubation in vitro to the blastocyst stage. Using TLC, we observed the fertilization of an ovum by a single spermatozoon, followed by early cleavages, formation of the morula, blastocyst hatching, changes in the embryonic plates, and the development of monozygotic twins from the incubated blastocysts.

  18. Shear-wave velocity models and seismic sources in Campanian volcanic areas: Vesuvius and Phlegraean fields

    Energy Technology Data Exchange (ETDEWEB)

    Guidarelli, M; Zille, A; Sarao, A [Dipartimento di Scienze della Terra, Universita degli Studi di Trieste, Trieste (Italy); Natale, M; Nunziata, C [Dipartimento di Geofisica e Vulcanologia, Universita di Napoli ' Federico II' , Napoli (Italy); Panza, G F [Dipartimento di Scienze della Terra, Universita degli Studi di Trieste, Trieste (Italy); Abdus Salam International Centre for Theoretical Physics, Trieste (Italy)

    2006-12-15

    This chapter summarizes a comparative study of shear-wave velocity models and seismic sources in the Campanian volcanic areas of Vesuvius and Phlegraean Fields. These velocity models were obtained through the nonlinear inversion of surface-wave tomography data, using as a priori constraints the relevant information available in the literature. Local group velocity data were obtained by means of the frequency-time analysis for the time period between 0.3 and 2 s and were combined with the group velocity data for the time period between 10 and 35 s from the regional events located in the Italian peninsula and bordering areas and two station phase velocity data corresponding to the time period between 25 and 100 s. In order to invert Rayleigh wave dispersion curves, we applied the nonlinear inversion method called hedgehog and retrieved average models for the first 30-35 km of the lithosphere, with the lower part of the upper mantle being kept fixed on the basis of existing regional models. A feature that is common to the two volcanic areas is a low shear velocity layer which is centered at the depth of about 10 km, while on the outside of the cone and along a path in the northeastern part of the Vesuvius area this layer is absent. This low velocity can be associated with the presence of partial melting and, therefore, may represent a quite diffused crustal magma reservoir which is fed by a deeper one that is regional in character and located in the uppermost mantle. The study of seismic source in terms of the moment tensor is suitable for an investigation of physical processes within a volcano; indeed, its components, double couple, compensated linear vector dipole, and volumetric, can be related to the movements of magma and fluids within the volcanic system. Although for many recent earthquake events the percentage of double couple component is high, our results also show the presence of significant non-double couple components in both volcanic areas. (author)

  19. Evaluating time-lapse ERT for monitoring DNAPL remediation via numerical simulation

    Science.gov (United States)

    Power, C.; Karaoulis, M.; Gerhard, J.; Tsourlos, P.; Giannopoulos, A.

    2012-12-01

    Dense non-aqueous phase liquids (DNAPLs) remain a challenging geoenvironmental problem in the near subsurface. Numerous thermal, chemical, and biological treatment methods are being applied at sites but without a non-destructive, rapid technique to map the evolution of DNAPL mass in space and time, the degree of remedial success is difficult to quantify. Electrical resistivity tomography (ERT) has long been presented as highly promising in this context but has not yet become a practitioner's tool due to challenges in interpreting the survey results at real sites where the initial condition (DNAPL mass, DNAPL distribution, subsurface heterogeneity) is typically unknown. Recently, a new numerical model was presented that couples DNAPL and ERT simulation at the field scale, providing a tool for optimizing ERT application and interpretation at DNAPL sites (Power et al., 2011, Fall AGU, H31D-1191). The objective of this study is to employ this tool to evaluate the effectiveness of time-lapse ERT to monitor DNAPL source zone remediation, taking advantage of new inversion methodologies that exploit the differences in the target over time. Several three-dimensional releases of chlorinated solvent DNAPLs into heterogeneous clayey sand at the field scale were generated, varying in the depth and complexity of the source zone (target). Over time, dissolution of the DNAPL in groundwater was simulated with simultaneous mapping via periodic ERT surveys. Both surface and borehole ERT surveys were conducted for comparison purposes. The latest four-dimensional ERT inversion algorithms were employed to generate time-lapse isosurfaces of the DNAPL source zone for all cases. This methodology provided a qualitative assessment of the ability of ERT to track DNAPL mass removal for complex source zones in realistically heterogeneous environments. In addition, it provided a quantitative comparison between the actual DNAPL mass removed and that interpreted by ERT as a function of depth below

  20. Gliding motility of Babesia bovis merozoites visualized by time-lapse video microscopy.

    Directory of Open Access Journals (Sweden)

    Masahito Asada

    Full Text Available BACKGROUND: Babesia bovis is an apicomplexan intraerythrocytic protozoan parasite that induces babesiosis in cattle after transmission by ticks. During specific stages of the apicomplexan parasite lifecycle, such as the sporozoites of Plasmodium falciparum and tachyzoites of Toxoplasma gondii, host cells are targeted for invasion using a unique, active process termed "gliding motility". However, it is not thoroughly understood how the merozoites of B. bovis target and invade host red blood cells (RBCs, and gliding motility has so far not been observed in the parasite. METHODOLOGY/PRINCIPAL FINDINGS: Gliding motility of B. bovis merozoites was revealed by time-lapse video microscopy. The recorded images revealed that the process included egress of the merozoites from the infected RBC, gliding motility, and subsequent invasion into new RBCs. The gliding motility of B. bovis merozoites was similar to the helical gliding of Toxoplasma tachyzoites. The trails left by the merozoites were detected by indirect immunofluorescence assay using antiserum against B. bovis merozoite surface antigen 1. Inhibition of gliding motility by actin filament polymerization or depolymerization indicated that the gliding motility was driven by actomyosin dependent process. In addition, we revealed the timing of breakdown of the parasitophorous vacuole. Time-lapse image analysis of membrane-stained bovine RBCs showed formation and breakdown of the parasitophorous vacuole within ten minutes of invasion. CONCLUSIONS/SIGNIFICANCE: This is the first report of the gliding motility of B. bovis. Since merozoites of Plasmodium parasites do not glide on a substrate, the gliding motility of B. bovis merozoites is a notable finding.

  1. Velocity Model Analysis Based on Integrated Well and Seismic Data of East Java Basin

    Science.gov (United States)

    Mubin, Fathul; Widya, Aviandy; Eka Nurcahya, Budi; Nurul Mahmudah, Erma; Purwaman, Indro; Radityo, Aryo; Shirly, Agung; Nurwani, Citra

    2018-03-01

    Time to depth conversion is an important processof seismic interpretationtoidentify hydrocarbonprospectivity. Main objectives of this research are to minimize the risk of error in geometry and time to depth conversion. Since it’s using a large amount of data and had been doing in the large scale of research areas, this research can be classified as a regional scale research. The research was focused on three horizons time interpretation: Top Kujung I, Top Ngimbang and Basement which located in the offshore and onshore areas of east Java basin. These three horizons was selected because they were assumed to be equivalent to the rock formation, which is it has always been the main objective of oil and gas exploration in the East Java Basin. As additional value, there was no previous works on velocity modeling for regional scale using geological parameters in East Java basin. Lithology and interval thickness were identified as geological factors that effected the velocity distribution in East Java Basin. Therefore, a three layer geological model was generated, which was defined by the type of lithology; carbonate (layer 1: Top Kujung I), shale (layer 2: Top Ngimbang) and Basement. A statistical method using three horizons is able to predict the velocity distribution on sparse well data in a regional scale. The average velocity range for Top Kujung I is 400 m/s - 6000 m/s, Top Ngimbang is 500 m/s - 8200 m/s and Basement is 600 m/s - 8000 m/s. Some velocity anomalies found in Madura sub-basin area, caused by geological factor which identified as thick shale deposit and high density values on shale. Result of velocity and depth modeling analysis can be used to define the volume range deterministically and to make geological models to prospect generation in details by geological concept.

  2. Bayesian Markov chain Monte Carlo Inversion of Time-Lapse Geophysical Data To Characterize the Vadose Zone

    DEFF Research Database (Denmark)

    Scholer, Marie; Irving, James; Zibar, Majken Caroline Looms

    Geophysical methods have the potential to provide valuable information on hydrological properties in the unsaturated zone. In particular, time-lapse geophysical data, when coupled with a hydrological model and inverted stochastically, may allow for the effective estimation of subsurface hydraulic...... parameters and their corresponding uncertainties. In this study, we use a Bayesian Markov-chain-Monte-Carlo (MCMC) inversion approach to investigate how much information regarding vadose zone hydraulic properties can be retrieved from time-lapse crosshole GPR data collected at the Arrenaes field site...

  3. Elements of seismic imaging and velocity analysis – Forward modeling and diffraction analysis of conventional seismic data from the North Sea

    DEFF Research Database (Denmark)

    Montazeri, Mahboubeh

    2018-01-01

    comprises important oil and gas reservoirs. By application of well-established conventional velocity analysis methods and high-quality diffraction imaging techniques, this study aims to increase the resolution and the image quality of the seismic data. In order to analyze seismic wave propagation......-outs and salt delineations, which can be extracted from the diffractions. The potential of diffraction imaging techniques was studied for 2D seismic stacked data from the North Sea. In this approach, the applied plane-wave destruction method was successful in order to suppress the reflections from the stacked....... This improved seismic imaging is demonstrated for a salt structure as well as for Overpressured Shale structures and the Top Chalk of the North Sea....

  4. Seismic velocity structure of the crust in NW Namibia: Impact of rifting and mantle plume activity

    Science.gov (United States)

    Bauer, K.; Heit, B.; Muksin, U.; Yuan, X.

    2017-12-01

    The continental crust in northwestern Namibiamainly was formed during to the Neoproterozoic assembly of Gondwana. The collision of old African and South American cratonic coressuch as the Congo, Kalahari and Rio de la Plata cratons led tothe development of the Pan-African Damara orogen. The fold systemconsists of an intracratonic branch in northern central Namibia (named Damara Belt), and two coast-parallel branches, the Kaoko Belt in northern Namibia and the Gariep Belt in the border region between Namibia and theRepublic of South Africa. During the Early Cretaceous opening of the South Atlantic ocean, the crust in NW Namibia was prominently affected by the Tristan da Cunha mantle plume, as evidenced by the emplacement of the Etendeka continental flood basalts.A local earthquake tomography was carried out in NW Namibia to investigateif and to what degree the deeper continental crust was modified by the magmaticactivity during rifting and the impingement of the Tristan da Cunhamantle plume. We analyzed data from 28 onshore stations of the temporaryWALPASS seismic network. Stations were covering the continental marginaround the landfall of the Walvis Ridge, parts of the Kaoko Belt and Damara Belt,and marginally the southwestern edges of the Congo craton.First arrivals of P and S waves were identified and travel times werepicked manually. 1D inversion was carried out with VELEST to derivestarting models and the initial seismicity distribution, and SIMUL2000was used for the subsequent 3D tomographic inversion. The resultingseismicity distribution mainly follows the structures of the Pan-Africanorogenic belts. The majority of events was localized in the upper crust,but additional seismicity was also found in the deeper crust.An anomaly of increased P velocities is revealed in the deep crust under the Etendekaflood basalt province. Increased P velocities can be explained by mafic and ultra-maficmaterial which intruded in the lower crust. The anomaly appears to be rather

  5. The density, compressibility and seismic velocity of hydrous melts at crustal and upper mantle conditions

    Science.gov (United States)

    Ueki, K.; Iwamori, H.

    2015-12-01

    Various processes of subduction zone magmatism, such as upward migration of partial melts and fractional crystallization depend on the density of the hydrous silicate melt. The density and the compressibility of the hydrous melt are key factors for the thermodynamic calculation of phase relation of the hydrous melt, and the geophysical inversion to predict physicochemical conditions of the melting region based on the seismic velocity. This study presents a new model for the calculations of the density of the hydrous silicate melts as a function of T, P, H2O content and melt composition. The Birch-Murnaghan equation is used for the equation of state. We compile the experimentally determined densities of various hydrous melts, and optimize the partial molar volume, compressibility, thermal expansibility and its pressure derivative, and K' of the H2O component in the silicate melt. P-T ranges of the calibration database are 0.48-4.29 GPa and 1033-2073 K. As such, this model covers the P-T ranges of the entire melting region of the subduction zone. Parameter set provided by Lange and Carmichael [1990] is used for the partial molar volume and KT value of the anhydrous silicate melt. K' of anhydrous melt is newly parameterized as a function of SiO2 content. The new model accurately reproduces the experimentally determined density variations of various hydrous melts from basalt to rhyolite. Our result shows that the hydrous melt is more compressive and less dense than the anhydrous melt; with the 5 wt% of H2O in melt, density and KT decrease by ~10% and ~30% from those of the anhydrous melt, respectively. For the application of the model, we calculated the P-wave velocity of the hydrous melt. With the 5 wt% of H2O, P-wave velocity of the silicate melt decreases by >10%. Based on the melt P-wave velocity, we demonstrate the effect of the melt H2O content on the seismic velocity of the partially molten zone of the subduction zone.

  6. Seismic Wave Propagation from Underground Chemical Explosions: Sensitivity to Velocity and Thickness of a Weathered Layer

    Science.gov (United States)

    Hirakawa, E. T.; Ezzedine, S. M.

    2017-12-01

    Recorded motions from underground chemical explosions are complicated by long duration seismic coda as well as motion in the tangential direction. The inability to distinguish the origins of these complexities as either source or path effects comprises a limitation to effective monitoring of underground chemical explosions. With numerical models, it is possible to conduct rigorous sensitivity analyses for chemical explosive sources and their resulting ground motions under the influence of many attributes, including but not limited to complex velocity structure, topography, and non-linear source characteristics. Previously we found that topography can cause significant scattering in the direct wave but leads to relatively little motion in the coda. Here, we aim to investigate the contribution from the low-velocity weathered layer that exists in the shallow subsurface apart from and in combination with surface topography. We use SW4, an anelastic anisotropic fourth order finite difference code to simulate chemical explosive source in a 1D velocity structure consisting of a single weathered layer over a half space. A range of velocity magnitudes are used for the upper weathered layer with the velocities always being lower than that of the granitic underlaying layer. We find that for lower weathered layer velocities, the wave train is highly dispersed and causes a large percentage of energy to be contained in the coda in relation to the entire time series. The percentage of energy contained in the coda grows with distance from the source but saturates at a certain distance that depends on weathered layer velocity and thickness. The saturation onset distance increases with decreasing layer thickness and increasing velocity of the upper layer. Measurements of relative coda energy and coda saturation onset distance from real recordings can provide an additional constraint on the properties of the weathered layer in remote sites as well as test sites like the Nevada

  7. Velocity and stress distributions of deep seismic zone under Izu-Bonin, Japan

    Science.gov (United States)

    Jiang, Guoming; Zhang, Guibin; Jia, Zhengyuan

    2017-04-01

    Deep earthquakes can provide the deep information of the Earth directly. We have collected the waveform data from 77 deep earthquakes with depth greater than 300 km under Izu-Bonin in Japan. To obtain the velocity structures of P- and S-wave, we have inversed the double-differences of travel times from deep event-pairs. These velocity anomalies can further yield the Poisson's ratio and the porosity. Our results show that the average P-wave velocity anomaly is lower 6%, however the S-wave anomaly is higher 2% than the iasp91 model. The corresponding Poisson's ratio and porosity anomaly are -24% and -4%, respectively, which suggest that the possibility of water in the deep seismic zone is very few and the porosity might be richer. To obtain the stress distribution, we have used the ISOLA method to analyse the non-double-couple components of moment tensors of 77 deep earthquakes. The focal mechanism results show that almost half of all earthquakes have larger double-couple (DC) components, but others have clear isotropic (ISO) or compensated linear vector dipole (CLVD) components. The non-double-couple components (ISO and CLVD) seem to represent the volume around a deep earthquake changes as it occurs, which could be explained the metastable olivine phase transition. All results indicate that the metastable olivine wedge (MOW) might exist in the Pacific slab under the Izu-Bonin region and the deep earthquakes might be induced by the phase change of metastable olivine.

  8. Near‐surface void detection using a seismic landstreamer and horizontal velocity and attenuation tomography

    Science.gov (United States)

    Buckley, Sean F.; Lane, John W.

    2012-01-01

    The detection and characterization of subsurface voids plays an important role in the study of karst formations and clandestine tunnels. Horizontal velocity and attenuation tomography (HVAT) using offset‐fan shooting and a towed seismic land streamer is a simple, rapid, minimally invasive method that shows promise for detecting near‐surface voids and providing information on the orientation of linear voids. HVAT surveys were conducted over a known subsurface steam tunnel on the University of Connecticut Depot Campus, Storrs, Connecticut. First‐arrival travel‐time and amplitude data were used to produce two‐dimensional (2D) horizontal (map view) velocity and attenuation tomograms. In addition, attenuation tomograms were produced based on normalized total trace energy (TTE). Both the velocity and TTE attenuation tomograms depict an anomaly consistent with the location and orientation of the known tunnel; the TTE method, however, requires significantly less processing time, and therefore may provide a path forward to semi‐automated, near real‐time detection of near‐surface voids. Further study is needed to assess the utility of the HVAT method to detect deeper voids and the effects of a more complex geology on HVAT results.

  9. In-situ, time-lapse study of extracellular polymeric substance discharge in Streptococcus mutans biofilm.

    Science.gov (United States)

    Liu, Bernard Haochih; Yu, Li-Chieh

    2017-02-01

    Streptococcus mutans is one of the main pathogens that cause tooth decay. By metabolizing carbohydrates, S. mutans emits extracellular polymeric substance (EPS) that adheres to the tooth surface and forms layers of biofilm. Periodontal disease occurs due to the low pH environment created by S. mutans biofilm, and such an acidic environment gradually erodes tooth enamel. Since the existence of EPS is essential in the formation of biofilm, the in-situ investigation of its generation and distribution in real time is the key to the control and suppression of S. mutans biofilm. Prior studies of the biofilm formation process by fluorescence microscope, scanning electron microscope, or spectroscope have roughly divided the mechanism into three stages: (1) initial attachment; (2) microcolonies; and (3) maturation. However, these analytical methods are incapable to observe real-time changes in different locations of the extracellular matrix, and to analyze mechanical properties for single bacteria in micro and nanoscale. Since atomic force microscopy (AFM) operates by precise control of tip-sample interaction forces in liquid and in air, living microorganisms can be analyzed under near-physiological conditions. Thus, analytical techniques based on AFM constitute powerful tools for the study of biological samples, both qualitatively and quantitatively. In this study, we used AFM to quantitatively track the changes of multiple nanomechanical properties of S. mutans, including dissipation energy, adhesion force, deformation, and elastic modulus at different metabolic stages. The data revealed that the bacterial extracellular matrix has a gradient distribution in stickiness, in which different stickiness indicates the variation of EPS compositions, freshness, and metabolic stages. In-situ, time-lapse AFM images showed the local generation and distribution of EPS at different times, in which the highest adhesion distributed along sides of the S. mutans cells. Through time-lapse

  10. Magma replenishment and volcanic unrest inferred from the analysis of VT micro-seismicity and seismic velocity changes at Piton de la Fournaise Volcano

    Science.gov (United States)

    Brenguier, F.; Rivemale, E.; Clarke, D. S.; Schmid, A.; Got, J.; Battaglia, J.; Taisne, B.; Staudacher, T.; Peltier, A.; Shapiro, N. M.; Tait, S.; Ferrazzini, V.; Di Muro, A.

    2011-12-01

    Piton de la Fournaise volcano (PdF) is among the most active basaltic volcanoes worldwide with more than one eruption per year on average. Also, PdF is densely instrumented with short-period and broad-band seismometers as well as with GPS receivers. Continuous seismic waveforms are available from 1999. Piton de la Fournaise volcano has a moderate inter-eruptive seismic activity with an average of five detected Volcano-Tectonic (VT) earthquakes per day with magnitudes ranging from 0.5 to 3.5. These earthquakes are shallow and located about 2.5 kilometers beneath the edifice surface. Volcanic unrest is captured on average a few weeks before eruptions by measurements of increased VT seismicity rate, inflation of the edifice summit, and decreased seismic velocities from correlations of seismic noise. Eruptions are usually preceded by seismic swarms of VT earthquakes. Recently, almost 50 % of seismic swarms were not followed by eruptions. Within this work, we aim to gather results from different groups of the UnderVolc research project in order to better understand the processes of deep magma transfer, volcanic unrest, and pre-eruptive magma transport initiation. Among our results, we show that the period 1999-2003 was characterized by a long-term increase of VT seismicity rate coupled with a long-term decrease of seismic velocities. These observations could indicate a long-term replenishment of the magma storage area. The relocation of ten years of inter-eruptive micro-seismicity shows a narrow (~300 m long) sub-vertical fault zone thus indicating a conduit rather than an extended magma reservoir as the shallow magma feeder system. Also, we focus on the processes of short-term volcanic unrest and prove that magma intrusions within the edifice leading to eruptions activate specific VT earthquakes that are distinct from magma intrusions that do not lead to eruptions. We thus propose that, among the different pathways of magma transport within the edifice, only one will

  11. Growth Rate and Morphology of a Single Calcium Carbonate Crystal on Polysulfone Film Measured with Time Lapse Raman Micro Spectroscopy

    NARCIS (Netherlands)

    Liszka, B.; Lenferink, Aufrid T.M.; Otto, Cornelis

    2016-01-01

    The growth of single, self- nucleated calcium carbonate crystals on a polysulfone (PSU) film was investigated with high resolution, time lapse Raman imaging. The Raman images were acquired on the interface of the polymer with the crystal. The growth of crystals could thus be followed in time. PSU is

  12. Micromechanical Time-Lapse X-ray CT Study of Fatigue Damage in Uni-Directional Fibre Composites

    DEFF Research Database (Denmark)

    Jespersen, Kristine Munk; Lowe, Tristan; Withers, Philip J.

    2015-01-01

    . The geometry of the cut-out is similar to that which will be used in the time-lapse study. As the micro-mechanical damage mechanisms are small features, it is necessary to obtain a high scan resolution which sets a limit to how large the field of view can be. Therefore, it is necessary to perform several scans...

  13. Time-lapse micro-tomography analysis of the deformation response of a gellan-gum-based scaffold

    Czech Academy of Sciences Publication Activity Database

    Kytýř, Daniel; Fenclová, Nela; Zlámal, Petr; Kumpová, Ivana; Fíla, Tomáš; Koudelka_ml., Petr; Gantar, A.; Novak, S.

    2017-01-01

    Roč. 51, č. 3 (2017), s. 397-402 ISSN 1580-2949 Institutional support: RVO:68378297 Keywords : bone scaffold * gellan gum * time-lapse micro CT * digital volume correlation Subject RIV: JJ - Other Materials OBOR OECD: Materials engineering Impact factor: 0.436, year: 2016 http://mit.imt.si/Revija/izvodi/mit173/kytyr.pdf

  14. Mass conservative three-dimensional water tracer distribution from MCMC inversion of time-lapse GPR data

    NARCIS (Netherlands)

    Lalov, E.; Linde, N.; Vrugt, J.A.

    2012-01-01

    Time-lapse geophysical measurements are widely used to monitor the movement of water and solutes through the subsurface. Yet commonly used deterministic least squares inversions typically suffer from relatively poor mass recovery, spread overestimation, and limited ability to appropriately estimate

  15. Seismic velocities to characterize the soil-aquifer continuum on the Orgeval experimental basin (France)

    Science.gov (United States)

    Pasquet, S.; Ludovic, B.; Dhemaied, A.; Flipo, N.; Guérin, R.; Mouhri, A.; Faycal, R.; Vitale, Q.

    2013-12-01

    Among geophysical methods applied to hydrogeology, seismic prospecting is frequently confined to the characterization of aquifers geometry. The combined study of pressure- (P) and shear- (SH) wave velocities (respectively Vp and Vs) can however provide information about the aquifer parameters, as it is commonly done for most fluids in hydrocarbon exploration. This approach has recently been proposed in sandy aquifers with the estimation of Vp/Vs ratio. In order to address such issues in more complex aquifer systems (e.g. unconsolidated, heterogeneous or low-permeability media) we carried out P- and SH-wave seismic surveys on the Orgeval experimental basin (70 km east from Paris, France). This basin drains a multi-layer aquifer system monitored by a network of piezometers. The upper part of the aquifer system is characterized by tabular layers well delineated all over the basin thanks to Electrical Resistivity Tomography (ERT), Time Domain ElectroMagnetic (TDEM) soundings and wells. But the lateral variability of the intrinsic properties in each layer raises questions regarding the hydrodynamics of the upper aquifer and the validity of interpolations between piezometers. A simple interpretation of P- and SH-wave first arrivals for tabular models provides 1D velocity structures in very good agreement with the stratification anticipated from ERT and nearby geological logs. Vp/Vs ratios show a strong contrast at a depth consistent with the observed water table level, reinforcing the assumption of a free upper aquifer in the area. Similar experiments have to be conducted under different hydrological conditions to validate these observations. Anticipating the need to propose lateral applications of the method, we additionally performed tomographic inversions of the recorded data to retrieve 2D Vp and Vs models. If interpreted independently, both models fail to depict the stratification of the medium and the water table level cannot be straightforwardly identified

  16. Time-Lapse Monitoring of an Engineering Scaled Excavation at Federal District, Brazil by Passive Ambient NoiseInterferometry

    Science.gov (United States)

    Cárdenas-Soto, M., Sr.; Hussain, Y.; Martinez-Carvajal, H., Sr.; Martino, S., Sr.; Rocha, M., Sr.

    2016-12-01

    gave Rayleigh wave velocity changes (dv/v=-dt/t). These changes correlated well with initiation and propagation of fracture at the face of this normal slope. It is concluded that cost effective technique, PANI has a good potential for the monitoring of time lapse changes of evolving fractures.

  17. Thermal erosion of a permafrost coastline: Improving process-based models using time-lapse photography

    Science.gov (United States)

    Wobus, C.; Anderson, R.; Overeem, I.; Matell, N.; Clow, G.; Urban, F.

    2011-01-01

    Coastal erosion rates locally exceeding 30 m y-1 have been documented along Alaska's Beaufort Sea coastline, and a number of studies suggest that these erosion rates have accelerated as a result of climate change. However, a lack of direct observational evidence has limited our progress in quantifying the specific processes that connect climate change to coastal erosion rates in the Arctic. In particular, while longer ice-free periods are likely to lead to both warmer surface waters and longer fetch, the relative roles of thermal and mechanical (wave) erosion in driving coastal retreat have not been comprehensively quantified. We focus on a permafrost coastline in the northern National Petroleum Reserve-Alaska (NPR-A), where coastal erosion rates have averaged 10-15 m y-1 over two years of direct monitoring. We take advantage of these extraordinary rates of coastal erosion to observe and quantify coastal erosion directly via time-lapse photography in combination with meteorological observations. Our observations indicate that the erosion of these bluffs is largely thermally driven, but that surface winds play a crucial role in exposing the frozen bluffs to the radiatively warmed seawater that drives melting of interstitial ice. To first order, erosion in this setting can be modeled using formulations developed to describe iceberg deterioration in the open ocean. These simple models provide a conceptual framework for evaluating how climate-induced changes in thermal and wave energy might influence future erosion rates in this setting.

  18. Monitoring of In-Situ Remediation By Time Lapse 3D Geo-Electric Measurements

    Science.gov (United States)

    Kanli, A. I.; Tildy, P.; Neducza, B.; Nagy, P.; Hegymegi, C.

    2017-12-01

    Injection of chemical oxidant solution to degrade the subsurface contaminants can be used for hydrocarbon contamination remediation. In this study, we developed a non-destructive measurement strategy to monitor oxidative in-situ remediation processes. The difficulties of the presented study originate from the small volume of conductive solution that can be used due to environmental considerations. Due to the effect of conductive groundwater and the high clay content of the targeted layer and the small volume of conductive solution that can be used due to environmental considerations, a site specific synthetic modelling is necessary for measurement design involving the results of preliminary 2D ERT measurements, electrical conductivity measurements of different active agents and expected resistivity changes calculated by soil resistivity modelling. Because of chemical biodegradation, the results of soil resistivity modelling have suggested that the reagent have complex effects on contaminated soils. As a result the plume of resistivity changes caused by the injected agent was determined showing strong fracturing effect because of the high pressure of injection. 3D time-lapse geo-electric measurements were proven to provide a usable monitoring tool for in-situ remediation as a result of our sophisticated tests and synthetic modelling.

  19. ESIAC: A data products system for ERTS imagery (time-lapse viewing and measuring)

    Science.gov (United States)

    Evans, W. E.; Serebreny, S. M.

    1974-01-01

    An Electronic Satellite Image Analysis Console (ESIAC) has been developed for visual analysis and objective measurement of earth resources imagery. The system is being employed to process imagery for use by USGS investigators in several different disciplines studying dynamic hydrologic conditions. The ESIAC provides facilities for storing registered image sequences in a magnetic video disc memory for subsequent recall, enhancement, and animated display in monochrome or color. The unique feature of the system is the capability to time-lapse the ERTS imagery and/or analytic displays of the imagery. Data products have included quantitative measurements of distances and areas, brightness profiles, and movie loops of selected themes. The applications of these data products are identified and include such diverse problem areas as measurement of snowfield extent, sediment plumes from estuary dicharge, playa inventory, phreatophyte and other vegetation changes. A comparative ranking of the electronic system in terms of accuracy, cost effectiveness and data output shows it to be a viable means of data analysis.

  20. Time-lapse analysis of potential cellular responsiveness to Johrei, a Japanese healing technique

    Directory of Open Access Journals (Sweden)

    Moore Dan

    2005-01-01

    Full Text Available Abstract Background Johrei is an alternative healing practice which involves the channeling of a purported universal healing energy to influence the health of another person. Despite little evidence to support the efficacy of such practices the use of such treatments is on the rise. Methods We assessed cultured human cancer cells for potential responsiveness to Johrei treatment from a short distance. Johrei treatment was delivered by practitioners who participated in teams of two, alternating every half hour for a total of four hours of treatment. The practitioners followed a defined set of mental procedures to minimize variability in mental states between experiments. An environmental chamber maintained optimal growth conditions for cells throughout the experiments. Computerized time-lapse microscopy allowed documentation of cancer cell proliferation and cell death before, during and after Johrei treatments. Results Comparing eight control experiments with eight Johrei intervention experiments, we found no evidence of a reproducible cellular response to Johrei treatment. Conclusion Cell death and proliferation rates of cultured human cancer cells do not appear responsive to Johrei treatment from a short distance.

  1. Non-rigid estimation of cell motion in calcium time-lapse images

    Science.gov (United States)

    Hachi, Siham; Lucumi Moreno, Edinson; Desmet, An-Sofie; Vanden Berghe, Pieter; Fleming, Ronan M. T.

    2016-03-01

    Calcium imaging is a widely used technique in neuroscience permitting the simultaneous monitoring of electro- physiological activity of hundreds of neurons at single cell resolution. Identification of neuronal activity requires rapid and reliable image analysis techniques, especially when neurons fire and move simultaneously over time. Traditionally, image segmentation is performed to extract individual neurons in the first frame of a calcium sequence. Thereafter, the mean intensity is calculated from the same region of interest in each frame to infer calcium signals. However, when cells move, deform and fire, this segmentation on its own generates artefacts and therefore biased neuronal activity. Therefore, there is a pressing need to develop a more efficient cell tracking technique. We hereby present a novel vision-based cell tracking scheme using a thin-plate spline deformable model. The thin-plate spline warping is based on control points detected using the Fast from Accelerated Segment Test descriptor and tracked using the Lucas-Kanade optical flow. Our method is able to track neurons in calcium time-series, even when there are large changes in intensity, such as during a firing event. The robustness and efficiency of the proposed approach is validated on real calcium time-lapse images of a neuronal population.

  2. Monitoring the snowpack volume in a sinkhole on Mount Lebanon using time lapse Photogrammetry

    Science.gov (United States)

    Abou Chakra, C.; Gascoin, S.; Somma, J.; Drapeau, L.; Fanise, P.

    2017-12-01

    Lebanon is one of the richest country in the Middle East for water resources, thanks to its mountain ranges that trigger precipitation from the moist air masses coming from the Mediterranean Sea. Snowpack acts as natural water storage in winter and supply fresh water during spring and summer. Yet, Lebanon is facing a serious water scarcity problem due to: i) decreasing amount of precipitation and climate change; ii) major growth of population of original residence and large number of refugees during regional wars. Therefore, continuous and systematic monitoring of the Lebanese water resources is becoming crucial. The Mount Lebanon is made of karstic depressions named "sinkholes". It is important to monitor the snowmelt process inside these sinkholes because of their key role as "containers" of seasonal snow. By isolating the snowpack from sun radiation and wind, they slow down the natural melting process and sublimation, thus delaying as well the low water flow period. An observatory is set up to monitor the snowpack evolution in a pilot sinkhole located in Mount Lebanon. The system uses three time-lapse cameras and structure-from-motion principles to reconstruct the snow volume within the sinkhole. The approach is validated by standard topographic surveys. The results indicate that snow depth can be retrieved with an accuracy between 20 and 60 cm (residuals standard deviation) and a low bias of 50 cm after coregistration of the digital elevation models.

  3. Untangling cell tracks: Quantifying cell migration by time lapse image data analysis.

    Science.gov (United States)

    Svensson, Carl-Magnus; Medyukhina, Anna; Belyaev, Ivan; Al-Zaben, Naim; Figge, Marc Thilo

    2018-03-01

    Automated microscopy has given researchers access to great amounts of live cell imaging data from in vitro and in vivo experiments. Much focus has been put on extracting cell tracks from such data using a plethora of segmentation and tracking algorithms, but further analysis is normally required to draw biologically relevant conclusions. Such relevant conclusions may be whether the migration is directed or not, whether the population has homogeneous or heterogeneous migration patterns. This review focuses on the analysis of cell migration data that are extracted from time lapse images. We discuss a range of measures and models used to analyze cell tracks independent of the biological system or the way the tracks were obtained. For single-cell migration, we focus on measures and models giving examples of biological systems where they have been applied, for example, migration of bacteria, fibroblasts, and immune cells. For collective migration, we describe the model systems wound healing, neural crest migration, and Drosophila gastrulation and discuss methods for cell migration within these systems. We also discuss the role of the extracellular matrix and subsequent differences between track analysis in vitro and in vivo. Besides methods and measures, we are putting special focus on the need for openly available data and code, as well as a lack of common vocabulary in cell track analysis. © 2017 International Society for Advancement of Cytometry. © 2017 International Society for Advancement of Cytometry.

  4. Direct prediction of spatially and temporally varying physical properties from time-lapse electrical resistance data

    Science.gov (United States)

    Hermans, Thomas; Oware, Erasmus; Caers, Jef

    2016-09-01

    Time-lapse applications of electrical methods have grown significantly over the last decade. However, the quantitative interpretation of tomograms in terms of physical properties, such as salinity, temperature or saturation, remains difficult. In many applications, geophysical models are transformed into hydrological models, but this transformation suffers from spatially and temporally varying resolution resulting from the regularization used by the deterministic inversion. In this study, we investigate a prediction-focused approach (PFA) to directly estimate subsurface physical properties with electrical resistance data, circumventing the need for classic tomographic inversions. First, we generate a prior set of resistance data and physical property forecast through hydrogeological and geophysical simulations mimicking the field experiment. We reduce the dimension of both the data and the forecast through principal component analysis in order to keep the most informative part of both sets in a reduced dimension space. Then, we apply canonical correlation analysis to explore the relationship between the data and the forecast in their reduced dimension space. If a linear relationship can be established, the posterior distribution of the forecast can be directly sampled using a Gaussian process regression where the field data scores are the conditioning data. In this paper, we demonstrate PFA for various physical property distributions. We also develop a framework to propagate the estimated noise level in the reduced dimension space. We validate the results by a Monte Carlo study on the posterior distribution and demonstrate that PFA yields accurate uncertainty for the cases studied.

  5. A clustering approach applied to time-lapse ERT interpretation - Case study of Lascaux cave

    Science.gov (United States)

    Xu, Shan; Sirieix, Colette; Riss, Joëlle; Malaurent, Philippe

    2017-09-01

    The Lascaux cave, located in southwest France, is one of the most important prehistoric cave in the world that shows Paleolithic paintings. This study aims to characterize the structure of the weathered epikarst setting located above the cave using Time-Lapse Electrical Resistivity Tomography (ERT) combined with local hydrogeological and climatic environmental data. Twenty ERT profiles were carried out for two years and helped us to record the seasonal and spatial variations of the electrical resistivity of the hydraulic upstream area of the Lascaux cave. The 20 interpreted resistivity models were merged into a single synthetic model using a multidimensional statistical method (Hierarchical Agglomerative Clustering). The individual blocks from the synthetic model associated with a similar resistivity variability were gathered into 7 clusters. We combined the resistivity temporal variations with climatic and hydrogeological data to propose a geo-electrical model that relates to a conceptual geological model. We provide a geological interpretation for each cluster regarding epikarst features. The superficial clusters (no 1 & 2) are linked to effective rainfall and trees, probably a fractured limestone. Another two clusters (no 6 & 7) are linked to detrital formations (sand and clay respectively). The cluster 3 may correspond to a marly limestone that forms a non-permeable horizon. Finally, the electrical behavior of the last two clusters (no 4 & 5) is correlated with the variation of flow rate; they may be a privileged feed zone of the flow in the cave.

  6. Environmental Monitoring Of Leaks Using Time Lapsed Long Electrode Electrical Resistivity

    International Nuclear Information System (INIS)

    Rucker, D.F.; Fink, J.B.; Loke, M.H.; Myers, D.A.

    2009-01-01

    Highly industrialized areas pose significant challenges for surface based electrical resistivity characterization and monitoring due to the high degree of metallic infrastructure. The infrastructure is typically several orders of magnitude more conductive than the desired targets, preventing the geophysicist from obtaining a clear picture of the subsurface. These challenges may be minimized if steel-cased wells are used as long electrodes. We demonstrate a method of using long electrodes in a complex nuclear waste facility to monitor a simulated leak from an underground storage tank. The leak was simulated by injecting high conductivity fluid in a perforated well and the resistivity measurements were made before and after the leak test. The data were processed in four dimensions, where a regularization procedure was applied in both the time and space domains. The results showed a lowered resistivity feature develop south of the injection site. The time lapsed regularization parameter had a strong influence on the differences in inverted resistivity between the pre and post datasets, potentially making calibration of the results to specific hydrogeologic parameters difficult.

  7. Observation of human embryonic behavior in vitro by high-resolution time-lapse cinematography.

    Science.gov (United States)

    Iwata, Kyoko; Mio, Yasuyuki

    2016-07-01

    Assisted reproductive technology (ART) has yielded vast amounts of information and knowledge on human embryonic development in vitro; however, still images provide limited data on dynamic changes in the developing embryos. Using our high-resolution time-lapse cinematography (hR-TLC) system, we were able to describe normal human embryonic development continuously from the fertilization process to the hatched blastocyst stage in detail. Our hR-TLC observation also showed the embryonic abnormality of a third polar body (PB)-like substance likely containing a small pronucleus being extruded and resulting in single-pronucleus (1PN) formation, while our molecular biological investigations suggested the possibility that some 1PN embryos could be diploid, carrying both maternal and paternal genomes. Furthermore, in some embryos the extruded third PB-like substance was eventually re-absorbed into the ooplasm resulting in the formation of an uneven-sized, two-PN zygote. In addition, other hR-TLC observations showed that cytokinetic failure was correlated with equal-sized, multi-nucleated blastomeres that were also observed in the embryo showing early initiation of compaction. Assessment combining our hR-TLC with molecular biological techniques enables a better understanding of embryonic development and potential improvements in ART outcomes.

  8. Metamorphosis revealed: time-lapse three-dimensional imaging inside a living chrysalis.

    Science.gov (United States)

    Lowe, Tristan; Garwood, Russell J; Simonsen, Thomas J; Bradley, Robert S; Withers, Philip J

    2013-07-06

    Studies of model insects have greatly increased our understanding of animal development. Yet, they are limited in scope to this small pool of model species: a small number of representatives for a hyperdiverse group with highly varied developmental processes. One factor behind this narrow scope is the challenging nature of traditional methods of study, such as histology and dissection, which can preclude quantitative analysis and do not allow the development of a single individual to be followed. Here, we use high-resolution X-ray computed tomography (CT) to overcome these issues, and three-dimensionally image numerous lepidopteran pupae throughout their development. The resulting models are presented in the electronic supplementary material, as are figures and videos, documenting a single individual throughout development. They provide new insight and details of lepidopteran metamorphosis, and allow the measurement of tracheal and gut volume. Furthermore, this study demonstrates early and rapid development of the tracheae, which become visible in scans just 12 h after pupation. This suggests that there is less remodelling of the tracheal system than previously expected, and is methodologically important because the tracheal system is an often-understudied character system in development. In the future, this form of time-lapse CT-scanning could allow faster and more detailed developmental studies on a wider range of taxa than is presently possible.

  9. Aberrant behavior of mouse embryo development after blastomere biopsy as observed through time-lapse cinematography.

    Science.gov (United States)

    Ugajin, Tomohisa; Terada, Yukihiro; Hasegawa, Hisataka; Velayo, Clarissa L; Nabeshima, Hiroshi; Yaegashi, Nobuo

    2010-05-15

    To analyze whether blastomere biopsy affects early embryonal growth as observed through time-lapse cinematography. Comparative prospective study between embryos in which a blastomere was removed and embryos in which a blastomere was not removed. An experimental laboratory of the university. We calculated the time between blastocele formation and the end of hatching, the time between the start and end of hatching, the number of contractions and expansions between blastocyst formation and the end of hatching, and the maximum diameter of the expanded blastocyst. In blastomere removal embryos, compaction began at the six-cell stage instead of at the eight-cell stage. We also found that hatching was delayed in these embryos as compared with matched controls. Moreover, the frequency of contraction and expansion movements after blastocyst formation was significantly higher in the blastomere removal group as compared with the control group. Finally, the maximum diameter of the expanded blastocyst just before hatching was not significantly different between both groups. These findings suggested that blastomere removal has an adverse effect on embryonic development around the time of hatching. Thus, future developments in preimplantation genetic diagnosis and screening should involve further consideration and caution in light of the influence of blastomere biopsy on embryonal growth. Copyright 2010 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.

  10. Mathematical analysis of endothelial sibling pair cell-cell interactions using time-lapse cinematography data.

    Science.gov (United States)

    Brown, L M; Ryan, U S; Absher, M; Olazabal, B M

    1982-01-01

    The sibling pairs from two different endothelial cell cultures were analysed by time-lapse cinematography. It was shown that wounded and regular (low density seeded) cultures differed in the behaviour patterns of their siblings. The cultures differed most significantly in the minimum interdivision time (IDT) which was 27% lower for the wounded culture. In the wounded culture there was a greater correlation of IDT values between sibling pairs. IDT values recorded both for paired and for unpaired cells were shorter for the wounded than for the regular culture. The mean IDT for unpaired cells was longer than the mean IDT for paired cells in the regular culture. Thus paired cells in the regular culture, had shorter IDTs, but not as short as in the wounded culture. It was significant that in the wounded culture the first generation of siblings were very close (less than 150 microns apart) at division. Overall the behaviour differences between the two cultures resulted in a higher rate of increase in cell numbers, and thus faster repair, of the wounded monolayer.

  11. Laboratory measurements of the seismic velocities and other petrophysical properties of the Outokumpu deep drill core samples, eastern Finland

    Science.gov (United States)

    Elbra, Tiiu; Karlqvist, Ronnie; Lassila, Ilkka; Høgström, Edward; Pesonen, Lauri J.

    2011-01-01

    Petrophysical, in particular seismic velocity, measurements of the Outokumpu deep drill core (depth 2.5 km) have been carried out to characterize the geophysical nature of the Paleoproterozoic crustal section of eastern Finland and to find lithological and geophysical interpretations to the distinct crustal reflectors as observed in seismic surveys. The results show that different lithological units can be identified based on the petrophysical data. The density of the samples remained nearly constant throughout the drilled section. Only diopside-tremolite skarns and black schists exhibit higher densities. The samples are dominated by the paramagnetic behaviour with occasional ferromagnetic signature caused by serpentinitic rocks. Large variations in seismic velocities, both at ambient pressure and under in situ crustal conditions are observed. The porosity of the samples, which is extremely low, is either intrinsic by nature or caused by decompaction related to fracturing during the core retrieval. It is noteworthy that these microfractures have dramatically lowered the VP and VS values. From the measured velocities and density data we have calculated the seismic impedances, Young's modulus and Poisson's ratios for the lithological units of the Outokumpu section and from these data the reflection coefficients for the major lithological boundaries, evident in the surveyed section, were determined. The data show that the strong and distinct reflections visible in wide-angle seismic surveys are caused by interfaces between diopside-tremolite skarn and either serpentinites, mica schist or black schist.

  12. Seismic velocity structure of the forearc in northern Cascadia from Bayesian inversion of teleseismic data

    Science.gov (United States)

    Gosselin, J.; Audet, P.; Schaeffer, A. J.

    2017-12-01

    The seismic velocity structure in the forearc of subduction zones provides important constraints on material properties, with implications for seismogenesis. In Cascadia, previous studies have imaged a downgoing low-velocity zone (LVZ) characterized by an elevated P-to-S velocity ratio (Vp/Vs) down to 45 km depth, near the intersection with the mantle wedge corner, beyond which the signature of the LVZ disappears. These results, combined with the absence of a "normal" continental Moho, indicate that the down-going oceanic crust likely carries large amounts of overpressured free fluids that are released downdip at the onset of crustal eclogitization, and are further stored in the mantle wedge as serpentinite. These overpressured free fluids affect the stability of the plate interface and facilitate slow slip. These results are based on the inversion and migration of scattered teleseismic data for individual layer properties; a methodology which suffers from regularization and smoothing, non-uniqueness, and does not consider model uncertainty. This study instead applies trans-dimensional Bayesian inversion of teleseismic data collected in the forearc of northern Cascadia (the CAFÉ experiment in northern Washington) to provide rigorous, quantitative estimates of local velocity structure, and associated uncertainties (particularly Vp/Vs structure and depth to the plate interface). Trans-dimensional inversion is a generalization of fixed-dimensional inversion that includes the number (and type) of parameters required to describe the velocity model (or data error model) as unknown in the problem. This allows model complexity to be inherently determined by data information content, not by subjective regularization. The inversion is implemented here using the reversible-jump Markov chain Monte Carlo algorithm. The result is an ensemble set of candidate velocity-structure models which approximate the posterior probability density (PPD) of the model parameters. The solution

  13. 4-D imaging of seepage in earthen embankments with time-lapse inversion of self-potential data constrained by acoustic emissions localization

    Science.gov (United States)

    Rittgers, J. B.; Revil, A.; Planes, T.; Mooney, M. A.; Koelewijn, A. R.

    2015-02-01

    New methods are required to combine the information contained in the passive electrical and seismic signals to detect, localize and monitor hydromechanical disturbances in porous media. We propose a field experiment showing how passive seismic and electrical data can be combined together to detect a preferential flow path associated with internal erosion in a Earth dam. Continuous passive seismic and electrical (self-potential) monitoring data were recorded during a 7-d full-scale levee (earthen embankment) failure test, conducted in Booneschans, Netherlands in 2012. Spatially coherent acoustic emissions events and the development of a self-potential anomaly, associated with induced concentrated seepage and internal erosion phenomena, were identified and imaged near the downstream toe of the embankment, in an area that subsequently developed a series of concentrated water flows and sand boils, and where liquefaction of the embankment toe eventually developed. We present a new 4-D grid-search algorithm for acoustic emissions localization in both time and space, and the application of the localization results to add spatially varying constraints to time-lapse 3-D modelling of self-potential data in the terms of source current localization. Seismic signal localization results are utilized to build a set of time-invariant yet spatially varying model weights used for the inversion of the self-potential data. Results from the combination of these two passive techniques show results that are more consistent in terms of focused ground water flow with respect to visual observation on the embankment. This approach to geophysical monitoring of earthen embankments provides an improved approach for early detection and imaging of the development of embankment defects associated with concentrated seepage and internal erosion phenomena. The same approach can be used to detect various types of hydromechanical disturbances at larger scales.

  14. Seismic velocity structure of the crust and shallow mantle of the Central and Eastern United States by seismic surface wave imaging

    Science.gov (United States)

    Pollitz, Fred; Mooney, Walter D.

    2016-01-01

    Seismic surface waves from the Transportable Array of EarthScope's USArray are used to estimate phase velocity structure of 18 to 125 s Rayleigh waves, then inverted to obtain three-dimensional crust and upper mantle structure of the Central and Eastern United States (CEUS) down to ∼200 km. The obtained lithosphere structure confirms previously imaged CEUS features, e.g., the low seismic-velocity signature of the Cambrian Reelfoot Rift and the very low velocity at >150 km depth below an Eocene volcanic center in northwestern Virginia. New features include high-velocity mantle stretching from the Archean Superior Craton well into the Proterozoic terranes and deep low-velocity zones in central Texas (associated with the late Cretaceous Travis and Uvalde volcanic fields) and beneath the South Georgia Rift (which contains Jurassic basalts). Hot spot tracks may be associated with several imaged low-velocity zones, particularly those close to the former rifted Laurentia margin.

  15. Permeability and seismic velocity anisotropy across a ductile-brittle fault zone in crystalline rock

    Science.gov (United States)

    Wenning, Quinn C.; Madonna, Claudio; de Haller, Antoine; Burg, Jean-Pierre

    2018-05-01

    This study characterizes the elastic and fluid flow properties systematically across a ductile-brittle fault zone in crystalline rock at the Grimsel Test Site underground research laboratory. Anisotropic seismic velocities and permeability measured every 0.1 m in the 0.7 m across the transition zone from the host Grimsel granodiorite to the mylonitic core show that foliation-parallel P- and S-wave velocities systematically increase from the host rock towards the mylonitic core, while permeability is reduced nearest to the mylonitic core. The results suggest that although brittle deformation has persisted in the recent evolution, antecedent ductile fabric continues to control the matrix elastic and fluid flow properties outside the mylonitic core. The juxtaposition of the ductile strain zone next to the brittle zone, which is bounded inside the two mylonitic cores, causes a significant elastic, mechanical, and fluid flow heterogeneity, which has important implications for crustal deformation and fluid flow and for the exploitation and use of geothermal energy and geologic waste storage. The results illustrate how physical characteristics of faults in crystalline rocks change in fault zones during the ductile to brittle transitions.

  16. Upper mantle seismic velocity anomaly beneath southern Taiwan as revealed by teleseismic relative arrival times

    Science.gov (United States)

    Chen, Po-Fei; Huang, Bor-Shouh; Chiao, Ling-Yun

    2011-01-01

    Probing the lateral heterogeneity of the upper mantle seismic velocity structure beneath southern and central Taiwan is critical to understanding the local tectonics and orogeny. A linear broadband array that transects southern Taiwan, together with carefully selected teleseismic sources with the right azimuth provides useful constraints. They are capable of differentiating the lateral heterogeneity along the profile with systematic coverage of ray paths. We implement a scheme based on the genetic algorithm to simultaneously determine the relative delayed times of the teleseismic first arrivals of array data. The resulting patterns of the delayed times systematically vary as a function of the incident angle. Ray tracing attributes the observed variations to a high velocity anomaly dipping east in the mantle beneath the southeast of Taiwan. Combining the ray tracing analysis and a pseudo-spectral method to solve the 2-D wave propagations, we determine the extent of the anomaly that best fits the observations via the forward grid search. The east-dipping fast anomaly in the upper mantle beneath the southeast of Taiwan agrees with the results from several previous studies and indicates that the nature of the local ongoing arc-continent collision is likely characterized by the thin-skinned style.

  17. Absolute earthquake locations using 3-D versus 1-D velocity models below a local seismic network: example from the Pyrenees

    Science.gov (United States)

    Theunissen, T.; Chevrot, S.; Sylvander, M.; Monteiller, V.; Calvet, M.; Villaseñor, A.; Benahmed, S.; Pauchet, H.; Grimaud, F.

    2018-03-01

    Local seismic networks are usually designed so that earthquakes are located inside them (primary azimuthal gap 180° and distance to the first station higher than 15 km). Errors on velocity models and accuracy of absolute earthquake locations are assessed based on a reference data set made of active seismic, quarry blasts and passive temporary experiments. Solutions and uncertainties are estimated using the probabilistic approach of the NonLinLoc (NLLoc) software based on Equal Differential Time. Some updates have been added to NLLoc to better focus on the final solution (outlier exclusion, multiscale grid search, S-phases weighting). Errors in the probabilistic approach are defined to take into account errors on velocity models and on arrival times. The seismicity in the final 3-D catalogue is located with a horizontal uncertainty of about 2.0 ± 1.9 km and a vertical uncertainty of about 3.0 ± 2.0 km.

  18. Estimating regional pore pressure distribution using 3D seismic velocities in the Dutch Central North Sea Graben

    NARCIS (Netherlands)

    Winthaegen, P.L.A.; Verweij, J.M.

    2003-01-01

    The application of the empirical Eaton method to calibrated sonic well information and 3D seismic interval velocity data in the southeastern part of the Central North Sea Graben, using the Japsen (Glob. Planet. Change 24 (2000) 189) normal velocitydepth trend, resulted in the identification of an

  19. Mapping Deep Low Velocity Zones in Alaskan Arctic Coastal Permafrost using Seismic Surface Waves

    Science.gov (United States)

    Dou, S.; Ajo Franklin, J. B.; Dreger, D. S.

    2012-12-01

    Permafrost degradation may be an important amplifier of climate change; Thawing of near-surface sediments holds the potential of increasing greenhouse gas emissions due to microbial decomposition of preserved organic carbon. Recently, the characterization of "deep" carbon pools (several meters below the surface) in circumpolar frozen ground has increased the estimated amount of soil carbon to three times higher than what was previously thought. It is therefore potentially important to include the characteristics and processes of deeper permafrost strata (on the orders of a few to tens of meters below surface) in climate models for improving future predictions of accessible carbon and climate feedbacks. This extension is particularly relevant if deeper formations are not completely frozen and may harbor on-going microbial activity despite sub-zero temperatures. Unfortunately, the characterization of deep permafrost systems is non-trivial; logistics and drilling constraints often limit direct characterization to relatively shallow units. Geophysical measurements, either surface or airborne, are often the most effective tools for evaluating these regions. Of the available geophysical techniques, the analysis of seismic surface waves (e.g. MASW) has several unique advantages, mainly the ability to provide field-scale information with good depth resolution as well as penetration (10s to 100s of m with small portable sources). Surface wave methods are also able to resolve low velocity regions, a class of features that is difficult to characterize using traditional P-wave refraction methods. As part of the Department of Energy (DOE) Next-Generation Ecosystem Experiments (NGEE-Arctic) project, we conducted a three-day seismic field survey (May 12 - 14, 2012) at the Barrow Environmental Observatory, which is located within the Alaskan Arctic Coastal Plain. Even though permafrost at the study site is continuous, ice-rich and thick (>= 350m), our Multichannel Analysis of

  20. Improvements in seismic event locations in a deep western U.S. coal mine using tomographic velocity models and an evolutionary search algorithm

    Energy Technology Data Exchange (ETDEWEB)

    Adam Lurka; Peter Swanson [Central Mining Institute, Katowice (Poland)

    2009-09-15

    Methods of improving seismic event locations were investigated as part of a research study aimed at reducing ground control safety hazards. Seismic event waveforms collected with a 23-station three-dimensional sensor array during longwall coal mining provide the data set used in the analyses. A spatially variable seismic velocity model is constructed using seismic event sources in a passive tomographic method. The resulting three-dimensional velocity model is used to relocate seismic event positions. An evolutionary optimization algorithm is implemented and used in both the velocity model development and in seeking improved event location solutions. Results obtained using the different velocity models are compared. The combination of the tomographic velocity model development and evolutionary search algorithm provides improvement to the event locations. 13 refs., 5 figs., 4 tabs.

  1. 3-D Velocity Model of the Coachella Valley, Southern California Based on Explosive Shots from the Salton Seismic Imaging Project

    Science.gov (United States)

    Persaud, P.; Stock, J. M.; Fuis, G. S.; Hole, J. A.; Goldman, M.; Scheirer, D. S.

    2014-12-01

    We have analyzed explosive shot data from the 2011 Salton Seismic Imaging Project (SSIP) across a 2-D seismic array and 5 profiles in the Coachella Valley to produce a 3-D P-wave velocity model that will be used in calculations of strong ground shaking. Accurate maps of seismicity and active faults rely both on detailed geological field mapping and a suitable velocity model to accurately locate earthquakes. Adjoint tomography of an older version of the SCEC 3-D velocity model shows that crustal heterogeneities strongly influence seismic wave propagation from moderate earthquakes (Tape et al., 2010). These authors improve the crustal model and subsequently simulate the details of ground motion at periods of 2 s and longer for hundreds of ray paths. Even with improvements such as the above, the current SCEC velocity model for the Salton Trough does not provide a match of the timing or waveforms of the horizontal S-wave motions, which Wei et al. (2013) interpret as caused by inaccuracies in the shallow velocity structure. They effectively demonstrate that the inclusion of shallow basin structure improves the fit in both travel times and waveforms. Our velocity model benefits from the inclusion of known location and times of a subset of 126 shots detonated over a 3-week period during the SSIP. This results in an improved velocity model particularly in the shallow crust. In addition, one of the main challenges in developing 3-D velocity models is an uneven stations-source distribution. To better overcome this challenge, we also include the first arrival times of the SSIP shots at the more widely spaced Southern California Seismic Network (SCSN) in our inversion, since the layout of the SSIP is complementary to the SCSN. References: Tape, C., et al., 2010, Seismic tomography of the Southern California crust based on spectral-element and adjoint methods: Geophysical Journal International, v. 180, no. 1, p. 433-462. Wei, S., et al., 2013, Complementary slip distributions

  2. Time lapse photography as an approach to understanding glide avalanche activity

    Science.gov (United States)

    Hendrikx, Jordy; Peitzsch, Erich H.; Fagre, Daniel B.

    2012-01-01

    Avalanches resulting from glide cracks are notoriously difficult to forecast, but are a recurring problem for numerous avalanche forecasting programs. In some cases glide cracks are observed to open and then melt away in situ. In other cases, they open and then fail catastrophically as large, full-depth avalanches. Our understanding and management of these phenomena are currently limited. It is thought that an increase in the rate of snow gliding occurs prior to full-depth avalanche activity so frequent observation of glide crack movement can provide an index of instability. During spring 2011 in Glacier National Park, Montana, USA, we began an approach to track glide crack avalanche activity using a time-lapse camera focused on a southwest facing glide crack. This crack melted in-situ without failing as a glide avalanche, while other nearby glide cracks on north through southeast aspects failed. In spring 2012, a camera was aimed at a large and productive glide crack adjacent to the Going to the Sun Road. We captured three unique glide events in the field of view. Unfortunately, all of them either failed very quickly, or during periods of obscured view, so measurements of glide rate could not be obtained. However, we compared the hourly meteorological variables during the period of glide activity to the same variables prior to glide activity. The variables air temperature, relative humidity, air pressure, incoming and reflected long wave radiation, SWE, total precipitation, and snow depth were found to be statistically different for our cases examined. We propose that these are some of the potential precursors for glide avalanche activity, but do urge caution in their use, due to the simple approach and small data set size. It is hoped that by introducing a workable method to easily record glide crack movement, combined with ongoing analysis of the associated meteorological data, we will improve our understanding of when, or if, glide avalanche activity will ensue.

  3. Tracking snowmelt in the subsurface: time-lapse electrical resistivity imaging on an alpine hill slope.

    Science.gov (United States)

    Thayer, D.; Parsekian, A.; Hyde, K.; Beverly, D.; Speckman, H. N.; Ewers, B. E.

    2015-12-01

    In the mountain West region the winter snowpack provides more than 70% of our annual water supply. Modeling and predicting the timing and magnitude of snowmelt-driven water yield is difficult due to the complexities of hydrologic systems that move meltwater from snow to rivers. Particular challenges are understanding the temporal and spatial domain of subsurface hydraulic processes at relevant scales, which range from points to catchments. Subsurface characterization often requires borehole instrumentation, which is expensive and extremely difficult to install in remote, rugged terrain. Advancements in non-invasive geophysical methods allow us to monitor changes in geophysical parameters over time and infer changes in hydraulic processes. In the No-Name experimental catchment in the Medicine Bow National Forest in Wyoming, we are conducting a multi-season, time-lapse electrical resistivity imaging survey on a sub-alpine hill slope. This south-facing, partially forested slope ranges from 5 degrees to 35 degrees in steepness and consists of a soil mantle covering buried glacial talus deposits of unknown depth. A permanent grid of down-slope and cross-slope electrode arrays is monitored up to four times a day. The arrays span the entire vertical distance of the slope, from an exposed bedrock ridge to a seasonal drainage below, and cover treed and non-treed areas. Geophysical measurements are augmented by temperature and moisture time-series instrumented below the surface in a contiguous 3 meter borehole. A time-series of multiple resistivity models each day from May to July shows the changing distribution of subsurface moisture during a seasonal drying sequence punctuated by isolated rain events. Spatial patterns of changing moisture indicate that soil and gravel in the top two meters drain into a saturated layer parallel to the slope which overlies less saturated material. These results suggest that water from snowmelt and rain events tends to move down-slope beneath

  4. ENVIRONMENTAL MONITORING OF LEAKS USING TIME LAPSED LONG ELECTRODE ELECTRICAL RESISTIVITY

    International Nuclear Information System (INIS)

    Myers, D.A.; Rucker, D.F.; Fink, J.B.; Loke, M.H.

    2009-01-01

    Highly industrialized areas pose challenges for surface electrical resistivity characterization due to metallic infrastructure. The infrastructure is typically more conductive than the desired targets and will mask the deeper subsurface information. These challenges may be minimized if steel-cased wells are used as long electrodes in the area near the target. We demonstrate a method of using long electrodes to electrically monitor a simulated leak from an underground storage tank with both synthetic examples and a field demonstration. The synthetic examples place a simple target of varying electrical properties beneath a very low resistivity layer. The layer is meant to replicate the effects of infrastructure. Both surface and long electrodes are tested on the synthetic domain. The leak demonstration for the field experiment is simulated by injecting a high conductivity fluid in a perforated well within the S tank farm at Hanford, and the resistivity measurements are made before and after the leak test. All data are processed in four dimensions, where a regularization procedure is applied in both the time and space domains. The synthetic test case shows that the long electrode ERM could detect relative changes in resistivity that are commensurate with the differing target properties. The surface electrodes, on the other hand, had a more difficult time matching the original target's footprint. The field results shows a lowered resistivity feature develop south of the injection site after cessation of the injections. The time lapsed regularization parameter has a strong influence on the differences in inverted resistivity between the pre and post injection datasets, but the interpretation of the target is consistent across all values of the parameter. The long electrode ERM method may provide a tool for near real-time monitoring of leaking underground storage tanks.

  5. Applications of quantitative time lapse holographic imaging to the development of complex pharmaceutical nano formulations

    Science.gov (United States)

    Luther, Ed; Mendes, Livia; Pan, Jiayi; Costa, Daniel; Sarisozen, Can; Torchilin, Vladimir

    2018-02-01

    We rely on in vitro cellular cultures to evaluate the effects of the components of multifunctional nano-based formulations under development. We employ an incubator-adapted, label-free holographic imaging cytometer HoloMonitor M4® (Phase Holographic Imaging, Lund, Sweden) to obtain multi-day time-lapse sequences at 5- minute intervals. An automated stage allows hand-free acquisition of multiple fields of view. Our system is based on the Mach-Zehnder interferometry principle to create interference patterns which are deconvolved to produce images of the optical thickness of the field of view. These images are automatically segmented resulting in a full complement of quantitative morphological features, such as optical volume, thickness, and area amongst many others. Precise XY cell locations and the time of acquisition are also recorded. Visualization is best achieved by novel 4-Dimensional plots, where XY position is plotted overtime time (Z-directions) and cell-thickness is coded as color or gray scale brightness. Fundamental events of interest, i.e., cells undergoing mitosis or mitotic dysfunction, cell death, cell-to-cell interactions, motility are discernable. We use both 2D and 3D models of the tumor microenvironment. We report our new analysis method to track feature changes over time based on a 4-sample version of the Kolmogorov-Smirnov test. Feature A is compared to Control A, and Feature B is compared to Control B to give a 2D probability plot of the feature changes over time. As a result, we efficiently obtain vectors quantifying feature changes over time in various sample conditions, i.e., changing compound concentrations or multi-compound combinations.

  6. Source Inversion of Seismic Events Associated with the Sinkhole at Napoleonville Salt Dome, Louisiana using a 3D Velocity Model

    Science.gov (United States)

    Nayak, Avinash; Dreger, Douglas S.

    2018-05-01

    The formation of a large sinkhole at the Napoleonville salt dome (NSD), Assumption Parish, Louisiana, caused by the collapse of a brine cavern, was accompanied by an intense and complex sequence of seismic events. We implement a grid-search approach to compute centroid locations and point-source moment tensor (MT) solutions of these seismic events using ˜0.1-0.3 Hz displacement waveforms and synthetic Green's functions computed using a 3D velocity model of the western edge of the NSD. The 3D model incorporates the currently known approximate geometry of the salt dome and the overlying anhydrite-gypsum cap rock, and features a large velocity contrast between the high velocity salt dome and low velocity sediments overlying and surrounding it. For each possible location on the source grid, Green's functions (GFs) to each station were computed using source-receiver reciprocity and the finite-difference seismic wave propagation software SW4. We also establish an empirical method to rigorously assess uncertainties in the centroid location, MW and source type of these events under evolving network geometry, using the results of synthetic tests with hypothetical events and real seismic noise. We apply the methods on the entire duration of data (˜6 months) recorded by the temporary US Geological Survey network. During an energetic phase of the sequence from 24-31 July 2012 when 4 stations were operational, the events with the best waveform fits are primarily located at the western edge of the salt dome at most probable depths of ˜0.3-0.85 km, close to the horizontal positions of the cavern and the future sinkhole. The data are fit nearly equally well by opening crack MTs in the high velocity salt medium or by isotropic volume-increase MTs in the low velocity sediment layers. We find that data recorded by 6 stations during 1-2 August 2012, right before the appearance of the sinkhole, indicate that some events are likely located in the lower velocity media just outside the

  7. The preliminary results: Internal seismic velocity structure imaging beneath Mount Lokon

    Energy Technology Data Exchange (ETDEWEB)

    Firmansyah, Rizky, E-mail: rizkyfirmansyah@hotmail.com [Geophysical Engineering, Faculty of Mining and Petroleum Engineering, Institut Teknologi Bandung, Bandung, 40132 (Indonesia); Nugraha, Andri Dian, E-mail: nugraha@gf.itb.ac.id [Global Geophysical Group, Faculty of Mining and Petroleum Engineering, Institut Teknologi Bandung, Bandung, 40132 (Indonesia); Kristianto, E-mail: kris@vsi.esdm.go.id [Center for Volcanology and Geological Hazard Mitigation (CVGHM), Geological Agency, Bandung, 40122 (Indonesia)

    2015-04-24

    Historical records that before the 17{sup th} century, Mount Lokon had been dormant for approximately 400 years. In the years between 1350 and 1400, eruption ever recorded in Empung, came from Mount Lokon’s central crater. Subsequently, in 1750 to 1800, Mount Lokon continued to erupt again and caused soil damage and fall victim. After 1949, Mount Lokon dramatically increased in its frequency: the eruption interval varies between 1 – 5 years, with an average interval of 3 years and a rest interval ranged from 8 – 64 years. Then, on June 26{sup th}, 2011, standby alert set by the Center for Volcanology and Geological Hazard Mitigation. Peak activity happened on July 4{sup th}, 2011 that Mount Lokon erupted continuously until August 28{sup th}, 2011. In this study, we carefully analyzed micro-earthquakes waveform and determined hypocenter location of those events. We then conducted travel time seismic tomographic inversion using SIMULPS12 method to detemine Vp, Vs and Vp/Vs ratio structures beneath Lokon volcano in order to enhance our subsurface geological structure. During the tomographic inversion, we started from 1-D seismic velocities model obtained from VELEST33 method. Our preliminary results show low Vp, low Vs, and high Vp/Vs are observed beneath Mount Lokon-Empung which are may be associated with weak zone or hot material zones. However, in this study we used few station for recording of micro-earthquake events. So, we suggest in the future tomography study, the adding of some seismometers in order to improve ray coverage in the region is profoundly justified.

  8. Hypocenter relocation along the Sunda arc in Indonesia, using a 3D seismic velocity model

    Science.gov (United States)

    Nugraha, Andri Dian; Shiddiqi, Hasbi A.; Widiyantoro, Sri; Thurber, Clifford H.; Pesicek, Jeremy D.; Zhang, Haijiang; Wiyono, Samsul H.; Ramadhan, Mohamad; Wandano,; Irsyam, Mahsyur

    2018-01-01

    The tectonics of the Sunda arc region is characterized by the junction of the Eurasian and Indo‐Australian tectonic plates, causing complex dynamics to take place. High‐seismicity rates in the Indonesian region occur due to the interaction between these tectonic plates. The availability of a denser network of seismometers after the earthquakes of Mw">Mw 9.1 in 2004 and  Mw">Mw 8.6 in 2005 supports various seismic studies, one of which regards the precise relocation of the hypocenters. In this study, hypocenter relocation was performed using a teleseismic double‐difference (DD) relocation method (teletomoDD) combining arrival times of P and S waves from stations at local, regional, and teleseismic distances. The catalog data were taken from the Agency of Meteorology, Climatology, and Geophysics (BMKG) of Indonesia, and the International Seismological Centre (ISC) for the time period of April 2009 to May 2015. The 3D seismic‐wave velocity model with a grid size 1°×1°">1°×1° was used in the travel‐time calculations. Relocation results show a reduction in travel‐time residuals compared with the initial locations. The relocation results better illuminate subducted slabs and active faults in the region such as the Mentawai back thrust and the outer rise in the subduction zone south of Java. Focal mechanisms from the Global Centroid Moment Tensor catalog are analyzed in conjunction with the relocation results, and our synthesis of the results provides further insight into seismogenesis in the region.

  9. Seismic applications in CBM exploration and development

    Energy Technology Data Exchange (ETDEWEB)

    Richardson, S.E.; Lawton, D.C. [Calgary Univ., AB (Canada)

    2002-07-01

    This Power Point presentation reviewed seismic methods, coal seam seismology, seismology and coalbed methane (CBM) development, and time-lapse seismic imaging with reference to numerical modelling and physical testing. The issue of resolution versus detection in various seismic methods was discussed. The thinnest resolvable beds are usually about 1.0 m thick. Coal zones with thin seams can be mapped using seismic reflection, but individual seams are difficult to resolve in field data. In terms of coal seismology, it was noted that seismic surveys make it possible to identify seam thickness, field geometry, subsurface structuring and facies changes. Facies model make it possible to determine the depositional environment, coal type, coal quality and lateral continuity. Some successes in coal seismology include the Cedar Hill and Ferron fields in the San Juan Basin. Numerical modelling methods include digital dipole compressional sonic and density well logs through Ardley Coal Zone, P-wave synthetic seismograms generated in SYNTH (MATLAB), and the alteration of density/velocity values to create new seismograms. Another numerical method is to take the difference between original and altered seismograms. It was shown that dewatering causes a decrease in velocity of about 20 per cent, and a 15 per cent decrease in density. Changes as small as 5 per cent in reservoir properties can be successfully imaged. It was concluded that the identification of dewatered zones allow for optimal positioning of development wells. Further physical testing will involve wet and dry p-wave velocities, s-wave velocities will be tested, and velocities will be measured under pressure. 2 tabs., 10 figs.

  10. Model of the seismic velocity distribution in the upper lithosphere of the Vrancea seismogenic zone and within the adjacent areas

    International Nuclear Information System (INIS)

    Raileanu, Victor; Bala, Andrei

    2002-01-01

    The task of this project is to perform a detailed seismic velocity model of the P waves in the crust and upper mantle crossed by the VRANCEA 2001 seismic line and to interpret it in structural terms. The velocity model aims to contribute to a new geodynamical model of the Eastern Carpathians evolution and to a better understanding of the causes of the Vrancea earthquakes. It is performed in cooperation with the University of Karlsruhe, Germany, and University of Bucharest. The Project will be completed in 5 working stages. Vrancea 2001 is the name of the seismic line recorded with about 780 seismic instruments deployed over more then 600 km length from eastern part of Romania (east Tulcea) through Vrancea area to Aiud and south Oradea. 10 big shots with charges from 300 kg to 1500 kg dynamite were detonated along seismic line. Field data quality is from good to very good and it provides information down to the upper mantle levels. Processing of data has been performed in the first stage of present project and it consisted in merging of all individual field records in seismograms for each shotpoint. Almost 800 individual records for each out of the 10 shots were merged in 10 seismograms with about 800 channels. A seismogram of shot point S (25 km NE of Ramnicu Sarat) is given. It is visible a high energy generated by shotpoint S. Pn wave can be traced until the western end of seismic line, about 25 km from source. In the second stage of project an interpretation of seismic data is achieved for the first 5 seismograms from the eastern half of seismic line, from Tulcea to Ramnicu Sarat. It is used a forward modeling procedure. 5 unidimensional (1D) velocity-depth function models are obtained. P wave velocity-depth function models for shotpoints from O to T are presented. Velocity-depth information is extended down to 40 km for shot R and 80 km for shot S. It should noticed the unusually high velocities at the shallow levels for Dobrogea area (O and P shots) and the

  11. TLM-Tracker: software for cell segmentation, tracking and lineage analysis in time-lapse microscopy movies.

    Science.gov (United States)

    Klein, Johannes; Leupold, Stefan; Biegler, Ilona; Biedendieck, Rebekka; Münch, Richard; Jahn, Dieter

    2012-09-01

    Time-lapse imaging in combination with fluorescence microscopy techniques enable the investigation of gene regulatory circuits and uncovered phenomena like culture heterogeneity. In this context, computational image processing for the analysis of single cell behaviour plays an increasing role in systems biology and mathematical modelling approaches. Consequently, we developed a software package with graphical user interface for the analysis of single bacterial cell behaviour. A new software called TLM-Tracker allows for the flexible and user-friendly interpretation for the segmentation, tracking and lineage analysis of microbial cells in time-lapse movies. The software package, including manual, tutorial video and examples, is available as Matlab code or executable binaries at http://www.tlmtracker.tu-bs.de.

  12. On the possibility of time-lapse ultrahigh-resolution optical coherence tomography for bladder cancer grading

    Science.gov (United States)

    Yuan, Zhijia; Chen, Bai; Ren, Hugang; Pan, Yingtian

    2009-09-01

    It has been recently demonstrated that the cellular details of bladder epithelium embedded in speckle noise can be uncovered with time-lapse ultrahigh-resolution optical coherence tomography (TL-uOCT) by proper time-lapse frame averaging that takes advantage of cellular micromotion in fresh biological tissue ex vivo. Here, spectral-domain 3-D TL-uOCT is reported to further improve the image fidelity, and new experimental evidence is presented to differentiate normal and cancerous nuclei of rodent bladder epithelia. Results of animal cancer study reveal that despite a slight overestimation (e.g., cancerous (e.g., high-grade DN''~13 μm) urothelia, which may potentially be very useful for enhancing the diagnosis of nonpapillary bladder cancer. More animal study is being conducted to examine the utility to differentiate hyperplasia, dysplasia, and carcinoma in situ.

  13. Model-Based Generation of Synthetic 3D Time-Lapse Sequences of Motile Cells with Growing Filopodia

    OpenAIRE

    Sorokin , Dmitry ,; Peterlik , Igor; Ulman , Vladimír ,; Svoboda , David; Maška , Martin

    2017-01-01

    International audience; The existence of benchmark datasets is essential to objectively evaluate various image analysis methods. Nevertheless, manual annotations of fluorescence microscopy image data are very laborious and not often practicable, especially in the case of 3D+t experiments. In this work, we propose a simulation system capable of generating 3D time-lapse sequences of single motile cells with filopodial protrusions, accompanied by inherently generated ground truth. The system con...

  14. How to connect time-lapse recorded trajectories of motile microorganisms with dynamical models in continuous time

    DEFF Research Database (Denmark)

    Pedersen, Jonas Nyvold; Li, Liang; Gradinaru, Cristian

    2016-01-01

    We provide a tool for data-driven modeling of motility, data being time-lapse recorded trajectories. Several mathematical properties of a model to be found can be gleaned from appropriate model-independent experimental statistics, if one understands how such statistics are distorted by the finite...... of these effects that are valid for any reasonable model for persistent random motion. Our findings are illustrated with experimental data and Monte Carlo simulations....

  15. Time-lapse three-dimensional inversion of complex conductivity data using an active time constrained (ATC) approach

    Science.gov (United States)

    Karaoulis, M.; Revil, A.; Werkema, D.D.; Minsley, B.J.; Woodruff, W.F.; Kemna, A.

    2011-01-01

    Induced polarization (more precisely the magnitude and phase of impedance of the subsurface) is measured using a network of electrodes located at the ground surface or in boreholes. This method yields important information related to the distribution of permeability and contaminants in the shallow subsurface. We propose a new time-lapse 3-D modelling and inversion algorithm to image the evolution of complex conductivity over time. We discretize the subsurface using hexahedron cells. Each cell is assigned a complex resistivity or conductivity value. Using the finite-element approach, we model the in-phase and out-of-phase (quadrature) electrical potentials on the 3-D grid, which are then transformed into apparent complex resistivity. Inhomogeneous Dirichlet boundary conditions are used at the boundary of the domain. The calculation of the Jacobian matrix is based on the principles of reciprocity. The goal of time-lapse inversion is to determine the change in the complex resistivity of each cell of the spatial grid as a function of time. Each model along the time axis is called a 'reference space model'. This approach can be simplified into an inverse problem looking for the optimum of several reference space models using the approximation that the material properties vary linearly in time between two subsequent reference models. Regularizations in both space domain and time domain reduce inversion artefacts and improve the stability of the inversion problem. In addition, the use of the time-lapse equations allows the simultaneous inversion of data obtained at different times in just one inversion step (4-D inversion). The advantages of this new inversion algorithm are demonstrated on synthetic time-lapse data resulting from the simulation of a salt tracer test in a heterogeneous random material described by an anisotropic semi-variogram. ?? 2011 The Authors Geophysical Journal International ?? 2011 RAS.

  16. Derivation of site-specific relationships between hydraulic parameters and p-wave velocities based on hydraulic and seismic tomography

    Energy Technology Data Exchange (ETDEWEB)

    Brauchler, R.; Doetsch, J.; Dietrich, P.; Sauter, M.

    2012-01-10

    In this study, hydraulic and seismic tomographic measurements were used to derive a site-specific relationship between the geophysical parameter p-wave velocity and the hydraulic parameters, diffusivity and specific storage. Our field study includes diffusivity tomograms derived from hydraulic travel time tomography, specific storage tomograms, derived from hydraulic attenuation tomography, and p-wave velocity tomograms, derived from seismic tomography. The tomographic inversion was performed in all three cases with the SIRT (Simultaneous Iterative Reconstruction Technique) algorithm, using a ray tracing technique with curved trajectories. The experimental set-up was designed such that the p-wave velocity tomogram overlaps the hydraulic tomograms by half. The experiments were performed at a wellcharacterized sand and gravel aquifer, located in the Leine River valley near Göttingen, Germany. Access to the shallow subsurface was provided by direct-push technology. The high spatial resolution of hydraulic and seismic tomography was exploited to derive representative site-specific relationships between the hydraulic and geophysical parameters, based on the area where geophysical and hydraulic tests were performed. The transformation of the p-wave velocities into hydraulic properties was undertaken using a k-means cluster analysis. Results demonstrate that the combination of hydraulic and geophysical tomographic data is a promising approach to improve hydrogeophysical site characterization.

  17. Joint inversion of seismic and gravity data for imaging seismic velocity structure of the crust and upper mantle beneath Utah, United States

    Science.gov (United States)

    Syracuse, E. M.; Zhang, H.; Maceira, M.

    2017-10-01

    We present a method for using any combination of body wave arrival time measurements, surface wave dispersion observations, and gravity data to simultaneously invert for three-dimensional P- and S-wave velocity models. The simultaneous use of disparate data types takes advantage of the differing sensitivities of each data type, resulting in a comprehensive and higher resolution three-dimensional geophysical model. In a case study for Utah, we combine body wave first arrivals mainly from the USArray Transportable Array, Rayleigh wave group and phase velocity dispersion data, and Bouguer gravity anomalies to invert for crustal and upper mantle structure of the region. Results show clear delineations, visible in both P- and S-wave velocities, between the three main tectonic provinces in the region. Without the inclusion of the surface wave and gravity constraints, these delineations are less clear, particularly for S-wave velocities. Indeed, checkerboard tests confirm that the inclusion of the additional datasets dramatically improves S-wave velocity recovery, with more subtle improvements to P-wave velocity recovery, demonstrating the strength of the method in successfully recovering seismic velocity structure from multiple types of constraints.

  18. Shear-wave velocities beneath the Harrat Rahat volcanic field, Saudi Arabia, using ambient seismic noise analysis

    Science.gov (United States)

    Civilini, F.; Mooney, W.; Savage, M. K.; Townend, J.; Zahran, H. M.

    2017-12-01

    We present seismic shear-velocities for Harrat Rahat, a Cenozoic bimodal alkaline volcanic field in west-central Saudi Arabia, using seismic tomography from natural ambient noise. This project is part of an overall effort by the Saudi Geological Survey and the United States Geological Survey to describe the subsurface structure and assess hazards within the Saudi Arabian shield. Volcanism at Harrat Rahat began approximately 10 Ma, with at least three pulses around 10, 5, and 2 Ma, and at least several pulses in the Quaternary from 1.9 Ma to the present. This area is instrumented by 14 broadband Nanometrics Trillium T120 instruments across an array aperture of approximately 130 kilometers. We used a year of recorded natural ambient noise to determine group and phase velocity surface wave dispersion maps with a 0.1 decimal degree resolution for radial-radial, transverse-transverse, and vertical-vertical components of the empirical Green's function. A grid-search method was used to carry out 1D shear-velocity inversions at each latitude-longitude point and the results were interpolated to produce pseudo-3D shear velocity models. The dispersion maps resolved a zone of slow surface wave velocity south-east of the city of Medina spatially correlated with the 1256 CE eruption. A crustal layer interface at approximately 20 km depth was determined by the inversions for all components, matching the results of prior seismic-refraction studies. Cross-sections of the 3D shear velocity models were compared to gravity measurements obtained in the south-east edge of the field. We found that measurements of low gravity qualitatively correlate with low values of shear-velocity below 20 km along the cross-section profile. We apply these methods to obtain preliminary tomography results on the entire Arabian Shield.

  19. Prediction of in-vitro developmental competence of early cleavage-stage mouse embryos with compact time-lapse equipment.

    Science.gov (United States)

    Pribenszky, Csaba; Losonczi, Eszter; Molnár, Miklós; Lang, Zsolt; Mátyás, Szabolcs; Rajczy, Klára; Molnár, Katalin; Kovács, Péter; Nagy, Péter; Conceicao, Jason; Vajta, Gábor

    2010-03-01

    Single blastocyst transfer is regarded as an efficient way to achieve high pregnancy rates and to avoid multiple pregnancies. Risk of cancellation of transfer due to a lack of available embryos may be reduced by early prediction of blastocyst development. Time-lapse investigation of mouse embryos shows that the time of the first and second cleavage (to the 2- and 3-cell stages, respectively) has a strong predictive value for further development in vitro, while cleavage from the 3-cell to the 4-cell stage has no predictive value. In humans, embryo fragmentation during preimplantation development has been associated with lower pregnancy rates and a higher incidence of developmental abnormalities. Analysis of time-lapse records shows that most fragmentation is reversible in the mouse and is resorbed in an average of 9 h. Daily or bi-daily microscopic checks of embryo development, applied routinely in human IVF laboratories, would fail to detect 36 or 72% of these fragmentations, respectively. Fragmentation occurring in a defined time frame has a strong predictive value for in-vitro embryo development. The practical compact system used in the present trial, based on the 'one camera per patient' principle, has eliminated the usual disadvantages of time-lapse investigations and is applicable for the routine follow-up of in-vitro embryo development. Copyright 2009 Reproductive Healthcare Ltd. Published by Elsevier Ltd. All rights reserved.

  20. A Versatile Time-Lapse Camera System Developed by the Hawaiian Volcano Observatory for Use at Kilauea Volcano, Hawaii

    Science.gov (United States)

    Orr, Tim R.; Hoblitt, Richard P.

    2008-01-01

    Volcanoes can be difficult to study up close. Because it may be days, weeks, or even years between important events, direct observation is often impractical. In addition, volcanoes are often inaccessible due to their remote location and (or) harsh environmental conditions. An eruption adds another level of complexity to what already may be a difficult and dangerous situation. For these reasons, scientists at the U.S. Geological Survey (USGS) Hawaiian Volcano Observatory (HVO) have, for years, built camera systems to act as surrogate eyes. With the recent advances in digital-camera technology, these eyes are rapidly improving. One type of photographic monitoring involves the use of near-real-time network-enabled cameras installed at permanent sites (Hoblitt and others, in press). Time-lapse camera-systems, on the other hand, provide an inexpensive, easily transportable monitoring option that offers more versatility in site location. While time-lapse systems lack near-real-time capability, they provide higher image resolution and can be rapidly deployed in areas where the use of sophisticated telemetry required by the networked cameras systems is not practical. This report describes the latest generation (as of 2008) time-lapse camera system used by HVO for photograph acquisition in remote and hazardous sites on Kilauea Volcano.

  1. A time-series method for automated measurement of changes in mitotic and interphase duration from time-lapse movies.

    Directory of Open Access Journals (Sweden)

    Frederic D Sigoillot

    Full Text Available Automated time-lapse microscopy can visualize proliferation of large numbers of individual cells, enabling accurate measurement of the frequency of cell division and the duration of interphase and mitosis. However, extraction of quantitative information by manual inspection of time-lapse movies is too time-consuming to be useful for analysis of large experiments.Here we present an automated time-series approach that can measure changes in the duration of mitosis and interphase in individual cells expressing fluorescent histone 2B. The approach requires analysis of only 2 features, nuclear area and average intensity. Compared to supervised learning approaches, this method reduces processing time and does not require generation of training data sets. We demonstrate that this method is as sensitive as manual analysis in identifying small changes in interphase or mitotic duration induced by drug or siRNA treatment.This approach should facilitate automated analysis of high-throughput time-lapse data sets to identify small molecules or gene products that influence timing of cell division.

  2. Retrieval of sea surface velocities using sequential Ocean Colour ...

    Indian Academy of Sciences (India)

    R. Narasimhan (Krishtel eMaging) 1461 1996 Oct 15 13:05:22

    pended sediment dispersion patterns, in sequential two time lapsed images. .... face advective velocities consists essentially of iden- tifying the ... matrix is time consuming, a significant reduction .... Chauhan, P. 2002 Personal Communication.

  3. Characterization for capillary barriers effects in a sand box test using time-lapsed GPR measurements

    Science.gov (United States)

    Kuroda, S.; Ishii, N.; Morii, T.

    2017-12-01

    Capillary barriers have been known as the method to protect subsurface regions against infiltration from soil surface. It is caused by essentially heterogeneous structure in permeability or soil physical property and produce non-uniform infiltration process then, in order to estimate the actual situation of the capillary barrier effect, the site-characterization with imaging technique like geophysical prospecting is effective. In this study, we examine the applicability of GPR to characterization for capillary barriers. We built a sand box with 90x340x90cm in which a thin high-permeable gravel layer was embedded as a capillary barrier. We conducted an infiltration test in the sand box using porous tube array for irrigation. It is expected to lead to non-uniform flow of soil water induced by capillary barrier effects. We monitored this process by various types of GPR measurements, including time-lapsed common offset profiling (COP) with multi- frequency antenna and transmission measurements like cross-borehole radar. At first, we conducted GPR common-offset survey. It could show the depth of capillary barrier in sand box. After that we conducted the infiltration test and GPR monitoring for infiltration process. GPR profiles can detect the wetting front and estimate water content change in the soil layer above the capillary barrier. From spatial change in these results we can estimate the effect of capillary barrier and the zone where the break through occur or not. Based on these results, we will discuss the applicability of GPR for monitoring the phenomena around the capillary barrier of soil. At first, we conducted GPR common-offset survey. It could show the depth of capillary barrier in sand box. After that we conducted the infiltration test and GPR monitoring for infiltration process. GPR profiles can detect the wetting front and estimate water content change in the soil layer above the capillary barrier. From spatial change in these results we can estimate the

  4. A Novel Methodology for Characterizing Cell Subpopulations in Automated Time-lapse Microscopy

    Directory of Open Access Journals (Sweden)

    Georges Hattab

    2018-02-01

    Full Text Available Time-lapse imaging of cell colonies in microfluidic chambers provides time series of bioimages, i.e., biomovies. They show the behavior of cells over time under controlled conditions. One of the main remaining bottlenecks in this area of research is the analysis of experimental data and the extraction of cell growth characteristics, such as lineage information. The extraction of the cell line by human observers is time-consuming and error-prone. Previously proposed methods often fail because of their reliance on the accurate detection of a single cell, which is not possible for high density, high diversity of cell shapes and numbers, and high-resolution images with high noise. Our task is to characterize subpopulations in biomovies. In order to shift the analysis of the data from individual cell level to cellular groups with similar fluorescence or even subpopulations, we propose to represent the cells by two new abstractions: the particle and the patch. We use a three-step framework: preprocessing, particle tracking, and construction of the patch lineage. First, preprocessing improves the signal-to-noise ratio and spatially aligns the biomovie frames. Second, cell sampling is performed by assuming particles, which represent a part of a cell, cell or group of contiguous cells in space. Particle analysis includes the following: particle tracking, trajectory linking, filtering, and color information, respectively. Particle tracking consists of following the spatiotemporal position of a particle and gives rise to coherent particle trajectories over time. Typical tracking problems may occur (e.g., appearance or disappearance of cells, spurious artifacts. They are effectively processed using trajectory linking and filtering. Third, the construction of the patch lineage consists in joining particle trajectories that share common attributes (i.e., proximity and fluorescence intensity and feature common ancestry. This step is based on patch finding

  5. Crustal seismicity and the earthquake catalog maximum moment magnitudes (Mcmax) in stable continental regions (SCRs): correlation with the seismic velocity of the lithosphere

    Science.gov (United States)

    Mooney, Walter D.; Ritsema, Jeroen; Hwang, Yong Keun

    2012-01-01

    A joint analysis of global seismicity and seismic tomography indicates that the seismic potential of continental intraplate regions is correlated with the seismic properties of the lithosphere. Archean and Early Proterozoic cratons with cold, stable continental lithospheric roots have fewer crustal earthquakes and a lower maximum earthquake catalog moment magnitude (Mcmax). The geographic distribution of thick lithospheric roots is inferred from the global seismic model S40RTS that displays shear-velocity perturbations (δVS) relative to the Preliminary Reference Earth Model (PREM). We compare δVS at a depth of 175 km with the locations and moment magnitudes (Mw) of intraplate earthquakes in the crust (Schulte and Mooney, 2005). Many intraplate earthquakes concentrate around the pronounced lateral gradients in lithospheric thickness that surround the cratons and few earthquakes occur within cratonic interiors. Globally, 27% of stable continental lithosphere is underlain by δVS≥3.0%, yet only 6.5% of crustal earthquakes with Mw>4.5 occur above these regions with thick lithosphere. No earthquakes in our catalog with Mw>6 have occurred above mantle lithosphere with δVS>3.5%, although such lithosphere comprises 19% of stable continental regions. Thus, for cratonic interiors with seismically determined thick lithosphere (1) there is a significant decrease in the number of crustal earthquakes, and (2) the maximum moment magnitude found in the earthquake catalog is Mcmax=6.0. We attribute these observations to higher lithospheric strength beneath cratonic interiors due to lower temperatures and dehydration in both the lower crust and the highly depleted lithospheric root.

  6. Crustal seismicity and the earthquake catalog maximum moment magnitude (Mcmax) in stable continental regions (SCRs): Correlation with the seismic velocity of the lithosphere

    Science.gov (United States)

    Mooney, Walter D.; Ritsema, Jeroen; Hwang, Yong Keun

    2012-12-01

    A joint analysis of global seismicity and seismic tomography indicates that the seismic potential of continental intraplate regions is correlated with the seismic properties of the lithosphere. Archean and Early Proterozoic cratons with cold, stable continental lithospheric roots have fewer crustal earthquakes and a lower maximum earthquake catalog moment magnitude (Mcmax). The geographic distribution of thick lithospheric roots is inferred from the global seismic model S40RTS that displays shear-velocity perturbations (δVS) relative to the Preliminary Reference Earth Model (PREM). We compare δVS at a depth of 175 km with the locations and moment magnitudes (Mw) of intraplate earthquakes in the crust (Schulte and Mooney, 2005). Many intraplate earthquakes concentrate around the pronounced lateral gradients in lithospheric thickness that surround the cratons and few earthquakes occur within cratonic interiors. Globally, 27% of stable continental lithosphere is underlain by δVS≥3.0%, yet only 6.5% of crustal earthquakes with Mw>4.5 occur above these regions with thick lithosphere. No earthquakes in our catalog with Mw>6 have occurred above mantle lithosphere with δVS>3.5%, although such lithosphere comprises 19% of stable continental regions. Thus, for cratonic interiors with seismically determined thick lithosphere (1) there is a significant decrease in the number of crustal earthquakes, and (2) the maximum moment magnitude found in the earthquake catalog is Mcmax=6.0. We attribute these observations to higher lithospheric strength beneath cratonic interiors due to lower temperatures and dehydration in both the lower crust and the highly depleted lithospheric root.

  7. Spatiotemporal seismic velocity change in the Earth's subsurface associated with large earthquake: contribution of strong ground motion and crustal deformation

    Science.gov (United States)

    Sawazaki, K.

    2016-12-01

    It is well known that seismic velocity of the subsurface medium changes after a large earthquake. The cause of the velocity change is roughly attributed to strong ground motion (dynamic strain change), crustal deformation (static strain change), and fracturing around the fault zone. Several studies have revealed that the velocity reduction down to several percent concentrates at the depths shallower than several hundred meters. The amount of velocity reduction correlates well with the intensity of strong ground motion, which indicates that the strong motion is the primary cause of the velocity reduction. Although some studies have proposed contributions of coseismic static strain change and fracturing around fault zone to the velocity change, separation of their contributions from the site-related velocity change is usually difficult. Velocity recovery after a large earthquake is also widely observed. The recovery process is generally proportional to logarithm of the lapse time, which is similar to the behavior of "slow dynamics" recognized in laboratory experiments. The time scale of the recovery is usually months to years in field observations, while it is several hours in laboratory experiments. Although the factor that controls the recovery speed is not well understood, cumulative strain change due to post-seismic deformation, migration of underground water, mechanical and chemical reactions on the crack surface could be the candidate. In this study, I summarize several observations that revealed spatiotemporal distribution of seismic velocity change due to large earthquakes; especially I focus on the case of the M9.0 2011 Tohoku earthquake. Combining seismograms of Hi-net (high-sensitivity) and KiK-net (strong motion), geodetic records of GEONET and the seafloor GPS/Acoustic ranging, I investigate contribution of the strong ground motion and crustal deformation to the velocity change associated with the Tohoku earthquake, and propose a gross view of

  8. STUDY OF TIME LAPSE IN FOREIGN BODY ASPIRATION IN RELATION TO CHEST X - RAY AND TYPE OF FOREIGN BODY

    Directory of Open Access Journals (Sweden)

    Salma

    2015-10-01

    Full Text Available INTRODUCTI ON: Foreign body aspiration in pediatrics is a potentially fatal accident which will continue until children explore their surroundings with their hand and mouth. Pediatric aspirations will persist until mankind exists. Not all foreign body aspirations are witnessed hence chances of delay in diagnosing an aspiration are high. Delay in diagnosis depends on site and character of foreign body aspirated. The chest x - ray findings and type of foreign body extracted vary depending on the duration the foreign body remains in airway . OBJECTIVE: To study the X - ray finding in pediatric airway aspiration and its relation to time lapse, the type and site of lodgment of foreign body extracted via bronchoscopy. The type of foreign body in relation to time lapse in aspiration. MATERIAL AND METHODS: This was a prospective study done in Bapuji child health institute and research center, JJM Medical College, Davangere . History and pre bronchoscopy x - Ray finding were noted for 65 children who were posted for suspicious bronchoscopy from August 2011 to September 2013. 11 children were excluded from study as they showed no foreign body on bronchoscopy. Time lapse in aspir ation and seeking medical care was noted. The bronchoscopic findings regarding site of foreign body lodgment and type of foreign body were recorded. The type of foreign body and variation of x - ray picture in relation to time lapse in aspiration were noted. Data collected was analyzed using descriptive statistics. RESULT: It was observed that mean age was 28 months. About 80% of the cases were between 1 to 3 years age. 82% (n=53/54 were radio lucent foreign body, only 1.5% (n=1/54 were radio o paque. Site of lodgment of foreign body was right main bronchus in 48% (n=26/54, left main bronchus 46% (n=25/54 , tracheal 1.85% (n=1/54, subglottic 1.85% (n=1/54, carinal 1.85% (n=1/54, multiple site i.e. left bronchus +right bronchus+ carinal 1.85% (n=1/54. Groundnut was most common

  9. Seismic Velocity Structure and Improved Seismic Image of the Southern Depression of the Tainan Basin from Pre-Stack Depth Migration

    Directory of Open Access Journals (Sweden)

    Qunshu Tang Chan Zheng

    2010-01-01

    Full Text Available In this paper, a velocity model of the Southern Depression of the Tainan Basin is obtained along with its migrated image from an iterative pre-stack depth migration approach. The Cenozoic strata are uniformly layered with velocities varying from ~1.8 to ~3.6 km s-1. However, the general velocity is slightly lower in the NW segment than the SE. Both fractures and burial depth might be the controls of their seismic velocities. There is an unconformable contact between the Cenozoic and underlying Mesozoic strata with an abrupt velocity jump from ~3.2 to ~4.3 km s-1. The Mesozoic strata are recognized with acoustically distinct reflection patterns (chaotic, deformed and discontinuous and complex internal structures (uplift, folds and faults. Their interval velocities range from ~4.3 to ~4.7 km s-1 within a depth from ~3.5 down to ~12.5 km, and the maximum depositional thickness reaches up to 6.5 km. Multiple tectonic events such as collision, subsidence and uplift might be responsible for the complexity of the Mesozoic strata.

  10. Joint inversion of teleseismic P waveforms and surface-wave group velocities from ambient seismic noise in the Bohemian Massif

    Czech Academy of Sciences Publication Activity Database

    Růžek, Bohuslav; Plomerová, Jaroslava; Babuška, Vladislav

    2012-01-01

    Roč. 56, č. 1 (2012), s. 107-140 ISSN 0039-3169 R&D Projects: GA ČR GA205/07/1088; GA AV ČR IAA300120709; GA MŠk LM2010008 Institutional research plan: CEZ:AV0Z30120515 Keywords : receiver function * seismic noise * joint inversion * Bohemian Massif * velocity structure Subject RIV: DC - Siesmology, Volcanology, Earth Structure Impact factor: 0.975, year: 2012

  11. 2.5D seismic velocity modelling in the south-eastern Romanian Carpathians Orogen and its foreland

    Science.gov (United States)

    Bocin, Andrei; Stephenson, Randell; Tryggvason, Ari; Panea, Ionelia; Mocanu, Victor; Hauser, Franz; Matenco, Liviu

    2005-12-01

    The DACIA-PLAN (Danube and Carpathian Integrated Action on Processes in the Lithosphere and Neotectonics) deep seismic reflection survey was performed in August-September 2001, with the objective of obtaining new information on the deep structure of the external Carpathians nappe system and the architecture of the Tertiary/Quaternary basins developed within and adjacent to the Vrancea zone, including the rapidly subsiding Focsani Basin. The DACIA-PLAN profile is about 140 km long, having a roughly WNW-ESE direction, from near the southeast Transylvanian Basin, across the mountainous south-eastern Carpathians and their foreland to near the Danube River. A high resolution 2.5D velocity model of the upper crust along the seismic profile has been determined from a tomographic inversion of the DACIA-PLAN first arrival data. The results show that the data fairly accurately resolve the transition from sediment to crystalline basement beneath the Focsani Basin, where industry seismic data are available for correlation, at depths up to about 10 km. Beneath the external Carpathians nappes, apparent basement (material with velocities above 5.8 km/s) lies at depths as shallow as 3-4 km, which is less than previously surmised on the basis of geological observations. The first arrival travel-time data suggest that there is significant lateral structural heterogeneity on the apparent basement surface in this area, suggesting that the high velocity material may be involved in Carpathian thrusting.

  12. Detailed seismic velocity structure of the ultra-slow spread crust at the Mid-Cayman Spreading Center from travel-time tomography and synthetic seismograms

    Science.gov (United States)

    Harding, J.; Van Avendonk, H. J.; Hayman, N. W.; Grevemeyer, I.; Peirce, C.

    2017-12-01

    The Mid-Cayman Spreading Center (MCSC), an ultraslow-spreading center in the Caribbean Sea, has formed highly variable oceanic crust. Seafloor dredges have recovered extrusive basalts in the axial deeps as well as gabbro on bathymetric highs and exhumed mantle peridotite along the only 110 km MCSC. Wide-angle refraction data were collected with active-source ocean bottom seismometers in April, 2015, along lines parallel and across the MCSC. Travel-time tomography produces relatively smooth 2-D tomographic models of compressional wave velocity. These velocity models reveal large along- and across-axis variations in seismic velocity, indicating possible changes in crustal thickness, composition, faulting, and magmatism. It is difficult, however, to differentiate between competing interpretations of seismic velocity using these tomographic models alone. For example, in some areas the seismic velocities may be explained by either thin igneous crust or exhumed, serpentinized mantle. Distinguishing between these two interpretations is important as we explore the relationships between magmatism, faulting, and hydrothermal venting at ultraslow-spreading centers. We therefore improved our constraints on the shallow seismic velocity structure of the MCSC by modeling the amplitude of seismic refractions in the wide-angle data set. Synthetic seismograms were calculated with a finite-difference method for a range of models with different vertical velocity gradients. Small-scale features in the velocity models, such as steep velocity gradients and Moho boundaries, were explored systematically to best fit the real data. With this approach, we have improved our understanding of the compressional velocity structure of the MCSC along with the geological interpretations that are consistent with three seismic refraction profiles. Line P01 shows a variation in the thinness of lower seismic velocities along the axis, indicating two segment centers, while across-axis lines P02 and P03

  13. Crustal structure beneath discovery bank in the South Scotia Sea from group velocity tomography and seismic reflection data

    International Nuclear Information System (INIS)

    Vuan, A.; Lodolo, E.; Panza, G.F.

    2003-09-01

    Bruce, Discovery, Herdman and Jane Banks, all located along the central-eastern part of the South Scotia Ridge (i.e., the Antarctica-Scotia plate boundary), represent isolated topographic reliefs surrounded by relatively young oceanic crust, whose petrological and structural nature is still the subject of speculations due to the lack of resolving data. In the Scotia Sea and surrounding regions negative anomalies of about 34% are reported in large-scale group velocity tomography maps. The spatial resolution (∼500 km) of these maps does not warrant any reliable interpretation of such anomalies. A recent surface wave tomography in the same area, performed using broad band seismic stations and 300 regional events, shows that in the period range from 15 s to 50 s the central-eastern part of the South Scotia Ridge is characterized by negative anomalies of the group velocities as large as 6. The resolution of our data set (∼300 km) makes it possible to distinguish an area (centered at 61 deg S and 36 deg W) with a crust thicker than 25 km, and a shear wave velocity vs. depth profile similar to that found beneath the northern tip of the Antarctic Peninsula and southern South America. Rayleigh and Love wave dispersion curves are inverted in the period range from 15 s to 80 s to obtain shear wave velocity profiles that suggest a continental nature of Discovery Bank. The continental-type crust of this topographic relief is in agreement with the interpretation of a multi-channel seismic reflection profile acquired across this rise. Peculiar acoustic facies are observed in this profile and are interpreted as thinned and faulted continental plateau. The boundaries of the negative group velocity anomalies are marked by a high seismicity rate. Historical normal faulting earthquakes with magnitude around 7 are localised between the low velocity anomaly region in the eastern South Scotia Ridge and the high velocity anomaly region associated with the surrounding oceanic crust

  14. Uppermost mantle seismic velocity and anisotropy in the Euro-Mediterranean region from Pn and Sn tomography

    Science.gov (United States)

    Díaz, J.; Gil, A.; Gallart, J.

    2013-01-01

    In the last 10-15 years, the number of high quality seismic stations monitoring the Euro-Mediterranean region has increased significantly, allowing a corresponding improvement in structural constraints. We present here new images of the seismic velocity and anisotropy variations in the uppermost mantle beneath this complex area, compiled from inversion of Pn and Sn phases sampling the whole region. The method of Hearn has been applied to the traveltime arrivals of the International Seismological Center catalogue for the time period 1990-2010. A total of 579 753 Pn arrivals coming from 12 377 events recorded at 1 408 stations with epicentral distances between 220 km and 1 400 km have been retained after applying standard quality criteria (maximum depth, minimum number of recordings, maximum residual values …). Our results show significant features well correlated with surface geology and evidence the heterogeneous character of the Euro-Mediterranean lithosphere. The station terms reflect the existence of marked variations in crustal thickness, consistent with available Moho depths inferred from active seismic experiments. The highest Pn velocities are observed along a continuous band from the Po Basin to the northern Ionian Sea. Other high velocity zones include the Ligurian Basin, the Valencia Trough, the southern Alboran Sea and central part of the Algerian margin. Most significant low-velocity values are associated to orogenic belts (Betics, Pyrenees, Alps, Apennines and Calabrian Arc, Dinarides-Hellenides), and low-velocity zones are also identified beneath Sardinia and the Balearic Islands. The introduction of an anisotropic term enhances significantly the lateral continuity of the anomalies, in particular in the most active tectonic areas. Pn anisotropy shows consistent orientations subparallel to major orogenic structures, such as Betics, Apennines, Calabrian Arc and Alps. The Sn tomographic image has lower resolution but confirms independently most of the

  15. Time-Lapse Seismic Monitoring and Performance Assessment of CO2 Sequestration in Hydrocarbon Reservoirs

    Energy Technology Data Exchange (ETDEWEB)

    Datta-Gupta, Akhil [Texas Engineering Experiment Station, College Station, TX (United States)

    2017-06-15

    Carbon dioxide sequestration remains an important and challenging research topic as a potentially viable approach for mitigating the effects of greenhouse gases on global warming (e.g., Chu and Majumdar, 2012; Bryant, 2007; Orr, 2004; Hepple and Benson, 2005; Bachu, 2003; Grimston et al., 2001). While CO2 can be sequestered in oceanic or terrestrial biomass, the most mature and effective technology currently available is sequestration in geologic formations, especially in known hydrocarbon reservoirs (Barrufet et al., 2010; Hepple and Benson, 2005). However, challenges in the design and implementation of sequestration projects remain, especially over long time scales. One problem is that the tendency for gravity override caused by the low density and viscosity of CO2. In the presence of subsurface heterogeneity, fractures and faults, there is a significant risk of CO2 leakage from the sequestration site into overlying rock compared to other liquid wastes (Hesse and Woods, 2010; Ennis-King and Patterson, 2002; Tsang et al., 2002). Furthermore, the CO2 will likely interact chemically with the rock in which it is stored, so that understanding and predicting its transport behavior during sequestration can be complex and difficult (Mandalaparty et al., 2011; Pruess et al., 2003). Leakage of CO2 can lead to such problems as acidification of ground water and killing of plant life, in addition to contamination of the atmosphere (Ha-Duong, 2003; Gasda et al., 2004). The development of adequate policies and regulatory systems to govern sequestration therefore requires improved characterization of the media in which CO2 is stored and the development of advanced methods for detecting and monitoring its flow and transport in the subsurface (Bachu, 2003).

  16. Evaluation of stress and saturation effects on seismic velocity and electrical resistivity - laboratory testing of rock samples

    Science.gov (United States)

    Vilhelm, Jan; Jirků, Jaroslav; Slavík, Lubomír; Bárta, Jaroslav

    2016-04-01

    Repository, located in a deep geological formation, is today considered the most suitable solution for disposal of spent nuclear fuel and high-level waste. The geological formations, in combination with an engineered barrier system, should ensure isolation of the waste from the environment for thousands of years. For long-term monitoring of such underground excavations special monitoring systems are developed. In our research we developed and tested monitoring system based on repeated ultrasonic time of flight measurement and electrical resistivity tomography (ERT). As a test site Bedřichov gallery in the northern Bohemia was selected. This underground gallery in granitic rock was excavated using Tunnel Boring Machine (TBM). The seismic high-frequency measurements are performed by pulse-transmission technique directly on the rock wall using one seismic source and three receivers in the distances of 1, 2 and 3 m. The ERT measurement is performed also on the rock wall using 48 electrodes. The spacing between electrodes is 20 centimeters. An analysis of relation of seismic velocity and electrical resistivity on water saturation and stress state of the granitic rock is necessary for the interpretation of both seismic monitoring and ERT. Laboratory seismic and resistivity measurements were performed. One series of experiments was based on uniaxial loading of dry and saturated granitic samples. The relation between stress state and ultrasonic wave velocities was tested separately for dry and saturated rock samples. Other experiments were focused on the relation between electrical resistivity of the rock sample and its saturation level. Rock samples with different porosities were tested. Acknowledgments: This work was partially supported by the Technology Agency of the Czech Republic, project No. TA 0302408

  17. Estimation of soil hydraulic parameters in the field by integrated hydrogeophysical inversion of time-lapse ground-penetrating radar data

    KAUST Repository

    Jadoon, Khan; Weihermü ller, Lutz; Scharnagl, Benedikt; Kowalsky, Michael B.; Bechtold, Michel; Hubbard, Susan S.; Vereecken, Harry; Lambot, Sé bastien

    2012-01-01

    An integrated hydrogeophysical inversion approach was used to remotely infer the unsaturated soil hydraulic parameters from time-lapse ground-penetrating radar (GPR) data collected at a fixed location over a bare agricultural field. The GPR model

  18. Seismic Technology Adapted to Analyzing and Developing Geothermal Systems Below Surface-Exposed High-Velocity Rocks Final Report

    Energy Technology Data Exchange (ETDEWEB)

    Hardage, Bob A. [Univ. of Texas, Austin, TX (United States). Bureau of Economic Geology; DeAngelo, Michael V. [Univ. of Texas, Austin, TX (United States). Bureau of Economic Geology; Ermolaeva, Elena [Univ. of Texas, Austin, TX (United States). Bureau of Economic Geology; Hardage, Bob A. [Univ. of Texas, Austin, TX (United States). Bureau of Economic Geology; Remington, Randy [Univ. of Texas, Austin, TX (United States). Bureau of Economic Geology; Sava, Diana [Univ. of Texas, Austin, TX (United States). Bureau of Economic Geology; Wagner, Donald [Univ. of Texas, Austin, TX (United States). Bureau of Economic Geology; Wei, Shuijion [Univ. of Texas, Austin, TX (United States). Bureau of Economic Geology

    2013-02-01

    The objective of our research was to develop and demonstrate seismic data-acquisition and data-processing technologies that allow geothermal prospects below high-velocity rock outcrops to be evaluated. To do this, we acquired a 3-component seismic test line across an area of exposed high-velocity rocks in Brewster County, Texas, where there is high heat flow and surface conditions mimic those found at numerous geothermal prospects. Seismic contractors have not succeeded in creating good-quality seismic data in this area for companies who have acquired data for oil and gas exploitation purposes. Our test profile traversed an area where high-velocity rocks and low-velocity sediment were exposed on the surface in alternating patterns that repeated along the test line. We verified that these surface conditions cause non-ending reverberations of Love waves, Rayleigh waves, and shallow critical refractions to travel across the earth surface between the boundaries of the fast-velocity and slow-velocity material exposed on the surface. These reverberating surface waves form the high level of noise in this area that does not allow reflections from deep interfaces to be seen and utilized. Our data-acquisition method of deploying a box array of closely spaced geophones allowed us to recognize and evaluate these surface-wave noise modes regardless of the azimuth direction to the surface anomaly that backscattered the waves and caused them to return to the test-line profile. With this knowledge of the surface-wave noise, we were able to process these test-line data to create P-P and SH-SH images that were superior to those produced by a skilled seismic data-processing contractor. Compared to the P-P data acquired along the test line, the SH-SH data provided a better detection of faults and could be used to trace these faults upward to the boundaries of exposed surface rocks. We expanded our comparison of the relative value of S-wave and P-wave seismic data for geothermal

  19. Effect of time lapse on the diagnostic accuracy of cone beam computed tomography for detection of vertical root fractures

    Energy Technology Data Exchange (ETDEWEB)

    Eskandarloo, Amir; Shokri, Abbas, E-mail: Dr.a.shokri@gmail.com [Dental Research Center, Department of Oral and Maxillofacial Radiology, Hamadan University of Medical Sciences, Hamadan (Iran, Islamic Republic of); Asl, Amin Mahdavi [Department of Oral and Maxillofacial Radiology, Golestan University of Medical Sciences, Gorgan (Iran, Islamic Republic of); Jalalzadeh, Mohsen [Department of Endodontics, Hamadan University of Medical Sciences, Hamadan (Iran, Islamic Republic of); Tayari, Maryam [Department of Pedodontics, Golestan University of Medical Sciences, Gorgan (Iran, Islamic Republic of); Hosseinipanah, Mohammad [Department of Anatomy, School of Medicine, Hamadan University of Medical Sciences, Hamadan (Iran, Islamic Republic of); Fardmal, Javad [Research Center for Health Sciences and Department of Epidemiology and Biostatistics, School of Public Health, Hamadan University of Medical Sciences, Hamadan (Iran, Islamic Republic of)

    2016-01-15

    Accurate and early diagnosis of vertical root fractures (VRFs) is imperative to prevent extensive bone loss and unnecessary endodontic and prosthodontic treatments. The aim of this study was to assess the effect of time lapse on the diagnostic accuracy of cone beam computed tomography (CBCT) for VRFs in endodontically treated dog’s teeth. Forty eight incisors and premolars of three adult male dogs underwent root canal therapy. The teeth were assigned to two groups: VRFs were artificially induced in the first group (n=24) while the teeth in the second group remained intact (n=24). The CBCT scans were obtained by NewTom 3G unit immediately after inducing VRFs and after one, two, three, four, eight, 12 and 16 weeks. Three oral and maxillofacial radiologists blinded to the date of radiographs assessed the presence/absence of VRFs on CBCT scans. The sensitivity, specificity and accuracy values were calculated and data were analyzed using SPSS v.16 software and ANOVA. The total accuracy of detection of VRFs immediately after surgery, one, two, three, four, eight, 12 and 16 weeks was 67.3%, 68.7%, 66.6%, 64.6%, 64.5%, 69.4%, 68.7%, 68% respectively. The effect of time lapse on detection of VRFs was not significant (p>0.05). Overall sensitivity, specificity and accuracy of CBCT for detection of VRFs were 74.3%, 62.2%, 67.2% respectively. Cone beam computed tomography is a valuable tool for detection of VRFs. Time lapse (four months) had no effect on detection of VRFs on CBCT scans. (author)

  20. Near real-time imaging of molasses injections using time-lapse electrical geophysics at the Brandywine DRMO, Brandywine, Maryland

    Science.gov (United States)

    Versteeg, R. J.; Johnson, T.; Major, B.; Day-Lewis, F. D.; Lane, J. W.

    2010-12-01

    Enhanced bioremediation, which involves introduction of amendments to promote biodegradation, increasingly is used to accelerate cleanup of recalcitrant compounds and has been identified as the preferred remedial treatment at many contaminated sites. Although blind introduction of amendments can lead to sub-optimal or ineffective remediation, the distribution of amendment throughout the treatment zone is difficult to measure using conventional sampling. Because amendments and their degradation products commonly have electrical properties that differ from those of ambient soil, time-lapse electrical geophysical monitoring has the potential to verify amendment emplacement and distribution. In order for geophysical monitoring to be useful, however, results of the injection ideally should be accessible in near real time. In August 2010, we demonstrated the feasibility of near real-time, autonomous electrical geophysical monitoring of amendment injections at the former Defense Reutilization and Marketing Office (DRMO) in Brandywine, Maryland. Two injections of about 1000 gallons each of molasses, a widely used amendment for enhanced bioremediation, were monitored using measurements taken with borehole and surface electrodes. During the injections, multi-channel resistance data were recorded; data were transmitted to a server and processed using a parallel resistivity inversion code; and results in the form of time-lapse imagery subsequently were posted to a website. This process occurred automatically without human intervention. The resulting time-lapse imagery clearly showed the evolution of the molasses plume. The delay between measurements and online delivery of images was between 45 and 60 minutes, thus providing actionable information that could support decisions about field procedures and a check on whether amendment reached target zones. This experiment demonstrates the feasibility of using electrical imaging as a monitoring tool both during amendment emplacement

  1. Spatiotemporal monitoring of soil water content profiles in an irrigated field using probabilistic inversion of time-lapse EMI data

    KAUST Repository

    Moghadas, Davood

    2017-10-17

    Monitoring spatiotemporal variations of soil water content (θ) is important across a range of research fields, including agricultural engineering, hydrology, meteorology and climatology. Low frequency electromagnetic induction (EMI) systems have proven to be useful tools in mapping soil apparent electrical conductivity (σa) and soil moisture. However, obtaining depth profile water content is an area that has not been fully explored using EMI. To examine this, we performed time-lapse EMI measurements using a CMD mini-Explorer sensor along a 10 m transect of a maize field over a 6 day period. Reference data were measured at the end of the profile via an excavated pit using 5TE capacitance sensors. In order to derive a time-lapse, depth-specific subsurface image of electrical conductivity (σ), we applied a probabilistic sampling approach, DREAM(ZS), on the measured EMI data. The inversely estimated σ values were subsequently converted to θ using the Rhoades et al. (1976) petrophysical relationship. The uncertainties in measured σa, as well as inaccuracies in the inverted data, introduced some discrepancies between estimated σ and reference values in time and space. Moreover, the disparity between the measurement footprints of the 5TE and CMD Mini-Explorer sensors also led to differences. The obtained θ permitted an accurate monitoring of the spatiotemporal distribution and variation of soil water content due to root water uptake and evaporation. The proposed EMI measurement and modeling technique also allowed for detecting temporal root zone soil moisture variations. The time-lapse θ monitoring approach developed using DREAM(ZS) thus appears to be a useful technique to understand spatiotemporal patterns of soil water content and provide insights into linked soil moisture vegetation processes and the dynamics of soil moisture/infiltration processes.

  2. Spatiotemporal monitoring of soil water content profiles in an irrigated field using probabilistic inversion of time-lapse EMI data

    Science.gov (United States)

    Moghadas, Davood; Jadoon, Khan Zaib; McCabe, Matthew F.

    2017-12-01

    Monitoring spatiotemporal variations of soil water content (θ) is important across a range of research fields, including agricultural engineering, hydrology, meteorology and climatology. Low frequency electromagnetic induction (EMI) systems have proven to be useful tools in mapping soil apparent electrical conductivity (σa) and soil moisture. However, obtaining depth profile water content is an area that has not been fully explored using EMI. To examine this, we performed time-lapse EMI measurements using a CMD mini-Explorer sensor along a 10 m transect of a maize field over a 6 day period. Reference data were measured at the end of the profile via an excavated pit using 5TE capacitance sensors. In order to derive a time-lapse, depth-specific subsurface image of electrical conductivity (σ), we applied a probabilistic sampling approach, DREAM(ZS) , on the measured EMI data. The inversely estimated σ values were subsequently converted to θ using the Rhoades et al. (1976) petrophysical relationship. The uncertainties in measured σa, as well as inaccuracies in the inverted data, introduced some discrepancies between estimated σ and reference values in time and space. Moreover, the disparity between the measurement footprints of the 5TE and CMD Mini-Explorer sensors also led to differences. The obtained θ permitted an accurate monitoring of the spatiotemporal distribution and variation of soil water content due to root water uptake and evaporation. The proposed EMI measurement and modeling technique also allowed for detecting temporal root zone soil moisture variations. The time-lapse θ monitoring approach developed using DREAM(ZS) thus appears to be a useful technique to understand spatiotemporal patterns of soil water content and provide insights into linked soil moisture vegetation processes and the dynamics of soil moisture/infiltration processes.

  3. Effect of time lapse on the diagnostic accuracy of cone beam computed tomography for detection of vertical root fractures

    International Nuclear Information System (INIS)

    Eskandarloo, Amir; Shokri, Abbas; Asl, Amin Mahdavi; Jalalzadeh, Mohsen; Tayari, Maryam; Hosseinipanah, Mohammad; Fardmal, Javad

    2016-01-01

    Accurate and early diagnosis of vertical root fractures (VRFs) is imperative to prevent extensive bone loss and unnecessary endodontic and prosthodontic treatments. The aim of this study was to assess the effect of time lapse on the diagnostic accuracy of cone beam computed tomography (CBCT) for VRFs in endodontically treated dog’s teeth. Forty eight incisors and premolars of three adult male dogs underwent root canal therapy. The teeth were assigned to two groups: VRFs were artificially induced in the first group (n=24) while the teeth in the second group remained intact (n=24). The CBCT scans were obtained by NewTom 3G unit immediately after inducing VRFs and after one, two, three, four, eight, 12 and 16 weeks. Three oral and maxillofacial radiologists blinded to the date of radiographs assessed the presence/absence of VRFs on CBCT scans. The sensitivity, specificity and accuracy values were calculated and data were analyzed using SPSS v.16 software and ANOVA. The total accuracy of detection of VRFs immediately after surgery, one, two, three, four, eight, 12 and 16 weeks was 67.3%, 68.7%, 66.6%, 64.6%, 64.5%, 69.4%, 68.7%, 68% respectively. The effect of time lapse on detection of VRFs was not significant (p>0.05). Overall sensitivity, specificity and accuracy of CBCT for detection of VRFs were 74.3%, 62.2%, 67.2% respectively. Cone beam computed tomography is a valuable tool for detection of VRFs. Time lapse (four months) had no effect on detection of VRFs on CBCT scans. (author)

  4. Spatiotemporal monitoring of soil water content profiles in an irrigated field using probabilistic inversion of time-lapse EMI data

    KAUST Repository

    Moghadas, Davood; Jadoon, Khan Zaib; McCabe, Matthew

    2017-01-01

    Monitoring spatiotemporal variations of soil water content (θ) is important across a range of research fields, including agricultural engineering, hydrology, meteorology and climatology. Low frequency electromagnetic induction (EMI) systems have proven to be useful tools in mapping soil apparent electrical conductivity (σa) and soil moisture. However, obtaining depth profile water content is an area that has not been fully explored using EMI. To examine this, we performed time-lapse EMI measurements using a CMD mini-Explorer sensor along a 10 m transect of a maize field over a 6 day period. Reference data were measured at the end of the profile via an excavated pit using 5TE capacitance sensors. In order to derive a time-lapse, depth-specific subsurface image of electrical conductivity (σ), we applied a probabilistic sampling approach, DREAM(ZS), on the measured EMI data. The inversely estimated σ values were subsequently converted to θ using the Rhoades et al. (1976) petrophysical relationship. The uncertainties in measured σa, as well as inaccuracies in the inverted data, introduced some discrepancies between estimated σ and reference values in time and space. Moreover, the disparity between the measurement footprints of the 5TE and CMD Mini-Explorer sensors also led to differences. The obtained θ permitted an accurate monitoring of the spatiotemporal distribution and variation of soil water content due to root water uptake and evaporation. The proposed EMI measurement and modeling technique also allowed for detecting temporal root zone soil moisture variations. The time-lapse θ monitoring approach developed using DREAM(ZS) thus appears to be a useful technique to understand spatiotemporal patterns of soil water content and provide insights into linked soil moisture vegetation processes and the dynamics of soil moisture/infiltration processes.

  5. Analysis of Zebrafish Kidney Development with Time-lapse Imaging Using a Dissecting Microscope Equipped for Optical Sectioning.

    Science.gov (United States)

    Perner, Birgit; Schnerwitzki, Danny; Graf, Michael; Englert, Christoph

    2016-04-07

    In order to understand organogenesis, the spatial and temporal alterations that occur during development of tissues need to be recorded. The method described here allows time-lapse analysis of normal and impaired kidney development in zebrafish embryos by using a fluorescence dissecting microscope equipped for structured illumination and z-stack acquisition. To visualize nephrogenesis, transgenic zebrafish (Tg(wt1b:GFP)) with fluorescently labeled kidney structures were used. Renal defects were triggered by injection of an antisense morpholino oligonucleotide against the Wilms tumor gene wt1a, a factor known to be crucial for kidney development. The advantage of the experimental setup is the combination of a zoom microscope with simple strategies for re-adjusting movements in x, y or z direction without additional equipment. To circumvent focal drift that is induced by temperature variations and mechanical vibrations, an autofocus strategy was applied instead of utilizing a usually required environmental chamber. In order to re-adjust the positional changes due to a xy-drift, imaging chambers with imprinted relocation grids were employed. In comparison to more complex setups for time-lapse recording with optical sectioning such as confocal laser scanning or light sheet microscopes, a zoom microscope is easy to handle. Besides, it offers dissecting microscope-specific benefits such as high depth of field and an extended working distance. The method to study organogenesis presented here can also be used with fluorescence stereo microscopes not capable of optical sectioning. Although limited for high-throughput, this technique offers an alternative to more complex equipment that is normally used for time-lapse recording of developing tissues and organ dynamics.

  6. The Potential Impact of Biofield Treatment on Human Brain Tumor Cells: A Time-Lapse Video Microscopy

    OpenAIRE

    Trivedi, Mahendra

    2015-01-01

    Study background: Glioblastoma (GBM) is the most common subtype of primary brain tumor in adults. The aim was to evaluate the impact of biofield treatment potential on human GBM and non-GBM brain cells using two time-lapse video microscopy technique. Methods: The human brain tumor, GBM cultured cells were divided into two groups viz. GBM control and GBM treatment. Similarly, human normal brain cultured cells (non-GBM) were taken and divided into two groups viz. non- GBM control and non-GB...

  7. 3D time-lapse analysis of Rab11/FIP5 complex: spatiotemporal dynamics during apical lumen formation.

    Science.gov (United States)

    Mangan, Anthony; Prekeris, Rytis

    2015-01-01

    Fluorescent imaging of fixed cells grown in two-dimensional (2D) cultures is one of the most widely used techniques for observing protein localization and distribution within cells. Although this technique can also be applied to polarized epithelial cells that form three-dimensional (3D) cysts when grown in a Matrigel matrix suspension, there are still significant limitations in imaging cells fixed at a particular point in time. Here, we describe the use of 3D time-lapse imaging of live cells to observe the dynamics of apical membrane initiation site (AMIS) formation and lumen expansion in polarized epithelial cells.

  8. Accessing the uncertainties of seismic velocity and anisotropy structure of Northern Great Plains using a transdimensional Bayesian approach

    Science.gov (United States)

    Gao, C.; Lekic, V.

    2017-12-01

    Seismic imaging utilizing complementary seismic data provides unique insight on the formation, evolution and current structure of continental lithosphere. While numerous efforts have improved the resolution of seismic structure, the quantification of uncertainties remains challenging due to the non-linearity and the non-uniqueness of geophysical inverse problem. In this project, we use a reverse jump Markov chain Monte Carlo (rjMcMC) algorithm to incorporate seismic observables including Rayleigh and Love wave dispersion, Ps and Sp receiver function to invert for shear velocity (Vs), compressional velocity (Vp), density, and radial anisotropy of the lithospheric structure. The Bayesian nature and the transdimensionality of this approach allow the quantification of the model parameter uncertainties while keeping the models parsimonious. Both synthetic test and inversion of actual data for Ps and Sp receiver functions are performed. We quantify the information gained in different inversions by calculating the Kullback-Leibler divergence. Furthermore, we explore the ability of Rayleigh and Love wave dispersion data to constrain radial anisotropy. We show that when multiple types of model parameters (Vsv, Vsh, and Vp) are inverted simultaneously, the constraints on radial anisotropy are limited by relatively large data uncertainties and trade-off strongly with Vp. We then perform joint inversion of the surface wave dispersion (SWD) and Ps, Sp receiver functions, and show that the constraints on both isotropic Vs and radial anisotropy are significantly improved. To achieve faster convergence of the rjMcMC, we propose a progressive inclusion scheme, and invert SWD measurements and receiver functions from about 400 USArray stations in the Northern Great Plains. We start by only using SWD data due to its fast convergence rate. We then use the average of the ensemble as a starting model for the joint inversion, which is able to resolve distinct seismic signatures of

  9. 2D Seismic Velocity Modelling in the Southeastern Romanian Carpathians and its Foreland (Vrancea Zone and Focsani Basin)

    Science.gov (United States)

    Stephenson, R.; Bocin, A.; Tryggvason, A.

    2003-12-01

    The DACIA-PLAN (Danube and Carpathian Integrated Action on Processes in the Lithosphere and Neotectonics) deep seismic reflection survey was performed in August-September 2001, with the objective of obtaining of new information on the deep structure of the external Carpathians nappes and the architecture of Tertiary/Quaternary basins developed within and adjacent to the seismically-active Vrancea Zone, including the rapidly subsiding Focsani Basin. The DACIA-PLAN profile is about 140 km long, having a roughly NW-SE direction, from near the southeast Transylvanian Basin, across the mountainous southeastern Carpathians and their foreland to near the Danube Dalta. A high resolution 2D velocity model of the upper crust along the seismic profile has been determined from a first-arrival tomographic inversion of the DACIA-PLAN data. The shallowing of Palaeozoic-Mesozoic basement, and related structural heterogeneity within it, beneath the eastern flank of the Focsani Basin is clearly seen. Velocity heterogeneity within the Carpathian nappe belt is also evident and is indicative of internal structural complexity, including the presence of salt bodies and basement involvement in thrusting, thus favouring some current geological models over others. The presence of basement involvement implies the compressional reactivation of pre-existing basement normal faults. Members of the DACIA-PLAN/TomoSeis Working Group (see poster) should be considered as co-authors of this presentation.

  10. Construction method and application of 3D velocity model for evaluation of strong seismic motion and its cost performance

    International Nuclear Information System (INIS)

    Matsuyama, Hisanori; Fujiwara, Hiroyuki

    2014-01-01

    Based on experiences of making subsurface structure models for seismic strong motion evaluation, the advantages and disadvantages in terms of convenience and cost for several methods used to make such models were reported. As for the details, gravity and micro-tremor surveys were considered to be highly valid in terms of convenience and cost. However, stratigraphy and seismic velocity structure are required to make accurate 3-D subsurface structures. To realize these, methods for directly examining subsurface ground or using controlled tremor sources (at high cost) are needed. As a result, it was summarized that in modeling subsurface structures, some sort of plan including both types of methods is desirable and that several methods must be combined to match one's intended purposes and budget. (authors)

  11. Determination of residual oil saturation from time-lapse pulsed neutron capture logs in a large sandstone reservoir

    International Nuclear Information System (INIS)

    Syed, E.V.; Salaita, G.N.; McCaffery, F.G.

    1991-01-01

    Cased hole logging with pulsed neutron tools finds extensive use for identifying zones of water breakthrough and monitoring oil-water contacts in oil reservoirs being depleted by waterflooding or natural water drive. Results of such surveys then find direct use for planning recompletions and water shutoff treatments. Pulsed neutron capture (PNC) logs are useful for estimating water saturation changes behind casing in the presence of a constant, high-salinity environment. PNC log surveys run at different times, i.e., in a time-lapse mode, are particularly amenable to quantitative analysis. The combined use of the original open hole and PNC time-lapse log information can then provide information on remaining or residual oil saturations in a reservoir. This paper reports analyses of historical pulsed neutron capture log data to assess residual oil saturation in naturally water-swept zones for selected wells from a large sandstone reservoir in the Middle East. Quantitative determination of oil saturations was aided by PNC log information obtained from a series of tests conducted in a new well in the same field

  12. MitoGen: A Framework for Generating 3D Synthetic Time-Lapse Sequences of Cell Populations in Fluorescence Microscopy.

    Science.gov (United States)

    Svoboda, David; Ulman, Vladimir

    2017-01-01

    The proper analysis of biological microscopy images is an important and complex task. Therefore, it requires verification of all steps involved in the process, including image segmentation and tracking algorithms. It is generally better to verify algorithms with computer-generated ground truth datasets, which, compared to manually annotated data, nowadays have reached high quality and can be produced in large quantities even for 3D time-lapse image sequences. Here, we propose a novel framework, called MitoGen, which is capable of generating ground truth datasets with fully 3D time-lapse sequences of synthetic fluorescence-stained cell populations. MitoGen shows biologically justified cell motility, shape and texture changes as well as cell divisions. Standard fluorescence microscopy phenomena such as photobleaching, blur with real point spread function (PSF), and several types of noise, are simulated to obtain realistic images. The MitoGen framework is scalable in both space and time. MitoGen generates visually plausible data that shows good agreement with real data in terms of image descriptors and mean square displacement (MSD) trajectory analysis. Additionally, it is also shown in this paper that four publicly available segmentation and tracking algorithms exhibit similar performance on both real and MitoGen-generated data. The implementation of MitoGen is freely available.

  13. Estimation of soil hydraulic parameters by integrated hydrogeophysical inversion of time-lapse GPR data measured at Selhausen, Germany

    KAUST Repository

    Jadoon, Khan

    2012-06-01

    We present an integrated hydrogeophysical inversion approach that uses time-lapse off-ground ground-penetrating radar (GPR) data to estimate soil hydraulic parameters, and apply it to a dataset collected in the field. Off-ground GPR data are mainly sensitive to the near-surface water content profile and dynamics, and are thus related to soil hydraulic parameters, such as the parameters of the hydraulic conductivity and water retention functions. The hydrological simulator HYDRUS 1-D was used with a two-layer single- and dual-porosity model. To monitor the soil water content dynamics, time-lapse GPR and time domain reflectometry (TDR) measurements were performed, whereby only GPR data was used in the inversion. The dual porosity model provided better results compared to the single porosity model for describing the soil water dynamics, which is supported by field observations of macropores. Furthermore, the GPR-derived water content profiles reconstructed from the integrated hydrogeophysical inversion were in good agreement with TDR observations. These results suggest that the proposed method is promising for non-invasive characterization of the shallow subsurface hydraulic properties and monitoring water dynamics at the field scale.

  14. A comparison of the cytotoxic activity of eosinophils and other cells by 51chromium release and time lapse microcinematography

    International Nuclear Information System (INIS)

    Sanderson, C.J.; Thomas, J.A.

    1978-01-01

    Antibody dependent cytotoxicity of chicken erythrocytes by purified rat eosinophils, neutrophils, macrophages and K cells has been compared by 51 Cr release and time lapse microcinematography. Techniques have been developed for purifying these effector cell types. Both eosinophils and neutrophils caused rapid release of 51 Cr from erythrocytes. Time lapse observations indicated that this was the result of phagocytosis. Eosinophils showed rapid membrane movement and repeatedly engulfed and regurgitated the erythrocytes. On the other hand, neutrophils became quiescent after phagocytosing erythrocytes, and remained quiescent until the remains of the cell were expelled. Neutrophils presumably have a mechanism for the release of soluble material, as 51 Cr was released rapidly. Macrophages showed a similar quiescence after phagocytosis, but in these cells there was apparently no rapid mechanism to expel material, as there was no significant 51 Cr release over 20 h. K cells appeared to damage chicken erythrocytes more slowly than they destroyed tumour cells. Mast cells caused antibody-independent cytotoxicity which can be attributed to the release of toxic materials. None of these effector cells produced the type of lysis seen with antibody and complement. (author)

  15. Estimation of seismic velocity in the subducting crust of the Pacific slab beneath Hokkaido, northern Japan by using guided waves

    Science.gov (United States)

    Shiina, T.; Nakajima, J.; Toyokuni, G.; Kita, S.; Matsuzawa, T.

    2014-12-01

    A subducting crust contains a large amount of water as a form of hydrous minerals (e.g., Hacker et al., 2003), and the crust plays important roles for water transportation and seismogenesis in subduction zones at intermediate depths (e.g., Kirby et al., 1996; Iwamori, 2007). Therefore, the investigation of seismic structure in the crust is important to understand ongoing physical processes with subduction of oceanic lithosphere. A guided wave which propagates in the subducting crust is recorded in seismograms at Hokkaido, northern Japan (Shiina et al., 2014). Here, we estimated P- and S-wave velocity in the crust with guided waves, and obtained P-wave velocity of 6.6-7.3 km/s and S-wave velocity of 3.6-4.2 km/s at depths of 50-90 km. Moreover, Vp/Vs ratio in the crust is calculated to be 1.80-1.85 in that depth range. The obtained P-wave velocity about 6.6km/s at depths of 50-70 km is consistent with those estimated in Tohoku, northeast Japan (Shiina et al., 2013), and this the P-wave velocity is lower than those expected from models of subducting crustal compositions, such as metamorphosed MORB model (Hacker et al., 2003). In contrast, at greater depths (>80 km), the P-wave velocity marks higher velocity than the case of NE Japan and the velocity is roughly comparable to those of the MORB model. The obtained S-wave velocity distribution also shows characteristics similar to P waves. This regional variation may be caused by a small variation in thermal regime of the Pacific slab beneath the two regions as a result of the normal subduction in Tohoku and oblique subduction in Hokkaido. In addition, the effect of seismic anisotropy in the subducting crust would not be ruled out because rays used in the analysis in Hokkaido propagate mostly in the trench-parallel direction, while those in Tohoku are sufficiently criss-crossed.

  16. Low Velocity Seismic Waves Produced by Stick-Slip Processes During the Drainage of Two Supraglacial Lakes in Greenland

    Science.gov (United States)

    Kenyon, P. M.; Orantes, E. J.; Grynewize, S.; Tedesco, M.

    2016-12-01

    The drainage of supraglacial lakes over the Greenland ice sheet has been shown to have a significant impact on ice dynamics and subglacial hydrology. As supraglacial lakes drain, they produce seismic waves that can be detected on both local and regional scales. Studying such waves and the originating phenomena has the potential to advance our understanding of the subglacial processes involved. Here we present the results of an analysis of high frequency seismic waves generated during the drainage of two supraglacial lakes in southwestern Greenland. The two lakes drained by contrasting mechanisms. One (Lake Half Moon) drained slowly by overflow into an existing moulin. Here GPS data, recorded during the drainage, show an increase in ice sheet velocity that begins well before the time of maximum lake depth. The other lake (Lake Ponting) drained suddenly by hydrofracture through the lake bed. In this case, the GPS data show an increase in velocity that is essentially simultaneous with the maximum lake depth. In both cases, vertical component seismograms were obtained from the Greenland Ice Sheet Monitoring Network (GLISN) for several hours before and after the lake drainage. Arrival times were picked manually, using the criterion that an arrival must have a minimum amplitude of twice the noise level. The arrivals were then plotted on graphs of time versus distance from the lake in question. Several linear trends are visible on each graph. The velocities calculated from the slopes of these trends are unexpectedly low. We suggest that one explanation for this might be that the waves are traveling in a layer of till at the base of the ice sheet, that forms a low velocity channel. When compared with GPS and lake depth data, the origin times of the waves coincide with the velocity increase in both cases. Therefore, we conclude that the waves are being generated by stick-slip processes involving the slippage of the ice sheet on an underlying layer of till.

  17. Seismic Velocity Structure and Depth-Dependence of Anisotropy in the Red Sea and Arabian Shield from Surface Wave Analysis

    Energy Technology Data Exchange (ETDEWEB)

    Hansen, S; Gaherty, J; Schwartz, S; Rodgers, A; Al-Amri, A

    2007-07-25

    We investigate the lithospheric and upper mantle structure as well as the depth-dependence of anisotropy along the Red Sea and beneath the Arabian Peninsula using receiver function constraints and phase velocities of surface waves traversing two transects of stations from the Saudi Arabian National Digital Seismic Network. Frequency-dependent phase delays of fundamental-mode Love and Rayleigh waves, measured using a cross-correlation procedure, require very slow shear velocities and the presence of anisotropy throughout the upper mantle. Linearized inversion of these data produce path-averaged 1D radially anisotropic models with about 4% anisotropy in the lithosphere, increasing to about 4.8% anisotropy across the lithosphere-asthenosphere boundary (LAB). Models with reasonable crustal velocities in which the mantle lithosphere is isotropic cannot satisfy the data. The lithospheric lid, which ranges in thickness from about 70 km near the Red Sea coast to about 90 km beneath the Arabian Shield, is underlain by a pronounced low-velocity zone with shear velocities as low as 4.1 km/s. Forward models, which are constructed from previously determined shear-wave splitting estimates, can reconcile surface and body wave observations of anisotropy. The low shear velocity values are similar to many other continental rift and oceanic ridge environments. These low velocities combined with the sharp velocity contrast across the LAB may indicate the presence of partial melt beneath Arabia. The anisotropic signature primarily reflects a combination of plate- and density-driven flow associated with active rifting processes in the Red Sea.

  18. Sound velocities of the 23 Å phase at high pressure and implications for seismic velocities in subducted slabs

    Science.gov (United States)

    Cai, N.; Chen, T.; Qi, X.; Inoue, T.; Li, B.

    2017-12-01

    Dense hydrous phases are believed to play an important role in transporting water back into the deep interior of the Earth. Recently, a new Al-bearing hydrous Mg-silicate, named the 23 Å phase (ideal composition Mg12Al2Si4O16(OH)14), was reported (Cai et al., 2015), which could be a very important hydrous phase in subducting slabs. Here for the first time we report the measurements of the compressional and shear wave velocities of the 23 Å phase under applied pressures up to 14 GPa and room temperature, using a bulk sample with a grain size of less than 20 μm and density of 2.947 g/cm3. The acoustic measurements were conducted in a 1000-ton uniaxial split-cylinder multi-anvil apparatus using ultrasonic interferometry techniques (Li et al., 1996). The pressures were determined in situ by using an alumina buffer rod as the pressure marker (Wang et al., 2015). A dual-mode piezoelectric transducer enabled us to measure P and S wave travel times simultaneously, which in turn allowed a precise determination of the sound velocities and elastic bulk and shear moduli at high pressures. A fit to the acoustic data using finite strain analysis combined with a Hashin-Shtrikman (HS) bounds calculation yields: Ks0 = 113.3 GPa, G0 = 42.8 GPa, and K' = 3.8, G' = 1.9 for the bulk and shear moduli and their pressure derivatives. The velocities (especially for S wave) of this 23 Å phase (ambient Vp = 7.53 km/s, Vs = 3.72 km/s) are lower than those of phase A, olivine, pyrope, etc., while the Vp/Vs ratio (from 2.02 to 1.94, decreasing with increasing pressure) is quite high. These results suggest that a hydrous assemblage containing 23 Å phase should be distinguishable from a dry one at high pressure and temperature conditions relevant to Al-bearing subducted slabs.

  19. Changes in seismic velocity during the first 14 months of the 2004–2008 eruption of Mount St. Helens, Washington

    Science.gov (United States)

    Hotovec-Ellis, A.J.; Vidale, J.E.; Gomberg, Joan S.; Thelen, Weston A.; Moran, Seth C.

    2015-01-01

    Mount St. Helens began erupting in late 2004 following an 18 year quiescence. Swarms of repeating earthquakes accompanied the extrusion of a mostly solid dacite dome over the next 4 years. In some cases the waveforms from these earthquakes evolved slowly, likely reflecting changes in the properties of the volcano that affect seismic wave propagation. We use coda-wave interferometry to quantify small changes in seismic velocity structure (usually <1%) between two similar earthquakes and employed waveforms from several hundred families of repeating earthquakes together to create a continuous function of velocity change observed at permanent stations operated within 20 km of the volcano. The high rate of earthquakes allowed tracking of velocity changes on an hourly time scale. Changes in velocity were largest near the newly extruding dome and likely related to shallow deformation as magma first worked its way to the surface. We found strong correlation between velocity changes and the inverse of real-time seismic amplitude measurements during the first 3 weeks of activity, suggesting that fluctuations of pressure in the shallow subsurface may have driven both seismicity and velocity changes. Velocity changes during the remainder of the eruption likely result from a complex interplay of multiple effects and are not well explained by any single factor alone, highlighting the need for complementary geophysical data when interpreting velocity changes.

  20. Characteristics of Offshore Hawai';i Island Seismicity and Velocity Structure, including Lo';ihi Submarine Volcano

    Science.gov (United States)

    Merz, D. K.; Caplan-Auerbach, J.; Thurber, C. H.

    2013-12-01

    The Island of Hawai';i is home to the most active volcanoes in the Hawaiian Islands. The island's isolated nature, combined with the lack of permanent offshore seismometers, creates difficulties in recording small magnitude earthquakes with accuracy. This background offshore seismicity is crucial in understanding the structure of the lithosphere around the island chain, the stresses on the lithosphere generated by the weight of the islands, and how the volcanoes interact with each other offshore. This study uses the data collected from a 9-month deployment of a temporary ocean bottom seismometer (OBS) network fully surrounding Lo';ihi volcano. This allowed us to widen the aperture of earthquake detection around the Big Island, lower the magnitude detection threshold, and better constrain the hypocentral depths of offshore seismicity that occurs between the OBS network and the Hawaii Volcano Observatory's land based network. Although this study occurred during a time of volcanic quiescence for Lo';ihi, it establishes a basis for background seismicity of the volcano. More than 480 earthquakes were located using the OBS network, incorporating data from the HVO network where possible. Here we present relocated hypocenters using the double-difference earthquake location algorithm HypoDD (Waldhauser & Ellsworth, 2000), as well as tomographic images for a 30 km square area around the summit of Lo';ihi. Illuminated by using the double-difference earthquake location algorithm HypoDD (Waldhauser & Ellsworth, 2000), offshore seismicity during this study is punctuated by events locating in the mantle fault zone 30-50km deep. These events reflect rupture on preexisting faults in the lower lithosphere caused by stresses induced by volcano loading and flexure of the Pacific Plate (Wolfe et al., 2004; Pritchard et al., 2007). Tomography was performed using the double-difference seismic tomography method TomoDD (Zhang & Thurber, 2003) and showed overall velocities to be slower than

  1. Highlights from the SoilCAM project: Soil Contamination, Advanced integrated characterisation and time-lapse Monitoring

    Science.gov (United States)

    French, H. K.; van der Zee, S. E. A. T. M.; Wehrer, M.; Godio, A.; Pedersen, L. B.; Toscano, G.

    2012-04-01

    The SoilCAM project (Soil Contamination, Advanced integrated characterisation and time-lapse Monitoring 2008-2012, EU-FP7-212663) is aimed at improving current methods for monitoring contaminant distribution and biodegradation in the subsurface. At two test sites, Oslo airport Gardermoen in Norway and the Trecate site in Italy, a number of geophysical techniques, lysimeter and other soil and water sampling techniques as well as numerical flow and transport modelling have been combined at different scales in order to characterise flow transport processes in the unsaturated and saturated zones. Laboratory experiments have provided data on physical and bio-geo-chemical parameters for use in models and to select remediation methods. The geophysical techniques were used to map geological heterogeneities and also conduct time-lapse measurements of processes in the unsaturated zone. Both cross borehole and surface electrodes were used for electrical resistivity and induced polarisation surveys. The geophysical surveys showed clear indications of areas highly affected by de-icing chemicals along the runway at Oslo airport. The time lapse measurements along the runway at the airport show infiltration patterns during snowmelt and are used to validate 2D unsaturated flow and transport simulations using SUTRA. The Orchestra model is used to describe the complex interaction between bio-geo-chemical processes in a 1D profile along the runway. The presence of installations such as a membrane along the runway highly affects the flow pattern and challenges the capacity of the numerical code. Smaller scale field site measurements have revealed the increase of iron and manganese during degradation of de-icing chemicals. The use of Nitrate to increase red-ox potential was tested, but results have not been analysed yet. So far it cannot be concluded that degradation process can be quantified indirectly by geophysical monitoring. At the Trecate site a combination of georadar, electrical

  2. Velocity structure and the role of fluids in the West Bohemia Seismic Zone

    Czech Academy of Sciences Publication Activity Database

    Alexandrakis, C.; Calò, M.; Bouchaala, F.; Vavryčuk, Václav

    2014-01-01

    Roč. 5, č. 2 (2014), s. 863-872 ISSN 1869-9510 R&D Projects: GA ČR(CZ) GAP210/12/1491 EU Projects: European Commission(XE) 230669 - AIM Institutional support: RVO:67985530 Keywords : seismic tomography * Bohemia/Vogtland seismoactive region * WEBNET Subject RIV: DC - Siesmology, Volcanology, Earth Structure Impact factor: 2.270, year: 2014

  3. Three-dimensional seismic velocity model of theWest Bohemia/Vogtland seismoactive region

    Czech Academy of Sciences Publication Activity Database

    Růžek, Bohuslav; Horálek, Josef

    2013-01-01

    Roč. 195, č. 2 (2013), s. 1251-1266 ISSN 0956-540X R&D Projects: GA ČR GAP210/12/2336; GA MŠk LM2010008 Institutional support: RVO:67985530 Keywords : controlled source seismology * body waves * seismic tomography * crustal structure Subject RIV: DC - Siesmology, Volcanology, Earth Structure Impact factor: 2.724, year: 2013

  4. Time-Lapse, in Situ Imaging of Ice Crystal Growth Using Confocal Microscopy.

    Science.gov (United States)

    Marcellini, Moreno; Noirjean, Cecile; Dedovets, Dmytro; Maria, Juliette; Deville, Sylvain

    2016-11-30

    Ice crystals nucleate and grow when a water solution is cooled below its freezing point. The growth velocities and morphologies of the ice crystals depend on many parameters, such as the temperature of ice growth, the melting temperature, and the interactions of solutes with the growing crystals. Three types of morphologies may appear: dendritic, cellular (or fingerlike), or the faceted equilibrium form. Understanding and controlling which type of morphology is formed is essential in several domains, from biology to geophysics and materials science. Obtaining, in situ, three dimensional observations without introducing artifacts due to the experimental technique is nevertheless challenging. Here we show how we can use laser scanning confocal microscopy to follow in real-time the growth of smoothed and faceted ice crystals in zirconium acetate solutions. Both qualitative and quantitative observations can be made. In particular, we can precisely measure the lateral growth velocity of the crystals, a measure otherwise difficult to obtain. Such observations should help us understand the influence of the parameters that control the growth of ice crystals in various systems.

  5. A Modular and Affordable Time-Lapse Imaging and Incubation System Based on 3D-Printed Parts, a Smartphone, and Off-The-Shelf Electronics.

    Science.gov (United States)

    Hernández Vera, Rodrigo; Schwan, Emil; Fatsis-Kavalopoulos, Nikos; Kreuger, Johan

    2016-01-01

    Time-lapse imaging is a powerful tool for studying cellular dynamics and cell behavior over long periods of time to acquire detailed functional information. However, commercially available time-lapse imaging systems are expensive and this has limited a broader implementation of this technique in low-resource environments. Further, the availability of time-lapse imaging systems often present workflow bottlenecks in well-funded institutions. To address these limitations we have designed a modular and affordable time-lapse imaging and incubation system (ATLIS). The ATLIS enables the transformation of simple inverted microscopes into live cell imaging systems using custom-designed 3D-printed parts, a smartphone, and off-the-shelf electronic components. We demonstrate that the ATLIS provides stable environmental conditions to support normal cell behavior during live imaging experiments in both traditional and evaporation-sensitive microfluidic cell culture systems. Thus, the system presented here has the potential to increase the accessibility of time-lapse microscopy of living cells for the wider research community.

  6. A Modular and Affordable Time-Lapse Imaging and Incubation System Based on 3D-Printed Parts, a Smartphone, and Off-The-Shelf Electronics

    Science.gov (United States)

    Schwan, Emil; Fatsis-Kavalopoulos, Nikos; Kreuger, Johan

    2016-01-01

    Time-lapse imaging is a powerful tool for studying cellular dynamics and cell behavior over long periods of time to acquire detailed functional information. However, commercially available time-lapse imaging systems are expensive and this has limited a broader implementation of this technique in low-resource environments. Further, the availability of time-lapse imaging systems often present workflow bottlenecks in well-funded institutions. To address these limitations we have designed a modular and affordable time-lapse imaging and incubation system (ATLIS). The ATLIS enables the transformation of simple inverted microscopes into live cell imaging systems using custom-designed 3D-printed parts, a smartphone, and off-the-shelf electronic components. We demonstrate that the ATLIS provides stable environmental conditions to support normal cell behavior during live imaging experiments in both traditional and evaporation-sensitive microfluidic cell culture systems. Thus, the system presented here has the potential to increase the accessibility of time-lapse microscopy of living cells for the wider research community. PMID:28002463

  7. Retrieval of sea surface velocities using sequential ocean colour monitor (OCM) data

    Digital Repository Service at National Institute of Oceanography (India)

    Prasad, J.S.; Rajawat, A.S.; Pradhan, Y.; Chauhan, O.S.; Nayak, S.R.

    velocities has been developed. The method is based on matching suspended sediment dispersion patterns, in sequential two time lapsed images. The pattern matching is performed on atmospherically corrected and geo-referenced sequential pair of images by Maximum...

  8. A time-lapse gravity survey of the Coso geothermal field, China Lake Naval Air Weapons Station, California

    Science.gov (United States)

    Phelps, Geoffrey; Cronkite-Ratcliff, Collin; Blake, Kelly

    2018-04-19

    We have conducted a gravity survey of the Coso geothermal field to continue the time-lapse gravity study of the area initiated in 1991. In this report, we outline a method of processing the gravity data that minimizes the random errors and instrument bias introduced into the data by the Scintrex CG-5 relative gravimeters that were used. After processing, the standard deviation of the data was estimated to be ±13 microGals. These data reveal that the negative gravity anomaly over the Coso geothermal field, centered on gravity station CER1, is continuing to increase in magnitude over time. Preliminary modeling indicates that water-table drawdown at the location of CER1 is between 65 and 326 meters over the last two decades. We note, however, that several assumptions on which the model results depend, such as constant elevation and free-water level over the study period, still require verification.

  9. Visualization of conduit-matrix conductivity differences in a karst aquifer using time-lapse electrical resistivity

    Science.gov (United States)

    Meyerhoff, Steven B.; Karaoulis, Marios; Fiebig, Florian; Maxwell, Reed M.; Revil, André; Martin, Jonathan B.; Graham, Wendy D.

    2012-12-01

    In the karstic upper Floridan aquifer, surface water flows into conduits of the groundwater system and may exchange with water in the aquifer matrix. This exchange has been hypothesized to occur based on differences in discharge at the Santa Fe River Sink-Rise system, north central Florida, but has yet to be visualized using any geophysical techniques. Using electrical resistivity tomography, we conducted a time-lapse study at two locations with mapped conduits connecting the Santa Fe River Sink to the Santa Fe River Rise to study changes of electrical conductivity during times of varying discharge over a six-week period. Our results show conductivity differences between matrix, conduit changes in resistivity occurring through time at the locations of mapped karst conduits, and changes in electrical conductivity during rainfall infiltration. These observations provide insight into time scales and matrix conduit conductivity differences, illustrating how surface water flow recharged to conduits may flow in a groundwater system in a karst aquifer.

  10. OPTICAL FLOW APPLIED TO TIME-LAPSE IMAGE SERIES TO ESTIMATE GLACIER MOTION IN THE SOUTHERN PATAGONIA ICE FIELD

    Directory of Open Access Journals (Sweden)

    E. Lannutti

    2016-06-01

    Full Text Available In this work, we assessed the feasibility of using optical flow to obtain the motion estimation of a glacier. In general, former investigations used to detect glacier changes involve solutions that require repeated observations which are many times based on extensive field work. Taking into account glaciers are usually located in geographically complex and hard to access areas, deploying time-lapse imaging sensors, optical flow may provide an efficient solution at good spatial and temporal resolution to describe mass motion. Several studies in computer vision and image processing community have used this method to detect large displacements. Therefore, we carried out a test of the proposed Large Displacement Optical Flow method at the Viedma Glacier, located at South Patagonia Icefield, Argentina. We collected monoscopic terrestrial time-lapse imagery, acquired by a calibrated camera at every 24 hour from April 2014 until April 2015. A filter based on temporal correlation and RGB color discretization between the images was applied to minimize errors related to changes in lighting, shadows, clouds and snow. This selection allowed discarding images that do not follow a sequence of similarity. Our results show a flow field in the direction of the glacier movement with acceleration in the terminus. We analyzed the errors between image pairs, and the matching generally appears to be adequate, although some areas show random gross errors related to the presence of changes in lighting. The proposed technique allowed the determination of glacier motion during one year, providing accurate and reliable motion data for subsequent analysis.

  11. Time-lapse ERT and DTS for seasonal and short-term monitoring of an alpine river hyporheic zone

    Science.gov (United States)

    Boaga, Jacopo; Laura, Busato; Mariateresa, Perri; Giorgio, Cassiani

    2016-04-01

    The hyporheic zone (HZ) is the area located beneath and adjacent to rivers and streams, where the interactions between surface water and groundwater take place. This complex physical domain allows the transport of several substances from a stream to the unconfined aquifer below, and vice versa, thus playing a fundamental role in the river ecosystem. The importance of the hyporheic zone makes its characterization a goal shared by several disciplines, which range from applied geophysics to biogeochemistry, from hydraulics to ecology. The frontier field of HZ characterization stays in applied non-invasive methodologies as Electrical Resistivity Tomography - ERT - and Distributed Temperature Sensing - DTS. ERT is commonly applied in cross-well configuration or with a superficial electrodes deployment while DTS is used in hydro-geophysics in the last decade, revealing a wide applicability to the typical issues of this field of study. DTS for hydro-geophysics studies is based on Raman scattering and employs heat as tracer and uses a fiber-optic cable to acquire temperature values. We applied both techniques for an alpine river case studies located in Val di Sole, TN, Italy. The collected measurements allow high-resolution characterization of the hyporheic zone, overcoming the critical problem of invasive measurements under riverbeds. In this work, we present the preliminary results regarding the characterization of the hyporheic zone of the alpine river obtained combining ERT and DTS time-lapse measurements. The data collection benefits from an innovative instrumentation deployment, which consists of both an ERT multicore cable and a DTS fiber-optic located in two separated boreholes drilled 5m under the watercourse and perpendicular to it. In particular we present the first year monitoring results and a short time-lapse monitoring experiment conducted during summer 2015. The site and the results here described are part of the EU FP7 CLIMB (Climate Induced Changes on the

  12. Automated Ground-based Time-lapse Camera Monitoring of West Greenland ice sheet outlet Glaciers: Challenges and Solutions

    Science.gov (United States)

    Ahn, Y.; Box, J. E.; Balog, J.; Lewinter, A.

    2008-12-01

    Monitoring Greenland outlet glaciers using remotely sensed data has drawn a great attention in earth science communities for decades and time series analysis of sensory data has provided important variability information of glacier flow by detecting speed and thickness changes, tracking features and acquiring model input. Thanks to advancements of commercial digital camera technology and increased solid state storage, we activated automatic ground-based time-lapse camera stations with high spatial/temporal resolution in west Greenland outlet and collected one-hour interval data continuous for more than one year at some but not all sites. We believe that important information of ice dynamics are contained in these data and that terrestrial mono-/stereo-photogrammetry can provide theoretical/practical fundamentals in data processing along with digital image processing techniques. Time-lapse images over periods in west Greenland indicate various phenomenon. Problematic is rain, snow, fog, shadows, freezing of water on camera enclosure window, image over-exposure, camera motion, sensor platform drift, and fox chewing of instrument cables, and the pecking of plastic window by ravens. Other problems include: feature identification, camera orientation, image registration, feature matching in image pairs, and feature tracking. Another obstacle is that non-metric digital camera contains large distortion to be compensated for precise photogrammetric use. Further, a massive number of images need to be processed in a way that is sufficiently computationally efficient. We meet these challenges by 1) identifying problems in possible photogrammetric processes, 2) categorizing them based on feasibility, and 3) clarifying limitation and alternatives, while emphasizing displacement computation and analyzing regional/temporal variability. We experiment with mono and stereo photogrammetric techniques in the aide of automatic correlation matching for efficiently handling the enormous

  13. Preliminary observations on polar body extrusion and pronuclear formation in human oocytes using time-lapse video cinematography.

    Science.gov (United States)

    Payne, D; Flaherty, S P; Barry, M F; Matthews, C D

    1997-03-01

    In this study, we have used time-lapse video cinematography to study fertilization in 50 human oocytes that had undergone intracytoplasmic sperm injection (ICSI). Time-lapse recording commenced shortly after ICSI and proceeded for 17-20 h. Oocytes were cultured in an environmental chamber which was maintained under standard culture conditions. Overall, 38 oocytes (76%) were fertilized normally, and the fertilization rate and embryo quality were not significantly different from 487 sibling oocytes cultured in a conventional incubator. Normal fertilization followed a defined course of events, although the timing of these events varied markedly between oocytes. In 35 of the 38 fertilized oocytes (92%), there were circular waves of granulation within the ooplasm which had a periodicity of 20-53 min. The sperm head decondensed during this granulation phase. The second polar body was then extruded, and this was followed by the central formation of the male pronucleus. The female pronucleus formed in the cytoplasm adjacent to the second polar body at the same time as, or slightly after, the male pronucleus, and was subsequently drawn towards the male pronucleus until the two abutted. Both pronuclei then increased in size, the nucleoli moved around within the pronuclei and some nucleoli coalesced. During pronuclear growth, the organelles contracted from the cortex towards the centre of the oocyte, leaving a clear cortical zone. The oocyte decreased in diameter from 112 to 106 microm (P cinematography is an excellent tool for studying fertilization and early embryo development, and have demonstrated that human fertilization comprises numerous complex dynamic events.

  14. Complex Seismic Anisotropy at the Edges of a Very-low Velocity Province in the Lowermost Mantle

    Science.gov (United States)

    Wang, Y.; Wen, L.

    2005-12-01

    A prominent very-low velocity province (VLVP) in the lowermost mantle is revealed, and has been extensively mapped out in recent seismic studies (e.g., Wang and Wen, 2004). Seismic evidence unambiguously indicates that the VLVP is compositionally distinct, and its seismic structure can be best explained by partial melting driven by a compositional change produced in the early Earth's history (Wen, 2001; Wen et. al, 2001; Wang and Wen, 2004). In this presentation, we study the seismic anisotropic behavior inside the VLVP and its surrounding area using SKS and SKKS waveform data. We collect 272 deep earthquakes recorded by more than 80 stations in the Kaapvaal seismic array in southern Africa from 1997 to 1999. Based on the data quality, we choose SKS and SKKS waveform data for 16 earthquakes to measure the anisotropic parameters: the fast polarization direction and the splitting time, using the method of Silver and Chan (1991). A total of 162 high-quality measurements are obtained based on the statistics analysis of shear wave splitting results. The obtained anisotropy exhibits different patterns for the SKS and SKKS phases sampling inside the VLVP and at the edges of the VLVP. When the SKS and SKKS phases sample inside the VLVP, their fast polarization directions exhibit a pattern that strongly correlates with stations, gradually changing from 11°N~to 80°N~across the seismic array from south to north and rotating back to the North direction over short distances for several northernmost stations. The anisotropy pattern obtained from the analysis of the SKKS phases is the same as that from the SKS phases. However, when the SKS and SKKS phases sample at the edges of the VLVP, the measured anisotropy exhibits a very complex pattern. The obtained fast polarization directions change rapidly over a small distance, and they no longer correlate with stations; the measurements obtained from the SKS analysis also differ with those from the SKKS analysis. As the SKS and SKKS

  15. 3-D velocity structures, seismicity patterns, and their tectonic implications across the Andean Foreland of San Juan Argentina

    Science.gov (United States)

    Asmerom, Biniam Beyene

    Three-dimensional velocity structures and seismicity patterns have been studied across the Andean Foreland of San Juan Argentina using data acquired by PANDA deployment. Distinct velocity variations are revealed between Precordillera in the west and Pie de Palo in the east. The low velocity anomaly beneath Precordillera is associated with the presence of thick sedimentary rocks and thick sediment cover of Matagusanos valley. Similarly, the high velocity anomaly east of Eastern Precordillera is correlated with the presence of basement rocks. These anomalies are observed from the station corrections of Joint Hypocentral Determination (JHD) analysis. A northeast trending west dipping high velocity anomaly is imaged beneath the southern half of Pie de Palo. This anomaly represents a Grenvillian suture zone formed when Pie de Palo collided with the Precordillera. Relocated seismicity using 3-D Vp and Vs models obtained in this study revealed crustal scale buried faults beneath the Eastern Precordillera and Sierra Pie de Palo. The fault defined by the seismicity extend down to a depth of ˜ 40 km and ~35 km beneath Precordillera and Pie de Palo, respectively, defining the lower bound of the brittle to ductile transition of the crust. These results confirm that present day active crustal thickening involves the entire crust in the tectonic process and results in thick-skinned deformation beneath both the Eastern Precordillera and Pie de Palo. Based on the seismicity pattern, geomorphology, and velocity structures, Sierra Pie de Palo, a basement uplift block, can be divided into two separate semi-blocks separated by a northeast trending fracture zone. The northern block is characterized by a well-defined west dipping fault and low Vp/Vs ratio particularly at a depth of 12 to 16 km, while the southern block shows a poorly-defined east dipping fault with high Vp/Vs ratio at a depth of 20 to 26 km. Spatial distribution of the well-relocated crustal earthquakes along these

  16. Examining the information content of time-lapse crosshole GPR data collected under different infiltration conditions to estimate unsaturated soil hydraulic properties

    DEFF Research Database (Denmark)

    Scholer, M.; Irving, J.; Zibar, Majken Caroline Looms

    2013-01-01

    Time-lapse geophysical data acquired during transient hydrological experiments are being increasingly employed to estimate subsurface hydraulic properties at the field scale. In particular, crosshole ground-penetrating radar (GPR) data, collected while water infiltrates into the subsurface either...... by natural or artificial means, have been demonstrated in a number of studies to contain valuable information concerning the hydraulic properties of the unsaturated zone. Previous work in this domain has considered a variety of infiltration conditions and different amounts of time-lapse GPR data...... of time-lapse zero-offset-profile (ZOP) GPR traveltime data, collected under three different infiltration conditions, for the estimation of van Genuchten–Mualem (VGM) parameters in a layered subsurface medium. Specifically, we systematically analyze synthetic and field GPR data acquired under natural...

  17. Seismic Travel Time Tomography in Modeling Low Velocity Anomalies between the Boreholes

    Science.gov (United States)

    Octova, A.; Sule, R.

    2018-04-01

    Travel time cross-hole seismic tomography is applied to describing the structure of the subsurface. The sources are placed at one borehole and some receivers are placed in the others. First arrival travel time data that received by each receiver is used as the input data in seismic tomography method. This research is devided into three steps. The first step is reconstructing the synthetic model based on field parameters. Field parameters are divided into 24 receivers and 45 receivers. The second step is applying inversion process for the field data that consists of five pairs bore holes. The last step is testing quality of tomogram with resolution test. Data processing using FAST software produces an explicit shape and resemble the initial model reconstruction of synthetic model with 45 receivers. The tomography processing in field data indicates cavities in several place between the bore holes. Cavities are identified on BH2A-BH1, BH4A-BH2A and BH4A-BH5 with elongated and rounded structure. In resolution tests using a checker-board, anomalies still can be identified up to 2 meter x 2 meter size. Travel time cross-hole seismic tomography analysis proves this mothod is very good to describing subsurface structure and boundary layer. Size and anomalies position can be recognized and interpreted easily.

  18. Structure and Deformation in the Transpressive Zone of Southern California Inferred from Seismicity, Velocity, and Qp Models

    Science.gov (United States)

    Hauksson, E.; Shearer, P.

    2004-12-01

    We synthesize relocated regional seismicity and 3D velocity and Qp models to infer structure and deformation in the transpressive zone of southern California. These models provide a comprehensive synthesis of the tectonic fabric of the upper to middle crust, and the brittle ductile transition zone that in some cases extends into the lower crust. The regional seismicity patterns in southern California are brought into focus when the hypocenters are relocated using the double difference method. In detail, often the spatial correlation between background seismicity and late Quaternary faults is improved as the hypocenters become more clustered, and the spatial patterns are more sharply defined. Along some of the strike-slip faults the seismicity clusters decrease in width and form alignments implying that in many cases the clusters are associated with a single fault. In contrast, the Los Angeles Basin seismicity remains mostly scattered, reflecting a 3D distribution of the tectonic compression. We present the results of relocating 327,000 southern California earthquakes that occurred between 1984 and 2002. In particular, the depth distribution is improved and less affected by layer boundaries in velocity models or other similar artifacts, and thus improves the definition of the brittle ductile transition zone. The 3D VP and VP/VS models confirm existing tectonic interpretations and provide new insights into the configuration of the geological structures in southern California. The models extend from the US-Mexico border in the south to the Coast Ranges and Sierra Nevada in the north, and have 15 km horizontal grid spacing and an average vertical grid spacing of 4 km, down to 22 km depth. The heterogeneity of the crustal structure as imaged in both the VP and VP/VS models is larger within the Pacific than the North America plate, reflecting regional asymmetric variations in the crustal composition and past tectonic processes. Similarly, the relocated seismicity is

  19. Seismic velocities and attenuation in an underground granitic waste repository subjected to heating

    International Nuclear Information System (INIS)

    Paulsson, B.N.P.; King, M.S.

    1984-03-01

    The behavior of a granitic rock mass subjected to thermal load has been studied by an acoustic cross-hole technique between four boreholes, over a period of some two years. Velocities between boreholes were obtained from the times-of-flight of pulses of acoustic waves between transducers clamped to the borehole wall. The attenuation was obtained by a spectral ratios technique. When the heater was turned on, the velocities increased rapidly to an asymptotic value. When the heater was turned off, the velocities decreased rapidly to their original values or below. Velocities along a particular profile were found to increase linearly with the mean temperature in the profile tested. The attenuation showed little correlation with changes in temperature or the associated thermal stresses, but there was a good correlation of attenuation with water content and the related changes in pore pressure. 18 references, 7 figures

  20. Fighting for territories: time-lapse analysis of dental pulp and dental follicle stem cells in co-culture reveals specific migratory capabilities

    Directory of Open Access Journals (Sweden)

    C Schiraldi

    2012-11-01

    Full Text Available Stem cell migration is a critical step during the repair of damaged tissues. In order to achieve appropriate cell-based therapies for tooth and periodontal ligament repair it is necessary first to understand the dynamics of tissue-specific stem cell populations such as dental pulp stem cells (DPSC and dental follicle stem cells (DFSC. Using time-lapse imaging, we analysed migratory and proliferative capabilities of these two human stem cell lines in vitro. When cultured alone, both DPSC and DFSC exhibited low and irregular migration profiles. In co-cultures, DFSC, but not DPSC, spectacularly increased their migration activity and velocity. DFSC rapidly surrounded the DPSC, thus resembling the in vivo developmental process, where follicle cells encircle both dental epithelium and pulp. Cell morphology was dependent on the culture conditions (mono-culture or co-culture and changed over time. Regulatory genes involved in dental cell migration and differentiation such as TWIST1, MSX1, RUNX2, SFRP1 and ADAM28, were also evaluated in co-cultures. MSX1 up-regulation indicates that DPSC and DFSC retain their odontogenic potential. However, DPSC lose their capacity to differentiate into odontoblasts in the presence of DFSC, as suggested by RUNX2 up-regulation and TWIST1 down-regulation. In contrast, the unchanged levels of SFRP1 expression suggest that DFSC retain their potential to form periodontal tissues even in the presence of DPSC. These findings demonstrate that stem cells behave differently according to their environment, retain their genetic memory, and compete with each other to acquire the appropriate territory. Understanding the mechanisms involved in stem cell migration may lead to new therapeutic approaches for tooth repair.

  1. Seismic microzonation and velocity models of El Ejido area (SE Spain) from the diffuse-field H/V method

    Science.gov (United States)

    García-Jerez, Antonio; Seivane, Helena; Navarro, Manuel; Piña-Flores, José; Luzón, Francisco; Vidal, Francisco; Posadas, Antonio M.; Aranda, Carolina

    2016-04-01

    El Ejido town is located in the Campo de Dalías coastal plain (Almería province, SE Spain), emplaced in one of the most seismically active regions of Spain. The municipality has 84000 inhabitants and presented a high growth rate during the last twenty years. The most recent intense seismic activity occurred close to this town was in 1993 and 1994, with events of Mb = 4.9 and Mb = 5.0, respectively. To provide a basis for site-specific hazard analysis, we first carried out a seismic microzonation of this town in terms of predominant periods and geotechnical properties. The predominant periods map was obtained from ambient noise observations on a grid of 250 x 250 m in the main urban area, and sparser measurements on the outskirts. These broad-band records, of about 20 minutes long each, were analyzed by using the horizontal-to-vertical spectral ratio technique (H/V). Dispersion curves obtained from two array measurements of ambient noise and borehole data provided additional geophysical information. All the surveyed points in the town were found to have relatively long predominant periods ranging from 0.8 to 2.3 s and growing towards the SE. Secondary high-frequency (> 2Hz) peaks were found at about the 10% of the points only. On the other hand, Vs30 values of 550 - 650 m/s were estimated from the array records, corresponding to cemented sediments and medium-hard rocks. The local S-wave velocity structure has been inverted from the H/V curves for a subset of the measurement sites. We used an innovative full-wavefield method based on the diffuse-wavefield approximation (Sánchez-Sesma et al., 2011) combined with the simulated annealing algorithm. Shallow seismic velocities and deep boreholes data were used as constraints. The results show that the low-frequency resonances are related with the impedance contrast between several hundred meters of medium-hard sedimentary rocks (marls and calcarenites) with the stiffer basement of the basin, which dips to the SE. These

  2. Blind test of methods for obtaining 2-D near-surface seismic velocity models from first-arrival traveltimes

    Science.gov (United States)

    Zelt, Colin A.; Haines, Seth; Powers, Michael H.; Sheehan, Jacob; Rohdewald, Siegfried; Link, Curtis; Hayashi, Koichi; Zhao, Don; Zhou, Hua-wei; Burton, Bethany L.; Petersen, Uni K.; Bonal, Nedra D.; Doll, William E.

    2013-01-01

    Seismic refraction methods are used in environmental and engineering studies to image the shallow subsurface. We present a blind test of inversion and tomographic refraction analysis methods using a synthetic first-arrival-time dataset that was made available to the community in 2010. The data are realistic in terms of the near-surface velocity model, shot-receiver geometry and the data's frequency and added noise. Fourteen estimated models were determined by ten participants using eight different inversion algorithms, with the true model unknown to the participants until it was revealed at a session at the 2011 SAGEEP meeting. The estimated models are generally consistent in terms of their large-scale features, demonstrating the robustness of refraction data inversion in general, and the eight inversion algorithms in particular. When compared to the true model, all of the estimated models contain a smooth expression of its two main features: a large offset in the bedrock and the top of a steeply dipping low-velocity fault zone. The estimated models do not contain a subtle low-velocity zone and other fine-scale features, in accord with conventional wisdom. Together, the results support confidence in the reliability and robustness of modern refraction inversion and tomographic methods.

  3. Seismic velocity structure and microearthquake source properties at The Geysers, California, geothermal area

    Energy Technology Data Exchange (ETDEWEB)

    O' Connell, D.R.

    1986-12-01

    The method of progressive hypocenter-velocity inversion has been extended to incorporate S-wave arrival time data and to estimate S-wave velocities in addition to P-wave velocities. S-wave data to progressive inversion does not completely eliminate hypocenter-velocity tradeoffs, but they are substantially reduced. Results of a P and S-wave progressive hypocenter-velocity inversion at The Geysers show that the top of the steam reservoir is clearly defined by a large decrease of V/sub p//V/sub s/ at the condensation zone-production zone contact. The depth interval of maximum steam production coincides with minimum observed V/sub p//V/sub s/, and V/sub p//V/sub s/ increses below the shallow primary production zone suggesting that reservoir rock becomes more fluid saturated. The moment tensor inversion method was applied to three microearthquakes at The Geysers. Estimated principal stress orientations were comparable to those estimated using P-wave firstmotions as constraints. Well constrained principal stress orientations were obtained for one event for which the 17 P-first motions could not distinguish between normal-slip and strike-slip mechanisms. The moment tensor estimates of principal stress orientations were obtained using far fewer stations than required for first-motion focal mechanism solutions. The three focal mechanisms obtained here support the hypothesis that focal mechanisms are a function of depth at The Geysers. Progressive inversion as developed here and the moment tensor inversion method provide a complete approach for determining earthquake locations, P and S-wave velocity structure, and earthquake source mechanisms.

  4. Velocity variations associated with the large 2010 eruption of Merapi volcano, Java, retrieved from seismic multiplets and ambient noise cross-correlation

    Science.gov (United States)

    Budi-Santoso, Agus; Lesage, Philippe

    2016-07-01

    We present a study of the seismic velocity variations that occurred in the structure before the large 2010 eruption of Merapi volcano. For the first time to our knowledge, the technique of coda wave interferometry is applied to both families of similar events (multiplets) and to correlation functions of seismic noise. About half of the seismic events recorded at the summit stations belong to one of the ten multiplets identified, including 120 similar events that occurred in the last 20 hr preceding the eruption onset. Daily noise cross-correlation functions (NCF) were calculated for the six pairs of short-period stations available. Using the stretching method, we estimate time-series of apparent velocity variation (AVV) for each multiplet and each pair of stations. No significant velocity change is detected until September 2010. From 10 October to the beginning of the eruption on 26 October, a complex pattern of AVV is observed with amplitude of up to ±1.5 per cent. Velocity decrease is first observed from families of deep events and then from shallow earthquakes. In the same period, AVV with different signs and chronologies are estimated from NCF calculated for various station pairs. The location in the horizontal plane of the velocity perturbations related with the AVV obtained from NCF is estimated by using an approach based on the radiative transfer approximation. Although their spatial resolution is limited, the resulting maps display velocity decrease in the upper part of the edifice in the period 12-25 October. After the eruption onset, the pattern of velocity perturbations is significantly modified with respect to the previous one. We interpret these velocity variations in the framework of a scenario of magmatic intrusion that integrates most observations. The perturbation of the stress field associated with the magma migration can induce both decrease and increase of the seismic velocity of rocks. Thus the detected AVVs can be considered as precursors of

  5. Seismic moment tensor inversion using 3D velocity model and its application to the 2013 Lushan earthquake sequence

    Science.gov (United States)

    Zhu, Lupei; Zhou, Xiaofeng

    2016-10-01

    Source inversion of small-magnitude events such as aftershocks or mine collapses requires use of relatively high frequency seismic waveforms which are strongly affected by small-scale heterogeneities in the crust. In this study, we developed a new inversion method called gCAP3D for determining general moment tensor of a seismic source using Green's functions of 3D models. It inherits the advantageous features of the ;Cut-and-Paste; (CAP) method to break a full seismogram into the Pnl and surface-wave segments and to allow time shift between observed and predicted waveforms. It uses grid search for 5 source parameters (relative strengths of the isotropic and compensated-linear-vector-dipole components and the strike, dip, and rake of the double-couple component) that minimize the waveform misfit. The scalar moment is estimated using the ratio of L2 norms of the data and synthetics. Focal depth can also be determined by repeating the inversion at different depths. We applied gCAP3D to the 2013 Ms 7.0 Lushan earthquake and its aftershocks using a 3D crustal-upper mantle velocity model derived from ambient noise tomography in the region. We first relocated the events using the double-difference method. We then used the finite-differences method and reciprocity principle to calculate Green's functions of the 3D model for 20 permanent broadband seismic stations within 200 km from the source region. We obtained moment tensors of the mainshock and 74 aftershocks ranging from Mw 5.2 to 3.4. The results show that the Lushan earthquake is a reverse faulting at a depth of 13-15 km on a plane dipping 40-47° to N46° W. Most of the aftershocks occurred off the main rupture plane and have similar focal mechanisms to the mainshock's, except in the proximity of the mainshock where the aftershocks' focal mechanisms display some variations.

  6. Time-lapse gravity and levelling in the sinkhole-endangered urban area of Bad Frankenhausen, Germany

    Science.gov (United States)

    Kobe, Martin; Gabriel, Gerald; Weise, Adelheid; Krawczyk, Charlotte; Vogel, Detlef

    2017-04-01

    Sinkholes, resulting from subrosion in the subsurface, can reach diameters of several hundred meters and thus pose a severe hazard for infrastructure and inhabitants in urban areas. Subrosion is the leaching of readily-soluble rocks, such as rock salt, gypsum, anhydrite and limestone by ground or meteoric water and leads to mass transport and relocation. Two scenarios of sinkhole evolution are conceivable: First, the surface subsides continuously in order to compensate for the mass loss. Second, the mass relocation leads to development of subsurface cavities. If they reach a critical size and the cover layers are not supported anymore, the surface collapses abruptly. To improve the understanding of subrosion processes and the related surface deformation a case study is conducted in Bad Frankenhausen, Germany, where subrosion leaches the Zechstein evaporates of the Permian. One part of the study is to analyse the spatiotemporal development of sinkholes by applying time-lapse observations. Therefore, we established a monitoring network consisting of 15 gravity and additional levelling points covering the main sinkhole areas in the city centre. In March 2014, the baseline survey was carried out. Since then, quarterly measurement campaigns are performed. In each campaign four different gravity meters are used to collect a statistical significant amount of data and to control the plausibility of our data. The gravity measurements are complemented by levelling surveys. The rectification of the time-lapse gravity data comprises the correction for jumps and systematic errors, as well as for well calculable influences, such as earth tides and air pressure changes. Furthermore, special interest was applied to seasonal changes of hydrological parameters such as soil moisture or groundwater level. We found the hydrological influence to be in the single digit up to the lower two-digit µGal range, depending on the season and the station. The standard deviations of the adjusted

  7. Regional three-dimensional seismic velocity model of the crust and uppermost mantle of northern California

    Science.gov (United States)

    Thurber, C.; Zhang, H.; Brocher, T.; Langenheim, V.

    2009-01-01

    We present a three-dimensional (3D) tomographic model of the P wave velocity (Vp) structure of northern California. We employed a regional-scale double-difference tomography algorithm that incorporates a finite-difference travel time calculator and spatial smoothing constraints. Arrival times from earthquakes and travel times from controlled-source explosions, recorded at network and/or temporary stations, were inverted for Vp on a 3D grid with horizontal node spacing of 10 to 20 km and vertical node spacing of 3 to 8 km. Our model provides an unprecedented, comprehensive view of the regional-scale structure of northern California, putting many previously identified features into a broader regional context and improving the resolution of a number of them and revealing a number of new features, especially in the middle and lower crust, that have never before been reported. Examples of the former include the complex subducting Gorda slab, a steep, deeply penetrating fault beneath the Sacramento River Delta, crustal low-velocity zones beneath Geysers-Clear Lake and Long Valley, and the high-velocity ophiolite body underlying the Great Valley. Examples of the latter include mid-crustal low-velocity zones beneath Mount Shasta and north of Lake Tahoe. Copyright 2009 by the American Geophysical Union.

  8. Analysis of embryo morphokinetics, multinucleation and cleavage anomalies using continuous time-lapse monitoring in blastocyst transfer cycles.

    Science.gov (United States)

    Desai, Nina; Ploskonka, Stephanie; Goodman, Linnea R; Austin, Cynthia; Goldberg, Jeffrey; Falcone, Tommaso

    2014-06-20

    Time-lapse imaging combined with embryo morphokinetics may offer a non-invasive means for improving embryo selection. Data from clinics worldwide are necessary to compare and ultimately develop embryo classifications models using kinetic data. The primary objective of this study was to determine if there were kinetic differences between embryos with limited potential and those more often associated with in vitro blastocyst formation and/or implantation. We also wanted to compare putative kinetic markers for embryo selection as proposed by other laboratories to what we were observing in our own laboratory setting. Kinetic data and cycle outcomes were retrospectively analyzed in patients age 39 and younger with 7 or more zygotes cultured in the Embryoscope. Timing of specific events from the point of insemination were determined using time-lapse (TL) imaging. The following kinetic markers were assessed: time to syngamy (tPNf), t2, time to two cells (c), 3c (t3), 4c ( t4), 5c (t5), 8c (t8), morula (tMor), start of blastulation (tSB); tBL, blastocyst (tBL); expanded blastocyst (tEBL). Durations of the second (cc2) and third (cc3) cell cycles, the t5-t2 interval as well as time to complete synchronous divisions s1, s2 and s3 were calculated. Incidence and impact on development of nuclear and cleavage anomalies were also assessed. A total of 648 embryos transferred on day 5 were analyzed. The clinical pregnancy and implantation rate were 72% and 50%, respectively. Morphokinetic data showed that tPNf, t2,t4, t8, s1, s2,s3 and cc2 were significantly different in embryos forming blastocysts (ET or frozen) versus those with limited potential either failing to blastulate or else forming poor quality blastocysts ,ultimately discarded. Comparison of embryo kinetics in cycles with all embryos implanting (KID+) versus no implantation (KID-) suggested that markers of embryo competence to implant may be different from ability to form a blastocyst. The incidence of multinucleation

  9. An effective assay for high cellular resolution time-lapse imaging of sensory placode formation and morphogenesis

    Directory of Open Access Journals (Sweden)

    Das Raman M

    2011-05-01

    Full Text Available Abstract Background The vertebrate peripheral nervous system contains sensory neurons that arise from ectodermal placodes. Placodal cells ingress to move inside the head to form sensory neurons of the cranial ganglia. To date, however, the process of placodal cell ingression and underlying cellular behavior are poorly understood as studies have relied upon static analyses on fixed tissues. Visualizing placodal cell behavior requires an ability to distinguish the surface ectoderm from the underlying mesenchyme. This necessitates high resolution imaging along the z-plane which is difficult to accomplish in whole embryos. To address this issue, we have developed an imaging system using cranial slices that allows direct visualization of placode formation. Results We demonstrate an effective imaging assay for capturing placode development at single cell resolution using chick embryonic tissue ex vivo. This provides the first time-lapse imaging of mitoses in the trigeminal placodal ectoderm, ingression, and intercellular contacts of placodal cells. Cell divisions with varied orientations were found in the placodal ectoderm all along the apical-basal axis. Placodal cells initially have short cytoplasmic processes during ingression as young neurons and mature over time to elaborate long axonal processes in the mesenchyme. Interestingly, the time-lapse imaging data reveal that these delaminating placodal neurons begin ingression early on from within the ectoderm, where they start to move and continue on to exit as individual or strings of neurons through common openings on the basal side of the epithelium. Furthermore, dynamic intercellular contacts are abundant among the delaminating placodal neurons, between these and the already delaminated cells, as well as among cells in the forming ganglion. Conclusions This new imaging assay provides a powerful method to analyze directly development of placode-derived sensory neurons and subsequent ganglia

  10. Seismic Imaging and Velocity Analysis Using a Pseudo Inverse to the Extended Born Approximation

    KAUST Repository

    Alali, Abdullah A.

    2018-05-01

    Prestack depth migration requires an accurate kinematic velocity model to image the subsurface correctly. Wave equation migration velocity analysis techniques aim to update the background velocity model by minimizing image residuals to achieve the correct model. The most commonly used technique is differential semblance optimization (DSO), which depends on applying an image extension and penalizing the energy in the non-physical extension. However, studies show that the conventional DSO gradient is contaminated with artifact noise and unwanted oscillations which might lead to local minima. To deal with this issue and improve the stability of DSO, recent studies proposed to use an inversion formula rather than migration to obtain the image. Migration is defined as the adjoint of Born modeling. Since the inversion is complicated and expensive, a pseudo inverse is used instead. A pseudo inverse formula has been developed recently for the horizontal space shift extended Born. This formula preserves the true amplitude and reduces the artifact noise even when an incorrect velocity is used. Although the theory for such an inverse is well developed, it has only been derived and tested on laterally homogeneous models. This is because the formula contains a derivative of the image with respect to a vertical extension evaluated at zero offset. Implementing the vertical extension is computationally expensive, which means this derivative needs to be computed without applying the additional extension. For laterally invariant models, the inverse is simplified and this derivative is eliminated. I implement the full asymptotic inverse to the extended Born to account for laterally heterogeneity. I compute the derivative of the image with respect to a vertical extension without performing any additional shift. This is accomplished by applying the derivative to the imaging condition and utilizing the chain rule. The fact that this derivative is evaluated at zero offset vertical

  11. Seismic velocities and geologic logs from boreholes at three downhole arrays in San Francisco, California

    Science.gov (United States)

    Gibbs, James F.; Fumal, Thomas E.; Borcherdt, Roger D.; Warrick, Richard E.; Liu, Hsi-Ping; Westerlund, Robert E.

    1994-01-01

    The Loma Prieta earthquake of October 17, 1989 (1704 PST), has reinforced observations made by Wood and others (1908) after the 1906 San Francisco earthquake, that poor ground conditions (soft soil) increase the likelihood of shaking damage to structures. Since 1908 many studies (for example Borcherdt, 1970, Borcherdt and Gibbs, 1976, Borcherdt and Glassmoyer, 1992) have shown that soft soils amplify seismic waves at frequencies that can be damaging to structures. Damage in the City of San Francisco from the Loma Prieta earthquake was concentrated in the Marina District, the Embarcadero, and the China Basin areas. Each of these areas, to some degree, is underlain by soft soil deposits. These concentrations of damage raise important questions regarding the amplification effects of such deposits at damaging levels of motion. Unfortunately, no strong-motion recordings were obtained in these areas during the Loma Prieta earthquake and only a limited number (< 10) have been obtained on other soft soil sites in the United States. Consequently, important questions exist regarding the response of such deposits during damaging earthquakes, especially questions regarding the nonlinear soil response. Towards developing a data set to address these important questions, borehole strong-motion arrays have been installed at three locations. These arrays consist of groups of wide-dynamic-range pore-pressure transducers and three-component accelerometers, the outputs of which are recorded digitally. The arrays are designed to provide an integrated set of data on ground shaking, liquifaction-induced ground failure, and structural response. This report describes the detailed geologic, seismic, and material-property determinations derived at each of these sites.

  12. Time-lapse culture with morphokinetic embryo selection improves pregnancy and live birth chances and reduces early pregnancy loss: a meta-analysis.

    Science.gov (United States)

    Pribenszky, Csaba; Nilselid, Anna-Maria; Montag, Markus

    2017-11-01

    Embryo evaluation and selection is fundamental in clinical IVF. Time-lapse follow-up of embryo development comprises undisturbed culture and the application of the visual information to support embryo evaluation. A meta-analysis of randomized controlled trials was carried out to study whether time-lapse monitoring with the prospective use of a morphokinetic algorithm for selection of embryos improves overall clinical outcome (pregnancy, early pregnancy loss, stillbirth and live birth rate) compared with embryo selection based on single time-point morphology in IVF cycles. The meta-analysis of five randomized controlled trials (n = 1637) showed that the application of time-lapse monitoring was associated with a significantly higher ongoing clinical pregnancy rate (51.0% versus 39.9%), with a pooled odds ratio of 1.542 (P loss (15.3% versus 21.3%; OR: 0.662; P = 0.019) and a significantly increased live birth rate (44.2% versus 31.3%; OR 1.668; P = 0.009). Difference in stillbirth was not significant between groups (4.7% versus 2.4%). Quality of the evidence was moderate to low owing to inconsistencies across the studies. Selective application and variability were also limitations. Although time-lapse is shown to significantly improve overall clinical outcome, further high-quality evidence is needed before universal conclusions can be drawn. Copyright © 2017 The Author(s). Published by Elsevier Ltd.. All rights reserved.

  13. Monitoring channel head erosion processes in response to an artificially induced abrupt base level change using time-lapse photography 2301

    Science.gov (United States)

    Headcut and channel extension in response to an abrupt base level change in 2004 of approximately 1m was studied in a 1.29 ha semiarid headwater drainage on the Walnut Gulch Experimental Watershed (WGEW) in southeastern Arizona, USA. Field observations and time-lapse photography were coupled with hy...

  14. Time-lapse analysis of methane quantity in Mary Lee group of coal seams using filter-based multiple-point geostatistical simulation

    Science.gov (United States)

    Karacan, C. Özgen; Olea, Ricardo A.

    2013-01-01

    Coal seam degasification and its success are important for controlling methane, and thus for the health and safety of coal miners. During the course of degasification, properties of coal seams change. Thus, the changes in coal reservoir conditions and in-place gas content as well as methane emission potential into mines should be evaluated by examining time-dependent changes and the presence of major heterogeneities and geological discontinuities in the field. In this work, time-lapsed reservoir and fluid storage properties of the New Castle coal seam, Mary Lee/Blue Creek seam, and Jagger seam of Black Warrior Basin, Alabama, were determined from gas and water production history matching and production forecasting of vertical degasification wellbores. These properties were combined with isotherm and other important data to compute gas-in-place (GIP) and its change with time at borehole locations. Time-lapsed training images (TIs) of GIP and GIP difference corresponding to each coal and date were generated by using these point-wise data and Voronoi decomposition on the TI grid, which included faults as discontinuities for expansion of Voronoi regions. Filter-based multiple-point geostatistical simulations, which were preferred in this study due to anisotropies and discontinuities in the area, were used to predict time-lapsed GIP distributions within the study area. Performed simulations were used for mapping spatial time-lapsed methane quantities as well as their uncertainties within the study area.

  15. How a joint interpretation of seismic scattering, velocity, and attenuation models explains the nature of the Campi Flegrei (Italy).

    Science.gov (United States)

    Calo, M.; Tramelli, A.

    2017-12-01

    Seismic P and S velocity models (and their ratio Vp/Vs) help illuminating the geometrical structure of the bodies and give insight on the presence of water, molten or gas saturated regions. Seismic attenuation represents the anelastic behavior of the medium. Due to its dependence on temperature, fluid contents and cracks presence, this parameter is also largely used to characterize the structures of volcanoes and geothermal areas. Scattering attenuation is related, in the upper crust, to the amount, size and organization of the fractures giving complementary information on the state of the medium.Therefore a joint interpretation of these models provides an exhaustive view of the elastic parameters in volcanic regions. Campi Flegrei is an active Caldera marked by strong vertical deformations of the ground called bradyseisms and several models have been proposed to describe the nature and the geometry of the bodies responsible of the bradyseisms. Here we show Vp, Vp/Vs, Qp and scattering models carried out by applying an enhanced seismic tomography method that combines de double difference approach (Zhang and Thurber, 2003) and the Weigthed Average Method (Calò et al., 2009, Calò et al., 2011, 2013). The data used are the earthquakes recorded during the largest bradyseism crisis of the 80's. Our method allowed to image structures with linear dimension of 0.5-1.2km, resulting in an improvement of the resolving power at least two times of the other published models (e.g. Priolo et al., 2012). The joint interpretation of seismic models allowed to discern small anomalous bodies at shallow depth (0.5-2.0 km) marked by relatively low Vp, high Vp/Vs ratio and low Qp values associated with the presence of shallow geothermal water saturated reservoir from regions with low Vp, low Vp/Vs and low Qp related to the gas saturated part of the reservoir. At deeper depth (2-3.5 km) bodies with high Vp and Vp/Vs and low Qp are associated with magmatic intrusions. The Scattering

  16. Continental lithospheric subduction and intermediate-depth seismicity: Constraints from S-wave velocity structures in the Pamir and Hindu Kush

    Science.gov (United States)

    Li, Wei; Chen, Yun; Yuan, Xiaohui; Schurr, Bernd; Mechie, James; Oimahmadov, Ilhomjon; Fu, Bihong

    2018-01-01

    The Pamir has experienced more intense deformation and shortening than Tibet, although it has a similar history of terrane accretion. Subduction as a primary way to accommodate lithospheric shortening beneath the Pamir has induced the intermediate-depth seismicity, which is rare in Tibet. Here we construct a 3D S-wave velocity model of the lithosphere beneath the Pamir by surface wave tomography using data of the TIPAGE (Tien Shan-Pamir Geodynamic program) and other seismic networks in the area. We imaged a large-scale low velocity anomaly in the crust at 20-50 km depth in the Pamir overlain by a high velocity anomaly at a depth shallower than 15 km. The high velocity anomalies colocate with exposed gneiss domes, which may imply a similar history of crustal deformation, partial melting and exhumation in the hinterland, as has occurred in the Himalaya/Tibet system. At mantle depths, where the intermediate-depth earthquakes are located, a low velocity zone is clearly observed extending to about 180 km and 150 km depth in the Hindu Kush and eastern Pamir, respectively. Moreover, the geometry of the low-velocity anomaly suggests that lower crustal material has been pulled down into the mantle by the subducting Asian and Indian lithospheric mantle beneath the Pamir and Hindu Kush, respectively. Metamorphic processes in the subducting lower crust may cause the intermediate-depth seismicity down to 150-180 km depth beneath the Pamir and Hindu Kush. We inverted focal mechanisms in the seismic zone for the stress field. Differences in the stress field between the upper and lower parts of the Indian slab imply that subduction and detachment of the Indian lithosphere might cause intense seismicity associated with the thermal shear instability in the deep Hindu Kush.

  17. Shear wave velocities in the upper mantle of the Western Alps: new constraints using array analysis of seismic surface waves

    Science.gov (United States)

    Lyu, Chao; Pedersen, Helle A.; Paul, Anne; Zhao, Liang; Solarino, Stefano

    2017-07-01

    It remains challenging to obtain absolute shear wave velocities of heterogeneities of small lateral extension in the uppermost mantle. This study presents a cross-section of Vs across the strongly heterogeneous 3-D structure of the western European Alps, based on array analysis of data from 92 broad-band seismic stations from the CIFALPS experiment and from permanent networks in France and Italy. Half of the stations were located along a dense sublinear array. Using a combination of these stations and off-profile stations, fundamental-mode Rayleigh wave dispersion curves were calculated using a combined frequency-time beamforming approach. We calculated dispersion curves for seven arrays of approximately 100 km aperture and 14 arrays of approximately 50 km aperture, the latter with the aim of obtaining a 2-D vertical cross-section of Vs beneath the western Alps. The dispersion curves were inverted for Vs(z), with crustal interfaces imposed from a previous receiver function study. The array approach proved feasible, as Vs(z) from independent arrays vary smoothly across the profile length. Results from the seven large arrays show that the shear velocity of the upper mantle beneath the European plate is overall low compared to AK135 with the lowest velocities in the internal part of the western Alps, and higher velocities east of the Alps beneath the Po plain. The 2-D Vs model is coherent with (i) a ∼100 km thick eastward-dipping European lithosphere west of the Alps, (ii) very high velocities beneath the Po plain, coherent with the presence of the Alpine (European) slab and (iii) a narrow low-velocity anomaly beneath the core of the western Alps (from the Briançonnais to the Dora Maira massif), and approximately colocated with a similar anomaly observed in a recent teleseismic P-wave tomography. This intriguing anomaly is also supported by traveltime variations of subvertically propagating body waves from two teleseismic events that are approximately located on

  18. Composition of the low seismic velocity E' layer at the top of Earth's core

    Science.gov (United States)

    Badro, J.; Brodholt, J. P.

    2017-12-01

    Evidence for a layer (E') at the top of the outer core has been available since the '90s and while different studies suggest slightly different velocity contrasts and thicknesses, the common observation is that the layer has lower velocities than the bulk outer core (PREM). Although there are no direct measurements on the density of this layer, dynamic stability requires it to be less dense than the bulk outer core under those same pressure and temperature conditions. Using ab initio simulations on Fe-Ni-S-C-O-Si liquids we constrain the origin and composition of the low-velocity layer E' at the top of Earth's outer core. We find that increasing the concentration of any light-element always increases velocity and so a low-velocity and low-density layer (for stability) cannot be made by simply increasing light element concentration. This rules out barodiffusion or upwards sedimentation of a light phase for its origin. However, exchanging elements can—depending on the elements exchanged—produce such a layer. We evaluate three possibilities. Firstly, crystallization of a light phase from a core containing more than one light element may make such a layer, but only if the crystalizing phase is very Fe-rich, which is at odds with available phase diagrams at CMB conditions. Secondly, the E' layer may result from incomplete mixing of an early Earth core with a late impactor, depending on the light element compositions of the impactor and Earth's core, but such a primordial stratification is neither supported by dynamical models of the core nor thermodynamic models of core merger after the giant impact. The last and most plausible scenario is core-mantle chemical interaction; using thermodynamic models for metal-silicate partitioning of silicon and oxygen at CMB conditions, we show that a reaction between the core and an FeO-rich basal magma ocean can enrich the core in oxygen while depleting it in silicon, in relative amounts that produce a light and slow layer

  19. The Relationship between Cell Number, Division Behavior and Developmental Potential of Cleavage Stage Human Embryos: A Time-Lapse Study.

    Directory of Open Access Journals (Sweden)

    Xiangyi Kong

    Full Text Available Day 3 cleavage embryo transfer is routine in many assisted reproductive technology centers today. Embryos are usually selected according to cell number, cell symmetry and fragmentation for transfer. Many studies have showed the relationship between cell number and embryo developmental potential. However, there is limited understanding of embryo division behavior and their association with embryo cell number and developmental potential. A retrospective and observational study was conducted to investigate how different division behaviors affect cell number and developmental potential of day 3 embryos by time-lapse imaging. Based on cell number at day 3, the embryos (from 104 IVF/intracytoplasmic sperm injection (ICSI treatment cycles, n = 799 were classified as follows: less than 5 cells (10C; n = 42. Division behavior, morphokinetic parameters and blastocyst formation rate were analyzed in 5 groups of day 3 embryos with different cell numbers. In 10C embryos increased compared to 7-8C embryos (45.8%, 33.3% vs. 11.1%, respectively. In ≥5C embryos, FR and DC significantly reduced developmental potential, whereas 10C. In NB embryos, the cell cycle elongation or shortening was the main cause for abnormally low or high cell number, respectively. After excluding embryos with abnormal division behaviors, the developmental potential, implantation rate and live birth rate of day 3 embryos increased with cell number.

  20. Through the Looking Glass: Time-lapse Microscopy and Longitudinal Tracking of Single Cells to Study Anti-cancer Therapeutics.

    Science.gov (United States)

    Burke, Russell T; Orth, James D

    2016-05-14

    The response of single cells to anti-cancer drugs contributes significantly in determining the population response, and therefore is a major contributing factor in the overall outcome. Immunoblotting, flow cytometry and fixed cell experiments are often used to study how cells respond to anti-cancer drugs. These methods are important, but they have several shortcomings. Variability in drug responses between cancer and normal cells, and between cells of different cancer origin, and transient and rare responses are difficult to understand using population averaging assays and without being able to directly track and analyze them longitudinally. The microscope is particularly well suited to image live cells. Advancements in technology enable us to routinely image cells at a resolution that enables not only cell tracking, but also the observation of a variety of cellular responses. We describe an approach in detail that allows for the continuous time-lapse imaging of cells during the drug response for essentially as long as desired, typically up to 96 hr. Using variations of the approach, cells can be monitored for weeks. With the employment of genetically encoded fluorescent biosensors numerous processes, pathways and responses can be followed. We show examples that include tracking and quantification of cell growth and cell cycle progression, chromosome dynamics, DNA damage, and cell death. We also discuss variations of the technique and its flexibility, and highlight some common pitfalls.

  1. Comparative effects of ionizing radiation on cycle time and mitotic duration. A time-lapse cinematography study

    International Nuclear Information System (INIS)

    D'Hooghe, M.C.; Hemon, D.; Valleron, A.J.; Malaise, E.P.

    1980-01-01

    The effects of 60 Co γ rays on the length of the intermitotic period, the duration of mitosis, and the division probability of EMT6 cells have been studied in vitro using time-lapse cinematography. Irradiation increases the duration of the mitosis and of the cycle in comparable proportions: both parameters are practically doubled by a dose of 10 Gy. When daughters of irradiated cells die, the mitotic delay and lengthening of mitosis of their mother cells are longer than average. Mitotic delay and lengthening of mitosis depend on the age of cells at the moment of irradiation. The mitotic delay increases progressively when cells are irradiated during the first 8 h of their cycle (i.e., before the transition point), whereas mitosis is slightly prolonged. On the other hand, when the cells are irradiated after this transition point the mitotic delay decreases markedly, whereas the lengthening of mitosis increases sharply. These results tend to indicate that two different mechanisms are responsible for mitotic delay and prolongation of mitosis observed after irradiation

  2. Technical note: Stage and water width measurement of a mountain stream using a simple time-lapse camera

    Directory of Open Access Journals (Sweden)

    P. Leduc

    2018-01-01

    Full Text Available Remote sensing applied to river monitoring adds complementary information useful for understanding the system behaviour. In this paper, we present a method for visual stage gauging and water surface width measurement using a ground-based time-lapse camera and a fully automatic image analysis algorithm for flow monitoring at a river cross section of a steep, bouldery channel. The remote stage measurement was coupled with a water level logger (pressure transducer on site and shows that the image-based method gives a reliable estimate of the water height variation and daily flow record when validated against the pressure transducer (R = 0.91. From the remotely sensed pictures, we also extracted the water width and show that it is possible to correlate water surface width and stage. The images also provide valuable ancillary information for interpreting and understanding flow hydraulics and site weather conditions. This image-based gauging method is a reliable, informative and inexpensive alternative or adjunct to conventional stage measurement especially for remote sites.

  3. Comparative effects of ionizing radiation on cycle time and mitotic duration. A time-lapse cinematography study

    Energy Technology Data Exchange (ETDEWEB)

    D' Hooghe, M.C. (Institut de Recherches sur le Cancer, Lille, France); Hemon, D.; Valleron, A.J.; Malaise, E.P.

    1980-03-01

    The effects of /sup 60/Co ..gamma.. rays on the length of the intermitotic period, the duration of mitosis, and the division probability of EMT6 cells have been studied in vitro using time-lapse cinematography. Irradiation increases the duration of the mitosis and of the cycle in comparable proportions: both parameters are practically doubled by a dose of 10 Gy. When daughters of irradiated cells die, the mitotic delay and lengthening of mitosis of their mother cells are longer than average. Mitotic delay and lengthening of mitosis depend on the age of cells at the moment of irradiation. The mitotic delay increases progressively when cells are irradiated during the first 8 h of their cycle (i.e., before the transition point), whereas mitosis is slightly prolonged. On the other hand, when the cells are irradiated after this transition point the mitotic delay decreases markedly, whereas the lengthening of mitosis increases sharply. These results tend to indicate that two different mechanisms are responsible for mitotic delay and prolongation of mitosis observed after irradiation.

  4. The sexual phase of the diatom Pseudo-nitzschia multistriata: cytological and time-lapse cinematography characterization.

    Science.gov (United States)

    Scalco, Eleonora; Amato, Alberto; Ferrante, Maria Immacolata; Montresor, Marina

    2016-11-01

    Pseudo-nitzschia is a thoroughly studied pennate diatom genus for ecological and biological reasons. Many species in this genus, including Pseudo-nitzschia multistriata, can produce domoic acid, a toxin responsible for amnesic shellfish poisoning. Physiological, phylogenetic and biological features of P. multistriata were studied extensively in the past. Life cycle stages, including the sexual phase, fundamental in diatoms to restore the maximum cell size and avoid miniaturization to death, have been well described for this species. P. multistriata is heterothallic; sexual reproduction is induced when strains of opposite mating type are mixed, and proceeds with cells producing two functionally anisogamous gametes each; however, detailed cytological information for this process is missing. By means of confocal laser scanning microscopy and nuclear staining, we followed the nuclear fate during meiosis, and using time-lapse cinematography, we timed every step of the sexual reproduction process from mate pairing to initial cell hatching. The present paper depicts cytological aspects during gametogenesis in P. multistriata, shedding light on the chloroplast behaviour during sexual reproduction, finely describing the timing of the sexual phases and providing reference data for further studies on the molecular control of this fundamental process.

  5. Seismic Velocity Structure of the Pacific Upper Mantle in the NoMelt Region from Finite-Frequency Traveltime Tomography

    Science.gov (United States)

    Hung, S. H.; Lin, P. Y.; Gaherty, J. B.; Russell, J. B.; Jin, G.; Collins, J. A.; Lizarralde, D.; Evans, R. L.; Hirth, G.

    2017-12-01

    Surface wave dispersion and magnetotelluric survey from the NoMelt Experiment conducted on 70 Ma central Pacific seafloor revealed an electrically resistive, high shear wave velocity lid of 80 km thick underlain by a non-highly conductive, low-velocity layer [Sarafian et al., 2015; Lin et al., 2016]. The vertical structure of the upper mantle consistent with these observational constraints suggests a plausible convection scenario, where the seismically fast, dehydrated lithosphere preserving very strong fossil spreading fabric moves at a constant plate speed over the hydrated, melt-free athenospheric mantle with the presence of either pressure-driven return flow or thermally-driven small scale circulation. To explore 3-D variations in compressional shear wave velocities related to the lithospheric and asthenospheric mantle dynamics, we employ a multichannel cross correlation method to measure relative traveltime residuals based on the vertical P and traverse S waveforms filtered at 10-33 s from telseismic earthquakes at epicentral distance between 30 and 98 degrees. The obtained P and S residuals show on average peak-to-peak variations of ±0.5 s and ±1 s, respectively, across the NoMelt OBS array. Particularly, the P residuals for most of the events display an asymmetrical pattern with respect to an axis oriented nearly N-S to NE-SW through the array. Preliminary ray-based P tomography results reveal similar asymmetric variations in the uppermost 100 km mantle. To verify the resulting structural features, we will further perform both the P and S traveltime tomography and resolution tests based on a multiscale finite-frequency approach which properly takes into account both the 3D off-path sensitivities of the measured residuals and data-adaptive resolution of the model.

  6. Calibration of Seismic Attributes for Reservoir Characterization

    Energy Technology Data Exchange (ETDEWEB)

    Wayne D. Pennington

    2002-09-29

    The project, "Calibration of Seismic Attributes for Reservoir Characterization," is now complete. Our original proposed scope of work included detailed analysis of seismic and other data from two to three hydrocarbon fields; we have analyzed data from four fields at this level of detail, two additional fields with less detail, and one other 2D seismic line used for experimentation. We also included time-lapse seismic data with ocean-bottom cable recordings in addition to the originally proposed static field data. A large number of publications and presentations have resulted from this work, inlcuding several that are in final stages of preparation or printing; one of these is a chapter on "Reservoir Geophysics" for the new Petroleum Engineering Handbook from the Society of Petroleum Engineers. Major results from this project include a new approach to evaluating seismic attributes in time-lapse monitoring studies, evaluation of pitfalls in the use of point-based measurements and facies classifications, novel applications of inversion results, improved methods of tying seismic data to the wellbore, and a comparison of methods used to detect pressure compartments. Some of the data sets used are in the public domain, allowing other investigators to test our techniques or to improve upon them using the same data. From the public-domain Stratton data set we have demonstrated that an apparent correlation between attributes derived along 'phantom' horizons are artifacts of isopach changes; only if the interpreter understands that the interpretation is based on this correlation with bed thickening or thinning, can reliable interpretations of channel horizons and facies be made. From the public-domain Boonsville data set we developed techniques to use conventional seismic attributes, including seismic facies generated under various neural network procedures, to subdivide regional facies determined from logs into productive and non-productive subfacies, and we

  7. CALIBRATION OF SEISMIC ATTRIBUTES FOR RESERVOIR CHARACTERIZATION

    Energy Technology Data Exchange (ETDEWEB)

    Wayne D. Pennington; Horacio Acevedo; Aaron Green; Joshua Haataja; Shawn Len; Anastasia Minaeva; Deyi Xie

    2002-10-01

    The project, ''Calibration of Seismic Attributes for Reservoir Calibration,'' is now complete. Our original proposed scope of work included detailed analysis of seismic and other data from two to three hydrocarbon fields; we have analyzed data from four fields at this level of detail, two additional fields with less detail, and one other 2D seismic line used for experimentation. We also included time-lapse seismic data with ocean-bottom cable recordings in addition to the originally proposed static field data. A large number of publications and presentations have resulted from this work, including several that are in final stages of preparation or printing; one of these is a chapter on ''Reservoir Geophysics'' for the new Petroleum Engineering Handbook from the Society of Petroleum Engineers. Major results from this project include a new approach to evaluating seismic attributes in time-lapse monitoring studies, evaluation of pitfalls in the use of point-based measurements and facies classifications, novel applications of inversion results, improved methods of tying seismic data to the wellbore, and a comparison of methods used to detect pressure compartments. Some of the data sets used are in the public domain, allowing other investigators to test our techniques or to improve upon them using the same data. From the public-domain Stratton data set we have demonstrated that an apparent correlation between attributes derived along ''phantom'' horizons are artifacts of isopach changes; only if the interpreter understands that the interpretation is based on this correlation with bed thickening or thinning, can reliable interpretations of channel horizons and facies be made. From the public-domain Boonsville data set we developed techniques to use conventional seismic attributes, including seismic facies generated under various neural network procedures, to subdivide regional facies determined from logs into

  8. Using the automized system ''section'' to forecast velocity sections using data on borehole velocity measurement and seismic field prospecting

    Energy Technology Data Exchange (ETDEWEB)

    Dorman, M.I.; Gein, F.F.; Zubairov, F.B.

    1981-01-01

    A system of automated processing of seismic data is examined which makes it possible to set up rate functions at arbitrary points of a seismic prospecting section or at points conciding with boreholes in which rate measurements have not been completed. The basis for the forecasting method is data on seismic well logging investigations, seismic prospecting and some indirect observations on sections. The bases of a procedure realizing a forecasting method are set forth, as are those requirements which satisfy the system as a whole. The results of using the ''section'' system in a terrestrial section of Western Siberia are set forth.

  9. Multicomponent seismic applications in coalbed methane development

    Energy Technology Data Exchange (ETDEWEB)

    Lawton, D.; Trend, S. [Calgary Univ., AB (Canada). Dept. of Geology and Geophysics

    2004-07-01

    Seismic applications for coalbed methane (CBM) development are used to address the following challenges: lateral continuity of coal zones; vertical continuity of coal seams; permeability of cleats and fractures; coal quality and gas content; wet versus dry coal zones; and, monitoring storage of greenhouse gases. This paper presented a brief description of existing seismic programs, including 2-D and 3-D surface seismic surveys; multicomponent seismic surveys; vertical seismic profiles; cross-well seismic surveys; and, time-lapse seismic surveys. A comparative evaluation of their use in the Horseshoe Canyon Formation and the Ardley Formation was presented. The study showed that variations in reservoir properties resulting from gas production and dewatering can be effectively imaged using seismic surveys. Seismic surveys are useful in reservoir management, monitoring sweep efficiency during enhanced natural gas from coal (NGC) production, monitoring disposal of produced water and verifying storage of carbon dioxide for carbon credits. tabs., figs.

  10. 2D Time-lapse Resistivity Monitoring of an Organic Produced Gas Plume in a Landfill using ERT.

    Science.gov (United States)

    Amaral, N. D.; Mendonça, C. A.; Doherty, R.

    2014-12-01

    This project has the objective to study a landfill located on the margins of Tietê River, in São Paulo, Brazil, using the electroresistivity tomography method (ERT). Due to huge organic matter concentrations in the São Paulo Basin quaternary sediments, there is subsurface depth related biogas accumulation (CH4 and CO2), induced by anaerobic degradation of the organic matter. 2D resistivity sections were obtained from a test area since March 2012, a total of 7 databases, being the last one dated from October 2013. The studied line has the length of 56m, the electrode interval is of 2m. In addition, there are two boreholes along the line (one with 3 electrodes and the other one with 2) in order to improve data quality and precision. The boreholes also have a multi-level sampling system that indicates the fluid (gas or water) presence in relation to depth. With our results it was possible to map the gas plume position and its area of extension in the sections as it is a positive resistivity anomaly, with the gas level having approximately 5m depth. With the time-lapse analysis (Matlab script) between the obtained 2D resistivity sections from the site, it was possible to map how the biogas volume and position change in the landfill in relation to time. Our preliminary results show a preferential gas pathway through the subsurface studied area. A consistent relation between the gas depth and obtained microbiological data from archea and bacteria population was also observed.

  11. SEGMENTATION OF ENVIRONMENTAL TIME LAPSE IMAGE SEQUENCES FOR THE DETERMINATION OF SHORE LINES CAPTURED BY HAND-HELD SMARTPHONE CAMERAS

    Directory of Open Access Journals (Sweden)

    M. Kröhnert

    2017-09-01

    Full Text Available The relevance of globally environmental issues gains importance since the last years with still rising trends. Especially disastrous floods may cause in serious damage within very short times. Although conventional gauging stations provide reliable information about prevailing water levels, they are highly cost-intensive and thus just sparsely installed. Smartphones with inbuilt cameras, powerful processing units and low-cost positioning systems seem to be very suitable wide-spread measurement devices that could be used for geo-crowdsourcing purposes. Thus, we aim for the development of a versatile mobile water level measurement system to establish a densified hydrological network of water levels with high spatial and temporal resolution. This paper addresses a key issue of the entire system: the detection of running water shore lines in smartphone images. Flowing water never appears equally in close-range images even if the extrinsics remain unchanged. Its non-rigid behavior impedes the use of good practices for image segmentation as a prerequisite for water line detection. Consequently, we use a hand-held time lapse image sequence instead of a single image that provides the time component to determine a spatio-temporal texture image. Using a region growing concept, the texture is analyzed for immutable shore and dynamic water areas. Finally, the prevalent shore line is examined by the resultant shapes. For method validation, various study areas are observed from several distances covering urban and rural flowing waters with different characteristics. Future work provides a transformation of the water line into object space by image-to-geometry intersection.

  12. Impact of Time Lapse on ASCP Board of Certification Medical Laboratory Scientist (MLS) and Medical Laboratory Technician (MLT) Examination Scores.

    Science.gov (United States)

    Brown, Karen A; Fenn, JoAnn P; Freeman, Vicki S; Fisher, Patrick B; Genzen, Jonathan R; Goodyear, Nancy; Houston, Mary Lunz; O'Brien, Mary Elizabeth; Tanabe, Patricia A

    2015-01-01

    Research in several professional fields has demonstrated that delays (time lapse) in taking certification examinations may result in poorer performance by examinees. Thirteen states and/or territories require licensure for laboratory personnel. A core component of licensure is passing a certification exam. Also, many facilities in states that do not require licensure require certification for employment or preferentially hire certified individuals. To analyze examinee performance on the American Society for Clinical Pathology (ASCP) Board of Certification (BOC) Medical Laboratory Scientist (MLS) and Medical Laboratory Technician (MLT) certification examinations to determine whether delays in taking the examination from the time of program completion are associated with poorer performance. We obtained examination data from April 2013 through December 2014 to look for changes in mean (SD) exam scaled scores and overall pass/fail rates. First-time examinees (MLS: n = 6037; MLT, n = 3920) were divided into 3-month categories based on the interval of time between date of program completion and taking the certification exam. We observed significant decreases in mean (SD) scaled scores and pass rates after the first quarter in MLS and MLT examinations for applicants who delayed taking their examination until the second, third, and fourth quarter after completing their training programs. Those who take the ASCP BOC MLS and MLT examinations are encouraged to do so shortly after completion of their educational training programs. Delays in taking an exam are generally not beneficial to the examinee and result in poorer performance on the exam. Copyright© by the American Society for Clinical Pathology (ASCP).

  13. ViCAR: An Adaptive and Landmark-Free Registration of Time Lapse Image Data from Microfluidics Experiments

    Directory of Open Access Journals (Sweden)

    Georges Hattab

    2017-05-01

    Full Text Available In order to understand gene function in bacterial life cycles, time lapse bioimaging is applied in combination with different marker protocols in so called microfluidics chambers (i.e., a multi-well plate. In one experiment, a series of T images is recorded for one visual field, with a pixel resolution of 60 nm/px. Any (semi-automatic analysis of the data is hampered by a strong image noise, low contrast and, last but not least, considerable irregular shifts during the acquisition. Image registration corrects such shifts enabling next steps of the analysis (e.g., feature extraction or tracking. Image alignment faces two obstacles in this microscopic context: (a highly dynamic structural changes in the sample (i.e., colony growth and (b an individual data set-specific sample environment which makes the application of landmarks-based alignments almost impossible. We present a computational image registration solution, we refer to as ViCAR: (Visual (Cues based (Adaptive (Registration, for such microfluidics experiments, consisting of (1 the detection of particular polygons (outlined and segmented ones, referred to as visual cues, (2 the adaptive retrieval of three coordinates throughout different sets of frames, and finally (3 an image registration based on the relation of these points correcting both rotation and translation. We tested ViCAR with different data sets and have found that it provides an effective spatial alignment thereby paving the way to extract temporal features pertinent to each resulting bacterial colony. By using ViCAR, we achieved an image registration with 99.9% of image closeness, based on the average rmsd of 4.10−2 pixels, and superior results compared to a state of the art algorithm.

  14. Single-cell time-lapse analysis of depletion of the universally conserved essential protein YgjD

    Directory of Open Access Journals (Sweden)

    Ackermann Martin

    2011-05-01

    Full Text Available Abstract Background The essential Escherichia coli gene ygjD belongs to a universally conserved group of genes whose function has been the focus of a number of recent studies. Here, we put ygjD under control of an inducible promoter, and used time-lapse microscopy and single cell analysis to investigate the phenotypic consequences of the depletion of YgjD protein from growing cells. Results We show that loss of YgjD leads to a marked decrease in cell size and termination of cell division. The transition towards smaller size occurs in a controlled manner: cell elongation and cell division remain coupled, but cell size at division decreases. We also find evidence that depletion of YgjD leads to the synthesis of the intracellular signaling molecule (pppGpp, inducing a cellular reaction resembling the stringent response. Concomitant deletion of the relA and spoT genes - leading to a strain that is uncapable of synthesizing (pppGpp - abrogates the decrease in cell size, but does not prevent termination of cell division upon YgjD depletion. Conclusions Depletion of YgjD protein from growing cells leads to a decrease in cell size that is contingent on (pppGpp, and to a termination of cell division. The combination of single-cell timelapse microscopy and statistical analysis can give detailed insights into the phenotypic consequences of the loss of essential genes, and can thus serve as a new tool to study the function of essential genes.

  15. Segmentation of Environmental Time Lapse Image Sequences for the Determination of Shore Lines Captured by Hand-Held Smartphone Cameras

    Science.gov (United States)

    Kröhnert, M.; Meichsner, R.

    2017-09-01

    The relevance of globally environmental issues gains importance since the last years with still rising trends. Especially disastrous floods may cause in serious damage within very short times. Although conventional gauging stations provide reliable information about prevailing water levels, they are highly cost-intensive and thus just sparsely installed. Smartphones with inbuilt cameras, powerful processing units and low-cost positioning systems seem to be very suitable wide-spread measurement devices that could be used for geo-crowdsourcing purposes. Thus, we aim for the development of a versatile mobile water level measurement system to establish a densified hydrological network of water levels with high spatial and temporal resolution. This paper addresses a key issue of the entire system: the detection of running water shore lines in smartphone images. Flowing water never appears equally in close-range images even if the extrinsics remain unchanged. Its non-rigid behavior impedes the use of good practices for image segmentation as a prerequisite for water line detection. Consequently, we use a hand-held time lapse image sequence instead of a single image that provides the time component to determine a spatio-temporal texture image. Using a region growing concept, the texture is analyzed for immutable shore and dynamic water areas. Finally, the prevalent shore line is examined by the resultant shapes. For method validation, various study areas are observed from several distances covering urban and rural flowing waters with different characteristics. Future work provides a transformation of the water line into object space by image-to-geometry intersection.

  16. Documentation of normal and leukemic myelopoietic progenitor cells with high-resolution phase-contrast time-lapse cinematography.

    Science.gov (United States)

    Boll, I T

    2001-08-01

    The high-resolution phase-contrast, time-lapse cinematography using oil immersion lenses and 16-mm film demonstrates the kinetic cell events as maturation, locomotion, mitosis, and apoptosis of cells cultivated at 37 degrees C for up to 10 days. 0.5 v/v frozen-thawed sera with presumably high cytokine concentrations were added to the plasma or agar clot. Vital progenitor cells from human bone marrow and blood have a large, bright, unstructured nucleus with a large nucleolus and a narrow rim of cytoplasm (nuclear/cytoplasmic volume ratio = 0.7). Their nuclei are 6-14 micrometer in diameter and double their volume within 8 h. Many (70%) move at a mean speed of 2 micrometer/min, and many (30%) multiply with alpha-2alpha mitoses, generating progenitor cell families. Various disturbances during the course of mitosis lead to the formation of polyploid cells, thereby yielding the megakaryocytic cell line. Some of the progenitor cells undergo asymmetric alpha-alphan mitoses: One of the two initially identical daughter cells remains a progenitor cell in the morphological sense, whereas the other daughter cell - depending on the size of its mother cell - matures in the same culture medium to form a granulocytopoietic, monocytopoietic or erythrocytopoietic cell line. - In acute myeloid leukemias (AML), the blasts and their nuclei are slightly larger than the corresponding progenitor cells and move faster (5 micrometer/min). Symmetric alpha-2alpha mitoses permit unlimited multiplication of the leukemic blasts if contact with cytotoxic lymphocytes does not render them apoptotic. This results in more stromal cells than normal. Granulocytopenia, monocytopenia, and anemia occur due to the genetic impairment of signaling control for asymmetric alpha-alphan mitoses, and thrombocytopenia occurs due to the reduction in polyploidization. Copyright 2001 S. Karger GmbH, Freiburg

  17. Proliferation of pulmonary endothelial cells: time-lapse cinematography of growth to confluence and restitution of monolayer after wounding.

    Science.gov (United States)

    Ryan, U S; Absher, M; Olazabal, B M; Brown, L M; Ryan, J W

    1982-01-01

    A fundamental characteristic of vascular endothelium is that it exists as a monolayer, a condition that must be met in both vascular growth and repair. Maintenance of the monolayer is important both for the exchange of nutrients and for interactions between blood solutes and endothelial enzymes and transport systems. We have used time-lapse cinematography to compare proliferative behavior of bovine pulmonary endothelial cells in (1) establishment of a monolayer from a low-density seed (7.5 X 10(4) cells in a 60 mm dish) and (2) restitution of a confluent monolayer (approx. 2.9 x 10(6) cells in a 60 mm dish) following a mechanical wound (removal of cells from an area 5 x 15 mm by scraping). Culture 2 was not refed after wounding. In culture 2, approx. 30% of the cells accounted for repopulation (confluence in 40 hr). In culture 1, all cells entered into division. Participating cells of culture 2 began division immediately (69 divisions/filmed area in 10 hr, vs. four divisions in culture 1). Interdivision times (IDT) were longer and relatively constant in culture 1 until near confluence; none were less than 10 h, whereas in 2, 24% of the IDT's were less than or equal to 10 hr. Remarkably, IDTs of culture 2 decreased steadily until confluence was re-established. Cell migration in culture 1 was multidirectional while direction of migration in culture 2 was always into the wound area. Mean migration rate (MIG) in culture 2 was related to the site of origin of the cells, those dividing farthest from the unwounded area had fastest MIGs. Neither culture formed more than a single layer of cells. Although the cell kinetics of cultures 1 and 2 differed, the same goal, confluence, was achieved in either case.

  18. Effects of porosity on seismic velocities, elastic moduli and Poisson's ratios of solid materials and rocks

    Directory of Open Access Journals (Sweden)

    Chengbo Yu

    2016-02-01

    Full Text Available The generalized mixture rule (GMR is used to provide a unified framework for describing Young's (E, shear (G and bulk (K moduli, Lame parameter (λ, and P- and S-wave velocities (Vp and Vs as a function of porosity in various isotropic materials such as metals, ceramics and rocks. The characteristic J values of the GMR for E, G, K and λ of each material are systematically different and display consistent correlations with the Poisson's ratio of the nonporous material (ν0. For the materials dominated by corner-shaped pores, the fixed point at which the effective Poisson's ratio (ν remains constant is at ν0 = 0.2, and J(G > J(E > J(K > J(λ and J(G  0.2 and ν0  J(Vp and J(Vs  0.2 and ν0  0.2 and ν0 = 0.2, respectively. For natural rocks containing thin-disk-shaped pores parallel to mineral cleavages, grain boundaries and foliation, however, the ν fixed point decreases nonlinearly with decreasing pore aspect ratio (α: width/length. With increasing depth or pressure, cracks with smaller α values are progressively closed, making the ν fixed point rise and finally reach to the point at ν0 = 0.2.

  19. Modeling and inversion Matlab algorithms for resistivity, induced polarization and seismic data

    Science.gov (United States)

    Karaoulis, M.; Revil, A.; Minsley, B. J.; Werkema, D. D.

    2011-12-01

    M. Karaoulis (1), D.D. Werkema (3), A. Revil (1,2), A., B. Minsley (4), (1) Colorado School of Mines, Dept. of Geophysics, Golden, CO, USA. (2) ISTerre, CNRS, UMR 5559, Université de Savoie, Equipe Volcan, Le Bourget du Lac, France. (3) U.S. EPA, ORD, NERL, ESD, CMB, Las Vegas, Nevada, USA . (4) USGS, Federal Center, Lakewood, 10, 80225-0046, CO. Abstract We propose 2D and 3D forward modeling and inversion package for DC resistivity, time domain induced polarization (IP), frequency-domain IP, and seismic refraction data. For the resistivity and IP case, discretization is based on rectangular cells, where each cell has as unknown resistivity in the case of DC modelling, resistivity and chargeability in the time domain IP modelling, and complex resistivity in the spectral IP modelling. The governing partial-differential equations are solved with the finite element method, which can be applied to both real and complex variables that are solved for. For the seismic case, forward modeling is based on solving the eikonal equation using a second-order fast marching method. The wavepaths are materialized by Fresnel volumes rather than by conventional rays. This approach accounts for complicated velocity models and is advantageous because it considers frequency effects on the velocity resolution. The inversion can accommodate data at a single time step, or as a time-lapse dataset if the geophysical data are gathered for monitoring purposes. The aim of time-lapse inversion is to find the change in the velocities or resistivities of each model cell as a function of time. Different time-lapse algorithms can be applied such as independent inversion, difference inversion, 4D inversion, and 4D active time constraint inversion. The forward algorithms are benchmarked against analytical solutions and inversion results are compared with existing ones. The algorithms are packaged as Matlab codes with a simple Graphical User Interface. Although the code is parallelized for multi

  20. Mantle viscosity structure constrained by joint inversions of seismic velocities and density

    Science.gov (United States)

    Rudolph, M. L.; Moulik, P.; Lekic, V.

    2017-12-01

    The viscosity structure of Earth's deep mantle affects the thermal evolution of Earth, the ascent of mantle upwellings, sinking of subducted oceanic lithosphere, and the mixing of compositional heterogeneities in the mantle. Modeling the long-wavelength dynamic geoid allows us to constrain the radial viscosity profile of the mantle. Typically, in inversions for the mantle viscosity structure, wavespeed variations are mapped into density variations using a constant- or depth-dependent scaling factor. Here, we use a newly developed joint model of anisotropic Vs, Vp, density and transition zone topographies to generate a suite of solutions for the mantle viscosity structure directly from the seismologically constrained density structure. The density structure used to drive our forward models includes contributions from both thermal and compositional variations, including important contributions from compositionally dense material in the Large Low Velocity Provinces at the base of the mantle. These compositional variations have been neglected in the forward models used in most previous inversions and have the potential to significantly affect large-scale flow and thus the inferred viscosity structure. We use a transdimensional, hierarchical, Bayesian approach to solve the inverse problem, and our solutions for viscosity structure include an increase in viscosity below the base of the transition zone, in the shallow lower mantle. Using geoid dynamic response functions and an analysis of the correlation between the observed geoid and mantle structure, we demonstrate the underlying reason for this inference. Finally, we present a new family of solutions in which the data uncertainty is accounted for using covariance matrices associated with the mantle structure models.

  1. Retrieving robust noise-based seismic velocity changes from sparse data sets: synthetic tests and application to Klyuchevskoy volcanic group (Kamchatka)

    Science.gov (United States)

    Gómez-García, C.; Brenguier, F.; Boué, P.; Shapiro, N. M.; Droznin, D. V.; Droznina, S. Ya; Senyukov, S. L.; Gordeev, E. I.

    2018-05-01

    Continuous noise-based monitoring of seismic velocity changes provides insights into volcanic unrest, earthquake mechanisms and fluid injection in the sub-surface. The standard monitoring approach relies on measuring travel time changes of late coda arrivals between daily and reference noise cross-correlations, usually chosen as stacks of daily cross-correlations. The main assumption of this method is that the shape of the noise correlations does not change over time or, in other terms, that the ambient-noise sources are stationary through time. These conditions are not fulfilled when a strong episodic source of noise, such as a volcanic tremor for example, perturbs the reconstructed Green's function. In this paper we propose a general formulation for retrieving continuous time series of noise-based seismic velocity changes without the requirement of any arbitrary reference cross-correlation function. Instead, we measure the changes between all possible pairs of daily cross-correlations and invert them using different smoothing parameters to obtain the final velocity change curve. We perform synthetic tests in order to establish a general framework for future applications of this technique. In particular, we study the reliability of velocity change measurements versus the stability of noise cross-correlation functions. We apply this approach to a complex dataset of noise cross-correlations at Klyuchevskoy volcanic group (Kamchatka), hampered by loss of data and the presence of highly non-stationary seismic tremors.

  2. Bayesian Markov-Chain-Monte-Carlo inversion of time-lapse crosshole GPR data to characterize the vadose zone at the Arrenaes Site, Denmark

    DEFF Research Database (Denmark)

    Scholer, Marie; Irving, James; Zibar, Majken Caroline Looms

    2012-01-01

    We examined to what extent time-lapse crosshole ground-penetrating radar traveltimes, measured during a forced infiltration experiment at the Arreneas field site in Denmark, could help to quantify vadose zone hydraulic properties and their corresponding uncertainties using a Bayesian Markov...... distributions compared with the corresponding priors, which in turn significantly improves knowledge of soil hydraulic properties. Overall, the results obtained clearly demonstrate the value of the information contained in time-lapse GPR data for characterizing vadose zone dynamics.......-chain-Monte-Carlo inversion approach with different priors. The ground-penetrating radar (GPR) geophysical method has the potential to provide valuable information on the hydraulic properties of the vadose zone because of its strong sensitivity to soil water content. In particular, recent evidence has suggested...

  3. Traveltime and waveform tomography analysis of synthetic borehole seismic data based on the CO2SINK project site, Germany

    Science.gov (United States)

    Yang, Can; Fan, Wenfang; Juhlin, Christopher

    2010-05-01

    Time lapse analysis of seismic data is very important for CO2 storage projects. Therefore, we have tested traveltime and waveform tomography methods to detect velocity changes in a CO2 injection reservoir using synthetic time lapse data. The structural model tested is based on the CO2SINK injection site at Ketzin, Germany where CO2 is being injected at about 630-650 m into a saline aquifer. First, we created synthetic time lapse moving source profiling (MSP) data, also known as walkaway profiling. The velocity model used for modeling was based on well logging and lithological information in the injection borehole. Gassmann fluid substitution was used to calculate the reservoir velocity after injection. In this substitution, we assumed a saturation of CO2 of 30%. The model velocity of the reservoir changed from 2750 m/s (before injection) to 2150 m/s (after injection). A 2D finite difference code available in Seismic Unix (www.cwp.mines.edu) was used. 60 source points were distributed along a surface line. The distance from the injection well was between 150m and 858m, with an interval of 12m. We recorded 21 channels at receiver depths from 470m to 670m, with an interval of 10m. The injection layer was assumed to be between 629m and 650m depth. The wavelet used for the synthetic data was a Gaussian derivative with an average frequency of 60Hz. Then first arrivals were picked on both data sets and used as input data for traveltime tomography. For traveltime tomography, the PS_tomo program was used. Since no data were recorded above 470m, the initial velocity model used above this depth was the true velocity model. Below 470m, the initial velocity model increases linearly from 3000m/s to 3250m/s. After inversion, the reservoir velocity and an anhydrite layer (high velocity layer) can be seen clearly in the final inverted velocity models. Using these velocity models as starting models, we performed waveform tomography in the frequency domain using a program supplied by

  4. New tomographic images of P- , S- wave velocity and Q on the Philippine Sea Slab beneath Tokyo: Implication to seismotectonics and seismic hazard in the Tokyo metropolitan region

    Science.gov (United States)

    Hirata, Naoshi; Sakai, Shin'ichi; Nakagawa, Shigeki; Panayotopoulos, Yannis; Ishikawa, Masahiro; Sato, Hiroshi; Kasahara, Keiji; Kimura, Hisanor; Honda, Ryou

    2013-04-01

    The Central Disaster Management Council of Japan estimates the next great M7+ earthquake in the Tokyo metropolitan region will cause 11,000 fatalities and 112 trillion yen (1 trillion US) economic loss at worst case if it occur beneath northern Tokyo bay with M7.3. However, the estimate is based on a source fault model by conventional studies about the PSP geometry. To evaluate seismic hazard due to the great quake we need to clarify the geometry of PSP and also the Pacific palate (PAP) that subducs beneath PSP. We identify those plates with use of seismic tomography and available deep seismic reflection profiling and borehole data in southern Kanto area. We deployed about 300 seismic stations in the greater Tokyo urban region under the Special Project for Earthquake Disaster Mitigation in Tokyo Metropolitan Area. We obtain clear P- and S- wave velocity (Vp and Vs) and Q tomograms which show a clear image of PSP and PAP. A depth to the top of PSP, 20 to 30 kilometer beneath northern part of Tokyo bay, is about 10 km shallower than previous estimates based on the distribution of seismicity (Ishida, 1992). This shallower plate geometry changes estimations of strong ground motion for seismic hazards analysis within the Tokyo region. Based on elastic wave velocities of rocks and minerals, we interpreted the tomographic images as petrologic images. Tomographic images revealed the presence of two stepwise velocity increase of the top layer of the subducting PSP slab. Rock velocity data reveals that subducting PSP crust transforms from blueschists to amphibolites at depth of 30km and amphibolites to eclogites at depth of 50km, which suggest that dehydration reactions occurs in subducting crust of basaltic compositions during prograde metamorphism and water is released from the subducting PSP crust. Tomograms show evidence for a low-velocity zone (LVZ) beneath the area just north of Tokyo bay. A Q tomogram show a low Q zone in PSP slab. We interpret the LVZ as a

  5. Probing dynamic hydrologic system of slowly-creeping landslides with passive seismic imaging: A comprehensive landslide monitoring site at Lantai, Ilan area in Taiwan

    Science.gov (United States)

    Huang, H. H.; Hsu, Y. J.; Kuo, C. Y.; Chen, C. C.; Kuo, L. W.; Chen, R. F.; Lin, C. R.; Lin, P. P.; Lin, C. W.; Lin, M. L.; Wang, K. L.

    2017-12-01

    A unique landslide monitoring project integrating multidisciplinary geophysics experiments such as GPS, inclinometer, piezometer, and spontaneous potential log has been established at Lantai, Ilan area to investigating the possible detachment depth range and the physical mechanism of a slowly creeping landslide. In parallel with this, a lately deployed local seismic network also lends an opportunity to employ the passive seismic imaging technique to detect the time-lapse changes of seismic velocity in and around the landslide area. Such technique that retrieves Green's functions by cross-correlation of continuous ambient noise has opened new opportunities to seismologically monitoring the environmental and tectonic events such as ground water variation, magma intrusion under volcanos, and co-seismic medium damage in recent years. Integrating these geophysical observations, we explore the primary controls of derived seismic velocity changes and especially the hydrological response of the landslide to the passage of Megi typhoon in the last September 2016, which could potentially further our understanding of the dynamic system of landslides and in turn help the hazard mitigation.

  6. Deep Downhole Seismic Testing at the Waste Treatment Plant Site, Hanford, WA. Volume V S-Wave Measurements in Borehole C4996 Seismic Records, Wave-Arrival Identifications and Interpreted S-Wave Velocity Profile.

    Energy Technology Data Exchange (ETDEWEB)

    Stokoe, Kenneth H.; Li, Song Cheng; Cox, Brady R.; Menq, Farn-Yuh

    2007-06-06

    Velocity measurements in shallow sediments from ground surface to approximately 370 to 400 feet bgs were collected by Redpath Geophysics using impulsive S- and P-wave seismic sources (Redpath 2007). Measurements below this depth within basalt and sedimentary interbeds were made by UTA between October and December 2006 using the T-Rex vibratory seismic source in each of the three boreholes. Results of these measurements including seismic records, wave-arrival identifications and interpreted velocity profiles are presented in the following six volumes: I. P-Wave Measurements in Borehole C4993 II. P-Wave Measurements in Borehole C4996 III. P-Wave Measurements in Borehole C4997 IV. S-Wave Measurements in Borehole C4993 V. S-Wave Measurements in Borehole C4996 VI. S-Wave Measurements in Borehole C4997 In this volume (V), all S-wave measurements are presented that were performed in Borehole C4996 at the WTP with T-Rex as the seismic source and the Lawrence Berkeley National Laboratory (LBNL) 3-D wireline geophone as the at-depth borehole receiver.

  7. Deep Downhole Seismic Testing at the Waste Treatment Plant Site, Hanford, WA. Volume VI S-Wave Measurements in Borehole C4997 Seismic Records, Wave-Arrival Identifications and Interpreted S-Wave Velocity Profile.

    Energy Technology Data Exchange (ETDEWEB)

    Stokoe, Kenneth H.; Li, Song Cheng; Cox, Brady R.; Menq, Farn-Yuh

    2007-06-06

    Velocity measurements in shallow sediments from ground surface to approximately 370 to 400 feet bgs were collected by Redpath Geophysics using impulsive S- and P-wave seismic sources (Redpath 2007). Measurements below this depth within basalt and sedimentary interbeds were made by UTA between October and December 2006 using the T-Rex vibratory seismic source in each of the three boreholes. Results of these measurements including seismic records, wave-arrival identifications and interpreted velocity profiles are presented in the following six volumes: I. P-Wave Measurements in Borehole C4993 II. P-Wave Measurements in Borehole C4996 III. P-Wave Measurements in Borehole C4997 IV. S-Wave Measurements in Borehole C4993 V. S-Wave Measurements in Borehole C4996 VI. S-Wave Measurements in Borehole C4997 In this volume (VI), all S-wave measurements are presented that were performed in Borehole C4997 at the WTP with T-Rex as the seismic source and the Lawrence Berkeley National Laboratory (LBNL) 3-D wireline geophone as the at-depth borehole receiver.

  8. Seismic Velocity/Temperature Correlations and a Possible New Geothermometer: Insights from Exploration of a High-Temperature Geothermal System on Montserrat, West Indies

    Directory of Open Access Journals (Sweden)

    Graham Alexander Ryan

    2014-10-01

    Full Text Available In 2013, two production wells were drilled into a geothermal reservoir on Montserrat, W.I. (West Indies Drilling results confirmed the main features of a previously developed conceptual model. The results confirm that below ~220 °C there is a negative correlation between reservoir temperature and seismic velocity anomaly. However, above ~220 °C there is a positive correlation. We hypothesise that anomalous variations in seismic velocity within the reservoir are controlled to first order by the hydrothermal mineral assemblage. This study suggests a new geophysical thermometer which can be used to estimate temperatures in three dimensions with unprecedented resolution and to indicate the subsurface fluid pathways which are the target of geothermal exploitation.

  9. New evidence for the serpentinization of the Palaeozoic basement of southeastern Sicily from joint 3-D seismic velocity and attenuation tomography

    Science.gov (United States)

    Giampiccolo, E.; Brancato, A.; Manuella, F. C.; Carbone, S.; Gresta, S.; Scribano, V.

    2017-12-01

    In this study, we derived the first 3-D P-wave seismic attenuation images (QP) as well as new 3-D VP and VP/VS models for the crust in southeastern Sicily. We used a large data set of local seismic events occurring in the time span 1994-2013. The results of this tomographic study have important implications on the seismic behaviour of the region. Based on velocity and attenuation images, we identified distinct volumes characterized by different fluid content, which correlate well with seismicity distribution. Moreover, the obtained velocity and attenuation tomographies help us to provide a more complete picture of the crustal structure of the area. High VP, high QP and high VP/VS values have been obtained in the crustal basement, below a depth of 8 km, and may be interpreted as due to the presence of serpentinized peridotites. Accordingly, the new model for the degree of serpentinization, retrieved from VP values, shows that the basement has an average serpentinization value of 96 ± 3 vol.% at 8 km, decreasing to 44 ± 5 vol.% at about 18-20 km.

  10. Two types of SDR recognised in pre-stack velocity analysis of ultra-long-offset seismic reflection data in the South Atlantic

    Science.gov (United States)

    Collier, J.; McDermott, C.; Lonergan, L.; McDermott, K.; Bellingham, P.

    2017-12-01

    Our understanding of continental breakup at volcanic margins has lagged behind that of non-volcanic margins in recent years. This is largely due to seismic imaging problems caused by the presence of thick packages of Seaward-Dipping Reflectors (SDRs) in the continent-ocean transition zone. These packages consist of interbedded tholeiitic lava flows, volcanic tuffs and terrestrial sediment that results in scattering, peg-leg multiples and defocusing of seismic energy. Here we analyse three ultra-long-offset (10.2 km), wide-bandwidth (5-100 Hz) seismic reflection profiles acquired by ION-GXT offshore South America during 2009-12 to gain new insights into the velocity structure of the SDRs and hence pattern of magmatism during continental breakup. We observe two seismic velocity patterns within the SDRs. The most landward packages show high velocity anomaly "bulls-eyes" of up to 1 km s-1. These highs occur where the stacked section shows them to thicken at the down-dip end of individual packages that are bounded by faults. All lines show 5-6 velocity highs spaced approximately 10 km apart. We interpret the velocity bulls-eyes as depleted mafic or ultramafic bodies that fed the sub-aerial tholeiitic lava flows during continental stretching. Similar relationships have been observed in outcrop onshore but have not been previously demonstrated in seismic data. The bulls-eye packages pass laterally into SDR packages that show no velocity highs. These packages are not associated with faulting and become more extensive going north towards the impact point of the Tristan da Cunha hotspot. This second type of SDR coincides with linear magnetic anomalies. We interpret these SDRs as the products of sub-aerial oceanic spreading similar to those seen on Iceland and described in the classic "Hinz model" and marine geophysical literature. Our work demonstrates that these SDRs are preceded by ones generated during an earlier phase of mechanical thinning of the continental crust. The

  11. Seismic velocity structure and spatial distribution of reflection intensity off the Boso Peninsula, Central Japan, revealed by an ocean bottom seismographic experiment

    Science.gov (United States)

    Kono, Akihiro; Sato, Toshinori; Shinohara, Masanao; Mochizuki, Kimihiro; Yamada, Tomoaki; Uehira, Kenji; Shinbo, Takashi; Machida, Yuuya; Hino, Ryota; Azuma, Ryosuke

    2016-04-01

    Off the Boso Peninsula, central Japan, where the Sagami Trough is in the south and the Japan Trench is in the east, there is a triple junction where the Pacific plate (PAC), the Philippine Sea plate (PHS) and the Honshu island arc (HIA) meet each other. In this region, the PAC subducts beneath the PHS and the HIA, and the PHS subducts beneath the HIA. Due to the subduction of 2 oceanic plates, numerous seismic events took place in the past. In order to understand these events, it is important to image structure of these plates. Hence, many researchers attempted to reveal the substructure from natural earthquakes and seismic experiments. Because most of the seismometers are placed inland area and the regular seismicity off Boso is inactive, it is difficult to reveal the precise substructure off Boso area using only natural earthquakes. Although several marine seismic experiments using active sources were conducted, vast area remains unclear off Boso Peninsula. In order to improve the situation, a marine seismic experiment, using airgun as an active source, was conducted from 30th July to 4th of August, 2009. The survey line has 216 km length and 20 Ocean Bottom Seismometers (OBSs) were placed on it. We estimated 2-D P-wave velocity structure from the airgun data using the PMDM (Progressive Model Development Method; Sato and Kenett, 2000) and the FAST (First Arrival Seismic Tomography ; Zelt and Barton, 1998). Furthermore, we identified the probable reflection phases from the data and estimated the location of reflectors using Travel time mapping method (Fujie et al. 2006). We found some reflection phases from the data, and the reflectors are located near the region where P-wave velocity is 5.0 km/s. We interpret that the reflectors indicate the plate boundary between the PHS and the HIA. The variation of the intensity of reflection along the upper surface of PHS seems to be consistent with the result from previous reflection seismic experiment conducted by Kimura et

  12. The Investigation of a Sinkhole Area in Germany by Near-Surface Active Seismic Tomography

    Science.gov (United States)

    Tschache, S.; Becker, D.; Wadas, S. H.; Polom, U.; Krawczyk, C. M.

    2017-12-01

    In November 2010, a 30 m wide and 17 m deep sinkhole occurred in a residential area of Schmalkalden, Germany, which fortunately did not harm humans, but led to damage of buildings and property. Subsequent geoscientific investigations showed that the collapse was naturally caused by the subrosion of sulfates in a depth of about 80 m. In 2012, an early warning system was established including 3C borehole geophones deployed in 50 m depth around the backfilled sinkhole. During the acquisition of two shallow 2D shear wave seismic profiles, the signals generated by a micro-vibrator at the surface were additionally recorded by the four borehole geophones of the early warning system and a VSP probe in a fifth borehole. The travel time analysis of the direct arrivals enhanced the understanding of wave propagation in the area. Seismic velocity anomalies were detected and related to structural seismic images of the 2D profiles. Due to the promising first results, the experiment was further extended by distributing vibration points throughout the whole area around the sinkhole. This time, micro-vibrators for P- and S-wave generation were used. The signals were recorded by the borehole geophones and temporary installed seismometers at surface positions close to the boreholes. The travel times and signal attenuations are evaluated to detect potential instable zones. Furthermore, array analyses are performed. The first results reveal features in the active tomography datasets consistent with structures observed in the 2D seismic images. The advantages of the presented method are the low effort and good repeatability due to the permanently installed borehole geophones. It has the potential to determine P-wave and S-wave velocities in 3D. It supports the interpretation of established investigation methods as 2D surface seismics and VSP. In our further research we propose to evaluate the suitability of the method for the time lapse monitoring of changes in the seismic wave

  13. Seismic Velocity Variation and Evolution of the Upper Oceanic Crust across the Mid-Atlantic Ridge at 1.3°S

    Science.gov (United States)

    Jian, H.; Singh, S. C.

    2017-12-01

    The oceanic crust that covers >70% of the solid earth is formed at mid-ocean ridges, but get modified as it ages. Understanding the evolution of oceanic crust requires investigations of crustal structures that extend from zero-age on the ridge axis to old crust. In this study, we analyze a part of a 2000-km-long seismic transect that crosses the Mid-Atlantic Ridge segment at 1.3°S, south of the Chain transform fault. The seismic data were acquired using a 12-km-long multi-sensor streamer and dense air-gun shots. Using a combination of downward continuation and seismic tomography methods, we have derived a high-resolution upper crustal velocity structure down to 2-2.5 km depth below the seafloor, from the ridge axis to 3.5 Ma on both sides of the ridge axis. The results demonstrate that velocities increase at all depths in the upper crust as the crust ages, suggesting that hydrothermal precipitations seal the upper crustal pore spaces. This effect is most significant in layer 2A, causing a velocity increase of 0.5-1 km/s after 1-1.5 Ma, beyond which the velocity increase is very small. Furthermore, the results exhibit a significant decrease in both the frequency and amplitude of the low-velocity anomalies associated with faults beyond 1-1.5 Ma, when faults become inactive, suggesting a linkage between the sealing of fault space and the extinction of hydrothermal activity. Besides, the off-axis velocities are systematically higher on the eastern side of the ridge axis compared to on the western side, suggesting that a higher hydrothermal activity should exist on the outside-corner ridge flank than on the inside-corner flank. While the tomography results shown here cover 0-3.5 Ma crust, the ongoing research will further extend the study area to older crust and also incorporating pre-stack migration and full waveform inversion methods to improve the seismic structure.

  14. Crustal thickness and velocity structure across the Moroccan Atlas from long offset wide-angle reflection seismic data: The SIMA experiment

    Science.gov (United States)

    Ayarza, P.; Carbonell, R.; Teixell, A.; Palomeras, I.; Martí, D.; Kchikach, A.; Harnafi, M.; Levander, A.; Gallart, J.; Arboleya, M. L.; Alcalde, J.; Fernández, M.; Charroud, M.; Amrhar, M.

    2014-05-01

    The crustal structure and topography of the Moho boundary beneath the Atlas Mountains of Morocco has been constrained by a controlled source, wide-angle seismic reflection transect: the SIMA experiment. This paper presents the first results of this project, consisting of an almost 700 km long, high-resolution seismic profile acquired from the Sahara craton across the High and the Middle Atlas and the Rif Mountains. The interpretation of this seismic data set is based on forward modeling by raytracing, and has resulted in a detailed crustal structure and velocity model for the Atlas Mountains. Results indicate that the High Atlas features a moderate crustal thickness, with the Moho located at a minimum depth of 35 km to the S and at around 31 km to the N, in the Middle Atlas. Upper crustal shortening is resolved at depth through a crustal root where the Saharan crust underthrusts the northern Moroccan crust. This feature defines a lower crust imbrication that, locally, places the Moho boundary at ˜40-41 km depth in the northern part of the High Atlas. The P-wave velocity model is characterized by relatively low velocities, mostly in the lower crust and upper mantle, when compared to other active orogens and continental regions. These low deep crustal velocities together with other geophysical observables such as conductivity estimates derived from MT measurements, moderate Bouguer gravity anomaly, high heat flow, and surface exposures of recent alkaline volcanism lead to a model where partial melts are currently emplaced at deep crustal levels and in the upper mantle. The resulting model supports the existence of a mantle upwelling as mechanism that would contribute significantly to sustain the High Atlas topography. However, the detailed Moho geometry deduced in this work should lead to a revision of the exact geometry and position of this mantle feature and will require new modeling efforts.

  15. Estimation of soil hydraulic parameters in the field by integrated hydrogeophysical inversion of time-lapse ground-penetrating radar data

    KAUST Repository

    Jadoon, Khan

    2012-01-01

    An integrated hydrogeophysical inversion approach was used to remotely infer the unsaturated soil hydraulic parameters from time-lapse ground-penetrating radar (GPR) data collected at a fixed location over a bare agricultural field. The GPR model combines a full-waveform solution of Maxwell\\'s equations for three-dimensional wave propaga- tion in planar layered media together with global reflection and transmission functions to account for the antenna and its interactions with the medium. The hydrological simu- lator HYDRUS-1D was used with a two layer single- and dual-porosity model. The radar model was coupled to the hydrodynamic model, such that the soil electrical properties (permitivity and conductivity) that serve as input to the GPR model become a function of the hydrodynamic model output (water content), thereby permiting estimation of the soil hydraulic parameters from the GPR data in an inversion loop. To monitor the soil water con- tent dynamics, time-lapse GPR and time domain reflectometry (TDR) measurements were performed, whereby only GPR data was used in the inversion. Significant effects of water dynamics were observed in the time-lapse GPR data and in particular precipitation and evaporation events were clearly visible. The dual porosity model provided betier results compared to the single porosity model for describing the soil water dynamics, which is sup- ported by field observations of macropores. Furthermore, the GPR-derived water content profiles reconstructed from the integrated hydrogeophysical inversion were in good agree- ment with TDR observations. These results suggest that the proposed method is promising for non-invasive characterization of the shallow subsurface hydraulic properties and moni- toring water dynamics at the field scale. © Soil Science Society of America.

  16. Along-Strike Differences of the Main Himalayan Thrust and Deformation within the Indian Crust: Insights from Seismicity and Seismic Velocities in Bhutan and its Foreland

    Science.gov (United States)

    Diehl, T.; Singer, J.; Hetényi, G.; Kissling, E. H.; Clinton, J. F.

    2015-12-01

    The seismicity of Bhutan is characterized by the apparent lack of great earthquakes and a significantly lower activity compared to most other parts of the Himalayan arc. To better understand the underlying mechanisms of this anomalously low activity and to relate it with possible along-strike differences in the structure of the orogenic belt, a temporary network with up to 38 broadband seismometers was installed in Bhutan between January 2013 and November 2014. In this work we present a catalog of local and regional earthquakes detected and located with the GANSSER network complemented by regional stations in India, Bangladesh, and China. State-of-the-art data analysis and earthquake location procedures were applied to derive a high-precision earthquake catalog of Bhutan and surrounding regions. Focal mechanisms from regional moment tensor inversions and first-motion polarities complement the earthquake catalog. In the vicinity of the Shumar-Kuru Chu Spur in East Bhutan, seismicity forms a moderately dipping structure at about 12 km depth, which we associate with the Main Himalayan Thrust (MHT). North of 27.6°N the dip of the structure steepens, which can be interpreted as a ramp along the MHT. In West Bhutan seismicity occurs at depths of 20 to 40 km and receiver function images indicate that seismicity occurs in the underthrusting Indian crust rather than on the MHT. The highest seismic activity is clustered along the Goalpara Lineament, a dextral NE-SW striking shear zone in southwest Bhutan, which appears to connect to the western edge of the Shillong Plateau in the foreland. Focal depths indicate that this shear zone is located at depths of 20-30 km and therefore in the underthrusting Indian crust. Preliminary results of a 3D local earthquake tomography show substantial differences in the uppermost crust between east and west Bhutan. Consistent with our receiver function images, the results also indicate a thinning of the crustal root towards eastern Bhutan.

  17. Multi-scale mantle structure underneath the Americas from a new tomographic model of seismic shear velocity

    Science.gov (United States)

    Porritt, R. W.; Becker, T. W.; Auer, L.; Boschi, L.

    2017-12-01

    We present a whole-mantle, variable resolution, shear-wave tomography model based on newly available and existing seismological datasets including regional body-wave delay times and multi-mode Rayleigh and Love wave phase delays. Our body wave dataset includes 160,000 S wave delays used in the DNA13 regional tomographic model focused on the western and central US, 86,000 S and SKS delays measured on stations in western South America (Porritt et al., in prep), and 3,900,000 S+ phases measured by correlation between data observed at stations in the IRIS global networks (IU, II) and stations in the continuous US, against synthetic data generated with IRIS Syngine. The surface wave dataset includes fundamental mode and overtone Rayleigh wave data from Schaeffer and Levedev (2014), ambient noise derived Rayleigh wave and Love wave measurements from Ekstrom (2013), newly computed fundamental mode ambient noise Rayleigh wave phase delays for the continuous US up to July 2017, and other, previously published, measurements. These datasets, along with a data-adaptive parameterization utilized for the SAVANI model (Auer et al., 2014), should allow significantly finer-scale imaging than previous global models, rivaling that of regional-scale approaches, under the USArray footprint in the continuous US, while seamlessly integrating into a global model. We parameterize the model for both vertically (vSV) and horizontally (vSH) polarized shear velocities by accounting for the different sensitivities of the various phases and wave types. The resulting, radially anisotropic model should allow for a range of new geodynamic analysis, including estimates of mantle flow induced topography or seismic anisotropy, without generating artifacts due to edge effects, or requiring assumptions about the structure of the region outside the well resolved model space. Our model shows a number of features, including indications of the effects of edge-driven convection in the Cordillera and along

  18. A Two-Radius Circular Array Method: Extracting Independent Information on Phase Velocities of Love Waves From Microtremor Records From a Simple Seismic Array

    Science.gov (United States)

    Tada, T.; Cho, I.; Shinozaki, Y.

    2005-12-01

    We have invented a Two-Radius (TR) circular array method of microtremor exploration, an algorithm that enables to estimate phase velocities of Love waves by analyzing horizontal-component records of microtremors that are obtained with an array of seismic sensors placed around circumferences of two different radii. The data recording may be done either simultaneously around the two circles or in two separate sessions with sensors distributed around each circle. Both Rayleigh and Love waves are present in the horizontal components of microtremors, but in the data processing of our TR method, all information on the Rayleigh waves ends up cancelled out, and information on the Love waves alone are left to be analyzed. Also, unlike the popularly used frequency-wavenumber spectral (F-K) method, our TR method does not resolve individual plane-wave components arriving from different directions and analyze their "vector" phase velocities, but instead directly evaluates their "scalar" phase velocities --- phase velocities that contain no information on the arrival direction of waves --- through a mathematical procedure which involves azimuthal averaging. The latter feature leads us to expect that, with our TR method, it is possible to conduct phase velocity analysis with smaller numbers of sensors, with higher stability, and up to longer-wavelength ranges than with the F-K method. With a view to investigating the capabilities and limitations of our TR method in practical implementation to real data, we have deployed circular seismic arrays of different sizes at a test site in Japan where the underground structure is well documented through geophysical exploration. Ten seismic sensors were placed equidistantly around two circumferences, five around each circle, with varying combinations of radii ranging from several meters to several tens of meters, and simultaneous records of microtremors around circles of two different radii were analyzed with our TR method to produce

  19. Calibration of the seismic velocity structure and understanding of the fault formation in the environs of the Orkney M5.5 earthquake, South Africa

    Science.gov (United States)

    Ogasawara, H.; Manzi, M. S.; Durrheim, R. J.; Ogasawara, H.

    2017-12-01

    In August 2014, the largest seismic event (M5.5) to occur in a South African gold mining district took place near Orkney. The M5.5 event and aftershocks were recorded by strainmeters installed at 3 km depth hundreds of meters above the M5.5 fault, 46 in-mine 4.5Hz triaxial geophone stations at depths of 2-3 km within a hypocentral radius of 2-3 km, and 17 surface strong motion stations (South African Seismograph Network; SANSN) within an epicentral radius of 25 km. Aftershocks were distributed on a nearly vertical plane striking NNW-SSE. The upper edge of this fault was hundreds of meters below the deepest level of the mine. ICDP approved a project "Drilling into seismogenic zones of M2.0-5.5 earthquakes in South African gold mines" to elucidate the details of the events (DSeis; Yabe et al. invited talk in S020 in this AGU). On 1 August 2017 drilling was within a few hundreds of meters of intersecting the M5.5 fault zone. To locate the drilling target accurately it is very important to determine the velocity structure between the seismic events and sensors. We do this by using the interval velocities used to migrate 3D-reflection seismic data that was previously acquired by a mining company to image the gold-bearing reef and any fault structures close to the mining horizon. Less attention was given to the velocities below the mining horizon, as accurate imaging of the geological structure was not as important and very little drilling information was available. We used the known depths of prominent reflectors above the mining horizon to derive the interval velocities needed to convert two-way-travel-time to depth. We constrain the velocity below the mining horizon by comparing the DSeis drilling results with the 3D seismic cube. The geometric data is crucial for the kinematic modeling that Ogasawara et al. (S018 in this AGU) advocates. The efforts will result in a better understanding of the main rupture and aftershocks.

  20. Visualizing and quantifying movement from pre-recorded videos: The spectral time-lapse (STL algorithm [v1; ref status: indexed, http://f1000r.es/2qo

    Directory of Open Access Journals (Sweden)

    Christopher R Madan

    2014-01-01

    Full Text Available When studying animal behaviour within an open environment, movement-related data are often important for behavioural analyses. Therefore, simple and efficient techniques are needed to present and analyze the data of such movements. However, it is challenging to present both spatial and temporal information of movements within a two-dimensional image representation. To address this challenge, we developed the spectral time-lapse (STL algorithm that re-codes an animal’s position at every time point with a time-specific color, and overlays it with a reference frame of the video, to produce a summary image. We additionally incorporated automated motion tracking, such that the animal’s position can be extracted and summary statistics such as path length and duration can be calculated, as well as instantaneous velocity and acceleration. Here we describe the STL algorithm and offer a freely available MATLAB toolbox that implements the algorithm and allows for a large degree of end-user control and flexibility.

  1. Seismic velocity model of the crust and upper mantle along profile PANCAKE across the Carpathians between the Pannonian Basin and the East European Craton

    DEFF Research Database (Denmark)

    Starostenko, V.; Janik, T.; Kolomiyets, K.

    2013-01-01

    the Transcarpathian Depression and the Carpathian Foredeep; and the south-western part of the EEC, including the Trans European Suture Zone (TESZ). Seismic data support a robust model of the Vp velocity structure of the crust. In the PB, the 22-23km thick crust consists of a 2-5km thick sedimentary layer (Vp=2......Results are presented of a seismic wide-angle reflection/refraction survey along a profile between the Pannonian Basin (PB) and the East European Craton (EEC) called PANCAKE. The P- and S-wave velocity model derived can be divided into three sectors: the PB; the Carpathians, including.......4-3.7km/s), 17-20km thick upper crystalline crust (5.9-6.3km/s) and an up to 3km thick lower crustal layer (Vp=6.4km/s). In the central part of the Carpathians, a 10-24km thick uppermost part of the crust with Vp≤6.0km/s may correspond to sedimentary rocks of different ages; several high velocity bodies...

  2. Simultaneous inversion of seismic velocity and moment tensor using elastic-waveform inversion of microseismic data: Application to the Aneth CO2-EOR field

    Science.gov (United States)

    Chen, Y.; Huang, L.

    2017-12-01

    Moment tensors are key parameters for characterizing CO2-injection-induced microseismic events. Elastic-waveform inversion has the potential to providing accurate results of moment tensors. Microseismic waveforms contains information of source moment tensors and the wave propagation velocity along the wavepaths. We develop an elastic-waveform inversion method to jointly invert the seismic velocity model and moment tensor. We first use our adaptive moment-tensor joint inversion method to estimate moment tensors of microseismic events. Our adaptive moment-tensor inversion method jointly inverts multiple microseismic events with similar waveforms within a cluster to reduce inversion uncertainty for microseismic data recorded using a single borehole geophone array. We use this inversion result as the initial model for our elastic-waveform inversion to minimize the cross-correlated-based data misfit between observed data and synthetic data. We verify our method using synthetic microseismic data and obtain improved results of both moment tensors and seismic velocity model. We apply our new inversion method to microseismic data acquired at a CO2-enhanced oil recovery field in Aneth, Utah, using a single borehole geophone array. The results demonstrate that our new inversion method significantly reduces the data misfit compared to the conventional ray-theory-based moment-tensor inversion.

  3. Final Report: Improved Site Characterization And Storage Prediction Through Stochastic Inversion Of Time-Lapse Geophysical And Geochemical Data

    Energy Technology Data Exchange (ETDEWEB)

    Ramirez, A; Mcnab, W; Hao, Y; White, D; Johnson, J

    2011-04-14

    During the last months of this project, our project activities have concentrated on four areas: (1) performing a stochastic inversion of pattern 16 seismic data to deduce reservoir bulk/shear moduli and density; the need for this inversion was not anticipated in the original scope of work, (2) performing a stochastic inversion of pattern 16 seismic data to deduce reservoir porosity and permeability, (3) complete the software needed to perform geochemical inversions and (4) use the software to perform stochastic inversion of aqueous chemistry data to deduce mineral volume fractions. This report builds on work described in progress reports previously submitted (Ramirez et al., 2009, 2010, 2011 - reports fulfilled the requirements of deliverables D1-D4) and fulfills deliverable D5: Field-based single-pattern simulations work product. The main challenge with our stochastic inversion approach is its large computational expense, even for single reservoir patterns. We dedicated a significant level of effort to improve computational efficiency but inversions involving multiple patterns were still intractable by project's end. As a result, we were unable to fulfill Deliverable D6: Field-based multi-pattern simulations work product.

  4. Time-lapse 3-D measurements of a glucose biosensor in multicellular spheroids by light sheet fluorescence microscopy in commercial 96-well plates.

    Science.gov (United States)

    Maioli, Vincent; Chennell, George; Sparks, Hugh; Lana, Tobia; Kumar, Sunil; Carling, David; Sardini, Alessandro; Dunsby, Chris

    2016-11-25

    Light sheet fluorescence microscopy has previously been demonstrated on a commercially available inverted fluorescence microscope frame using the method of oblique plane microscopy (OPM). In this paper, OPM is adapted to allow time-lapse 3-D imaging of 3-D biological cultures in commercially available glass-bottomed 96-well plates using a stage-scanning OPM approach (ssOPM). Time-lapse 3-D imaging of multicellular spheroids expressing a glucose Förster resonance energy transfer (FRET) biosensor is demonstrated in 16 fields of view with image acquisition at 10 minute intervals. As a proof-of-principle, the ssOPM system is also used to acquire a dose response curve with the concentration of glucose in the culture medium being varied across 42 wells of a 96-well plate with the whole acquisition taking 9 min. The 3-D image data enable the FRET ratio to be measured as a function of distance from the surface of the spheroid. Overall, the results demonstrate the capability of the OPM system to measure spatio-temporal changes in FRET ratio in 3-D in multicellular spheroids over time in a multi-well plate format.

  5. Assessment of human embryo development using morphological criteria in an era of time-lapse, algorithms and 'OMICS': is looking good still important?

    Science.gov (United States)

    Gardner, David K; Balaban, Basak

    2016-10-01

    With the worldwide move towards single embryo transfer there has been a renewed focus on the requirement for reliable means of assessing embryo viability. In an era of 'OMICS' technologies, and algorithms created through the use of time-lapse microscopy, the actual appearance of the human embryo as it progresses through each successive developmental stage to the blastocyst appears to have been somewhat neglected in recent years. Here we review the key features of the human preimplantation embryo and consider the relationship between morphological characteristics and developmental potential. Further, the impact of the culture environment on morphological traits, how key morphological qualities reflect aspects of embryo physiology, and how computer-assisted analysis of embryo morphology may facilitate a more quantitative approach to selection are discussed. The clinical introduction of time-lapse systems has reopened our eyes and given us a new vantage point from which to view the beauty of the initial stages of human life. Rather than a future in which the morphology of the embryo is deemed irrelevant, we propose that key features, such as multinucleation, cell size and blastocyst differentiation should be included in future iterations of selection/deselection algorithms. © The Author 2016. Published by Oxford University Press on behalf of the European Society of Human Reproduction and Embryology. All rights reserved.For Permissions, please email: journals.permissions@oup.com.

  6. In-vivo third-harmonic generation microscopy at 1550nm three-dimensional long-term time-lapse studies in living C. elegans embryos

    Science.gov (United States)

    Aviles-Espinosa, Rodrigo; Santos, Susana I. C. O.; Brodschelm, Andreas; Kaenders, Wilhelm G.; Alonso-Ortega, Cesar; Artigas, David; Loza-Alvarez, Pablo

    2011-03-01

    In-vivo microscopic long term time-lapse studies require controlled imaging conditions to preserve sample viability. Therefore it is crucial to meet specific exposure conditions as these may limit the applicability of established techniques. In this work we demonstrate the use of third harmonic generation (THG) microscopy for long term time-lapse three-dimensional studies (4D) in living Caenorhabditis elegans embryos employing a 1550 nm femtosecond fiber laser. We take advantage of the fact that THG only requires the existence of interfaces to generate signal or a change in the refractive index or in the χ3 nonlinear coefficient, therefore no markers are required. In addition, by using this wavelength the emitted THG signal is generated at visible wavelengths (516 nm) enabling the use of standard collection optics and detectors operating near their maximum efficiency. This enables the reduction of the incident light intensity at the sample plane allowing to image the sample for several hours. THG signal is obtained through all embryo development stages, providing different tissue/structure information. By means of control samples, we demonstrate that the expected water absorption at this wavelength does not severely compromise sample viability. Certainly, this technique reduces the complexity of sample preparation (i.e. genetic modification) required by established linear and nonlinear fluorescence based techniques. We demonstrate the non-invasiveness, reduced specimen interference, and strong potential of this particular wavelength to be used to perform long-term 4D recordings.

  7. Anomalous density and elastic properties of basalt at high pressure: Reevaluating of the effect of melt fraction on seismic velocity in the Earth's crust and upper mantle

    Science.gov (United States)

    Clark, Alisha N.; Lesher, Charles E.; Jacobsen, Steven D.; Wang, Yanbin

    2016-06-01

    Independent measurements of the volumetric and elastic properties of Columbia River basalt glass were made up to 5.5 GPa by high-pressure X-ray microtomography and GHz-ultrasonic interferometry, respectively. The Columbia River basalt displays P and S wave velocity minima at 4.5 and 5 GPa, respectively, violating Birch's law. These data constrain the pressure dependence of the density and elastic moduli at high pressure, which cannot be modeled through usual equations of state nor determined by stepwise integrating the bulk sound velocity as is common practice. We propose a systematic variation in compression behavior of silicate glasses that is dependent on the degree of polymerization and arises from the flexibility of the aluminosilicate network. This behavior likely persists into the liquid state for basaltic melts resulting in weak pressure dependence for P wave velocities perhaps to depths of the transition zone. Modeling the effect of partial melt on P wave velocity reductions suggests that melt fraction determined by seismic velocity variations may be significantly overestimated in the crust and upper mantle.

  8. 3-D Upper-Mantle Shear Velocity Model Beneath the Contiguous United States Based on Broadband Surface Wave from Ambient Seismic Noise

    Science.gov (United States)

    Xie, Jun; Chu, Risheng; Yang, Yingjie

    2018-05-01

    Ambient noise seismic tomography has been widely used to study crustal and upper-mantle shear velocity structures. Most studies, however, concentrate on short period (structure on a continental scale. We use broadband Rayleigh wave phase velocities to obtain a 3-D V S structures beneath the contiguous United States at period band of 10-150 s. During the inversion, 1-D shear wave velocity profile is parameterized using B-spline at each grid point and is inverted with nonlinear Markov Chain Monte Carlo method. Then, a 3-D shear velocity model is constructed by assembling all the 1-D shear velocity profiles. Our model is overall consistent with existing models which are based on multiple datasets or data from earthquakes. Our model along with the other post-USArray models reveal lithosphere structures in the upper mantle, which are consistent with the geological tectonic background (e.g., the craton root and regional upwelling provinces). The model has comparable resolution on lithosphere structures compared with many published results and can be used for future detailed regional or continental studies and analysis.

  9. Seismic velocity anisotropy of phyllosilicate-rich rocks: characteristics inferred from experimental and crack-model studies of biotite-rich schist

    Science.gov (United States)

    Nishizawa, O.; Kanagawa, K.

    2010-07-01

    Seismic velocity anisotropy of biotite schist (30 per cent-mode biotite) was measured under confining pressures up to 150 MPa. The rock shows weak orthotropy which was altered from transverse isotropy (TI) generated by biotite-preferred orientation. The orthotropy was caused by microfolding in the rock. The velocity increase under confining pressure indicates that most crack planes are aligned parallel to the cleavage planes (silicate sheet) of the oriented biotite minerals. The anisotropy of the rock is basically TI due to both the aligned biotite minerals and cracks, which have a common symmetry axis. We found that other sheet silicate-rich rocks have a similar anisotropy with the biotite schist, in which the TI-type anisotropy is characterized by the slow P- and S-wave velocities along the symmetry axis. This is caused by the preferred orientation of sheet silicate minerals and the extremely slow P- and S-wave velocities along the axis perpendicular to the silicate sheet compared to the directions along the silicate sheet. When rock contains a large percentage of highly oriented sheet silicates, the fast and slow shear waves exchange their polarities at some off-symmetry axis directions, indicating that the qS-wave (quasi-S wave) velocity exceeds the SH-wave velocity. The phase velocity distribution of qS wave shows an asymmetry with respect to the angle from the symmetry axis, which is characterized by a bulge in this distribution located near the symmetric axis. This is inherent to most sheet silicate minerals. When crack density of aligned cracks increases, the P-wave velocity along the symmetry axis decreases considerably. The qS-wave phase velocity in the off-axis directions also decreases, in accordance with the decrease of the P velocity along the symmetry axis. The asymmetry of the qS-wave phase velocity distribution increases as the P-wave velocity decreases along the symmetry axis. This relationship can be well understood by means of Berryman

  10. Time-Lapse Analysis of Methane Quantity in the Mary Lee Group of Coal Seams Using Filter-Based Multiple-Point Geostatistical Simulation.

    Science.gov (United States)

    Karacan, C Özgen; Olea, Ricardo A

    2013-08-01

    Coal seam degasification and its success are important for controlling methane, and thus for the health and safety of coal miners. During the course of degasification, properties of coal seams change. Thus, the changes in coal reservoir conditions and in-place gas content as well as methane emission potential into mines should be evaluated by examining time-dependent changes and the presence of major heterogeneities and geological discontinuities in the field. In this work, time-lapsed reservoir and fluid storage properties of the New Castle coal seam, Mary Lee/Blue Creek seam, and Jagger seam of Black Warrior Basin, Alabama, were determined from gas and water production history matching and production forecasting of vertical degasification wellbores. These properties were combined with isotherm and other important data to compute gas-in-place (GIP) and its change with time at borehole locations. Time-lapsed training images (TIs) of GIP and GIP difference corresponding to each coal and date were generated by using these point-wise data and Voronoi decomposition on the TI grid, which included faults as discontinuities for expansion of Voronoi regions. Filter-based multiple-point geostatistical simulations, which were preferred in this study due to anisotropies and discontinuities in the area, were used to predict time-lapsed GIP distributions within the study area. Performed simulations were used for mapping spatial time-lapsed methane quantities as well as their uncertainties within the study area. The systematic approach presented in this paper is the first time in literature that history matching, TIs of GIPs and filter simulations are used for degasification performance evaluation and for assessing GIP for mining safety. Results from this study showed that using production history matching of coalbed methane wells to determine time-lapsed reservoir data could be used to compute spatial GIP and representative GIP TIs generated through Voronoi decomposition

  11. Geophysical imaging of near-surface structure using electromagnetic and seismic waves

    Science.gov (United States)

    Chen, Yongping

    of tomograms to interpret plume morphology. In my second study I developed a passive-seismic method to image shear-wave velocity, which is an important geotechnical property commonly correlated with soil type or lithology. I inverted shear-wave velocity profiles from the phase velocity dispersion of Rayleigh waves based on passive seismic observations (microtremors). I used several sets of microtremor data which were collected at different sites. I obtained the phase velocity dispersion curve by the Extended Spatial Autocorrelation (ESPAC) method. I used simulated annealing method is used to invert the subsurface shear-wave velocity profile from the fundamental phase velocity dispersion curve. The field-experimental and synthetic results indicated that the microtremor approach can provide valuable information for quantitative geotechnical and hydrologic characterization. In my third study I developed a method to image vadose-zone dynamics using GPR. Flow in the unsaturated zone is important for predicting groundwater recharge, contaminant migration, and chemical/microbiological processes. However, it is difficult to characterize or monitor with conventional hydrologic measurements, which provide information at sparse locations. The purpose of this study was to image changes in moisture content, as well as aquifer structure based on the relation between dielectric constant and water content. The objective was to calibrate a flow model to field-experimental, time-lapse GPR data collected during an infiltration experiment. To this end, (1) I constructed a VS2DT model based on aquifer structure interpreted from static GPR reflection profiles; (2) I manually calibrated the model to reproduce observed changes in GPR data during infiltration; and (3) I used a time-domain electromagnetic finite-difference model to simulate experimental observations for comparison. The results of this work indicate that time-lapse GPR can monitor changes in water content on the order of a few

  12. A Centerless Circular Array Method: Extracting Maximal Information on Phase Velocities of Rayleigh Waves From Microtremor Records From a Simple Seismic Array

    Science.gov (United States)

    Cho, I.; Tada, T.; Shinozaki, Y.

    2005-12-01

    We have developed a Centerless Circular Array (CCA) method of microtremor exploration, an algorithm that enables to estimate phase velocities of Rayleigh waves by analyzing vertical-component records of microtremors that are obtained with an array of three or five seismic sensors placed around a circumference. Our CCA method shows a remarkably high performance in long-wavelength ranges because, unlike the frequency-wavenumber spectral method, our method does not resolve individual plane-wave components in the process of identifying phase velocities. Theoretical considerations predict that the resolving power of our CCA method in long-wavelength ranges depends upon the SN ratio, or the ratio of power of the propagating components to that of the non-propagating components (incoherent noise) contained in the records from the seismic array. The applicability of our CCA method to small-sized arrays on the order of several meters in radius has already been confirmed in our earlier work (Cho et al., 2004). We have deployed circular seismic arrays of different sizes at test sites in Japan where the underground structure is well documented through geophysical exploration, and have applied our CCA method to microtremor records to estimate phase velocities of Rayleigh waves. The estimates were then checked against "model" phase velocities that are derived from theoretical calculations. For arrays of 5, 25, 300 and 600 meters in radii, the estimated and model phase velocities demonstrated fine agreement within a broad wavelength range extending from a little larger than 3r (r: the array radius) up to at least 40r, 14r, 42r and 9r, respectively. This demonstrates the applicability of our CCA method to arrays on the order of several to several hundreds of meters in radii, and also illustrates, in a typical way, the markedly high performance of our CCA method in long-wavelength ranges. We have also invented a mathematical model that enables to evaluate the SN ratio in a given

  13. 2.5D seismic velocity modelling in the south-eastern Romanian Carpathians Orogen and its foreland.

    NARCIS (Netherlands)

    Bocin, A.; Stephenson, R.A.; Tryggvason, A.; Panea, I; Mocanu, V.I.; Hauser, F

    2005-01-01

    The DACIA-PLAN (Danube and Carpathian Integrated Action on Processes in the Lithosphere and Neotectonics) deep seismic reflection survey was performed in August-September 2001, with the objective of obtaining new information on the deep structure of the external Carpathians nappe system and the

  14. Seismic site-response characterization of high-velocity sites using advanced geophysical techniques: application to the NAGRA-Net

    Czech Academy of Sciences Publication Activity Database

    Poggi, V.; Burjánek, Jan; Michel, C.; Fäh, D.

    2017-01-01

    Roč. 210, č. 2 (2017), s. 645-659 ISSN 0956-540X Institutional support: RVO:67985530 Keywords : joint inversion * earthquake ground motions * seismic noise * site effects Subject RIV: DC - Siesmology, Volcanology, Earth Structure OBOR OECD: Volcanology Impact factor: 2.414, year: 2016

  15. The ascent of magma as determined by seismic tomography. The visualization of velocity structure and magma distribution from upper mantle to upper crust in Hakone volcano, northern Izu peninsula

    International Nuclear Information System (INIS)

    Abe, Shintaro; Aoyagi, Yasuhira; Toshida, Kiyoshi; Oda, Yoshiya

    2003-01-01

    Three-dimensional seismic reflection and refraction survey was carried out in Hakone volcanic area, northern part of Izu peninsula. The region is one of the most famous hot spring areas in Japan. Hakone volcano morphologically resembles one big caldera. However, the depression of the volcano consists of several small calderas which has been formed by multiple eruptions. Although sprouts of fumarolic gas and steam are identified in a few areas of the volcano, there is no historical record of volcanic eruption. Main purpose of our study is to determine the 3-dimensional deep velocity structure around the volcano using the seismic tomography processing. We deployed 44 sets of temporal offline seismic stations and a line of multi-channels seismic reflection survey cable. The seismic waves generated by some natural earthquakes and 14 dynamite explosions were observed, and their data were processed for tomography. The observation coverage was 20 km in diameter. Our result demonstrates the usefulness of high dense seismic observation in identifying and locating low velocity zones beneath the particular area. According to our tomography, low velocity zone was identified only in surface layer of the old caldera part of the volcano. We could not identify any remarkable reflector in deeper crust, as the result of wide-angle reflection survey using explosive shots. Moreover, we could not identify any other low velocity zone as far as 32 km depth by incorporating the results of other study. In other words, we think that magma is no longer supplied to Hakone volcanic area. (author)

  16. The Effect of Boiling on Seismic Properties of Water-Saturated Fractured Rock

    Science.gov (United States)

    Grab, Melchior; Quintal, Beatriz; Caspari, Eva; Deuber, Claudia; Maurer, Hansruedi; Greenhalgh, Stewart

    2017-11-01

    Seismic campaigns for exploring geothermal systems aim at detecting permeable formations in the subsurface and evaluating the energy state of the pore fluids. High-enthalpy geothermal resources are known to contain fluids ranging from liquid water up to liquid-vapor mixtures in regions where boiling occurs and, ultimately, to vapor-dominated fluids, for instance, if hot parts of the reservoir get depressurized during production. In this study, we implement the properties of single- and two-phase fluids into a numerical poroelastic model to compute frequency-dependent seismic velocities and attenuation factors of a fractured rock as a function of fluid state. Fluid properties are computed while considering that thermodynamic interaction between the fluid phases takes place. This leads to frequency-dependent fluid properties and fluid internal attenuation. As shown in a first example, if the fluid contains very small amounts of vapor, fluid internal attenuation is of similar magnitude as attenuation in fractured rock due to other mechanisms. In a second example, seismic properties of a fractured geothermal reservoir with spatially varying fluid properties are calculated. Using the resulting seismic properties as an input model, the seismic response of the reservoir is then computed while the hydrothermal structure is assumed to vary over time. The resulting seismograms demonstrate that anomalies in the seismic response due to fluid state variability are small compared to variations caused by geological background heterogeneity. However, the hydrothermal structure in the reservoir can be delineated from amplitude anomalies when the variations due to geology can be ruled out such as in time-lapse experiments.

  17. Distance parameterization for efficient seismic history matching with the ensemble Kalman Filter

    NARCIS (Netherlands)

    Leeuwenburgh, O.; Arts, R.

    2012-01-01

    The Ensemble Kalman Filter (EnKF), in combination with travel-time parameterization, provides a robust and flexible method for quantitative multi-model history matching to time-lapse seismic data. A disadvantage of the parameterization in terms of travel-times is that it requires simulation of

  18. Clustering of velocities in a GPS network spanning the Sierra Nevada Block, the northern Walker Lane Belt, and the Central Nevada Seismic Belt, California-Nevada

    Science.gov (United States)

    Savage, James C.; Simpson, Robert W.

    2013-01-01

    The deformation across the Sierra Nevada Block, the Walker Lane Belt, and the Central Nevada Seismic Belt (CNSB) between 38.5°N and 40.5°N has been analyzed by clustering GPS velocities to identify coherent blocks. Cluster analysis determines the number of clusters required and assigns the GPS stations to the proper clusters. The clusters are shown on a fault map by symbols located at the positions of the GPS stations, each symbol representing the cluster to which the velocity of that GPS station belongs. Fault systems that separate the clusters are readily identified on such a map. Four significant clusters are identified. Those clusters are strips separated by (from west to east) the Mohawk Valley-Genoa fault system, the Pyramid Lake-Wassuk fault system, and the Central Nevada Seismic Belt. The strain rates within the westernmost three clusters approximate simple right-lateral shear (~13 nstrain/a) across vertical planes roughly parallel to the cluster boundaries. Clustering does not recognize the longitudinal segmentation of the Walker Lane Belt into domains dominated by either northwesterly trending, right-lateral faults or northeasterly trending, left-lateral faults.

  19. Seismic velocity site characterization of 10 Arizona strong-motion recording stations by spectral analysis of surface wave dispersion

    Science.gov (United States)

    Kayen, Robert E.; Carkin, Brad A.; Corbett, Skye C.

    2017-10-19

    Vertical one-dimensional shear wave velocity (VS) profiles are presented for strong-motion sites in Arizona for a suite of stations surrounding the Palo Verde Nuclear Generating Station. The purpose of the study is to determine the detailed site velocity profile, the average velocity in the upper 30 meters of the profile (VS30), the average velocity for the entire profile (VSZ), and the National Earthquake Hazards Reduction Program (NEHRP) site classification. The VS profiles are estimated using a non-invasive continuous-sine-wave method for gathering the dispersion characteristics of surface waves. Shear wave velocity profiles were inverted from the averaged dispersion curves using three independent methods for comparison, and the root-mean-square combined coefficient of variation (COV) of the dispersion and inversion calculations are estimated for each site.

  20. Time-lapse cinematography study of the germinal vesicle behaviour in mouse primary oocytes treated with activators of protein kinases A and C.

    Science.gov (United States)

    Alexandre, H; Mulnard, J

    1988-12-01

    A passive erratic movement of the germinal vesicle (GV), already visible in small incompetent oocytes, is followed by an active scalloping of the nuclear membrane soon before GV breakdown (GVBD) in cultured competent oocytes. Maturation can be inhibited by activators of protein kinase A (PK-A) and protein kinase C (PK-C). Our time-lapse cinematography analysis allowed us to describe an unexpected behaviour of the GV when PK-C, but not PK-A, is activated: GV undergoes a displacement toward the cortex according to the same biological clock which triggers the programmed translocation of the spindle in control oocytes. It is concluded that, when oocytes become committed to undergo maturation, the cytoplasm acquires a PK-A-controlled "centrifugal displacement property" which is not restricted to the spindle.

  1. MONITORING EROSION OF STONE SURFACES USING TIME-LAPSE AND PTM PHOTOGRAPHY: FIELD STUDY OF A 14TH CENTURY MONASTERY IN YORKSHIRE

    Science.gov (United States)

    Doehne, E.; Pinchin, S.

    2009-12-01

    Evaluating stone weathering rates and their relationship to environmental fluctuations is an important challenge in understanding the critical zone and also in efforts to prevent the loss of important cultural heritage in stone, such as monuments, sculpture and archaeological sites. Repeat photography has been widely used to evaluate geological processes such as the retreat of glaciers and the weathering of stone surfaces. However, a fundamental difficulty is that the images are often shot under differing lighting conditions, making the interpretation of stone surface loss particularly challenging. Two developments in photographic documentation show promise for improving the situation. One is the use of digital time-lapse methods to provide more frequent images to correlate stone surface loss with ongoing environmental changes. The other is a relatively new method known as polynomial transform mapping (PTM), which integrates multiple photographs taken at different angles to document more comprehensively the texture of stone surfaces. Using Java-based software, the viewer can control the precise angle of the light source in an interpolated, high-quality image. PTM can produce raking light images from any angle, as well as images with ‘normal’ illumination. We present here results based on several years of macro-photography, time-lapse imaging, and PTM imaging of rapidly eroding stone surfaces at the site of Howden Minster in Yorkshire, UK, which suffers from salt weathering. The images show that surface loss is episodic rather than continuous and in some cases is related to unusual environmental conditions, such as high winds and condensation events. Damage was also found to be synchronous, with surface change (flaking, granular disintegration, and loss of flakes) occurring at the same time in different stone blocks. Crystallization pressure from phase transitions in magnesium sulfate salts appears to be the main cause of the loss of stone surfaces.

  2. Three-dimensional quantification of orthodontic root resorption with time-lapsed imaging of micro-computed tomography in a rodent model.

    Science.gov (United States)

    Yang, Chongshi; Zhang, Yuanyuan; Zhang, Yan; Fan, Yubo; Deng, Feng

    2015-01-01

    Despite various X-ray approaches have been widely used to monitor root resorption after orthodontic treatment, a non-invasive and accurate method is highly desirable for long-term follow up. The aim of this study was to build a non-invasive method to quantify longitudinal orthodontic root resorption with time-lapsed images of micro-computed tomography (micro-CT) in a rodent model. Twenty male Sprague Dawley (SD) rats (aged 6-8 weeks, weighing 180-220 g) were used in this study. A 25 g orthodontic force generated by nickel-titanium coil spring was applied to the right maxillary first molar for each rat, while contralateral first molar was severed as a control. Micro-CT scan was performed at day 0 (before orthodontic load) and days 3, 7, 14, and 28 after orthodontic load. Resorption of mesial root of maxillary first molars at bilateral sides was calculated from micro-CT images with registration algorithm via reconstruction, superimposition and partition operations. Obvious resorption of mesial root of maxillary first molar can be detected at day 14 and day 28 at orthodontic side. Most of the resorption occurred in the apical region at distal side and cervical region at mesiolingual side. Desirable development of molar root of rats was identified from day 0 to day 28 at control side. The development of root concentrated on apical region. This non-invasive 3D quantification method with registration algorithm can be used in longitudinal study of root resorption. Obvious root resorption in rat molar can be observed three-dimensionally at day 14 and day 28 after orthodontic load. This indicates that registration algorithm combined with time-lapsed images provides clinic potential application in detection and quantification of root contour.

  3. Noninferiority, randomized, controlled trial comparing embryo development using media developed for sequential or undisturbed culture in a time-lapse setup.

    Science.gov (United States)

    Hardarson, Thorir; Bungum, Mona; Conaghan, Joe; Meintjes, Marius; Chantilis, Samuel J; Molnar, Laszlo; Gunnarsson, Kristina; Wikland, Matts

    2015-12-01

    To study whether a culture medium that allows undisturbed culture supports human embryo development to the blastocyst stage equivalently to a well-established sequential media. Randomized, double-blinded sibling trial. Independent in vitro fertilization (IVF) clinics. One hundred twenty-eight patients, with 1,356 zygotes randomized into two study arms. Embryos randomly allocated into two study arms to compare embryo development on a time-lapse system using a single-step medium or sequential media. Percentage of good-quality blastocysts on day 5. Percentage of day 5 good-quality blastocysts was 21.1% (standard deviation [SD] ± 21.6%) and 22.2% (SD ± 22.1%) in the single-step time-lapse medium (G-TL) and the sequential media (G-1/G-2) groups, respectively. The mean difference (-1.2; 95% CI, -6.0; 3.6) between the two media systems for the primary end point was less than the noninferiority margin of -8%. There was a statistically significantly lower number of good-quality embryos on day 3 in the G-TL group [50.7% (SD ± 30.6%) vs. 60.8% (SD ± 30.7%)]. Four out of the 11 measured morphokinetic parameters were statistically significantly different for the two media used. The mean levels of ammonium concentration in the media at the end of the culture period was statistically significantly lower in the G-TL group as compared with the G-2 group. We have shown that a single-step culture medium supports blastocyst development equivalently to established sequential media. The ammonium concentrations were lower in the single-step media, and the measured morphokinetic parameters were modified somewhat. NCT01939626. Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

  4. Automated profiling of individual cell-cell interactions from high-throughput time-lapse imaging microscopy in nanowell grids (TIMING).

    Science.gov (United States)

    Merouane, Amine; Rey-Villamizar, Nicolas; Lu, Yanbin; Liadi, Ivan; Romain, Gabrielle; Lu, Jennifer; Singh, Harjeet; Cooper, Laurence J N; Varadarajan, Navin; Roysam, Badrinath

    2015-10-01

    There is a need for effective automated methods for profiling dynamic cell-cell interactions with single-cell resolution from high-throughput time-lapse imaging data, especially, the interactions between immune effector cells and tumor cells in adoptive immunotherapy. Fluorescently labeled human T cells, natural killer cells (NK), and various target cells (NALM6, K562, EL4) were co-incubated on polydimethylsiloxane arrays of sub-nanoliter wells (nanowells), and imaged using multi-channel time-lapse microscopy. The proposed cell segmentation and tracking algorithms account for cell variability and exploit the nanowell confinement property to increase the yield of correctly analyzed nanowells from 45% (existing algorithms) to 98% for wells containing one effector and a single target, enabling automated quantification of cell locations, morphologies, movements, interactions, and deaths without the need for manual proofreading. Automated analysis of recordings from 12 different experiments demonstrated automated nanowell delineation accuracy >99%, automated cell segmentation accuracy >95%, and automated cell tracking accuracy of 90%, with default parameters, despite variations in illumination, staining, imaging noise, cell morphology, and cell clustering. An example analysis revealed that NK cells efficiently discriminate between live and dead targets by altering the duration of conjugation. The data also demonstrated that cytotoxic cells display higher motility than non-killers, both before and during contact. broysam@central.uh.edu or nvaradar@central.uh.edu Supplementary data are available at Bioinformatics online. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  5. Downhole seismic monitoring with Virtual Sources

    Science.gov (United States)

    Bakulin, A.; Calvert, R.

    2005-12-01

    sources and receivers (e.g. in-situ 4D seismic), but for now VSM may be the most economical alternative. By performing data-driven redatuming with measured Green's functions, these data can be recast into complete downhole dataset with buried Virtual Sources located at each downhole geophone. This step can be effectively thought of as a time reversal and it's remarkable feature is that velocity model between sources and receivers is not required to perform it. We will show various applications of the VSM method to several synthetic and real time-lapse datasets to illustrate the following advantages: 1) ability of VSM to eliminate overburden distortions without knowing velocity model between surface sources and downhole receivers, 2) greater quality of Virtual Sources in strongly scattering environment, 3) beneficial downward only radiation pattern on the Virtual Sources, 4) ability to correct non-repeatability caused by slight changes in acquisition geometry and temporal changes in the near surface, 5) ability to create P-wave Virtual Sources without shear radiation and S-sources without P-waves. Versatility of VSM to handle 1D, 2D and 3D situations and its ability to handle overburdens of any complexity makes it an indispensable tool for the active geophysical monitoring in a challenging geological environments. Although examples presented all come from an oilfield, it is straightforward to envision analogous applications in many other fields ranging from global geophysics to monitoring man-made structures.

  6. Two-photon time-lapse microscopy of BODIPY-cholesterol reveals anomalous sterol diffusion in chinese hamster ovary cells

    Directory of Open Access Journals (Sweden)

    Lund Frederik W

    2012-10-01

    Full Text Available Abstract Background Cholesterol is an important membrane component, but our knowledge about its transport in cells is sparse. Previous imaging studies using dehydroergosterol (DHE, an intrinsically fluorescent sterol from yeast, have established that vesicular and non-vesicular transport modes contribute to sterol trafficking from the plasma membrane. Significant photobleaching, however, limits the possibilities for in-depth analysis of sterol dynamics using DHE. Co-trafficking studies with DHE and the recently introduced fluorescent cholesterol analog BODIPY-cholesterol (BChol suggested that the latter probe has utility for prolonged live-cell imaging of sterol transport. Results We found that BChol is very photostable under two-photon (2P-excitation allowing the acquisition of several hundred frames without significant photobleaching. Therefore, long-term tracking and diffusion measurements are possible. Two-photon temporal image correlation spectroscopy (2P-TICS provided evidence for spatially heterogeneous diffusion constants of BChol varying over two orders of magnitude from the cell interior towards the plasma membrane, where D ~ 1.3 μm2/s. Number and brightness (N&B analysis together with stochastic simulations suggest that transient partitioning of BChol into convoluted membranes slows local sterol diffusion. We observed sterol endocytosis as well as fusion and fission of sterol-containing endocytic vesicles. The mobility of endocytic vesicles, as studied by particle tracking, is well described by a model for anomalous subdiffusion on short time scales with an anomalous exponent α ~ 0.63 and an anomalous diffusion constant of Dα = 1.95 x 10-3 μm2/sα. On a longer time scale (t > ~5 s, a transition to superdiffusion consistent with slow directed transport with an average velocity of v ~ 6 x 10-3 μm/s was observed. We present an analytical model that bridges the two regimes and fit this model to vesicle

  7. Novel migrating mouse neural crest cell assay system utilizing P0-Cre/EGFP fluorescent time-lapse imaging

    Directory of Open Access Journals (Sweden)

    Kawakami Minoru

    2011-11-01

    Full Text Available Abstract Background Neural crest cells (NCCs are embryonic, multipotent stem cells. Their long-range and precision-guided migration is one of their most striking characteristics. We previously reported that P0-Cre/CAG-CAT-lacZ double-transgenic mice showed significant lacZ expression in tissues derived from NCCs. Results In this study, by embedding a P0-Cre/CAG-CAT-EGFP embryo at E9.5 in collagen gel inside a culture glass slide, we were able to keep the embryo developing ex vivo for more than 24 hours; this development was with enough NCC fluorescent signal intensity to enable single-cell resolution analysis, with the accompanying NCC migration potential intact and with the appropriate NCC response to the extracellular signal maintained. By implantation of beads with absorbed platelet-derived growth factor-AA (PDGF-AA, we demonstrated that PDGF-AA acts as an NCC-attractant in embryos. We also performed assays with NCCs isolated from P0-Cre/CAG-CAT-EGFP embryos on culture plates. The neuromediator 5-hydroxytryptamine (5-HT has been known to regulate NCC migration. We newly demonstrated that dopamine, in addition to 5-HT, stimulated NCC migration in vitro. Two NCC populations, with different axial levels of origins, showed unique distribution patterns regarding migration velocity and different dose-response patterns to both 5-HT and dopamine. Conclusions Although avian species predominated over the other species in the NCC study, our novel system should enable us to use mice to assay many different aspects of NCCs in embryos or on culture plates, such as migration, division, differentiation, and apoptosis.

  8. The determination of high-resolution spatio-temporal glacier motion fields from time-lapse sequences

    Science.gov (United States)

    Schwalbe, Ellen; Maas, Hans-Gerd

    2017-12-01

    This paper presents a comprehensive method for the determination of glacier surface motion vector fields at high spatial and temporal resolution. These vector fields can be derived from monocular terrestrial camera image sequences and are a valuable data source for glaciological analysis of the motion behaviour of glaciers. The measurement concepts for the acquisition of image sequences are presented, and an automated monoscopic image sequence processing chain is developed. Motion vector fields can be derived with high precision by applying automatic subpixel-accuracy image matching techniques on grey value patterns in the image sequences. Well-established matching techniques have been adapted to the special characteristics of the glacier data in order to achieve high reliability in automatic image sequence processing, including the handling of moving shadows as well as motion effects induced by small instabilities in the camera set-up. Suitable geo-referencing techniques were developed to transform image measurements into a reference coordinate system.The result of monoscopic image sequence analysis is a dense raster of glacier surface point trajectories for each image sequence. Each translation vector component in these trajectories can be determined with an accuracy of a few centimetres for points at a distance of several kilometres from the camera. Extensive practical validation experiments have shown that motion vector and trajectory fields derived from monocular image sequences can be used for the determination of high-resolution velocity fields of glaciers, including the analysis of tidal effects on glacier movement, the investigation of a glacier's motion behaviour during calving events, the determination of the position and migration of the grounding line and the detection of subglacial channels during glacier lake outburst floods.

  9. Seismic velocities within the sedimentary succession of the Canada Basin and southern Alpha-Mendeleev Ridge, Arctic Ocean: evidence for accelerated porosity reduction?

    Science.gov (United States)

    Shimeld, John; Li, Qingmou; Chian, Deping; Lebedeva-Ivanova, Nina; Jackson, Ruth; Mosher, David; Hutchinson, Deborah R.

    2016-01-01

    The Canada Basin and the southern Alpha-Mendeleev ridge complex underlie a significant proportion of the Arctic Ocean, but the geology of this undrilled and mostly ice-covered frontier is poorly known. New information is encoded in seismic wide-angle reflections and refractions recorded with expendable sonobuoys between 2007 and 2011. Velocity–depth samples within the sedimentary succession are extracted from published analyses for 142 of these records obtained at irregularly spaced stations across an area of 1.9E + 06 km2. The samples are modelled at regional, subregional and station-specific scales using an exponential function of inverse velocity versus depth with regionally representative parameters determined through numerical regression. With this approach, smooth, non-oscillatory velocity–depth profiles can be generated for any desired location in the study area, even where the measurement density is low. Practical application is demonstrated with a map of sedimentary thickness, derived from seismic reflection horizons interpreted in the time domain and depth converted using the velocity–depth profiles for each seismic trace. A thickness of 12–13 km is present beneath both the upper Mackenzie fan and the middle slope off of Alaska, but the sedimentary prism thins more gradually outboard of the latter region. Mapping of the observed-to-predicted velocities reveals coherent geospatial trends associated with five subregions: the Mackenzie fan; the continental slopes beyond the Mackenzie fan; the abyssal plain; the southwestern Canada Basin; and, the Alpha-Mendeleev magnetic domain. Comparison of the subregional velocity–depth models with published borehole data, and interpretation of the station-specific best-fitting model parameters, suggests that sandstone is not a predominant lithology in any of the five subregions. However, the bulk sand-to-shale ratio likely increases towards the Mackenzie fan, and the model for this subregion compares

  10. The effects of pressure, temperature, and pore water on velocities in Westerly granite. [for seismic wave propagation

    Science.gov (United States)

    Spencer, J. W., Jr.; Nur, A. M.

    1976-01-01

    A description is presented of an experimental assembly which has been developed to conduct concurrent measurements of compressional and shear wave velocities in rocks at high temperatures and confining pressures and with independent control of the pore pressure. The apparatus was used in studies of the joint effects of temperature, external confining pressure, and internal pore water on sonic velocities in Westerly granite. It was found that at a given temperature, confining pressure has a larger accelerating effect on compressional waves in dry rock, whereas at a given confining pressure, temperature has a larger retarding effect on shear waves.

  11. Comparative in situ X-ray Diffraction Study of San Carlos Olivine: Influence of Water on the 410 km Seismic Velocity Jump in Earth’s Mantle

    Energy Technology Data Exchange (ETDEWEB)

    J Chen; H Liu; J Girard

    2011-12-31

    A comparative study of the equation of states of hydrous (0.4 wt% H{sub 2}O) and anhydrous San Carlos olivine (<30 ppm H2O) was conducted using synchrotron X-rays up to 11 GPa in a diamond anvil cell (DAC) at ambient temperature. Both samples were loaded in the same high-pressure chamber of the DAC to eliminate the possible pressure difference in different experiments. The obtained compression data were fitted to the third-order Birch-Murnaghan equation of state, yielding a bulk modulus K{sub 0} = 123(3) GPa for hydrous olivine and K{sub 0} = 130(4) GPa for anhydrous olivine as K{sub 0}' is fixed at 4.6. Therefore, 0.4 wt% H{sub 2}2O in olivine results in a 5% reduction in bulk modulus. Previous studies reported bulk modulus reduction by water in olivine's high-pressure polymorph (wadsleyite), to which the transformation from olivine gives rise to the seismic discontinuity at 410 km depth. The new data results in a reduction in the magnitude of the discontinuity by 50% in v{sub P} and 30% in v{sub S} (for 1:5 water partitioning between olivine and wadsleyite) with respect to anhydrous mantle. Previous knowledge of the influence of water on this phase transition has been in opposition to a large amount of water [e.g., 200 ppm by Wood (1995)] existing at 410 km depth. Calculation of the seismic velocities based on newly available elasticity data of the hydrous phases indicates that the presence of water is favorable for the mineral composition model (pyrolite) and seismic observations in terms of the magnitude of the 410 km discontinuity.

  12. Seismic anisotropy and compositionally induced velocity anomalies in the lithosphere above mantle plumes: a petrological and microstructural study of mantle xenoliths from French Polynesia

    Science.gov (United States)

    Tommasi, Andréa; Godard, Marguerite; Coromina, Guilhem; Dautria, Jean-Marie; Barsczus, Hans

    2004-11-01

    In addition to thermal erosion, plume/lithosphere interaction may induce significant changes in the lithosphere chemical composition. To constrain the extent of this process in an oceanic environment and its consequences on the lithosphere seismic properties, we investigated the relationship between petrological processes and microstructure in mantle xenoliths from different hotspots tracks in South Pacific Superswell region: the Austral-Cook, Society, and Marquesas islands in French Polynesia. Olivine forsterite contents in the studied spinel peridotites vary continuously from Fo91 to Fo83. Dunites and wehrlites display the lowest forsterite contents. Their microstructure and high Ni contents preclude a cumulate origin, suggesting that these rocks result from melt/rock reactions involving olivine precipitation and pyroxene dissolution. In addition, lherzolites and wehrlites display evidence of late crystallization of clinopyroxene, which may result from a near-solidus melt-freezing reaction. These data suggest that the lithosphere above a mantle plume undergoes a complex sequence of magmatic processes that significantly change its composition. These compositional changes, particularly iron enrichment in olivine, result in lower P- and S-waves velocities. Relative to normal lithospheric mantle, compositionally induced seismic anomalies may attain -2.2% for S-waves and -1% for P-waves. Smaller negative anomalies for P-waves are due to a higher sensitivity to modal composition. Conversely, crystal-preferred orientations (CPO) and seismic anisotropy are little affected by these processes. Lherzolites and harzburgites, independent from composition, show high-temperature porphyroclastic microstructures and strong olivine CPO. Dunites and wehrlites display annealing microstructures to which is associated a progressive dispersion of the olivine CPO. Very weak, almost random olivine CPO is nevertheless rare, suggesting that CPO destruction is restricted to domains of

  13. 3-D crustal P-wave velocity tomography of the Italian region using local and regional seismicity data

    Directory of Open Access Journals (Sweden)

    F. M. Mele

    1995-06-01

    Full Text Available A tomographic experiment was performed in the Italian region using local and regional arrivaI times of p and S seismological phases selected from the Italian National Bulletin in the time interval 1984-1991. We deter- mined a 3-D crustal P-wave velocity model using a simultaneous inversion method that iteratively re1ocates the hypocenters and computes the unknown model parameters. A fast two-point ray tracing algorithm was adopted to compute the ray paths and travel times of P", S", P g' Sg phases with good accuracy. Synthetic tests were performed using the "true" hypocenter and station distribution to rough1y evaluate the extension of the areas most densely spanned by the ray paths; the agreement between synthetic and computed models is more satisfactory at Moho depths than in the upper crust. The qua1ity of the model resulting from inversion of real data is examined by the ca1culation of the Spread Function (Toomey and Foulger, 1989. The 3-D crustal P-wave velocity mode1 of the Italian region shows remarkab1e trends at Moho depths: the areas east of the Apennines call for positive adjustments of the initial velocity va1ue, while the west region shows negative ad- justments. The correspondence among the main features of the velocity field, the map of Moho isobaths and the map of the gravity anoma1ies is also outlined.

  14. Monitoring a temporal change of seismic velocity in a geothermal reservoir; Chinetsu choryuso hendo ni tomonau jishinha sokudo henka kenshutsu no kokoromi

    Energy Technology Data Exchange (ETDEWEB)

    Sugihara, M; Nishi, Y; Tosha, T [Geological Survey of Japan, Tsukuba (Japan)

    1997-10-22

    Data derived at the Kakkonda geothermal area were used to discuss functions of monitoring a temporal change of seismic velocity in geothermal reservoir. The data were selected from about 50 microtremors generated in the vicinity of the area during one year in 1986. Two out of the selected microtremors were earthquakes with a magnitude of 2.7 both accompanying small precursor events. The magnitude of 2.7 may be small under normal definition, but the earthquakes are thought relatively strong because the degree of fracture adjacent to the reservoir is concentrated in a small space. This condition could be a cause of expansion of the fracture zone. The analysis was carried out according what is described by Ratdomopurbo and Poupinet. More specifically, certain time sections were taken on each certain time to fit it with the initial movement time of P-waves on two similar earthquakes, cross spectra were calculated, and phase difference in the two earthquakes was evaluated from the phase spectra. As a result, no distinct change was detected in the velocity. 5 figs.

  15. Application of RVA and Time-Lapse Photography to Explore Effects of Extent of Chlorination, Milling Extraction Rate, and Particle-Size Reduction of Flour on Cake-Baking Functionality

    Science.gov (United States)

    Three factors (extent of chlorination, milling extraction rate and particle-size reduction) in the cake-bakeing functionality of Croplan 594W flour were explored by Rapid Visco-Analyzer (RVA) and time-lapse photography. The extent of chlorination and milling extraction rate showed dramatic effects,...

  16. Seismic Velocity Structure of the San Jacinto Fault Zone from Double-Difference Tomography and Expected Distribution of Head Waves

    Science.gov (United States)

    Allam, A. A.; Ben-Zion, Y.

    2010-12-01

    We present initial results of double-difference tomographic images for the velocity structure of the San Jacinto Fault Zone (SJFZ), and related 3D forward calculations of waves in the immediate vicinity of the SJFZ. We begin by discretizing the SJFZ region with a uniform grid spacing of 500 m, extending 140 km by 80 km and down to 25 km depth. We adopt the layered 1D model of Dreger & Helmberger (1993) as a starting model for this region, and invert for 3D distributions of VP and VS with the double-difference tomography of Zhang & Thurber (2003), which makes use of absolute event-station travel times as well as relative travel times for phases from nearby event pairs. Absolute arrival times of over 78,000 P- and S-wave phase picks generated by 1127 earthquakes and recorded at 70 stations near the SJFZ are used. Only data from events with Mw greater than 2.2 are used. Though ray coverage is limited at shallow depths, we obtain relatively high-resolution images from 4 to 13 km which show a clear contrast in velocity across the NW section of the SJFZ. To the SE, in the so-called trifurcation area, the structure is more complicated, though station coverage is poorest in this region. Using the obtained image, the current event locations, and the 3D finite-difference code of Olsen (1994), we estimate the likely distributions of fault zone head waves as a tool for future deployment of instrument. We plan to conduct further studies by including more travel time picks, including those from newly-deployed stations in the SJFZ area, in order to gain a more accurate image of the velocity structure.

  17. Stochastic velocity inversion of seismic reflection/refraction traveltime data for rift structure of the southwest Barents Sea

    DEFF Research Database (Denmark)

    Clark, Stephen A.; Faleide, Jan Inge; Hauser, Juerg

    2013-01-01

    reflection profiles. We utilize layer-based raytracing in a Markov Chain Monte Carlo (MCMC) inversion to determine a probabilistic velocity model constraining the sedimentary rocks, crystalline crust, and uppermost mantle in a complex tectonic regime. The profile images a wide range of crustal types and ages...... with the amount of overlap derived from published plate reconstructions. Local β factors approach 3, where Bjørnøya Basin reaches a depth of more than 13 km. Volcanics, carbonates, salt, diagenesis and metamorphism make deep sedimentary basin fill difficult to distinguish from original, pre-rift crystalline crust...

  18. Live Cells as Dynamic Laboratories: Time Lapse Raman Spectral Microscopy of Nanoparticles with Both IgE Targeting and pH-Sensing Functions

    Directory of Open Access Journals (Sweden)

    Kristy L. Nowak-Lovato

    2012-01-01

    Full Text Available This review captures the use of live cells as dynamic microlaboratories through implementation of labeled nanoparticles (nanosensors that have both sensing and targeting functions. The addition of 2,4-ε-dinitrophenol-L-lysine (DNP as a FcεRI targeting ligand and 4-mercaptopyridine (4-MPy as a pH-sensing ligand enables spatial and temporal monitoring of FcεRI receptors and their pH environment within the endocytic pathway. To ensure reliability, the sensor is calibrated in vivo using the ionophore nigericin and standard buffer solutions to equilibrate the external [H+] concentration with that of the cell compartments. This review highlights the nanosensors, ability to traffic and respond to pH of receptor-bound nanosensors (1 at physiological temperature (37°C versus room temperature (25°C, (2 after pharmacological treatment with bafilomycin, an H+ ATPase pump inhibitor, or amiloride, an inhibitor of Na+/H+ exchange, and (3 in response to both temperature and pharmacological treatment. Whole-cell, time lapse images are demonstrated to show the ability to transform live cells into dynamic laboratories to monitor temporal and spatial endosomal pH. The versatility of these probes shows promise for future applications relevant to intracellular trafficking and intelligent drug design.

  19. Revelation of Different Nanoparticle-Uptake Behavior in Two Standard Cell Lines NIH/3T3 and A549 by Flow Cytometry and Time-Lapse Imaging

    Directory of Open Access Journals (Sweden)

    André Jochums

    2017-07-01

    Full Text Available The uptake of nanomaterials into different cell types is a central pharmacological issue for the determination of nanotoxicity as well as for the development of drug delivery strategies. Most responses of the cells depend on their intracellular interactions with nanoparticles (NPs. Uptake behavior can be precisely investigated in vitro, with sensitive high throughput methods such as flow cytometry. In this study, we investigated two different standard cell lines, human lung carcinoma (A549 and mouse fibroblast (NIH/3T3 cells, regarding their uptake behavior of titanium dioxide NPs. Cells were incubated with different concentrations of TiO2 NPs and samples were taken at certain time points to compare the uptake kinetics of both cell lines. Samples were analyzed with the help of flow cytometry by studying changes in the side and forward scattering signal. To additionally enable a detection via fluorescence, NPs were labeled with the fluorescent dye fluorescein isothiocyanate (FITC and propidium iodide (PI. We found that NIH/3T3 cells take up the studied NPs more efficiently than A549 cells. These findings were supported by time-lapse microscopic imaging of the cells incubated with TiO2 NPs. Our results confirm that the uptake behavior of individual cell types has to be considered before interpreting any results of nanomaterial studies.

  20. Proliferation kinetics of cultured cells after irradiation with X-rays and 14 MeV neutrons studied by time-lapse cinematography

    Energy Technology Data Exchange (ETDEWEB)

    Kooi, M.W.; Stap, J.; Barendsen, G.W. (Amsterdam Univ. (Netherlands). Lab. for Radiobiology)

    1984-06-01

    Exponentially growing cells of an established line derived from a mouse osteosarcoma (MOS) have been studied by time-lapse cinematography after irradiation with 3 Gy of 200 kV X- rays or 1.5 Gy of 14 MeV neutrons. The results show that the radiation doses applied cause an equal elongation of the mean cell cycle time Tsub(c), which is largest in the irradiated cells but persists in the three subsequent generations. After 3 Gy of X-rays, mitotic delay is largest in cells irradiated in later stages of the cycle, but this difference is not observed after 1.5 Gy of 14 MeV neutrons. In subsequent generations the Tsub(c) values show larger variations among descendents of cells treated in the same stage of the cycle as compared to controls but this variation is equal for the doses of X-rays and neutrons applied. Division probability was significantly reduced in irradiated cells as well as in subsequent generations, whereas with neutrons as compared to X-rays the damage is expressed in earlier generations, with less variation as a function of the cell cycle.

  1. New algorithm to determine true colocalization in combination with image restoration and time-lapse confocal microscopy to MAP kinases in mitochondria.

    Directory of Open Access Journals (Sweden)

    Jorge Ignacio Villalta

    Full Text Available The subcellular localization and physiological functions of biomolecules are closely related and thus it is crucial to precisely determine the distribution of different molecules inside the intracellular structures. This is frequently accomplished by fluorescence microscopy with well-characterized markers and posterior evaluation of the signal colocalization. Rigorous study of colocalization requires statistical analysis of the data, albeit yet no single technique has been established as a standard method. Indeed, the few methods currently available are only accurate in images with particular characteristics. Here, we introduce a new algorithm to automatically obtain the true colocalization between images that is suitable for a wide variety of biological situations. To proceed, the algorithm contemplates the individual contribution of each pixel's fluorescence intensity in a pair of images to the overall Pearsońs correlation and Manders' overlap coefficients. The accuracy and reliability of the algorithm was validated on both simulated and real images that reflected the characteristics of a range of biological samples. We used this algorithm in combination with image restoration by deconvolution and time-lapse confocal microscopy to address the localization of MEK1 in the mitochondria of different cell lines. Appraising the previously described behavior of Akt1 corroborated the reliability of the combined use of these techniques. Together, the present work provides a novel statistical approach to accurately and reliably determine the colocalization in a variety of biological images.

  2. CellDyM: A room temperature operating cryogenic cell for the dynamic monitoring of snow metamorphism by time-lapse X-ray microtomography

    Science.gov (United States)

    Calonne, N.; Flin, F.; Lesaffre, B.; Dufour, A.; Roulle, J.; Puglièse, P.; Philip, A.; Lahoucine, F.; Geindreau, C.; Panel, J.-M.; Roscoat, S. Rolland; Charrier, P.

    2015-05-01

    Monitoring the time evolution of snow microstructure in 3-D is crucial for a better understanding of snow metamorphism. We, therefore, designed a cryogenic cell that precisely controls the experimental conditions of a sample while it is scanned by X-ray tomography. Based on a thermoelectrical regulation and a vacuum insulation, the cell operates at room temperature. It is, thus, adaptable to diverse scanners, offering advantages in terms of imaging techniques, resolution, and speed. Three-dimensional time-lapse series were obtained under equitemperature and temperature gradient conditions at a 7.8 μm precision. The typical features of each metamorphism and the anisotropic faceting behavior between the basal and prismatic planes, known to occur close to -2°C, were observed in less than 30 h. These results are consistent with the temperature fields expected from heat conduction simulations through the cell. They confirm the cell's accuracy and the interest of relatively short periods to study snow metamorphism.

  3. Time-lapse camera observations of gas piston activity at Pu‘u ‘Ō‘ō, Kīlauea volcano, Hawai‘i

    Science.gov (United States)

    Orr, Tim R.; Rea, James

    2012-01-01

    Gas pistoning is a type of eruptive behavior described first at Kīlauea volcano and characterized by the (commonly) cyclic rise and fall of the lava surface within a volcanic vent or lava lake. Though recognized for decades, its cause continues to be debated, and determining why and when it occurs has important implications for understanding vesiculation and outgassing processes at basaltic volcanoes. Here, we describe gas piston activity that occurred at the Pu‘u ‘Ō‘ō cone, in Kīlauea’s east rift zone, during June 2006. Direct, detailed measurements of lava level, made from time-lapse camera images captured at close range, show that the gas pistons during the study period lasted from 2 to 60 min, had volumes ranging from 14 to 104 m3, displayed a slowing rise rate of the lava surface, and had an average gas release duration of 49 s. Our data are inconsistent with gas pistoning models that invoke gas slug rise or a dynamic pressure balance but are compatible with models which appeal to gas accumulation and loss near the top of the lava column, possibly through the generation and collapse of a foam layer.

  4. Proliferation kinetics of cultured cells after irradiation with X-rays and 14 MeV neutrons studied by time-lapse cinematography.

    Science.gov (United States)

    Kooi, M W; Stap, J; Barendsen, G W

    1984-06-01

    Exponentially growing cells of an established line derived from a mouse osteosarcoma (MOS) have been studied by time-lapse cinematography after irradiation with 3 Gy of 200 kV X-rays or 1.5 Gy of 14 MeV neutrons. Cell cycle times (Tc) of individual cells and their progeny in three subsequent generations as well as the occurrence of aberrant mitosis have been determined to evaluate the variation in expression of damage in relation to the stage in the intermitotic cycle and the radiation quality. The results show that the radiation doses applied cause an equal elongation of the mean Tc, which is largest in the irradiated cells but persists in the three subsequent generations. After 3 Gy of X-rays, mitotic delay is largest in cells irradiated in later stages of the cycle, but this difference is not observed after 1.5 Gy of 14 MeV neutrons. In subsequent generations the Tc values show larger variations among descendents of cells treated in the same stage of the cycle as compared to controls but this variation is equal for the doses of X-rays and neutrons applied. Division probability was significantly reduced in irradiated cells as well as in subsequent generations, whereby with neutrons as compared to X-rays the damage is expressed in earlier generations, with less variation as a function of the cell cycle.

  5. Visualization of living terminal hypertrophic chondrocytes of growth plate cartilage in situ by differential interference contrast microscopy and time-lapse cinematography.

    Science.gov (United States)

    Farnum, C E; Turgai, J; Wilsman, N J

    1990-09-01

    The functional unit within the growth plate consists of a column of chondrocytes that passes through a sequence of phases including proliferation, hypertrophy, and death. It is important to our understanding of the biology of the growth plate to determine if distal hypertrophic cells are viable, highly differentiated cells with the potential of actively controlling terminal events of endochondral ossification prior to their death at the chondro-osseous junction. This study for the first time reports on the visualization of living hypertrophic chondrocytes in situ, including the terminal hypertrophic chondrocyte. Chondrocytes in growth plate explants are visualized using rectified differential interference contrast microscopy. We record and measure, using time-lapse cinematography, the rate of movement of subcellular organelles at the limit of resolution of this light microscopy system. Control experiments to assess viability of hypertrophic chondrocytes include coincubating organ cultures with the intravital dye fluorescein diacetate to assess the integrity of the plasma membrane and cytoplasmic esterases. In this system, all hypertrophic chondrocytes, including the very terminal chondrocyte, exist as rounded, fully hydrated cells. By the criteria of intravital dye staining and organelle movement, distal hypertrophic chondrocytes are identical to chondrocytes in the proliferative and early hypertrophic cell zones.

  6. Proliferation kinetics of cultured cells after irradiation with X-rays and 14 MeV neutrons studied by time-lapse cinematography

    International Nuclear Information System (INIS)

    Kooi, M.W.; Stap, J.; Barendsen, G.W.

    1984-01-01

    Exponentially growing cells of an established line derived from a mouse osteosarcoma (MOS) have been studied by time-lapse cinematography after irradiation with 3 Gy of 200 kV X- rays or 1.5 Gy of 14 MeV neutrons. The results show that the radiation doses applied cause an equal elongation of the mean cell cycle time Tsub(c), which is largest in the irradiated cells but persists in the three subsequent generations. After 3 Gy of X-rays, mitotic delay is largest in cells irradiated in later stages of the cycle, but this difference is not observed after 1.5 Gy of 14 MeV neutrons. In subsequent generations the Tsub(c) values show larger variations among descendents of cells treated in the same stage of the cycle as compared to controls but this variation is equal for the doses of X-rays and neutrons applied. Division probability was significantly reduced in irradiated cells as well as in subsequent generations, whereas with neutrons as compared to X-rays the damage is expressed in earlier generations, with less variation as a function of the cell cycle. (author)

  7. Temporal change in shallow subsurface P- and S-wave velocities and S-wave anisotropy inferred from coda wave interferometry

    Science.gov (United States)

    Yamamoto, M.; Nishida, K.; Takeda, T.

    2012-12-01

    Recent progresses in theoretical and observational researches on seismic interferometry reveal the possibility to detect subtle change in subsurface seismic structure. This high sensitivity of seismic interferometry to the medium properties may thus one of the most important ways to directly observe the time-lapse behavior of shallow crustal structure. Here, using the coda wave interferometry, we show the co-seismic and post-seismic changes in P- and S-wave velocities and S-wave anisotropy associated with the 2011 off the Pacific coast of Tohoku earthquake (M9.0). In this study, we use the acceleration data recorded at KiK-net stations operated by NIED, Japan. Each KiK-net station has a borehole whose typical depth is about 100m, and two three-component accelerometers are installed at the top and bottom of the borehole. To estimate the shallow subsurface P- and S-wave velocities and S-wave anisotropy between two sensors and their temporal change, we select about 1000 earthquakes that occurred between 2004 and 2012, and extract body waves propagating between borehole sensors by computing the cross-correlation functions (CCFs) of 3 x 3 component pairs. We use frequency bands of 2-4, 4-8, 8-16 Hz in our analysis. Each averaged CCF shows clear wave packets traveling between borehole sensors, and their travel times are almost consistent with those of P- and S-waves calculated from the borehole log data. Until the occurrence of the 2011 Tohoku earthquake, the estimated travel time at each station is rather stable with time except for weak seasonal/annual variation. On the other hand, the 2011 Tohoku earthquake and its aftershocks cause sudden decrease in the S-wave velocity at most of the KiK-net stations in eastern Japan. The typical value of S-wave velocity changes, which are measured by the time-stretching method, is about 5-15%. After this co-seismic change, the S-wave velocity gradually recovers with time, and the recovery continues for over one year following the

  8. Seismic velocity structure of the crust and upper mantle beneath the Texas-Gulf of Mexico margin from joint inversion of Ps and Sp receiver functions and surface wave dispersion

    Science.gov (United States)

    Agrawal, M.; Pulliam, J.; Sen, M. K.

    2013-12-01

    The seismic structure beneath Texas Gulf Coast Plain (GCP) is determined via velocity analysis of stacked common conversion point (CCP) Ps and Sp receiver functions and surface wave dispersion. The GCP is a portion of a ocean-continental transition zone, or 'passive margin', where seismic imaging of lithospheric Earth structure via passive seismic techniques has been rare. Seismic data from a temporary array of 22 broadband stations, spaced 16-20 km apart, on a ~380-km-long profile from Matagorda Island, a barrier island in the Gulf of Mexico, to Johnson City, Texas were employed to construct a coherent image of the crust and uppermost mantle. CCP stacking was applied to data from teleseismic earthquakes to enhance the signal-to-noise ratios of converted phases, such as Ps phases. An inaccurate velocity model, used for time-to-depth conversion in CCP stacking, may produce higher errors, especially in a region of substantial lateral velocity variations. An accurate velocity model is therefore essential to constructing high quality depth-domain images. To find accurate velocity P- and S-wave models, we applied a joint modeling approach that searches for best-fitting models via simulated annealing. This joint inversion approach, which we call 'multi objective optimization in seismology' (MOOS), simultaneously models Ps receiver functions, Sp receiver functions and group velocity surface wave dispersion curves after assigning relative weights for each objective function. Weights are computed from the standard deviations of the data. Statistical tools such as the posterior parameter correlation matrix and posterior probability density (PPD) function are used to evaluate the constraints that each data type places on model parameters. They allow us to identify portions of the model that are well or poorly constrained.

  9. Gigavision - A weatherproof, multibillion pixel resolution time-lapse camera system for recording and tracking phenology in every plant in a landscape

    Science.gov (United States)

    Brown, T.; Borevitz, J. O.; Zimmermann, C.

    2010-12-01

    retrieved at bi-weekly intervals. Our longer-term goal is to make gigapixel time-lapse datasets available online in an interactive interface that layers plant-level phenology data with gigapixel resolution images, genomic sequence data from individual plants with weather and other abitotic sensor data. Co-visualization of all of these data types provides researchers with a powerful new tool for examining complex ecological interactions across scales from the individual to the ecosystem. We will present detailed phenostage data from more than 100 plants of multiple species from our Gigavision timelapse camera at our “Big Blowout East” field site in the Indiana Dunes State Park, IN. This camera has been recording three to four 700 million pixel images a day since February 28, 2010. The camera field of view covers an area of about 7 hectares resulting in an average image resolution of about 1 pixel per centimeter over the entire site. We will also discuss some of the many technological challenges with developing and maintaining these types of hardware systems, collecting quantitative data from gigapixel resolution time-lapse data and effectively managing terabyte-sized datasets of millions of images.

  10. The use of computerized video time lapse to study cell death in rat embryo cells transfected with c-ha-ras or c-myc

    International Nuclear Information System (INIS)

    Forrester, H.B.; Vidair, C.A.; Dewey, W.C.; Ling, C.C.

    1998-01-01

    Full text: Individual rat embryo fibroblasts that had been transfected with the c-myc (REC:myc) or c-Ha ras (REC:ras) oncogene were followed after irradiation using a computer video time lapse (CVTL) system in order to quantify the lethal events that resulted in loss of clonogenic survival after irradiation. By followed the cells for 2 to 3 generations before irradiation we were able to determine where they were in the cell cycle at the time of irradiation for cell cycle analysis. After irradiation, the individual cells and their progeny were followed in multiple fields for 5-6 days Then, pedigrees for individual irradiated cells were determined by noting the times of divisions fusions, and cell death. After X-irradiation, the clonogenic survival values for these two cell lines are similar. However, by using computerized video time lapse (CVTL) to follow individual cells we found that the loss of clonogenic survival was due to two different processes, cell death and a senescent-like process. The loss of clonogenic survival of x-irradiated (9.5 and 4 Gy) REC:myc cells was attributed almost entirely to the cells dying by apoptosis (∼99 and 90%). In contrast, approximately 60% of the x-irradiated (9.5 Gy) non-clonogenic REC:ras cells died by apoptosis (with a very small amount of necrosis), and the other 40% underwent a senescent-type process in which some of the cells and their progeny stopped dividing but remained as viable cells throughout 140 hours of observation. Both processes usually occurred after the cells had divided and continued to occur in the cells' progeny for up to five divisions after irradiation. The mode of cell death in the progeny of a non-clonogenic cell can be determined only by using CVTL and can not be determined by conventional clonogenic survival experiments. Also, only by following the individual cells and their progeny can the true amount of apoptosis be determined. The cumulative percentage of apoptosis scored in whole populations

  11. Ambient Seismic Imaging of Hydraulically Active Fractures at km Depths

    Science.gov (United States)

    Malin, P. E.; Sicking, C.

    2017-12-01

    Streaming Depth Images of ambient seismic signals using numerous, densely-distributed, receivers have revealed their connection to hydraulically active fractures at 0.5 to 5 km depths. Key for this type of imaging is very high-fold stacking over both multiple receives and periods of a few hours. Also important is suppression of waveforms from fixed, repeating sources such as pumps, generators, and traffic. A typical surface-based ambient SDI survey would use a 3D seismic receiver grid. It would have 1,000 to 4,000 uniformly distributed receivers at a density of 50/km2over the target. If acquired by borehole receivers buried 100 m deep, the density can be dropped by an order of magnitude. We show examples of the acquisition and signal processing scenarios used to produce the ambient images. (Sicking et al., SEG Interpretation, Nov 2017.) While the fracture-fluid source connection of SDI has been verified by drilling and various types of hydraulic tests, the precise nature of the signal's origin is not clear. At the current level of observation, the signals do not have identifiable phases, but can be focused using P wave velocities. Suggested sources are resonances of pressures fluctuations in the fractures, or small, continuous, slips on fractures surfaces. In either case, it appears that the driving mechanism is tectonic strain in an inherently unstable crust. Solid earth tides may enhance these strains. We illustrate the value of the ambient SDI method in its industrial application by showing case histories from energy industry and carbon-capture-sequestration projects. These include ambient images taken before, during, and after hydraulic treatments in un-conventional reservoirs. The results show not only locations of active fractures, but also their time responses to stimulation and production. Time-lapse ambient imaging can forecast and track events such as well interferences and production changes that can result from nearby treatments.

  12. The turbulent life of juvenile icebergs: Observations from an array of high-rate time-lapse cameras in LeConte Bay, Alaska

    Science.gov (United States)

    Kienholz, C.; Amundson, J. M.; Jackson, R. H.; Motyka, R. J.; Nash, J. D.; Sutherland, D.

    2017-12-01

    Tidewater glacier behavior is driven by poorly understood processes occurring at the ice-ocean interface, including sedimentation and erosion, iceberg calving, and submarine melting. These processes are inherently difficult to observe, calling for innovative field techniques and numerical models. As part of a multi-year field effort to constrain ocean-glacier heat and mass exchange, we deployed an array of high-rate time-lapse cameras (sampling intervals between 15 seconds and 2 minutes) to monitor the terminus of LeConte Glacier and its proglacial fjord. The camera array has operated continuously for more than a year. Our high sampling rates enable tracking of iceberg motion with optical flow algorithms, which have been used widely in computer vision but less so in glaciology and oceanography. Such algorithms track individual features (e.g., corners of icebergs), which is ideal for iceberg-rich fjords, where motion can vary substantially over short temporal and spatial scales (e.g., due to complex surface currents or different iceberg sizes). We process our data to quantify subdaily to seasonal patterns in surface currents and relate them to forcing from tides, wind, and glacier runoff. Flow is most variable close to the glacier terminus due to frequent calving events and turbulent plume dynamics. Farther down fjord, more consistent patterns emerge, driven by tides, wind, and runoff and altered by fjord geometry. Our tracking results compare favorably to and complement our Acoustic Doppler Current Profiler measurements from boats and moorings. Given their high spatial and temporal resolution, our observations will place important surface constraints on forthcoming hydrodynamic modeling efforts. The deployment of the cameras in a harsh environment and the corresponding image processing provided an opportunity to test hardware and software thoroughly, which will prove useful for similar systems at other glaciers.

  13. Understanding leachate flow in municipal solid waste landfills by combining time-lapse ERT and subsurface flow modelling - Part II: Constraint methodology of hydrodynamic models.

    Science.gov (United States)

    Audebert, M; Oxarango, L; Duquennoi, C; Touze-Foltz, N; Forquet, N; Clément, R

    2016-09-01

    Leachate recirculation is a key process in the operation of municipal solid waste landfills as bioreactors. To ensure optimal water content distribution, bioreactor operators need tools to design leachate injection systems. Prediction of leachate flow by subsurface flow modelling could provide useful information for the design of such systems. However, hydrodynamic models require additional data to constrain them and to assess hydrodynamic parameters. Electrical resistivity tomography (ERT) is a suitable method to study leachate infiltration at the landfill scale. It can provide spatially distributed information which is useful for constraining hydrodynamic models. However, this geophysical method does not allow ERT users to directly measure water content in waste. The MICS (multiple inversions and clustering strategy) methodology was proposed to delineate the infiltration area precisely during time-lapse ERT survey in order to avoid the use of empirical petrophysical relationships, which are not adapted to a heterogeneous medium such as waste. The infiltration shapes and hydrodynamic information extracted with MICS were used to constrain hydrodynamic models in assessing parameters. The constraint methodology developed in this paper was tested on two hydrodynamic models: an equilibrium model where, flow within the waste medium is estimated using a single continuum approach and a non-equilibrium model where flow is estimated using a dual continuum approach. The latter represents leachate flows into fractures. Finally, this methodology provides insight to identify the advantages and limitations of hydrodynamic models. Furthermore, we suggest an explanation for the large volume detected by MICS when a small volume of leachate is injected. Copyright © 2016 Elsevier Ltd. All rights reserved.

  14. Spatial and temporal variations of thaw layer thickness and its controlling factors identified using time-lapse electrical resistivity tomography and hydro-thermal modeling

    Science.gov (United States)

    Tran, Anh Phuong; Dafflon, Baptiste; Bisht, Gautam; Hubbard, Susan S.

    2018-06-01

    Quantitative understanding of controls on thaw layer thickness (TLT) dynamics in the Arctic peninsula is essential for predictive understanding of permafrost degradation feedbacks to global warming and hydrobiochemical processes. This study jointly interprets electrical resistivity tomography (ERT) measurements and hydro-thermal numerical simulation results to assess spatiotemporal variations of TLT and to determine its controlling factors in Barrow, Alaska. Time-lapse ERT measurements along a 35-m transect were autonomously collected from 2013 to 2015 and inverted to obtain soil electrical resistivity. Based on several probe-based TLT measurements and co-located soil electrical resistivity, we estimated the electrical resistivity thresholds associated with the boundary between the thaw layer and permafrost using a grid search optimization algorithm. Then, we used the obtained thresholds to derive the TLT from all soil electrical resistivity images. The spatiotemporal analysis of the ERT-derived TLT shows that the TLT at high-centered polygons (HCPs) is smaller than that at low-centered polygons (LCPs), and that both thawing and freezing occur earlier at the HCPs compared to the LCPs. In order to provide a physical explanation for dynamics in the thaw layer, we performed 1-D hydro-thermal simulations using the community land model (CLM). Simulation results showed that air temperature and precipitation jointly govern the temporal variations of TLT, while the topsoil organic content (SOC) and polygon morphology are responsible for its spatial variations. When the topsoil SOC and its thickness increase, TLT decreases. Meanwhile, at LCPs, a thicker snow layer and saturated soil contribute to a thicker TLT and extend the time needed for TLT to freeze and thaw. This research highlights the importance of combination of measurements and numerical modeling to improve our understanding spatiotemporal variations and key controls of TLT in cold regions.

  15. Remotely Measuring Trash Fluxes in the Flood Canals of Megacities with Time Lapse Cameras and Computer Vision Algorithms - a Case Study from Jakarta, Indonesia.

    Science.gov (United States)

    Sedlar, F.; Turpin, E.; Kerkez, B.

    2014-12-01

    As megacities around the world continue to develop at breakneck speeds, future development, investment, and social wellbeing are threatened by a number of environmental and social factors. Chief among these is frequent, persistent, and unpredictable urban flooding. Jakarta, Indonesia with a population of 28 million, is a prime example of a city plagued by such flooding. Yet although Jakarta has ample hydraulic infrastructure already in place with more being constructed, the increasingly severity of the flooding it experiences is not from a lack of hydraulic infrastructure but rather a failure of existing infrastructure. As was demonstrated during the most recent floods in Jakarta, the infrastructure failure is often the result of excessive amounts of trash in the flood canals. This trash clogs pumps and reduces the overall system capacity. Despite this critical weakness of flood control in Jakarta, no data exists on the overall amount of trash in the flood canals, much less on how it varies temporally and spatially. The recent availability of low cost photography provides a means to obtain such data. Time lapse photography postprocessed with computer vision algorithms yields a low cost, remote, and automatic solution to measuring the trash fluxes. When combined with the measurement of key hydrological parameters, a thorough understanding of the relationship between trash fluxes and the hydrology of massive urban areas becomes possible. This work examines algorithm development, quantifying trash parameters, and hydrological measurements followed by data assimilation into existing hydraulic and hydrological models of Jakarta. The insights afforded from such an approach allows for more efficient operating of hydraulic infrastructure, knowledge of when and where critical levels of trash originate from, and the opportunity for community outreach - which is ultimately needed to reduce the trash in the flood canals of Jakarta and megacities around the world.

  16. Prevalence of human immunodeficiency virus RNA and antibody in first-time, lapsed, and repeat blood donations across five international regions and relative efficacy of alternative screening scenarios.

    Science.gov (United States)

    Bruhn, Roberta; Lelie, Nico; Custer, Brian; Busch, Michael; Kleinman, Steven

    2013-10-01

    Twenty-one blood organizations from five geographical regions provided HIV individual donation (ID)-NAT and serology data on 11,787,610 donations. Infections were classified as anti-HIV-/RNA+ window period (WP), anti-HIV+/RNA+ concordant positive (CP) or anti-HIV+/RNA- elite controller (EC). Residual risk and efficacy of several screening scenarios were estimated for first time, lapsed and repeat donations. WP residual risk estimates assumed a 50% infectious dose of 3.16 virions and a 50% detection limit of 2.7 HIV RNA copies/mL for ID-NAT and 10,000 copies/mL for p24Ag. Infectivity for CP (100%) and EC (2.2%) donations was estimated based on viral load distributions and 100-fold reduced infectivity by antibody neutralization as reported elsewhere. Efficacy was calculated as proportion of transmission risk removed from baseline (i.e. in absence of any screening). There was no significant difference in transmission risk between lapsed and repeat donations in any region. Risk was 3.8-fold higher in first time than combined lapsed/repeat donations in South Africa but not in other regions. Screening strategies were most efficacious at interdicting infectious transfusions in first time (98.7-99.8%) followed by lapsed (97.6-99.7%) and repeat (86.8-97.7%) donations in all regions combined. In each donor category the efficacy of ID-NAT alone (97.7-99.8%) was superior to that of minipool (MP)-NAT/anti-HIV (95.0-99.6%) and p24 Ag/anti-HIV (89.8-99.1%). Efficacy patterns were similar by donor/donation status in each region despite large differences in HIV prevalence and transmission risk. As similar data become available for HBV and HCV, this modeling may be useful in cost effectiveness analyses of alternative testing scenarios. © 2013 American Association of Blood Banks.

  17. Vapor flux and recrystallization during dry snow metamorphism under a steady temperature gradient as observed by time-lapse micro-tomography

    Directory of Open Access Journals (Sweden)

    B. R. Pinzer

    2012-10-01

    Full Text Available Dry snow metamorphism under an external temperature gradient is the most common type of recrystallization of snow on the ground. The changes in snow microstructure modify the physical properties of snow, and therefore an understanding of this process is essential for many disciplines, from modeling the effects of snow on climate to assessing avalanche risk. We directly imaged the microstructural changes in snow during temperature gradient metamorphism (TGM under a constant gradient of 50 K m−1, using in situ time-lapse X-ray micro-tomography. This novel and non-destructive technique directly reveals the amount of ice that sublimates and is deposited during metamorphism, in addition to the exact locations of these phase changes. We calculated the average time that an ice volume stayed in place before it sublimated and found a characteristic residence time of 2–3 days. This means that most of the ice changes its phase from solid to vapor and back many times in a seasonal snowpack where similar temperature conditions can be found. Consistent with such a short timescale, we observed a mass turnover of up to 60% of the total ice mass per day. The concept of hand-to-hand transport for the water vapor flux describes the observed changes very well. However, we did not find evidence for a macroscopic vapor diffusion enhancement. The picture of {temperature gradient metamorphism} produced by directly observing the changing microstructure sheds light on the micro-physical processes and could help to improve models that predict the physical properties of snow.

  18. Blastocyst development in single medium with or without renewal on day 3: a prospective cohort study on sibling donor oocytes in a time-lapse incubator.

    Science.gov (United States)

    Costa-Borges, Nuno; Bellés, Marta; Meseguer, Marcos; Galliano, Daniela; Ballesteros, Agustin; Calderón, Gloria

    2016-03-01

    To evaluate the efficiency of using a continuous (one-step) protocol with a single medium for the culture of human embryos in a time-lapse incubator (TLI). Prospective cohort study on sibling donor oocytes. University-affiliated in vitro fertilization (IVF) center. Embryos from 59 patients. Culture in a TLI in a single medium with or without renewal of the medium on day-3. Embryo morphology and morphokinetic parameters, clinical pregnancy, take-home baby rate, and perinatal outcomes. The blastocyst rates (68.3 vs. 66.8%) and the proportion of good-quality blastocysts (transferred plus frozen) obtained with the two-step (80.0%) protocol were statistically significantly similar to those obtained in the one-step protocol (72.2%). Similarly, morphokinetic events from early cleavage until late blastocyst stages were statistically significantly equivalent between both groups. No differences were found either in clinical pregnancy rates when comparing pure transfers performed with embryos selected from the two-step (75.0%), one-step (70.0%, respectively), and mixed (57.1%) groups. A total of 55 out of 91 embryos transferred implanted successfully (60.4%), resulting in a total of 37 newborns with a comparable birth weight mean among groups. Our findings support the idea that in a TLI with a controlled air purification system, human embryos can be successfully cultured continuously from day 0 onward in single medium with no need to renew it on day-3. This strategy does not affect embryo morphokinetics or development to term and offers more stable culture conditions for embryos as well as practical advantages and reduced costs for the IVF laboratory. Copyright © 2016 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.

  19. Time-lapse cinematography-compatible polystyrene-based microwell culture system: a novel tool for tracking the development of individual bovine embryos.

    Science.gov (United States)

    Sugimura, Satoshi; Akai, Tomonori; Somfai, Tamás; Hirayama, Muneyuki; Aikawa, Yoshio; Ohtake, Masaki; Hattori, Hideshi; Kobayashi, Shuji; Hashiyada, Yutaka; Konishi, Kazuyuki; Imai, Kei

    2010-12-01

    We have developed a polystyrene-based well-of-the-well (WOW) system using injection molding to track individual embryos throughout culture using time-lapse cinematography (TLC). WOW culture of bovine embryos following in vitro fertilization was compared with conventional droplet culture (control). No differences between control- and WOW-cultured embryos were observed during development to the blastocyst stage. Morphological quality and inner cell mass (ICM) and trophectoderm (TE) cell numbers were not different between control- and WOW-derived blastocysts; however, apoptosis in both the ICM and TE cells was reduced in WOW culture (P < 0.01). Oxygen consumption in WOW-derived blastocysts was closer to physiological level than that of control-derived blastocysts. Moreover, WOW culture improved embryo viability, as indicated by increased pregnancy rates at Days 30 and 60 after embryo transfer (P < 0.05). TLC monitoring was performed to evaluate the cleavage pattern and the duration of the first cell cycle of embryos from oocytes collected by ovum pickup; correlations with success of pregnancy were determined. Logistic regression analysis indicated that the cleavage pattern correlated with success of pregnancy (P < 0.05), but cell cycle length did not. Higher pregnancy rates (66.7%) were observed for animals in which transferred blastocysts had undergone normal cleavage, identified by the presence of two blastomeres of the same size without fragmentation, than among those with abnormal cleavage (33.3%). These results suggest that our microwell culture system is a powerful tool for producing and selecting healthy embryos and for identifying viability biomarkers.

  20. Monitoring the evolution and migration of a methane gas plume in an unconfined sandy aquifer using time-lapse GPR and ERT.

    Science.gov (United States)

    Steelman, Colby M; Klazinga, Dylan R; Cahill, Aaron G; Endres, Anthony L; Parker, Beth L

    2017-10-01

    Fugitive methane (CH 4 ) leakage associated with conventional and unconventional petroleum development (e.g., shale gas) may pose significant risks to shallow groundwater. While the potential threat of stray (CH 4 ) gas in aquifers has been acknowledged, few studies have examined the nature of its migration and fate in a shallow groundwater flow system. This study examines the geophysical responses observed from surface during a 72day field-scale simulated CH 4 leak in an unconfined sandy aquifer at Canadian Forces Base Borden, Canada, to better understand the transient behaviour of fugitive CH 4 gas in the subsurface. Time-lapse ground-penetrating radar (GPR) and electrical resistivity tomography (ERT) were used to monitor the distribution and migration of the gas-phase and assess any impacts to groundwater hydrochemistry. Geophysical measurements captured the transient formation of a CH 4 gas plume emanating from the injector, which was accompanied by an increase in total dissolved gas pressure (P TDG ). Subsequent reductions in P TDG were accompanied by reduced bulk resistivity around the injector along with an increase in the GPR reflectivity along horizontal bedding reflectors farther downgradient. Repeat temporal GPR reflection profiling identified three events with major peaks in reflectivity, interpreted to represent episodic lateral CH 4 gas release events into the aquifer. Here, a gradual increase in P TDG near the injector caused a sudden lateral breakthrough of gas in the direction of groundwater flow, causing free-phase CH 4 to migrate much farther than anticipated based on groundwater advection. CH 4 accumulated along subtle permeability boundaries demarcated by grain-scale bedding within the aquifer characteristic of numerous Borden-aquifer multi-phase flow experiments. Diminishing reflectivity over a period of days to weeks suggests buoyancy-driven migration to the vadose zone and/or CH 4 dissolution into groundwater. Lateral and vertical CH 4

  1. Application of quantitative time-lapse imaging (QTLI) for evaluation of Mrp2-based drug–drug interaction induced by liver metabolites

    Energy Technology Data Exchange (ETDEWEB)

    Nakanishi, Takeo; Ikenaga, Miho; Fukuda, Hajime; Matsunaga, Norikazu; Tamai, Ikumi, E-mail: tamai@p.kanazawa-w.ac.jp

    2012-09-01

    We previously reported a quantitative time-lapse imaging (QTLI)-based analysis method to assess drug–drug interactions (DDI) at multidrug resistance-associated protein 2 (Mrp2) in rat sandwich-cultured hepatocyte (SCH) system, utilizing the fluorescent Mrp2 substrate, 5-(and 6)-carboxy-2′,7′-dichlorofluorescein (CDF). Here, we aimed to examine the feasibility of using QTLI to evaluate DDI involving drug metabolite(s) generated in hepatocytes. We used estradiol (E2) and bilirubin as model compounds; both are not substrates of MRP2, whereas their hepatic metabolites, estradiol-17β-glucuronide (E17G) or bilirubin glucuronides, are known to be its substrates as well as inhibitors. When rat SCHs were pre-exposed with E2, fluorescence of CDF accumulated in bile canaliculi decreased depending upon both the duration of pre-exposure and the concentration of extracellular E2. The decrease corresponded with the increase in intracellular concentration of E17G in hepatocytes. Furthermore, cytotoxicity of vinblastine, a substrate of MRP2, was enhanced in SCHs treated with E2. Similarly, CDF accumulated in bile canaliculi was significantly reduced in rat SCHs pre-exposed with bilirubin. In conclusion, these results suggest that phase II biotransformation of a competitor is reflected in alteration of MRP2-mediated CDF transport detected in QTLI. The QTLI might provide a convenient platform to evaluate transporter-based DDIs involving hepatic metabolites of drug candidates without the need to identify the metabolites. -- Highlights: ► Mrp2-mediated CDF transport is inhibited by E2, but not E17G in vesicle study. ► Both E2 and E17G do not compromise CDF formation from CDFDA in hepatocytes. ► CDF accumulation in bile canaliculi is inhibited by E2 or E17G in QTLI. ► Increasing exposure to E2 decreases CDF accumulation in bile canaliculi in QTLI. ► QTLI is feasible to assess Mrp2-based DDI involving drug metabolite in hepatocytes.

  2. Application of quantitative time-lapse imaging (QTLI) for evaluation of Mrp2-based drug–drug interaction induced by liver metabolites

    International Nuclear Information System (INIS)

    Nakanishi, Takeo; Ikenaga, Miho; Fukuda, Hajime; Matsunaga, Norikazu; Tamai, Ikumi

    2012-01-01

    We previously reported a quantitative time-lapse imaging (QTLI)-based analysis method to assess drug–drug interactions (DDI) at multidrug resistance-associated protein 2 (Mrp2) in rat sandwich-cultured hepatocyte (SCH) system, utilizing the fluorescent Mrp2 substrate, 5-(and 6)-carboxy-2′,7′-dichlorofluorescein (CDF). Here, we aimed to examine the feasibility of using QTLI to evaluate DDI involving drug metabolite(s) generated in hepatocytes. We used estradiol (E2) and bilirubin as model compounds; both are not substrates of MRP2, whereas their hepatic metabolites, estradiol-17β-glucuronide (E17G) or bilirubin glucuronides, are known to be its substrates as well as inhibitors. When rat SCHs were pre-exposed with E2, fluorescence of CDF accumulated in bile canaliculi decreased depending upon both the duration of pre-exposure and the concentration of extracellular E2. The decrease corresponded with the increase in intracellular concentration of E17G in hepatocytes. Furthermore, cytotoxicity of vinblastine, a substrate of MRP2, was enhanced in SCHs treated with E2. Similarly, CDF accumulated in bile canaliculi was significantly reduced in rat SCHs pre-exposed with bilirubin. In conclusion, these results suggest that phase II biotransformation of a competitor is reflected in alteration of MRP2-mediated CDF transport detected in QTLI. The QTLI might provide a convenient platform to evaluate transporter-based DDIs involving hepatic metabolites of drug candidates without the need to identify the metabolites. -- Highlights: ► Mrp2-mediated CDF transport is inhibited by E2, but not E17G in vesicle study. ► Both E2 and E17G do not compromise CDF formation from CDFDA in hepatocytes. ► CDF accumulation in bile canaliculi is inhibited by E2 or E17G in QTLI. ► Increasing exposure to E2 decreases CDF accumulation in bile canaliculi in QTLI. ► QTLI is feasible to assess Mrp2-based DDI involving drug metabolite in hepatocytes.

  3. Monitoring snowmelt and solute transport at Oslo airport by combining time-lapse electrical resistivity, soil water sampling and tensiometer measurements

    Science.gov (United States)

    Bloem, E.; French, H. K.

    2013-12-01

    Monitoring contaminant transport at contaminated sites requires optimization of the configuration of a limited number of samplings points combined with heterogeneous flow and preferential flowpaths. Especially monitoring processes in the unsaturated zone is a major challenge due to the limited volume monitored by for example suction cups and their risk to clog in a highly active degradation zone. To make progress on soil contamination assessment and site characterization there is a strong need to integrate field-sale extensively instrumented tools, with non-invasive (geophysical) methods which provide spatially integrated measurements also in the unsaturated zone. Examples of sites that might require monitoring activities in the unsaturated zone are airports with winter frost where large quantities of de-icing chemicals are used each winter; salt and contaminant infiltration along roads; constructed infiltration systems for treatment of sewerage or landfill seepage. Electrical resistivity methods have proved to be useful as an indirect measurement of subsurface properties and processes at the field-scale. The non-uniqueness of the interpretation techniques can be reduced by constraining the inversion through the addition of independent geophysical measurements along the same profile. Or interpretation and understanding of geophysical images can be improved by the combination with classical measurements of soil physical properties, soil suction, contaminant concentration and temperatures. In our experiment, at the research field station at Gardermoen, Oslo airport, we applied a degradable de-icing chemical and an inactive tracer to the snow cover prior to snowmelt. To study the solute transport processes in the unsaturated zone time-lapse cross borehole electrical resistivity tomography (ERT) measurements were conducted at the same time as soil water samples were extracted at multiple depths with suction cups. Measurements of soil temperature, and soil tension were

  4. A low-cost landslide displacement activity assessment from time-lapse photogrammetry and rainfall data: Application to the Tessina landslide site

    Science.gov (United States)

    Gabrieli, F.; Corain, L.; Vettore, L.

    2016-09-01

    Acquiring useful and reliable displacement data from a complex landslide site is often a problem because of large, localized and scattered erosive processes and deformations; the inaccessibility of the site; the high cost of instrumentation and maintenance. However, these data are of fundamental importance not only to hazard assessments but also to understanding the processes at the basis of slope evolution. In this framework, time-lapse photogrammetry can represent a good compromise; the low accuracy is compensated for by the wide-ranging and dense spatial displacement information that can be obtained with inexpensive equipment. Nevertheless, when large displacement monitoring data sets become available, the problem becomes the choice of the most suitable statistical model to describe the probability of movement and adequately simplify the complexity of a scattered, intermittent, and spatially inhomogeneous displacement field. In this paper, an automated displacement detection method, which is based on the absolute image differences and digital correlations from a sequence of photos, was developed and applied to a photographic survey activity at the head of the Tessina landslide (northeastern Italy). The method allowed us to simplify and binarize the displacement field and to recognize the intermittent activity and the peculiar behaviours of different parts of the landslide, which were identified and classified by combining geomorphological and geological information. Moreover, for the first time, sliding correlations between these areas were quantitatively estimated using time-series-based binary logistic regression and the definition of a probability-based directed graph of displacement occurrence that connected the source zones to the lower depletion basin and the main collector channel. Using rainfall data, event-based logistic and Poisson regression models were applied to the upper zones of the landslide to estimate the probability of movement of each scarp

  5. Visualization of volumetric seismic data

    Science.gov (United States)

    Spickermann, Dela; Böttinger, Michael; Ashfaq Ahmed, Khawar; Gajewski, Dirk

    2015-04-01

    Mostly driven by demands of high quality subsurface imaging, highly specialized tools and methods have been developed to support the processing, visualization and interpretation of seismic data. 3D seismic data acquisition and 4D time-lapse seismic monitoring are well-established techniques in academia and industry, producing large amounts of data to be processed, visualized and interpreted. In this context, interactive 3D visualization methods proved to be valuable for the analysis of 3D seismic data cubes - especially for sedimentary environments with continuous horizons. In crystalline and hard rock environments, where hydraulic stimulation techniques may be applied to produce geothermal energy, interpretation of the seismic data is a more challenging problem. Instead of continuous reflection horizons, the imaging targets are often steep dipping faults, causing a lot of diffractions. Without further preprocessing these geological structures are often hidden behind the noise in the data. In this PICO presentation we will present a workflow consisting of data processing steps, which enhance the signal-to-noise ratio, followed by a visualization step based on the use the commercially available general purpose 3D visualization system Avizo. Specifically, we have used Avizo Earth, an extension to Avizo, which supports the import of seismic data in SEG-Y format and offers easy access to state-of-the-art 3D visualization methods at interactive frame rates, even for large seismic data cubes. In seismic interpretation using visualization, interactivity is a key requirement for understanding complex 3D structures. In order to enable an easy communication of the insights gained during the interactive visualization process, animations of the visualized data were created which support the spatial understanding of the data.

  6. A sensitivity analysis on seismic tomography data with respect to CO2 saturation of a CO2 geological sequestration field

    Science.gov (United States)

    Park, Chanho; Nguyen, Phung K. T.; Nam, Myung Jin; Kim, Jongwook

    2013-04-01

    Monitoring CO2 migration and storage in geological formations is important not only for the stability of geological sequestration of CO2 but also for efficient management of CO2 injection. Especially, geophysical methods can make in situ observation of CO2 to assess the potential leakage of CO2 and to improve reservoir description as well to monitor development of geologic discontinuity (i.e., fault, crack, joint, etc.). Geophysical monitoring can be based on wireline logging or surface surveys for well-scale monitoring (high resolution and nallow area of investigation) or basin-scale monitoring (low resolution and wide area of investigation). In the meantime, crosswell tomography can make reservoir-scale monitoring to bridge the resolution gap between well logs and surface measurements. This study focuses on reservoir-scale monitoring based on crosswell seismic tomography aiming describe details of reservoir structure and monitoring migration of reservoir fluid (water and CO2). For the monitoring, we first make a sensitivity analysis on crosswell seismic tomography data with respect to CO2 saturation. For the sensitivity analysis, Rock Physics Models (RPMs) are constructed by calculating the values of density and P and S-wave velocities of a virtual CO2 injection reservoir. Since the seismic velocity of the reservoir accordingly changes as CO2 saturation changes when the CO2 saturation is less than about 20%, while when the CO2 saturation is larger than 20%, the seismic velocity is insensitive to the change, sensitivi