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Sample records for time division multiplexed

  1. Performance Analysis of Statistical Time Division Multiplexing Systems

    Directory of Open Access Journals (Sweden)

    Johnson A. AJIBOYE

    2010-12-01

    Full Text Available Multiplexing is a way of accommodating many input sources of a low capacity over a high capacity outgoing channel. Statistical Time Division Multiplexing (STDM is a technique that allows the number of users to be multiplexed over the channel more than the channel can afford. The STDM normally exploits unused time slots by the non-active users and allocates those slots for the active users. Therefore, STDM is appropriate for bursty sources. In this way STDM normally utilizes channel bandwidth better than traditional Time Division Multiplexing (TDM. In this work, the statistical multiplexer is viewed as M/M/1queuing system and the performance is measured by comparing analytical results to simulation results using Matlab. The index used to determine the performance of the statistical multiplexer is the number of packets both in the system and the queue. Comparison of analytical results was also done between M/M/1 and M/M/2 and also between M/M/1 and M/D/1 queue systems. At high utilizations, M/M/2 performs better than M/M/1. M/D/1 also outperforms M/M1.

  2. Demonstration of hybrid orbital angular momentum multiplexing and time-division multiplexing passive optical network.

    Science.gov (United States)

    Wang, Andong; Zhu, Long; Liu, Jun; Du, Cheng; Mo, Qi; Wang, Jian

    2015-11-16

    Mode-division multiplexing passive optical network (MDM-PON) is a promising scheme for next-generation access networks to further increase fiber transmission capacity. In this paper, we demonstrate the proof-of-concept experiment of hybrid mode-division multiplexing (MDM) and time-division multiplexing (TDM) PON architecture by exploiting orbital angular momentum (OAM) modes. Bidirectional transmissions with 2.5-Gbaud 4-level pulse amplitude modulation (PAM-4) downstream and 2-Gbaud on-off keying (OOK) upstream are demonstrated in the experiment. The observed optical signal-to-noise ratio (OSNR) penalties for downstream and upstream transmissions at a bit-error rate (BER) of 2 × 10(-3) are less than 2.0 dB and 3.0 dB, respectively.

  3. A Study of Avionics Time Division Multiplex Bus Simulation.

    Science.gov (United States)

    1980-12-01

    STUDY OF AVIONICS TIME DIVISION MULTIPLEX BUS SIMULATION, For Period Covering ’? *-" . (. I Janu wry k~t-4-31 Decoe 380 tP_: Final Report -, - / -AFOSR...simulation modeling is a type of art work, and therefore requires a talented engineer. Furthermore, the complexity of the sys- tem may be such that it is...used to synchronize the movement of the assembly set. Operand: X field specifies the block number of a MATCH block. Condition for entry acceptance: It

  4. Time-division multiplexing vs network calculus: A comparison

    DEFF Research Database (Denmark)

    Puffitsch, Wolfgang; Sørensen, Rasmus Bo; Schoeberl, Martin

    2015-01-01

    -division multiplexing, where traffic is scheduled according to a precalculated static schedule, and network calculus, a mathematical framework to reason about dynamically scheduled networks. This paper compares the two approaches to provide insight into their relative advantages and disadvantages. The results show...

  5. Time-division-multiplex control scheme for voltage multiplier rectifiers

    Directory of Open Access Journals (Sweden)

    Bin-Han Liu

    2017-03-01

    Full Text Available A voltage multiplier rectifier with a novel time-division-multiplexing (TDM control scheme for high step-up converters is proposed in this study. In the proposed TDM control scheme, two full-wave voltage doubler rectifiers can be combined to realise a voltage quadrupler rectifier. The proposed voltage quadrupler rectifier can reduce transformer turn ratio and transformer size for high step-up converters and also reduce voltage stress for the output capacitors and rectifier diodes. An N-times voltage rectifier can be straightforwardly produced by extending the concepts from the proposed TDM control scheme. A phase-shift full-bridge (PSFB converter is adopted in the primary side of the proposed voltage quadrupler rectifier to construct a PSFB quadrupler converter. Experimental results for the PSFB quadrupler converter demonstrate the performance of the proposed TDM control scheme for voltage quadrupler rectifiers. An 8-times voltage rectifier is simulated to determine the validity of extending the proposed TDM control scheme to realise an N-times voltage rectifier. Experimental and simulation results show that the proposed TDM control scheme has great potential to be used in high step-up converters.

  6. Capacitively-Coupled SQUID Bias for Time Division Multiplexing

    Science.gov (United States)

    Prêle, D.; Voisin, F.; Piat, M.; Martino, J.; Decourcelle, T.; Chapron, C.

    2014-08-01

    The multiplexing scheme presented in this paper is part of the readout chain of the QUBIC instrument devoted to cosmic microwave background polarization observations. It is based on time domain multiplexing using superconducting quantum interference devices (SQUIDs) to read out a large array of superconducting bolometers. The originality of the multiplexer presented here lies in the use of capacitors for the SQUID addressing. Capacitive coupling allows us to bias many SQUIDs in parallel (in a 2D topology), with low crosstalk and low power dissipation of the cryogenic front-end readout. However, capacitors in series with the SQUID require a modification of the addressing strategy. This paper presents a bias reversal technique adopted to sequentially address the SQUIDs through capacitors using a cryogenic SiGe integrated circuit. We further present the different limitations of this technique and how to choose the proper capacitance for a given multiplexing frequency and current source compliance.

  7. Capacity of Wavelength and Time Division Multiplexing for Quasi-Distributed Measurement Using Fiber Bragg Gratings

    Directory of Open Access Journals (Sweden)

    Marcel Fajkus

    2015-01-01

    Full Text Available In this paper, an analysis of the use of wavelength and time division multiplexing techniques for quasi-distributed measurement in uniform fiber Bragg gratings is presented. To date, publications have concentrated on the determination of the maximum number of fiber Bragg gratings on one optical fiber using wavelength and time division multiplexing. In this paper, these techniques will be extended to determine the spectral width of wavelength division multiplexing in terms of the spectral width of the light emitting diode, the spectral width of the Bragg gratings, the measurement ranges of the individual sensors, and the guard band between two adjacent Bragg gratings. For time division multiplexing, a description of the time and power conditions are given. In particular the reflected power, first order crosstalk and chromatic dispersion have been considered. Finally, these relationships were applied to verify a design in a simulation using OptiSystem software.

  8. A Statically Scheduled Time-Division-Multiplexed Network-on-Chip for Real-Time Systems

    DEFF Research Database (Denmark)

    Schoeberl, Martin; Brandner, Florian; Sparsø, Jens

    2012-01-01

    This paper explores the design of a circuit-switched network-on-chip (NoC) based on time-division-multiplexing (TDM) for use in hard real-time systems. Previous work has primarily considered application-specific systems. The work presented here targets general-purpose hardware platforms. We...... presents an FPGA-friendly hardware design, which is simple, fast, and consumes minimal resources. Furthermore, an algorithm to find minimum-period schedules for all-to-all virtual circuits on top of typical physical NoC topologies like 2D-mesh, torus, bidirectional torus, tree, and fat-tree is presented...

  9. A Metaheuristic Scheduler for Time Division Multiplexed Network-on-Chip

    DEFF Research Database (Denmark)

    Sørensen, Rasmus Bo; Sparsø, Jens; Pedersen, Mark Ruvald

    2014-01-01

    This paper presents a metaheuristic scheduler for inter-processor communication in multi-processor platforms using time division multiplexed (TDM) networks on chip (NOC). Compared to previous works, the scheduler handles a broader and more general class of platforms. Another contribution, which has...

  10. Power transients in time-division multiplexed discrete Raman fibre amplifier

    Czech Academy of Sciences Publication Activity Database

    Karásek, Miroslav; Radil, J.; Vojtěch, J.

    2009-01-01

    Roč. 282, č. 14 (2009), s. 2944-2949 ISSN 0030-4018 R&D Projects: GA AV ČR 1ET300670503 Institutional research plan: CEZ:AV0Z20670512 Keywords : optical communications * optical fibre * time division multiplexing Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering Impact factor: 1.316, year: 2009

  11. Argo: A Time-Elastic Time-Division-Multiplexed NOC using Asynchronous Routers

    DEFF Research Database (Denmark)

    Kasapaki, Evangelia; Sparsø, Jens

    2014-01-01

    are either synchronous or mesochronous. We use asynchronous routers to achieve a simpler, smaller, and more robust, self-timed design. Our design exploits the fact that pipelined asynchronous circuits also behave as ripple FIFOs. Thus, it avoids the need for explicit synchronization FIFOs between the routers......In this paper we explore the use of asynchronous routers in a time-division-multiplexed (TDM) network-on-chip (NOC), Argo, that is being developed for a multi-processor platform for hard real-time systems. TDM inherently requires a common time reference, and existing TDM-based NOC designs...... delays derived from a 65nm CMOS implementation, a worstcase analysis shows that a typical design can tolerate a skew of 1-5 cycles (depending on FIFO depths and NI clock frequency). Simulation results of a 2 x 2 NOC confirm this....

  12. Synchronization, retiming and time-division multiplexing of an asynchronous 10 gigabit NRZ Ethernet packet to Terabit Ethernet

    DEFF Research Database (Denmark)

    Hu, Hao; Laguardia Areal, Janaina; Mulvad, Hans Christian Hansen

    2011-01-01

    An asynchronous 10 Gb/s Ethernet packet with maximum packet size of 1518 bytes is synchronized and retimed to a master clock with 200 kHz frequency offset using a time lens. The NRZ packet is simultaneously converted into an RZ packet, then further pulse compressed to a FWHM of 400 fs and finally...... time-division multiplexed with a serial 1.28 Tb/s signal including a vacant time slot, thus forming a 1.29 Tb/s time-division multiplexed serial signal. Error-free performance of synchronizing, retiming, time-division multiplexing to a Terabit data stream and finally demultiplexing back to 10 Gb...

  13. Experimental demonstration of time- and mode-division multiplexed passive optical network

    Science.gov (United States)

    Ren, Fang; Li, Juhao; Tang, Ruizhi; Hu, Tao; Yu, Jinyi; Mo, Qi; He, Yongqi; Chen, Zhangyuan; Li, Zhengbin

    2017-07-01

    A time- and mode-division multiplexed passive optical network (TMDM-PON) architecture is proposed, in which each optical network unit (ONU) communicates with the optical line terminal (OLT) independently utilizing both different time slots and switched optical linearly polarized (LP) spatial modes. Combination of a mode multiplexer/demultiplexer (MUX/DEUX) and a simple N × 1 optical switch is employed to select the specific LP mode in each ONU. A mode-insensitive power splitter is used for signal broadcast/combination between OLT and ONUs. We theoretically propose a dynamic mode and time slot assignment scheme for TMDM-PON based on inter-ONU priority rating, in which the time delay and packet loss ratio's variation tendency are investigated by simulation. Moreover, we experimentally demonstrate 2-mode TMDM-PON transmission over 10 km FMF with 10-Gb/s on-off keying (OOK) signal and direct detection.

  14. Rapid, Time-Division Multiplexed, Direct Absorption- and Wavelength Modulation-Spectroscopy

    Directory of Open Access Journals (Sweden)

    Alexander Klein

    2014-11-01

    Full Text Available We present a tunable diode laser spectrometer with a novel, rapid time multiplexed direct absorption- and wavelength modulation-spectroscopy operation mode. The new technique allows enhancing the precision and dynamic range of a tunable diode laser absorption spectrometer without sacrificing accuracy. The spectroscopic technique combines the benefits of absolute concentration measurements using calibration-free direct tunable diode laser absorption spectroscopy (dTDLAS with the enhanced noise rejection of wavelength modulation spectroscopy (WMS. In this work we demonstrate for the first time a 125 Hz time division multiplexed (TDM-dTDLAS-WMS spectroscopic scheme by alternating the modulation of a DFB-laser between a triangle-ramp (dTDLAS and an additional 20 kHz sinusoidal modulation (WMS. The absolute concentration measurement via the dTDLAS-technique allows one to simultaneously calibrate the normalized 2f/1f-signal of the WMS-technique. A dTDLAS/WMS-spectrometer at 1.37 µm for H2O detection was built for experimental validation of the multiplexing scheme over a concentration range from 50 to 3000 ppmV (0.1 MPa, 293 K. A precision of 190 ppbV was achieved with an absorption length of 12.7 cm and an averaging time of two seconds. Our results show a five-fold improvement in precision over the entire concentration range and a significantly decreased averaging time of the spectrometer.

  15. Rapid, Time-Division Multiplexed, Direct Absorption- and Wavelength Modulation-Spectroscopy

    Science.gov (United States)

    Klein, Alexander; Witzel, Oliver; Ebert, Volker

    2014-01-01

    We present a tunable diode laser spectrometer with a novel, rapid time multiplexed direct absorption- and wavelength modulation-spectroscopy operation mode. The new technique allows enhancing the precision and dynamic range of a tunable diode laser absorption spectrometer without sacrificing accuracy. The spectroscopic technique combines the benefits of absolute concentration measurements using calibration-free direct tunable diode laser absorption spectroscopy (dTDLAS) with the enhanced noise rejection of wavelength modulation spectroscopy (WMS). In this work we demonstrate for the first time a 125 Hz time division multiplexed (TDM-dTDLAS-WMS) spectroscopic scheme by alternating the modulation of a DFB-laser between a triangle-ramp (dTDLAS) and an additional 20 kHz sinusoidal modulation (WMS). The absolute concentration measurement via the dTDLAS-technique allows one to simultaneously calibrate the normalized 2f/1f-signal of the WMS-technique. A dTDLAS/WMS-spectrometer at 1.37 μm for H2O detection was built for experimental validation of the multiplexing scheme over a concentration range from 50 to 3000 ppmV (0.1 MPa, 293 K). A precision of 190 ppbV was achieved with an absorption length of 12.7 cm and an averaging time of two seconds. Our results show a five-fold improvement in precision over the entire concentration range and a significantly decreased averaging time of the spectrometer. PMID:25405508

  16. A Metaheuristic Scheduler for Time Division Multiplexed Network-on-Chip

    DEFF Research Database (Denmark)

    Sørensen, Rasmus Bo; Sparsø, Jens; Pedersen, Mark Ruvald

    This report presents a metaheuristic scheduler for inter-processor communication in multi-core platforms using time division multiplexed (TDM) networks on chip (NOC). Input to the scheduler is a specification of the target multi-core platform and a specification of the application. Compared...... that this is possible with only negligible impact on the schedule period. We evaluate the scheduler with seven different applications from the MCSL NOC benchmark suite. We observe that the metaheuristics perform better than the greedy solution. In the special case of all-to-all communication with equal bandwidths...

  17. Router Designs for an Asynchronous Time-Division-Multiplexed Network-on-Chip

    DEFF Research Database (Denmark)

    Kasapaki, Evangelia; Sparsø, Jens; Sørensen, Rasmus Bo

    2013-01-01

    In this paper we explore the design of an asynchronous router for a time-division-multiplexed (TDM) network-on-chip (NOC) that is being developed for a multi-processor platform for hard real-time systems. TDM inherently requires a common time reference, and existing TDM-based NOC designs are either....... This adds hardware complexity and increases area and power consumption. We propose to use asynchronous routers in order to achieve a simpler, more robust and globally-asynchronous NOC, and this represents an unexplored point in the design space. The paper presents a range of alternative router designs. All...... routers have been synthesized for a 65nm CMOS technology, and the paper reports post-layout figures for area, speed and energy and compares the asynchronous designs with an existing mesochronous clocked router. The results show that an asynchronous router is 2 times smaller, marginally slower...

  18. ONU migration in dynamic Time and Wavelength Division Multiplexed Passive Optical Network (TWDM-PON).

    Science.gov (United States)

    Yang, Hongyang; Sun, Weiqiang; Hu, Weisheng; Li, Jun

    2013-09-09

    We propose a novel Optical Network Units (ONU) migration mechanism within the Time and Wavelength Division Multiplexed PON (TWDM-PON) framework by rearranging the working ONUs to a minimum number of wavelengths and turning off the rest to save power. We show through simulation that the number of working wavelengths can be minimized up to a theoretical lower bound, e.g. 23%, under the typical ONU online profiles. We further investigate how the migration interval and delay influence the user Service Level Agreement (SLA). We find that under the example ONU online profiles, 99.99% ONU SLA can be realized with the migration delay of 1000 milli-seconds. However to realize 99.999% ONU SLA, the migration delay must be 100 milli-seconds or lower.

  19. Survivable architectures for time and wavelength division multiplexed passive optical networks

    Science.gov (United States)

    Wong, Elaine

    2014-08-01

    The increased network reach and customer base of next-generation time and wavelength division multiplexed PON (TWDM-PONs) have necessitated rapid fault detection and subsequent restoration of services to its users. However, direct application of existing solutions for conventional PONs to TWDM-PONs is unsuitable as these schemes rely on the loss of signal (LOS) of upstream transmissions to trigger protection switching. As TWDM-PONs are required to potentially use sleep/doze mode optical network units (ONU), the loss of upstream transmission from a sleeping or dozing ONU could erroneously trigger protection switching. Further, TWDM-PONs require its monitoring modules for fiber/device fault detection to be more sensitive than those typically deployed in conventional PONs. To address the above issues, three survivable architectures that are compliant with TWDM-PON specifications are presented in this work. These architectures combine rapid detection and protection switching against multipoint failure, and most importantly do not rely on upstream transmissions for LOS activation. Survivability analyses as well as evaluations of the additional costs incurred to achieve survivability are performed and compared to the unprotected TWDM-PON. Network parameters that impact the maximum achievable network reach, maximum split ratio, connection availability, fault impact, and the incremental reliability costs for each proposed survivable architecture are highlighted.

  20. Advanced time and wavelength division multiplexing for metropolitan area optical data communication networks

    Science.gov (United States)

    Watford, M.; DeCusatis, C.

    2005-09-01

    With the advent of new regulations governing the protection and recovery of sensitive business data, including the Sarbanes-Oxley Act, there has been a renewed interest in business continuity and disaster recovery applications for metropolitan area networks. Specifically, there has been a need for more efficient bandwidth utilization and lower cost per channel to facilitate mirroring of multi-terabit data bases. These applications have further blurred the boundary between metropolitan and wide area networks, with synchronous disaster recovery applications running up to 100 km and asynchronous solutions extending to 300 km or more. In this paper, we discuss recent enhancements in the Nortel Optical Metro 5200 Dense Wavelength Division Multiplexing (DWDM) platform, including features recently qualified for data communication applications such as Metro Mirror, Global Mirror, and Geographically Distributed Parallel Sysplex (GDPS). Using a 10 Gigabit/second (Gbit/s) backbone, this solution transports significantly more Fibre Channel protocol traffic with up to five times greater hardware density in the same physical package. This is also among the first platforms to utilize forward error correction (FEC) on the aggregate signals to improve bit error rate (BER) performance beyond industry standards. When combined with encapsulation into wide area network protocols, the use of FEC can compensate for impairments in BER across a service provider infrastructure without impacting application level performance. Design and implementation of these features will be discussed, including results from experimental test beds which validate these solutions for a number of applications. Future extensions of this environment will also be considered, including ways to provide configurable bandwidth on demand, mitigate Fibre Channel buffer credit management issues, and support for other GDPS protocols.

  1. Optical Synchronization of a 10-G Ethernet Packet and Time-Division Multiplexing to a 50-Gb/s Signal Using an Optical Time Lens

    DEFF Research Database (Denmark)

    Hu, Hao; Laguardia Areal, Janaina; Palushani, Evarist

    2010-01-01

    A 10-G Ethernet packet with maximum packet size of 1518 bytes is synchronized to a master clock with 200-kHz frequency offset using a time lens. The input 10-Gb/s non-return-to-zero packet is at the same time converted into a return-to-zero (RZ) packet with a pulsewidth of 10 ps and then time......-division multiplexed with four 10-Gb/s optical time-division-multiplexing (OTDM) channels, thus constituting a 50-Gb/s OTDM serial signal. Error-free performances of the synchronized RZ packet and demultiplexed packet from the aggregated 50-Gb/s OTDM signal are achieved....

  2. Time-division multiplexing for myoelectric closed-loop control using electrotactile feedback.

    Science.gov (United States)

    Dosen, Strahinja; Schaeffer, Marie-Caroline; Farina, Dario

    2014-09-15

    Restoring sensory feedback in myoelectric prostheses is still an open challenge. Closing the loop might lead to a more effective utilization and better integration of these systems into the body scheme of the user. Electrotactile stimulation can be employed to transmit the feedback information to the user, but it represents a strong interference to the recording of the myoelectric signals that are used for control. Time-division multiplexing (TDM) can be applied to avoid this interference by performing the stimulation and recording in dedicated, non-overlapping time windows. A closed-loop compensatory tracking task with myocontrol and electrotactile stimulation was used to investigate how the duration of the feedback window (FW) influences the ability to perceive the feedback information and react with an appropriate control action. Nine subjects performed eight trials with continuous recording and contralateral feedback (CONT-CLT) and TDM with ispilateral stimulation and recording using the FW of 40 ms (TDM40), 100 ms (TDM100) and 300 ms (TDM300). The tracking quality was evaluated by comparing the reference and generated trajectories using cross-correlation coefficient (CCCOEF), time delay, root mean square tracking error, and the amount of overshoot. The control performance in CONT-CLT was the best in all the outcome measures. The overall worst performance was obtained using TDM with the shortest FW (TDM40). There was no significant difference between TDM100 and TDM300, and the quality of tracking in these two conditions was high (CCCOEF ~ 0.95). The results demonstrated that FW duration is indeed an important parameter in TDM, which appears to have an optimal value. Among the tested cases, the FW duration of 100 ms seems to be the best trade-off between the quality of perception and a limited command update rate. This study represents the first systematic evaluation of a TDM-based approach for closing the loop using electrotactile feedback in myoelectric

  3. A large capacity time division multiplexed (TDM) laser beam combining technique enabled by nanosecond speed KTN deflector

    Science.gov (United States)

    Yin, Stuart (Shizhuo); Chao, Ju-Hung; Zhu, Wenbin; Chen, Chang-Jiang; Campbell, Adrian; Henry, Michael; Dubinskiy, Mark; Hoffman, Robert C.

    2017-08-01

    In this paper, we present a novel large capacity (a 1000+ channel) time division multiplexing (TDM) laser beam combining technique by harnessing a state-of-the-art nanosecond speed potassium tantalate niobate (KTN) electro-optic (EO) beam deflector as the time division multiplexer. The major advantages of TDM approach are: (1) large multiplexing capability (over 1000 channels), (2) high spatial beam quality (the combined beam has the same spatial profile as the individual beam), (3) high spectral beam quality (the combined beam has the same spectral width as the individual beam, and (4) insensitive to the phase fluctuation of individual laser because of the nature of the incoherent beam combining. The quantitative analyses show that it is possible to achieve over one hundred kW average power, single aperture, single transverse mode solid state and/or fiber laser by pursuing this innovative beam combining method, which represents a major technical advance in the field of high energy lasers. Such kind of 100+ kW average power diffraction limited beam quality lasers can play an important role in a variety of applications such as laser directed energy weapons (DEW) and large-capacity high-speed laser manufacturing, including cutting, welding, and printing.

  4. An Asynchronous Time-Division-Multiplexed Network-on-Chip for Real-Time Systems

    DEFF Research Database (Denmark)

    Kasapaki, Evangelia

    applied at its endpoints, the NIs. Overall this thesis presents the design and implementation of Argo, and the analysis of its elastic behavior. It shows that Argo provides hard real-time guarantees in a straightforward way, it has an efficient implementation and it is time-elastic....... the elasticity and its limits. A quantitative analysis models the Argo behavior using timed-graph models and worstcase timing separation of events analysis to evaluate the elasticity of Argo. The results show that the skew absorbed by the network of routers can be two or more cycles, depending on the frequency......Multi-processor architectures using networks-on-chip (NOCs) for communication are becoming the standard approach in the development of embedded systems and general purpose platforms. Typically, multi-processor platforms follow a globally asynchronous locally synchronous (GALS) timing organization...

  5. Time-Predictable Communication on a Time-Division Multiplexing Network-on-Chip Multicore

    DEFF Research Database (Denmark)

    Sørensen, Rasmus Bo

    of the Argo NoC network interface (NI) that supports instantaneous reconfiguration, a TDM traffic scheduler that generates virtual circuit (VC) configurations for the Argo NoC, and software functions for two types of intercore communication. The new generation of the Argo NoC adds the capability...... of instantaneously reconfiguring VCs and it addresses the identified shortcomings of the previous generation. The VCs provide the guaranteed bandwidth and latency required to implement time-predictable inter-core communication on top of the Argo NoC. This new Argo generation is, in terms of hardware, less than half...

  6. On-chip mode division multiplexing technologies

    DEFF Research Database (Denmark)

    Ding, Yunhong; Frellsen, Louise Floor; Guan, Xiaowei

    2016-01-01

    Space division multiplexing (SDM) is currently widely investigated in order to provide enhanced capacity thanks to the utilization of space as a new degree of multiplexing freedom in both optical fiber communication and on-chip interconnects. Basic components allowing the processing of spatial...... using one-dimensional (1D) photonic crystal silicon waveguides. We furthermore use the fabricated devices to demonstrate on-chip point-to-point mode division multiplexing transmission, and all-optical signal processing by mode-selective wavelength conversion. Finally, we report an efficient silicon...

  7. High sensitivity measurement of NO, NO2 and NH3 using MIR-QCL and time division multiplexing WMS technology

    Science.gov (United States)

    Chen, Xiang; Yang, Chenguang; Hu, Mai; Xu, Zhenyu; Fan, Xueli; Wei, Min; Yao, Lu; He, Yabai; Kan, Ruifeng

    2016-10-01

    A compact system based on mid-infrared quantum cascade laser (QCL) operated in room temperature was developed for the simultaneous monitoring of NO, NO2 and NH3 in the air. Laser beams of three QCLs with central wavelength located at 1900 cm-1, 1600 cm-1, 1103.4 cm-1 were coupled to pass through the 60m long gas cell together. With the technology of time division multiplexing, wavelength modulation spectroscopy (WMS) signals of three lasers can be detected at adjacent scan process. The real-time second harmonic analysis was implemented to achieve simultaneous detection of NO, NO2 and NH3. A minimum detection limit (MDL) of 0.2ppb for NO, 0.12ppb for NO2 and 0.1ppb for NH3 with an optimum integration time around 100 seconds can be achieved for this setup. An ambient monitoring of three gasses during 5 hours was performed to inspect the local air quality.

  8. Performance of Coarse Timing Synchronization in Orthogonal Frequency Division Multiplexing System

    Science.gov (United States)

    Bruno; Xuping, Zhai

    2018-01-01

    A novel symbol timing synchronization based on training symbols for OFDM system was designed and presented in this paper. The performance of the proposed method is tested in terms of the timing metric and mean square error (MSE), indoor no-noise, and Rayleigh fading channel, obtained by simulation. The over the air transmission of the proposed timing metric is evaluated by implementing a software defined radio based on the GNU Radio and universal software radio peripheral communication platforms. The simulation results show that the proposed timing metric indexed at the correct time point, which has smaller MSE than others methods, particularly at high signal-to-noise ratio. Therefore the proposed method works well, even in transmission through the air indoor laboratory environment.

  9. A Comparison and Outline of Tolerances in Performing Optical Time Division Multiplexing using Electro-Absorption Modulators

    Science.gov (United States)

    Owsiak, Mark

    As high bandwidth applications continue to emerge, investigation in technologies that will increase transmission capacity become necessary. Of these technologies, Optical Time Division Multiplexing (OTDM) has been presented as a possible solution, supporting a next generation bit rate of 160 Gbit/s. To perform the demultiplexing task, the use of tandem electro-absorption modulators (EAMs) has been widely studied, and due to its benefits was chosen as the topology of this thesis. To create an effective model of an OTDM system, the vector based mathematical simulation tool MatLab is used. Care was taken to create an accurate representation of an OTDM system, including: the development of a realistic pulse shape, the development of a true pseudo-random bit sequence in all transmitted channels, the optimization of the gating function, and the representation of system penalty. While posing impressive bit rates, various sources of system performance degradation pose issues in an OTDM system, owning to its ultra-narrow pulse widths. The presence of dispersion, timing jitter, polarization mode dispersion, and nonlinear effects, can sufficiently degrade the quality of the received data. This thesis gives a clear guideline to the tolerance an OTDM system exhibits to each of the aforementioned sources of system penalty. The theory behind each impairment is thoroughly discussed and simulated using MatLab. From the simulated results, a finite degree of sensitivity to each source of system penalty is realized. These contributions are of particular importance when attempting to implement an OTDM system in either the laboratory, or the field.

  10. Intracavity absorption multiplexed sensor network based on dense wavelength division multiplexing filter.

    Science.gov (United States)

    Zhang, Haiwei; Lu, Ying; Duan, Liangcheng; Zhao, Zhiqiang; Shi, Wei; Yao, Jianquan

    2014-10-06

    We report the system design and experimental verification of an intracavity absorption multiplexed sensor network with hollow core photonic crystal fiber (HCPCF) sensors and dense wavelength division multiplexing (DWDM) filters. Compared with fiber Bragg grating (FBG), it is easier for the DWDM to accomplish a stable output. We realize the concentration detection of three gas cells filled with acetylene. The sensitivity is up to 100 ppmV at 1536.71 nm. Voltage gradient is firstly used to optimize the intracavity sensor network enhancing the detection efficiency up to 6.5 times. To the best of our knowledge, DWDM is firstly used as a wavelength division multiplexing device to realize intracavity absorption multiplexed sensor network. It make it possible to realize high capacity intracavity sensor network via multiplexed technique.

  11. Interfacing Hardware Accelerators to a Time-Division Multiplexing Network-on-Chip

    DEFF Research Database (Denmark)

    Pezzarossa, Luca; Sørensen, Rasmus Bo; Schoeberl, Martin

    2015-01-01

    for receiving results. This allows a stateless and possibly pipelined hardware accelerator to be shared in an interleaved fashion without any form of reservation, and this opens for interesting area-performance trade-offs. The design is developed with a focus on time-predictability, areaefficiency, and FPGA...... in the platform. Our design takes a different approach and connects the hardware accelerators to the network-on-chip in the same way as processor cores. Each processor that uses a hardware accelerator is assigned a virtual channel for sending instructions to the hardware accelerator and a virtual channel...... implementation. The design evaluation is carried out using the open source T-CREST multi-core platform implemented on an Altera Cyclone IV FPGA. The size of the proposed design, including a floating-point accelerator, is about two-thirds of a processor....

  12. Ultra-thin silicon (UTSi) on insulator CMOS transceiver and time-division multiplexed switch chips for smart pixel integration

    Science.gov (United States)

    Zhang, Liping; Sawchuk, Alexander A.

    2001-12-01

    We describe the design, fabrication and functionality of two different 0.5 micron CMOS optoelectronic integrated circuit (OEIC) chips based on the Peregrine Semiconductor Ultra-Thin Silicon on insulator technology. The Peregrine UTSi silicon- on-sapphire (SOS) technology is a member of the silicon-on- insulator (SOI) family. The low-loss synthetic sapphire substrate is optically transparent and has good thermal conductivity and coefficient of thermal expansion properties, which meet the requirements for flip-chip bonding of VCSELs and other optoelectronic input-output components. One chip contains transceiver and network components, including four channel high-speed CMOS transceiver modules, pseudo-random bit stream (PRBS) generators, a voltage controlled oscillator (VCO) and other test circuits. The transceiver chips can operate in both self-testing mode and networking mode. An on- chip clock and true-single-phase-clock (TSPC) D-flip-flop have been designed to generate a PRBS at over 2.5 Gb/s for the high-speed transceiver arrays to operate in self-testing mode. In the networking mode, an even number of transceiver chips forms a ring network through free-space or fiber ribbon interconnections. The second chip contains four channel optical time-division multiplex (TDM) switches, optical transceiver arrays, an active pixel detector and additional test devices. The eventual applications of these chips will require monolithic OEICs with integrated optical input and output. After fabrication and testing, the CMOS transceiver array dies will be packaged with 850 nm vertical cavity surface emitting lasers (VCSELs), and metal-semiconductor- metal (MSM) or GaAs p-i-n detector die arrays to achieve high- speed optical interconnections. The hybrid technique could be either wire bonding or flip-chip bonding of the CMOS SOS smart-pixel arrays with arrays of VCSELs and photodetectors onto an optoelectronic chip carrier as a multi-chip module (MCM).

  13. Robust and Flexible Wavelength Division Multiplexed Optical Access Networks

    DEFF Research Database (Denmark)

    Wagner, Christoph; Eiselt, Michael; Grobe, Klaus

    Future wavelength division multiplexed (WDM) access networks should be as flexible as possible. One flexibility is port wavelength-agnosticism at the optical network unit (ONU) interface, achieved via tunable laser. At the same time such systems needs to be robust against crosstalk impairments...

  14. Silicon Chip-to-Chip Mode-Division Multiplexing

    DEFF Research Database (Denmark)

    Baumann, Jan Markus; Porto da Silva, Edson; Ding, Yunhong

    2018-01-01

    A chip-to-chip mode-division multiplexing connection is demonstrated using a pair of multiplexers/demultiplexers fabricated on the silicon-on-insulator platform. Successful mode multiplexing and demultiplexing is experimentally demonstrated, using the LP01, LP11a and LP11b modes.......A chip-to-chip mode-division multiplexing connection is demonstrated using a pair of multiplexers/demultiplexers fabricated on the silicon-on-insulator platform. Successful mode multiplexing and demultiplexing is experimentally demonstrated, using the LP01, LP11a and LP11b modes....

  15. Wavelength division multiplexing a practical engineering guide

    CERN Document Server

    Grobe, Klaus

    2013-01-01

    In this book, Optical Wavelength Division Multiplexing (WDM) is approached from a strictly practical and application-oriented point of view. Based on the characteristics and constraints of modern fiber-optic components, transport systems and fibers, the text provides relevant rules of thumb and practical hints for technology selection, WDM system and link dimensioning, and also for network-related aspects such as wavelength assignment and resilience mechanisms. Actual 10/40 Gb/s WDM systems are considered, and a preview of the upcoming 100 Gb/s systems and technologies for even higher bit rate

  16. Hybrid time-frequency domain equalization based on sign-sign joint decision multimodulus algorithm for 6 × 6 mode division multiplexing system

    Science.gov (United States)

    Li, Jiao; Hu, Guijun; Gong, Caili; Li, Li

    2018-02-01

    In this paper, we propose a hybrid time-frequency domain sign-sign joint decision multimodulus algorithm (Hybrid-SJDMMA) for mode-demultiplexing in a 6 × 6 mode division multiplexing (MDM) system with high-order QAM modulation. The equalization performance of Hybrid-SJDMMA was evaluated and compared with the frequency domain multimodulus algorithm (FD-MMA) and the hybrid time-frequency domain sign-sign multimodulus algorithm (Hybrid-SMMA). Simulation results revealed that Hybrid-SJDMMA exhibits a significantly lower computational complexity than FD-MMA, and its convergence speed is similar to that of FD-MMA. Additionally, the bit-error-rate performance of Hybrid-SJDMMA was obviously better than FD-MMA and Hybrid-SMMA for 16 QAM and 64 QAM.

  17. Multi-input multioutput orthogonal frequency division multiplexing radar waveform design for improving the detection performance of space-time adaptive processing

    Science.gov (United States)

    Wang, Hongyan

    2017-04-01

    This paper addresses the waveform optimization problem for improving the detection performance of multi-input multioutput (MIMO) orthogonal frequency division multiplexing (OFDM) radar-based space-time adaptive processing (STAP) in the complex environment. By maximizing the output signal-to-interference-and-noise-ratio (SINR) criterion, the waveform optimization problem for improving the detection performance of STAP, which is subjected to the constant modulus constraint, is derived. To tackle the resultant nonlinear and complicated optimization issue, a diagonal loading-based method is proposed to reformulate the issue as a semidefinite programming one; thereby, this problem can be solved very efficiently. In what follows, the optimized waveform can be obtained to maximize the output SINR of MIMO-OFDM such that the detection performance of STAP can be improved. The simulation results show that the proposed method can improve the output SINR detection performance considerably as compared with that of uncorrelated waveforms and the existing MIMO-based STAP method.

  18. Transmission of 20 channels over 238 km of non-zero dispersion shifted fibre using distributed time-division multiplexing-pumped Raman amplification

    Czech Academy of Sciences Publication Activity Database

    Karásek, Miroslav; Radil, J.; Vojtěch, J.

    2010-01-01

    Roč. 4, č. 2 (2010), s. 78-84 ISSN 1751-8768 R&D Projects: GA AV ČR 1ET300670503 Institutional research plan: CEZ:AV0Z20670512 Keywords : optical fibre amplifiers * Raman amplification * wavelength – division - multiplexing Subject RIV: JA - Electronics ; Optoelectronics , Electrical Engineering Impact factor: 1.105, year: 2010

  19. Four-fold increase in users of time-wavelength division multiplexing (TWDM) passive optical network (PON) by delayed optical amplitude modulation (AM) upstream

    Science.gov (United States)

    Kachhatiya, Vivek; Prince, Shanthi

    2016-12-01

    In this paper, we have proposed and simulated optical time division multiplexed passive optical network (TDM-PON) using delayed optical amplitude modulation (AM). Eight upstream wavelengths are demonstrated to show optical time wavelength division multiplexed (TWDM) by combining optical network units (ONU) users data at the remote node (RN). Each ONU generates 2.5 Gb/s user data, and it is modulated using novel return to zero (RZ) delayed AM. Optical TDM aggregates 10 Gb/s data per wavelength from four 2.5 Gb/s upstream user data, which facilitates four different ONU data on the same wavelength as 10 Gb/s per upstream wavelength and, simplify the laser requirements (2.5 Gb/s) at each optical network unit (ONU) transmitter. Upstream optical TWDM-PON is investigated for eight wavelengths with wavelength spacing of 100 GHz. Novel optical TDM for upstream increased the number of the simultaneous user to fourfold from conventional TWDM-PON using delayed AM with a high-quality-factor of received signal. Despite performance degradation due to different fiber reach and dispersion compensation technique, Optical TWDM link shows significant improvement regarding receiver sensitivity when compared with common TWDM link. Hence, it offers optimistic thinking to show optical TDM at this phase as one of the future direction, where complex digital signal processing (DSP) and coherent optical communication are frequently demonstrated to serve the access network. Downstream side conventional TWDM eight wavelengths are multiplexed at the OLT and sent downstream to serve distributed tunable ONU receivers through an optical distribution network (ODN). Each downstream wavelengths are modulated at the peak rate of 10 Gb/s using non-return to zero external modulation (NRZ-EM). The proposed architecture is cost efficient and supports high data rates as well as ;pay as you grow; network for both service providers and the users perspectives. Users are classified into two categories viz home

  20. Recent Progress in Space-Division Multiplexed Transmission Technologies

    DEFF Research Database (Denmark)

    Morioka, Toshio

    2013-01-01

    Recent development of transmission technologies based on space-division multiplexing is described with future perspectives including a recent achievement of one Pb/s transmission in a single strand of fiber.......Recent development of transmission technologies based on space-division multiplexing is described with future perspectives including a recent achievement of one Pb/s transmission in a single strand of fiber....

  1. Signal processing for on-chip space division multiplexing

    DEFF Research Database (Denmark)

    Peucheret, Christophe; Ding, Yunhong; Xu, Jing

    2015-01-01

    Our recent results on the demonstration of on-chip mode-division multiplexing are reviewed, with special emphasis on nonlinear all-optical signal processing. Mode-selective parametric processes are demonstrated in a silicon-on-insulator waveguide.......Our recent results on the demonstration of on-chip mode-division multiplexing are reviewed, with special emphasis on nonlinear all-optical signal processing. Mode-selective parametric processes are demonstrated in a silicon-on-insulator waveguide....

  2. In-service communication channel sensing based on reflectometry for dynamic wavelength assigned wavelength- and time-division multiplexed passive optical network systems

    Science.gov (United States)

    Iida, Daisuke; Kuwano, Shigeru; Terada, Jun

    2015-04-01

    In future radio access systems, base stations will be mainly accommodated in wavelength- and time-division multiplexing passive optical network (PON) based mobile backhaul and fronthaul networks, and in such networks, failed connections in an optical network unit (ONU) wavelength channel will severely degrade mobile system performance. A cost-effective in-service ONU wavelength channel monitor is essential to ensure proper system operation without failed connections. To address this issue, we propose a reflectometry-based remote sensing method that provides ONU wavelength channel information with the optical line terminal-ONU distance. The proposed method enables real-time monitoring of ONU wavelength channels without data signal quality degradation and is also able to determine if the ONUs are connected to the PON. Experimental results show that it achieves wavelength channel distinction with a high distance resolution (˜10 m). Additionally, with the method, the distance resolution for distinguishing the ONUs after the PON splitter is determined by the received signal bandwidth or the test light modulation speed rather than by the pulse width as in conventional optical time-domain reflectometry.

  3. Optical Time-Division Multiplexing of 10 Gbit/s Ethernet Signals Synchronized by All-Optical Signal Processing Based on a Time-Lens

    DEFF Research Database (Denmark)

    Areal, Janaina Laguardia

    This Thesis presents 3 years work of an optical circuit that performs both pulse compression and frame synchronization and retiming. Our design aims at directly multiplexing several 10G Ethernet data packets (frames) to a high-speed OTDM link. This scheme is optically transparent and does...... pulse compression, as well. The overall design is: (1) Pulses are converted from NRZ to RZ; (2) pulses are synchronized, retimed and further compressed at the specially designed time-lens; and (3) with adequate optical delays, frames from different input interfaces are added, with a simple optical...

  4. Topology Optimized Components for Mode- and Wavelength Division Multiplexing

    DEFF Research Database (Denmark)

    Frellsen, Louise Floor

    through simulations and experiments. Among these are converters and (de-)multiplexers for mode division multiplexing, both realized with a record small footprint. Wavelength multiplexing devices were used as a basis for investigating the correlation between structure sizes and performance. Fortunately......This thesis deals with the topic of passive integrated nanophotonic devices realized in silicon on insulator material. The project has been concerned with all the steps of the process: Design, fabrication and characterization. The focus has been on using the inverse design method topology...

  5. A SURVEY ON WAVELENGTH DIVISION MULTIPLEXING (WDM NETWORKS

    Directory of Open Access Journals (Sweden)

    G. Ramesh

    2010-03-01

    Full Text Available Communication networks have emerged as a source of empowerment in today’s society. At the global level, the Internet is becoming the backbone of the modern economy. The new generations in developed countries cannot even conceive of a world without broadband access to the Internet. The inability of the current Internet infrastructure to cope with the wide variety and ever growing number of users, emerging networked applications, usage patterns and business models is increasingly being recognized worldwide. The dynamic growth of Internet traffic and its bursty nature requires high transmission rate. With the advances and the progress in Wavelength Division Multiplexing (WDM technology, the amount of raw bandwidth available in fiber links has increased to high magnitude. This paper presents a survey on WDM networks from its development to the current status. Also an analysis on buffer size in optical networks for real time traffic was performed.

  6. Particle image velocimetry based on wavelength division multiplexing

    Science.gov (United States)

    Tang, Chunxiao; Li, Enbang; Li, Hongqiang

    2018-01-01

    This paper introduces a technical approach of wavelength division multiplexing (WDM) based particle image velocimetry (PIV). It is designed to measure transient flows with different scales of velocity by capturing multiple particle images in one exposure. These images are separated by different wavelengths, and thus the pulse separation time is not influenced by the frame rate of the camera. A triple-pulsed PIV system has been created in order to prove the feasibility of WDM-PIV. This is demonstrated in a sieve plate extraction column model by simultaneously measuring the fast flow in the downcomer and the slow vortices inside the plates. A simple displacement/velocity field combination method has also been developed. The constraints imposed by WDM-PIV are limited wavelength choices of available light sources and cameras. The usage of WDM technique represents a feasible way to realize multiple-pulsed PIV.

  7. Orthogonal frequency division multiplexing with diversity for future wireless systems

    CERN Document Server

    Le, Khoa N

    2012-01-01

    The book examines several aspects of Orthogonal Frequency Division Multiplexing (OFDM) employing linear diversity techniques such as inter-carrier interference, bit error rate, peak to average power and inter-block interference. It should be a useful reference for readers interested in modern wireless communication systems.

  8. Novel equalization techniques for space division multiplexing based on stokes space update rule

    DEFF Research Database (Denmark)

    Caballero, Francisco Javier Vaquero; Pittalà, Fabio; Goeger, Gernot

    2017-01-01

    Space division multiplexing (SDM) is a promising technology that aims to overcome the capacity crunch of optical communications. In this paper, we introduce the multiple-input multiple-output (MIMO) Stokes Space Algorithm (SSA) implemented in frequency domain, a novel equalization technique...... for space division multiplexing (SDM). Although different papers have been published about the SSA and its MIMO implementation, we provide for the first time an analysis of the of the convergence speed and frequency offset of the SSA compared to the least mean square (LMS). SSA algorithm can deal...... longer training sequences than LMS....

  9. Simulation Performance of Multiple-Input Multiple-Output Systems Employing Single-Carrier Modulation and Orthogonal Frequency Division Multiplexing

    National Research Council Canada - National Science Library

    Saglam, Halil D

    2004-01-01

    ...) systems utilizing Alamouti-based space-time block coding (STBC) technique. The MIMO communication systems using STBC technique employing both single-carrier modulation and orthogonal frequency division multiplexing (OFDM...

  10. Division Multiplexing of 10 Gbit/s Ethernet Signals Synchronized by All-Optical Signal Processing Based on a Time-Lens

    DEFF Research Database (Denmark)

    Areal, Janaina Laguardia

    This Thesis presents 3 years work of an optical circuit that performs both pulse compression and frame synchronization and retiming. Our design aims at directly multiplexing several 10G Ethernet data packets (frames) to a high-speed OTDM link. This scheme is optically trans-parent and does...... pulse compression, as well. The over-all design is: (1) Pulses are converted from NRZ to RZ; (2) pulses are synchronized, retimed and further compressed at the specially de-signed time-lens; and (3) with adequate optical delays, frames from different input interfaces are added, with a simple optical...

  11. 2x2 MIMO-OFDM Gigabit fiber-wireless access system based on polarization division multiplexed WDM-PON

    DEFF Research Database (Denmark)

    Deng, Lei; Pang, Xiaodan; Zhao, Ying

    2012-01-01

    We propose a spectral efficient radio over wavelength division multiplexed passive optical network (WDM-PON) system by combining optical polarization division multiplexing (PDM) and wireless multiple input multiple output (MIMO) spatial multiplexing techniques. In our experiment, a training...

  12. Optical Code-Division Multiple-Access and Wavelength Division Multiplexing: Hybrid Scheme Review

    OpenAIRE

    P. Susthitha Menon; Sahbudin Shaari; Isaac A.M. Ashour; Hesham A. Bakarman

    2012-01-01

    Problem statement: Hybrid Optical Code-Division Multiple-Access (OCDMA) and Wavelength-Division Multiplexing (WDM) have flourished as successful schemes for expanding the transmission capacity as well as enhancing the security for OCDMA. However, a comprehensive review related to this hybrid system are lacking currently. Approach: The purpose of this paper is to review the literature on OCDMA-WDM overlay systems, including our hybrid approach of one-dimensional coding of SAC OCDMA with WDM si...

  13. Security risk assessment of the primary layer of wavelength division multiplexing passive optical network

    Science.gov (United States)

    Koudelka, Petr; Siska, Petr; Latal, Jan; Poboril, Radek; Hajek, Lukas; Kepak, Stanislav; Vasinek, Vladimir

    2015-01-01

    Next-generation passive optical access networks come to the fore nowadays. These optical next-generation networks are the response to the increasing qualitative requirements from end users. Technologies using Time Division Multiplexing include NG-PON (XG-PON 1 and XG-PON 2) and 10GEPON. Their advantage is the applicability to older topologies, which are operated by the original technology of passive optical access networks. Wavelength Division Multiplexing Passive Optical Network (WDM-PON) is an alternative also belonging to next-generation networks. Time Division Multiplexing is in this case replaced by Wavelength Division Multiplexing. Certain variants of WDM-PON use a combination of broadband light source, optical circulator, optical phased array and tunable FP laser. Construction of the terminal units (ONU) is advantageous because it can always tune in to the appropriate wavelength in the given optical DWDM channel (100 GHz). The disadvantage is the increased security risk on the primary layer due to channel crosstalk in an optical phased array (AWG). The aim of this paper is to assess the degree of security risk in real conditions. The article includes both simulation and real measurements in C + L bands with 100 GHz DWDM spacing.

  14. Coherent ultra dense wavelength division multiplexing passive optical networks

    Science.gov (United States)

    Shahpari, Ali; Ferreira, Ricardo; Ribeiro, Vitor; Sousa, Artur; Ziaie, Somayeh; Tavares, Ana; Vujicic, Zoran; Guiomar, Fernando P.; Reis, Jacklyn D.; Pinto, Armando N.; Teixeira, António

    2015-12-01

    In this paper, we firstly review the progress in ultra-dense wavelength division multiplexing passive optical network (UDWDM-PON), by making use of the key attributes of this technology in the context of optical access and metro networks. Besides the inherit properties of coherent technology, we explore different modulation formats and pulse shaping. The performance is experimentally demonstrated through a 12 × 10 Gb/s bidirectional UDWDM-PON over hybrid 80 km standard single mode fiber (SSMF) and optical wireless link. High density, 6.25 GHz grid, Nyquist shaped 16-ary quadrature amplitude modulation (16QAM) and digital frequency shifting are some of the properties exploited together in the tests. Also, bidirectional transmission in fiber, relevant in the context, is analyzed in terms of nonlinear and back-reflection effects on receiver sensitivity. In addition, as a basis for the discussion on market readiness, we experimentally demonstrate real-time detection of a Nyquist-shaped quaternary phase-shift keying (QPSK) signal using simple 8-bit digital signal processing (DSP) on a field-programmable gate array (FPGA).

  15. Silicon mode multiplexer processing dual-path mode-division multiplexing signals.

    Science.gov (United States)

    Sun, Chunlei; Yu, Yu; Chen, Guanyu; Zhang, Xinliang

    2016-12-01

    Great strides have been made in the optical interconnect for a mode-division multiplexing (MDM) system. The mode multiplexer/demultiplexer (MUX/DEMUX) is the crucial component for the MDM system. We propose and demonstrate a scheme that is different from the reported multiplexing schemes, mode MUX that tackles dual-path MDM signals simultaneously and avoids mode conflict. The performance is experimentally demonstrated by integrating the proposed MUX and DEMUX into a MDM link, with ∼1  dB of insertion loss and ∼18  dB extinction ratio over the C-band. Single-wavelength, non-return-to-zero on-off keying signals at 10 Gb/s carried on dual-path different modes are successfully processed with open and clear eye diagrams, and <1  dB power penalty are obtained.

  16. Space division multiplexing chip-to-chip quantum key distribution

    DEFF Research Database (Denmark)

    Bacco, Davide; Ding, Yunhong; Dalgaard, Kjeld

    2017-01-01

    nodes of the quantum keys to their respective destinations. In this paper we present an experimental demonstration of a photonic integrated silicon chip quantum key distribution protocols based on space division multiplexing (SDM), through multicore fiber technology. Parallel and independent quantum......Quantum cryptography is set to become a key technology for future secure communications. However, to get maximum benefit in communication networks, transmission links will need to be shared among several quantum keys for several independent users. Such links will enable switching in quantum network...... keys are obtained, which are useful in crypto-systems and future quantum network....

  17. All-Optical Regeneration System for Optical Wavelength Division Multiplexed Communication Systems

    DEFF Research Database (Denmark)

    2014-01-01

    The invention relates to an all-optical regeneration system for regeneration of optical wavelength division multiplexed WDM data signals in an optical WDM communication system. The system comprises a WDM-to-Optical time domain multiplexing OTDM, WDM-to-OTDM, converter, capable of converting....... The system additionally comprises an OTDM-to-WDM converter for converting the output OTDM data signal to an output WDM data signal. An input of the all-optical regenerator unit is in optical communication with an output of the WDM-to-OTDM converter, and an output of the all-optical regenerator unit...... an input WDM data signal comprising multiple wavelength channels into an input OTDM data signal comprising multiple time multiplexed time channels. The system further comprises an all-optical regenerator unit being configured for regenerating the input OTDM data signal into an output OTDM data signal...

  18. Space division multiplexing optical communication using few-mode fibers

    Science.gov (United States)

    Weng, Yi; He, Xuan; Pan, Zhongqi

    2017-07-01

    To realize ultra-high capacity long-haul transmission, space-division multiplexing (SDM) has emerged as a promising solution, in which each data channel is modulated into an individual spatial/polarization modes in few-mode fibers (FMF) to increase the overall number of parallel channels. In this paper, we review the latest advances in SDM technology on the FMF, component, digital signal processing (DSP), as well as transmission demonstrations. First, we introduce the FMF characteristics, fabrication and manufacturing issues including modal dispersion, mode coupling, and nonlinearities. We next discuss in detail several key SDM components such as spatial multiplexers/demultiplexers (MUX/DeMUX), optical amplifiers, mode converters and SDM reconfigurable optical add-drop multiplexer (ROADM). Accordingly, we explore the DSP algorithms for SDM systems, covering least mean squares (LMS), recursive least squares (RLS), hardware complexity analysis, and mode dependent effects. Besides, a number of recent experimental validations are evaluated enabling higher transmission capacity for short, medium and long distances.

  19. Real-time polarization mode dispersion monitoring system for a multiple-erbium-doped fiber amplifier, dense wavelength division multiplexing optical fiber transmission by amplified spontaneous emission modulation and acousto-optic tunable fiber scanning techniques.

    Science.gov (United States)

    Tseng, Bao-Jang; Tarn, Chen-Wen

    2009-03-01

    Without interruption or affecting the transmission of ordinary payload channels, we propose a real time polarization mode dispersion (PMD) monitoring system for long-haul, multiple erbium-doped fiber amplifier (EDFA), dense wavelength division multiplexing (DWDM) optical fiber transmission using modulated amplified spontaneous emission (ASE) of one of the EDFAs as the supervisory (SV) signal source. An acousto-optic tunable filter (AOTF) at the receiver side is adopted to scan the spectrum of the transmitted ASE SV signal. Using the fixed-analyzer method, PMDs of different wavelength bands that range from 1545 to 1580 nm of a DWDM fiber-optic communication system can be found by adaptively changing the radio frequency of the AOTF. The resolution and the measuring range of the proposed monitoring system can be significantly improved by cascading the AOTFs at the receiver side.

  20. A 128 Multiplexing Factor Time-Domain SQUID Multiplexer

    Science.gov (United States)

    Prêle, D.; Voisin, F.; Piat, M.; Decourcelle, T.; Perbost, C.; Chapron, C.; Rambaud, D.; Maestre, S.; Marty, W.; Montier, L.

    2016-07-01

    A cryogenic 128:1 Time-Domain Multiplexer (TDM) has been developed for the readout of kilo-pixel Transition Edge Sensor (TES) arrays dedicated to the Q&U Bolometric Interferometer for Cosmology (QUBIC) instrument which aims to measure the B-mode polarization of the Cosmic Microwave Background. Superconducting QUantum Interference Devices (SQUIDs) are usually used to read out TESs. Moreover, SQUIDs are used to build TDM by biasing sequentially the SQUIDs connected together—one for each TES. In addition to this common technique which allows a typical 32 multiplexing factor, a cryogenic integrated circuit provides a 4:1 second multiplexing stage. This cryogenic integrated circuit is one of the original part of our TDM achieving an unprecedented 128 multiplexing factor. We present these two dimension TDM stages: topology of the SQUID multiplexer, operation of the cryogenic integrated circuit, and integration of the full system to read out a TES array dedicated to the QUBIC instrument. Flux-locked loop operation in multiplexed mode is also discussed.

  1. High core count single-mode multicore fiber for dense space division multiplexing

    DEFF Research Database (Denmark)

    Aikawa, K.; Sasaki, Y.; Amma, Y.

    2016-01-01

    Multicore fibers and few-mode fibers have the potential to realize dense-space-division multiplexing systems. Several dense-space-division multiplexing system transmission experiments over multicore fibers and few-mode fibers have been demonstrated so far. Multicore fibers, including recent resul...

  2. High-Capacity Multi-Core Fibers for Space-Division Multiplexing

    DEFF Research Database (Denmark)

    Ye, Feihong

    The transmission capacity of the present optical fiber communication systems based on time division multiplexing (TDM) and wavelength-division multiplexing (WDM) using single-mode fibers (SMFs) is reaching its limit of around 100 Tbit/s per fiber due to the fiber nonlinearities, fiber fuse...... of the present SMF-based systems. Among the proposed SDM schemes, the one based on uncoupled multi-core fibers (MCFs) having multiple cores in a mutual cladding has proven effective in substantially increasing the transmission capacity per fiber with least system complexity as demonstrated in several state...... trench-assisted MCFs (TAMCFs). The traditional approach for TA-MCFs design has relied on numerical simulations, which make deriving relationships between XT and fiber structural parameters difficult and non-intuitive. As it is important to be able to understand the effects of various fiber structural...

  3. Enterprise virtual private network (VPN) with dense wavelength division multiplexing (DWDM) design

    Science.gov (United States)

    Carranza, Aparicio

    An innovative computer simulation and modeling tool for metropolitan area optical data communication networks is presented. These models address the unique requirements of Virtual Private Networks for enterprise data centers, which may comprise a mixture of protocols including ESCON, FICON, Fibre Channel, Sysplex protocols (ETR, CLO, ISC); and other links interconnected over dark fiber using Dense Wavelength Division Multiplexing (DWDM). Our models have the capability of designing a network with minimal inputs; to compute optical link budgets; suggest alternative configurations; and also optimize the design based on user-defined performance metrics. The models make use of Time Division Multiplexing (TDM) wherever possible for lower data rate traffics. Simulation results for several configurations are presented and they have been validated by means of experiments conducted on the IBM enterprise network testbed in Poughkeepsie, N.Y.

  4. Novel Equalization Techniques for Space Division Multiplexing Based on Stokes Space Update Rule

    Directory of Open Access Journals (Sweden)

    Francisco Javier Vaquero Caballero

    2017-02-01

    Full Text Available Space division multiplexing (SDM is a promising technology that aims to overcome the capacity crunch of optical communications. In this paper, we introduce the multiple-input multiple-output (MIMO Stokes Space Algorithm (SSA implemented in frequency domain, a novel equalization technique for space division multiplexing (SDM. Although different papers have been published about the SSA and its MIMO implementation, we provide for the first time an analysis of the of the convergence speed and frequency offset of the SSA compared to the least mean square (LMS. SSA algorithm can deal with higher frequency offsets and linewidths than LMS, being suitable for optical communications with higher phase noise. SSA does not need pre-compensation of frequency offset, which can be compensated after equalization without penalties. On the other hand, due to reduced convergence speed, SSA requires longer training sequences than LMS.

  5. Analysis of subsystems in wavelength-division-multiplexing networks

    DEFF Research Database (Denmark)

    Liu, Fenghai

    2001-01-01

    Wavelength division multiplexing (WDM) technology together with optical amplification has created a new era for optical communication. Transmission capacity is greatly increased by adding more and more wavelength channels into a single fiber, as well as by increasing the line rate of each channel....... WDM not only can be used to increase transmission capacity, but also to introduce a new dimension to design and implement flexible, reliable, cost effective optical networks. Optical signals may pass through several nodes in the optical network without being terminated and converted into an electrical...... signal. The impairments from the subsystems in an optical network, such as interferometric crosstalk, filtering effect, dispersion in optical components, fiber dispersion and non-linearity, will accumulate and degrade the signal, hence limit the size of the network. Therefore, the study...

  6. Frequency division multiplexed multi-color fluorescence microscope system

    Science.gov (United States)

    Le, Vu Nam; Yang, Huai Dong; Zhang, Si Chun; Zhang, Xin Rong; Jin, Guo Fan

    2017-10-01

    Grayscale camera can only obtain gray scale image of object, while the multicolor imaging technology can obtain the color information to distinguish the sample structures which have the same shapes but in different colors. In fluorescence microscopy, the current method of multicolor imaging are flawed. Problem of these method is affecting the efficiency of fluorescence imaging, reducing the sampling rate of CCD etc. In this paper, we propose a novel multiple color fluorescence microscopy imaging method which based on the Frequency division multiplexing (FDM) technology, by modulating the excitation lights and demodulating the fluorescence signal in frequency domain. This method uses periodic functions with different frequency to modulate amplitude of each excitation lights, and then combine these beams for illumination in a fluorescence microscopy imaging system. The imaging system will detect a multicolor fluorescence image by a grayscale camera. During the data processing, the signal obtained by each pixel of the camera will be processed with discrete Fourier transform, decomposed by color in the frequency domain and then used inverse discrete Fourier transform. After using this process for signals from all of the pixels, monochrome images of each color on the image plane can be obtained and multicolor image is also acquired. Based on this method, this paper has constructed and set up a two-color fluorescence microscope system with two excitation wavelengths of 488 nm and 639 nm. By using this system to observe the linearly movement of two kinds of fluorescent microspheres, after the data processing, we obtain a two-color fluorescence dynamic video which is consistent with the original image. This experiment shows that the dynamic phenomenon of multicolor fluorescent biological samples can be generally observed by this method. Compared with the current methods, this method can obtain the image signals of each color at the same time, and the color video's frame

  7. On-chip reconfigurable optical add-drop multiplexer for hybrid wavelength/mode-division-multiplexing systems.

    Science.gov (United States)

    Wang, Shipeng; Feng, Xianglian; Gao, Shiming; Shi, Yaocheng; Dai, Tingge; Yu, Hui; Tsang, Hon-Ki; Dai, Daoxin

    2017-07-15

    A silicon-based on-chip reconfigurable optical add-drop multiplexer (ROADM) is presented for hybrid wavelength-division-multiplexing-mode-division-multiplexing systems. The present ROADM consists of a four-channel mode demultiplexer, four wavelength-selective thermo-optic switches based on microring resonators, and a four-channel mode multiplexer. With the present ROADM, one can add/drop one of wavelength channels of any mode to/from the multimode bus waveguide successfully with an excess loss of 2-5 dB and an extinction ratio of ∼20  dB over a wavelength range of 1525-1555 nm.

  8. 1:N Space Division Switches for Optical Routing, Reconfigurable Interconnections, and Time and Wavelength-Division Switching Applications

    National Research Council Canada - National Science Library

    Shire, D

    1998-01-01

    ... of time-division multiplexing and demultiplexing operations. Hysteresis in the input-output transfer characteristics of the coupled in-plane lasers and VCSELs also leads to bistable operation over a range of bias conditions...

  9. Memory erasure using time-multiplexed potentials

    Science.gov (United States)

    Talukdar, Saurav; Bhaban, Shreyas; Salapaka, Murti V.

    2017-06-01

    We study the thermodynamics of a Brownian particle under the influence of a time-multiplexed harmonic potential of finite width. The memory storage mechanism and the erasure protocol based on time-multiplexed potentials are utilized to experimentally realize erasure with work performed close to Landauer's bound. We quantify the work performed on the system with respect to the duty ratio of time multiplexing, which also provides a handle for approaching reversible erasures. A Langevin dynamics based simulation model is developed for the proposed memory bit and the erasure protocol, which guides the experimental realization. The study also provides insight into transport on the microscale.

  10. Testbed for Multi-Wavelength Optical Code Division Multiplexing Based on Passive Linear Unitary Filters

    National Research Council Canada - National Science Library

    Yablonovitch, Eli

    2000-01-01

    .... The equipment purchased under this grant has permitted UCLA to purchase a number of broad-band optical components, including especially some unique code division multiplexing filters that permitted...

  11. Effect of Shot Noise on Simultaneous Sensing in Frequency Division Multiplexed Diffuse Optical Tomographic Imaging Process.

    Science.gov (United States)

    Jang, Hansol; Lim, Gukbin; Hong, Keum-Shik; Cho, Jaedu; Gulsen, Gultekin; Kim, Chang-Seok

    2017-11-28

    Diffuse optical tomography (DOT) has been studied for use in the detection of breast cancer, cerebral oxygenation, and cognitive brain signals. As optical imaging studies have increased significantly, acquiring imaging data in real time has become increasingly important. We have developed frequency-division multiplexing (FDM) DOT systems to analyze their performance with respect to acquisition time and imaging quality, in comparison with the conventional time-division multiplexing (TDM) DOT. A large tomographic area of a cylindrical phantom 60 mm in diameter could be successfully reconstructed using both TDM DOT and FDM DOT systems. In our experiment with 6 source-detector (S-D) pairs, the TDM DOT and FDM DOT systems required 6.18 and 1 s, respectively, to obtain a single tomographic data set. While the absorption coefficient of the reconstruction image was underestimated in the case of the FDM DOT, we experimentally confirmed that the abnormal region can be clearly distinguished from the background phantom using both methods.

  12. Effect of Shot Noise on Simultaneous Sensing in Frequency Division Multiplexed Diffuse Optical Tomographic Imaging Process

    Directory of Open Access Journals (Sweden)

    Hansol Jang

    2017-11-01

    Full Text Available Diffuse optical tomography (DOT has been studied for use in the detection of breast cancer, cerebral oxygenation, and cognitive brain signals. As optical imaging studies have increased significantly, acquiring imaging data in real time has become increasingly important. We have developed frequency-division multiplexing (FDM DOT systems to analyze their performance with respect to acquisition time and imaging quality, in comparison with the conventional time-division multiplexing (TDM DOT. A large tomographic area of a cylindrical phantom 60 mm in diameter could be successfully reconstructed using both TDM DOT and FDM DOT systems. In our experiment with 6 source-detector (S-D pairs, the TDM DOT and FDM DOT systems required 6.18 and 1 s, respectively, to obtain a single tomographic data set. While the absorption coefficient of the reconstruction image was underestimated in the case of the FDM DOT, we experimentally confirmed that the abnormal region can be clearly distinguished from the background phantom using both methods.

  13. On-chip two-mode division multiplexing using tapered directional coupler-based mode multiplexer and demultiplexer

    DEFF Research Database (Denmark)

    Ding, Yunhong; Xu, Jing; Da Ros, Francesco

    2013-01-01

    Abstract: We demonstrate a novel on-chip two-mode division multiplexing circuit using a tapered directional coupler-based TE0&TE1 mode multiplexer and demultiplexer on the silicon-on-insulator platform. A low insertion loss (0.3 dB), low mode crosstalk (< −16 dB), wide bandwidth (~100 nm), and la......Abstract: We demonstrate a novel on-chip two-mode division multiplexing circuit using a tapered directional coupler-based TE0&TE1 mode multiplexer and demultiplexer on the silicon-on-insulator platform. A low insertion loss (0.3 dB), low mode crosstalk (...), and large fabrication tolerance (20 nm) are measured. An on-chip mode multiplexing experiment is carried out on the fabricated circuit with non return-to-zero (NRZ) on-off keying (OOK) signals at 40 Gbit/s. The experimental results show clear eye diagrams and moderate power penalty for both TE0 and TE1...

  14. A resource-efficient network interface supporting low latency reconfiguration of virtual circuits in time-division multiplexing networks-on-chip

    DEFF Research Database (Denmark)

    Sørensen, Rasmus Bo; Pezzarossa, Luca; Schoeberl, Martin

    2017-01-01

    to all slave nodes for a 16-core plat- form in between 500 and 3500 clock cycles. The results also show that the hardware cost for an FPGA implementation of our architecture is considerably smaller than other network-on-chips with similar re- configuration functionalities, and that the worst-case time...

  15. Consideration for wavelength multiplexing versus time multiplexing in optical transport network

    DEFF Research Database (Denmark)

    Limal, Emmanuel; Stubkjær, Kristian Elmholdt

    1999-01-01

    We compare optical wavelength multiplexing and time multiplexing techniquesfor optical transport network by studying the space switch sizes of OXCs andtheir interfaces as a function of the fraction of add/drop traffic....

  16. Underwater optical communications using orbital angular momentum-based spatial division multiplexing

    Science.gov (United States)

    Willner, Alan E.; Zhao, Zhe; Ren, Yongxiong; Li, Long; Xie, Guodong; Song, Haoqian; Liu, Cong; Zhang, Runzhou; Bao, Changjing; Pang, Kai

    2018-02-01

    In this paper, we review high-capacity underwater optical communications using orbital angular momentum (OAM)-based spatial division multiplexing. We discuss methods to generate and detect blue-green optical data-carrying OAM beams as well as various underwater effects, including attenuation, scattering, current, and thermal gradients on OAM beams. Attention is also given to the system performance of high-capacity underwater optical communication links using OAM-based space division multiplexing. The paper closes with a discussion of a digital signal processing (DSP) algorithm to mitigate the inter-mode crosstalk caused by thermal gradients.

  17. Comparison of wavelength-division-multiplexed distributed fiber Raman amplifier networks for sensors.

    Science.gov (United States)

    Diaz, Silvia; Lopez-Amo, Manuel

    2006-02-20

    A novel distributed fiber Raman amplified star topology used for optical sensor wavelength-division multiplexing is proposed. The performance of this star configuration is compared to an optically amplified bus topology. The two different network topologies are compared and demonstrated experimentally and theoretically as means of gathering information from four wavelength-division-multiplexed photonic sensors. We report how the star configuration yields better signal-to-noise ratios than the bus topology. Furthermore, this improvement is made without increasing the complexity of the regular star topologies.

  18. High-Speed Turbo-TCM-Coded Orthogonal Frequency-Division Multiplexing Ultra-Wideband Systems

    Directory of Open Access Journals (Sweden)

    Wang Yanxia

    2006-01-01

    Full Text Available One of the UWB proposals in the IEEE P802.15 WPAN project is to use a multiband orthogonal frequency-division multiplexing (OFDM system and punctured convolutional codes for UWB channels supporting a data rate up to 480 Mbps. In this paper, we improve the proposed system using turbo TCM with QAM constellation for higher data rate transmission. We construct a punctured parity-concatenated trellis codes, in which a TCM code is used as the inner code and a simple parity-check code is employed as the outer code. The result shows that the system can offer a much higher spectral efficiency, for example, 1.2 Gbps, which is 2.5 times higher than the proposed system. We identify several essential requirements to achieve the high rate transmission, for example, frequency and time diversity and multilevel error protection. Results are confirmed by density evolution.

  19. Demonstration of 2×ONU 80 Gbps direct detection colorless polarization division multiplexing frequency division multiplexing passive optical network uplink transmission

    Science.gov (United States)

    Wang, Zhixin; Xu, Yinfan; Wang, Yanyi; Wang, Yuanquan; Chi, Nan

    2016-04-01

    In this study, we propose and experimentally demonstrate a simple direct detection passive optical network (PON) uplink transmission scheme based on frequency division multiplexing and polarization division multiplexing. Two optical network units (ONUs) are assigned to two different frequency bands at two different orthogonal polarization directions. At the optical line terminal, both ONU signals can be simultaneously detected by a single photodiode without utilizing any polarization control, polarization selection, or complicated polarization demultiplexing algorithms. As a proof-of-concept, the 2×ONU 80 Gbps 32-ary quadrature amplitude modulation Nyquist single carrier signals are successfully transmitted over 2 km standard single mode fiber or 20 km large effective area fiber with the assistance of frequency domain equalization and decision-directed least-mean-square. The measured bit error rate can be below the 7% pre-forward error correction threshold of 3.8×10-3. Meanwhile, this scheme is compatible with the widely used wavelength-division multiplexed PON, which shows the promising potential and feasibility of this proposal.

  20. Advanced Spatial-Division Multiplexed Measurement Systems Propositions-From Telecommunication to Sensing Applications: A Review.

    Science.gov (United States)

    Weng, Yi; Ip, Ezra; Pan, Zhongqi; Wang, Ting

    2016-08-30

    The concepts of spatial-division multiplexing (SDM) technology were first proposed in the telecommunications industry as an indispensable solution to reduce the cost-per-bit of optical fiber transmission. Recently, such spatial channels and modes have been applied in optical sensing applications where the returned echo is analyzed for the collection of essential environmental information. The key advantages of implementing SDM techniques in optical measurement systems include the multi-parameter discriminative capability and accuracy improvement. In this paper, to help readers without a telecommunication background better understand how the SDM-based sensing systems can be incorporated, the crucial components of SDM techniques, such as laser beam shaping, mode generation and conversion, multimode or multicore elements using special fibers and multiplexers are introduced, along with the recent developments in SDM amplifiers, opto-electronic sources and detection units of sensing systems. The examples of SDM-based sensing systems not only include Brillouin optical time-domain reflectometry or Brillouin optical time-domain analysis (BOTDR/BOTDA) using few-mode fibers (FMF) and the multicore fiber (MCF) based integrated fiber Bragg grating (FBG) sensors, but also involve the widely used components with their whole information used in the full multimode constructions, such as the whispering gallery modes for fiber profiling and chemical species measurements, the screw/twisted modes for examining water quality, as well as the optical beam shaping to improve cantilever deflection measurements. Besides, the various applications of SDM sensors, the cost efficiency issue, as well as how these complex mode multiplexing techniques might improve the standard fiber-optic sensor approaches using single-mode fibers (SMF) and photonic crystal fibers (PCF) have also been summarized. Finally, we conclude with a prospective outlook for the opportunities and challenges of SDM

  1. Advanced Spatial-Division Multiplexed Measurement Systems Propositions—From Telecommunication to Sensing Applications: A Review

    Directory of Open Access Journals (Sweden)

    Yi Weng

    2016-08-01

    Full Text Available The concepts of spatial-division multiplexing (SDM technology were first proposed in the telecommunications industry as an indispensable solution to reduce the cost-per-bit of optical fiber transmission. Recently, such spatial channels and modes have been applied in optical sensing applications where the returned echo is analyzed for the collection of essential environmental information. The key advantages of implementing SDM techniques in optical measurement systems include the multi-parameter discriminative capability and accuracy improvement. In this paper, to help readers without a telecommunication background better understand how the SDM-based sensing systems can be incorporated, the crucial components of SDM techniques, such as laser beam shaping, mode generation and conversion, multimode or multicore elements using special fibers and multiplexers are introduced, along with the recent developments in SDM amplifiers, opto-electronic sources and detection units of sensing systems. The examples of SDM-based sensing systems not only include Brillouin optical time-domain reflectometry or Brillouin optical time-domain analysis (BOTDR/BOTDA using few-mode fibers (FMF and the multicore fiber (MCF based integrated fiber Bragg grating (FBG sensors, but also involve the widely used components with their whole information used in the full multimode constructions, such as the whispering gallery modes for fiber profiling and chemical species measurements, the screw/twisted modes for examining water quality, as well as the optical beam shaping to improve cantilever deflection measurements. Besides, the various applications of SDM sensors, the cost efficiency issue, as well as how these complex mode multiplexing techniques might improve the standard fiber-optic sensor approaches using single-mode fibers (SMF and photonic crystal fibers (PCF have also been summarized. Finally, we conclude with a prospective outlook for the opportunities and challenges of

  2. Advanced Spatial-Division Multiplexed Measurement Systems Propositions—From Telecommunication to Sensing Applications: A Review

    Science.gov (United States)

    Weng, Yi; Ip, Ezra; Pan, Zhongqi; Wang, Ting

    2016-01-01

    The concepts of spatial-division multiplexing (SDM) technology were first proposed in the telecommunications industry as an indispensable solution to reduce the cost-per-bit of optical fiber transmission. Recently, such spatial channels and modes have been applied in optical sensing applications where the returned echo is analyzed for the collection of essential environmental information. The key advantages of implementing SDM techniques in optical measurement systems include the multi-parameter discriminative capability and accuracy improvement. In this paper, to help readers without a telecommunication background better understand how the SDM-based sensing systems can be incorporated, the crucial components of SDM techniques, such as laser beam shaping, mode generation and conversion, multimode or multicore elements using special fibers and multiplexers are introduced, along with the recent developments in SDM amplifiers, opto-electronic sources and detection units of sensing systems. The examples of SDM-based sensing systems not only include Brillouin optical time-domain reflectometry or Brillouin optical time-domain analysis (BOTDR/BOTDA) using few-mode fibers (FMF) and the multicore fiber (MCF) based integrated fiber Bragg grating (FBG) sensors, but also involve the widely used components with their whole information used in the full multimode constructions, such as the whispering gallery modes for fiber profiling and chemical species measurements, the screw/twisted modes for examining water quality, as well as the optical beam shaping to improve cantilever deflection measurements. Besides, the various applications of SDM sensors, the cost efficiency issue, as well as how these complex mode multiplexing techniques might improve the standard fiber-optic sensor approaches using single-mode fibers (SMF) and photonic crystal fibers (PCF) have also been summarized. Finally, we conclude with a prospective outlook for the opportunities and challenges of SDM

  3. Interferometric characterization of few-mode fibers (FMF) for mode-division multiplexing (MDM)

    DEFF Research Database (Denmark)

    Muliar, Olena; Usuga Castaneda, Mario A.; Rottwitt, Karsten

    2015-01-01

    ), commonly used in a MDM scenario. This experimental technique requires the use of a Mach-Zehnder interferometer, where the reference's path length is controlled by an optical delay line. The interference between the output beams of reference and fiber under test (FUT) is recorded on a CCD camera...... or optical modes. Mode division multiplexing (MDM) appears in this context as a promising and viable solution for such capacity increase, since it utilizes multiple spatial modes of an optical fiber as individual communication channels for data transmission. In order to evaluate its performance, a MDM system...... requires advanced characterization methods with regard to the modal content of its photonics components and in particular of the fibers involved for data transmission. In this contribution we present a time-domain interferometric technique for a full modal characterization of few mode fibers (FMF...

  4. Distributed MIMO chaotic radar based on wavelength-division multiplexing technology.

    Science.gov (United States)

    Yao, Tingfeng; Zhu, Dan; Ben, De; Pan, Shilong

    2015-04-15

    A distributed multiple-input multiple-output chaotic radar based on wavelength-division multiplexing technology (WDM) is proposed and demonstrated. The wideband quasi-orthogonal chaotic signals generated by different optoelectronic oscillators (OEOs) are emitted by separated antennas to gain spatial diversity against the fluctuation of a target's radar cross section and enhance the detection capability. The received signals collected by the receive antennas and the reference signals from the OEOs are delivered to the central station for joint processing by exploiting WDM technology. The centralized signal processing avoids precise time synchronization of the distributed system and greatly simplifies the remote units, which improves the localization accuracy of the entire system. A proof-of-concept experiment for two-dimensional localization of a metal target is demonstrated. The maximum position error is less than 6.5 cm.

  5. Joint digital signal processing of Nyquist-wavelength division multiplexing superchannel with group detection

    Science.gov (United States)

    Zhang, Tianyun; Yao, Shuchang; Fu, Songnian; Tang, Ming; Liu, Deming

    2014-12-01

    To relax the limited sampling rate of an analog-to-digital converter (ADC) and to reduce the complexity of conventional fiber-optical superchannel coherent detection, we propose and demonstrate a joint digital signal processing (DSP) technique of Nyquist-wavelength division multiplexing superchannel with group detection. At the receiver side, three Nyquist-spaced channels with 12.5 Gbaud polarization multiplexing-quadrature phase shift keying signals are group detected with a sampling rate per channel of 1.33 times over the normal sampling rate. A modified carrier separation technique is then put forward to retrieve the high-frequency interference component of both the designated channel and its adjacent channels, which can subsequently be used to recover the designated channel with new constant modulus algorithm-based joint multiinput-multioutput equalizers. The results show that the proposed group detection and joint DSP algorithm can simultaneously improve the transmission performance and reduce the complexity of both the transmitter and receiver, regardless of bandwidth restrictions from the waveshaper, ADC module, and coherent receiver.

  6. 100G shortwave wavelength division multiplexing solutions for multimode fiber data links

    DEFF Research Database (Denmark)

    Cimoli, Bruno; Estaran Tolosa, Jose Manuel; Rodes Lopez, Guillermo Arturo

    2016-01-01

    We investigate an alternative 100G solution for optical short-range data center links. The presented solution adopts wavelength division multiplexing technology to transmit four channels of 25G over a multimode fiber. A comparative performance analysis of the wavelength-grid selection for the wav...

  7. Fiber optic data bus using Frequency Division Multiplexing (FDM) and an asymmetric coupler

    Science.gov (United States)

    Zanger, M.; Webster, L.

    1984-01-01

    A fiber optic data bus, using frequency division multiplexing (FDM) is discussed. The use of FDM is motivated by the need to avoid central control of the bus operation. A major difficulty of such a data bus is introduced by the couplers. An efficient low loss access coupler with an asymmetric structure is presented, and manufacturing processes for the coupler are proposed.

  8. High-Spatial-Multiplicity Multicore Fibers for Future Dense Space-Division-Multiplexing Systems

    DEFF Research Database (Denmark)

    Matsuo, Shoichiro; Takenaga, Katsuhiro; Sasaki, Yusuke

    2016-01-01

    Multicore fibers and few-mode fibers have potential application in realizing dense-space-division multiplexing systems. However, there are some tradeoff requirements for designing the fibers. In this paper, the tradeoff requirements such as spatial channel count, crosstalk, differential mode dela...

  9. Frequency-division multiplexer and demultiplexer for terahertz wireless links.

    Science.gov (United States)

    Ma, Jianjun; Karl, Nicholas J; Bretin, Sara; Ducournau, Guillaume; Mittleman, Daniel M

    2017-09-28

    The development of components for terahertz wireless communications networks has become an active and growing research field. However, in most cases these components have been studied using a continuous or broadband-pulsed terahertz source, not using a modulated data stream. This limitation may mask important aspects of the performance of the device in a realistic system configuration. We report the characterization of one such device, a frequency multiplexer, using modulated data at rates up to 10 gigabits per second. We also demonstrate simultaneous error-free transmission of two signals at different carrier frequencies, with an aggregate data rate of 50 gigabits per second. We observe that the far-field spatial variation of the bit error rate is different from that of the emitted power, due to a small nonuniformity in the angular detection sensitivity. This is likely to be a common feature of any terahertz communication system in which signals propagate as diffracting beams not omnidirectional broadcasts.There is growing interest in the development of components to facilitate wireless communications in the terahertz but the characterization of these systems involve an unmodulated input. Here the authors demonstrate multiplexing and demultiplexing of data streams in the terahertz range using a real data link.

  10. Performance Analysis of Optical Code Division Multiplex System

    Science.gov (United States)

    Kaur, Sandeep; Bhatia, Kamaljit Singh

    2013-12-01

    This paper presents the Pseudo-Orthogonal Code generator for Optical Code Division Multiple Access (OCDMA) system which helps to reduce the need of bandwidth expansion and improve spectral efficiency. In this paper we investigate the performance of multi-user OCDMA system to achieve data rate more than 1 Tbit/s.

  11. Quantum metropolitan optical network based on wavelength division multiplexing.

    Science.gov (United States)

    Ciurana, A; Martínez-Mateo, J; Peev, M; Poppe, A; Walenta, N; Zbinden, H; Martín, V

    2014-01-27

    Quantum Key Distribution (QKD) is maturing quickly. However, the current approaches to its application in optical networks make it an expensive technology. QKD networks deployed to date are designed as a collection of point-to-point, dedicated QKD links where non-neighboring nodes communicate using the trusted repeater paradigm. We propose a novel optical network model in which QKD systems share the communication infrastructure by wavelength multiplexing their quantum and classical signals. The routing is done using optical components within a metropolitan area which allows for a dynamically any-to-any communication scheme. Moreover, it resembles a commercial telecom network, takes advantage of existing infrastructure and utilizes commercial components, allowing for an easy, cost-effective and reliable deployment.

  12. In-plane wavelength division de-multiplexing using photonic crystals

    DEFF Research Database (Denmark)

    Frandsen, Lars Hagedorn; Harpøth, Anders; Hede, K. K.

    We demonstrate a novel concept for in-plane coarse wavelength division de-multiplexing in integrated photonic circuits utilizing planar photonic crystal waveguides (PhCWs) fabricated in a silicon-on-insulator material. The filtering of wavelength channels is realized by shifting the cut......-off frequency of the fundamental photonic bandgap mode. The shift is obtained by modifying the size of the border holes in consecutive sections of the PhCW1. Simulations and experimental proof-of-principle of the four-channel de-multiplexer will be presented. 1A. Adibi et al., Electron. Lett. 36, 1376...

  13. Quantum key distribution for 10 Gb/s dense wavelength division multiplexing networks

    International Nuclear Information System (INIS)

    Patel, K. A.; Dynes, J. F.; Lucamarini, M.; Choi, I.; Sharpe, A. W.; Yuan, Z. L.; Shields, A. J.; Penty, R. V.

    2014-01-01

    We demonstrate quantum key distribution (QKD) with bidirectional 10 Gb/s classical data channels in a single fiber using dense wavelength division multiplexing. Record secure key rates of 2.38 Mbps and fiber distances up to 70 km are achieved. Data channels are simultaneously monitored for error-free operation. The robustness of QKD is further demonstrated with a secure key rate of 445 kbps over 25 km, obtained in the presence of data lasers launching conventional 0 dBm power. We discuss the fundamental limit for the QKD performance in the multiplexing environment

  14. Performance analysis of long reach colorless wavelength division multiplexed-orthogonal frequency division multiplexing-passive optical network with broadcast capability

    Science.gov (United States)

    Pandey, Gaurav; Goel, Aditya

    2016-07-01

    A colorless wavelength division multiplexed-orthogonal frequency division multiplexing-passive optical network (WDM-OFDM-PON) is presented, which is capable of supporting symmetric 10 Gbps downlink direct detection (DD) OFDM unicast signal, broadcast signal, and uplink on-off keying (OOK) signal up to 60 km that includes both single mode and dispersion compensation fiber. At each optical network unit (ONU), DD has been used to receive downlink unicast and broadcast OFDM data. A delay interferometer (DI) has been used at a central office to achieve 10 Gbps uplink signal transmission over 60 km distance utilizing a reflective semiconductor optical amplifier (bandwidth=1.5 GHz) at the ONU because DI works as a vestigial sideband filter and an optical equalizer. Broadcast channel does not affect the system performance because it generates a limited interference of the order of 0.1 to 0.28 dB to downlink and uplink channels, and this interference is distributed to every ONU. For bit error rate of 10-9, the receiver sensitivity of -24, -23.1, and -20.14 dBm is achieved by simulating downlink OFDM unicast channels, OFDM broadcast channel, and uplink OOK unicast channels, respectively, for a symmetric data rate of 10 Gbps over 60 km.

  15. Increase of nonlinear signal distortions due to linear mode coupling in space division multiplexed systems

    DEFF Research Database (Denmark)

    Kutluyarov, Ruslan V.; Bagmanov, Valeriy Kh; Antonov, Vyacheslav V.

    2017-01-01

    This paper is focused on the analysis of linear and nonlinear mode coupling in space division multiplexed (SDM) optical communications over step-index fiber in few-mode regime. Linear mode coupling is caused by the fiber imperfections, while the nonlinear coupling is caused by the Kerr-nonlineari......This paper is focused on the analysis of linear and nonlinear mode coupling in space division multiplexed (SDM) optical communications over step-index fiber in few-mode regime. Linear mode coupling is caused by the fiber imperfections, while the nonlinear coupling is caused by the Kerr...... to a significant increase of the nonlinear distortions. It is necessary to take this phenomenon into account in SDM systems with linear compensation of mode coupling, because the nonlinear distortions may sufficiently decrease the effectiveness of the compensation....

  16. Linearly polarized vector modes: enabling MIMO-free mode-division multiplexing.

    Science.gov (United States)

    Wang, Lixian; Nejad, Reza Mirzaei; Corsi, Alessandro; Lin, Jiachuan; Messaddeq, Younès; Rusch, Leslie; LaRochelle, Sophie

    2017-05-15

    We experimentally investigate mode-division multiplexing in an elliptical ring core fiber (ERCF) that supports linearly polarized vector modes (LPV). Characterization show that the ERCF exhibits good polarization maintaining properties over eight LPV modes with effective index difference larger than 1 × 10 -4 . The ERCF further displays stable mode power and polarization extinction ratio when subjected to external perturbations. Crosstalk between the LPV modes, after propagating through 0.9 km ERCF, is below -14 dB. By using six LPV modes as independent data channels, we achieved the transmission of 32 Gbaud QPSK over 0.9 km ERCF without any multiple-input-multiple-output (MIMO) or polarization-division multiplexing (PDM) signal processing.

  17. Spatial-phase code-division multiple-access system with multiplexed Fourier holography switching for reconfigurable optical interconnection

    Science.gov (United States)

    Takasago, Kazuya; Takekawa, Makoto; Shirakawa, Atsushi; Kannari, Fumihiko

    2000-05-01

    A new, to our knowledge, space-variant optical interconnection system based on a spatial-phase code-division multiple-access technique with multiplexed Fourier holography is described. In this technique a signal beam is spread over wide spatial frequencies by an M -sequence pseudorandom phase code. At a receiver side a selected signal beam is properly decoded, and at the same time its spatial pattern is shaped with a Fourier hologram, which is recorded by light that is encoded with the same M -sequence phase mask as the desired signal beam and by light whose spatial beam pattern is shaped to a signal routing pattern. Using the multiplexed holography, we can simultaneously route multisignal flows into individually specified receiver elements. The routing pattern can also be varied by means of switching the encoding phase code or replacing the hologram. We demonstrated a proof-of-principle experiment with a doubly multiplexed hologram that enables simultaneous routing of two signal beams. Using a numerical model, we showed that the proposed scheme can manage more than 250 routing patterns for one signal flow with one multiplexed hologram at a signal-to-noise ratio of 5.

  18. Nonlinear graphene-based nanophotonic switch working in dense wavelength division multiplexing (DWDM) systems

    Science.gov (United States)

    Wirth L., A. J.; Ferreira, A. C.; Sombra, A. S. B.

    2017-05-01

    Fiber-based devices for operation in fully optical networks are relatively large in size and can not be used in photonic integrated circuits (PICs). We have developed an efficient graphene-based nanophotonic switching nanocell, working in linear regime (cross state) and in non-linear regime (bar state) with relatively low optical power, so that they can be cascaded and integrated in PICs. Indeed, that device is a fully optical switch, which can work in dense wavelength division multiplexing systems.

  19. Semiconductor laser with a birefringent external cavity for information systems with wavelength division multiplexing

    Energy Technology Data Exchange (ETDEWEB)

    Paranin, V D; Matyunin, S A; Tukmakov, K N [S.P. Korolev Samara State Aerospace University, Samara (Russian Federation)

    2013-10-31

    The spectrum of a semiconductor laser with a birefringent external Gires – Tournois cavity is studied. The generation of two main laser modes corresponding to the ordinary and extraordinary wave resonances is found. It is shown that the radiation spectrum is controlled with a high energy efficiency without losses for spectral filtration. The possibility of using two-mode lasing in optical communication systems with wavelength division multiplexing is shown. (control of laser radiation parameters)

  20. Visible Wavelength Division Multiplex System for use as a Instructional Lab System for Higher Education

    OpenAIRE

    Fischer, Ulrich H. P.; Schmidt, Michael; Volmer, Tino; Weigl, Bjoern; Just, Jens-Uwe

    2007-01-01

    The demand for high-speed digital communication such as data, video, and the broadband Internet increases, the required throughput of the modules in communications systems will also increase. In this paper we present an instruction system, which works on the basis of a wavelength division multiplex (WDM) system in the visible spectrum. It is specialised for the academic training at universities to demonstrate the principles of the WDM techniques. It works platform independent in combination w...

  1. Tailoring Chirped Moiré Fiber Bragg Gratings for Wavelength-Division-Multiplexing and Optical Code-Division Multiple-Access Applications

    Science.gov (United States)

    Chen, Lawrence R.; Smith, Peter W. E.

    The design and fabrication of chirped Moiré fiber Bragg gratings (CMGs) are presented, which can be used in either (1) transmission as passband filters for providing wavelength selectivity in wavelength-division-multiplexed (WDM) systems or (2) reflection as encoding/decoding elements to decompose short broadband pulses in both wavelength and time in order to implement an optical code-division multiple-access (OCDMA) system. In transmission, the fabricated CMGs have single or multiple flattened passbands ( 12 dB isolation and near constant in-band group delay. It is shown that these filters do not produce any measurable dispersion-induced power penalties when used to provide wavelength selectivity in 2.5 Gbit/s systems. It is also demonstrated how CMGs can be used in reflection to encode/decode short pulses from a wavelength-tunable mode-locked Er-doped fiber laser.

  2. Direction-division multiplexed holographic free-electron-driven light sources

    Science.gov (United States)

    Clarke, Brendan P.; MacDonald, Kevin F.; Zheludev, Nikolay I.

    2018-01-01

    We report on a free-electron-driven light source with a controllable direction of emission. The source comprises a microscopic array of plasmonic surface-relief holographic domains, each tailored to direct electron-induced light emission at a selected wavelength into a collimated beam in a prescribed direction. The direction-division multiplexed source is tested by driving it with the 30 kV electron beam of a scanning electron microscope: light emission, at a wavelength of 800 nm in the present case, is switched among different output angles by micron-scale repositioning of the electron injection point among domains. Such sources, with directional switching/tuning possible at picosecond timescales, may be applied to field-emission and surface-conduction electron-emission display technologies, optical multiplexing, and charged-particle-beam position metrology.

  3. Frequency-Division Multiplexing for Electrical Impedance Tomography in Biomedical Applications

    Directory of Open Access Journals (Sweden)

    Yair Granot

    2007-01-01

    Full Text Available Electrical impedance tomography (EIT produces an image of the electrical impedance distribution of tissues in the body, using electrodes that are placed on the periphery of the imaged area. These electrodes inject currents and measure voltages and from these data, the impedance can be computed. Traditional EIT systems usually inject current patterns in a serial manner which means that the impedance is computed from data collected at slightly different times. It is usually also a time-consuming process. In this paper, we propose a method for collecting data concurrently from all of the current patterns in biomedical applications of EIT. This is achieved by injecting current through all of the current injecting electrodes simultaneously, and measuring all of the resulting voltages at once. The signals from various current injecting electrodes are separated by injecting different frequencies through each electrode. This is called frequency-division multiplexing (FDM. At the voltage measurement electrodes, the voltage related to each current injecting electrode is isolated by using Fourier decomposition. In biomedical applications, using different frequencies has important implications due to dispersions as the tissue's electrical properties change with frequency. Another significant issue arises when we are recording data in a dynamic environment where the properties change very fast. This method allows simultaneous measurements of all the current patterns, which may be important in applications where the tissue changes occur in the same time scale as the measurement. We discuss the FDM EIT method from the biomedical point of view and show results obtained with a simple experimental system.

  4. VCSELs with a high-index-contrast grating for mode-division multiplexing

    DEFF Research Database (Denmark)

    Ran, Qijiang; Mørk, Jesper

    2013-01-01

    A novel vertical-cavity surface-emitting laser (VCSEL) structure for space division multiplexing (SDM) is proposed and numerically investigated. This laser structure employs a high-index-contrast grating (HCG) as a light-emitting mirror. The reflectivity of the HCG mirror is spatially modulated...... to excite a specific transverse mode, while its transmission phase is kept spatially constant. This laser can provide the selective excitation of a specific transverse mode, leading to a high coupling efficiency to a few mode fiber. Compared to the phase plate approach in current SDM systems, the HCG...

  5. High Speed Inter-Satellite Communication System by Incorporating Hybrid Polarization-Wavelength Division Multiplexing Scheme

    Science.gov (United States)

    Chaudhary, Sushank; Chaudhary, Neha; Sharma, Saurabh; Choudhary, BC

    2017-12-01

    Inter-Satellite communication is one of remarkable technologies that can be used to communicate between satellites. This work is focused to carry out the investigations of polarization scheme by incorporating dense wavelength division multiplexing (DWDM) scheme in inter-satellite communication system. A 20×6 Gbps data are transported over inter-satellite optical link having span of 5,000 km to realize the total data transmission of 120 Gbps. Moreover, results are also reported with the effect of RZ and NRZ modulation schemes. The performance of proposed inter-satellite communication link is measured in terms of signal-to-noise ratio, received power and eye diagrams.

  6. Experimental demonstration of optical stealth transmission over wavelength-division multiplexing network.

    Science.gov (United States)

    Zhu, Huatao; Wang, Rong; Pu, Tao; Fang, Tao; Xiang, Peng; Zheng, Jilin; Tang, Yeteng; Chen, Dalei

    2016-08-10

    We propose and experimentally demonstrate an optical stealth transmission system over a 200 GHz-grid wavelength-division multiplexing (WDM) network. The stealth signal is processed by spectral broadening, temporal spreading, and power equalizing. The public signal is suppressed by multiband notch filtering at the stealth channel receiver. The interaction between the public and stealth channels is investigated in terms of public-signal-to-stealth-signal ratio, data rate, notch-filter bandwidth, and public channel number. The stealth signal can transmit over 80 km single-mode fiber with no error. Our experimental results verify the feasibility of optical steganography used over the existing WDM-based optical network.

  7. Eliminating four-wave-mixing crosstalk in wavelength-division-multiplexing systems

    Science.gov (United States)

    Kwong, Wing C.; Yang, Guu-Chang

    1996-11-01

    To reduce four-wave-mixing crosstalk in long-haul wavelength-division multiplexing (WDM) lightwave systems, the use of unequally spaced channels has recently been proposed. Instead of being solved y integer linear programming, the unequal-spaced channel-allocation problem is here treated as constructing suitable optical orthogonal codes in optical code-division multiple-access (CDMA). Three 'algebraic' algorithms on finding the frequency locations of unequally spaced WDM channels are reported. The constructions are based on generating optical CDMA codewords with a predetermined pulse separation and 'aperiodic' autocorrelation sidelobes no greater than one. The algorithms potentially provide a fast and simple alternative to solve the problem, besides the recently reported computer-search method.

  8. Mode division multiplexing using an orbital angular momentum mode sorter and MIMO-DSP over a graded-index few-mode optical fibre.

    Science.gov (United States)

    Huang, Hao; Milione, Giovanni; Lavery, Martin P J; Xie, Guodong; Ren, Yongxiong; Cao, Yinwen; Ahmed, Nisar; An Nguyen, Thien; Nolan, Daniel A; Li, Ming-Jun; Tur, Moshe; Alfano, Robert R; Willner, Alan E

    2015-10-09

    Mode division multiplexing (MDM)- using a multimode optical fiber's N spatial modes as data channels to transmit N independent data streams - has received interest as it can potentially increase optical fiber data transmission capacity N-times with respect to single mode optical fibers. Two challenges of MDM are (1) designing mode (de)multiplexers with high mode selectivity (2) designing mode (de)multiplexers without cascaded beam splitting's 1/N insertion loss. One spatial mode basis that has received interest is that of orbital angular momentum (OAM) modes. In this paper, using a device referred to as an OAM mode sorter, we show that OAM modes can be (de)multiplexed over a multimode optical fiber with higher than -15 dB mode selectivity and without cascaded beam splitting's 1/N insertion loss. As a proof of concept, the OAM modes of the LP11 mode group (OAM-1,0 and OAM+1,0), each carrying 20-Gbit/s polarization division multiplexed and quadrature phase shift keyed data streams, are transmitted 5km over a graded-index, few-mode optical fibre. Channel crosstalk is mitigated using 4 × 4 multiple-input-multiple-output digital-signal-processing with <1.5 dB power penalties at a bit-error-rate of 2 × 10(-3).

  9. PLC-based mode multi/demultiplexers for mode division multiplexing

    Science.gov (United States)

    Saitoh, Kunimasa; Hanzawa, Nobutomo; Sakamoto, Taiji; Fujisawa, Takeshi; Yamashita, Yoko; Matsui, Takashi; Tsujikawa, Kyozo; Nakajima, Kazuhide

    2017-02-01

    Recently developed PLC-based mode multi/demultiplexers (MUX/DEMUXs) for mode division multiplexing (MDM) transmission are reviewed. We firstly show the operation principle and basic characteristics of PLC-based MUX/DEMUXs with an asymmetric directional coupler (ADC). We then demonstrate the 3-mode (2LP-mode) multiplexing of the LP01, LP11a, and LP11b modes by using fabricated PLC-based mode MUX/DEMUX on one chip. In order to excite LP11b mode in the same plane, a PLC-based LP11 mode rotator is introduced. Finally, we show the PLC-based 6-mode (4LP-mode) MUX/DEMUX with a uniform height by using ADCs, LP11 mode rotators, and tapered waveguides. It is shown that the LP21a mode can be excited from the LP11b mode by using ADC, and the two nearly degenerated LP21b and LP02 modes can be (de)multiplexed separately by using tapered mode converter from E13 (E31) mode to LP21b (LP02) mode.

  10. Performance of Spatial Division Multiplexing MIMO with Frequency Domain Packet Scheduling

    DEFF Research Database (Denmark)

    Wei, Na; Pokhariyal, Akhilesh; Sørensen, Troels Bundgaard

    2008-01-01

    This paper addresses the performance of Spatial Division Multiplexing (SDM) Multiple-input Multiple-output (MIMO) techniques together with Frequency Domain Packet Scheduling (FDPS) in both theory and practice. We start with a theoretical analysis under some ideal assumptions to derive the perform......This paper addresses the performance of Spatial Division Multiplexing (SDM) Multiple-input Multiple-output (MIMO) techniques together with Frequency Domain Packet Scheduling (FDPS) in both theory and practice. We start with a theoretical analysis under some ideal assumptions to derive...... the performance bounds of SDM-FDPS. To facilitate the analysis, a unified SINR concept is utilized to make a fair comparison of MIMO schemes with different number of spatial streams. The effect of packet scheduling is included in the post-scheduling SINR distribution using an analytical model. Based on that......, the performance bounds are obtained with a more realistic SINR to throughput mapping metric. The system-level performance of SDM-FDPS has been evaluated under practical constraints using detailed simulations based on the UTRAN Long Term Evolution (LTE) downlink cellular system framework. The purpose...

  11. Transmission performance of a 400 Gbit s−1 all-optical orthogonal frequency division multiplexing system

    International Nuclear Information System (INIS)

    Tang, Jing; Xia, Min; Li, Wei; Yang, Kecheng; Liu, Deming; Huang, Benxiong

    2013-01-01

    The performance of a 400 Gbit s −1 all-optical orthogonal frequency division multiplexing (AO-OFDM) transmission system is researched with the effects of chromatic dispersion, fiber nonlinearities and amplified spontaneous emission (ASE) noise. The numerical simulation results show that the AO-OFDM system can provide a higher spectral efficiency (SE) and a better sensitivity than a dense wavelength division multiplexing (DWDM) system. The accumulated dispersion tolerance of the system reaches 330 ps nm −1 . When transmitted over single-span 80 km single-mode fiber (SMF), AO-OFDM signals have a 1.5 dB power penalty at BER=10 −3 due to the fiber Kerr nonlinearities, and the receiver sensitivity of the AO-OFDM system is obviously degraded with increasing incident optical power. In multispan transmission, the interaction of the fiber Kerr nonlinearity with the ASE noise is analyzed. A 1320 km maximum transmission distance is realized at 0 dBm incident optical power. The transmission discount due to the ASE noise and fiber nonlinearities in the AO-OFDM system is calculated. Fiber Kerr nonlinearities impose a greater limitation on the performance of the AO-OFDM system for long-distance transmission. All results clearly indicate the feasibility of AO-OFDM technology for next generation 400 Gbit s −1 fiber communication and multiservice networks. (paper)

  12. Interleaved single-carrier frequency-division multiplexing for optical interconnects.

    Science.gov (United States)

    Zhou, Ji; Qiao, Yaojun; Yu, Jianjun; Shi, Jianyang; Cheng, Qixiang; Tang, Xizi; Guo, Mengqi

    2017-05-01

    In this paper, we propose a real-valued interleaved single-carrier frequency-division multiplexing (I-SC-FDM) scheme for intensity-modulation and direct-detection optical interconnects. By simplifying the encoding structure, the computational complexity can be reduced from Nlog2N complex multiplications to N complex multiplications. At the complementary cumulative distribution function of 10-2, a reduction of 10 dB and 7.5 dB for the peak-to-average power ratio (PAPR) of the I-SC-FDM is achieved than that of orthogonal frequency-division multiplexing modulated with QPSK and 16QAM, respectively, when the subcarrier number is set to 4096. We experimentally demonstrate the I-SC-FDM scheme for optical interconnects with data rates of 12 Gbit/s, 24 Gbit/s and 128 Gbit/s transmitted over 22.5-km, 22.5-km and 2.4-km standard single mode fiber, respectively. The I-SC-FDM scheme shows great potential for cost-sensitive and power-sensitive optical interconnects owing to its low computational complexity and low PAPR.

  13. Enhanced Next Generation Millimeter-Wave Multicarrier System with Generalized Frequency Division Multiplexing

    Directory of Open Access Journals (Sweden)

    Hidekazu Shimodaira

    2016-01-01

    Full Text Available Orthogonal Frequency Division Multiplexing (OFDM is a popular multicarrier technique used to attain high spectral efficiencies. It also has other advantages such as multipath tolerance and ease of implementation. However, OFDM based systems suffer from high Peak-to-Average Power Ratio (PAPR problem. Because of the nonlinearity of the power amplifiers, the high PAPR causes significant distortion in the transmitted signal for millimeter-wave (mmWave systems. To alleviate the high PAPR problem, this paper utilizes Generalized Frequency Division Multiplexing (GFDM which can achieve high spectral efficiency as well as low PAPR. In this paper, we show the performance of GFDM using the IEEE 802.11ad multicarrier frame structures. IEEE 802.11ad is considered one of the most successful industry standards utilizing unlicensed mmWave frequency band. In addition, this paper indicates the feasibility of using GFDM for the future standards such as IEEE 802.11ay. This paper studies the performance improvements in terms of PAPR reduction for GFDM. Based on the performance results, the optimal numbers of subcarriers and subsymbols are calculated for PAPR reduction while minimizing the Bit Error Rate (BER performance degradation. Moreover, transmitter side ICI (Intercarrier Interference reduction is introduced to reduce the receiver load.

  14. Super-channel oriented routing, spectrum and core assignment under crosstalk limit in spatial division multiplexing elastic optical networks

    Science.gov (United States)

    Zhao, Yongli; Zhu, Ye; Wang, Chunhui; Yu, Xiaosong; Liu, Chuan; Liu, Binglin; Zhang, Jie

    2017-07-01

    With the capacity increasing in optical networks enabled by spatial division multiplexing (SDM) technology, spatial division multiplexing elastic optical networks (SDM-EONs) attract much attention from both academic and industry. Super-channel is an important type of service provisioning in SDM-EONs. This paper focuses on the issue of super-channel construction in SDM-EONs. Mixed super-channel oriented routing, spectrum and core assignment (MS-RSCA) algorithm is proposed in SDM-EONs considering inter-core crosstalk. Simulation results show that MS-RSCA can improve spectrum resource utilization and reduce blocking probability significantly compared with the baseline RSCA algorithms.

  15. NG-PON2 Architecture Enabled by Heterogeneous Space Division Multiplexing with Distributed Light Source: A Proof-of-Concept Evaluation

    DEFF Research Database (Denmark)

    Asif, Rameez; Imran, Muhammad; Ye, Feihong

    2015-01-01

    We have numerically evaluated the next generation passive optical network stage-2 (NG-PON2) architecture based on heterogeneous space division multiplexing (SDM) and wavelength-division multiplexing (WDM). Error free transmission (BER of 10−9 ) is obtained for all the downstream (DS) and upstream...

  16. Mode division multiplexing coupler of four LP modes based on a five-core microstructured optical fiber

    Science.gov (United States)

    Zhang, Hongwei; Liu, Yange; Wang, Zhi; Han, Ya; Yang, Kang; Yu, Jie

    2018-03-01

    An all-fiber mode division multiplexing coupler based on a five-core microstructured optical fiber is proposed to multiplex or demultiplex LP11, LP21, LP02 and LP01 modes simultaneously. The five-core microstructured optical fiber is composed of a few mode core supporting the four LP modes propagating at 1550 nm and four single-mode cores surrounding the few-mode core. The coupling mechanism between LP01 mode in each single-mode core and the corresponding four LP modes in the few-mode core is based on avoid-crossing effect. Numerical simulation results show that coupling bandwidths of LP11, LP21, LP02 and LP01 mode are 115 nm, 56 nm, 30 nm, 46 nm respectively, with a coupling length of 2156.1 μm. The proposed mode division multiplexing coupler can multiplex or demultiplex four LP modes simultaneously with large operation bandwidth, making it a good candidate for space-division multiplexing system.

  17. Frequency-domain-independent vector analysis for mode-division multiplexed transmission

    Science.gov (United States)

    Liu, Yunhe; Hu, Guijun; Li, Jiao

    2018-04-01

    In this paper, we propose a demultiplexing method based on frequency-domain independent vector analysis (FD-IVA) algorithm for mode-division multiplexing (MDM) system. FD-IVA extends frequency-domain independent component analysis (FD-ICA) from unitary variable to multivariate variables, and provides an efficient method to eliminate the permutation ambiguity. In order to verify the performance of FD-IVA algorithm, a 6 ×6 MDM system is simulated. The simulation results show that the FD-IVA algorithm has basically the same bit-error-rate(BER) performance with the FD-ICA algorithm and frequency-domain least mean squares (FD-LMS) algorithm. Meanwhile, the convergence speed of FD-IVA algorithm is the same as that of FD-ICA. However, compared with the FD-ICA and the FD-LMS, the FD-IVA has an obviously lower computational complexity.

  18. Development of authentication code for multi-access optical code division multiplexing based quantum key distribution

    Science.gov (United States)

    Taiwo, Ambali; Alnassar, Ghusoon; Bakar, M. H. Abu; Khir, M. F. Abdul; Mahdi, Mohd Adzir; Mokhtar, M.

    2018-05-01

    One-weight authentication code for multi-user quantum key distribution (QKD) is proposed. The code is developed for Optical Code Division Multiplexing (OCDMA) based QKD network. A unique address assigned to individual user, coupled with degrading probability of predicting the source of the qubit transmitted in the channel offer excellent secure mechanism against any form of channel attack on OCDMA based QKD network. Flexibility in design as well as ease of modifying the number of users are equally exceptional quality presented by the code in contrast to Optical Orthogonal Code (OOC) earlier implemented for the same purpose. The code was successfully applied to eight simultaneous users at effective key rate of 32 bps over 27 km transmission distance.

  19. Fine-filter method for Raman lidar based on wavelength division multiplexing and fiber Bragg grating.

    Science.gov (United States)

    Wang, Jun; Zheng, Jiao; Lu, Hong; Yan, Qing; Wang, Li; Liu, Jingjing; Hua, Dengxin

    2017-11-01

    Atmospheric temperature is one of the important parameters for the description of the atmospheric state. Most of the detection approaches to atmospheric temperature monitoring are based on rotational Raman scattering for better understanding atmospheric dynamics, thermodynamics, atmospheric transmission, and radiation. In this paper, we present a fine-filter method based on wavelength division multiplexing, incorporating a fiber Bragg grating in the visible spectrum for the rotational Raman scattering spectrum. To achieve high-precision remote sensing, the strong background noise is filtered out by using the secondary cascaded light paths. Detection intensity and the signal-to-noise ratio are improved by increasing the utilization rate of return signal form atmosphere. Passive temperature compensation is employed to reduce the temperature sensitivity of fiber Bragg grating. In addition, the proposed method provides a feasible solution for the filter system with the merits of miniaturization, high anti-interference, and high stability in the space-based platform.

  20. Performance potentials of an optical bus using wavelength-division multiplexing

    Science.gov (United States)

    Ghose, Kanad

    1993-07-01

    Optical fiber busses supporting multiple concurrently usable channels through the use of wavelength division multiplexing can meet the demanding interconnection requirements of high performance multiprocessors. Using a simple analytical model, we establish why global channel access protocols for the WDM channels are inadequate for a WDM optical fiber bus. We propose a simple WDM bus that supports a small number of channels and uses readily available receivers and transmitters with fixed tunings. A simple channel allocation and arbitration strategy allows up to 100 processors to be connected using a single WDM bus with only 5 WDM channels. Simulated performance shows that the bus does not become a bottleneck even when 100 processors are connected. The WDM channels also allow cache coherence and processor synchronization to be easily supported, making the bus feature- compatible with the IEEE Futurebus+ and SCI standards.

  1. Optical power allocation for adaptive transmissions in wavelength-division multiplexing free space optical networks

    Directory of Open Access Journals (Sweden)

    Hui Zhou

    2015-08-01

    Full Text Available Attracting increasing attention in recent years, the Free Space Optics (FSO technology has been recognized as a cost-effective wireless access technology for multi-Gigabit rate wireless networks. Radio on Free Space Optics (RoFSO provides a new approach to support various bandwidth-intensive wireless services in an optical wireless link. In an RoFSO system using wavelength-division multiplexing (WDM, it is possible to concurrently transmit multiple data streams consisting of various wireless services at very high rate. In this paper, we investigate the problem of optical power allocation under power budget and eye safety constraints for adaptive WDM transmission in RoFSO networks. We develop power allocation schemes for adaptive WDM transmissions to combat the effect of weather turbulence on RoFSO links. Simulation results show that WDM RoFSO can support high data rates even over long distance or under bad weather conditions with an adequate system design.

  2. Channel impulse response equalization scheme based on particle swarm optimization algorithm in mode division multiplexing

    Science.gov (United States)

    Yasear, Shaymah; Amphawan, Angela

    2017-11-01

    Mode division multiplexing (MDM) technique has been introduced as a promising solution to the rapid increase of data traffic. However, although MDM has the potential to increase transmission capacity and significantly reduce the cost and complexity of parallel systems, it also has its challenges. Along the optical fibre link, the deficient characteristics always exist. These characteristics, damage the orthogonality of the modes and lead to mode coupling, causing Inter-symbol interference (SI) which limit the capacity of MDM system. In order to mitigate the effects of mode coupling, an adaptive equalization scheme based on particle swarm optimization (PSO) algorithm has been proposed. Compared to other traditional algorithms that have been used in the equalization process on the MDM system such as least mean square (LMS) and recursive least squares (RLS) algorithms, simulation results demonstrate that the PSO algorithm has flexibility and higher convergence speed for mitigating the effects of nonlinear mode coupling.

  3. Design of 50 G nonpolarizing dense wavelength division multiplexer angle-tuning bandpass filter.

    Science.gov (United States)

    Chen, Xianming; Ma, Junxian; Yang, Yatao

    2010-10-01

    Transmission characteristic differences of a narrow bandpass filter between p- and s-polarized light, especially the central wavelength separation, will corrupt the performance of the filter when the incidence is oblique. In this paper, by adding high-index materials asymmetrically to both sides of a low-index spacer, which tunes the equivalent index of the spacer, the central wavelengths of the two polarizations coincide perfectly when in 20° incidence; with different reflected layers on the two sides of the spacers and replacing some reflected layers with equivalent layers, the 0.5 dB normalized passband width is kept at 0.2 nm, which meets the requirement of the 50 G dense wavelength division multiplexer filter.

  4. Semiconductor optical amplifiers and Raman amplification for 1310-nm dense wavelength division multiplexed transmission

    Science.gov (United States)

    Mazurek, Paweł; Czyżak, Paweł; de Waardt, Huug; Turkiewicz, Jarosław Piotr

    2015-11-01

    We investigate the utilization of semiconductor optical amplifiers (SOAs) and quantum-dot laser-based Raman amplifiers in high-capacity dense wavelength division multiplexed (DWDM) 1310-nm transmission systems. Performed simulations showed that in a 10×40 Gbit/s system, the utilization of a single Raman amplifier in a back-propagation scheme can extend the maximum error-free (bit error rate power budget. Moreover, lower input optical power in a system utilizing a Raman amplifier reduces the four-wave mixing interactions. The obtained results prove that Raman amplification can be successfully applied in 1310-nm high-capacity transmission systems, e.g., to extend the reach of 400G and 1T Ethernet systems.

  5. Snapping shrimp noise mitigation based on statistical detection in underwater acoustic orthogonal frequency division multiplexing systems

    Science.gov (United States)

    Kim, Hyeonsu; Seo, Jongpil; Ahn, Jongmin; Chung, Jaehak

    2017-07-01

    We propose a mitigation scheme for snapping shrimp noise when it corrupts an orthogonal frequency division multiplexing (OFDM) signal in underwater acoustic communication systems. The OFDM signal distorted by the snapping shrimp noise is filtered by a band-stop filter. The snapping shrimp noises in the filtered signal are detected by a detector with a constant false alarm rate whose threshold is derived theoretically from the statistics of the background noise. The detected signals are reconstructed by a simple reconstruction method. The proposed scheme has a higher detection capability and a lower mean square error of the channel estimation for simulated data and a lower bit error rate for practical ocean OFDM data collected in northern East China Sea than the conventional noise-mitigating methods.

  6. Filter multiplexing by use of spatial Code Division Multiple Access approach.

    Science.gov (United States)

    Solomon, Jonathan; Zalevsky, Zeev; Mendlovic, David; Monreal, Javier Garcia

    2003-02-10

    The increasing popularity of optical communication has also brought a demand for a broader bandwidth. The trend, naturally, was to implement methods from traditional electronic communication. One of the most effective traditional methods is Code Division Multiple Access. In this research, we suggest the use of this approach for spatial coding applied to images. The approach is to multiplex several filters into one plane while keeping their mutual orthogonality. It is shown that if the filters are limited by their bandwidth, the output of all the filters can be sampled in the original image resolution and fully recovered through an all-optical setup. The theoretical analysis of such a setup is verified in an experimental demonstration.

  7. The ASCI Network for SC '98: Dense Wave Division Multiplexing for Distributed and Distance Computing

    Energy Technology Data Exchange (ETDEWEB)

    Adams, R.L.; Butman, W.; Martinez, L.G.; Pratt, T.J.; Vahle, M.O.

    1999-06-01

    This document highlights the DISCOM's Distance computing and communication team activities at the 1998 Supercomputing conference in Orlando, Florida. This conference is sponsored by the IEEE and ACM. Sandia National Laboratories, Lawrence Livermore National Laboratory, and Los Alamos National Laboratory have participated in this conference for ten years. For the last three years, the three laboratories have a joint booth at the conference under the DOE's ASCI, Accelerated Strategic Computing Initiatives. The DISCOM communication team uses the forum to demonstrate and focus communications and networking developments. At SC '98, DISCOM demonstrated the capabilities of Dense Wave Division Multiplexing. We exhibited an OC48 ATM encryptor. We also coordinated the other networking activities within the booth. This paper documents those accomplishments, discusses the details of their implementation, and describes how these demonstrations support overall strategies in ATM networking.

  8. Quasidistributed temperature sensor based on dense wavelength-division multiplexing optical fiber delay

    Science.gov (United States)

    Su, Jun; Yang, Ning; Fan, Zhiqiang; Qiu, Qi

    2017-10-01

    We report on a fiber-optic delay-based quasidistributed temperature sensor with high precision. The device works by detecting the delay induced by the temperature instead of the spectrum. To analyze the working principle of this sensor, the thermal dependence of the fiber-optic delay was theoretically investigated and the delay-temperature coefficient was measured to be 42.2 ps/km°C. In this sensor, quasidistributed measurement of temperature could be easily realized by dense wavelength-division multiplexing and wavelength addressing. We built and tested a prototype quasidistributed temperature sensor with eight testing points equally distributed along a 32.61-km-long fiber. The experimental results demonstrate an average error of economic temperature measurements.

  9. Optical wireless communication using positive real-valued orthogonal frequency-division multiplexing and optical beamforming

    Science.gov (United States)

    Kim, Sung-Man; Kwon, Ki-Keun

    2017-07-01

    The relatively unsatisfactory performance of optical wireless communication (OWC) with respect to WiFi and millimeter-wave communications has formed a key issue preventing its commercialization. We experimentally demonstrate an OWC technology using a combination of positive real-valued orthogonal frequency-division multiplexing (OFDM) and optical beamforming (OB). Due to the intensity-modulation and direct-detection aspects of OWC systems, a positive real-valued OFDM signal can be suitably utilized to maximize the OWC data rate. Further, the OB technique, which can focus laser light on a desired target, can be utilized to increase the OWC data rate and transmission distance. Our experimental results show that the received optical signal power and electrical signal increase by up to 42 and 25 dB, respectively. Further, the data rate increases by a factor of 200 with OB over the conventional approach.

  10. Feasibility of quantum key distribution through a dense wavelength division multiplexing network

    Energy Technology Data Exchange (ETDEWEB)

    Qi Bing; Qian Li; Lo, Hoi-Kwong [Center for Quantum Information and Quantum Control, University of Toronto, Toronto, ON (Canada); Zhu Wen, E-mail: bqi@physics.utoronto.c [Department of Electrical and Computer Engineering, University of Toronto, Toronto, ON (Canada)

    2010-10-15

    In this paper, we study the feasibility of conducting quantum key distribution (QKD) together with classical communication through the same optical fiber by employing dense-wavelength-division-multiplexing (DWDM) technology at telecom wavelength. The impact of classical channels on the quantum channel has been investigated for both QKD based on single-photon detection and QKD based on homodyne detection. Our studies show that the latter can tolerate a much higher level of contamination from classical channels than the former. This is because the local oscillator used in the homodyne detector acts as a 'mode selector', which can suppress noise photons effectively. We have performed simulations based on both the decoy BB84 QKD protocol and the Gaussian-modulated coherent state (GMCS) QKD protocol. While the former cannot tolerate even one classical channel (with a power of 0 dBm), the latter can be multiplexed with 38 classical channels (0 dBm power per channel) and still has a secure distance around 10 km. A preliminary experiment has been conducted based on a 100 MHz bandwidth homodyne detector.

  11. Effect of soil temperature on optical frequency transfer through unidirectional dense-wavelength-division-multiplexing fiber-optic links

    NARCIS (Netherlands)

    Pinkert, T.J.; Boll, O.; Willmann, L.; Jansen, G.S.M.; Dijck, E.A.; Groeneveld, B.G.H.M.; Smets, R.; Bosveld, F.C.; Ubachs, W.M.G.; Jungmann, K.; Eikema, K.S.E.; Koelemeij, J.C.J.

    2015-01-01

    Results of optical frequency transfer over a carrier-grade dense-wavelength-division-multiplexing (DWDM) optical fiber network are presented. The relation between soil temperature changes on a buried optical fiber and frequency changes of an optical carrier through the fiber is modeled. Soil

  12. Numerical analysis of intermodal delay in few-mode fibers for mode division multiplexing in optical fiber communication systems

    Science.gov (United States)

    Munir, Abid; Xin, Xiang-jun; Liu, Bo; Latif, Abdul; Hussain, Aftab; Niazi, Shahab Ahmad

    2012-03-01

    In order to achieve higher spectral efficiency, mode division multiplexing (MDM) in few-mode fibers is a new research area. The idea faces lots of technical issues including intermodal delay and mode coupling which limit the achievable length of the system. This paper is designated to complete the analysis of intermodal delay in step-index few-mode fibers. We analyze numerically all the parameters of fiber, which could impact intermodal delay in few-mode fibers and identify the conditions which can increase the number of multiplex modes without significant increase in maximum intermodal delay.

  13. Impact of radar systematic error on the orthogonal frequency division multiplexing chirp waveform orthogonality

    Science.gov (United States)

    Wang, Jie; Liang, Xingdong; Chen, Longyong; Ding, Chibiao

    2015-01-01

    Orthogonal frequency division multiplexing (OFDM) chirp waveform, which is composed of two successive identical linear frequency modulated subpulses, is a newly proposed orthogonal waveform scheme for multiinput multioutput synthetic aperture radar (SAR) systems. However, according to the waveform model, radar systematic error, which introduces phase or amplitude difference between the subpulses of the OFDM waveform, significantly degrades the orthogonality. The impact of radar systematic error on the waveform orthogonality is mainly caused by the systematic nonlinearity rather than the thermal noise or the frequency-dependent systematic error. Due to the influence of the causal filters, the first subpulse leaks into the second one. The leaked signal interacts with the second subpulse in the nonlinear components of the transmitter. This interaction renders a dramatic phase distortion in the beginning of the second subpulse. The resultant distortion, which leads to a phase difference between the subpulses, seriously damages the waveform's orthogonality. The impact of radar systematic error on the waveform orthogonality is addressed. Moreover, the impact of the systematic nonlinearity on the waveform is avoided by adding a standby between the subpulses. Theoretical analysis is validated by practical experiments based on a C-band SAR system.

  14. Channel estimation in few mode fiber mode division multiplexing transmission system

    Science.gov (United States)

    Hei, Yongqiang; Li, Li; Li, Wentao; Li, Xiaohui; Shi, Guangming

    2018-03-01

    It is abundantly clear that obtaining the channel state information (CSI) is of great importance for the equalization and detection in coherence receivers. However, to the best of the authors' knowledge, in most of the existing literatures, CSI is assumed to be perfectly known at the receiver. So far, few literature discusses the effects of imperfect CSI on MDM system performance caused by channel estimation. Motivated by that, in this paper, the channel estimation in few mode fiber (FMF) mode division multiplexing (MDM) system is investigated, in which two classical channel estimation methods, i.e., least square (LS) method and minimum mean square error (MMSE) method, are discussed with the assumption of the spatially white noise lumped at the receiver side of MDM system. Both the capacity and BER performance of MDM system affected by mode-dependent gain or loss (MDL) with different channel estimation errors have been studied. Simulation results show that the capacity and BER performance can be further deteriorated in MDM system by the channel estimation, and an 1e-3 variance of channel estimation error is acceptable in MDM system with 0-6 dB MDL values.

  15. An order of magnitude improvement in optical fiber bandwidth using spatial domain multiplexing/space division multiplexing (SDM) in conjunction with orbital angular momentum (OAM)

    Science.gov (United States)

    Murshid, Syed; Alanzi, Saud; Hridoy, Arnob; Lovell, Greg; Parhar, Gurinder; Chakravarty, Abhijit; Chowdhury, Bilas

    2014-09-01

    Spatial Domain Multiplexing/Space Division Multiplexing (SDM) can increase the bandwidth of existing and futuristic optical fibers by an order of magnitude or more. In the SDM technique, we launch multiple single mode pigtail laser sources of same wavelength into a carrier fiber at different angles. The launching angles decide the output of the carrier fiber by allocating separate spatial locations for each channel. Each channel follows a helical trajectory while traversing the length of the carrier fiber, thereby allowing spatial reuse of optical frequencies. In this endeavor we launch light from five different single mode pigtail laser sources at different angles (with respect to the axis of the carrier fiber) into the carrier fiber. Owing to helical propagation we get five distinct concentric donut shaped rings with negligible crosstalk at the output end of the fiber. These SDM channels also exhibit Orbital Angular Momentum (OAM), thereby adding an extra degree of photon freedom. We present the experimental data of five spatially multiplexed channels and compare them with simulated results to show that this technique can potentially improve the data capacity of optical fibers by an order of magnitude: A factor of five using SDM and another factor of two using OAM.

  16. Short-range remote spectral sensor using mid-infrared semiconductor lasers with orthogonal code-division multiplexing approach

    Science.gov (United States)

    Morbi, Zulfikar; Ho, D. B.; Ren, H.-W.; Le, Han Q.; Pei, Shin Shem

    2002-09-01

    Demonstration of short-range multispectral remote sensing, using 3 to 4-micrometers mid- infrared Sb semiconductor lasers based on code-division multiplexing (CDM) architecture, is described. The system is built on a principle similar to intensity- modulated/direct-detection optical-CDMA for communications, but adapted for sensing with synchronous, orthogonal codes to distinguish different wavelength channels with zero interchannel correlation. The concept is scalable for any number of channels, and experiments with a two-wavelength system are conducted. The CDM-signal processing yielded a white-Gaussian-like system noise that is found to be near the theoretical level limited by the detector fundamental intrinsic noise. With sub-mW transmitter average power, the system was able to detect an open-air acetylene gas leak of 10-2 STP ft3/hr from 10-m away with time-varying, random, noncooperative backscatters. A similar experiment detected and positively distinguished hydrocarbon oil contaminants on water from bio-organic oils and detergents. Projection for more advanced systems suggests a multi-kilometer-range capability for watt-level transmitters, and hundreds of wavelength channels can also be accommodated for active hyperspectral remote sensing application.

  17. Compressive sensing-based channel bandwidth improvement in optical wireless orthogonal frequency division multiplexing link using visible light emitting diode.

    Science.gov (United States)

    Won, Yong-Yuk; Yoon, Sang Min

    2014-08-25

    A new technique, which can compensate for the lack of channel bandwidth in an optical wireless orthogonal frequency division multiplexing (OFDM) link based on a light emitting diode (LED), is proposed. It uses an adaptive sampling and an inverse discrete cosine transform in order to convert an OFDM signal into a sparse waveform so that not only is the important data obtained efficiently but the redundancy one is removed. In compressive sensing (CS), a sparse signal that is sampled below the Nyquist/Shannon limit can be reconstructed successively with enough measurement. This means that the CS technique can increase the data rate of visible light communication (VLC) systems based on LEDs. It is observed that the data rate of the proposed CS-based VLC-OFDM link can be made 1.7 times greater than a conventional VLC-OFDM link (from 30.72 Mb/s to 51.2 Mb/s). We see that the error vector magnitude (EVM) of the quadrature phase shift keying (QPSK) symbol is 31% (FEC limit: EVM of 32%) at a compression ratio of 40%.

  18. On the Efficient Broadcasting of Heterogeneous Services over Band-Limited Channels: Unequal Power Allocation for Wavelet Packet Division Multiplexing

    Directory of Open Access Journals (Sweden)

    Maurizio Murroni

    2008-01-01

    Full Text Available Multiple transmission of heterogeneous services is a central aspect of broadcasting technology. Often, in this framework, the design of efficient communication systems is complicated by stringent bandwidth constraint. In wavelet packet division multiplexing (WPDM, the message signals are waveform coded onto wavelet packet basis functions. The overlapping nature of such waveforms in both time and frequency allows improving the performance over the commonly used FDM and TDM schemes, while their orthogonality properties permit to extract the message signals by a simple correlator receiver. Furthermore, the scalable structure of WPDM makes it suitable for broadcasting heterogeneous services. This work investigates unequal error protection (UEP of data which exhibit different sensitivities to channel errors to improve the performance of WPDM for transmission over band-limited channels. To cope with bandwidth constraint, an appropriate distribution of power among waveforms is proposed which is driven by the channel error sensitivities of the carried message signals in case of Gaussian noise. We address this problem by means of the genetic algorithms (GAs, which allow flexible suboptimal solution with reduced complexity. The mean square error (MSE between the original and the decoded message, which has a strong correlation with subjective perception, is used as an optimization criterion.

  19. Time-varying multiplex network: Intralayer and interlayer synchronization

    Science.gov (United States)

    Rakshit, Sarbendu; Majhi, Soumen; Bera, Bidesh K.; Sinha, Sudeshna; Ghosh, Dibakar

    2017-12-01

    A large class of engineered and natural systems, ranging from transportation networks to neuronal networks, are best represented by multiplex network architectures, namely a network composed of two or more different layers where the mutual interaction in each layer may differ from other layers. Here we consider a multiplex network where the intralayer coupling interactions are switched stochastically with a characteristic frequency. We explore the intralayer and interlayer synchronization of such a time-varying multiplex network. We find that the analytically derived necessary condition for intralayer and interlayer synchronization, obtained by the master stability function approach, is in excellent agreement with our numerical results. Interestingly, we clearly find that the higher frequency of switching links in the layers enhances both intralayer and interlayer synchrony, yielding larger windows of synchronization. Further, we quantify the resilience of synchronous states against random perturbations, using a global stability measure based on the concept of basin stability, and this reveals that intralayer coupling strength is most crucial for determining both intralayer and interlayer synchrony. Lastly, we investigate the robustness of interlayer synchronization against a progressive demultiplexing of the multiplex structure, and we find that for rapid switching of intralayer links, the interlayer synchronization persists even when a large number of interlayer nodes are disconnected.

  20. Time division multiple access for vehicular communications

    CERN Document Server

    Omar, Hassan Aboubakr

    2014-01-01

    This brief focuses on medium access control (MAC) in vehicular ad hoc networks (VANETs), and presents VeMAC, a novel MAC scheme based on distributed time division multiple access (TDMA) for VANETs. The performance of VeMAC is evaluated via mathematical analysis and computer simulations in comparison with other existing MAC protocols, including the IEEE 802.11p standard. This brief aims at proposing TDMA as a suitable MAC scheme for VANETs, which can support the quality-of-service requirements of high priority VANET applications.

  1. An Improved Model Predictive Current Controller of Switched Reluctance Machines Using Time-Multiplexed Current Sensor.

    Science.gov (United States)

    Li, Bingchu; Ling, Xiao; Huang, Yixiang; Gong, Liang; Liu, Chengliang

    2017-05-17

    This paper presents a fixed-switching-frequency model predictive current controller using multiplexed current sensor for switched reluctance machine (SRM) drives. The converter was modified to distinguish currents from simultaneously excited phases during the sampling period. The only current sensor installed in the converter was time division multiplexing for phase current sampling. During the commutation stage, the control steps of adjacent phases were shifted so that sampling time was staggered. The maximum and minimum duty ratio of pulse width modulation (PWM) was limited to keep enough sampling time for analog-to-digital (A/D) conversion. Current sensor multiplexing was realized without complex adjustment of either driver circuit nor control algorithms, while it helps to reduce the cost and errors introduced in current sampling due to inconsistency between sensors. The proposed controller is validated by both simulation and experimental results with a 1.5 kW three-phase 12/8 SRM. Satisfied current sampling is received with little difference compared with independent phase current sensors for each phase. The proposed controller tracks the reference current profile as accurately as the model predictive current controller with independent phase current sensors, while having minor tracking errors compared with a hysteresis current controller.

  2. Long-haul dense wavelength division multiplexing between a chaotic optical secure channel and a conventional fiber-optic channel.

    Science.gov (United States)

    Zhao, Qingchun; Yin, Hongxi; Chen, Xiaolei

    2012-08-01

    The purpose of this paper is to numerically investigate dense wavelength division multiplexing (DWDM) transmission between a chaotic optical secure channel and a conventional fiber-optic channel. A 2.5 Gbits/s secure message masked by the chaotic optical secure channel and a 10 Gbits/s message sequence carried by the conventional fiber-optic channel can be realized simultaneously when the channel spacing is 0.8 nm. The results show that the Q-factors of the recovered messages can be increased significantly when the launched optical power is reduced appropriately. The deterioration of the quality of communication caused by fiber dispersion can be compensated noticeably on the condition that the symmetrical dispersion compensation scheme is adopted. In addition, the secure message is masked by chaos shift keying in the chaotic optical secure channel. The multiplexing distance between the chaotic optical secure channel and the conventional fiber-optic channel is up to 500 km.

  3. Ultra fast quantum key distribution over a 97 km installed telecom fiber with wavelength division multiplexing clock synchronization.

    Science.gov (United States)

    Tanaka, Akihiro; Fujiwara, Mikio; Nam, Sae W; Nambu, Yoshihiro; Takahashi, Seigo; Maeda, Wakako; Yoshino, Ken-ichiro; Miki, Shigehito; Baek, Burm; Wang, Zhen; Tajima, Akio; Sasaki, Masahide; Tomita, Akihisa

    2008-07-21

    We demonstrated ultra fast BB84 quantum key distribution (QKD) transmission at 625 MHz clock rate through a 97 km field-installed fiber using practical clock synchronization based on wavelength-division multiplexing (WDM). We succeeded in over-one-hour stable key generation at a high sifted key rate of 2.4 kbps and a low quantum bit error rate (QBER) of 2.9%. The asymptotic secure key rate was estimated to be 0.78- 0.82 kbps from the transmission data with the decoy method of average photon numbers 0, 0.15, and 0.4 photons/pulse.

  4. N-rich silicon nitride angled MMI for coarse wavelength division (de)multiplexing in the O-band.

    Science.gov (United States)

    Bucio, Thalía Domínguez; Khokhar, Ali Z; Mashanovich, Goran Z; Gardes, Frederic Y

    2018-03-15

    We report the design and fabrication of a compact angled multimode interferometer (AMMI) on a 600 nm thick N-rich silicon nitride platform (n=1.92) optimized to match the International Telecommunication Union coarse wavelength division (de)multiplexing standard in the O telecommunication band. The demonstrated device exhibited a good spectral response with Δλ=20  nm, BW 3 dB ∼11  nm, ILprocess that enables multilayer integration schemes due to its processing temperature <400°C.

  5. Free-space optics mode-wavelength division multiplexing system using LG modes based on decision feedback equalization

    Directory of Open Access Journals (Sweden)

    Amphawan Angela

    2017-01-01

    Full Text Available A free-space optics mode-wavelength division multiplexing (MWDM system using Laguerre-Gaussian (LG modes is designed using decision feedback equalization for controlling mode coupling and combating inter symbol interference so as to increase channel diversity. In this paper, a data rate of 24 Gbps is achieved for a FSO MWDM channel of 2.6 km in length using feedback equalization. Simulation results show significant improvement in eye diagrams and bit-error rates before and after decision feedback equalization.

  6. Increasing the frequency response of direct-detection phase-sensitive OTDR by using frequency division multiplexing

    Science.gov (United States)

    Yang, Guangyao; Fan, Xinyu; Liu, Qingwen; He, Zuyuan

    2017-04-01

    The frequency division multiplexing (FDM) technique is firstly introduced into a direct-detection phase-sensitive OTDR to improve the distributed fiber acoustic sensing performance by using a frequency step sweeping laser source and a dual probe pulse scheme. By using FDM technique, a 40 kHz sampling rate to vibration is realized with a 10 km measurement range, which implies the tradeoff between the frequency response and the measurement range is broken. In experiment, a 6 kHz vibration is successfully measured.

  7. 1.114-gb/s time/space division switch system

    Science.gov (United States)

    Pawelski, Robert L.; Nordin, Ronald A.; Huisman, R. F.; Kelly, S.; Payne, William A.; Veach, R. S.

    1990-10-01

    Advanced digital communication services11 such as Broadband ISDN High Definition Television (HDTV) and enhanced data networking are expected to require high bandwidth and fast reconfiguration time switching centers available in the 1990''s. Digital GaAs IC''s can allow the implementation of these switching centers providing these services efficiently and at a low cost. The low cost arises from the reduction in hardware power maintenance etc. when the switch is designed to operate at the incoming data rate instead of at a lower rate. In order to utilize the capacity of a high bandwidth data link time division multiplexing is employed. This is a technique where multiple digital signals are interleaved (bit byte or block) on one data link. Clearly it is advantageous to have a switch that not only has a large bandwidth but can reconfigure at the data rate so as to provide bit byte or block switching functions thus being compatible with many different transmission formats. We present an experimental Time/Space Division Switch System capable of operating at over 1 Gb/s. Both custom and commercial Gallium Arsenide (GaAs) devices are used in the design of the various system functional blocks. These functional blocks include a Time Slot Interchanger (TSI) Time Multiplexed Switch (TMS) TMS Controller Multiplexer and Demultiplexers. In addition to the system overview we discuss such issues as printed circuit board microwave interconnections and CAD tools for high speed

  8. Simultaneous generation of wavelength division multiplexing PON and RoF signals using a hybrid mode-locked laser

    Science.gov (United States)

    Aldaya, Ivan; Campuzano, Gabriel; Castañón, Gerardo

    2015-06-01

    The use of millimeter-wave (mm-wave) frequencies has been proposed to overcome the imminent saturation of the ultra high frequency band, justifying research on radio over fiber (RoF) networks as an inexpensive and green solution to distribute multi-Gbps signals. Coincidently, telecommunication operators are investing a significant effort to deploy their passive optical network (PON) infrastructure closer to the users. In this work, we present a novel cost-efficient architecture based on a hybrid mode locked laser capable to simultaneously generate up-to 5 wavelength division multiplexing PON and RoF channels, being compatible with the 50-GHz ITU frequency grid. We analyze the limits of operation of our proposed architecture considering the high modal relative intensity noise induced by mode partition noise, as well as fiber impairments, such as chromatic dispersion and nonlinearities. The feasibility of generation and transmission of 5×10-Gbps PON and 5×5-Gbps RoF using orthogonal frequency division multiplexing up to 50 km has been demonstrated through realistic numerical simulations.

  9. Algorithm for extracting multiple object waves without Fourier transform from a single image recorded by spatial frequency-division multiplexing and its application to digital holography

    Science.gov (United States)

    Tahara, Tatsuki; Akamatsu, Takanori; Arai, Yasuhiko; Shimobaba, Tomoyoshi; Ito, Tomoyoshi; Kakue, Takashi

    2017-11-01

    We propose a novel algorithm that does not require any Fourier transform to extract multiple object waves in a single image recorded with spatial frequency-division multiplexing. Smoothing is utilized to extract the desired object-wave information from a spatially multiplexed image. Numerical and experimental results show its validity and applicability for image and Fresnel digital holography. Our investigations clarify the speeding up of both the object-wave extractions and multiple object-image reconstructions quantitatively.

  10. Experimental Demonstration of 6-Mode Division Multiplexed NG-PON2: Cost Effective 40 Gbit/s/Spatial-Mode Access Based on 3D Laser Inscribed Photonic Lanterns

    DEFF Research Database (Denmark)

    Asif, Rameez; Hu, Hao; Mitchell, Paul

    We report the first space-division-multiplexed based symmetric NG-PON2 network by effi- ciently transmitting 40 Gbit/s/spatial-mode. Error free transmission (BER of 10−9 ) is obtained for all the downstream and upstream data tributaries over 1-km 6-spatial-mode FMF without using MIMO DSP......We report the first space-division-multiplexed based symmetric NG-PON2 network by effi- ciently transmitting 40 Gbit/s/spatial-mode. Error free transmission (BER of 10−9 ) is obtained for all the downstream and upstream data tributaries over 1-km 6-spatial-mode FMF without using MIMO DSP...

  11. Physical-layer energy-efficient receiving method based on selective sampling in orthogonal frequency division multiplexing access passive optical network

    Science.gov (United States)

    Li, Jun; He, Hao; Bi, Meihua; Hu, Weisheng

    2014-05-01

    We propose a physical-layer energy-efficient receiving method based on selective sampling in an orthogonal frequency division multiplexing access passive optical network (OFDMA-PON). By using the special designed frame head, the receiver within an optical network unit (ONU) can identify the destination of the incoming frame. The receiver only samples at the time when the destination is in agreement with the ONU, while it stays in standby during the rest of the time. We clarify its feasibility through an experiment and analyze the downstream traffic delay by simulation. The results indicate that under limited delay conditions, ˜60% energy can be saved compared with the traditional receiving method in the OFDMA-PON system with 512 ONUs.

  12. Telemetry Standards, RCC Standard 106-17. Chapter 3. Frequency Division Multiplexing Telemetry Standards

    Science.gov (United States)

    2017-07-01

    reference signal may be used as a detranslation frequency in a constant-bandwidth format. If the reference signal is recorded on a separate tape track...characteristics such as amplitude and phase nonlinearities of the transmitter, receiver, magnetic tape recorder /reproducer, or other system components...Telemetry Standards, RCC Standard 106-17 Chapter 3, July 2017 A-4 The use of magnetic tape recorders for recording a subcarrier multiplex may degrade the

  13. Demonstration of the MEMS Digital Micromirror Device-Based Broadband Reconfigurable Optical Add Drop Filter for Dense Wavelength-Division-Multiplexing Systems

    Science.gov (United States)

    Khan, Sajjad A.; Riza, Nabeel A.

    2007-02-01

    For the first time, an optimized optical add drop filter (OADF) for dense wavelength-division-multiplexing systems is demonstrated using the Texas Instruments microelectro-mechanical-system Digital Micromirror Device (DMD™). This OADF features a polarization-insensitive fault-tolerant broadband operation, low loss, and the ability to selectively add/drop with high-wavelength-resolution multiple channels in the C telecommunications band. The proof-of-concept OADF designed for the C-band demonstrates low insertion loss, 0.15-dB polarization dependent loss, 3-dB wavelength resolution of 0.4 nm, and an average crosstalk of better than 30 dB. With the use of a reference mirror, the OADF becomes a multiwavelength 2 x 2 routing switch.

  14. Fully Integrated, Multiport, Planar-Waveguide, Spectral Comparators and Multiplexers Based on Lithographic Holography

    National Research Council Canada - National Science Library

    Mossberg, Thomas; Greiner, Christoph

    2005-01-01

    .... for the first time the successful application of HBRs to wavelength division multiplexing. Measured device performance indicates that the photolithographic fabrication process has reduced multiplexer designs to practice essentially perfectly...

  15. A robust and scalable neuromorphic communication system by combining synaptic time multiplexing and MIMO-OFDM.

    Science.gov (United States)

    Srinivasa, Narayan; Zhang, Deying; Grigorian, Beayna

    2014-03-01

    This paper describes a novel architecture for enabling robust and efficient neuromorphic communication. The architecture combines two concepts: 1) synaptic time multiplexing (STM) that trades space for speed of processing to create an intragroup communication approach that is firing rate independent and offers more flexibility in connectivity than cross-bar architectures and 2) a wired multiple input multiple output (MIMO) communication with orthogonal frequency division multiplexing (OFDM) techniques to enable a robust and efficient intergroup communication for neuromorphic systems. The MIMO-OFDM concept for the proposed architecture was analyzed by simulating large-scale spiking neural network architecture. Analysis shows that the neuromorphic system with MIMO-OFDM exhibits robust and efficient communication while operating in real time with a high bit rate. Through combining STM with MIMO-OFDM techniques, the resulting system offers a flexible and scalable connectivity as well as a power and area efficient solution for the implementation of very large-scale spiking neural architectures in hardware.

  16. Large-memory real-time multichannel multiplexed pattern recognition

    Science.gov (United States)

    Gregory, D. A.; Liu, H. K.

    1984-01-01

    The principle and experimental design of a real-time multichannel multiplexed optical pattern recognition system via use of a 25-focus dichromated gelatin holographic lens (hololens) are described. Each of the 25 foci of the hololens may have a storage and matched filtering capability approaching that of a single-lens correlator. If the space-bandwidth product of an input image is limited, as is true in most practical cases, the 25-focus hololens system has 25 times the capability of a single lens. Experimental results have shown that the interfilter noise is not serious. The system has already demonstrated the storage and recognition of over 70 matched filters - which is a larger capacity than any optical pattern recognition system reported to date.

  17. Effect of soil temperature on optical frequency transfer through unidirectional dense-wavelength-division-multiplexing fiber-optic links.

    Science.gov (United States)

    Pinkert, T J; Böll, O; Willmann, L; Jansen, G S M; Dijck, E A; Groeneveld, B G H M; Smets, R; Bosveld, F C; Ubachs, W; Jungmann, K; Eikema, K S E; Koelemeij, J C J

    2015-02-01

    Results of optical frequency transfer over a carrier-grade dense-wavelength-division-multiplexing (DWDM) optical fiber network are presented. The relation between soil temperature changes on a buried optical fiber and frequency changes of an optical carrier through the fiber is modeled. Soil temperatures, measured at various depths by the Royal Netherlands Meteorology Institute (KNMI) are compared with observed frequency variations through this model. A comparison of a nine-day record of optical frequency measurements through the 2×298  km fiber link with soil temperature data shows qualitative agreement. A soil temperature model is used to predict the link stability over longer periods (days-months-years). We show that optical frequency dissemination is sufficiently stable to distribute and compare, e.g., rubidium frequency standards over standard DWDM optical fiber networks using unidirectional fibers.

  18. Photonics-based multi-function analog signal processor based on a polarization division multiplexing Mach-Zehnder modulator.

    Science.gov (United States)

    Zhang, Yamei; Pan, Shilong

    2017-12-01

    A photonics-based multi-function analog signal processor based on an optical polarization division multiplexing dual-parallel Mach-Zehnder modulator is proposed and demonstrated, which can implement simultaneously photonic microwave phase shifting, upconversion/downconversion and filtering with excellent tunability. An experiment is carried out. Downconverted and upconverted phase shifters with phases continuously tuned from -180 to 180 deg over 0-11 and 11-33 GHz are implemented. Based on the frequency-mixed phase shifter, a four-tap microwave photonic filter that has the capability to select a frequency-mixed component is built. The proposed approach features multi-function, scalable independent channels, a wide bandwidth, and high tunability, which can find applications in beamforming networks, radio frequency frontends, and radio over fiber systems.

  19. Influence of monitor passband width on the layer thickness determination during deposition of a dense-wavelength-division-multiplexing filter.

    Science.gov (United States)

    Lee, Cheng-Chung; Kuo, Chien-Cheng; Chen, Sheng-Hui

    2006-03-01

    The monitor passband width of an optical monitor is an important parameter for the fabrication of a dense-wavelength-division-multiplexing (DWDM) filter. The peak insertion loss and transmittance of one-cavity narrow-bandpass filters (NBPFs) were analyzed by using different passband widths. The simulation monitoring curves of the last layer of the first, second, third, and fourth cavities of a five-cavity DWDM filter with different monitor passband widths were investigated. The last layer of each cavity is very sensitive to the monitor passband width, showing that the monitor passband width of an optical monitor should be less than half the designed passband width. This analysis demonstrates the successful fabrication of a five-cavity DWDM filter.

  20. Threshold-Based Multiple Optical Signal Selection Scheme for Free-Space Optical Wavelength Division Multiplexing Systems

    KAUST Repository

    Nam, Sung Sik

    2017-11-13

    We propose a threshold-based multiple optical signal selection scheme (TMOS) for free-space optical wavelength division multiplexing systems. With this scheme, we can obtain higher spectral efficiency while reducing the possible complexity of implementation caused by the beam-selection scheme and without a considerable performance loss. To characterize the performance of our scheme, we statistically analyze the operation characteristics under conventional detection conditions (i.e., heterodyne detection and intensity modulation/direct detection techniques) with log-normal turbulence while taking into consideration the impact of pointing error. More specifically, we derive exact closed-form expressions for the outage probability, the average bit error rate, and the average spectral efficiency while adopting an adaptive modulation. Some selected results show that TMOS increases the average spectral efficiency while maintaining a minimum average bit error rate requirement.

  1. High-speed millimeter communication through radio-over-free-space-optics network by mode-division multiplexing

    Science.gov (United States)

    Chaudhary, Sushank; Amphawan, Angela

    2017-11-01

    In an attempt to meet the goal of distributing millimeter-wave (mm-wave) signals, recent years have witnessed significant relevance being given to combining radio frequency with optical fiber technologies. The future of radio-over-free-space-optics technology aims to build a universal platform for distributing millimeter waves for wireless local area networks without using expensive optical fibers. This work is focused on simultaneous transmission of four independent OFDM-based channels, each carrying 20 Gbps to 40 GHz data, by mode-division multiplexing of Laguerre-Gaussian mode with vortex lens and Hermite-Gaussian mode to realize a total transmission of 80 Gbps to 160 GHz data over 50-km free-space optical link. Moreover, the performance of the proposed system is also evaluated under the influence of various atmospheric turbulences, such as light fog, thin fog, and thick fog.

  2. Demonstration of 4×100 Gbps discrete multitone transmission using electric absorption modulated laser at 1550-nm for dense wavelength division multiplexing intradata center connect

    Science.gov (United States)

    Xu, Yuming; Yu, Jianjun; Li, Xinying

    2017-03-01

    We experimentally demonstrate 4 lanes up to 400 Gbps discrete multitone transmission using an electric absorption modulated laser (EML) at 1550-nm for dense wavelength division multiplexing (DWDM) intradata center connects. This is the first demonstration of 4×100 Gb/s transmission using EML at 1550-nm, and it is compatible with the DWDM system at C-band.

  3. Long-Haul Dense Space Division Multiplexed Transmission over Low-Crosstalk Heterogeneous 32-Core Transmission Line Using Partial Recirculating Loop System

    DEFF Research Database (Denmark)

    Mizuno, Takayuki; Shibahara, Kohki; Ye, Feihong

    2017-01-01

    In this paper, we present long-haul 32-core dense space division multiplexed (DSDM) unidirectional transmission over a single-mode multicore transmission line. We developed a low-crosstalk heterogeneous 32-core fiber with a square lattice arrangement, and a novel partial recirculating loop system...

  4. Investigation of cascadability of add-drop multiplexers in OTDM systems

    DEFF Research Database (Denmark)

    Jepsen, Kim Stokholm; Poulsen, Henrik Nørskov; Clausen, Anders

    1998-01-01

    The influence of coherent cross-talk on the cascadability of add-drop multiplexers in optical time division multiplexing (OTDM) systems is analysed theoretically using moment generating functions. Calculations are validated by experiments......The influence of coherent cross-talk on the cascadability of add-drop multiplexers in optical time division multiplexing (OTDM) systems is analysed theoretically using moment generating functions. Calculations are validated by experiments...

  5. Novel secure and bandwidth efficient optical code division multiplexed system for future access networks

    Science.gov (United States)

    Singh, Simranjit

    2016-12-01

    In this paper, a spectrally coded optical code division multiple access (OCDMA) system using a hybrid modulation scheme has been investigated. The idea is to propose an effective approach for simultaneous improvement of the system capacity and security. Data formats, NRZ (non-return to zero), DQPSK (differential quadrature phase shift keying), and PoISk (polarisation shift keying) are used to get the orthogonal modulated signal. It is observed that the proposed hybrid modulation provides efficient utilisation of bandwidth, increases the data capacity and enhances the data confidentiality over existing OCDMA systems. Further, the proposed system performance is compared with the current state-of-the-art OCDMA schemes.

  6. Orbital Angular Momentum-based Space Division Multiplexing for High-capacity Underwater Optical Communications

    Science.gov (United States)

    Ren, Yongxiong; Li, Long; Wang, Zhe; Kamali, Seyedeh Mahsa; Arbabi, Ehsan; Arbabi, Amir; Zhao, Zhe; Xie, Guodong; Cao, Yinwen; Ahmed, Nisar; Yan, Yan; Liu, Cong; Willner, Asher J.; Ashrafi, Solyman; Tur, Moshe; Faraon, Andrei; Willner, Alan E.

    2016-09-01

    To increase system capacity of underwater optical communications, we employ the spatial domain to simultaneously transmit multiple orthogonal spatial beams, each carrying an independent data channel. In this paper, we show up to a 40-Gbit/s link by multiplexing and transmitting four green orbital angular momentum (OAM) beams through a single aperture. Moreover, we investigate the degrading effects of scattering/turbidity, water current, and thermal gradient-induced turbulence, and we find that thermal gradients cause the most distortions and turbidity causes the most loss. We show systems results using two different data generation techniques, one at 1064 nm for 10-Gbit/s/beam and one at 520 nm for 1-Gbit/s/beam; we use both techniques since present data-modulation technologies are faster for infrared (IR) than for green. For the 40-Gbit/s link, data is modulated in the IR, and OAM imprinting is performed in the green using a specially-designed metasurface phase mask. For the 4-Gbit/s link, a green laser diode is directly modulated. Finally, we show that inter-channel crosstalk induced by thermal gradients can be mitigated using multi-channel equalisation processing.

  7. Orbital Angular Momentum-based Space Division Multiplexing for High-capacity Underwater Optical Communications

    Science.gov (United States)

    Ren, Yongxiong; Li, Long; Wang, Zhe; Kamali, Seyedeh Mahsa; Arbabi, Ehsan; Arbabi, Amir; Zhao, Zhe; Xie, Guodong; Cao, Yinwen; Ahmed, Nisar; Yan, Yan; Liu, Cong; Willner, Asher J.; Ashrafi, Solyman; Tur, Moshe; Faraon, Andrei; Willner, Alan E.

    2016-01-01

    To increase system capacity of underwater optical communications, we employ the spatial domain to simultaneously transmit multiple orthogonal spatial beams, each carrying an independent data channel. In this paper, we show up to a 40-Gbit/s link by multiplexing and transmitting four green orbital angular momentum (OAM) beams through a single aperture. Moreover, we investigate the degrading effects of scattering/turbidity, water current, and thermal gradient-induced turbulence, and we find that thermal gradients cause the most distortions and turbidity causes the most loss. We show systems results using two different data generation techniques, one at 1064 nm for 10-Gbit/s/beam and one at 520 nm for 1-Gbit/s/beam; we use both techniques since present data-modulation technologies are faster for infrared (IR) than for green. For the 40-Gbit/s link, data is modulated in the IR, and OAM imprinting is performed in the green using a specially-designed metasurface phase mask. For the 4-Gbit/s link, a green laser diode is directly modulated. Finally, we show that inter-channel crosstalk induced by thermal gradients can be mitigated using multi-channel equalisation processing. PMID:27615808

  8. L1 track finding for a time multiplexed trigger

    Energy Technology Data Exchange (ETDEWEB)

    Cieri, D., E-mail: davide.cieri@bristol.ac.uk [University of Bristol, Bristol (United Kingdom); Rutherford Appleton Laboratory, Didcot (United Kingdom); Brooke, J.; Grimes, M. [University of Bristol, Bristol (United Kingdom); Newbold, D. [University of Bristol, Bristol (United Kingdom); Rutherford Appleton Laboratory, Didcot (United Kingdom); Harder, K.; Shepherd-Themistocleous, C.; Tomalin, I. [Rutherford Appleton Laboratory, Didcot (United Kingdom); Vichoudis, P. [CERN, Geneva (Switzerland); Reid, I. [Brunel University, London (United Kingdom); Iles, G.; Hall, G.; James, T.; Pesaresi, M.; Rose, A.; Tapper, A.; Uchida, K. [Imperial College, London (United Kingdom)

    2016-07-11

    At the HL-LHC, proton bunches will cross each other every 25 ns, producing an average of 140 pp-collisions per bunch crossing. To operate in such an environment, the CMS experiment will need a L1 hardware trigger able to identify interesting events within a latency of 12.5 μs. The future L1 trigger will make use also of data coming from the silicon tracker to control the trigger rate. The architecture that will be used in future to process tracker data is still under discussion. One interesting proposal makes use of the Time Multiplexed Trigger concept, already implemented in the CMS calorimeter trigger for the Phase I trigger upgrade. The proposed track finding algorithm is based on the Hough Transform method. The algorithm has been tested using simulated pp-collision data. Results show a very good tracking efficiency. The algorithm will be demonstrated in hardware in the coming months using the MP7, which is a μTCA board with a powerful FPGA capable of handling data rates approaching 1 Tb/s.

  9. L1 Track Finding for a Time Multiplexed Trigger

    CERN Document Server

    AUTHOR|(CDS)2090481; Grimes, M.; Newbold, D.; Harder, K.; Shepherd-Themistocleous, C.; Tomalin, I.; Vichoudis, P.; Reid, I.; Iles, G.; Hall, G.; James, T.; Pesaresi, M.; Rose, A.; Tapper, A.; Uchida, K.

    2016-01-01

    At the HL-LHC, proton bunches will cross each other every 25 ns, producing an average of 140 p p-collisions per bunch crossing. To operate in such an environment, the CMS experiment will need a L1 hardware trigger able to identify interesting events within a latency of 12.5 us. The future L1 trigger will make use also of data coming from the silicon tracker to control the trigger rate. The architecture that will be used in future to process tracker data is still under discussion. One interesting proposal makes use of the Time Multiplexed Trigger concept, already implemented in the CMS calorimeter trigger for the Phase I trigger upgrade. The proposed track finding algorithm is based on the Hough Transform method. The algorithm has been tested using simulated pp-collision data. Results show a very good tracking efficiency. The algorithm will be demonstrated in hardware in the coming months using the MP7, which is a uTCA board with a powerful FPGA capable of handling data rates approaching 1 Tb/s.

  10. Design of DPSS based fiber bragg gratings and their application in all-optical encryption, OCDMA, optical steganography, and orthogonal-division multiplexing.

    Science.gov (United States)

    Djordjevic, Ivan B; Saleh, Alaa H; Küppers, Franko

    2014-05-05

    The future information infrastructure will be affected by limited bandwidth of optical networks, high energy consumption, heterogeneity of network segments, and security issues. As a solution to all problems, we advocate the use of both electrical basis functions (orthogonal prolate spheroidal basis functions) and optical basis functions, implemented as FBGs with orthogonal impulse response in addition to spatial modes. We design the Bragg gratings with orthogonal impulse responses by means of discrete layer peeling algorithm. The target impulse responses belong to the class of discrete prolate spheroidal sequences, which are mutually orthogonal regardless of the sequence order, while occupying the fixed bandwidth. We then design the corresponding encoders and decoders suitable for all-optical encryption, optical CDMA, optical steganography, and orthogonal-division multiplexing (ODM). Finally, we propose the spectral multiplexing-ODM-spatial multiplexing scheme enabling beyond 10 Pb/s serial optical transport networks.

  11. The performance of orthogonal frequency division multiplexing in the weak turbulence regime of free space optics communication systems

    International Nuclear Information System (INIS)

    Selvi, M; Murugesan, K

    2012-01-01

    Radio on free space optics—RoFSO—has gained momentum in research because of its cost effectiveness and efficiency in transferring data at a high rate that is comparable to that for optical fiber media. While the transmission data rate is limited in fiber due to dispersion and nonlinearity, such effects do not prevail in FSO communication links. The data rate depends mainly on the switching speed of the optoelectronic devices. With the characteristics of free space being random in nature, the performance of RoFSO is primarily governed by atmospheric conditions. In this paper, we evaluate the performance of the orthogonal frequency division multiplexing (OFDM) signal in free space and compare against its counterpart radio frequency (RF) wireless communication systems. Simulations have been done on the atmospheric conditions by means of modeling the scintillation effect using log-normal distribution. The performance of the proposed system under two different base-band modulations, namely OFDM–PSK (phase shift keying) and QAM (quadrature amplitude modulation) in weak turbulence conditions is studied. It is found that PSK performs better than QAM. Also the M-ary performance analysis shows that 3–5 dB improvement in the signal to noise ratio is obtained for OFDM based FSO transmission compared to RF based wireless transmission. (paper)

  12. Group-Orthogonal Code-Division Multiplex: A Physical-Layer Enhancement for IEEE 802.11n Networks

    Directory of Open Access Journals (Sweden)

    Felip Riera-Palou

    2010-01-01

    Full Text Available The new standard for wireless local area networks (WLANs, named IEEE 802.11n, has been recently released. This new norm builds upon and remains compatible with the previous WLANs standards IEEE 802.11a/g while it is able to achieve transmission rates of up to 600 Mbps. These increased data rates are mainly a consequence of two important new features: (1 multiple antenna technology at transmission and reception, and (2 optional doubling of the system bandwidth thanks to the availability of an additional 20 MHz band. This paper proposes the use of Group-Orthogonal Code Division Multiplex (GO-CDM as a means to improve the performance of the 802.11n standard by further exploiting the inherent frequency diversity. It is explained why GO-CDM synergistically matches with the two aforementioned new features and the performance gains it can offer under different configurations is illustrated. Furthermore, the effects that group-orthogonal has on key implementation issues such as channel estimation, carrier frequency offset, and peak-to-average power ratio (PAPR are also considered.

  13. Dense wavelength-division multiplexing dispersion compensators based on chirped and apodized Fibonacci structures: CA-FC(j,n).

    Science.gov (United States)

    Golmohammadi, Saeed; Moravvej-Farshi, Mohammad Kazem; Rostami, Ali; Zarifkar, Abbas

    2008-12-10

    Chromatic dispersion compensation is an essential feature of high speed dense wavelength-division multiplexing (DWDM) systems. We propose a dispersion compensator structure whose characteristics meet the optical DWDM system requirements. The proposed structure is based on Fibonacci quasi-periodic multilayer structures composed of layers with large index differences. Studying the dispersive properties of Fibonacci structures with generation numbers j=3 and 4, and calculating group delay (GD) and group velocity dispersion (GVD) of their reflection bands, we have demonstrated that to have a smooth GD and almost a constant GVD in each band of a DWDM system, one needs not only to suitably chirp the structure refractive index profile, but also must properly apodize it. We also demonstrate the possibility of achieving high slope GDs and large GVDs by means of high order Fibonacci structures with thicker layers. Finally, by varying the layer dimensions and refractive indices as well as Fibonacci's order, one can design DWDM dispersion compensators suitable for distances as long as 220 km.

  14. Blind identification of the number of sub-carriers for orthogonal frequency division multiplexing-based elastic optical networking

    Science.gov (United States)

    Zhao, Lei; Xu, Hengying; Bai, Chenglin

    2018-03-01

    In orthogonal frequency division multiplexing (OFDM)-based elastic optical networking (EON), it is imperative to identify unknown parameters of OFDM-based EON signals quickly, intelligently and robustly. Because the number of sub-carriers determines the size of the sub-carriers spacing and then affects the symbol period of the OFDM and the anti-dispersion capability of the system, the identification of the number of sub-carriers has a profound effect on the identification of other key parameters of the system. In this paper, we proposed a method of number identification for sub-carriers of OFDM-based EON signals with help of high-order cyclic cumulant. The specific fourth-order cyclic cumulant exists only at the location of its sub-carriers frequencies. So the identification of the number of sub-carriers can be implemented by detecting the cyclic-frequencies. The proposed scheme in our study can be divided into three sub-stages, i.e. estimating the spectral range, calculating the high-order cyclic cumulant and identifying the number of sub-carriers. When the optical signal-to-noise ratios (OSNR) varied from 16dB to 22dB, the number of sub-carriers (64-512) was successfully identified in the experiment, and from the statistical point of view, the average identification absolute accuracy (IAAs) exceeded 94%.

  15. Performance comparison of pre-, boost-, and inline-multimode erbium-doped fiber amplifier configurations to boost mode-division multiplexed multimode fiber link

    Science.gov (United States)

    Gupta, Rajan; Kaler, Rajinder Singh

    2016-05-01

    The performance of 3×3, 4×4, 5×5, and 6×6 optical multi-input multioutput (MIMO) mode-division multiplexed multimode fiber (MMF) systems has been investigated using pre-, boost-, and inline-multimode erbium-doped fiber amplifier configuration methods with LPlm (linearly polarized) modes. The outcome of these configurations has been compared in terms of quality factor (Q-factor) and bit error rate (BER). It is reported that inline-configuration provides best results for all MIMO mode-division multiplexing (MDM) systems covering transmission distance of 100 km with acceptable BER (10 dB) over MMF link to boost performance of MDM system.

  16. Baseband Feedback Frequency-Division Multiplexing with Low-Power dc-SQUIDs and Digital Electronics for TES X-Ray Microcalorimeters

    Science.gov (United States)

    Sakai, K.; Takei, Y.; Yamamoto, R.; Yamasaki, N. Y.; Mitsuda, K.; Hidaka, M.; Nagasawa, S.; Kohjiro, S.; Miyazaki, T.

    2014-08-01

    We are developing frequency-division multiplexing (FDM) systems with baseband feedback for TES X-ray microcalorimeter arrays for use with the DIOS mission. To meet the requirement of limited cooling capacity at cryogenic temperatures, we developed low-power and FDM-optmized dc-SQUIDs. To make maximum use of the SQUIDs, we also developed digital electronics using FPGA evaluation boards and ADC/DAC FMC daughter cards, and evaluated signal-to-noise ratios and gain-bandwidth products.

  17. Simultaneous frequency stabilization and high-power dense wavelength division multiplexing (HP-DWDM) using an external cavity based on volume Bragg gratings (VBGs)

    Science.gov (United States)

    Hengesbach, Stefan; Klein, Sarah; Holly, Carlo; Witte, Ulrich; Traub, Martin; Hoffmann, Dieter

    2016-03-01

    Multiplexing technologies enable the development of high-brightness diode lasers for direct industrial applications. We present a High-Power Dense Wavelength Division Multiplexer (HP-DWDM) with an average channel spacing of 1.7 (1.5) nm and a subsequent external cavity mirror to provide feedback for frequency stabilization and multiplexing in one step. The "self-optimizing" multiplexing unit consists of four reflective Volume Bragg Gratings (VBGs) with 99% diffraction efficiency and seven dielectric mirrors to overlay the radiation of five input channels with an adjustable channel spacing of 1-2 nm. In detail, we focus on the analysis of the overall optical efficiency, the change of the beam parameter product and the spectral width. The performance is demonstrated using five 90 μm multimode 9xx single emitters with M2angular intensity distribution changes strongly and the beam parameter product decreases by a factor of 1.2 to 1.9. Thereby the angular intensity distribution is more affected than the width of the beam waist. The spectral width per emitter decreases to 3-200 pm (FWHM) depending on the injection current and the reflectance of the feedback mirror (0.75%, 1.5%, 4%, 6% or 8%). The overall optical multiplexing efficiency ranges between 77% and 86%. With some modifications (e.g. enhanced AR-coatings) we expect 90-95%.

  18. Interlaboratory study of DNA extraction from multiple ground samples, multiplex real-time PCR, and multiplex qualitative PCR for individual kernel detection system of genetically modified maize.

    Science.gov (United States)

    Akiyama, Hiroshi; Sakata, Kozue; Makiyma, Daiki; Nakamura, Kosuke; Teshima, Reiko; Nakashima, Akie; Ogawa, Asako; Yamagishi, Toru; Futo, Satoshi; Oguchi, Taichi; Mano, Junichi; Kitta, Kazumi

    2011-01-01

    In many countries, the labeling of grains, feed, and foodstuff is mandatory if the genetically modified (GM) organism content exceeds a certain level of approved GM varieties. We previously developed an individual kernel detection system consisting of grinding individual kernels, DNA extraction from the individually ground kernels, GM detection using multiplex real-time PCR, and GM event detection using multiplex qualitative PCR to analyze the precise commingling level and varieties of GM maize in real sample grains. We performed the interlaboratory study of the DNA extraction with multiple ground samples, multiplex real-time PCR detection, and multiplex qualitative PCR detection to evaluate its applicability, practicality, and ruggedness for the individual kernel detection system of GM maize. DNA extraction with multiple ground samples, multiplex real-time PCR, and multiplex qualitative PCR were evaluated by five laboratories in Japan, and all results from these laboratories were consistent with the expected results in terms of the commingling level and event analysis. Thus, the DNA extraction with multiple ground samples, multiplex real-time PCR, and multiplex qualitative PCR for the individual kernel detection system is applicable and practicable in a laboratory to regulate the commingling level of GM maize grain for GM samples, including stacked GM maize.

  19. A new material platform of Si photonics for implementing architecture of dense wavelength division multiplexing on Si bulk wafer.

    Science.gov (United States)

    Zhang, Ziyi; Yako, Motoki; Ju, Kan; Kawai, Naoyuki; Chaisakul, Papichaya; Tsuchizawa, Tai; Hikita, Makoto; Yamada, Koji; Ishikawa, Yasuhiko; Wada, Kazumi

    2017-01-01

    A new materials group to implement dense wavelength division multiplexing (DWDM) in Si photonics is proposed. A large thermo-optic (TO) coefficient of Si malfunctions multiplexer/demultiplexer (MUX/DEMUX) on a chip under thermal fluctuation, and thus DWDM implementation, has been one of the most challenging targets in Si photonics. The present study specifies an optical materials group for DWDM by a systematic survey of their TO coefficients and refractive indices. The group is classified as mid-index contrast optics (MiDex) materials, and non-stoichiometric silicon nitride (SiN x ) is chosen to demonstrate its significant thermal stability. The TO coefficient of non-stoichiometric SiN x is precisely measured in the temperature range 24-76 °C using the SiN x rings prepared by two methods: chemical vapor deposition (CVD) and physical vapor deposition (PVD). The CVD-SiN x ring reveals nearly the same TO coefficient reported for stoichiometric CVD-Si 3 N 4 , while the value for the PVD-SiN x ring is slightly higher. Both SiN x rings lock their resonance frequencies within 100 GHz in this temperature range. Since CVD-SiN x needs a high temperature annealing to reduce N-H bond absorption, it is concluded that PVD-SiN x is suited as a MiDex material introduced in the CMOS back-end-of-line. Further stabilization is required, considering the crosstalk between two channels; a 'silicone' polymer is employed to compensate for the temperature fluctuation using its negative TO coefficient, called athermalization. This demonstrates that the resonance of these SiN x rings is locked within 50 GHz at the same temperature range in the wavelength range 1460-1620 nm (the so-called S, C, and L bands in optical fiber communication networks). A further survey on the MiDex materials strongly suggests that Al 2 O 3 , Ga 2 O 3 Ta 2 O 5 , HfO 2 and their alloys should provide even more stable platforms for DWDM implementation in MiDex photonics. It is discussed that the MiDex photonics

  20. Passive cavity surface-emitting lasers: option of temperature-insensitive lasing wavelength for uncooled dense wavelength division multiplexing systems

    Science.gov (United States)

    Shchukin, V. A.; Ledentsov, N. N.; Slight, T.; Meredith, W.; Gordeev, N. Y.; Nadtochy, A. M.; Payusov, A. S.; Maximov, M. V.; Blokhin, S. A.; Blokhin, A. A.; Zadiranov, Yu. M.; Maleev, N. A.; Ustinov, V. M.; Choquette, K. D.

    2016-03-01

    A concept of passive cavity surface-emitting laser is proposed aimed to control the temperature shift of the lasing wavelength. The device contains an all-semiconductor bottom distributed Bragg reflector (DBR), in which the active medium is placed, a dielectric resonant cavity and a dielectric top DBR, wherein at least one of the dielectric materials has a negative temperature coefficient of the refractive index, dn/dT < 0. This is shown to be the case for commonly used dielectric systems SiO2/TiO2 and SiO2/Ta2O5. Two SiO2/TiO2 resonant structures having a cavity either of SiO2 or TiO2 were deposited on a substrate, their optical power reflectance spectra were measured at various temperatures, and refractive index temperature coefficients were extracted, dn/dT = 0.0021 K-1 for SiO2 and dn/dT = -0.0092 K-1 for TiO2. Using such dielectric materials allows designing passive cavity surface-emitting lasers having on purpose either positive, or zero, or negative temperature shift of the lasing wavelength dλ/dT. A design for temperature-insensitive lasing wavelength (dλ/dT = 0) is proposed. Employing devices with temperature-insensitive lasing wavelength in wavelength division multiplexing systems may allow significant reducing of the spectral separation between transmission channels and an increase in number of channels for a defined spectral interval enabling low cost energy efficient uncooled devices.

  1. Dispersion-optimized optical fiber for high-speed long-haul dense wavelength division multiplexing transmission

    Science.gov (United States)

    Wu, Jindong; Chen, Liuhua; Li, Qingguo; Wu, Wenwen; Sun, Keyuan; Wu, Xingkun

    2011-07-01

    Four non-zero-dispersion-shifted fibers with almost the same large effective area (Aeff) and optimized dispersion properties are realized by novel index profile designing and modified vapor axial deposition and modified chemical vapor deposition processes. An Aeff of greater than 71 μm2 is obtained for the designed fibers. Three of the developed fibers with positive dispersion are improved by reducing the 1550nm dispersion slope from 0.072ps/nm2/km to 0.063ps/nm2/km or 0.05ps/nm2/km, increasing the 1550nm dispersion from 4.972ps/nm/km to 5.679ps/nm/km or 7.776ps/nm/km, and shifting the zero-dispersion wavelength from 1500nm to 1450nm. One of these fibers is in good agreement with G655D and G.656 fibers simultaneously, and another one with G655E and G.656 fibers; both fibers are beneficial to high-bit long-haul dense wavelength division multiplexing systems over S-, C-, and L-bands. The fourth developed fiber with negative dispersion is also improved by reducing the 1550nm dispersion slope from 0.12ps/nm2/km to 0.085ps/nm2/km, increasing the 1550nm dispersion from -4ps/nm/km to -6.016ps/nm/km, providing facilities for a submarine transmission system. Experimental measurements indicate that the developed fibers all have excellent optical transmission and good macrobending and splice performances.

  2. Rapid diagnosis of sepsis with TaqMan-Based multiplex real-time PCR.

    Science.gov (United States)

    Liu, Chang-Feng; Shi, Xin-Ping; Chen, Yun; Jin, Ye; Zhang, Bing

    2018-02-01

    The survival rate of septic patients mainly depends on a rapid and reliable diagnosis. A rapid, broad range, specific and sensitive quantitative diagnostic test is the urgent need. Thus, we developed a TaqMan-Based Multiplex real-time PCR assays to identify bloodstream pathogens within a few hours. Primers and TaqMan probes were designed to be complementary to conserved regions in the 16S rDNA gene of different kinds of bacteria. To evaluate accurately, sensitively, and specifically, the known bacteria samples (Standard strains, whole blood samples) are determined by TaqMan-Based Multiplex real-time PCR. In addition, 30 blood samples taken from patients with clinical symptoms of sepsis were tested by TaqMan-Based Multiplex real-time PCR and blood culture. The mean frequency of positive for Multiplex real-time PCR was 96% at a concentration of 100 CFU/mL, and it was 100% at a concentration greater than 1000 CFU/mL. All the known blood samples and Standard strains were detected positively by TaqMan-Based Multiplex PCR, no PCR products were detected when DNAs from other bacterium were used in the multiplex assay. Among the 30 patients with clinical symptoms of sepsis, 18 patients were confirmed positive by Multiplex real-time PCR and seven patients were confirmed positive by blood culture. TaqMan-Based Multiplex real-time PCR assay with highly sensitivity, specificity and broad detection range, is a rapid and accurate method in the detection of bacterial pathogens of sepsis and should have a promising usage in the diagnosis of sepsis. © 2017 Wiley Periodicals, Inc.

  3. Conversion of asynchronous 10 Gbit/s Ethernet NRZ frame into a synchronous RZ frame and multiplexing to 170 Gbit/s

    DEFF Research Database (Denmark)

    Laguardia Areal, Janaina; Hu, Hao; Palushani, Evarist

    2010-01-01

    This paper presents an optical circuit for frame synchronization and pulse compression of 10G Ethernet frames with 12000 bits and multiplexing to a 170 Gbit/s optical time division multiplexed data stream.......This paper presents an optical circuit for frame synchronization and pulse compression of 10G Ethernet frames with 12000 bits and multiplexing to a 170 Gbit/s optical time division multiplexed data stream....

  4. Modelling of Data Stream Time Characteristics for Use of Inverse Multiplexer

    Directory of Open Access Journals (Sweden)

    Petr Jares

    2014-01-01

    Full Text Available Today, increasing of the transmission rate in a telecommunications network is possible in various ways. One of them is inverse multiplexing. The inverse multiplexer divides a data stream to multiple parallel channels. This principle not only allows to increase the total available transmission rate, but also allows to reduce the error rate and interruption in data stream. The digital subscriber line may be used for the implementation of the inverse multiplex. Accurate knowledge of the transmission parameters of a digital subscriber line and the entire infrastructure of the network provider is necessary for the effective functioning of the terminal device with inverse multiplexing. It is necessary to know not only the parameters related to the transmission rate, but above all the parameters relevant to the time characteristics of data transmission. This paper describes how to obtain the transmission parameters of real digital subscriber lines and their modelling.

  5. Cascaded edge illuminated holograms in phenanthrenequinone-doped poly(methyl methacrylate) polymers for optical code division multiplexing applications

    Science.gov (United States)

    Kostuk, Raymond K.; Maeda, Wendy; Chen, Chia-Hung

    2005-09-01

    Edge illuminated holographic Bragg filters formed in phenanthrenequinone (PQ) doped poly (methyl-methacrylate) (MMA) are evaluated for optical code division multiple access (OCDMA) coding and decoding applications. The polymer characteristics are optimized using a factorial design technique. Experimental cascaded Bragg filters are formed to select two different wavelengths with a fixed distance between the gratings and are directly coupled to a fiber measurement system. The configuration and tolerances of the cascaded gratings are shown to be practical for time/wavelength OCDMA applications.

  6. Four-channel coarse-wavelength division multiplexing demultiplexer with a modified Mach-Zehnder interferometer configuration on a silicon-on-insulator waveguide

    Science.gov (United States)

    Lin, Yen-Juei; Lee, San-Liang; Yao, Chiu-Lin

    2003-05-01

    A coarse wavelength division multiplexer is designed on a silicon-on-insulator waveguide using the Mach-Zehnder interferometers with novel multimode interface-periodically segmented waveguide couplers and segmented waveguide arms. It is viable for metro and access applications, since it can be inexpensive and provide easy fabrication, compact size, and good output performance. As a design example, the channel spacing of the demultiplexer is chosen to be 24.5 nm for applications to the 10-Gigabit Ethernet. The simulation results show that the wide-passband demultiplexer can have insertion loss less than 2.3 dB and crosstalk better than 18 dB.

  7. Compact 35μm fiber coupled diode laser module based on dense wavelength division multiplexing of NBA mini-bars

    Science.gov (United States)

    Witte, U.; Traub, M.; Di Meo, A.; Hamann, M.; Rubel, D.; Hengesbach, S.; Hoffmann, D.

    2016-03-01

    We present a compact, modular and cross talk free approach for dense wavelength division multiplexing of high power diode lasers based on ultra-steep dielectric filters. The mini bars consist of 5 narrow stripe broad area emitters with a beam parameter product in the range of 2 mm mrad and a wavelength spacing of 2.5 nm between 2 adjacent emitters. Experimental results for fiber coupling (35 μm core diameter, NA < 0.2) of internally and externally stabilized diode lasers are presented. Optical losses are analyzed and alternative optical designs to overcome the current limitations of the setup are discussed.

  8. Design of elliptical-core mode-selective photonic lanterns with six modes for MIMO-free mode division multiplexing systems.

    Science.gov (United States)

    Sai, Xiaowei; Li, Yan; Yang, Chen; Li, Wei; Qiu, Jifang; Hong, Xiaobin; Zuo, Yong; Guo, Hongxiang; Tong, Weijun; Wu, Jian

    2017-11-01

    Elliptical-core few mode fiber (EC-FMF) is used in a mode division multiplexing (MDM) transmission system to release multiple-input-multiple-output (MIMO) digital-signal-processing, which reduces the cost and the complexity of the receiver. However, EC-FMF does not match with conventional multiplexers/de-multiplexers (MUXs/DeMUXs) such as a photonic lantern, leading to extra mode coupling loss and crosstalk. We design elliptical-core mode-selective photonic lanterns (EC-MSPLs) with six modes, which can match well with EC-FMF in MIMO-free MDM systems. Simulation of the EC-MSPL using the beam propagation method was demonstrated employing a combination of either step-index or graded-index fibers with six different sizes of cores, and the taper transition length of 8 cm or 4 cm. Through numerical simulations and optimizations, both types of photonic lanterns can realize low loss transmission and low crosstalk of below -20.0  dB for all modes.

  9. Multiplexed measurements by time resolved spectroscopy using colloidal CdSe/ZnS quantum dots

    Science.gov (United States)

    Kaiser, U.; Jimenez de Aberasturi, D.; Malinowski, R.; Amin, F.; Parak, W. J.; Heimbrodt, W.

    2014-01-01

    Multiplexed measurements of analytes in parallel is a topical demand in bioanalysis and bioimaging. An interesting alternative to commonly performed spectral multiplexing is lifetime multiplexing. In this Letter, we present a proof of principle of single-color lifetime multiplexing by coupling the same fluorophore to different nanoparticles. The effective lifetime of the fluorophores can be tuned by more than one order of magnitude due to resonance energy transfer from donor states. Measurements have been done on a model systems consisting of ATTO-590 dye molecules linked to either gold particles or to CdSe/ZnS core shell quantum dots. Both systems show the same luminescence spectrum of ATTO-590 dye emission in continuous wave excitation, but can be distinguished by means of time resolved measurements. The dye molecules bound to gold particles exhibit a mono-exponential decay with a lifetime of 4.5 ns, whereas the dye molecules bound to CdSe/ZnS dots show a nonexponential decay with a slow component of about 135 ns due to the energy transfer from the quantum dots. We demonstrate the fundamental possibility to determine the mixing ratio for dyes with equal luminescence spectra but very different transients. This opens up a pathway independent of the standard optical multiplexing with many different fluorophores emitting from the near ultraviolet to the near infrared spectral region.

  10. Multiplexed measurements by time resolved spectroscopy using colloidal CdSe/ZnS quantum dots

    Energy Technology Data Exchange (ETDEWEB)

    Kaiser, U.; Jimenez de Aberasturi, D.; Malinowski, R.; Amin, F.; Parak, W. J.; Heimbrodt, W., E-mail: Wolfram.Heimbrodt@physik.uni-marburg.de [Department of Physics and Materials Sciences Center, Philipps-University of Marburg, Renthof 5, D-35032 Marburg (Germany)

    2014-01-27

    Multiplexed measurements of analytes in parallel is a topical demand in bioanalysis and bioimaging. An interesting alternative to commonly performed spectral multiplexing is lifetime multiplexing. In this Letter, we present a proof of principle of single-color lifetime multiplexing by coupling the same fluorophore to different nanoparticles. The effective lifetime of the fluorophores can be tuned by more than one order of magnitude due to resonance energy transfer from donor states. Measurements have been done on a model systems consisting of ATTO-590 dye molecules linked to either gold particles or to CdSe/ZnS core shell quantum dots. Both systems show the same luminescence spectrum of ATTO-590 dye emission in continuous wave excitation, but can be distinguished by means of time resolved measurements. The dye molecules bound to gold particles exhibit a mono-exponential decay with a lifetime of 4.5 ns, whereas the dye molecules bound to CdSe/ZnS dots show a nonexponential decay with a slow component of about 135 ns due to the energy transfer from the quantum dots. We demonstrate the fundamental possibility to determine the mixing ratio for dyes with equal luminescence spectra but very different transients. This opens up a pathway independent of the standard optical multiplexing with many different fluorophores emitting from the near ultraviolet to the near infrared spectral region.

  11. Detection of three porcine vesicular viruses using multiplex real-time primer-probe energy transfer

    DEFF Research Database (Denmark)

    Rasmussen, Thomas Bruun; Uttenthal, Åse; Aguero, M.

    2006-01-01

    Rapid identification of the etiologic agent in infected animals is important for the control of an outbreak of vesicular disease in livestock. We have in the present study developed a multiplex real-time reverse transcription-PCR, based on primer-probe energy transfer (PriProET), for simultaneous...

  12. Prediction of the eigenvectors for spatial multiplexing MIMO systems in time-varying channels

    DEFF Research Database (Denmark)

    Nguyen, Hung Tuan; Leus, Geert; Khaled, Nadia

    2005-01-01

    the performance of a prediction scheme for multiple input multiple output (MIMO) systems that apply spatial multiplexing. We aim at predicting the future precoder/decoder directly without going through the prediction of the channel matrix. The results show that in a slowly time varying channel an increase...

  13. An in-building network based on community access television integration with quadrature phase-shift keying orthogonal frequency-division multiplexing

    International Nuclear Information System (INIS)

    Chen, Chia-Yi; Lin, Ying-Pyng; Lu, Hai-Han; Wu, Po-Yi; Lin, Huang-Chang; Wu, Hsiao-Wen

    2012-01-01

    An in-building network based on cable television (CATV) integration with quadrature phase-shift keying (QPSK) orthogonal frequency-division multiplexing (OFDM) transport over a combination of single-mode fibers (SMF) and perfluorinated graded-index plastic optical fibers (GI-POF) is proposed and experimentally demonstrated. In this system, a 1558.5 nm optical signal is directly transmitted along two fiber spans (20 km SMF + 25 m GI-POF). An optimum guard band is carefully established to ensure that no very substantial signal interference is induced between the CATV and QPSK OFDM bands. Error free transmission with sufficiently low bit error rate values was achieved for 1.25 Gbps/771.5 MHz QPSK OFDM signals; also, acceptable carrier-to-noise ratio, composite second-order, and composite triple-beat performances were obtained for CATV signals. This proposed network is significant because it is economical and convenient to install. (paper)

  14. Novel wavelength division multiplex-radio over fiber-passive optical network architecture for multiple access points based on multitone generation and triple sextupling frequency

    Science.gov (United States)

    Cheng, Guangming; Guo, Banghong; Liu, Songhao; Huang, Xuguang

    2014-01-01

    An innovative wavelength division multiplex-radio over fiber-passive optical network architecture for multiple access points (AP) based on multitone generation and triple sextupling frequency is proposed and demonstrated. A dual-drive Mach-Zehnder modulator (DD-MZM) is utilized to realize the multitone generation. Even sidebands are suppressed to make the adjacent frequency separation twice the frequency of the local oscillator by adjusting the modulation voltage of the DD-MZM. Due to adopting three fiber Bragg gratings to reflect the unmodulated sidebands for uplink communications source free at optical network unit (ONU), is achieved. The system can support at least three APs at one ONU simultaneously with a 30 km single-mode fiber (SMF) transmission and 5 Gb/s data rate both for uplink and downlink communications. The theoretical analysis and simulation results show the architecture has an excellent performance and will be a promising candidate in future hybrid access networks.

  15. Energy-efficient orthogonal frequency division multiplexing-based passive optical network based on adaptive sleep-mode control and dynamic bandwidth allocation

    Science.gov (United States)

    Zhang, Chongfu; Xiao, Nengwu; Chen, Chen; Yuan, Weicheng; Qiu, Kun

    2016-02-01

    We propose an energy-efficient orthogonal frequency division multiplexing-based passive optical network (OFDM-PON) using adaptive sleep-mode control and dynamic bandwidth allocation. In this scheme, a bidirectional-centralized algorithm named the receiver and transmitter accurate sleep control and dynamic bandwidth allocation (RTASC-DBA), which has an overall bandwidth scheduling policy, is employed to enhance the energy efficiency of the OFDM-PON. The RTASC-DBA algorithm is used in an optical line terminal (OLT) to control the sleep mode of an optical network unit (ONU) sleep and guarantee the quality of service of different services of the OFDM-PON. The obtained results show that, by using the proposed scheme, the average power consumption of the ONU is reduced by ˜40% when the normalized ONU load is less than 80%, compared with the average power consumption without using the proposed scheme.

  16. New Compensation Technique for Fiber Impairments in Ultra High Capacity Super channel Based on (QDPASK Dense wavelength division multiplex (DWDM systems

    Directory of Open Access Journals (Sweden)

    Ibrahim A.Murdas

    2017-07-01

    Full Text Available In this paper we want to increase the data rate and to get larger transmission distance, therefore we use the Advanced modulation technique QDPASK in DWDM system with low channels space. In case of long transmission distance and multi channels system both giving rise to inter channel crosstalk induced by fiber nonlinearities as a result the use of advanced modulation technique becomes difficult. In this paper Quaternary differential phase amplitude shift keying (QDPASK is designed for 32 dense wavelength division multiplexing (DWDM channels, therefore we proposed a new cascade compensation system consist of optical and digital back propagation techniques (ODBP for compensate the linear and nonlinear effects . A performance of the system was reported using QDPASK DWDM fiber-optic system for various system parameters. The research is tested in VPI maker environment.

  17. An auxiliary graph based dynamic traffic grooming algorithm in spatial division multiplexing enabled elastic optical networks with multi-core fibers

    Science.gov (United States)

    Zhao, Yongli; Tian, Rui; Yu, Xiaosong; Zhang, Jiawei; Zhang, Jie

    2017-03-01

    A proper traffic grooming strategy in dynamic optical networks can improve the utilization of bandwidth resources. An auxiliary graph (AG) is designed to solve the traffic grooming problem under a dynamic traffic scenario in spatial division multiplexing enabled elastic optical networks (SDM-EON) with multi-core fibers. Five traffic grooming policies achieved by adjusting the edge weights of an AG are proposed and evaluated through simulation: maximal electrical grooming (MEG), maximal optical grooming (MOG), maximal SDM grooming (MSG), minimize virtual hops (MVH), and minimize physical hops (MPH). Numeric results show that each traffic grooming policy has its own features. Among different traffic grooming policies, an MPH policy can achieve the lowest bandwidth blocking ratio, MEG can save the most transponders, and MSG can obtain the fewest cores for each request.

  18. λ-Selection Strategy in C+L Band 1-Pbit/s (448 WDM/19-Core/128 Gbit/s/channel) Flex-Grid Space Division Multiplexed Transmission

    DEFF Research Database (Denmark)

    Asif, Rameez; Ye, Feihong; Morioka, Toshio

    2015-01-01

    In this paper, an inter-core crosstalk based wavelength selection scheme has been proposed for flex-grid superchannels in space division multiplexed transmission. The two λ-selection strategies are categorized as: (a) aligned wavelength super-channels (Aλ-SCs), where all super-channels are placed...

  19. A novel multiplex absorption spectrometer for time-resolved studies

    Science.gov (United States)

    Lewis, Thomas; Heard, Dwayne E.; Blitz, Mark A.

    2018-02-01

    A Time-Resolved Ultraviolet/Visible (UV/Vis) Absorption Spectrometer (TRUVAS) has been developed that can simultaneously monitor absorption at all wavelengths between 200 and 800 nm with millisecond time resolution. A pulsed photolysis laser (KrF 248 nm) is used to initiate chemical reactions that create the target species. The absorption signals from these species evolve as the composition of the gas in the photolysis region changes over time. The instrument can operate at pressures over the range ˜10-800 Torr and can measure time-resolved absorbances systems (in particular the Herriott cell), there are fundamental differences, most notably the ability to adjust each mirror to maximise the overlap between the probe beam and the photolysis laser. Another feature which aids the sensitivity and versatility of the system is the use of 2 high-throughput spectrographs coupled with sensitive line-array CCDs, which can measure absorbance from ˜200 to 800 nm simultaneously. The capability of the instrument is demonstrated via measurements of the absorption spectrum of the peroxy radical, HOCH2CH2O2, and its self-reaction kinetics.

  20. A Time-Multiplexed Track-Trigger for the CMS HL-LHC upgrade

    CERN Document Server

    Hall, Geoffrey

    2016-01-01

    A new CMS Tracker is under development for operation at the High Luminosity LHC from 2025. It includes an outer tracker based on special modules of two different types which will construct track stubs using spatially coincident clusters in two closely spaced sensor layers, to reject low transverse momentum track hits and reduce the data volume before data transmission to the Level-1 trigger. The tracker data will be used to reconstruct track segments in dedicated processors before onward transmission to other trigger processors which will combine tracker information with data originating from the calorimeter and muon detectors, to make the final L1 trigger decision. The architecture for processing the tracker data outside the detector is under study, using several alternative approaches. One attractive possibility is to exploit a Time Multiplexed design similar to the one which is currently being implemented in the CMS calorimeter trigger as part of the Phase I trigger upgrade. The novel Time Multiplexed Trig...

  1. Development of multiplex real-time PCR assay for the detection of Brucella spp., Leptospira spp. and Campylobacter foetus.

    Science.gov (United States)

    Selim, Abdelfattah M; Elhaig, Mahmoud M; Gaede, Wolfgang

    2014-12-29

    Abortion among dairy cattle is one of the major causes of economic losses in the livestock industry. This study describes a 1-step multiplex real-time polymerase chain reaction (PCR) to detect Brucella spp., Leptospira spp. and Campylobacter foetus, these are significant bacteria commonly implicated in bovine abortion. ß-actin was added to the same PCR reaction as an internal control to detect any extraction failure or PCR inhibition. The detection limit of multiplex real-time PCR using purified DNA from cultured organisms was set to 5 fg for Leptospira spp. and C. foetus and to 50 fg for Brucella spp. The multiplex real-time PCR did not produce any non-specific amplification when tested with different strains of the 3 pathogens. This multiplex real-time PCR provides a valuable tool for diagnosis, simultaneous and rapid detection for the 3 pathogens causing abortion in bovine.

  2. Development of multiplex real-time PCR assay for the detection of Brucella spp., Leptospira spp. and Campylobacter foetus

    Directory of Open Access Journals (Sweden)

    Abdelfattah M. Selim

    2014-12-01

    Full Text Available Abortion among dairy cattle is one of the major causes of economic losses in the livestock industry. This study describes a 1-step multiplex real-time polymerase chain reaction (PCR to detect Brucella spp., Leptospira spp. and Campylobacter foetus, these are significant bacteria commonly implicated in bovine abortion. ß-actin was added to the same PCR reaction as an internal control to detect any extraction failure or PCR inhibition. The detection limit of multiplex real-time PCR using purified DNA from cultured organisms was set to 5 fg for Leptospira spp. and C. foetus and to 50 fg for Brucella spp. The multiplex real-time PCR did not produce any non-specific amplification when tested with different strains of the 3 pathogens. This multiplex real-time PCR provides a valuable tool for diagnosis, simultaneous and rapid detection for the 3 pathogens causing abortion in bovine.

  3. The smallest divisions of time: terminological and lexicographical aspects

    Directory of Open Access Journals (Sweden)

    Francisco Javier Sánchez Martín

    2012-12-01

    Full Text Available This study of the ancient divisible units of the hours of day (the terms borrowed from latin: átomo, cuadrante, momento, punto and uncia use the principal sources of the medieval and Renaissance works. With regard to the former, an example of the cultural transmission of this specialized lexicon can be seen in its reception in The Etymologies of Saint Isidore (c. 560-636 and in the Libro de las propiedades de las cosas of Bartolomé Ánglico (1240, an encyclopaedia that had an extraordinary reception in Western Europe until the sixteenth century. Amongst the Renaissance sources several studies stand out: Chronographía or Reportorio de los tiempos (1545 by Jerónimo de Chaves, the anonymous book Repertorio de los tiempos (1554 and Chronographía y Repertorio de los tiempos (1585 by Francisco Vicente de Tornamira, a set of treatises which includes the knowledge compiled in the medieval encyclopaedias mentioned above. These works allow us to verify the transmission of this lexicon, in a stage marked by the growing interest in metrological issues. The analysis of this terminology reflects the semantic connections established between the various dimensions (weight, space and time as its semantic reference moves from the spatial domain to the that of time and relationships are attested in the earliest dictionaries of the Spanish language.

  4. Wavelength- and Time-Selective Reconfigurable Optical Add/Drop Multiplexer Using Time-Frequency Domain Processing

    Directory of Open Access Journals (Sweden)

    Konishi Tsuyoshi

    2010-01-01

    Full Text Available We propose and demonstrate a wavelength- and time-selective reconfigurable optical add/drop multiplexer (ROADM using time-frequency domain processing. The proposed ROADM is realized by allocating wavelength channels and time slots to corresponding 2D spatial channels on a MEMS optical switch. Experimental results show the wavelength- and time-selective drop operation for a signal with equivalent 3.2 Tb/s (0.64  channels, and the reconfigurability by the switching operation of the MEMS optical switch.

  5. Wavelength- and Time-Selective Reconfigurable Optical Add/Drop Multiplexer Using Time-Frequency Domain Processing

    Directory of Open Access Journals (Sweden)

    Tsuyoshi Konishi

    2010-01-01

    Full Text Available We propose and demonstrate a wavelength- and time-selective reconfigurable optical add/drop multiplexer (ROADM using time-frequency domain processing. The proposed ROADM is realized by allocating wavelength channels and time slots to corresponding 2D spatial channels on a MEMS optical switch. Experimental results show the wavelength- and time-selective drop operation for a signal with equivalent 3.2 Tb/s (0.64 Tb/s×5 channels, and the reconfigurability by the switching operation of the MEMS optical switch.

  6. Optical Efficiency and R(T,I) Measurements of ACTPol TESes Using Time Domain Multiplexing Electronics

    Science.gov (United States)

    Pappas, C. G.; Beall, J.; Brevick, J.; Cho, H. M.; Devlin, M. J.; Fox, A.; Grace, E. A.; Hilton, G. C.; Hubmayr, J.; Irwin, K. D.; Klein, J.; Li, D.; Lungu, M.; Newburgh, L. B.; Nibarger, J. P.; Niemack, M. D.; McMahon, J. J.; Page, L. A.; Schmitt, B. L.; Staggs, S. T.; Van Lanen, J.; Wollack, E. J.

    2014-09-01

    We present new data on feedhorn-coupled transition-edge sensor devices fabricated for the second-generation receiver (ACTPol) for the Atacama cosmology telescope (ACT). First, we describe optical efficiency measurements of the latest ACTPol detector wafer, which has a average optical efficiency. Next, we discuss measurements of the TES resistance as a function of temperature and bias current () using the ACTPol time-domain multiplexing electronics. Qualitative agreement between data at low bias current and the two-fluid model prediction is shown. Using the two-fluid model and low bias current data, and at our operating bias current are calculated.

  7. Analysis of Signal-to-Crosstalk Ratio Variations due to Four-Wave Mixing in Dense Wavelength Division Multiplexing Systems Implemented with Standard Single-Mode Fibers

    Directory of Open Access Journals (Sweden)

    Sait Eser KARLIK

    2016-10-01

    Full Text Available In this paper, variation of the signal-to-crosstalk ratio (SXR due to effects of four-wave mixing (FWM has been analyzed on center channels of 5-, 7-, 9-channel dense wavelength division multiplexing (DWDM systems implemented with G.652 standard single-mode fibers (SSMFs for 12.5 GHz, 25 GHz, 50 GHz and 100 GHz equal channel spacing values. Center channels on such systems are the most severely impacted channels by FWM. Therefore, results obtained are the worst-case values for the DWDM system performance and important for system design. Simulations have been performed for systems using three different commercially available SMFs having different design parameter values for chromatic dispersion, dispersion slope, nonlinearity coefficient and attenuation coefficient which are all in the scope of the G.652 Recommendation of Telecommunication Standardization Sector of International Telecommunication Union (ITU-T for SSMFs. In those simulations, under the impact of FWM, variation of SXR with variations in input powers, channel spacings and link lengths have been observed. Simulation results display the combined effect of the optical fiber and system design parameters on FWM performance of DWDM systems and give important clues for not only long-haul but also access network implementations of DWDM systems.

  8. Novel Raman Parametric Hybrid L-Band Amplifier with Four-Wave Mixing Suppressed Pump for Terabits Dense Wavelength Division Multiplexed Systems

    Directory of Open Access Journals (Sweden)

    Gaganpreet Kaur

    2016-01-01

    Full Text Available We demonstrate improved performance of parametric amplifier cascaded with Raman amplifier for gain of 54.79 dB. We report amplification of L-band using 100 × 10 Gbps Dense Wavelength Division Multiplexed (DWDM system with 25 GHz channel spacing. The gain achieved is the highest reported so far with gain flatness of 3.38 dB without using any gain flattening technique. Hybrid modulated parametric pump is used for suppressing four-wave mixing (FWM around pump region, resulting in improvement of gain flatness by 2.42 dB. The peak to peak variation of gain is achieved less than 1.6 dB. DWDM system with 16-channel, 25 GHz spaced system has been analyzed thoroughly with hybrid modulated parametric pump amplified Raman-FOPA amplifier for gain flatness and improved performance in terms of BER and Q-factor.

  9. Fabrication and optical characteristics of silicon-based two-dimensional wavelength division multiplexing splitter with photonic crystal directional waveguide couplers

    International Nuclear Information System (INIS)

    Liu, Cheng-Yang

    2011-01-01

    Photonic crystals have many potential applications because of their ability to control lightwave propagation. We report on the fabrication and optical properties of quasi-two-dimensional photonic crystals with triangular lattice of dielectric rods in air. Rod-type photonic crystal structures were fabricated in silicon by electron beam lithography and dry-etching techniques. Wavelength division multiplexing splitters were fabricated from two-dimensional photonic crystal directional waveguide couplers. Transmission spectra were measured and device operation was shown to be in agreement with theoretical calculations. The splitters can be used in visible light region. Such an approach to photonic element systems should enable new applications for designing components in photonic integrated circuits. -- Highlights: → We report the fabrication and optical properties of rod-type photonic crystal. → The splitter was fabricated by electron beam lithography and dry-etching techniques. → The splitter was composed of directional waveguide couplers. → Measured transmission spectra are in agreement with theoretical calculations. → The splitters can be used in visible light region.

  10. Combined peak-to-average power ratio reduction and physical layer security enhancement in optical orthogonal frequency division multiplexing visible-light communication systems

    Science.gov (United States)

    Wang, Zhongpeng; Chen, Shoufa

    2016-07-01

    A physical encryption scheme for discrete Hartley transform (DHT) precoded orthogonal frequency division multiplexing (OFDM) visible-light communication (VLC) systems using frequency domain chaos scrambling is proposed. In the scheme, the chaos scrambling, which is generated by a modified logistic mapping, is utilized to enhance the physical layer of security, and the DHT precoding is employed to reduce of OFDM signal for OFDM-based VLC. The influence of chaos scrambling on peak-to-average power ratio (PAPR) and bit error rate (BER) of systems is studied. The experimental simulation results prove the efficiency of the proposed encryption method for DHT-precoded, OFDM-based VLC systems. Furthermore, the influence of the proposed encryption to the PAPR and BER of systems is evaluated. The experimental results show that the proposed security scheme can protect the DHT-precoded, OFDM-based VLC from eavesdroppers, while keeping the good BER performance of DHT-precoded systems. The BER performance of the encrypted and DHT-precoded system is almost the same as that of the conventional DHT-precoded system without encryption.

  11. Peak-to-average power ratio reduction in orthogonal frequency division multiplexing-based visible light communication systems using a modified partial transmit sequence technique

    Science.gov (United States)

    Liu, Yan; Deng, Honggui; Ren, Shuang; Tang, Chengying; Qian, Xuewen

    2018-01-01

    We propose an efficient partial transmit sequence technique based on genetic algorithm and peak-value optimization algorithm (GAPOA) to reduce high peak-to-average power ratio (PAPR) in visible light communication systems based on orthogonal frequency division multiplexing (VLC-OFDM). By analysis of hill-climbing algorithm's pros and cons, we propose the POA with excellent local search ability to further process the signals whose PAPR is still over the threshold after processed by genetic algorithm (GA). To verify the effectiveness of the proposed technique and algorithm, we evaluate the PAPR performance and the bit error rate (BER) performance and compare them with partial transmit sequence (PTS) technique based on GA (GA-PTS), PTS technique based on genetic and hill-climbing algorithm (GH-PTS), and PTS based on shuffled frog leaping algorithm and hill-climbing algorithm (SFLAHC-PTS). The results show that our technique and algorithm have not only better PAPR performance but also lower computational complexity and BER than GA-PTS, GH-PTS, and SFLAHC-PTS technique.

  12. Implementasi dan Evaluasi Kinerja Multi Input SingleOutput Orthogonal Frequency Division Multiplexing (MISO OFDM Menggunakan Wireless Open Access Research Platform (WARP

    Directory of Open Access Journals (Sweden)

    Galih Permana Putra

    2017-01-01

    Full Text Available Teknologi komunikasi nirkabel terus berkembang untuk memenuhi kebutuhan manusia akan koneksi informasi yang cepat, pengiriman data yang berkapasitas besar dan dapat diandalkan. Di dalam proses tersebut banyak sekali gangguan yang dapat mempengaruhi penurunan kinerja komunikasi diantaranya adalah multipath fading [1]. Multi Input Single Output (MISO merupakan salah satu teknik space diversity yang menggunakan banyak antena dengan tujuan untuk mengatasi multipath fading. Adapun pada proses transmisi digunakan teknik Orthogonal Frequency-Division Multiplexing (OFDM yang bertujuan memberikan keuntungan dalam hal efisiensi pada saat transmisi data dan mampu menghindari Inter Simbol Interference (ISI. Pada penelitian ini akan dibandingkan kinerja sistem MISO OFDM dan SISO OFDM yang akan disimulasikan dan di implementasikan pada modul Wireless Open Access Penelitian Platform (WARP untuk mengevaluasi kinerja BER sebagai fungsi dari daya pancar dan jarak variasi. Parameter yang digunakan di dalam pengukuran berdasarkan IEEE 802.11 a/g karena menggunakan frekuensi 2,4 Ghz. Terdapat dua skema pengukuran yaitu SISO OFDM dan MISO OFDM dengan variasi jarak 4,6 dan 8 meter dengan variasi daya pancar -35 s/d -4 dBm dengan peningkatan gain 5 kali secara berkala. Dari dua skema yang dilaksanakan dapat disimpulkan bahwa semakin jauh jarak antara pemancar dan penerima maka dibutuhkan penambahan gain untuk menjaga kualitas data yang dikirimkan. Disamping itu, terdapat perbedaan nilai gain untuk mencapai nilai BER = dibutuhkan penambahan gain = - 33 sedangkan pada SISO OFM dibutuhkan penambahan gain = -18.

  13. Design and characterization of 16-mode PANDA polarization-maintaining few-mode ring-core fiber for spatial division multiplexing

    Science.gov (United States)

    Cao, Yuan; Zhao, Yongli; Yu, Xiaosong; Han, Jiawei; Zhang, Jie

    2017-11-01

    A PANDA polarization-maintaining few-mode ring-core fiber (PM-FM-RCF) structure with two air holes around the ring core is proposed. The relative mode multiplicity factor (RMMF) is defined to evaluate the spatial efficiency of the designed PM-FM-RCF. The performance analysis and comparison of the proposed PANDA PM-FM-RCFs considering three different types of step-index profiles are detailed. Through modal characteristic analysis and numerical simulation, the PM-FM-RCF with a lower refractive index difference (Δnoi=1.5%) between the ring core and the inner central circle can support up to 16 polarization modes with large RMMF at C-band, which shows the optimum modal properties compared with the PM-FM-RCF with higher Δnoi. All the supported polarization modes are effectively separated from their adjacent polarization modes with effective refractive index differences (Δn) larger than 10-4, which also show relatively small chromatic dispersion (-20 to 25 ps/nm/km), low attenuation (<1.4 dB/km), and small bending radius (˜8 mm) over the C-band. The designed PM-FM-RCF can be compatible with standard single-mode fibers and applied in multiple-input multiple-output-free spatial division multiplexing optical networks for short-reach optical interconnection.

  14. 32 X 2.5 Gb/s Optical Code Division Multiplexing (O-CDM) For Agile Optical Networking (Phase II) Final Report CRADA No. TC02051.0

    Energy Technology Data Exchange (ETDEWEB)

    Bennett, C. V. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Mendez, A. J. [Mendez R & D Associates, El Segundo, CA (United States)

    2017-09-08

    This was a collaborative effort between Lawrence Livermore National Security, LLC (formerly The Regents of the University of California)/Lawrence Livermore National Laboratory (LLNL) and Mendez R & D Associates (MRDA) to develop and demonstrate a reconfigurable and cost effective design for optical code division multiplexing (O-CDM) with high spectral efficiency and throughput, as applied to the field of distributed computing, including multiple accessing (sharing of communication resources) and bidirectional data distribution in fiber-to-the-premise (FTTx) networks.

  15. Time-resolved chemiluminescence strategy for multiplexed immunoassay of clenbuterol and ractopamine.

    Science.gov (United States)

    Han, Jing; Gao, Hongfei; Wang, Wenwen; Wang, Zhenxing; Fu, Zhifeng

    2013-10-15

    A novel time-resolved chemiluminescence (CL) strategy was proposed for immunoassay of multiple analytes in a single run. The strategy was performed based on the distinction of the kinetic characteristics of different CL reaction systems, which allowed detection of multiple analytes in different time windows. The strategy was evaluated by using clenbuterol and ractopamine as the model analytes. Horseradish peroxidase (HRP) and alkaline phosphatase (ALP) were adopted as the signal probes to tag the two antigens due to their very different CL kinetic characteristics. After the competitive immunoreactions, the two CL signals were simultaneously triggered by adding the CL coreactants. Then the signals for clenbuterol and ractopamine were in turn detected after 0.6 s and 25 min of the reaction triggering. Due to the distinguishable detection time windows for HRP and ALP, the cross-talk resulting from the mixed CL reaction systems was effectively avoided, which was frequently encountered in some other multiplexed immunoassays based on multi-label modes. The linear ranges for clenbuterol and ractopamine were both 1.0-500 ng/mL, with detection limits of 0.50 ng/mL (S/N=2). The results for real sample analysis demonstrated that this study could provide a simple, low-cost and fast approach toward multiplexed immunoassay. Copyright © 2013 Elsevier B.V. All rights reserved.

  16. a phenomenon for achieving time-division-multiplexed multi-port ...

    Indian Academy of Sciences (India)

    Olive Ray

    that the switch node voltage should remain clamped to the output dc voltage so long as the power interval exists for the interfaced voltage-fed converter. The following are the advantages of using switched- boost action in order to generate multi-output converters: 1. Converters based upon this principle operate using lower.

  17. a phenomenon for achieving time-division-multiplexed multi-port ...

    Indian Academy of Sciences (India)

    Olive Ray

    cluster of such loads in a residential system may comprise a nanogrid. The power rating for the overall system lies typically within 1 kW. The scope of the work presented here would describe power converters that can be used in nanogrid applications [1–4]. Multi-port power converter topologies reported in liter- ature can be ...

  18. 112-Tb/s space-division multiplexed DWDM transmission with 14-b/s/Hz aggregate spectral efficiency over a 76.8-km seven-core fiber.

    Science.gov (United States)

    Zhu, B; Taunay, T F; Fishteyn, M; Liu, X; Chandrasekhar, S; Yan, M F; Fini, J M; Monberg, E M; Dimarcello, F V

    2011-08-15

    We describe a new multicore fiber (MCF) having seven single-mode cores arranged in a hexagonal array, exhibiting low crosstalk among the cores and low loss across the C and L bands. We experimentally demonstrate a record transmission capacity of 112 Tb/s over a 76.8-km MCF using space-division multiplexing and dense wavelength-division multiplexing (DWDM). Each core carries 160 107-Gb/s polarization-division multiplexed quadrature phase-shift keying (PDM-QPSK) channels on a 50-GHz grid in the C and L bands, resulting in an aggregate spectral efficiency of 14 b/s/Hz. We further investigate the impact of the inter-core crosstalk on a 107-Gb/s PDM-QPSK signal after transmitting through the center core of the MCF when all the 6 outer cores carry same-wavelength 107-Gb/s signals with equal powers, and discuss the system implications of core-to-core crosstalk on ultra-long-haul transmission. © 2011 Optical Society of America

  19. Detection of intestinal protozoa in paediatric patients with gastrointestinal symptoms by multiplex real-time PCR.

    Science.gov (United States)

    Maas, L; Dorigo-Zetsma, J W; de Groot, C J; Bouter, S; Plötz, F B; van Ewijk, B E

    2014-06-01

    The performance of a multiplex real-time PCR for the detection of Blastocystis, Dientamoeba fragilis, Giardia lamblia, Cryptosporidium species and Entamoeba species in faecal samples was evaluated in an observational prospective study. Paediatric patients (0-18 years) presenting with gastrointestinal symptoms and suspected of having enteroparasitic disease were included. A questionnaire on gastrointestinal symptoms and the chosen treatment was completed at the start of the study and after 6 weeks. Of 163 paediatric patients (mean age, 7.8 years), 114 (70%) had a PCR-positive faecal sample. D. fragilis was detected most frequently, in 101 patients, followed by Blastocystis in 49. In faecal samples of 47 patients, more than one protozoan was detected, mainly the combination of D. fragilis and Blastocystis. Reported gastrointestinal symptoms were abdominal pain (78%), nausea (30%), and altered bowel habits (28%). Eighty-nine of the PCR-positive patients were treated with antibiotics. A significant reduction in abdominal pain was observed both in treated and in untreated patients. This study demonstrated that multiplex real-time PCR detects a high percentage of intestinal protozoa in paediatric patients with gastrointestinal symptoms. However, interpretation and determination of the clinical relevance of a positive PCR result in this population are still difficult. © 2013 The Authors Clinical Microbiology and Infection © 2013 European Society of Clinical Microbiology and Infectious Diseases.

  20. Multiplex real-time PCR SYBR Green for detection and typing of group III Clostridium botulinum.

    Science.gov (United States)

    Anniballi, Fabrizio; Auricchio, Bruna; Delibato, Elisabetta; Antonacci, Monia; De Medici, Dario; Fenicia, Lucia

    2012-01-27

    Clostridium botulinum type C and type D belonging to the group III organisms, are mainly responsible for animal botulism outbreaks. Clinical signs alone are often insufficient to make a diagnosis of botulism and a laboratory confirmation is required. Laboratory confirmation can be performed by demonstrating the presence of botulinum neurotoxins in serum, gastrointestinal contents, liver, wound of sick or dead animals, or by demonstrating the presence of C. botulinum in gastrointestinal contents, liver, and wound. Demonstration of spores in gastrointestinal contents or tissue of animals with clinical signs indicative of botulism reinforces the clinical diagnosis. With the aim of detecting and typing C. botulinum group III organisms, a multiplex real-time PCR SYBR Green was developed and in-house validated. Selectivity, limit of detection, relative accuracy, relative specificity, relative sensitivity, and repeatability of the method were investigated. The multiplex real-time PCR SYBR green used showed a 100% selectivity, 100% relative accuracy, 100% relative specificity, 100% relative sensitivity and a limit of detection of 277 and 580 DNA copies for C. botulinum type C and C. botulinum type D, respectively. The method reported here represents a suitable tool for laboratory diagnosis of type C and D botulism and for testing a large number of samples collected during the animal botulism surveillance and prevention activities. Copyright © 2011 Elsevier B.V. All rights reserved.

  1. Temporal multiplexing for economical measurement of power versus time on NIF

    Energy Technology Data Exchange (ETDEWEB)

    Thomas, S.; Boyd, B.; Davis, D.T.; Hall, B.

    1996-10-01

    The researchers have designed an economical device to measure the power time history in the National Ignition Facility`s (NIF) 192 beam laser. The heart of the system is a commercial, high-speed, four-channel digitizer with a 15,000 point record length. Samples of several beams are taken with fiberoptic pickoffs, separated in time with appropriate fiberoptic delays and presented to high-speed vacuum photodiodes, which convert the samples to electrical signals for the digitizer. Amplitude and time multiplexing are used to cover the required dynamic range and to record 12 samples on the digitizer, making the cost per sample competitive with alternative approaches. Forty-eight digitizers can record the required three samples from each of the 192 beams. An additional similar but lower bandwidth system is used to record the backreflected light from the main laser amplifiers and elsewhere. The recording electronics are discussed in detail.

  2. Temporal multiplexing for economical measurement of power versus time on NIF

    International Nuclear Information System (INIS)

    Thomas, S.; Boyd, B.; Davis, D.T.; Hall, B.

    1996-10-01

    The researchers have designed an economical device to measure the power time history in the National Ignition Facility's (NIF) 192 beam laser. The heart of the system is a commercial, high-speed, four-channel digitizer with a 15,000 point record length. Samples of several beams are taken with fiberoptic pickoffs, separated in time with appropriate fiberoptic delays and presented to high-speed vacuum photodiodes, which convert the samples to electrical signals for the digitizer. Amplitude and time multiplexing are used to cover the required dynamic range and to record 12 samples on the digitizer, making the cost per sample competitive with alternative approaches. Forty-eight digitizers can record the required three samples from each of the 192 beams. An additional similar but lower bandwidth system is used to record the backreflected light from the main laser amplifiers and elsewhere. The recording electronics are discussed in detail

  3. Real-time multiplex PCR assay for detection of Yersinia pestis and Yersinia pseudotuberculosis.

    Science.gov (United States)

    Matero, Pirjo; Pasanen, Tanja; Laukkanen, Riikka; Tissari, Päivi; Tarkka, Eveliina; Vaara, Martti; Skurnik, Mikael

    2009-01-01

    A multiplex real-time polymerase chain reaction (PCR) assay was developed for the detection of Yersinia pestis and Yersinia pseudotuberculosis. The assay includes four primer pairs, two of which are specific for Y. pestis, one for Y. pestis and Y. pseudotuberculosis and one for bacteriophage lambda; the latter was used as an internal amplification control. The Y. pestis-specific target genes in the assay were ypo2088, a gene coding for a putative methyltransferase, and the pla gene coding for the plasminogen activator. In addition, the wzz gene was used as a target to specifically identify both Y. pestis and the closely related Y. pseudotuberculosis group. The primer and probe sets described for the different genes can be used either in single or in multiplex PCR assays because the individual probes were designed with different fluorochromes. The assays were found to be both sensitive and specific; the lower limit of the detection was 10-100 fg of extracted Y. pestis or Y. pseudotuberculosis total DNA. The sensitivity of the tetraplex assay was determined to be 1 cfu for the ypo2088 and pla probe labelled with FAM and JOE fluorescent dyes, respectively.

  4. Development of a multiplex real-time PCR assay for phylogenetic analysis of Uropathogenic Escherichia coli.

    Science.gov (United States)

    Hasanpour, Mojtaba; Najafi, Akram

    2017-06-01

    Uropathogenic Escherichia coli (UPEC) is among major pathogens causing 80-90% of all episodes of urinary tract infections (UTIs). Recently, E. coli strains are divided into eight main phylogenetic groups including A, B1, B2, C, D, E, F, and clade I. This study was aimed to develop a rapid, sensitive, and specific multiplex real time PCR method capable of detecting phylogenetic groups of E. coli strains. This study was carried out on E. coli strains (isolated from the patient with UTI) in which the presence of all seven target genes had been confirmed in our previous phylogenetic study. An EvaGreen-based singleplex and multiplex real-time PCR with melting curve analysis was designed for simultaneous detection and differentiation of these genes. The primers were selected mainly based on the production of amplicons with melting temperatures (T m ) ranging from 82°C to 93°C and temperature difference of more than 1.5°C between each peak.The multiplex real-time PCR assays that have been developed in the present study were successful in detecting the eight main phylogenetic groups. Seven distinct melting peaks were discriminated, with Tm value of 93±0.8 for arpA, 89.2±0.1for chuA, 86.5±0.1 for yjaA, 82.3±0.2 for TspE4C2, 87.8±0.1for trpAgpC, 85.4±0.6 for arpAgpE genes, and 91±0.5 for the internal control. To our knowledge, this study is the first melting curve-based real-time PCR assay developed for simultaneous and discrete detection of these seven target genes. Our findings showed that this assay has the potential to be a rapid, reliable and cost-effective alternative for routine phylotyping of E. coli strains. Copyright © 2017 Elsevier B.V. All rights reserved.

  5. The Time Division Multi-Channel Communication Model and the Correlative Protocol Based on Quantum Time Division Multi-Channel Communication

    International Nuclear Information System (INIS)

    Liu Xiao-Hui; Pei Chang-Xing; Nie Min

    2010-01-01

    Based on the classical time division multi-channel communication theory, we present a scheme of quantum time-division multi-channel communication (QTDMC). Moreover, the model of quantum time division switch (QTDS) and correlative protocol of QTDMC are proposed. The quantum bit error rate (QBER) is analyzed and the QBER simulation test is performed. The scheme shows that the QTDS can carry out multi-user communication through quantum channel, the QBER can also reach the reliability requirement of communication, and the protocol of QTDMC has high practicability and transplantable. The scheme of QTDS may play an important role in the establishment of quantum communication in a large scale in the future. (general)

  6. Time-division optical interconnects for local-area and micro-area networks

    Science.gov (United States)

    Krol, Mark F.; Boncek, Raymond K.; Johns, Steven T.; Stacy, John L.

    1991-12-01

    This report describes the development of an optical Time-Division Multiple-Access (TDMA) interconnect suitable for applications in local-area and micro-area networks. The advantages of using time-division techniques instead of frequency-division, wavelength-division, or code-division techniques in a shared-medium environment are discussed in detail. Furthermore, a detailed description of the TDMA architecture is presented along with various experiments pertaining to the actual components needed to implement the system. Finally, experimental data is presented for an actual optical TDMA test bed. The experimental data demonstrates the feasibility of the architecture, and shows that currently the system has the capability to accommodate up to 50 channels. The bit-error-rate per channel was measured to be less than 10(exp -9) for pseudo-random bit-sequences.

  7. Nucleic acid programmable protein array a just-in-time multiplexed protein expression and purification platform.

    Science.gov (United States)

    Qiu, Ji; LaBaer, Joshua

    2011-01-01

    Systematic study of proteins requires the availability of thousands of proteins in functional format. However, traditional recombinant protein expression and purification methods have many drawbacks for such study at the proteome level. We have developed an innovative in situ protein expression and capture system, namely NAPPA (nucleic acid programmable protein array), where C-terminal tagged proteins are expressed using an in vitro expression system and efficiently captured/purified by antitag antibodies coprinted at each spot. The NAPPA technology presented in this chapter enable researchers to produce and display fresh proteins just in time in a multiplexed high-throughput fashion and utilize them for various downstream biochemical researches of interest. This platform could revolutionize the field of functional proteomics with it ability to produce thousands of spatially separated proteins in high density with narrow dynamic rand of protein concentrations, reproducibly and functionally. Copyright © 2011 Elsevier Inc. All rights reserved.

  8. Dynamic Time Multiplexing Fabrication of Holographic Polymer Dispersed Liquid Crystals for Increased Wavelength Sensitivity

    Science.gov (United States)

    Fontecchio, Adam K. (Inventor); Rai, Kashma (Inventor)

    2017-01-01

    Described herein is a new holographic polymer dispersed liquid crystal (HPDLC) medium with broadband reflective properties, and a new technique for fabrication of broadband HPDLC mediums. The new technique involves dynamic variation of the holography setup during HPDLC formation, enabling the broadening of the HPDLC medium's wavelength response. Dynamic variation of the holography setup may include the rotation and/or translation of one or more motorized stages, allowing for time and spatial, or angular, multiplexing through variation of the incident angles of one or more laser beams on a pre-polymer mixture during manufacture. An HPDLC medium manufactured using these techniques exhibits improved optical response by reflecting a broadband spectrum of wavelengths. A new broadband holographic polymer dispersed liquid crystal thin film polymeric mirror stack with electrically-switchable beam steering capability is disclosed. XXXX Described herein is a new holographic polymer dispersed liquid crystal (HPDLC) medium with broadband reflective properties, and a new technique for fabrication of broadband 10 HPDLC mediums. The new technique involves dynamic variation of the holography setup during HPDLC formation, enabling the broadening of the HPDLC medium's wavelength response. Dynamic variation of the holography setup may include the rotation and/or translation of one or more 15 motorized stages, allowing for time and spatial, or angular, multiplexing through variation of the incident angles of one or more laser beams on a pre-polymer mixture during manufacture. An HPDLC medium manufactured using these techniques exhibits improved optical response by reflecting 20 a broadband spectrum of wavelengths. A new broadband holographic polymer dispersed liquid crystal thin film polymeric mirror stack with electrically switchable beam steering capability is disclosed.

  9. CRADA Final Report: Thermal Design and Analysis Tools for Dense-Wavelength-Division-Multiplexed (DWDM) Optical Networks

    Energy Technology Data Exchange (ETDEWEB)

    Hopkins, Deborah

    2005-01-31

    The current project originated from discussions with designers and engineers in the opto-electronics industry who sought help from LBNL in identifying effective thermal-management strategies for optical-network components and systems. Miniaturization of opto-electronic components exacerbates the thermal management problem because it allows a greater number of temperature-sensitive components to be fit into less space. Measurement techniques are required to evaluate emerging technologies, test prototype designs, and provide data that can be used to calibrate and validate models. To address these needs, LBNL and project partners developed a test station that allows experiments to be performed under tightly controlled conditions. The central component of the testing device is a "guarded" hot plate that enables high-precision temperature measurements, allowing forced-convection cooling devices to be evaluated. The device is so named because guard plates are used to eliminate heat flow and ensure that heat is not dissipated through the cooling device under investigation. This tool not only allows characterization of emerging technologies and materials, but also allows collection of high-resolution data that can be used to validate and improve simulation tools used to develop next-generation cooling devices for telecommunication systems. The ability to measure and analyze thermal performance benefits the photonics and optical-network industry by reducing development costs and time to market.

  10. Proposal for an ultracompact tunable wavelength-division-multiplexing optical filter based on quasi-2D photonic crystals

    International Nuclear Information System (INIS)

    Rostami, A; Haddadpour, A; Nazari, F; Alipour, H

    2010-01-01

    The concept of an ultracompact and narrowband optical communication filter based on a combination of 2D photonic and quasi-2D photonic crystals (Q-2-DPC) has been proposed. We utilized an array of 12-fold quasiphotonic crystals (PhC) as a defect part in a 2D PhC structure. We show that the designed filter has the ability to tune its central wavelengths (λ 0 ) by some parameters such as the radius of the rods in the Q-2-DPC section. Investigation of its properties has been done numerically by using the finite difference time domain (FDTD) method. The proposed filter has a cross section equal to 135.64 µm 2 and thus it is verified that this structure is very small and can be integrated easily into optical integrated circuits with nanophotonic technologies. Tuning of the central wavelength of the filter output channel is realized by deviating the radius of the Q-2-DPC and we can mention that the channel space of 0.9–1.5 nm and bandwidth of 0.6–2.6 nm is accomplished near the communication wavelength of 1550 nm. Also, in the desired structure, wavelength shifting is achieved by modifying the size of the specific holes in the 12-fold Q-2-DPC section. Finally, the simulation results show that the desired structure can be considered as a narrowband and tunable optical filter that is useful for WDM and DWDM communication applications

  11. Comparison of Real-Time Multiplex Human Papillomavirus (HPV) PCR Assays with INNO-LiPA HPV Genotyping Extra Assay▿

    OpenAIRE

    Else, Elizabeth A.; Swoyer, Ryan; Zhang, Yuhua; Taddeo, Frank J.; Bryan, Janine T.; Lawson, John; Van Hyfte, Inez; Roberts, Christine C.

    2011-01-01

    Real-time type-specific multiplex human papillomavirus (HPV) PCR assays were developed to detect HPV DNA in samples collected for the efficacy determination of the quadrivalent HPV (type 6, 11, 16, and 18) L1 virus-like particle (VLP) vaccine (Gardasil). Additional multiplex (L1, E6, and E7 open reading frame [ORF]) or duplex (E6 and E7 ORF) HPV PCR assays were developed to detect high-risk HPV types, including HPV type 31 (HPV31), HPV33, HPV35, HPV39, HPV45, HPV51, HPV52, HPV56, HPV58, and H...

  12. Relaxation time of the global order parameter on multiplex networks: The role of interlayer coupling in Kuramoto oscillators

    Science.gov (United States)

    Allen-Perkins, Alfonso; de Assis, Thiago Albuquerque; Pastor, Juan Manuel; Andrade, Roberto F. S.

    2017-10-01

    This work considers the time scales associated with the global order parameter and the interlayer synchronization of coupled Kuramoto oscillators on multiplexes. For two-layer multiplexes with an initially high degree of synchronization in each layer, the difference between the average phases in each layer is analyzed from two different perspectives: the spectral analysis and the nonlinear Kuramoto model. Both viewpoints confirm that the prior time scales are inversely proportional to the interlayer coupling strength. Thus, increasing the interlayer coupling always shortens the transient regimes of both the global order parameter and the interlayer synchronization. Surprisingly, the analytical results show that the convergence of the global order parameter is faster than the interlayer synchronization, and the latter is generally faster than the global synchronization of the multiplex. The formalism also outlines the effects of frequencies on the difference between the average phases of each layer, and it identifies the conditions for an oscillatory behavior. Computer simulations are in fairly good agreement with the analytical findings, and they reveal that the time scale of the global order parameter is half the size of the time scale of the multiplex, if not smaller.

  13. Simultaneous quantitative assessment of circulating cell-free mitochondrial and nuclear DNA by multiplex real-time PCR

    Directory of Open Access Journals (Sweden)

    Peng Xia

    2009-01-01

    Full Text Available Quantification of circulating nucleic acids in plasma and serum could be used as a non-invasive diagnostic tool for monitoring a wide variety of diseases and conditions. We describe here a rapid, simple and accurate multiplex real-time PCR method for direct synchronized analysis of circulating cell-free (ccf mitochondrial (mtDNA and nuclear (nDNA DNA in plasma and serum samples. The method is based on one-step multiplex real-time PCR using a FAM-labeled MGB probe and primers to amplify the mtDNA sequence of the ATP 8 gene, and a VIC-labeled MGB probe and primers to amplify the nDNA sequence of the glycerinaldehyde-3-phosphate-dehydrogenase (GAPDH gene, in plasma and serum samples simultaneously. The efficiencies of the multiplex assays were measured in serial dilutions. Based on the simulation of the PCR reaction kinetics, the relative quantities of ccf mtDNA were calculated using a very simple equation. Using our optimised real-time PCR conditions, close to 100% efficiency was obtained from the two assays. The two assays performed in the dilution series showed very good and reproducible correlation to each other. This optimised multiplex real-time PCR protocol can be widely used for synchronized quantification of mtDNA and nDNA in different samples, with a very high rate of efficiency.

  14. Real-time quantitative phase reconstruction in off-axis digital holography using multiplexing.

    Science.gov (United States)

    Girshovitz, Pinhas; Shaked, Natan T

    2014-04-15

    We present a new approach for obtaining significant speedup in the digital processing of extracting unwrapped phase profiles from off-axis digital holograms. The new technique digitally multiplexes two orthogonal off-axis holograms, where the digital reconstruction, including spatial filtering and two-dimensional phase unwrapping on a decreased number of pixels, can be performed on both holograms together, without redundant operations. Using this technique, we were able to reconstruct, for the first time to our knowledge, unwrapped phase profiles from off-axis holograms with 1 megapixel in more than 30 frames per second using a standard single-core personal computer on a MATLAB platform, without using graphic-processing-unit programming or parallel computing. This new technique is important for real-time quantitative visualization and measurements of highly dynamic samples and is applicable for a wide range of applications, including rapid biological cell imaging and real-time nondestructive testing. After comparing the speedups obtained by the new technique for holograms of various sizes, we present experimental results of real-time quantitative phase visualization of cells flowing rapidly through a microchannel.

  15. Evaluation of a multiplex real-time PCR assay for the detection of respiratory viruses in clinical specimens.

    Science.gov (United States)

    Rheem, Insoo; Park, Joowon; Kim, Tae-Hyun; Kim, Jong Wan

    2012-11-01

    In this study, we evaluated the analytical performance and clinical potential of a one-step multiplex real-time PCR assay for the simultaneous detection of 14 types of respiratory viruses using the AdvanSure RV real-time PCR Kit (LG Life Sciences, Korea). Three hundred and twenty clinical specimens were tested with the AdvanSure RV real-time PCR Kit and conventional multiplex reverse transcription (RT)-PCR assay. The assay results were analyzed and the one-step AdvanSure RV real-time PCR Kit was compared with the conventional multiplex RT-PCR assay with respect to the sensitivity and specificity of the detection of respiratory viruses. The limit of detection (LOD) was 1.31 plaque-forming units (PFU)/mL for human rhinoviruses (hRVs), 4.93 PFU/mL for human coronavirus HCoV-229E/NL63, 2.67 PFU/mL for human coronavirus HCoV-OC43, 18.20 PFU/mL for parainfluenza virus 1 (PIV)-1, 24.57 PFU/mL for PIV-2, 1.73 PFU/mL for PIV-3, 1.79 PFU/mL for influenza virus group (Flu) A, 59.51 PFU/mL for FluB, 5.46 PFU/mL for human respiratory syncytial virus (hRSV)-A, 17.23 PFU/mL for hRSV-B, 9.99 PFU/mL for human adenovirus (ADVs). The cross-reactivity test for this assay against 23 types of non-respiratory viruses showed negative results for all viruses tested. The agreement between the one-step AdvanSure multiplex real-time PCR assay and the conventional multiplex RT-PCR assay was 98%. The one-step AdvanSure RV multiplex real-time PCR assay is a simple assay with high potential for specific, rapid and sensitive laboratory diagnosis of respiratory viruses compared to conventional multiplex RT-PCR.

  16. A one-step real-time multiplex PCR for screening Y-chromosomal microdeletions without downstream amplicon size analysis.

    Directory of Open Access Journals (Sweden)

    Viviana Kozina

    Full Text Available BACKGROUND: Y-chromosomal microdeletions (YCMD are one of the major genetic causes for non-obstructive azoospermia. Genetic testing for YCMD by multiplex polymerase chain reaction (PCR is an established method for quick and robust screening of deletions in the AZF regions of the Y-chromosome. Multiplex PCRs have the advantage of including a control gene in every reaction and significantly reducing the number of reactions needed to screen the relevant genomic markers. PRINCIPAL FINDINGS: The widely established "EAA/EMQN best practice guidelines for molecular diagnosis of Y-chromosomal microdeletions (2004" were used as a basis for designing a real-time multiplex PCR system, in which the YCMD can simply be identified by their melting points. For this reason, some AZF primers were substituted by primers for regions in their genomic proximity, and the ZFX/ZFY control primer was exchanged by the AMELX/AMELY control primer. Furthermore, we substituted the classical SybrGreen I dye by the novel and high-performing DNA-binding dye EvaGreen™ and put substantial effort in titrating the primer combinations in respect to optimal melting peak separation and peak size. SIGNIFICANCE: With these changes, we were able to develop a platform-independent and robust real-time based multiplex PCR, which makes the need for amplicon identification by electrophoretic sizing expendable. By using an open-source system for real-time PCR analysis, we further demonstrate the applicability of automated melting point and YCMD detection.

  17. Children's Time Use: Labor Divisions and Schooling in Indonesia

    Science.gov (United States)

    Hsin, Amy

    2007-01-01

    Data from the Worker and Iron Status Evaluation are used to examine gendered patterns in children's time in market and nonmarket work, schooling, and leisure in Indonesia (N = 2,929). Boys spend more time in market work; girls spend more time in nonmarket work. Work responsibilities increase with age as well as gender differentials in children's…

  18. Development of capacitive multiplexing circuit for SiPM-based time-of-flight (TOF) PET detector.

    Science.gov (United States)

    Choe, Hyeok-Jun; Choi, Yong; Hu, Wei; Yan, Jianhua; Ho Jung, Jin

    2017-04-07

    There has been great interest in developing a time-of-flight (TOF) PET to improve the signal-to-noise ratio of PET image relative to that of non-TOF PET. Silicon photomultiplier (SiPM) arrays have attracted attention for use as a fast TOF PET photosensor. Since numerous SiPM arrays are needed to construct a modern human PET, a multiplexing method providing both good timing performance and high channel reduction capability is required to develop a SiPM-based TOF PET. The purpose of this study was to develop a capacitive multiplexing circuit for the SiPM-based TOF PET. The proposed multiplexing circuit was evaluated by measuring the coincidence resolving time (CRT) and the energy resolution as a function of the overvoltage using three different capacitor values of 15, 30, and 51 pF. A flood histogram was also obtained and quantitatively assessed. Experiments were performed using a [Formula: see text] array of [Formula: see text] mm 2 SiPMs. Regarding the capacitor values, the multiplexing circuit using a smaller capacitor value showed the best timing performance. On the other hand, the energy resolution and flood histogram quality of the multiplexing circuit deteriorated as the capacitor value became smaller. The proposed circuit was able to achieve a CRT of [Formula: see text] ps FWHM and an energy resolution of 17.1[Formula: see text] with a pair of [Formula: see text] mm 3 LYSO crystals using a capacitor value of 30 pF at an overvoltage of 3.0 V. It was also possible to clearly resolve a [Formula: see text] array of LYSO crystals in the flood histogram using the multiplexing circuit. The experiment results indicate that the proposed capacitive multiplexing circuit is useful to obtain an excellent timing performance and a crystal-resolving capability in the flood histogram with a minimal degradation of the energy resolution, as well as to reduce the number of the readout channels of the SiPM-based TOF PET detector.

  19. Multiplex recording of cellular events over time on CRISPR biological tape.

    Science.gov (United States)

    Sheth, Ravi U; Yim, Sung Sun; Wu, Felix L; Wang, Harris H

    2017-12-15

    Although dynamics underlie many biological processes, our ability to robustly and accurately profile time-varying biological signals and regulatory programs remains limited. Here we describe a framework for storing temporal biological information directly in the genomes of a cell population. We developed a "biological tape recorder" in which biological signals trigger intracellular DNA production that is then recorded by the CRISPR-Cas adaptation system. This approach enables stable recording over multiple days and accurate reconstruction of temporal and lineage information by sequencing CRISPR arrays. We further demonstrate a multiplexing strategy to simultaneously record the temporal availability of three metabolites (copper, trehalose, and fucose) in the environment of a cell population over time. This work enables the temporal measurement of dynamic cellular states and environmental changes and suggests new applications for chronicling biological events on a large scale. Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

  20. Multiplexing topologies and time scales: The gains and losses of synchrony

    Science.gov (United States)

    Makovkin, Sergey; Kumar, Anil; Zaikin, Alexey; Jalan, Sarika; Ivanchenko, Mikhail

    2017-11-01

    Inspired by the recent interest in collective dynamics of biological neural networks immersed in the glial cell medium, we investigate the frequency and phase order, i.e., Kuramoto type of synchronization in a multiplex two-layer network of phase oscillators of different time scales and topologies. One of them has a long-range connectivity, exemplified by the Erdős-Rényi random network, and supports both kinds of synchrony. The other is a locally coupled two-dimensional lattice that can reach frequency synchronization but lacks phase order. Drastically different layer frequencies disentangle intra- and interlayer synchronization. We find that an indirect but sufficiently strong coupling through the regular layer can induce both phase order in the originally nonsynchronized random layer and global order, even when an isolated regular layer does not manifest it in principle. At the same time, the route to global synchronization is complex: an initial onset of (partial) synchrony in the regular layer, when its intra- and interlayer coupling is increased, provokes the loss of synchrony even in the originally synchronized random layer. Ultimately, a developed asynchronous dynamics in both layers is abruptly taken over by the global synchrony of both kinds.

  1. Multiplex real-time PCR for detection of Campylobacter, Salmonella, and Shigella.

    Science.gov (United States)

    Barletta, F; Mercado, E H; Lluque, A; Ruiz, J; Cleary, T G; Ochoa, T J

    2013-09-01

    Infectious diarrhea can be classified based on its clinical presentation as noninflammatory or inflammatory disease. In developing countries, among inflammatory diarrhea cases, Shigella is the most common cause, followed by Campylobacter and Salmonella. Because the time frame in which treatment choices must be made is short and conventional stool cultures lack good sensitivity, there is a need for a rapid, sensitive, and inexpensive detection technique. The purpose of our study was to develop a multiplex real-time PCR procedure to simultaneously identify Campylobacter spp., Salmonella spp., and Shigella spp. Primers were designed to amplify the invA, ipaH, and 16S rRNA genes simultaneously in a single reaction to detect Salmonella, Shigella, and Campylobacter, respectively. Using this approach, we correctly identified 102 of 103 strains of the targeted enteropathogens and 34 of 34 other pathogens. The melting temperatures were 82.96 ± 0.05 °C for invA, 85.56 ± 0.28 °C for ipaH, and 89.21 ± 0.24 °C for 16S rRNA. The limit of accurate quantification for the assay in stool samples was 10(4) CFU g(-1); however, the limit of detection was 10(3) CFU g(-1). This assay is a simple, rapid, inexpensive, and reliable system for the practical detection of these three enteropathogens in clinical specimens.

  2. OTDM-to-WDM Conversion Based on Time-to-Frequency Mapping by Time-Domain Optical Fourier Transformation

    DEFF Research Database (Denmark)

    Palushani, Evarist; Mulvad, Hans Christian Hansen; Galili, Michael

    2012-01-01

    This paper reports on the utilization of the timedomain optical Fourier transformation (OFT) technique for serial-to-parallel conversion of optical time division multiplexed (OTDM) data tributaries into dense wavelength division multiplexed (DWDM) channels. The OFT is implemented by using...

  3. Multi-channel time-division integrator in HL-2A

    International Nuclear Information System (INIS)

    Yan Ji

    2008-01-01

    HL-2A is China's first Tokamak device with divertor configuration (magnetic confinement controlled nuclear fusion device). To find out the details of on-going fusion reaction at different times is of important significance in achieving controlled nuclear fusion. We developed a new type multi-channel time-division integrator for HL-2A. It has functions of automatic cutting off negative pulse of the input signals, optional integrating time division spacing 0.2-1 ms, TTL starting trigger signal, automatic regularly work 20 s, and integrating 10 channel at the same time. (authors)

  4. Coherence Multiplex System Topologies

    NARCIS (Netherlands)

    Meijerink, Arjan; Taniman, R.O.; Heideman, G.H.L.M.; van Etten, Wim

    2007-01-01

    Coherence multiplexing is a potentially inexpensive form of optical code-division multiple access, which is particularly suitable for short-range applications with moderate bandwidth requirements, such as access networks, LANs, or interconnects. Various topologies are known for constructing an

  5. Detection and quantification of Campylobacter jejuni and Campylobacter coli using real-time multiplex PCR.

    Science.gov (United States)

    Toplak, N; Kovač, M; Piskernik, S; Možina, S Smole; Jeršek, B

    2012-04-01

    We describe a real-time quantitative multiplex polymerase chain reaction (qmPCR) assay to identify and discriminate between isolates of Campylobacter jejuni and Campylobacter coli. Two novel sets of primers and hydrolysis probes were designed to amplify the unique DNA sequences within the hipO, ccoN and cadF genes that are specific to Camp. jejuni and Camp. coli. Using the designed optimized qmPCR assay conditions, the amplification efficiency is in range from 108 to 116%. These qmPCR assays are highly specific for Camp. jejuni and Camp. coli, as seen through testing of 40 Campylobacter strains and 17 non-Campylobacter strains. In chicken juice and tap water models spiked with known quantities of Camp. jejuni, qmPCR detected 10(2) -10(3) CFU ml(-1) within 4 h. The qmPCR assays developed in this study provide reliable and simultaneous detection and quantification of Camp. jejuni and Camp. coli, with good amplification reaction parameters. Following further validation, the qmPCR assay reported here has the potential to be applied to various sample types as an alternative and rapid methodology. © 2012 The Authors. Journal of Applied Microbiology © 2012 The Society for Applied Microbiology.

  6. Comparison of culture, single and multiplex real-time PCR for detection of Sabin poliovirus shedding in recently vaccinated Indian children.

    Science.gov (United States)

    Giri, Sidhartha; Rajan, Anand K; Kumar, Nirmal; Dhanapal, Pavithra; Venkatesan, Jayalakshmi; Iturriza-Gomara, Miren; Taniuchi, Mami; John, Jacob; Abraham, Asha Mary; Kang, Gagandeep

    2017-08-01

    Although, culture is considered the gold standard for poliovirus detection from stool samples, real-time PCR has emerged as a faster and more sensitive alternative. Detection of poliovirus from the stool of recently vaccinated children by culture, single and multiplex real-time PCR was compared. Of the 80 samples tested, 55 (68.75%) were positive by culture compared to 61 (76.25%) and 60 (75%) samples by the single and one step multiplex real-time PCR assays respectively. Real-time PCR (singleplex and multiplex) is more sensitive than culture for poliovirus detection in stool, although the difference was not statistically significant. © 2017 Wiley Periodicals, Inc.

  7. Development of a USB-based multi-channel time division scaler for HL-2A

    International Nuclear Information System (INIS)

    Liang Ping

    2008-01-01

    HL-2A is China's first Tokamak device with divertor configuration. Mastering the process and plasma parameter changes with time are of great significance to achieve controlled nuclear fusion. In the recent upgrading of HL-2A, for which a higher and faster electronic equipment was required, we developed a new type USB multi-channel time division scaler for HL-2A including functions: USB interface, PC graphical user interface, simultaneously calibrating more than five channel signals, optional time division spacing 2-50 ms, count rate up to over 2 MHz, accessing all the information 20 s after a activated signal, and processing data and displaying off-line. (authors)

  8. Use of multiplex real-time PCR for detection of common diarrhea causing protozoan parasites in Egypt.

    Science.gov (United States)

    Nazeer, John T; El Sayed Khalifa, Khalifa; von Thien, Heidrun; El-Sibaei, Mahmoud Mohamed; Abdel-Hamid, Magda Youssef; Tawfik, Ranya Ayman Samir; Tannich, Egbert

    2013-02-01

    Diarrhea is an important cause of morbidity and mortality, worldwide. Giardia intestinalis, Cryptosporidium spp., and Entamoeba histolytica are the most common diarrhea-causing parasitic protozoa. Diagnosis of these parasites is usually performed by microscopy. However, microscopy lacks sensitivity and specificity. Replacing microscopy with more sensitive and specific nucleic acid based methods is hampered by the higher costs, in particular in developing countries. Multiplexing the detection of more than one parasite in a single test by real-time polymerase chain reaction (PCR) has been found to be very effective and would decrease the cost of the test. In the present study, stool samples collected from 396 Egyptian patients complaining of diarrhea along with 202 faecal samples from healthy controls were examined microscopically by direct smear method and after concentration using formol-ethyl acetate. Frozen portions of the same samples were tested by multiplex real-time for simultaneous detection of E. histolytica, G. intestinalis, and Cryptosporidium spp. The results indicate that among diarrheal patients in Egypt G. intestinalis is the most common protozoan parasite, with prevalence rates of 30.5 and 37.1 %, depending on the method used (microscopy vs. multiplex real-time PCR). Cryptosporidium spp. was detected in 1 % of the diarrheal patients by microscopy and in 3 % by real-time PCR. While E. histolytica/dispar was detected in 10.8 % by microscopy, less than one fifth of them (2 %) were found true positive for Entamoeba dispar by real-time PCR. E. histolytica DNA was not detected in any of the diarrheal patients. In comparison with multiplex real-time PCR, microscopy exhibited many false positive and negative cases with the three parasites giving sensitivities and specificities of 100 and 91 % for E. histolytica/dispar, 57.8 and 85.5 % for G. intestinalis, and 33.3 and 100 % for Cryptosporidium spp.

  9. 5.8 Gb/s 16:1 multiplexer and 1:16 demultiplexer using 1.2 μm BiCMOS

    DEFF Research Database (Denmark)

    Midtgaard, Jacob; Svensson, C.

    1994-01-01

    High speed time-division multiplexers and demultiplexers are important components of modern optical communication systems. They are needed to parallelize the data to allow most of the system to operate at much lower speeds. This paper describes a 16:1 multiplexer and a 1:16 demultiplexer...

  10. Efficient compression of rearranged time-multiplexed elemental image arrays in MALT-based three-dimensional integral imaging

    Science.gov (United States)

    Kang, Ho-Hyun; Lee, Byung-Gook; Kim, Eun-Soo

    2011-06-01

    In this paper, an approach to efficiently compress the time-multiplexed EIAs picked up from the MALT-based integral imaging system is proposed. In this method, the time-multiplexed EIAs are rearranged by collecting the elemental images occupied at the same position in each EIA to enhance the similarity among the elemental images. Then, MPEG-4 is applied to these rearranged elemental images for compression. From the experimental results, it is shown that the average correlation quality ( ACQ) value representing a degree of similarity between the elemental images, and the resultant compression efficiency have been enhanced by 11.50% and 9.97%, respectively on the average for three kinds of test scenarios in the proposed method, compared to those of the conventional method. Good experimental results finally confirmed the feasibility of the proposed scheme.

  11. 75 FR 9442 - AK Steel Corporation, Mansfield Works Division, Including On-Site Leased Workers From Time...

    Science.gov (United States)

    2010-03-02

    ... Employment and Training Administration TA-W-71,375 AK Steel Corporation, Mansfield Works Division, Including... impacted employment at AK Steel Corporation, Mansfield Works Division, Mansfield, Ohio. The survey of the... Corporation, Mansfield Works Division, including on-site leased workers from Time Customized Staffing...

  12. Use of Multiplex Real-Time PCR To Diagnose Scrub Typhus.

    Science.gov (United States)

    Tantibhedhyangkul, Wiwit; Wongsawat, Ekkarat; Silpasakorn, Saowaluk; Waywa, Duangdao; Saenyasiri, Nuttawut; Suesuay, Jintapa; Thipmontree, Wilawan; Suputtamongkol, Yupin

    2017-05-01

    Scrub typhus, caused by Orientia tsutsugamushi , is a common cause of acute undifferentiated febrile illness in the Asia-Pacific region. However, its nonspecific clinical manifestation often prevents early diagnosis. We propose the use of PCR and serologic tests as diagnostic tools. Here, we developed a multiplex real-time PCR assay using hydrolysis (TaqMan) probes targeting O. tsutsugamushi 47-kDa, groEL , and human interferon beta (IFN-β gene) genes to improve early diagnosis of scrub typhus. The amplification efficiency was higher than 94%, and the lower detection limit was 10 copies per reaction. We used a human gene as an internal DNA quality and quantity control. To determine the sensitivity of this PCR assay, we selected patients with confirmed scrub typhus who exhibited a clear 4-fold increase in the level of IgG and/or IgM. The PCR assay result was positive in 45 of 52 patients, indicating a sensitivity of 86.5% (95% confidence interval [CI]: 74.2 to 94.4). The PCR assessment was negative for all 136 non-scrub typhus patients, indicating a specificity of 100% (95% CI: 97.3 to 100). In addition, this test helped diagnose patients with inconclusive immunofluorescence assay (IFA) results and using single blood samples. In conclusion, the real-time PCR assay proposed here is sensitive and specific in diagnosing scrub typhus. Combining PCR and serologic tests will improve the diagnosis of scrub typhus among patients presenting with acute febrile illness. Copyright © 2017 American Society for Microbiology.

  13. Rapid detection of carbapenemase genes by multiplex real-time PCR.

    Science.gov (United States)

    Monteiro, Jussimara; Widen, Raymond H; Pignatari, Antonio C C; Kubasek, Carly; Silbert, Suzane

    2012-04-01

    To develop a single multiplex real-time PCR assay to detect six different genetic types of carbapenemases already identified in Enterobacteriaceae (KPC, GES, NDM, IMP, VIM and OXA-48). A total of 58 bacterial isolates were tested. Thirty were previously characterized as resistant to carbapenems and documented by PCR and sequencing analysis to carry the following genes: bla(KPC) type, bla(GES) type, bla(IMP) type, bla(VIM) type, bla(OXA-48) and bla(NDM-1). These positive strains included 21 Enterobacteriaceae, 1 Acinetobacter baumannii and 8 Pseudomonas aeruginosa isolates. The remaining 28 isolates previously tested susceptible to carbapenems and were negative for these genes. Bacterial DNA was extracted using the easyMag extractor (bioMérieux, France). The real-time PCR was performed using the Rotor-Gene 6000 instrument (Corbett Life Science, Australia) and specific primers for each carbapenemase target were designed using the DNAStar software (Madison, WI, USA). Each one of the six carbapenemase genes tested presented a different melting curve after PCR amplification. The melting temperature (T(m)) analysis of the amplicons identified was as follows: bla(IMP) type (T(m) 80.1°C), bla(OXA-48) (T(m) 81.6°C), bla(NDM-1) (T(m) 84°C), bla(GES) type (T(m) 88.6°C), bla(VIM) type (T(m) 90.3°C) and bla(KPC) type (T(m) 91.6°C). No amplification was detected among the negative samples. The results showed 100% concordance with the genotypes previously identified. The new assay was able to detect the presence of six different carbapenemase gene types in a single 3 h PCR.

  14. High throughput multiplex real time PCR assay for the simultaneous quantification of DNA and RNA viruses infecting cassava plants

    OpenAIRE

    Otti, Gerald; Bouvaine, Sophie; Kimata, Bernadetha; Mkamillo, Geoffrey; Kumar, Lava; Tomlins, Keith; Maruthi, M.N.

    2016-01-01

    Aims: To develop a multiplex TaqMan-based real-time PCR assay (qPCR) for the simultaneous detection and quantification of both RNA and DNA viruses affecting cassava (Manihot esculenta) in eastern Africa.\\ud \\ud Methods and Results: The diagnostic assay was developed for two RNA viruses; Cassava brown streak virus (CBSV) and Uganda cassava brown streak virus (UCBSV) and two predominant DNA viruses; African cassava mosaic virus (ACMV) and East African cassava mosaic virus (EACMV), which cause t...

  15. A One-Step Real-Time Multiplex PCR for Screening Y-Chromosomal Microdeletions without Downstream Amplicon Size Analysis

    Science.gov (United States)

    Kozina, Viviana; Cappallo-Obermann, Heike; Gromoll, Jörg; Spiess, Andrej-Nikolai

    2011-01-01

    Backgound Y-chromosomal microdeletions (YCMD) are one of the major genetic causes for non-obstructive azoospermia. Genetic testing for YCMD by multiplex polymerase chain reaction (PCR) is an established method for quick and robust screening of deletions in the AZF regions of the Y-chromosome. Multiplex PCRs have the advantage of including a control gene in every reaction and significantly reducing the number of reactions needed to screen the relevant genomic markers. Principal Findings The widely established “EAA/EMQN best practice guidelines for molecular diagnosis of Y-chromosomal microdeletions (2004)” were used as a basis for designing a real-time multiplex PCR system, in which the YCMD can simply be identified by their melting points. For this reason, some AZF primers were substituted by primers for regions in their genomic proximity, and the ZFX/ZFY control primer was exchanged by the AMELX/AMELY control primer. Furthermore, we substituted the classical SybrGreen I dye by the novel and high-performing DNA-binding dye EvaGreen™ and put substantial effort in titrating the primer combinations in respect to optimal melting peak separation and peak size. Significance With these changes, we were able to develop a platform-independent and robust real-time based multiplex PCR, which makes the need for amplicon identification by electrophoretic sizing expendable. By using an open-source system for real-time PCR analysis, we further demonstrate the applicability of automated melting point and YCMD detection. PMID:21887237

  16. A multiplex real-time PCR assay for routine diagnosis of bacterial vaginosis

    NARCIS (Netherlands)

    Kusters, J. G.; Reuland, E. A.; Bouter, S.; Koenig, P.; Dorigo-Zetsma, J. W.

    2015-01-01

    A semi-quantitative multiplex PCR assay for the diagnosis of bacterial vaginosis (BV) was evaluated in a prospective study in a population of Dutch women with complaints of abnormal vaginal discharge. The PCR targets Gardnerella vaginalis, Atopobium vaginae, Megasphaera phylotype 1, Lactobacillus

  17. A novel immunochromatographic assay based on a time-resolved chemiluminescence strategy for the multiplexed detection of ractopamine and clenbuterol.

    Science.gov (United States)

    Wang, Wenwen; Su, Xiaoxiao; Ouyang, Hui; Wang, Lin; Fu, Zhifeng

    2016-04-21

    A novel multiplexed immunochromatographic assay (ICA) based on a time-resolved chemiluminescence (CL) strategy was developed for quantitative detection of β-agonists, by utilizing ractopamine (RAC) and clenbuterol (CLE) as the models. Different from conventional multiplexed ICA methods which usually require two or more test lines, this strategy was developed for detection of two β-agonists by using only one test line on the nitrocellulose membrane. In this study, horseradish peroxidase and alkaline phosphatase were used as the signal probes to label RAC antibody and CLE antibody, respectively. The two CL reactions with flash type and glow type kinetics characteristics were triggered simultaneously by injecting the coreactants, then the signals for RAC and CLE detections were recorded at 3 s and 300 s after coreactants injection, respectively. Owing to the utilization of CL detection, this protocol showed ideal sensitivity for quantitation. Under the optimal conditions, the detection limits for RAC and CLE were 0.17 ng mL(-1) and 0.067 ng mL(-1) (S/N = 3), respectively. The whole assay process can be accomplished within 20 min without complicated sample pretreatment. The proposed method was successfully applied for the detection of RAC and CLE in spiked swine urine. It opens up a new pathway for designing a low cost, time-efficiency and multiplexed strategy for rapid screening and field assay. Copyright © 2016 Elsevier B.V. All rights reserved.

  18. Development of a multiplex real-time PCR to quantify aflatoxin, ochratoxin A and patulin producing molds in foods.

    Science.gov (United States)

    Rodríguez, Alicia; Rodríguez, Mar; Andrade, María J; Córdoba, Juan J

    2012-04-02

    A multiplex real-time PCR (qPCR) method to quantify aflatoxin, ochratoxin A (OTA) and patulin producing molds in foods was developed. For this, the primer pairs F/R-omt, F/R-npstr and F/R-idhtrb and the TaqMan probes, OMTprobe, NPSprobe and IDHprobe targeting the omt-1, otanpsPN and idh genes involved in aflatoxin, OTA and patulin biosynthesis, respectively, were used. The functionality of the developed qPCR method was demonstrated by the high linear relationship of the standard curves constructed with the omt-1, otanpsPN and idh gene copies and threshold cycle (Ct) values for the respective producing molds tested to quantify aflatoxin, OTA and patulin producing molds. The ability of the optimized qPCR protocol to quantify producing molds was evaluated in different artificially inoculated foods (fruits, nuts, cereals and dry-ripened meat and cheese products). Efficiency values ranged from 81 to 110% in all inoculated foods. The detection limit was between 3 and 1logcfu/g for aflatoxin, OTA and patulin producing molds. The developed multiplex qPCR was shown be an appropriate tool for sensitive quantification of growth of toxigenic fungi in foods throughout the incubation time. Thus, the multiplex qPCR is a useful, rapid and efficient method to quantify simultaneously aflatoxin, OTA and patulin producing molds in food products. Copyright © 2012 Elsevier B.V. All rights reserved.

  19. Multiplex real-time PCR targeting the RNase P RNA gene for detection and identification of Candida species in blood.

    Science.gov (United States)

    Innings, Asa; Ullberg, Måns; Johansson, Anders; Rubin, Carl Johan; Noreus, Niklas; Isaksson, Magnus; Herrmann, Björn

    2007-03-01

    We have developed a single-tube multiplex real-time PCR method for the detection of the eight most common Candida species causing septicemia: Candida albicans, C. dubliniensis, C. famata, C. glabrata, C. guilliermondii, C. krusei, C. parapsilosis, and C. tropicalis. The method developed targets the RNase P RNA gene RPR1. Sequences of this gene were determined for seven of the Candida species and showed surprisingly large sequence variation. C. glabrata was found to have a gene that was five times longer gene than those of the other species, and the nucleotide sequence similarity between C. krusei and C. albicans was as low as 55%. The multiplex PCR contained three probes that enabled the specific detection of C. albicans, C. glabrata, and C. krusei and a fourth probe that allowed the general detection of the remaining species. The method was able to detect 1 to 10 genome copies when the detection limit was tested repeatedly for the four species C. albicans, C. glabrata, C. krusei, and C. guilliermondii. No significant difference in the detection limit was seen when the multiplex format was compared with single-species PCR, i.e., two primers and one probe. The method detected eight clinically relevant Candida species and did not react with other tested non-Candida species or human DNA. The assay was applied to 20 blood samples from nine patients and showed a sensitivity similar to that of culture.

  20. Big-Time College Sports: The Seductions and Frustrations of NCAA's Division I.

    Science.gov (United States)

    Oberlander, Susan; Lederman, Douglas

    1988-01-01

    Administrators at Southeast Missouri State University may gamble on a controversial public relations strategy that would depend on a big-time sports program to increase enrollment. Utica College, however, will return to the NCAA's Division III after spiraling sports costs and inability to gain entrance to a suitable conference. (MLW)

  1. Tests of the standard (30 hz) NCER FM multiplex telemetry system, augmented by two timing channels and a compensation reference signal, used to record multiplexed seismic network data on magnetic tape

    Science.gov (United States)

    Eaton, Jerry P.

    1976-01-01

    The application of subtractive compensation to USGS seismic magnetic tape recording and playback systems was examined in a recent USGS Open-file report (1). It was found, for the standard (30 Hz) NCER multiplex system, that subtractive compensation utilizing a 4688 Hz reference signal multiplexed onto each data track was more effective than that utilizing a 3125 Hz reference signal recorded separately on a different track. Moreover, it was found that the portion of the spectrum between the uppermost data channel (3060 Hz + or - 125 Hz) and the compensation reference signal (4688 Hz) could be used to record an additional timing signal, with a center frequency of 3700 Hz and a broader playback bandwidth (ca 0 to 100 Hz) than that of the standard data channels. Accordingly, for the tests described in that report, the standard 8-datachannel multiplex system was augmented by one additional timing channel with a center frequency of 3700 Hz. The 3700 Hz discriminator used in those tests was not successfully set up to utilize subtractive compensation; so its output from a tape playback was quite noisy. Subsequently, further tests have been carried out on the application of subtractive compensation to a 4-channel broad-band multiplex system and to the standard multiplex system, both recorded on field tape recorders with relatively poor tape speed control (2), (3). In the course of these experiments, it was discovered that two separate timing channe1s, not just one, can be inserted between the uppermost data channel and the compensation reference signal, Furthermore, it was possible to adjust the discriminators used to playback these timing channels so that they profited significantly from subtractive compensation even though the playback bandwidth was 0 to 100 Hz (for short rise times of square wave timing signals). The advantages of recording two timing signals on each data track include: 1) one standard time signal to be used for critical timing, e.g. IRIG E, can be

  2. Simultaneous detection of five notifiable viral diseases of cattle by single-tube multiplex real-time RT-PCR.

    Science.gov (United States)

    Wernike, Kerstin; Hoffmann, Bernd; Beer, Martin

    2015-06-01

    Multiplexed real-time PCR (qPCR) assays enable the detection of several target genes in a single reaction, which is applicable for simultaneous testing for the most important viral diseases in samples obtained from ruminants with unspecific clinical symptoms. Here, reverse transcription qPCR (RT-qPCR) systems for the detection of bovine viral diarrhoea virus (BVDV) and bluetongue virus (BTV) were combined with an internal control system based on the beta-actin gene. Additionally, a background screening for three further major pathogens of cloven-hoofed animals reportable to the World Organisation for Animal Health, namely foot-and-mouth disease virus, epizootic haemorrhagic disease virus, and Rift Valley fever virus, was integrated using the identical fluorophore for the respective RT-qPCR assays. Every pathogen-specific assay had an analytical sensitivity of at least 100 genome copies per reaction within the multiplex approach, and a series of reference samples and clinical specimens obtained from cattle, but also from small ruminants, were detected reliably. The qPCR systems integrated in the background screening were even not influenced by the simultaneous amplification of very high BVDV and BTV genome copy numbers. The newly developed multiplex qPCR allows the specific and sensitive detection of five of the most important diseases of ruminants and could be used in the context of monitoring programs or for differential diagnostics. Copyright © 2015 Elsevier B.V. All rights reserved.

  3. Reduced γ–γ time walk to below 50 ps using the multiplexed-start and multiplexed-stop fast-timing technique with LaBr3(Ce) detectors

    International Nuclear Information System (INIS)

    Régis, J.-M.; Saed-Samii, N.; Rudigier, M.; Ansari, S.; Dannhoff, M.; Esmaylzadeh, A.; Fransen, C.; Gerst, R.-B.; Jolie, J.; Karayonchev, V.; Müller-Gatermann, C.; Stegemann, S.

    2016-01-01

    The electronic γ–γ fast-timing technique using arrays consisting of many LaBr 3 (Ce) detectors is a powerful method to determine lifetimes of nuclear excited states with a lower limit of about 5 ps. This method requires the determination of the energy-dependent time walk of the zero time which is represented by the centroid of a prompt γ–γ time distribution. The full-energy peak versus full-energy peak prompt response difference which represents the linearly combined mean γ–γ time walk of a fast-timing array consisting of 8 LaBr 3 (Ce) detectors was measured using a standard 152 Eu γ-ray source for the energy region of 40–1408 keV. The data were acquired using a “multiplexed-start and multiplexed-stop” analogue electronics circuitry and analysed by employing the generalized centroid difference method. Concerning the cylindrical 1.5 in.×1.5 in. LaBr 3 (Ce) crystals which are coupled to the Hamamatsu R9779 photomultiplier tubes, the best fast-timing array time resolution of 202(3) ps is obtained for the two prompt γ lines of 60 Co by using the leading-edge timing principle. When using the zero-crossover timing principle the time resolution is degraded by up to 30%, dependent on the energy and the shaping delay time of the constant fraction discriminator model Ortec 935. The smallest γ–γ time walk to below 50 ps is obtained by using a shaping delay time of about 17 ns and an optimum “time-walk adjustment” needed for detector output pulses with amplitudes smaller than 400 mV.

  4. Low-peak-to-average power ratio and low-complexity asymmetrically clipped optical orthogonal frequency-division multiplexing uplink transmission scheme for long-reach passive optical network.

    Science.gov (United States)

    Zhou, Ji; Qiao, Yaojun

    2015-09-01

    In this Letter, we propose a discrete Hartley transform (DHT)-spread asymmetrically clipped optical orthogonal frequency-division multiplexing (DHT-S-ACO-OFDM) uplink transmission scheme in which the multiplexing/demultiplexing process also uses the DHT algorithm. By designing a simple encoding structure, the computational complexity of the transmitter can be reduced from O(Nlog(2)(N)) to O(N). At the probability of 10(-3), the peak-to-average power ratio (PAPR) of 2-ary pulse amplitude modulation (2-PAM)-modulated DHT-S-ACO-OFDM is approximately 9.7 dB lower than that of 2-PAM-modulated conventional ACO-OFDM. To verify the feasibility of the proposed scheme, a 4-Gbit/s DHT-S-ACO-OFDM uplink transmission scheme with a 1∶64 way split has been experimentally implemented using 100-km standard single-mode fiber (SSMF) for a long-reach passive optical network (LR-PON).

  5. Usefulness of Multiplex Real-Time PCR for Simultaneous Pathogen Detection and Resistance Profiling of Staphylococcal Bacteremia

    Directory of Open Access Journals (Sweden)

    Yousun Chung

    2016-01-01

    Full Text Available Staphylococci are the leading cause of nosocomial blood stream infections. Fast and accurate identification of staphylococci and confirmation of their methicillin resistance are crucial for immediate treatment with effective antibiotics. A multiplex real-time PCR assay that targets mecA, femA specific for S. aureus, femA specific for S. epidermidis, 16S rRNA for universal bacteria, and 16S rRNA specific for staphylococci was developed and evaluated with 290 clinical blood culture samples containing Gram-positive cocci in clusters (GPCC. For the 262 blood cultures identified to the species level with the MicroScan WalkAway system (Siemens Healthcare Diagnostics, USA, the direct real-time PCR assay of positive blood cultures showed very good agreement for the categorization of staphylococci into methicillin-resistant S. aureus (MRSA, methicillin-susceptible S. aureus (MSSA, methicillin-resistant S. epidermidis (MRSE, methicillin-susceptible S. epidermidis (MSSE, methicillin-resistant non-S. epidermidis CoNS (MRCoNS, and methicillin-susceptible non-S. epidermidis CoNS (MSCoNS (κ=0.9313. The direct multiplex real-time PCR assay of positive blood cultures containing GPCC can provide essential information at the critical point of infection with a turnaround time of no more than 4 h. Further studies should evaluate the clinical outcome of using this rapid real-time PCR assay in glycopeptide antibiotic therapy in clinical settings.

  6. A Comparative Study of Multiplexing Schemes for Next Generation Optical Access Networks

    Science.gov (United States)

    Imtiaz, Waqas A.; Khan, Yousaf; Shah, Pir Mehar Ali; Zeeshan, M.

    2014-09-01

    Passive optical network (PON) is a high bandwidth, economical solution which can provide the necessary bandwidth to end-users. Wavelength division multiplexed passive optical networks (WDM PONs) and time division multiplexed passive optical networks (TDM PONs) are considered as an evolutionary step for next-generation optical access (NGOA) networks. However they fail to provide highest transmission capacity, efficient bandwidth access, and robust dispersion tolerance. Thus future PONs are considered on simpler, efficient and potentially scalable, optical code division multiplexed (OCDM) PONs. This paper compares the performance of existing PONs with OCDM PON to determine a suitable scheme for NGOA networks. Two system parameter are used in this paper: fiber length, and bit rate. Performance analysis using Optisystem shows that; for a sufficient system performance parameters i.e. bit error rate (BER) ≤ 10-9, and maximum quality factor (Q) ≥ 6, OCDMA PON efficiently performs upto 50 km with 10 Gbit/s per ONU.

  7. Multiplex real-time PCR using SYBR® GreenER™ for the detection of DNA allergens in food.

    Science.gov (United States)

    Pafundo, Simona; Gullì, Mariolina; Marmiroli, Nelson

    2010-03-01

    We describe the development of a six-target real-time multiplex PCR assay with the SYBR® GreenER™ fluorescent dye, targeted to genes encoding for allergenic proteins commonly present in many processed food products (patent application pending). The assay was successfully trialled on reconstructed food matrices and on a range of commercial foodstuffs, and is proposed as a ready-to-use analytical tool for food manufacturers to detect the presence or confirm the absence of sequences encoding for important allergenic proteins of plant origin.

  8. A Multicarrier Multiplexing Method for Very Wide Bandwidth Transmission

    Directory of Open Access Journals (Sweden)

    Efthymoglou George

    2006-01-01

    Full Text Available The multicarrier orthogonal code division multiplexing (MC-OCDM introduced here has been designed for very wide bandwidth (VWB point-to-point and point-to-multipoint transmission. In order to meet VWB transmission requirements, the MC-OCDM design has two components, the basic and the composite. The basic MC-OCDM is a generalized form of the standard orthogonal frequency division multiplexing (OFDM. It has the property of distributing the power of each transmitted symbol into all subcarrier frequencies. Each subcarrier will then carry all transmitted symbols which are distinguished by orthogonal Hadamard sequences. The resulting system is shown to improve the performance of OFDM by introducing frequency and time diversity. As shown, by both analysis and simulation, the basic MC-OCDM combats the effects of narrowband interference (NBI. In particular, the simulation results show that the BER performance of the basic MC-OCDM in the presence of NBI is better than OFDM for both coded and uncoded systems. Furthermore, the composite MC-OCDM is a method of orthogonal frequency division multiplexing (OFDM basic MC-OCDM channels. This allows us to multiplex more than one basic MC-OCDM channel into a VWB transmission system which can have the performance and spectral efficiency required in fixed wireless transmission environments.

  9. Design and Evaluation of a Clock Multiplexing Circuit for the SSRL Booster Accelerator Timing System - Oral Presentation

    Energy Technology Data Exchange (ETDEWEB)

    Araya, Million; /SLAC

    2015-08-25

    SPEAR3 is a 234 m circular storage ring at SLAC’s synchrotron radiation facility (SSRL) in which a 3 GeV electron beam is stored for user access. Typically the electron beam decays with a time constant of approximately 10hr due to electron lose. In order to replenish the lost electrons, a booster synchrotron is used to accelerate fresh electrons up to 3GeV for injection into SPEAR3. In order to maintain a constant electron beam current of 500mA, the injection process occurs at 5 minute intervals. At these times the booster synchrotron accelerates electrons for injection at a 10Hz rate. A 10Hz 'injection ready' clock pulse train is generated when the booster synchrotron is operating. Between injection intervalswhere the booster is not running and hence the 10 Hz ‘injection ready’ signal is not present-a 10Hz clock is derived from the power line supplied by Pacific Gas and Electric (PG&E) to keep track of the injection timing. For this project I constructed a multiplexing circuit to 'switch' between the booster synchrotron 'injection ready' clock signal and PG&E based clock signal. The circuit uses digital IC components and is capable of making glitch-free transitions between the two clocks. This report details construction of a prototype multiplexing circuit including test results and suggests improvement opportunities for the final design.

  10. Design and Evaluation of a Clock Multiplexing Circuit for the SSRL Booster Accelerator Timing System - Final Paper

    Energy Technology Data Exchange (ETDEWEB)

    Araya, Million

    2015-08-21

    SPEAR3 is a 234 m circular storage ring at SLAC’s synchrotron radiation facility (SSRL) in which a 3 GeV electron beam is stored for user access. Typically the electron beam decays with a time constant of approximately 10hr due to electron lose. In order to replenish the lost electrons, a booster synchrotron is used to accelerate fresh electrons up to 3GeV for injection into SPEAR3. In order to maintain a constant electron beam current of 500mA, the injection process occurs at 5 minute intervals. At these times the booster synchrotron accelerates electrons for injection at a 10Hz rate. A 10Hz 'injection ready' clock pulse train is generated when the booster synchrotron is operating. Between injection intervals-where the booster is not running and hence the 10 Hz ‘injection ready’ signal is not present-a 10Hz clock is derived from the power line supplied by Pacific Gas and Electric (PG&E) to keep track of the injection timing. For this project I constructed a multiplexing circuit to 'switch' between the booster synchrotron 'injection ready' clock signal and PG&E based clock signal. The circuit uses digital IC components and is capable of making glitch-free transitions between the two clocks. This report details construction of a prototype multiplexing circuit including test results and suggests improvement opportunities for the final design.

  11. Multiplexing schemes for quantum repeater networks

    Science.gov (United States)

    Aparicio, Luciano; Van Meter, Rodney

    2011-08-01

    When built, quantum repeaters will allow the distribution of entangled quantum states across large distances, playing a vital part in many proposed quantum technologies. Enabling multiple users to connect through the same network will be key to their real-world deployment. Previous work on repeater technologies has focussed only on simple entanglment production, without considering the issues of resource scarcity and competition that necessarily arise in a network setting. In this paper we simulated a thirteen-node network with up to five flows sharing different parts of the network, measuring the total throughput and fairness for each case. Our results suggest that the Internet-like approach of statistical multiplexing use of a congested link gives the highest aggregate throughput. Time division multiplexing and buffer space multiplexing were slightly less effective, but all three schemes allow the sum of multiple flows to substantially exceed that of any one flow, improving over circuit switching by taking advantage of resources that are forced to remain idle in circuit switching. All three schemes proved to have excellent fairness. The high performance, fairness and simplicity of implementation support a recommendation of statistical multiplexing for shared quantum repeater networks.

  12. Species Identification of Fox-, Mink-, Dog-, and Rabbit-Derived Ingredients by Multiplex PCR and Real-Time PCR Assay.

    Science.gov (United States)

    Wu, Qingqing; Xiang, Shengnan; Wang, Wenjun; Zhao, Jinyan; Xia, Jinhua; Zhen, Yueran; Liu, Bang

    2017-10-25

    Various detection methods have been developed to date for identification of animal species. New techniques based on PCR approach have raised the hope of developing better identification methods, which can overcome the limitations of the existing methods. PCR-based methods used the mitochondrial DNA (mtDNA) as well as nuclear DNA sequences. In this study, by targeting nuclear DNA, multiplex PCR and real-time PCR methods were developed to assist with qualitative and quantitative analysis. The multiplex PCR was found to simultaneously and effectively distinguish four species (fox, dog, mink, and rabbit) ingredients by the different sizes of electrophoretic bands: 480, 317, 220, and 209 bp. Real-time fluorescent PCR's amplification profiles and standard curves showed good quantitative measurement responses and linearity, as indicated by good repeatability and coefficient of determination R 2  > 0.99. The quantitative results of quaternary DNA mixtures including mink, fox, dog, and rabbit DNA are in line with our expectations: R.D. (relative deviation) varied between 1.98 and 12.23% and R.S.D. (relative standard deviation) varied between 3.06 and 11.51%, both of which are well within the acceptance criterion of ≤ 25%. Combining the two methods is suitable for the rapid identification and accurate quantification of fox-, dog-, mink-, and rabbit-derived ingredients in the animal products.

  13. Detection and typing of highly pathogenic porcine reproductive and respiratory syndrome virus by multiplex real-time rt-PCR.

    Directory of Open Access Journals (Sweden)

    Kerstin Wernike

    Full Text Available Porcine reproductive and respiratory syndrome (PRRS causes economic losses in the pig industry worldwide, and PRRS viruses (PRRSV are classified into the two distinct genotypes "North American (NA, type 2" and "European (EU, type 1". In 2006, a highly pathogenic NA strain of PRRSV (HP-PRRSV, characterized by high fever as well as high morbidity and mortality, emerged in swine farms in China. Therefore, a real-time reverse transcription polymerase chain reaction (RT-qPCR assay specific for HP-PRRSV was developed and combined with type 1- and type 2-specific RT-qPCR systems. Furthermore, an internal control, based on a heterologous RNA, was successfully introduced. This final multiplex PRRSV RT-qPCR, detecting and typing PRRSV, had an analytical sensitivity of less than 200 copies per µl for the type 1-assay and 20 copies per µl for the type 2- and HP assays and a high diagnostic sensitivity. A panel of reference strains and field isolates was reliably detected and samples from an animal trial with a Chinese HP-PRRS strain were used for test validation. The new multiplex PRRSV RT-qPCR system allows for the first time the highly sensitive detection and rapid differentiation of PRRSV of both genotypes as well as the direct detection of HP-PRRSV.

  14. Strain measurement using multiplexed fiber optic sensors

    International Nuclear Information System (INIS)

    Kwon, Il Bum; Kim, Chi Yeop; Yoon, Dong Jin; Lee, Seung Seok

    2003-01-01

    FBG(Fiber Bragg grating) sensor, which is one of the fiber optic sensors for the application of smart structures, can not only measure one specific point but also multiple points by multiplexing techniques. We have proposed a novel multiplexing technique of FBG sensor by the intensity modulation of light source. This technique is applicable to WDM(Wavelength Division Multiplexing) technique and number of sensors in this system can be increased by using this technique with WDM technique.

  15. Penalty-free transmission at 10 Gbit/s through 40 cascaded 1-nm arrayed waveguide multiplexers

    DEFF Research Database (Denmark)

    Nissov, Morten; Jørgensen, Bo Foged; Pedersen, Rune Johan Skullerud

    1997-01-01

    Cascaded optical add-drop multiplexers (OADM) and optical cross connects (OXC) are key components in optical wavelength-division multiplex networks. OADMs with filtering of the passing signals and OXCs can be constructed by the use of wavelength-division multiplexers. Cascadability of multiplexers...

  16. Development of simple multiplex real-time PCR assays for foodborne pathogens detection and identification on LightCycler

    Directory of Open Access Journals (Sweden)

    Avo Karus1

    2017-03-01

    Full Text Available Most acute intestinal diseases are caused by food-borne pathogens. A fast and simple real-time PCR-based procedure for simultaneous detection of food contamination by any of the five food-borne pathogens: Campylobacter jejuni, Mycobacterium bovis, Enterobacter sakazaki, Shigella boydii, Clostridium perfrigens using multiplex EvaGreen real-time PCR for LightCycler was developed and evaluated. Real-time qPCR showed excellent sensitivity. Tm calling and Melting Curve Genotyping (MCG were used for analysis of PCR product melting curves. The Melting Curve Genotyping option showed good performance for discrimination of positive samples containing DNA of single pathogen or pathogen mixtures from negative samples.

  17. Adaptive Transmitter Precoding for Time Division Duplex CDMA in Fading Multipath Channels: Strategy and Analysis

    Directory of Open Access Journals (Sweden)

    Daryl Reynolds

    2003-01-01

    Full Text Available The recently developed blind adaptive techniques for multiuser detection in code division multiple access (CDMA systems offer an attractive compromise of performance and complexity. However, the desire to further reduce complexity at the mobile unit has led to the investigation of techniques that move signal processing from the mobile unit to the base station. In this paper, we investigate transmitter precoding for downlink time division duplex (TDD code division multiple access (CDMA communications. In particular, we develop a linear minimum mean square error precoding strategy using blind channel estimation for fading multipath channels that allows for simple matched filtering at the mobile unit and is easy to make adaptive. We also present a performance analysis using tools developed for the analysis of conventional (receiver-based linear blind multiuser detection in unknown channels. We compare the analytical and simulation results to traditional receiver-based blind multiuser detection. It is seen that transmitter precoding offers a reasonable alternative for TDD-mode CDMA when minimizing computational complexity at the mobile unit is a priority.

  18. Simultaneous detection of cow and buffalo species in milk from China, India, and Pakistan using multiplex real-time PCR.

    Science.gov (United States)

    Cottenet, G; Blancpain, C; Golay, P-A

    2011-08-01

    Asian countries are major producers of cow and buffalo milk. For quality and authenticity purposes, a multiplex real-time PCR assay was developed to specifically and simultaneously detect DNA from these 2 bovine species. Targeting the cytochrome b gene of mitochondrial DNA, common PCR primers amplified a 105-bp fragment, and 2 fluorescent probes specific to either cow or buffalo were designed for their identification. Specificity was successfully tested on 6 other species, including sheep and goat, and sensitivity reached 1% of cow DNA in buffalo DNA and vice versa. As an evaluation, the method was tested using 119 freeze-dried Asian milk samples from regional industrial milk facilities. Although these samples did not cover the entire Asian zone, the multiplex assay indicated that approximately 20% of the samples (mainly from India) showed high levels of cross-contamination of cow milk by buffalo milk, and vice versa. Fast, sensitive, and straightforward, this method is fit-for-purpose for the authenticity control of Asian milk. Copyright © 2011 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

  19. Timing the start of division in E. coli: a single-cell study

    Science.gov (United States)

    Reshes, G.; Vanounou, S.; Fishov, I.; Feingold, M.

    2008-12-01

    We monitor the shape dynamics of individual E. coli cells using time-lapse microscopy together with accurate image analysis. This allows measuring the dynamics of single-cell parameters throughout the cell cycle. In previous work, we have used this approach to characterize the main features of single-cell morphogenesis between successive divisions. Here, we focus on the behavior of the parameters that are related to cell division and study their variation over a population of 30 cells. In particular, we show that the single-cell data for the constriction width dynamics collapse onto a unique curve following appropriate rescaling of the corresponding variables. This suggests the presence of an underlying time scale that determines the rate at which the cell cycle advances in each individual cell. For the case of cell length dynamics a similar rescaling of variables emphasizes the presence of a breakpoint in the growth rate at the time when division starts, τc. We also find that the τc of individual cells is correlated with their generation time, τg, and inversely correlated with the corresponding length at birth, L0. Moreover, the extent of the T-period, τg - τc, is apparently independent of τg. The relations between τc, τg and L0 indicate possible compensation mechanisms that maintain cell length variability at about 10%. Similar behavior was observed for both fast-growing cells in a rich medium (LB) and for slower growth in a minimal medium (M9-glucose). To reveal the molecular mechanisms that lead to the observed organization of the cell cycle, we should further extend our approach to monitor the formation of the divisome.

  20. Preliminary Assessment of Microwave Readout Multiplexing Factor

    Energy Technology Data Exchange (ETDEWEB)

    Croce, Mark Philip [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Koehler, Katrina Elizabeth [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Rabin, Michael W. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Bennett, D. A. [National Inst. of Standards and Technology (NIST), Boulder, CO (United States); Mates, J. A. B. [National Inst. of Standards and Technology (NIST), Boulder, CO (United States); Gard, J. D. [National Inst. of Standards and Technology (NIST), Boulder, CO (United States); Becker, D. [National Inst. of Standards and Technology (NIST), Boulder, CO (United States); Schmidt, D. R. [National Inst. of Standards and Technology (NIST), Boulder, CO (United States); Ullom, J. N. [National Inst. of Standards and Technology (NIST), Boulder, CO (United States)

    2017-01-23

    Ultra-high resolution microcalorimeter gamma spectroscopy is a new non-destructive assay technology for measurement of plutonium isotopic composition, with the potential to reduce total measurement uncertainty to a level competitive with destructive analysis methods [1-4]. Achieving this level of performance in practical applications requires not only the energy resolution now routinely achieved with transition-edge sensor microcalorimeter arrays (an order of magnitude better than for germanium detectors) but also high throughput. Microcalorimeter gamma spectrometers have not yet achieved detection efficiency and count rate capability that is comparable to germanium detectors, largely because of limits from existing readout technology. Microcalorimeter detectors must be operated at low temperature to achieve their exceptional energy resolution. Although the typical 100 mK operating temperatures can be achieved with reliable, cryogen-free systems, the cryogenic complexity and heat load from individual readout channels for large sensor arrays is prohibitive. Multiplexing is required for practical systems. The most mature multiplexing technology at present is time-division multiplexing (TDM) [3, 5-6]. In TDM, the sensor outputs are switched by applying bias current to one SQUID amplifier at a time. Transition-edge sensor (TES) microcalorimeter arrays as large as 256 pixels have been developed for X-ray and gamma-ray spectroscopy using TDM technology. Due to bandwidth limits and noise scaling, TDM is limited to a maximum multiplexing factor of approximately 32-40 sensors on one readout line [8]. Increasing the size of microcalorimeter arrays above the kilopixel scale, required to match the throughput of germanium detectors, requires the development of a new readout technology with a much higher multiplexing factor.

  1. A Theoretical Study and Numerical Simulation of a Quasi-Distributed Sensor Based on the Low-Finesse Fabry-Perot Interferometer: Frequency-Division Multiplexing.

    Science.gov (United States)

    Guillen Bonilla, José Trinidad; Guillen Bonilla, Alex; Rodríguez Betancourtt, Verónica M; Guillen Bonilla, Héctor; Casillas Zamora, Antonio

    2017-04-14

    The application of the sensor optical fibers in the areas of scientific instrumentation and industrial instrumentation is very attractive due to its numerous advantages. In the industry of civil engineering for example, quasi-distributed sensors made with optical fiber are used for reliable strain and temperature measurements. Here, a quasi-distributed sensor in the frequency domain is discussed. The sensor consists of a series of low-finesse Fabry-Perot interferometers where each Fabry-Perot interferometer acts as a local sensor. Fabry-Perot interferometers are formed by pairs of identical low reflective Bragg gratings imprinted in a single mode fiber. All interferometer sensors have different cavity length, provoking frequency-domain multiplexing. The optical signal represents the superposition of all interference patterns which can be decomposed using the Fourier transform. The frequency spectrum was analyzed and sensor's properties were defined. Following that, a quasi-distributed sensor was numerically simulated. Our sensor simulation considers sensor properties, signal processing, noise system, and instrumentation. The numerical results show the behavior of resolution vs. signal-to-noise ratio. From our results, the Fabry-Perot sensor has high resolution and low resolution. Both resolutions are conceivable because the Fourier Domain Phase Analysis (FDPA) algorithm elaborates two evaluations of Bragg wavelength shift.

  2. Mitigation of Beat Noise in Time Wavelength Optical Code-Division Multiple-Access Systems

    Science.gov (United States)

    Bazan, Taher M.; Harle, David; Andonovic, Ivan

    2006-11-01

    This paper presents an analysis of two methods for enhancing the performance of two-dimensional time wavelength Optical code-division multiple-access systems by mitigating the effects of beat noise. The first methodology makes use of an optical hard limiter (OHL) in the receiver prior to the optical correlator; a general formula for the error probability as a function of crosstalk level for systems adopting OHLs is given, and the implications of the OHL's nonideal transfer characteristics are then examined. The second approach adopts pulse position modulation, and system performance is estimated and compared to that associated with on off keying.

  3. Detection of HPV and co-infecting pathogens in healthy Italian women by multiplex real-time PCR.

    Science.gov (United States)

    Camporiondo, Maria Pia; Farchi, Francesca; Ciccozzi, Massimo; Denaro, Aurelia; Gallone, Domenica; Maracchioni, Fabio; Favalli, Cartesio; Ciotti, Marco

    2016-01-01

    Several pathogens can be transmitted sexually and are an important cause of morbidity among sexually active women. The aim of the study was to detect the presence of human papillomavirus (HPV), Chlamydia trachomatis (CT), Neisseria gonorrhoeae (NG), Trichomonas vaginalis (TV), Mycoplasma hominis (MH), Mycoplasma genitalium (MG), Ureaplasma urealyticum (UU), and Ureaplasma parvum (UP) in a group of 309 healthy women enrolled at the San Camillo - Forlanini hospital of Rome by using two multiplex real-time PCR assays based on TOCE® technology. The women's ages ranged from 34 to 60 years, median 49 [IQR 45-54]. Of the 309 women tested, HPV DNA was detected in 77/309 (24.9%) patients. Of these, 44 (14.2%) harboured a single infection while 33 (10.7%) were infected by multiple genotypes. Prevalence of HPV infection was highest among females aged 40-50 years (15.2%). Of the other pathogens sought, CT, MG and NG were not detected while positive results were found for MH (12/309, 3.9%), TV (4/309, 1.3%), UP (89/309, 28.8%) and UU (14/309, 4.5%). Co-infections were as follows: 5 MH/HPV, 4 TV/HPV, 34 UP/HPV and 9 UU/HPV. In HPV-positive women, the probability of being infected by UP and UU was 2.5 (p=0.00045) and 6 fold higher (p=0.0016) than in HPV-negative women. The study supports the use of multiplex real-time PCR assays in a routine diagnostic setting. The high sensitivity and specificity of these assays along with the simultaneous detection of the most common sexually transmitted pathogens confers an advantage with respect to more obsolete methods reducing costs and time to diagnosis.

  4. Methods and Apparatus for Aggregation of Multiple Pulse Code Modulation Channels into a Signal Time Division Multiplexing Stream

    Science.gov (United States)

    Chang, Chen J. (Inventor); Liaghati, Jr., Amir L. (Inventor); Liaghati, Mahsa L. (Inventor)

    2018-01-01

    Methods and apparatus are provided for telemetry processing using a telemetry processor. The telemetry processor can include a plurality of communications interfaces, a computer processor, and data storage. The telemetry processor can buffer sensor data by: receiving a frame of sensor data using a first communications interface and clock data using a second communications interface, receiving an end of frame signal using a third communications interface, and storing the received frame of sensor data in the data storage. After buffering the sensor data, the telemetry processor can generate an encapsulated data packet including a single encapsulated data packet header, the buffered sensor data, and identifiers identifying telemetry devices that provided the sensor data. A format of the encapsulated data packet can comply with a Consultative Committee for Space Data Systems (CCSDS) standard. The telemetry processor can send the encapsulated data packet using a fourth and a fifth communications interfaces.

  5. Analogue multiplexer

    International Nuclear Information System (INIS)

    Gorshkov, V.A.; Kuznetsov, A.N.

    1980-01-01

    In systems of signal recording from several parallel spectrometric channels one can considerably reduce the total apparatus volume using a special unit - an analog multiplexer. A description of the multiplexer in the CAMAC system on the base of fast linear gating circuits which allows one analog-to-code converter to attend four spectrometric channels is given. On the example of the 4-channel spectrometer the logics of interaction of the multiple with analog-to-digital coxernver and signal recorder is shown. Electrical and functional multiplexer flow-sheets are given and its main characteristics are presented

  6. Development of a multiplex real-time RT-PCR assay for simultaneous detection of dengue and chikungunya viruses.

    Science.gov (United States)

    Cecilia, D; Kakade, M; Alagarasu, K; Patil, J; Salunke, A; Parashar, D; Shah, P S

    2015-01-01

    Dengue and chikungunya viruses co-circulate and cause infections that start with similar symptoms but progress to radically different outcomes. Therefore, an early diagnostic test that can differentiate between the two is needed. A single-step multiplex real-time RT-PCR assay was developed that can simultaneously detect and quantitate RNA of all dengue virus (DENV) serotypes and chikungunya virus (CHIKV). The sensitivity was 100 % for DENV and 95.8 % for CHIKV, whilst the specificity was 100 % for both viruses when compared with conventional RT-PCR. The detection limit ranged from 1 to 50 plaque-forming units. The assay was successfully used for differential diagnosis of dengue and chikungunya in Pune, where the viruses co-circulate.

  7. Development of a qualitative, multiplex real-time PCR kit for screening of genetically modified organisms (GMOs).

    Science.gov (United States)

    Dörries, Hans-Henno; Remus, Ivonne; Grönewald, Astrid; Grönewald, Cordt; Berghof-Jäger, Kornelia

    2010-03-01

    The number of commercially available genetically modified organisms (GMOs) and therefore the diversity of possible target sequences for molecular detection techniques are constantly increasing. As a result, GMO laboratories and the food production industry currently are forced to apply many different methods to reliably test raw material and complex processed food products. Screening methods have become more and more relevant to minimize the analytical effort and to make a preselection for further analysis (e.g., specific identification or quantification of the GMO). A multiplex real-time PCR kit was developed to detect the 35S promoter of the cauliflower mosaic virus, the terminator of the nopaline synthase gene of Agrobacterium tumefaciens, the 35S promoter from the figwort mosaic virus, and the bar gene of the soil bacterium Streptomyces hygroscopicus as the most widely used sequences in GMOs. The kit contains a second assay for the detection of plant-derived DNA to control the quality of the often processed and refined sample material. Additionally, the plant-specific assay comprises a homologous internal amplification control for inhibition control. The determined limits of detection for the five assays were 10 target copies/reaction. No amplification products were observed with DNAs of 26 bacterial species, 25 yeasts, 13 molds, and 41 not genetically modified plants. The specificity of the assays was further demonstrated to be 100% by the specific amplification of DNA derived from reference material from 22 genetically modified crops. The applicability of the kit in routine laboratory use was verified by testing of 50 spiked and unspiked food products. The herein described kit represents a simple and sensitive GMO screening method for the reliable detection of multiple GMO-specific target sequences in a multiplex real-time PCR reaction.

  8. A study on structural changes in protein by time-division type Laue method

    International Nuclear Information System (INIS)

    Morimoto, Hideki

    1995-01-01

    In order to know the physiological roles of proteins, it is important to investigate the intermediate states of their structural changes. The sizes of proteins are generally several tens angstrom(A). Considering the resolution, only x-ray crystal analysis can be used in practice for the investigation of the mechanism of protein structural changes, though NMR is applicable only for small-sized proteins. However, x-ray analysis is not so suitable for analysis of their intermediate states. Thus, the author paid attention to the time-division type Laue method for the study of hemoglobin (Hb). Laser-flash induces to release carbonmonooxide (CO) from carboxyhemoglobin (Hb(CO) 4 ). Therefore, if an appropriate length of x-ray pulse (∼100 picosec) is available, the processes in the period from cleavage of the bond between a ligand (O 2 , CO or NO) and Hb to recombination of them might be monitored. Using DNA recombination and chemical modification techniques, recombinant Hb, of which T structure is stable was produced. An investigation on the conditions which allow to release CO from the Hb is undertaken using a single crystal of this Hb. The experimental systems applicable to time-division type Laue method are some protein molecules participating in chemical reactions inducible by light absorption, the electron-transfer system excited by light and so on. (M.N.)

  9. Multipurpose assessment for the quantification of Vibrio spp. and total bacteria in fish and seawater using multiplex real-time polymerase chain reaction.

    Science.gov (United States)

    Kim, Ji Yeun; Lee, Jung-Lim

    2014-10-01

    This study describes the first multiplex real-time polymerase chain reaction assay developed, as a multipurpose assessment, for the simultaneous quantification of total bacteria and three Vibrio spp. (V. parahaemolyticus, V. vulnificus and V. anguillarum) in fish and seawater. The consumption of raw finfish as sushi or sashimi has been increasing the chance of Vibrio outbreaks in consumers. Freshness and quality of fishery products also depend on the total bacterial populations present. The detection sensitivity of the specific targets for the multiplex assay was 1 CFU mL⁻¹ in pure culture and seawater, and 10 CFU g⁻¹ in fish. While total bacterial counts by the multiplex assay were similar to those obtained by cultural methods, the levels of Vibrio detected by the multiplex assay were generally higher than by cultural methods of the same populations. Among the natural samples without Vibrio spp. inoculation, eight out of 10 seawater and three out of 20 fish samples were determined to contain Vibrio spp. Our data demonstrate that this multiplex assay could be useful for the rapid detection and quantification of Vibrio spp. and total bacteria as a multipurpose tool for surveillance of fish and water quality as well as diagnostic method. © 2014 The Authors. Journal of the Science of Food and Agriculture published by JohnWiley & Sons Ltd on behalf of Society of Chemical Industry.

  10. Multipurpose assessment for the quantification of Vibrio spp. and total bacteria in fish and seawater using multiplex real-time polymerase chain reaction

    Science.gov (United States)

    Kim, Ji Yeun; Lee, Jung-Lim

    2014-01-01

    Background This study describes the first multiplex real-time polymerase chain reaction assay developed, as a multipurpose assessment, for the simultaneous quantification of total bacteria and three Vibrio spp. (V. parahaemolyticus, V. vulnificus and V. anguillarum) in fish and seawater. The consumption of raw finfish as sushi or sashimi has been increasing the chance of Vibrio outbreaks in consumers. Freshness and quality of fishery products also depend on the total bacterial populations present. Results The detection sensitivity of the specific targets for the multiplex assay was 1 CFU mL−1 in pure culture and seawater, and 10 CFU g−1 in fish. While total bacterial counts by the multiplex assay were similar to those obtained by cultural methods, the levels of Vibrio detected by the multiplex assay were generally higher than by cultural methods of the same populations. Among the natural samples without Vibrio spp. inoculation, eight out of 10 seawater and three out of 20 fish samples were determined to contain Vibrio spp. Conclusion Our data demonstrate that this multiplex assay could be useful for the rapid detection and quantification of Vibrio spp. and total bacteria as a multipurpose tool for surveillance of fish and water quality as well as diagnostic method. © 2014 The Authors. Journal of the Science of Food and Agriculture published by JohnWiley & Sons Ltd on behalf of Society of Chemical Industry. PMID:24752974

  11. Multiplex real-time PCR for detection, identification and quantification of 'Candidatus Liberibacter solanacearum' in potato plants with zebra chip.

    Science.gov (United States)

    Li, Wenbin; Abad, Jorge A; French-Monar, Ronald D; Rascoe, John; Wen, Aimin; Gudmestad, Neil C; Secor, Gary A; Lee, Ing-Ming; Duan, Yongping; Levy, Laurene

    2009-07-01

    The new Liberibacter species, 'Candidatus Liberibacter solanacearum' (Lso) recently associated with potato/tomato psyllid-transmitted diseases in tomato and capsicum in New Zealand, was found to be consistently associated with a newly emerging potato zebra chip (ZC) disease in Texas and other southwestern states in the USA. A species-specific primer LsoF was developed for both quantitative real-time PCR (qPCR) and conventional PCR (cPCR) to detect and quantify Lso in infected samples. In multiplex qPCR, a plant cytochrome oxidase (COX)-based probe-primer set was used as a positive internal control for host plants, which could be used to reliably access the DNA extraction quality and to normalize qPCR data for accurate quantification of the bacterial populations in environment samples. Neither the qPCR nor the cPCR using the primer and/or probe sets with LsoF reacted with other Liberibacter species infecting citrus or other potato pathogens. The low detection limit of the multiplex qPCR was about 20 copies of the target 16S rDNA templates per reaction for field samples. Lso was readily detected and quantified in various tissues of ZC-affected potato plants collected from fields in Texas. A thorough but uneven colonization of Lso was revealed in various tissues of potato plants. The highest Lso populations were about 3x10(8) genomes/g tissue in the root, which were 3-order higher than those in the above-ground tissues of potato plants. The Lso bacterial populations were normally distributed across the ZC-affected potato plants collected from fields in Texas, with 60% of ZC-affected potato plants harboring an average Lso population from 10(5) to 10(6) genomes/g tissue, 4% of plants hosting above 10(7) Lso genomes/g tissue, and 8% of plants holding below 10(3) Lso genomes/g tissue. The rapid, sensitive, specific and reliable multiplex qPCR showed its potential to become a powerful tool for early detection and quantification of the new Liberibacter species associated

  12. Timing of Tissue-specific Cell Division Requires a Differential Onset of Zygotic Transcription during Metazoan Embryogenesis*

    Science.gov (United States)

    Wong, Ming-Kin; Guan, Daogang; Ng, Kaoru Hon Chun; Ho, Vincy Wing Sze; An, Xiaomeng; Li, Runsheng; Ren, Xiaoliang

    2016-01-01

    Metazoan development demands not only precise cell fate differentiation but also accurate timing of cell division to ensure proper development. How cell divisions are temporally coordinated during development is poorly understood. Caenorhabditis elegans embryogenesis provides an excellent opportunity to study this coordination due to its invariant development and widespread division asynchronies. One of the most pronounced asynchronies is a significant delay of cell division in two endoderm progenitor cells, Ea and Ep, hereafter referred to as E2, relative to its cousins that mainly develop into mesoderm organs and tissues. To unravel the genetic control over the endoderm-specific E2 division timing, a total of 822 essential and conserved genes were knocked down using RNAi followed by quantification of cell cycle lengths using in toto imaging of C. elegans embryogenesis and automated lineage. Intriguingly, knockdown of numerous genes encoding the components of general transcription pathway or its regulatory factors leads to a significant reduction in the E2 cell cycle length but an increase in cell cycle length of the remaining cells, indicating a differential requirement of transcription for division timing between the two. Analysis of lineage-specific RNA-seq data demonstrates an earlier onset of transcription in endoderm than in other germ layers, the timing of which coincides with the birth of E2, supporting the notion that the endoderm-specific delay in E2 division timing demands robust zygotic transcription. The reduction in E2 cell cycle length is frequently associated with cell migration defect and gastrulation failure. The results suggest that a tissue-specific transcriptional activation is required to coordinate fate differentiation, division timing, and cell migration to ensure proper development. PMID:27056332

  13. Time-domain multiplexed high resolution fiber optics strain sensor system based on temporal response of fiber Fabry-Perot interferometers.

    Science.gov (United States)

    Chen, Jiageng; Liu, Qingwen; He, Zuyuan

    2017-09-04

    We developed a multiplexed strain sensor system with high resolution using fiber Fabry-Perot interferometers (FFPI) as sensing elements. The temporal responses of the FFPIs excited by rectangular laser pulses are used to obtain the strain applied on each FFPI. The FFPIs are connected by cascaded couplers and delay fiber rolls for the time-domain multiplexing. A compact optoelectronic system performing closed-loop cyclic interrogation is employed to improve the sensing resolution and the frequency response. In the demonstration experiment, 3-channel strain sensing with resolutions better than 0.1 nε and frequency response higher than 100 Hz is realized.

  14. Time-Domain Optical Fourier Transformation for OTDM-DWDM and DWDM-OTDM Conversion

    DEFF Research Database (Denmark)

    Mulvad, Hans Christian Hansen; Palushani, Evarist; Galili, Michael

    2011-01-01

    Applications of time-domain optical Fourier transformation (OFT) in ultra-high-speed optical time-division multiplexed systems (OTDM) are reviewed, with emphasis on the recent demonstrations of OFT-based conversion between the OTDM and DWDM formats.......Applications of time-domain optical Fourier transformation (OFT) in ultra-high-speed optical time-division multiplexed systems (OTDM) are reviewed, with emphasis on the recent demonstrations of OFT-based conversion between the OTDM and DWDM formats....

  15. A multiplex real-time PCR for the detection and differentiation of Campylobacter phages.

    Directory of Open Access Journals (Sweden)

    Claudia Jäckel

    Full Text Available Campylobacter jejuni and C. coli are important food-borne pathogens that are widespread in animal husbandry. To combat Campylobacter along the food chain, the application of lytic phages has been shown to be a promising tool. Campylobacter phages are currently classified into three groups, of which group II and group III phages are the most common. Members of each group are closely related, whereas the two groups share only little DNA similarity. Moreover, while group III phages are specific for C. jejuni, group II phages additionally infect C. coli. Phage cocktails intended to be used for applications should be composed of various phages that differ in their host range and growth kinetics. The isolation of phages is generally performed by plaque assays. This approach has the limitation that phages are merely identified by their lytic activity on certain indicator strains and that relatively high numbers of phages must be present in a tested sample. Therefore, a more sensitive molecular detection system would be beneficial, which allows a pre-screening of samples and the quick detection and discrimination of group II and group III phages. New phages can then be isolated by use of indicator strains that may be different from those typically applied. On the basis of available Campylobacter phage genome sequences, we developed a multiplex PCR system for group II and group III phages selecting the tail tube gene and the gene for the base plate wedge, respectively, as target. Phages of both groups could be identified with primers deduced from the putative tail fiber gene. Efficient release of phage DNA from capsids was achieved by an extended heat treatment or digestion of phage particles with proteinase K/SDS yielding a detection limit of 1 pfu/ml. Individual detection of group II phages, group III phages and of both groups was studied with artificially contaminated chicken skin. To recover phages that had strongly adhered to the skin, stomaching

  16. A multiplex real-time PCR for the detection and differentiation of Campylobacter phages.

    Science.gov (United States)

    Jäckel, Claudia; Hammerl, Jens A; Rau, Jörg; Hertwig, Stefan

    2017-01-01

    Campylobacter jejuni and C. coli are important food-borne pathogens that are widespread in animal husbandry. To combat Campylobacter along the food chain, the application of lytic phages has been shown to be a promising tool. Campylobacter phages are currently classified into three groups, of which group II and group III phages are the most common. Members of each group are closely related, whereas the two groups share only little DNA similarity. Moreover, while group III phages are specific for C. jejuni, group II phages additionally infect C. coli. Phage cocktails intended to be used for applications should be composed of various phages that differ in their host range and growth kinetics. The isolation of phages is generally performed by plaque assays. This approach has the limitation that phages are merely identified by their lytic activity on certain indicator strains and that relatively high numbers of phages must be present in a tested sample. Therefore, a more sensitive molecular detection system would be beneficial, which allows a pre-screening of samples and the quick detection and discrimination of group II and group III phages. New phages can then be isolated by use of indicator strains that may be different from those typically applied. On the basis of available Campylobacter phage genome sequences, we developed a multiplex PCR system for group II and group III phages selecting the tail tube gene and the gene for the base plate wedge, respectively, as target. Phages of both groups could be identified with primers deduced from the putative tail fiber gene. Efficient release of phage DNA from capsids was achieved by an extended heat treatment or digestion of phage particles with proteinase K/SDS yielding a detection limit of 1 pfu/ml. Individual detection of group II phages, group III phages and of both groups was studied with artificially contaminated chicken skin. To recover phages that had strongly adhered to the skin, stomaching was the most efficient

  17. Detection of Giardia lamblia, Cryptosporidium spp. and Entamoeba histolytica in clinical stool samples by using multiplex real-time PCR after automated DNA isolation

    NARCIS (Netherlands)

    Van Lint, P; Rossen, J W; Vermeiren, S; Ver Elst, K; Weekx, S; Van Schaeren, J; Jeurissen, A

    2013-01-01

    Diagnosis of intestinal parasites in stool samples is generally still carried out by microscopy; however, this technique is known to suffer from a low sensitivity and is unable to discriminate between certain protozoa. In order to overcome these limitations, a real-time multiplex PCR was evaluated

  18. Effect of capric, lauric and alpha-linolenic acids on the division time distributions of single cells of Staphylococcus aureus.

    Science.gov (United States)

    Sado Kamdem, S; Guerzoni, M E; Baranyi, J; Pin, C

    2008-11-30

    The effect of non-inhibitory concentrations of capric, lauric and alpha-linolenic acids (C10:0, C12:0 and C18:3 respectively) on the division time distribution of single cells of Staphylococcus aureus was evaluated at pH 7 and pH 5. The effect of the initial cell concentration on the lag time of growing cell populations was also assessed. The statistical properties of the division times (defined as the time interval from birth to next binary fission for a single cell) were studied using the method of Elfwing et al. [Elfwing, A., Le Marc, Y., Baranyi, J., Ballagi, A., 2004. Observing the growth and division of large number of individual bacteria using image analysis. Applied and Environmental Microbiology 70, 675-678]. The division times were significantly longer in the presence of free fatty acids than in the control. Shorter division intervals were detected at pH 7 than at pH 5 in the control experiment and in the presence of C10:0. However, both C12:0 and C18:3 slowed down the growth, regardless of the pH. The observed division time distributions were used to simulate growth curves from different inoculum sizes using the stochastic birth process described by Pin and Baranyi [Pin, C., Baranyi, J., 2006. Kinetics of single cells: observation and modelling of a stochastic process. Applied and Environmental Microbiology 72, 2163-2169]. The output of the simulation results were compared with observed data. The lag times fitted to simulated growth curves were in good agreement with those fitted to growth curves measured by plate counts. The averaged out effect of the population masked the effect of the free fatty acids and pH on the division times of single cells.

  19. The Effects of Caffeine on Arousal, Response Time, Accuracy, and Performance in Division I Collegiate Fencers.

    Science.gov (United States)

    Doyle, Taylor P; Lutz, Rafer S; Pellegrino, Joseph K; Sanders, David J; Arent, Shawn M

    2016-11-01

    Doyle, TP, Lutz, RS, Pellegrino, JK, Sanders, DJ, and Arent, SM. The effects of caffeine on arousal, response time, accuracy, and performance in Division I collegiate fencers. J Strength Cond Res 30(11): 3228-3235, 2016-Caffeine has displayed ergogenic effects on aerobic performance. However, sports requiring precision and quick reaction may also be impacted by central nervous system arousal because of caffeine consumption. The purpose of this study was to assess the effects of caffeine on arousal, response time (RT), and accuracy during a simulated fencing practice. Using a randomized, within-subjects, placebo-controlled, double-blind design, Division I male and female college fencers (N = 13; 69.1 ± 3.5 kg) were administered caffeine doses of 0, 1.5, 3.0, 4.5, 6.0, or 7.5 mg·kg during separate testing days. Performance was assessed via RT and accuracy to a 4-choice reaction task. A total of 25 trials were performed each day using a random 2- to 8-s delay between trials. Arousal was assessed using the activation-deactivation adjective check list. Results of repeated-measures multivariate analysis of variance revealed a significant dose effect (p = 0.02) on performance. Follow-up analyses indicated this was due to a significant effect for RT (p = 0.03), with the dose-response curve exhibiting a quadratic relationship. Response time was significantly faster (p performance (p performance beginning to deteriorate at 7.5 mg·kg. Energetic arousal, tiredness, tension, and calmness all significantly changed as a function of caffeine dose (p ≤ 0.05). Based on these results, caffeine improves RT and overall performance in fencers, particularly as doses increase up to 4.5-6.0 mg·kg. Above this level, performance begins to deteriorate, consistent with an "inverted-U" model of arousal and performance.

  20. Satellite-matrix-switched, time-division-multiple-access network simulator

    Science.gov (United States)

    Ivancic, William D.; Andro, Monty; Nagy, Lawrence A.; Budinger, James M.; Shalkhauser, Mary Jo

    A versatile experimental Ka-band network simulator has been implemented at the NASA Lewis Research Center to demonstrate and evaluate a satellite-matrix-switched, time-division-multiple-access (SMS-TDMA) network and to evaluate future digital ground terminals and radiofrequency (RF) components. The simulator was implemented by using proof-of-concept RF components developed under NASA contracts and digital ground terminal and link simulation hardware developed at Lewis. This simulator provides many unique capabilities such as satellite range delay and variation simulation and rain fade simulation. All network parameters (e.g., signal-to-noise ratio, satellite range variation rate, burst density, and rain fade) are controlled and monitored by a central computer. The simulator is presently configured as a three-ground-terminal SMS-TDMA network.

  1. Multiplex real-time PCR probe-based for identification of strains producing: OXA48, VIM, KPC and NDM.

    Science.gov (United States)

    Favaro, Marco; Sarti, Mario; Fontana, Carla

    2014-11-01

    The spread of multi-resistant enterobacteria, particularly carbapenem-resistant Enterobacteriaceae (CRE), in both community and hospital settings is a global problem. The phenotypic identification of CRE is complex, occasionally inconclusive and time consuming. However, commercially available molecular assays are very expensive, and many do not allow the simultaneous identification of all genetic markers of resistance that have been recognised in CRE (bla KPC, bla OXA-48, bla VIM and bla NDM). The aim of the present study is to describe a new test: a multiplex real time PCR probe-based assay designed for the simultaneous detection of KPC, OXA-48, VIM and NDM in a short time (no longer than 90 min from the extraction of DNA to detection). Our assay correctly identified 63 CRE isolates and all standard reference strains tested, in agreement with and extending the results of phenotypic identification tests; additionally, a KPC-VIM co-expressing Enterobacter aerogenes isolate was identified using the new assay, whereas traditional methods failed to detect it. The assay was also able to correctly detect 28 CRE-producers from 50 positive blood cultures, again detecting, in four specimens, the presence of CRE co-expressing KPC and VIM, which were only partially identified by traditional methods. Finally, when used directly on rectal swabs, the assay enabled the identification of CRE-carrier patients, for whom isolation is mandatory in a hospital setting.

  2. Comparison of nested-multiplex, Taqman & SYBR Green real-time PCR in diagnosis of amoebic liver abscess in a tertiary health care institute in India

    Directory of Open Access Journals (Sweden)

    K P Dinoop

    2016-01-01

    Interpretation & conclusions: Taqman real-time PCR targeting the 18S rRNA had the highest positivity rate evaluated in this study. Both nested multiplex and SYBR Green real-time PCR assays utilized were evaluated to give accurate results. Real-time PCR assays can be used as the gold standard in rapid and reliable diagnosis, and appropriate management of amoebiasis, replacing the conventional molecular methods.

  3. Timing organization of a real-time multicore processor

    DEFF Research Database (Denmark)

    Schoeberl, Martin; Sparsø, Jens

    2017-01-01

    Real-time systems need a time-predictable computing platform. Computation, communication, and access to shared resources needs to be time-predictable. We use time division multiplexing to statically schedule all computation and communication resources, such as access to main memory or message pas......-predictable multicore processor where we can statically analyze the worst-case execution time of tasks....

  4. Systems-level quantification of division timing reveals a common genetic architecture controlling asynchrony and fate asymmetry

    Science.gov (United States)

    Ho, Vincy Wing Sze; Wong, Ming-Kin; An, Xiaomeng; Guan, Daogang; Shao, Jiaofang; Ng, Hon Chun Kaoru; Ren, Xiaoliang; He, Kan; Liao, Jinyue; Ang, Yingjin; Chen, Long; Huang, Xiaotai; Yan, Bin; Xia, Yiji; Chan, Leanne Lai Hang; Chow, King Lau; Yan, Hong; Zhao, Zhongying

    2015-01-01

    Coordination of cell division timing is crucial for proper cell fate specification and tissue growth. However, the differential regulation of cell division timing across or within cell types during metazoan development remains poorly understood. To elucidate the systems-level genetic architecture coordinating division timing, we performed a high-content screening for genes whose depletion produced a significant reduction in the asynchrony of division between sister cells (ADS) compared to that of wild-type during Caenorhabditis elegans embryogenesis. We quantified division timing using 3D time-lapse imaging followed by computer-aided lineage analysis. A total of 822 genes were selected for perturbation based on their conservation and known roles in development. Surprisingly, we find that cell fate determinants are not only essential for establishing fate asymmetry, but also are imperative for setting the ADS regardless of cellular context, indicating a common genetic architecture used by both cellular processes. The fate determinants demonstrate either coupled or separate regulation between the two processes. The temporal coordination appears to facilitate cell migration during fate specification or tissue growth. Our quantitative dataset with cellular resolution provides a resource for future analyses of the genetic control of spatial and temporal coordination during metazoan development. PMID:26063786

  5. Systems-level quantification of division timing reveals a common genetic architecture controlling asynchrony and fate asymmetry.

    Science.gov (United States)

    Ho, Vincy Wing Sze; Wong, Ming-Kin; An, Xiaomeng; Guan, Daogang; Shao, Jiaofang; Ng, Hon Chun Kaoru; Ren, Xiaoliang; He, Kan; Liao, Jinyue; Ang, Yingjin; Chen, Long; Huang, Xiaotai; Yan, Bin; Xia, Yiji; Chan, Leanne Lai Hang; Chow, King Lau; Yan, Hong; Zhao, Zhongying

    2015-06-10

    Coordination of cell division timing is crucial for proper cell fate specification and tissue growth. However, the differential regulation of cell division timing across or within cell types during metazoan development remains poorly understood. To elucidate the systems-level genetic architecture coordinating division timing, we performed a high-content screening for genes whose depletion produced a significant reduction in the asynchrony of division between sister cells (ADS) compared to that of wild-type during Caenorhabditis elegans embryogenesis. We quantified division timing using 3D time-lapse imaging followed by computer-aided lineage analysis. A total of 822 genes were selected for perturbation based on their conservation and known roles in development. Surprisingly, we find that cell fate determinants are not only essential for establishing fate asymmetry, but also are imperative for setting the ADS regardless of cellular context, indicating a common genetic architecture used by both cellular processes. The fate determinants demonstrate either coupled or separate regulation between the two processes. The temporal coordination appears to facilitate cell migration during fate specification or tissue growth. Our quantitative dataset with cellular resolution provides a resource for future analyses of the genetic control of spatial and temporal coordination during metazoan development. © 2015 The Authors. Published under the terms of the CC BY 4.0 license.

  6. Tag-to-Tag Interference Suppression Technique Based on Time Division for RFID

    Directory of Open Access Journals (Sweden)

    Grishma Khadka

    2017-01-01

    Full Text Available Radio-frequency identification (RFID is a tracking technology that enables immediate automatic object identification and rapid data sharing for a wide variety of modern applications using radio waves for data transmission from a tag to a reader. RFID is already well established in technical areas, and many companies have developed corresponding standards and measurement techniques. In the construction industry, effective monitoring of materials and equipment is an important task, and RFID helps to improve monitoring and controlling capabilities, in addition to enabling automation for construction projects. However, on construction sites, there are many tagged objects and multiple RFID tags that may interfere with each other’s communications. This reduces the reliability and efficiency of the RFID system. In this paper, we propose an anti-collision algorithm for communication between multiple tags and a reader. In order to suppress interference signals from multiple neighboring tags, the proposed algorithm employs the time-division (TD technique, where tags in the interrogation zone are assigned a specific time slot so that at every instance in time, a reader communicates with tags using the specific time slot. We present representative computer simulation examples to illustrate the performance of the proposed anti-collision technique for multiple RFID tags.

  7. Channel estimation for space-time trellis coded-OFDM systems based on nonoverlapping pilot structure

    CSIR Research Space (South Africa)

    Sokoya, O

    2008-09-01

    Full Text Available The performance of space time trellis coded orthogonal frequency division multiplexing (STTC-OFDM) systems relies on accurate channel state information at the receiver for proper decoding. One method of obtaining channel state information...

  8. Expected Time to Return to Athletic Participation After Stress Fracture in Division I Collegiate Athletes.

    Science.gov (United States)

    Miller, Timothy L; Jamieson, Marissa; Everson, Sonsecharae; Siegel, Courtney

    2017-12-01

    Few studies have documented expected time to return to athletic participation after stress fractures in elite athletes. Time to return to athletic participation after stress fractures would vary by site and severity of stress fracture. Retrospective cohort study. Level 3. All stress fractures diagnosed in a single Division I collegiate men's and women's track and field/cross-country team were recorded over a 3-year period. Site and severity of injury were graded based on Kaeding-Miller classification system for stress fractures. Time to return to full unrestricted athletic participation was recorded for each athlete and correlated with patient sex and site and severity grade of injury. Fifty-seven stress fractures were diagnosed in 38 athletes (mean age, 20.48 years; range, 18-23 years). Ten athletes sustained recurrent or multiple stress fractures. Thirty-seven injuries occurred in women and 20 in men. Thirty-three stress fractures occurred in the tibia, 10 occurred in the second through fourth metatarsals, 3 occurred in the fifth metatarsal, 6 in the tarsal bones (2 navicular), 2 in the femur, and 5 in the pelvis. There were 31 grade II stress fractures, 11 grade III stress fractures, and 2 grade V stress fractures (in the same patient). Mean time to return to unrestricted sport participation was 12.9 ± 5.2 weeks (range, 6-27 weeks). No significant differences in time to return were noted based on injury location or whether stress fracture was grade II or III. The expected time to return to full unrestricted athletic participation after diagnosis of a stress fracture is 12 to 13 weeks for all injury sites. Athletes with grade V (nonunion) stress fractures may require more time to return to sport.

  9. Oscillatory multiplexing of neural population codes for interval timing and working memory

    NARCIS (Netherlands)

    Gu, Bon-Mi; van Rijn, Hedderik; Meck, Warren H.

    Interval timing and working memory are critical components of cognition that are supported by neural oscillations in prefrontal-striatal-hippocampal circuits. In this review, the properties of interval timing and working memory are explored in terms of behavioral, anatomical, pharmacological, and

  10. Detection of Mycobacterium chelonae, Mycobacterium abscessus Group, and Mycobacterium fortuitum Complex by a Multiplex Real-Time PCR Directly from Clinical Samples Using the BD MAX System.

    Science.gov (United States)

    Rocchetti, Talita T; Silbert, Suzane; Gostnell, Alicia; Kubasek, Carly; Campos Pignatari, Antonio C; Widen, Raymond

    2017-03-01

    A new multiplex PCR test was designed to detect Mycobacterium chelonae, Mycobacterium abscessus group, and Mycobacterium fortuitum complex on the BD MAX System. A total of 197 clinical samples previously submitted for mycobacterial culture were tested using the new protocol. Samples were first treated with proteinase K, and then each sample was inoculated into the BD MAX Sample Buffer Tube. Extraction and multiplex PCR were performed by the BD MAX System, using the BD MAX ExK TNA-3 extraction kit and BD TNA Master Mix, along with specific in-house designed primers and probes for each target. The limit of detection of each target, as well as specificity, was evaluated. Of 197 clinical samples included in this study, 133 were positive and 60 were negative for mycobacteria by culture, and another 4 negative samples were spiked with M. chelonae ATCC 35752. The new multiplex PCR on the BD MAX had 97% concordant results with culture for M. abscessus group detection, 99% for M. chelonae, and 100% for M. fortuitum complex. The new multiplex PCR test performed on the BD MAX System proved to be a sensitive and specific test to detect M. chelonae, M. abscessus group, and M. fortuitum complex by real-time PCR on an automated sample-in results-out platform. Copyright © 2017 American Society for Investigative Pathology and the Association for Molecular Pathology. Published by Elsevier Inc. All rights reserved.

  11. Clinical utility of an optimised multiplex real-time PCR assay for the identification of pathogens causing sepsis in Vietnamese patients.

    Science.gov (United States)

    Tat Trung, Ngo; Van Tong, Hoang; Lien, Tran Thi; Van Son, Trinh; Thanh Huyen, Tran Thi; Quyen, Dao Thanh; Hoan, Phan Quoc; Meyer, Christian G; Song, Le Huu

    2018-02-01

    For the identification of bacterial pathogens, blood culture is still the gold standard diagnostic method. However, several disadvantages apply to blood cultures, such as time and rather large volumes of blood sample required. We have previously established an optimised multiplex real-time PCR method in order to diagnose bloodstream infections. In the present study, we evaluated the diagnostic performance of this optimised multiplex RT-PCR in blood samples collected from 110 septicaemia patients enrolled at the 108 Military Central Hospital, Hanoi, Vietnam. Positive results were obtained by blood culture, the Light Cylcler-based SeptiFast ® assay and our multiplex RT-PCR in 35 (32%), 31 (28%), and 31 (28%) samples, respectively. Combined use of the three methods confirmed 50 (45.5%) positive cases of bloodstream infection, a rate significantly higher compared to the exclusive use of one of the three methods (P=0.052, 0.012 and 0.012, respectively). The sensitivity, specificity and area under the curve (AUC) of our assay were higher compared to that of the SeptiFast ® assay (77.4%, 86.1% and 0.8 vs. 67.7%, 82.3% and 0.73, respectively). Combined use of blood culture and multiplex RT-PCR assay showed a superior diagnostic performance, as the sensitivity, specificity, and AUC reached 83.3%, 100%, and 0.95, respectively. The concordance between blood culture and the multiplex RT-PCR assay was highest for Klebsiella pneumonia (100%), followed by Streptococcus spp. (77.8%), Escherichia coli (66.7%), Staphylococcus spp. (50%) and Salmonella spp. (50%). In addition, the use of the newly established multiplex RT-PCR assay increased the spectrum of identifiable agents (Acintobacter baumannii, 1/32; Proteus mirabilis, 1/32). The combination of culture and the multiplex RT-PCR assay provided an excellent diagnostic accomplishment and significantly supported the identification of causative pathogens in clinical samples obtained from septic patients. Copyright © 2017 The

  12. Single view reflectance capture using multiplexed scattering and time-of-flight imaging

    OpenAIRE

    Zhao, Shuang; Velten, Andreas; Raskar, Ramesh; Bala, Kavita; Naik, Nikhil Deepak

    2011-01-01

    This paper introduces the concept of time-of-flight reflectance estimation, and demonstrates a new technique that allows a camera to rapidly acquire reflectance properties of objects from a single view-point, over relatively long distances and without encircling equipment. We measure material properties by indirectly illuminating an object by a laser source, and observing its reflected light indirectly using a time-of-flight camera. The configuration collectively acquires dense angular, but l...

  13. Advanced Silicon Photonic Transceivers - the Case of a Wavelength Division and Polarization Multiplexed Quadrature Phase Shift Keying Receiver for Terabit/s Optical Transmission

    Science.gov (United States)

    2017-03-10

    S) AND ADDRESS(ES) AFOSR/SOARD U.S. Embassy Santiago Av. Andres Bello 2800 Santiago, Chile 10. SPONSOR/MONITOR’S ACRONYM(S) AFRL/AFOSR IOS 11...with the aid of polarization controllers. A 50 GHz 160 GS/s real-time oscilloscope stores the output of the TIA for offline processing. The system

  14. Standardisation and evaluation of a quantitative multiplex real-time PCR assay for the rapid identification of Streptococcus pneumoniae

    Directory of Open Access Journals (Sweden)

    Feroze Ahmed Ganaie

    2015-01-01

    Full Text Available Rapid diagnosis of Streptococcus pneumoniae can play a significant role in decreasing morbidity and mortality of infection. The accurate diagnosis of pneumococcal disease is hampered by the difficulties in growing the isolates from clinical specimens and also by misidentification. Molecular methods have gained popularity as they offer improvement in the detection of causative pathogens with speed and ease. The present study aims at validating and standardising the use of 4 oligonucleotide primer-probe sets (pneumolysin [ply], autolysin [lytA], pneumococcal surface adhesion A [psaA] and Spn9802 [DNA fragment] in a single-reaction mixture for the detection and discrimination of S. pneumoniae. Here, we validate a quantitative multiplex real-time PCR (qmPCR assay with a panel consisting of 43 S. pneumoniae and 29 non-pneumococcal isolates, 20 culture positive, 26 culture negative and 30 spiked serum samples. A standard curve was obtained using S. pneumoniae ATCC 49619 strain and glyceraldehyde 3-phosphate dehydrogenase (GAPDH gene was used as an endogenous internal control. The experiment showed high sensitivity with lower limit of detection equivalent to 4 genome copies/µl. The efficiency of the reaction was 100% for ply, lytA, Spn9802 and 97% for psaA. The test showed sensitivity and specificity of 100% with culture isolates and serum specimens. This study demonstrates that qmPCR analysis of sera using 4 oligonucleotide primers appears to be an appropriate method for the genotypic identification of S. pneumoniae infection.

  15. Development of a Multiplex Real-Time PCR for Determination of Apricot in Marzipan Using the Plexor System.

    Science.gov (United States)

    Schelm, Stefanie; Haase, Ilka; Fischer, Christin; Fischer, Markus

    2017-01-18

    Marzipan is a confectionary which is mostly offered in form of filled chocolate, pralines, or pure. According to the German guidelines for oil seeds only almonds, sugar and water are admitted ingredients of marzipan. A product very similar in taste is persipan which is used in the confectionary industry because of its stronger flavor. For persipan production almonds are replaced by debittered apricot or peach kernels. To guarantee high quality products for consumers, German raw paste producers have agreed a limit of apricot kernels in marzipan raw paste of 0.5%. Different DNA-based methods for quantitation of persipan contaminations in marzipan are already published. To increase the detection specificity compared to published intercalation dye-based assays, the present work demonstrate the utilization of a multiplex real-time PCR based on the Plexor technology. Thus, the present work enables the detection of at least 0.1% apricot DNA in almond DNA or less. By analyzing DNA mixtures, the theoretical limit of quantification of the duplex PCR for the quantitation of persipan raw paste DNA in marzipan raw paste DNA was determined as 0.05%.

  16. Multiplex real-time PCR using temperature sensitive primer-supplying hydrogel particles and its application for malaria species identification.

    Directory of Open Access Journals (Sweden)

    Junsun Kim

    Full Text Available Real-time PCR, also called quantitative PCR (qPCR, has been powerful analytical tool for detection of nucleic acids since it developed. Not only for biological research but also for diagnostic needs, qPCR technique requires capacity to detect multiple genes in recent years. Solid phase PCR (SP-PCR where one or two directional primers are immobilized on solid substrates could analyze multiplex genetic targets. However, conventional SP-PCR was subjected to restriction of application for lack of PCR efficiency and quantitative resolution. Here we introduce an advanced qPCR with primer-incorporated network (PIN. One directional primers are immobilized in the porous hydrogel particle by covalent bond and the other direction of primers are temporarily immobilized at so-called 'Supplimers'. Supplimers released the primers to aqueous phase in the hydrogel at the thermal cycling of PCR. It induced the high PCR efficiency over 92% with high reliability. It reduced the formation of primer dimers and improved the selectivity of qPCR thanks to the strategy of 'right primers supplied to right place only'. By conducting a six-plex qPCR of 30 minutes, we analyzed DNA samples originated from malaria patients and successfully identified malaria species in a single reaction.

  17. Rapid identification of aminoglycoside-induced deafness gene mutations using multiplex real-time polymerase chain reaction.

    Science.gov (United States)

    Huang, Shasha; Xiang, Guangxin; Kang, Dongyang; Wang, Chen; Kong, Yanling; Zhang, Xun; Liang, Shujian; Mitchelson, Keith; Xing, Wanli; Dai, Pu

    2015-07-01

    Exposure to aminoglycoside antibiotics can induce ototoxicity in genetically susceptible individuals carrying certain mitochondrial DNA (mtDNA) mutations (C1494T and A1555G), resulting in hearing loss. So, a rapid diagnostic approach is needed to accurately identify subjects carrying such gene mutations. In the present study, we describe a rapid and reliable four-color, real-time quantitative polymerase chain reaction (qPCR) assay for simultaneously detecting two mtDNA 12S rRNA gene variants, A1555G and C1494T, which are prevalent in the Han Chinese population. This multiplex assay incorporates three allele-specific TaqMan probes labeled with different fluorophores in a single reaction, providing high genotyping accuracy for clinical blood samples. Tests with C1494T, A1555G and wild-type DNA exhibited high sensitivity, specificity, reproducibility and accuracy of discriminating mutations from wild-type. This study shows that this simple and inexpensive method can be used for routine molecular diagnostics and potentially for large-scale genetic screening. Copyright © 2015. Published by Elsevier Ireland Ltd.

  18. Flexible DWDM Grid Manipulation Using Four Wave Mixing-based Time Lenses

    DEFF Research Database (Denmark)

    Røge, Kasper Meldgaard; Guan, Pengyu; Mulvad, Hans Christian Hansen

    2014-01-01

    An experimental demonstration of dense wavelength-division multiplexing (DWDM) grid manipulation is carried out using two time lenses. A DWDM spectrum is compressed from a 100-GHz to a 28-GHz grid with error-free performance.......An experimental demonstration of dense wavelength-division multiplexing (DWDM) grid manipulation is carried out using two time lenses. A DWDM spectrum is compressed from a 100-GHz to a 28-GHz grid with error-free performance....

  19. A multiplexed quantum memory.

    Science.gov (United States)

    Lan, S-Y; Radnaev, A G; Collins, O A; Matsukevich, D N; Kennedy, T A; Kuzmich, A

    2009-08-03

    A quantum repeater is a system for long-distance quantum communication that employs quantum memory elements to mitigate optical fiber transmission losses. The multiplexed quantum memory (O. A. Collins, S. D. Jenkins, A. Kuzmich, and T. A. B. Kennedy, Phys. Rev. Lett. 98, 060502 (2007)) has been shown theoretically to reduce quantum memory time requirements. We present an initial implementation of a multiplexed quantum memory element in a cold rubidium gas. We show that it is possible to create atomic excitations in arbitrary memory element pairs and demonstrate the violation of Bell's inequality for light fields generated during the write and read processes.

  20. Rapid detection and differentiation of Campylobacter jejuni, Campylobacter coli, and Campylobacter lari in food, using multiplex real-time PCR.

    Science.gov (United States)

    Mayr, A M; Lick, S; Bauer, J; Thärigen, D; Busch, U; Huber, I

    2010-02-01

    A multiplex real-time PCR assay based on four differently labeled TaqMan probes for detection and differentiation of the thermophilic Campylobacter species C. jejuni, C. coli, and C. lari was established and validated in food products. This assay combines two previously published PCR assays for C. jejuni and C. coli with a newly developed detection assay for C. lari and an internal amplification control system. The selectivity of the method was determined by analyzing 70 Campylobacter strains and 43 strains of other bacteria. The sensitivity was 50 fg of C. jejuni and C. lari DNA and 500 fg of C. coli DNA per PCR. It was possible to detect 1 to 10 CFU/25 g of food before preenrichment of all three species. More than 400 samples of various foods (poultry, seafood, and meat) were analyzed after 48 h of preenrichment parallel to the conventional diagnostic method of culture and biochemical identification. Using the established real-time PCR assay, 55.4% of the samples were recognized as positive for thermophilic Campylobacter species, whereas with the conventional method only 40.3% of the samples were positive. The real-time PCR assay also detected contaminations with two different Campylobacter species in 32.6% of the analyzed poultry samples, a finding of epidemiological interest. Compared with the original PCR method, which was established for the differentiation of bacterial isolates of C. jejuni and C. coli, this new method also detects and distinguishes C. lari, was validated as an analytical tool for food analysis, and provides reliable and extensive results within 2 days.

  1. Quantitation of Marek's disease and chicken anemia viruses in organs of experimentally infected chickens and commercial chickens by multiplex real-time PCR.

    Science.gov (United States)

    Davidson, Irit; Raibshtein, I; Al-Touri, A

    2013-06-01

    The worldwide distribution of chicken anemia virus (CAV) and Marek's disease virus (MDV) is well documented. In addition to their economic significance in single- or dual-virus infections, the two viruses can often accompany various other pathogens and affect poultry health either directly, by causing tumors, anemia, and delayed growth, or indirectly, by aggravating other diseases, as a result of their immunosuppressive effects. After a decade of employing the molecular diagnosis of those viruses, which replaced conventional virus isolation, we present the development of a real-time multiplex PCR for the simultaneous detection of both viruses. The real-time PCRs for MDV and for CAV alone are more sensitive than the respective end-point PCRs. In addition, the multiplex real-time shows a similar sensitivity when compared to the single real-time PCR for each virus. The newly developed real-time multiplex PCR is of importance in terms of the diagnosis and detection of low copies of each virus, MDV and CAV in single- and in multiple-virus infections, and its applicability will be further evaluated.

  2. Luminescence decay time encoding of magnetic micro spheres for multiplexed analysis.

    Science.gov (United States)

    Mayr, Torsten; Moser, Christoph; Klimant, Ingo

    2007-07-30

    Magnetic microspheres are optically encoded by doping with three luminescent dyes. The combination of a fluorophore with a nanosecond decay profile and two phosphorescent Ruthenium metal ligand complexes with a microsecond decay profile generates a characteristic signature described by three features: bead brightness, luminescent decay time and dual lifetime referencing (DLR). The beads are identified by time resolved imaging in the microsecond range. A series of fluorophores is tested and the interference of the resulting luminescent code in the red and green label detection channels is investigated. A detailed staining procedure is worked out to increase the staining efficiency of the dyes with hydrophilic character into the lipophilic polystyrene microspheres. A mathematical model is established to calculate the dye amounts that are needed for staining a bead family with a specific feature set. Nineteen bead families were prepared representing the grid points in the three planes of a cube referring to the three features. The coefficient of variation over all bead families is 7%, 1.4% and 1.6% for bead brightness, luminescence decay time and DLR, respectively. The combination of these features and the bead size as additional feature enables the creation of 840 distinguishable bead families.

  3. Time-multiplexed structured illumination using a DMD for optical diffraction tomography

    Science.gov (United States)

    Lee, KyeoReh; Kim, Kyoohyun; Kim, Geon; Shin, Seungwoo; Park, YongKeun

    2017-03-01

    We present a novel illumination control technique for optical diffraction tomography (ODT). Various spatial frequencies of beam illumination were controlled by displaying time-averaged sinusoidal patterns using a digital micromirror device (DMD). Compared to the previous method using binary Lee holograms, the present method eliminates unwanted diffracted beams which may deteriorate the image quality of the ODT. We demonstrated the capability of the present method by reconstructing three-dimensional refractive index (RI) distributions of various samples, with high RI sensitivity (\\sigma_\\Delta n = 3.15 +/- 10-4), and reconstructing 3-D RI tomograms of biological samples, which provided quantitative biochemical and morphological information about the samples.

  4. Multiplex real-time PCR (TaqMan) assay for the simultaneous detection and discrimination of potato powdery and common scab diseases and pathogens.

    Science.gov (United States)

    Qu, X S; Wanner, L A; Christ, B J

    2011-03-01

    To develop a multiplex real-time PCR assay using TaqMan probes for the simultaneous detection and discrimination of potato powdery scab and common scab, two potato tuber diseases with similar symptoms, and the causal pathogens Spongospora subterranea and plant pathogenic Streptomyces spp. Real-time PCR primers and a probe for S. subterranea were designed based on the DNA sequence of the ribosomal RNA ITS2 region. Primers and a probe for pathogenic Streptomyces were designed based on the DNA sequence of the txtAB genes. The two sets of primer pairs and probes were used in a single real-time PCR assay. The multiplex real-time PCR assay was confirmed to be specific for S. subterranea and pathogenic Streptomyces. The assay detected DNA quantities of 100 fg for each of the two pathogens and linear responses and high correlation coefficients between the amount of DNA and C(t) values for each pathogen were achieved. The presence of two sets of primer pairs and probes and of plant extracts did not alter the sensitivity and efficiency of multiplex PCR amplification. Using the PCR assay, we could discriminate between powdery scab and common scab tubers with similar symptoms. Common scab and powdery scab were detected in some tubers with no visible symptoms. Mixed infections of common scab and powdery scab on single tubers were also revealed. This multiplex real-time PCR assay is a rapid, cost efficient, specific and sensitive tool for the simultaneous detection and discrimination of the two pathogens on infected potato tubers when visual symptoms are inconclusive or not present. Accurate and quick identification and discrimination of the cause of scab diseases on potatoes will provide critical information to potato growers and researchers for disease management. This is important because management strategies for common and powdery scab diseases are very different. © 2011 The Authors. Journal of Applied Microbiology © 2011 The Society for Applied Microbiology.

  5. Rapid detection method for Bacillus anthracis using a combination of multiplexed real-time PCR and pyrosequencing and its application for food biodefense.

    Science.gov (United States)

    Janzen, Timothy W; Thomas, Matthew C; Goji, Noriko; Shields, Michael J; Hahn, Kristen R; Amoako, Kingsley K

    2015-02-01

    Bacillus anthracis, the causative agent of anthrax, has the capacity to form highly resilient spores as part of its life cycle. The potential for the dissemination of these spores using food as a vehicle is a huge public health concern and, hence, requires the development of a foodborne bioterrorism response approach. In this work, we address a critical gap in food biodefense by presenting a novel, combined, sequential method involving the use of real-time PCR and pyrosequencing for the rapid, specific detection of B. anthracis spores in three food matrices: milk, apple juice, and bottled water. The food samples were experimentally inoculated with 40 CFU ml(-1), and DNA was extracted from the spores and analyzed after immunomagnetic separation. Applying the combination of multiplex real-time PCR and pyrosequencing, we successfully detected the presence of targets on both of the virulence plasmids and the chromosome. The results showed that DNA amplicons generated from a five-target multiplexed real-time PCR detection using biotin-labeled primers can be used for single-plex pyrosequencing detection. The combined use of multiplexed real-time PCR and pyrosequencing is a novel, rapid detection method for B. anthracis from food and provides a tool for accurate, quantitative identification with potential biodefense applications.

  6. Network of time-multiplexed optical parametric oscillators as a coherent Ising machine

    Science.gov (United States)

    Marandi, Alireza; Wang, Zhe; Takata, Kenta; Byer, Robert L.; Yamamoto, Yoshihisa

    2014-12-01

    Finding the ground states of the Ising Hamiltonian maps to various combinatorial optimization problems in biology, medicine, wireless communications, artificial intelligence and social network. So far, no efficient classical and quantum algorithm is known for these problems and intensive research is focused on creating physical systems—Ising machines—capable of finding the absolute or approximate ground states of the Ising Hamiltonian. Here, we report an Ising machine using a network of degenerate optical parametric oscillators (OPOs). Spins are represented with above-threshold binary phases of the OPOs and the Ising couplings are realized by mutual injections. The network is implemented in a single OPO ring cavity with multiple trains of femtosecond pulses and configurable mutual couplings, and operates at room temperature. We programmed a small non-deterministic polynomial time-hard problem on a 4-OPO Ising machine and in 1,000 runs no computational error was detected.

  7. An experimental study for rapid detection and quantification of endodontic microbiota following photo-activated disinfection via new multiplex real-time PCR assay.

    Science.gov (United States)

    Pourhajibagher, Maryam; Raoofian, Reza; Ghorbanzadeh, Roghayeh; Bahador, Abbas

    2018-03-01

    The infected root canal system harbors one of the highest accumulations of polymicrobial infections. Since the eradication of endopathogenic microbiota is a major goal in endodontic infection therapy, photo-activated disinfection (PAD) can be used as an alternative therapeutic method in endodontic treatment. Compared to cultivation-based approaches, molecular techniques are more reliable for identifying microbial agents associated with endodontic infections. The purpose of this study was to evaluate the ability of designed multiplex real-time PCR protocol for the rapid detection and quantification of six common microorganisms involved in endodontic infection before and after the PAD. Samples were taken from the root canals of 50 patients with primary and secondary/persistent endodontic infections using sterile paper points. PAD with toluidine blue O (TBO) plus diode laser was performed on root canals. Resampling was then performed, and the samples were transferred to transport medium. Then, six target microorganisms were detected using multiplex real-time PCR before and after the PAD. Veillonella parvula was found using multiplex real-time PCR to have the highest frequency among samples collected before the PAD (29.4%), followed by Porphyromonas gingivalis (23.1%), Aggregatibacter actinomycetemcomitans (13.6%), Actinomyces naeslundii (13.0%), Enterococcus faecalis (11.5%), and Lactobacillus rhamnosus (9.4%). After TBO-mediated PAD, P. gingivalis strains, the most resistance microorganisms, were recovered in 41.7% of the samples using molecular approach (P > 0.05). As the results shown, multiplex real-time PCR as an accurate detection approach with high-throughput and TBO-mediated PAD as an efficient antimicrobial strategy due to the significant reduction of the endopathogenic count can be used for detection and treatment of microbiota involved in infected root canals, respectively. Copyright © 2018 Elsevier B.V. All rights reserved.

  8. Interacting opinion and disease dynamics in multiplex networks: Discontinuous phase transition and nonmonotonic consensus times.

    Science.gov (United States)

    Velásquez-Rojas, Fátima; Vazquez, Federico

    2017-05-01

    Opinion formation and disease spreading are among the most studied dynamical processes on complex networks. In real societies, it is expected that these two processes depend on and affect each other. However, little is known about the effects of opinion dynamics over disease dynamics and vice versa, since most studies treat them separately. In this work we study the dynamics of the voter model for opinion formation intertwined with that of the contact process for disease spreading, in a population of agents that interact via two types of connections, social and contact. These two interacting dynamics take place on two layers of networks, coupled through a fraction q of links present in both networks. The probability that an agent updates its state depends on both the opinion and disease states of the interacting partner. We find that the opinion dynamics has striking consequences on the statistical properties of disease spreading. The most important is that the smooth (continuous) transition from a healthy to an endemic phase observed in the contact process, as the infection probability increases beyond a threshold, becomes abrupt (discontinuous) in the two-layer system. Therefore, disregarding the effects of social dynamics on epidemics propagation may lead to a misestimation of the real magnitude of the spreading. Also, an endemic-healthy discontinuous transition is found when the coupling q overcomes a threshold value. Furthermore, we show that the disease dynamics delays the opinion consensus, leading to a consensus time that varies nonmonotonically with q in a large range of the model's parameters. A mean-field approach reveals that the coupled dynamics of opinions and disease can be approximately described by the dynamics of the voter model decoupled from that of the contact process, with effective probabilities of opinion and disease transmission.

  9. Optical Time Division Switching Using Multiple Stages of Fiber Optic Delay Lines.

    Science.gov (United States)

    Spanke, Ronald Anthony

    Optical Time Slot Interchanges (OTSIs) can be realized by guided wave LiNbO_3 optical switches performing space division switching of optical fiber delay lines. In this dissertation the problems of reducing the total length of fiber required and also of improving the SNR characteristics of this OTSI function are addressed. Several new OTSI architectures are proposed to reduce the total fiber length while still obtaining excellent SNR characteristics. These reduced fiber architectures include the Distributed Input Delay, Distributed Output Delay, the 2-Stage decomposition and the Distributed Input/Output Delay architectures. A Parallel Feedback (PFB) OTSI architecture is proposed that achieves the theoretical minimum number of delay fibers and the theoretical minimum total length of delay fiber for a given OTSI function. Broadcast OTSI architectures are proposed that enable the data in an incoming time slot to be broadcast to one or more outgoing time slots. These broadcast OTSI architectures include the Time-Dup-Time (TDT) system, Passive Splitter/Active Combiner (PS/AC) equivalents of the point -to-point reduced fiber architectures, and the broadcast PFB architecture. For each of the point-to-point and the broadcast OTSI architectures proposed, a detailed characterization of the architecture is performed including an analysis of number of fibers, total fiber length, number of optical switches and drivers, attenuation and SNR characteristics. This dissertation also proposes several new techniques for improving the system SNR and for calibration of the OTSI architectures. A cascaded noise reduction and a differential attenuation compensation technique are used to achieve a significantly higher system SNR at the output of the OTSI. In-situ calibration techniques are discussed to determine the optimum operating voltages for the LiNbO _3 switches when alternating between states every time slot. These techniques attempt to compensate for an output power drift problem

  10. Identification of Campylobacter jejuni and determination of point mutations associated with macrolide resistance using a multiplex TaqMan MGB real-time PCR.

    Science.gov (United States)

    Hao, H; Liu, J; Kuang, X; Dai, M; Cheng, G; Wang, X; Peng, D; Huang, L; Ahmad, I; Ren, N; Liu, Z; Wang, Y; Yuan, Z

    2015-06-01

    The aim of the study was to develop a multiplex real-time PCR method to identify Campylobacter jejuni containing mutations commonly associated with macrolide resistance. A multiplex fluorescence real-time PCR assay was developed based on TaqMan minor groove binder (MGB) probes. The VS1-MGB probe was designed based on the VS1 gene and was used to identify Camp. jejuni. The 23S rDNA-MGB probe was designed to distinguish macrolide resistance mutations in 23S rDNA, while 57D-MGB and 74D-MGB were designed to detect resistance mutations in ribosomal protein L4. The specificity and accuracy of our method were identical to the conventional biochemical tests, mapA PCR, minimum inhibitory concentration (MIC) determination and DNA sequencing. The linear detection limit of the method was 0·03 ng genomic DNA and three colony formation unit (CFU) per reaction. In 6 of 18 cases, the nature of Erythromycin resistance could be correctly determined from natural isolates; absence of the tested mutations was demonstrated in the remaining four resistant isolates. A multiplex TaqMan MGB real-time PCR assay with high specificity and accuracy was developed to simultaneously identify Camp. jejuni and detect the gene mutations associated with macrolide resistance. This multiplex method can potentially simplify the identification of Camp. jejuni and determine macrolide resistance due to mutations in 23S rDNA or ribosomal protein L4. This method has a potential for application in different research areas and molecular surveillance. © 2015 The Society for Applied Microbiology.

  11. A Multiplex SYBR Green Real-Time PCR Assay for the Detection of Three Colistin Resistance Genes from Cultured Bacteria, Feces, and Environment Samples

    Directory of Open Access Journals (Sweden)

    Jiyun Li

    2017-10-01

    Full Text Available The aim of the study was to develop a multiplex assay for rapid detection of mcr-1, mcr-2, and mcr-3, a group of genes of conferring resistance to colistin mediated by plasmid in Enterobacteriaceae. A SYBR Green based real-time PCR assay has been designed to detect the mcr genes, and applied to cultured bacteria, feces and soil samples. All three mcr genes could be detected with a lower limit of 102 cultured bacteria. This test was highly specific and sensitive, and generated no false-positive results. The assay was also conclusive when applied to feces and soil samples containing mcr-1-positive Escherichia coli, which could facilitate the screening of mcr genes not only in the bacteria, but also directly from the environment. This simple, rapid, sensitive, and specific multiplex assay will be useful for rapid screening of the colistin resistance in both clinical medicine and animal husbandry.

  12. A time for change: an exploration of attitudes toward part-time work in academia among women internists and their division chiefs.

    Science.gov (United States)

    Harrison, Rebecca A; Gregg, Jessica L

    2009-01-01

    Increasing numbers of clinicians desire part-time work, and many will opt out of academic medicine if the barriers to part-time work are too great. Purposeful sampling was used to investigate the experiences of part-time academic physicians and their division leaders to understand (1) how each identified the negative and positive consequences of part-time work, and (2) how each conceptualize part-time work. In 2004, the authors interviewed the Society of General Medicine Horn Scholars Program applicants and their division chiefs from the 2001 and 2004 award cycles and performed a qualitative analysis of the one- to two-hour audiotaped interviews. Seven out of nine eligible applicants and six of seven division chiefs participated. All applicants were female junior faculty clinician educators in academic internal medicine from seven institutions. All division chiefs were male full-time faculty members. Both applicants and division chiefs identified multiple specific negative and positive consequences of part-time work. Analysis of interviews suggested that both groups tended to frame part-time work as a decision to "work less" or to "work differently." Self-reflection and articulation of values helped some faculty determine where they derive the greatest happiness and fulfillment personally and professionally. As more academics seek work-life balance and consider part-time work as a tool to achieve that balance, academic medicine will be challenged to develop creative models for integrating successful part-time physicians, or it will lose that segment of the workforce. This study's findings suggest that one such model may require that physicians and their leaders reconceptualize work altogether.

  13. Identification of Streptococcus pneumoniae lytA, plyA and psaA genes in pleural fluid by multiplex real-time PCR.

    Science.gov (United States)

    Sanz, Juan Carlos; Ríos, Esther; Rodríguez-Avial, Iciar; Ramos, Belén; Marín, Mercedes; Cercenado, Emilia

    2017-08-14

    The aim was to evaluate the utility of a multiplex real-time PCR to detect Streptococcus pneumoniae lytA, plyA and psaA genes in pleural fluid (PF). A collection of 81 PF samples was used. Sixty were considered positive for S. pneumoniae according to previous results (54 by an in-house lytA gene PCR and eight by universal rRNA PCR). The sensitivity for detection of the lytA, plyA and psaA genes by multiplex PCR was 100% (60/60), 98.3% (59/60) and 91.7% (55/60), respectively. The detection of all three genes was negative in 21 samples formerly confirmed as negative for S. pneumoniae (100% specificity) by the other procedures (9 by in-house lytA PCR and 12 by rRNA PCR). The use of this multiplex PCR may be a useful option to identify S. pneumoniae directly in PF samples. Copyright © 2017 Elsevier España, S.L.U. and Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica. All rights reserved.

  14. Multiplexed TES Bolometers on FIBRE, SPIFI, and SAFIRE

    Science.gov (United States)

    Staguhn, J. G.; Benford, D. J.; Irwin, K. D.; Moseley, S. H.; Pajot, F.; Shafer, R. A.; Stacey, G. J.

    2001-12-01

    We have produced a variety of Transition Edge Sensor (TES) bolometers using superconducting bilayers (MoAu and MoCu) with transitions between 300-500 mK. These have produced NEPs as low as 3x 10-17 W Hz-1/2. SQUID based time division multiplexers allow efficient readout with little noise cost. The multiplexed TESes were used in their first astronomical application in a recent observation with the FIBRE (Fabry Perot Interferometer Research Experiment) at the Caltech Submillimeter Observatory. We present lab results of improved performance devices and discuss designs for applications in large arrays (8x32 and larger) in the upcoming SPIFI and SAFIRE instruments.

  15. Multiplex real-time PCR assay for detection of Escherichia coli O157:H7 and screening for non-O157 Shiga toxin-producing E. coli.

    Science.gov (United States)

    Li, Baoguang; Liu, Huanli; Wang, Weimin

    2017-11-09

    Shiga toxin-producing Escherichia coli (STEC), including E. coli O157:H7, are responsible for numerous foodborne outbreaks annually worldwide. E. coli O157:H7, as well as pathogenic non-O157:H7 STECs, can cause life-threating complications, such as bloody diarrhea (hemolytic colitis) and hemolytic-uremic syndrome (HUS). Previously, we developed a real-time PCR assay to detect E. coli O157:H7 in foods by targeting a unique putative fimbriae protein Z3276. To extend the detection spectrum of the assay, we report a multiplex real-time PCR assay to specifically detect E. coli O157:H7 and screen for non-O157 STEC by targeting Z3276 and Shiga toxin genes (stx1 and stx2). Also, an internal amplification control (IAC) was incorporated into the assay to monitor the amplification efficiency. The multiplex real-time PCR assay was developed using the Life Technology ABI 7500 System platform and the standard chemistry. The optimal amplification mixture of the assay contains 12.5 μl of 2 × Universal Master Mix (Life Technology), 200 nM forward and reverse primers, appropriate concentrations of four probes [(Z3276 (80 nM), stx1 (80 nM), stx2 (20 nM), and IAC (40 nM)], 2 μl of template DNA, and water (to make up to 25 μl in total volume). The amplification conditions of the assay were set as follows: activation of TaqMan at 95 °C for 10 min, then 40 cycles of denaturation at 95 °C for 10 s and annealing/extension at 60 °C for 60 s. The multiplex assay was optimized for amplification conditions. The limit of detection (LOD) for the multiplex assay was determined to be 200 fg of bacterial DNA, which is equivalent to 40 CFU per reaction which is similar to the LOD generated in single targeted PCRs. Inclusivity and exclusivity determinants were performed with 196 bacterial strains. All E. coli O157:H7 (n = 135) were detected as positive and all STEC strains (n = 33) were positive for stx1, or stx2, or stx1 and stx2 (Table 1). No cross reactivity was detected with Salmonella

  16. The Relationship between Cell Number, Division Behavior and Developmental Potential of Cleavage Stage Human Embryos: A Time-Lapse Study.

    Directory of Open Access Journals (Sweden)

    Xiangyi Kong

    Full Text Available Day 3 cleavage embryo transfer is routine in many assisted reproductive technology centers today. Embryos are usually selected according to cell number, cell symmetry and fragmentation for transfer. Many studies have showed the relationship between cell number and embryo developmental potential. However, there is limited understanding of embryo division behavior and their association with embryo cell number and developmental potential. A retrospective and observational study was conducted to investigate how different division behaviors affect cell number and developmental potential of day 3 embryos by time-lapse imaging. Based on cell number at day 3, the embryos (from 104 IVF/intracytoplasmic sperm injection (ICSI treatment cycles, n = 799 were classified as follows: less than 5 cells (10C; n = 42. Division behavior, morphokinetic parameters and blastocyst formation rate were analyzed in 5 groups of day 3 embryos with different cell numbers. In 10C embryos increased compared to 7-8C embryos (45.8%, 33.3% vs. 11.1%, respectively. In ≥5C embryos, FR and DC significantly reduced developmental potential, whereas 10C. In NB embryos, the cell cycle elongation or shortening was the main cause for abnormally low or high cell number, respectively. After excluding embryos with abnormal division behaviors, the developmental potential, implantation rate and live birth rate of day 3 embryos increased with cell number.

  17. Development and evaluation of a multiplex real-time PCR assay for the detection and differentiation of Moraxella bovis, Moraxella bovoculi and Moraxella ovis in pure culture isolates and lacrimal swabs collected from conventionally raised cattle.

    Science.gov (United States)

    Shen, H G; Gould, S; Kinyon, J; Opriessnig, T; O'Connor, A M

    2011-11-01

    To develop a multiplex real-time PCR assay for the detection and differentiation of Moraxella bovis (M. bovis), M. bovoculi and M. ovis. The multiplex real-time PCR assay was validated on three reference strains, 57 pure culture isolates and 45 lacrimal swab samples. All reference strains were identified correctly with no cross-reactions between species. Sequencing of 53 of the 57 culture isolates confirmed the results obtained with the multiplex real-time PCR, and the assay had 96·5% (55/57) concordance with a Moraxella spp. multiplex conventional PCR assay on the isolates. Among the lacrimal swab samples, the concordance between the multiplex real-time PCR and culture was 86·7% (39/45) for M. bovoculi and 75·6% (34/45) for M. bovis. The multiplex real-time PCR assay is specific and sensitive and can be used directly on lacrimal swab samples. The lack of a rapid, specific and sensitive detection method is a barrier for determining the roles of M. bovis, M. bovoculi and M. ovis in infectious bovine keratoconjunctivitis cases, and the developed PCR assay will contribute to improved understanding of the epidemiology and pathogenesis of these three Moraxella species. © 2011 The Authors. Journal of Applied Microbiology © 2011 The Society for Applied Microbiology.

  18. Two-mode multiplexing at 2 × 10.7 Gbps over a 7-cell hollow-core photonic bandgap fiber

    DEFF Research Database (Denmark)

    Xu, Jing; Peucheret, Christophe; Lyngsø, Jens Kristian

    2012-01-01

    mode division multiplexing (MDM). In this work, we demonstrate MDM over a HC-PBGF for the first time. Two 10.7 Gbps channels are simultaneously transmitted over two modes of a 30-m long 7-cell HC-PBGF. Bit error ratio (BER) performances below the FEC threshold limit (3.3 × 10−3) are shown for both data...

  19. Ultra-High Capacity Silicon Photonic Interconnects through Spatial Multiplexing

    Science.gov (United States)

    Chen, Christine P.

    -fabrication. Through ModePROP simulations, optimizing device performance dynamically post-fabrication is analyzed, through either electro-optical or thermo-optical means. By biasing the arm introducing the slight spectral offset, we can quantifiably improve device performance. Scaling bandwidth is experimentally demonstrated through the device at 3 modes, 2 wavelengths, and 40 Gb/s data rate for 240 Gb/s aggregate bandwidth, with the potential to reduce power penalty per the device optimization process we described. A main motivation for this on-chip spatial multiplexing is the need to reduce costs. As the laser source serves as the greatest power consumer in an optical system, mode-division multiplexing and other forms of spatial multiplexing can be implemented to push its potentially prohibitive cost metrics down. In order to demonstrate an intelligent platform capable of dynamically multicasting data and reallocating power as needed by the system, we must first initialize the switch fabric to control with an electronic interface. A dithering mechanism, whereby exact cross, bar, and sub-percentage states are enforced through the device, is described here. Such a method could be employed for actuating the device table of bias values to states automatically. We then employ a dynamic power reallocation algorithm through a data acquisition unit, showing real-time channel recovery for channels experiencing power loss by diverting power from paths that could tolerate it. The data that is being multicast through the system is experimentally shown to be error-free at 40 Gb/s data rate, when transmitting from one to three clients and going from automatic bar/cross states to equalized power distribution. For the last portion of this topic, the switch fabric was inserted into a high-performance computing system. In order to run benchmarks at 10 Gb/s data ontop of the switch fabric, a newer model of the control plane was implemented to toggle states according to the command issued by the server

  20. Ultra-high-speed optical serial-to-parallel data conversion by time-domain optical Fourier transformation in a silicon nanowire

    DEFF Research Database (Denmark)

    Mulvad, Hans Christian Hansen; Palushani, Evarist; Hu, Hao

    2011-01-01

    We demonstrate conversion from 64 × 10 Gbit/s optical timedivision multiplexed (OTDM) data to dense wavelength division multiplexed (DWDM) data with 25 GHz spacing. The conversion is achieved by time-domain optical Fourier transformation (OFT) based on four-wave mixing (FWM) in a 3.6 mm long...

  1. Multiple Endonuclease Restriction Real-Time Loop-Mediated Isothermal Amplification: A Novel Analytically Rapid, Sensitive, Multiplex Loop-Mediated Isothermal Amplification Detection Technique.

    Science.gov (United States)

    Wang, Yi; Wang, Yan; Lan, Ruiting; Xu, Huaqing; Ma, Aijing; Li, Dongxun; Dai, Hang; Yuan, Xuejiao; Xu, Jianguo; Ye, Changyun

    2015-07-01

    Loop-mediated isothermal amplification (LAMP) is restricted to detecting a single target, limiting the usefulness of this method. To achieve multiplex LAMP-based detection, we developed a novel approach we called the multiple endonuclease restriction real-time-LAMP assay. In this system, the LAMP forward or backward inner primers contain 5' end short sequences that are recognized by the restriction endonuclease Nb.BsrDI, and the new forward or backward inner primers were modified at the 5' end with a fluorophore and in the middle with a dark quencher. Nb.BsrDI digests the newly synthesized double-stranded terminal sequences (5' end short sequences and their complementary sequences), which releases the quenching, resulting in a gain of signal. The assay permitted real-time detection of single or multiple target sequences in a single tube, and the positive results can be obtained in as short as 12 minutes. The novel methodology is highly efficient and specific, detecting down to 250 fg of DNA per reaction of Listeria DNA tested, and was successful in evaluating raw meat samples. The multiple endonuclease restriction real-time-LAMP technology, which is an extension of LAMP to accommodate robust, target-specific, and multiplex detection, provides a molecular diagnostic tool with less detection time and high sensitivity and specificity compared with those of LAMP and quantitative real-time PCR. Copyright © 2015 American Society for Investigative Pathology and the Association for Molecular Pathology. Published by Elsevier Inc. All rights reserved.

  2. A centrifugal direct recombinase polymerase amplification (direct-RPA) microdevice for multiplex and real-time identification of food poisoning bacteria.

    Science.gov (United States)

    Choi, Goro; Jung, Jae Hwan; Park, Byung Hyun; Oh, Seung Jun; Seo, Ji Hyun; Choi, Jong Seob; Kim, Do Hyun; Seo, Tae Seok

    2016-06-21

    In this study, we developed a centrifugal direct recombinase polymerase amplification (direct-RPA) microdevice for multiplex and real-time identification of food poisoning bacteria contaminated milk samples. The microdevice was designed to contain identical triplicate functional units and each unit has four reaction chambers, thereby making it possible to perform twelve direct-RPA reactions simultaneously. The integrated microdevice consisted of two layers: RPA reagents were injected in the top layer, while spiked milk samples with food poisoning bacteria were loaded into sample reservoirs in the bottom layer. For multiplex bacterial detection, the target gene-specific primers and probes were dried in each reaction chamber. The introduced samples and reagents could be equally aliquoted and dispensed into each reaction chamber by centrifugal force, and then the multiplex direct-RPA reaction was executed. The target genes of bacteria spiked in milk could be amplified at 39 °C without a DNA extraction step by using the direct-RPA cocktails, which were a combination of a direct PCR buffer and RPA enzymes. As the target gene amplification proceeded, the increased fluorescence signals coming from the reaction chambers were recorded in real-time at an interval of 2 min. The entire process, including the sample distribution, the direct-RPA reaction, and the real-time analysis, was accomplished with a custom-made portable genetic analyzer and a miniaturized optical detector. Monoplex, duplex, and triplex food poisoning bacteria (Salmonella enterica, Escherichia coli O157:H7, and Vibrio parahaemolyticus) detection was successfully performed with a detection sensitivity of 4 cells per 3.2 μL of milk samples within 30 min. By implementing the direct-PRA on the miniaturized centrifugal microsystem, the on-site food poisoning bacteria analysis would be feasible with high speed, sensitivity, and multiplicity.

  3. Comparison of multiplex RT-PCR and real-time HybProbe assay for serotyping of dengue virus using reference strains and clinical samples from India

    Directory of Open Access Journals (Sweden)

    Anita Chakravarti

    2016-01-01

    Full Text Available Background: Dengue virus serotyping is crucial from clinical management and epidemiological point of view. Aims: To compare efficacy of two molecular detection and typing methods, namely, multiplex reverse transcription polymerase chain reaction (RT-PCR and real-time Hybprobe assay using a panel of known dilution of four reference Dengue virus strains and a panel of sera collected from clinically suspected dengue patients. Settings: This study was conducted at a tertiary-care teaching hospital in Delhi, India. Materials and Methods: Dengue serotype specific virus strains were used as prototypes for serotyping assays. Viral load was quantified by quantitative real time reverse transcription polymerase chain reaction (qRT-PCR. Acute phase serum samples were collected from 79 patients with clinically suspected Dengue fever on their first day of presentation during September-October 2012. Viral RNA from serum and cell culture supernatant was extracted. Reverse transcription was carried out. Quantitative detection of DENV RNA from reference strain culture supernatants and each of the 79 patient samples by real-time PCR was performed using light cycler Taqman master mix kit. Serotyping was done by multiplex RT-PCR assay and Hybprobe assay. Results: The multiplex RT-PCR assay, though found to be 100% specific, couldn't serotype either patient or reference strains with viral load less than 1000 RNA copies/ml. The Hybprobe assay was found to have 100% specificity and had a lower limit of serotype detection of merely 3.54 RNA copies/ml. Conclusions: HybProbe assay has an important role especially in situations where serotyping is to be performed in clinical samples with low viral load.

  4. Coherence-Multiplexed Optical RF Feeder Networks

    NARCIS (Netherlands)

    Meijerink, Arjan; Taniman, R.O.; van Etten, Wim

    2007-01-01

    An optical RF feeding system for wireless access is proposed, in which the radio access points are distinguished by means of coherence multiplexing (CM). CM is a rather unknown and potentially inexpensive optical code division multiple access technique, which is particularly suitable for relatively

  5. Detection of Salmonella in Shellfish Using SYBR Green™ I-Based Real-Time Multiplexed PCR Assay Targeting invA and spvB

    KAUST Repository

    Gangwar, Maulshree

    2012-09-23

    A SYBR Green™ I-based real-time multiplexed PCR assay was developed targeting invA and spvB for the detection of Salmonella strains in shellfish after both hns and invA genes were identified in all Salmonella strains. Simultaneously, the 16S rRNA gene was used as a PCR internal amplification control (IAC). All 89 Salmonella strains tested in this study exhibited amplification of invA, whereas only 21 (23. 6 %) were PCR positive for spvB. The sensitivity of detection of all three targeted genes was 1 ng, which is equivalent to approximately 105 colony-forming unit (CFU) of Salmonella enterica. The analysis showed specific PCR products that were identified by reproducible melt temperature profiles (invA, 84. 27 ± 1. 7 °C; spvB, 88. 76 ± 1. 0 °C; and 16S rRNA gene, 87. 16 ± 0. 8 °C). The sensitivity of detection was 10 pg purified DNA (invA) or 105 CFU in 1 mL pure culture of S. enterica ATCC 14028. The above molecular detection method for Salmonella strains was successfully applied to the oyster homogenates (food matrix). An initial inoculum of 106 and 102 CFU Salmonella in 1 ml seeded oyster tissue homogenate was detected by multiplexed PCR for all three genes after 5 and 24 h of enrichment, respectively. Natural oysters isolated from Gulf of Mexico during the winter months exhibited negative PCR amplification results suggesting the absence of Salmonella. In contrast to conventional PCR, real-time multiplex PCR assay developed in this study is rapid and sensitive and will help Interstate Shellfish Sanitation Conference undertake appropriate measures to monitor Salmonella in oysters, thereby preventing disease outbreaks and consequently protecting consumer health. © 2012 Springer Science+Business Media, LLC.

  6. The Multiplex Dependency Structure of Financial Markets

    Directory of Open Access Journals (Sweden)

    Nicolò Musmeci

    2017-01-01

    Full Text Available We propose here a multiplex network approach to investigate simultaneously different types of dependency in complex datasets. In particular, we consider multiplex networks made of four layers corresponding, respectively, to linear, nonlinear, tail, and partial correlations among a set of financial time series. We construct the sparse graph on each layer using a standard network filtering procedure, and we then analyse the structural properties of the obtained multiplex networks. The study of the time evolution of the multiplex constructed from financial data uncovers important changes in intrinsically multiplex properties of the network, and such changes are associated with periods of financial stress. We observe that some features are unique to the multiplex structure and would not be visible otherwise by the separate analysis of the single-layer networks corresponding to each dependency measure.

  7. Generalized space-time supersymmetries, division algebras and octonionic M-theory

    Energy Technology Data Exchange (ETDEWEB)

    Lukierski, Jerzy [University of Wroclaw (Poland). Inst. for Theoretical Physics]. E-mail: lukier@ift.uni.wroc.pl; Toppan, Francesco [Centro Brasileiro de Pesquisas Fisicas (CBPF), Rio de Janeiro, RJ (Brazil). Coordenacao de Teoria de Campos e Particulas]. E-mail: toppan@cbpf.br

    2002-03-01

    We describe the set of generalized Poincare and conformal superalgebras in D= 4,5 and 7 dimensions as two sequences of superalgebraic structures, taking values in the division algebras R, C and H. The generalized conformal superalgebras are described for D = 4 by OSp(1;8|R), for D = 5 by SU(4,4;1) and for D = 7 by U{sub {alpha}}U (8;1|H). The relation with other schemes, in particular the framework of conformal spin (super) algebras and Jordan (super) algebras is discussed. By extending the division-algebra-valued super-algebras to octonions we get in D= 11 an octonionic generalized Poincare superalgebra, which we call octonionic M-algebra, describing the octonionic M-theory. It contains 32 real supercharges but, due to the octonionic structure only 52 real bosonic generators remain independent in place of the 528 bosonic charges of standard M-algebra. In octonionic M-theory there is a sort of equivalence between the octonionic M2 (supermembrane) and the octonionic M5 (super-5-brane) sectors. We also define the octonionic generalized conformal M-superalgebra with 239 bosonic generators. (author)

  8. Multiplex real-time PCR monitoring of intestinal helminths in humans reveals widespread polyparasitism in Northern Samar, the Philippines.

    Science.gov (United States)

    Gordon, Catherine A; McManus, Donald P; Acosta, Luz P; Olveda, Remigio M; Williams, Gail M; Ross, Allen G; Gray, Darren J; Gobert, Geoffrey N

    2015-06-01

    The global socioeconomic importance of helminth parasitic disease is underpinned by the considerable clinical impact on millions of people. While helminth polyparasitism is considered common in the Philippines, little has been done to survey its extent in endemic communities. High morphological similarity of eggs between related species complicates conventional microscopic diagnostic methods which are known to lack sensitivity, particularly in low intensity infections. Multiplex quantitative PCR diagnostic methods can provide rapid, simultaneous identification of multiple helminth species from a single stool sample. We describe a multiplex assay for the differentiation of Ascaris lumbricoides, Necator americanus, Ancylostoma, Taenia saginata and Taenia solium, building on our previously published findings for Schistosoma japonicum. Of 545 human faecal samples examined, 46.6% were positive for at least three different parasite species. High prevalences of S. japonicum (90.64%), A. lumbricoides (58.17%), T. saginata (42.57%) and A. duodenale (48.07%) were recorded. Neither T. solium nor N. americanus were found to be present. The utility of molecular diagnostic methods for monitoring helminth parasite prevalence provides new information on the extent of polyparasitism in the Philippines municipality of Palapag. These methods and findings have potential global implications for the monitoring of neglected tropical diseases and control measures. Copyright © 2015 Australian Society for Parasitology Inc. Published by Elsevier Ltd. All rights reserved.

  9. Multiplex real-time PCR assays for detection of eight Shiga toxin-producing Escherichia coli in food samples by melting curve analysis.

    Science.gov (United States)

    Singh, Prashant; Mustapha, Azlin

    2015-12-23

    Shiga toxin-producing Escherichia coli (STEC) are pathogenic strains of E. coli that can cause bloody diarrhea and kidney failure. Seven STEC serogroups, O157, O26, O45, O103, O111, O121 and O145 are responsible for more than 71% of the total infections caused by this group of pathogens. All seven serogroups are currently considered as adulterants in non-intact beef products in the U.S. In this study, two multiplex melt curve real-time PCR assays with internal amplification controls (IACs) were standardized for the detection of eight STEC serogroups. The first multiplex assay targeted E. coli serogroups O145, O121, O104, and O157; while the second set detected E. coli serogroups O26, O45, O103 and O111. The applicability of the assays was tested using 11 different meat and produce samples. For food samples spiked with a cocktail of four STEC serogroups with a combined count of 10 CFU/25 g food, all targets of the multiplex assays were detected after an enrichment period of 6h. The assays also worked efficiently when 325 g of food samples were spiked with 10 CFU of STECs. The assays are not dependent on fluorescent-labeled probes or immunomagnetic beads, and can be used for the detection of eight STEC serogroups in less than 11h. Routine preliminary screening of STECs in food samples is performed by testing for the presence of STEC virulence genes. The assays developed in this study can be useful as a first- or second-tier test for the identification of the eight O serogroup-specific genes in suspected food samples. Copyright © 2015. Published by Elsevier B.V.

  10. One-step multiplex real time RT-PCR for the detection of bovine respiratory syncytial virus, bovine herpesvirus 1 and bovine parainfluenza virus 3.

    Science.gov (United States)

    Thonur, Leenadevi; Maley, Madeleine; Gilray, Janice; Crook, Tara; Laming, Ellie; Turnbull, Dylan; Nath, Mintu; Willoughby, Kim

    2012-03-28

    Detection of respiratory viruses in veterinary species has traditionally relied on virus detection by isolation or immunofluorescence and/or detection of circulating antibody using ELISA or serum neutralising antibody tests. Multiplex real time PCR is increasingly used to diagnose respiratory viruses in humans and has proved to be superior to traditional methods. Bovine respiratory disease (BRD) is one of the most common causes of morbidity and mortality in housed cattle and virus infections can play a major role. We describe here a one step multiplex reverse transcriptase quantitative polymerase chain reaction (mRT-qPCR) to detect the viruses commonly implicated in BRD. A mRT-qPCR assay was developed and optimised for the simultaneous detection of bovine respiratory syncytial virus (BRSV), bovine herpes virus type 1 (BoHV-1) and bovine parainfluenza virus type 3 (BPI3 i & ii) nucleic acids in clinical samples from cattle. The assay targets the highly conserved glycoprotein B gene of BoHV-1, nucleocapsid gene of BRSV and nucleoprotein gene of BPI3. This mRT-qPCR assay was assessed for sensitivity, specificity and repeatability using in vitro transcribed RNA and recent field isolates. For clinical validation, 541 samples from clinically affected animals were tested and mRT-qPCR result compared to those obtained by conventional testing using virus isolation (VI) and/or indirect fluorescent antibody test (IFAT). The mRT-qPCR assay was rapid, highly repeatable, specific and had a sensitivity of 97% in detecting 102 copies of BRSV, BoHV-1 and BPI3 i & ii. This is the first mRT-qPCR developed to detect the three primary viral agents of BRD and the first multiplex designed using locked nucleic acid (LNA), minor groove binding (MGB) and TaqMan probes in one reaction mix. This test was more sensitive than both VI and IFAT and can replace the aforesaid methods for virus detection during outbreaks of BRD.

  11. Evaluation of a real-time multiplex PCR for the simultaneous detection of Campylobacter jejuni, Salmonella spp., Shigella spp./EIEC, and Yersinia enterocolitica in fecal samples.

    Science.gov (United States)

    Van Lint, P; De Witte, E; De Henau, H; De Muynck, A; Verstraeten, L; Van Herendael, B; Weekx, S

    2015-03-01

    Conventional diagnosis of infectious diarrhea caused by bacteria is time-consuming, labor-intensive, and has a suboptimal sensitivity. We have therefore developed a multiplex real-time polymerase chain reaction (PCR) for the simultaneous detection of Campylobacter jejuni, Salmonella spp., Shigella spp./enteroinvasive Escherichia coli (EIEC), and Yersinia enterocolitica in fecal samples. No cross reactivity between the different pathogens was observed, and the multiplex setup of the assay did not have an impact on the sensitivity of the PCR. The analytical sensitivity was 87 CFU/mL for C. jejuni, 61 CFU/mL for Shigella spp./EIEC, 5,528 CFU/mL for Salmonella spp., and 1,306 CFU/mL for Y. enterocolitica. An extensive validation of the assay was performed by testing 1,687 patient samples by both PCR and with conventional techniques. The use of PCR increased the overall clinical sensitivity from 78 to 100 % (p PCR, compared with 99.9 % for conventional culture. The novel PCR assay allows for rapid, sensitive, inexpensive, and high-throughput testing of the most common bacterial causes of gastroenteritis.

  12. Simultaneous detection and differentiation of three Potyviridae viruses in sweet potato by a multiplex TaqMan real time RT-PCR assay.

    Science.gov (United States)

    Lan, Pingxiu; Li, Fan; Abad, Jorge; Pu, Lingling; Li, Ruhui

    2018-02-01

    A multiplex TaqMan real time RT-PCR was developed for detection and differentiation of Sweet potato virus G, Sweet potato latent virus and Sweet potato mild mottle virus in one tube. Amplification and detection of a fluorogenic cytochrome oxidase gene was included as an internal control. The assay was compared with a multiplex RT-PCR developed in the initial study for the detection and differentiation of the three viruses and host 18S rRNA. Primers and/or probes of the two assays were designed from conserved regions of each virus. The two assays were optimized for primers/probes and primer concentrations and thermal cycling conditions. Sensitivity and specificity of the assays were compared each other and with other assay. Both assays were evaluated by 74 field samples original from five different provinces of China. showed that the TaqMan real time RT-PCR offered rapid, sensitive, effective and reliable for the simultaneous detection and differentiation of the three viruses in sweet potato plants. The assay will be useful to quarantine and certification programs and virus surveys when large numbers of samples are tested. Copyright © 2017. Published by Elsevier B.V.

  13. A novel enterovirus and parechovirus multiplex one-step real-time PCR-validation and clinical experience

    DEFF Research Database (Denmark)

    Nielsen, A. C. Y.; Bottiger, B.; Midgley, S. E.

    2013-01-01

    testing and routine usage. During 15 months of routine use, from October 2008 to December 2009, we received and analysed 2187 samples (stool samples, cerebrospinal fluids, blood samples, respiratory samples and autopsy samples) were tested, from 1546 patients and detected enteroviruses and parechoviruses...... in 171 (8%) and 66(3%) of the samples, respectively. 180 of the positive samples could be genotyped by PCR and sequencing and the most common genotypes found were human parechovirus type 3, echovirus 9, enterovirus 71, Coxsackievirus A16, and echovirus 25. During 2009 in Denmark, both enterovirus...... and human parechovirus type 3 had a similar seasonal pattern with a peak during the summer and autumn. Human parechovirus type 3 was almost invariably found in children less than 4 months of age. In conclusion, a multiplex assay was developed allowing simultaneous detection of 2 viruses, which can cause...

  14. Development and validation of a multiplex real-time PCR method to simultaneously detect 47 targets for the identification of genetically modified organisms.

    Science.gov (United States)

    Cottenet, Geoffrey; Blancpain, Carine; Sonnard, Véronique; Chuah, Poh Fong

    2013-08-01

    Considering the increase of the total cultivated land area dedicated to genetically modified organisms (GMO), the consumers' perception toward GMO and the need to comply with various local GMO legislations, efficient and accurate analytical methods are needed for their detection and identification. Considered as the gold standard for GMO analysis, the real-time polymerase chain reaction (RTi-PCR) technology was optimised to produce a high-throughput GMO screening method. Based on simultaneous 24 multiplex RTi-PCR running on a ready-to-use 384-well plate, this new procedure allows the detection and identification of 47 targets on seven samples in duplicate. To comply with GMO analytical quality requirements, a negative and a positive control were analysed in parallel. In addition, an internal positive control was also included in each reaction well for the detection of potential PCR inhibition. Tested on non-GM materials, on different GM events and on proficiency test samples, the method offered high specificity and sensitivity with an absolute limit of detection between 1 and 16 copies depending on the target. Easy to use, fast and cost efficient, this multiplex approach fits the purpose of GMO testing laboratories.

  15. Real-time, multiplexed electrochemical DNA detection using an active complementary metal-oxide-semiconductor biosensor array with integrated sensor electronics

    Science.gov (United States)

    Levine, Peter M.; Gong, Ping; Levicky, Rastislav; Shepard, Kenneth L.

    2009-01-01

    Optical biosensing based on fluorescence detection has arguably become the standard technique for quantifying extents of hybridization between surface-immobilized probes and fluorophore-labeled analyte targets in DNA microarrays. However, electrochemical detection techniques are emerging which could eliminate the need for physically bulky optical instrumentation, enabling the design of portable devices for point-of-care applications. Unlike fluorescence detection, which can function well using a passive substrate (one without integrated electronics), multiplexed electrochemical detection requires an electronically-active substrate to analyze each array site and benefits from the addition of integrated electronic instrumentation to further reduce platform size and eliminate the electromagnetic interference that can result from bringing non-amplified signals off chip. We report on an active electrochemical biosensor array, constructed with a standard complementary metal-oxide-semiconductor (CMOS) technology, to perform quantitative DNA hybridization detection on chip using targets conjugated with ferrocene redox labels. A 4×4 array of gold working electrodes and integrated potentiostat electronics, consisting of control amplifiers and current-input analog-to-digital converters, on a custom-designed 5×3 mm2 CMOS chip drive redox reactions using cyclic voltammetry, sense DNA binding, and transmit digital data off chip for analysis. We demonstrate multiplexed and specific detection of DNA targets as well as real-time monitoring of hybridization, a task that is difficult, if not impossible, with traditional fluorescence-based microarrays. PMID:19054661

  16. High-throughput multiplex real-time PCR assay for the simultaneous quantification of DNA and RNA viruses infecting cassava plants.

    Science.gov (United States)

    Otti, G; Bouvaine, S; Kimata, B; Mkamillo, G; Kumar, P L; Tomlins, K; Maruthi, M N

    2016-05-01

    To develop a multiplex TaqMan-based real-time PCR assay (qPCR) for the simultaneous detection and quantification of both RNA and DNA viruses affecting cassava (Manihot esculenta) in eastern Africa. The diagnostic assay was developed for two RNA viruses; Cassava brown streak virus (CBSV) and Uganda cassava brown streak virus (UCBSV) and two predominant DNA viruses; African cassava mosaic virus (ACMV) and East African cassava mosaic virus (EACMV), which cause the economically important cassava brown streak disease (CBSD) and cassava mosaic disease (CMD) respectively. Our method, developed by analysing PCR products of viruses, was highly sensitive to detect target viruses from very low quantities of 4-10 femtograms. Multiplexing did not diminish sensitivity or accuracy compared to uniplex alternatives. The assay reliably detected and quantified four cassava viruses in field samples where CBSV and UCBSV synergy was observed in majority of mixed-infected varieties. We have developed a high-throughput qPCR diagnostic assay capable of specific and sensitive quantification of predominant DNA and RNA viruses of cassava in eastern Africa. The qPCR methods are a great improvement on the existing methods and can be used for monitoring virus spread as well as for accurate evaluation of the cassava varieties for virus resistance. © 2016 The Society for Applied Microbiology.

  17. Performance analysis of an OAM multiplexing-based MIMO FSO system over atmospheric turbulence using space-time coding with channel estimation.

    Science.gov (United States)

    Zhang, Yan; Wang, Ping; Guo, Lixin; Wang, Wei; Tian, Hongxin

    2017-08-21

    The average bit error rate (ABER) performance of an orbital angular momentum (OAM) multiplexing-based free-space optical (FSO) system with multiple-input multiple-output (MIMO) architecture has been investigated over atmospheric turbulence considering channel estimation and space-time coding. The impact of different types of space-time coding, modulation orders, turbulence strengths, receive antenna numbers on the transmission performance of this OAM-FSO system is also taken into account. On the basis of the proposed system model, the analytical expressions of the received signals carried by the k-th OAM mode of the n-th receive antenna for the vertical bell labs layered space-time (V-Blast) and space-time block codes (STBC) are derived, respectively. With the help of channel estimator carrying out with least square (LS) algorithm, the zero-forcing criterion with ordered successive interference cancellation criterion (ZF-OSIC) equalizer of V-Blast scheme and Alamouti decoder of STBC scheme are adopted to mitigate the performance degradation induced by the atmospheric turbulence. The results show that the ABERs obtained by channel estimation have excellent agreement with those of turbulence phase screen simulations. The ABERs of this OAM multiplexing-based MIMO system deteriorate with the increase of turbulence strengths. And both V-Blast and STBC schemes can significantly improve the system performance by mitigating the distortions of atmospheric turbulence as well as additive white Gaussian noise (AWGN). In addition, the ABER performances of both space-time coding schemes can be further enhanced by increasing the number of receive antennas for the diversity gain and STBC outperforms V-Blast in this system for data recovery. This work is beneficial to the OAM FSO system design.

  18. Lineage correlations of single cell division time as a probe of cell-cycle dynamics.

    Science.gov (United States)

    Sandler, Oded; Mizrahi, Sivan Pearl; Weiss, Noga; Agam, Oded; Simon, Itamar; Balaban, Nathalie Q

    2015-03-26

    Stochastic processes in cells are associated with fluctuations in mRNA, protein production and degradation, noisy partition of cellular components at division, and other cell processes. Variability within a clonal population of cells originates from such stochastic processes, which may be amplified or reduced by deterministic factors. Cell-to-cell variability, such as that seen in the heterogeneous response of bacteria to antibiotics, or of cancer cells to treatment, is understood as the inevitable consequence of stochasticity. Variability in cell-cycle duration was observed long ago; however, its sources are still unknown. A central question is whether the variance of the observed distribution originates from stochastic processes, or whether it arises mostly from a deterministic process that only appears to be random. A surprising feature of cell-cycle-duration inheritance is that it seems to be lost within one generation but to be still present in the next generation, generating poor correlation between mother and daughter cells but high correlation between cousin cells. This observation suggests the existence of underlying deterministic factors that determine the main part of cell-to-cell variability. We developed an experimental system that precisely measures the cell-cycle duration of thousands of mammalian cells along several generations and a mathematical framework that allows discrimination between stochastic and deterministic processes in lineages of cells. We show that the inter- and intra-generation correlations reveal complex inheritance of the cell-cycle duration. Finally, we build a deterministic nonlinear toy model for cell-cycle inheritance that reproduces the main features of our data. Our approach constitutes a general method to identify deterministic variability in lineages of cells or organisms, which may help to predict and, eventually, reduce cell-to-cell heterogeneity in various systems, such as cancer cells under treatment.

  19. Efficient exploration of multiplex networks

    Science.gov (United States)

    Battiston, Federico; Nicosia, Vincenzo; Latora, Vito

    2016-04-01

    Efficient techniques to navigate networks with local information are fundamental to sample large-scale online social systems and to retrieve resources in peer-to-peer systems. Biased random walks, i.e. walks whose motion is biased on properties of neighbouring nodes, have been largely exploited to design smart local strategies to explore a network, for instance by constructing maximally mixing trajectories or by allowing an almost uniform sampling of the nodes. Here we introduce and study biased random walks on multiplex networks, graphs where the nodes are related through different types of links organised in distinct and interacting layers, and we provide analytical solutions for their long-time properties, including the stationary occupation probability distribution and the entropy rate. We focus on degree-biased random walks and distinguish between two classes of walks, namely those whose transition probability depends on a number of parameters which is extensive in the number of layers, and those whose motion depends on intrinsically multiplex properties of the neighbouring nodes. We analyse the effect of the structure of the multiplex network on the steady-state behaviour of the walkers, and we find that heterogeneous degree distributions as well as the presence of inter-layer degree correlations and edge overlap determine the extent to which a multiplex can be efficiently explored by a biased walk. Finally we show that, in real-world multiplex transportation networks, the trade-off between efficient navigation and resilience to link failure has resulted into systems whose diffusion properties are qualitatively different from those of appropriately randomised multiplex graphs. This fact suggests that multiplexity is an important ingredient to include in the modelling of real-world systems.

  20. Molecular detection of human Plasmodium species in Sabah using PlasmoNex™ multiplex PCR and hydrolysis probes real-time PCR.

    Science.gov (United States)

    Lee, Ping Chin; Chong, Eric Tzyy Jiann; Anderios, Fread; Al Lim, Yvonne; Chew, Ching Hoong; Chua, Kek Heng

    2015-01-28

    Malaria is a vector borne-parasitic disease transmitted through the bite of the infective female Anopheles mosquitoes. Five Plasmodium species have been recognized by World Health Organization (WHO) as the causative agents of human malaria. Generally, microscopic examination is the gold standard for routine malaria diagnosis. However, molecular PCR assays in many cases have shown improvement on the sensitivity and specificity over microscopic or other immunochromatographic assays. The present study attempts to screen 207 suspected malaria samples from patients seeking treatment in clinics around Sabah state, Malaysia, using two panels of multiplex PCRs, conventional PCR system (PlasmoNex™) and real-time PCR based on hydrolysis probe technology. Discordance results between two PCR assays were further confirmed by sequencing using 18S ssu rRNA species-specific primers. Of the 207 malaria samples, Plasmodium knowlesi (73.4% vs 72.0%) was the most prevalent species based on two PCR assays, followed by Plasmodium falciparum (15.9% vs 17.9%), and Plasmodium vivax (9.7% vs 7.7%), respectively. Neither Plasmodium malariae nor Plasmodium ovale was detected in this study. Nine discrepant species identification based on both the PCR assays were further confirmed through DNA sequencing. Species-specific real-time PCR only accurately diagnosed 198 of 207 (95.7%) malaria samples up to species level in contrast to PlasmoNex™ assay which had 100% sensitivity and specificity based on sequencing results. Multiplex PCR accelerate the speed in the diagnosis of malaria. The PlasmoNex™ PCR assay seems to be more accurate than real-time PCR in the speciation of all five human malaria parasites. The present study also showed a significant increase of the potential fatal P. knowlesi infection in Sabah state as revealed by molecular PCR assays.

  1. A design of a wavelength-hopping time-spreading incoherent optical code division multiple access system

    International Nuclear Information System (INIS)

    Glesk, I.; Baby, V.

    2005-01-01

    We present the architecture and code design for a highly scalable, 2.5 Gb/s per user optical code division multiple access (OCDMA) system. The system is scalable to 100 potential and more than 10 simultaneous users, each with a bit error rate (BER) of less than 10 -9 . The system architecture uses a fast wavelength-hopping, time-spreading codes. Unlike frequency and phase sensitive coherent OCDMA systems, this architecture utilizes standard on off keyed optical pulses allocated in the time and wavelength dimensions. This incoherent OCDMA approach is compatible with existing WDM optical networks and utilizes off the shelf components. We discuss the novel optical subsystem design for encoders and decoders that enable the realization of a highly scalable incoherent OCDMA system with rapid reconfigurability. A detailed analysis of the scalability of the two dimensional code is presented and select network deployment architectures for OCDMA are discussed (Authors)

  2. Development and Clinical Validation of a Multiplex Real-Time Quantitative PCR Assay for Human Infection by Anaplasma phagocytophilum and Ehrlichia chaffeensis

    Directory of Open Access Journals (Sweden)

    Megan E. Reller

    2018-01-01

    Full Text Available Background: Human granulocytic anaplasmosis (HGA, caused by Anaplasma phagocytophilum, and human monocytic ehrlichiosis (HME, caused by Ehrlichia chaffeensis, often present as undifferentiated fever but are not treated by typical empiric regimens for acute febrile illness. Their role as agents of vector-borne febrile disease in tropical regions is more poorly studied than for other rickettsial infections. Limitations in diagnosis have impaired epidemiologic and clinical research and needless morbidity and mortality occur due to untreated illness. Methods: We designed and clinically validated a multiplex real-time quantitative PCR assay for Anaplasma phagocytophilum and Ehrlichia chaffeensis using samples confirmed by multiple gold-standard methods. Results: Clinical sensitivity and specificity for A. phagocytophilum were 100% (39/39 and 100% (143/143, respectively, and for E. chaffeensis 95% (20/21 and 99% (159/161, respectively. Conclusions: These assays could support early diagnosis and treatment as well as the high-throughput testing required for large epidemiologic studies.

  3. Time multiplexed deep reactive ion etching of germanium and silicon-A comparison of mechanisms and application to x-ray optics.

    Science.gov (United States)

    Genova, Vincent J; Agyeman-Budu, David N; Woll, Arthur R

    2018-01-01

    Although the mechanisms of deep reactive ion etching (DRIE) of silicon have been reported extensively, very little by comparison has been discussed concerning DRIE of germanium. By directly comparing silicon and germanium etching in a time multiplexed DRIE process, the authors extract significant differences in etch mechanisms from a design of experiment and discuss how these differences are relevant to the design and fabrication of silicon and germanium collimating channel array x-ray optics. The differences are illuminated by characteristics such as reactive ion etching (RIE)-lag, aspect ratio dependent etching, and sidewall passivation. Specifically, the authors demonstrate the more severe nature of RIE-lag in germanium, especially at aspect ratios exceeding 13:1. In addition, the differences in the profile evolution between silicon and germanium are shown to be a result of differences in sidewall passivation. There is also a correlation between the different sidewall passivation and the inherent lack of scalloping in the case of germanium DRIE.

  4. Development of multiplex real-time polymerase chain reaction for detection of Entamoeba histolytica, Entamoeba dispar, and Entamoeba moshkovskii in clinical specimens.

    Science.gov (United States)

    Hamzah, Zulhainan; Petmitr, Songsak; Mungthin, Mathirut; Leelayoova, Saovanee; Chavalitshewinkoon-Petmitr, Porntip

    2010-10-01

    Multiplex real-time polymerase chain reaction (PCR) was developed for differential detection of Entamoeba histolytica, Entamoeba dispar, and Entamoeba moshkovskii. Specific primers were designed for all three species, and then differentiation of E. histolytica and E. dispar was achieved simultaneously using a hybridization probe and melting curve analysis, whereas E. moshkovskii was detected with a separate probe under the same condition. This assay detected as little as 0.2 pg of E. histolytica DNA and 2 pg each for E. dispar and E. moshkovskii DNA. Thirty-five clinical samples suspected to be E. histolytica infection by microscopy were tested. The results showed 32 positive samples; four samples were E. histolytica and 28 samples were E. dispar. Interestingly, one E. dispar positive sample showed a mixed infection with E. moshkovskii. This is the first report of E. moshkovskii infection from Thailand and this assay is currently the most rapid and sensitive method to differentiate these human amoebas.

  5. A novel multiplex real-time PCR assay for the concurrent detection of hepatitis A, B and C viruses in patients with acute hepatitis.

    Science.gov (United States)

    Park, Yongjung; Kim, Beom Seok; Choi, Kyu Hun; Shin, Dong Ho; Lee, Mi Jung; Cho, Yonggeun; Kim, Hyon-Suk

    2012-01-01

    A novel multiplex real-time PCR assay for concurrent detection of hepatitis viruses was evaluated for its clinical performance in screening patients with acute hepatitis. A total of 648 serum samples were collected from patients with acute symptoms of hepatitis. Concurrent detection of nucleic acids of HAV, HBV and HCV was performed using the Magicplex™ HepaTrio Real-time Detection test. Serum nucleic acid levels of HBV and HCV were also quantified by the Cobas® AmpliPrep/Cobas® TaqMan® (CAP/CTM) HBV and HCV tests. Patients' medical records were also reviewed. Concordance rates between the results from the HepaTrio and the CAP/CTM tests for the detection of HBV and HCV were 94.9% (k = 0.88) and 99.2% (k = 0.98), respectively. The cycle threshold values with the HepaTrio test were also correlated well with the levels of HBV DNA (r = -0.9230) and HCV RNA (r = -0.8458). The sensitivity and specificity of the HepaTrio test were 93.8% and 98.2%, respectively, for detecting HBV infection, and 99.1% and 100.0%, respectively, for HCV infection. For the HepaTrio test, 21 (3.2%) cases were positive for both HBV and HCV. Among the positive cases, 6 (0.9%) were true coinfections. This test also detected 18 (2.8%) HAV positives. The HepaTrio test demonstrated good clinical performance and produced results that agreed well with those of the CAP/CTM assays, especially for the detection of HCV. This assay was also able to detect HAV RNA from anti-HAV IgM-positive individuals. Therefore, this new multiplex PCR assay could be useful for the concurrent detection of the three hepatitis viruses.

  6. In-operando synchronous time-multiplexed O K-edge x-ray absorption spectromicroscopy of functioning tantalum oxide memristors

    Energy Technology Data Exchange (ETDEWEB)

    Kumar, Suhas [Hewlett-Packard Laboratories, 1501 Page Mill Road, Palo Alto, California 94304 (United States); Department of Electrical Engineering, Stanford University, Stanford, California 94305 (United States); Graves, Catherine E.; Strachan, John Paul, E-mail: john-paul.strachan@hp.com; Williams, R. Stanley [Hewlett-Packard Laboratories, 1501 Page Mill Road, Palo Alto, California 94304 (United States); Kilcoyne, A. L. David; Tyliszczak, Tolek [Advanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (United States); Nishi, Yoshio [Department of Electrical Engineering, Stanford University, Stanford, California 94305 (United States)

    2015-07-21

    Memristors are receiving keen interest because of their potential varied applications and promising large-scale information storage capabilities. Tantalum oxide is a memristive material that has shown promise for high-performance nonvolatile computer memory. The microphysics has been elusive because of the small scale and subtle physical changes that accompany conductance switching. In this study, we probed the atomic composition, local chemistry, and electronic structure of functioning tantalum oxide memristors through spatially mapped O K-edge x-ray absorption. We developed a time-multiplexed spectromicroscopy technique to enhance the weak and possibly localized oxide modifications with spatial and spectral resolutions of <30 nm and 70 meV, respectively. During the initial stages of conductance switching of a micrometer sized crosspoint device, the spectral changes were uniform within the spatial resolution of our technique. When the device was further driven with millions of high voltage-pulse cycles, we observed lateral motion and separation of ∼100 nm-scale agglomerates of both oxygen interstitials and vacancies. We also demonstrate a unique capability of this technique by identifying the relaxation behavior in the material during electrical stimuli by identifying electric field driven changes with varying pulse widths. In addition, we show that changes to the material can be localized to a spatial region by modifying its topography or uniformity, as against spatially uniform changes observed here during memristive switching. The goal of this report is to introduce the capability of time-multiplexed x-ray spectromicroscopy in studying weak-signal transitions in inhomogeneous media through the example of the operation and temporal evolution of a memristor.

  7. Multiplex Real-Time PCR Assay Targeting Eight Parasites Customized to the Korean Population: Potential Use for Detection in Diarrheal Stool Samples from Gastroenteritis Patients.

    Directory of Open Access Journals (Sweden)

    Eun Jeong Won

    Full Text Available Intestinal parasitic diseases occur worldwide and can cause diarrhea or gastroenteritis; however, their diagnosis is quite difficult, especially in low-endemism countries. We developed a multiplex real-time PCR assay for detection of eight intestinal parasites and prospectively evaluated it for patients with gastroenteritis. The assay targeted Cryptosporidium parvum, Giardia lamblia, Entamoeba histolytica, Blastocystis hominis, Dientamoeba fragilis, Clonorchis sinensis, Metagonimus yokogawai, and Gymnophalloides seoi. Performance characteristics were evaluated based on recovery after DNA extraction, analytical sensitivity, specificity, reproducibility, cross-reactivity, and interference characteristics. Clinical performance was validated against microscopy on 123 diarrheal samples. The assay demonstrated strong correlations between DNA concentrations and Ct values (R2, 0.9924-0.9998, and had a high PCR efficiency (83.3%-109.5%. Polymerase chain reactions detected as few as 10-30 copies of genomic DNA, and coefficient of variance was 0-7%. There was no cross-reactivity to the other 54 microorganisms tested. Interference occurred only in presence of high concentrations of erythrocytes or leukocytes. This assay had a higher correct identification rate (100.0% vs. 90.2% and lower incorrect ID rate (0.0% vs. 9.8% when compared to microscopy. Overall, this assay showed a higher sensitivity (100.0%; 95% confidence interval [CI] of 80.5-100.0 than microscopy (29.4%; 95% CI 10.31-55.96, and the specificity levels were comparable for both methods (100.0%; 95% CI 96.58-100.0. This newly developed multiplex real-time PCR assay offers a potential use for detecting intestinal parasitic pathogens customized to the Korean population.

  8. A novel multiplex real-time PCR assay for the concurrent detection of hepatitis A, B and C viruses in patients with acute hepatitis.

    Directory of Open Access Journals (Sweden)

    Yongjung Park

    Full Text Available A novel multiplex real-time PCR assay for concurrent detection of hepatitis viruses was evaluated for its clinical performance in screening patients with acute hepatitis. A total of 648 serum samples were collected from patients with acute symptoms of hepatitis. Concurrent detection of nucleic acids of HAV, HBV and HCV was performed using the Magicplex™ HepaTrio Real-time Detection test. Serum nucleic acid levels of HBV and HCV were also quantified by the Cobas® AmpliPrep/Cobas® TaqMan® (CAP/CTM HBV and HCV tests. Patients' medical records were also reviewed. Concordance rates between the results from the HepaTrio and the CAP/CTM tests for the detection of HBV and HCV were 94.9% (k = 0.88 and 99.2% (k = 0.98, respectively. The cycle threshold values with the HepaTrio test were also correlated well with the levels of HBV DNA (r = -0.9230 and HCV RNA (r = -0.8458. The sensitivity and specificity of the HepaTrio test were 93.8% and 98.2%, respectively, for detecting HBV infection, and 99.1% and 100.0%, respectively, for HCV infection. For the HepaTrio test, 21 (3.2% cases were positive for both HBV and HCV. Among the positive cases, 6 (0.9% were true coinfections. This test also detected 18 (2.8% HAV positives. The HepaTrio test demonstrated good clinical performance and produced results that agreed well with those of the CAP/CTM assays, especially for the detection of HCV. This assay was also able to detect HAV RNA from anti-HAV IgM-positive individuals. Therefore, this new multiplex PCR assay could be useful for the concurrent detection of the three hepatitis viruses.

  9. One-step multiplex real time RT-PCR for the detection of bovine respiratory syncytial virus, bovine herpesvirus 1 and bovine parainfluenza virus 3

    Directory of Open Access Journals (Sweden)

    Thonur Leenadevi

    2012-03-01

    Full Text Available Abstract Background Detection of respiratory viruses in veterinary species has traditionally relied on virus detection by isolation or immunofluorescence and/or detection of circulating antibody using ELISA or serum neutralising antibody tests. Multiplex real time PCR is increasingly used to diagnose respiratory viruses in humans and has proved to be superior to traditional methods. Bovine respiratory disease (BRD is one of the most common causes of morbidity and mortality in housed cattle and virus infections can play a major role. We describe here a one step multiplex reverse transcriptase quantitative polymerase chain reaction (mRT-qPCR to detect the viruses commonly implicated in BRD. Results A mRT-qPCR assay was developed and optimised for the simultaneous detection of bovine respiratory syncytial virus (BRSV, bovine herpes virus type 1 (BoHV-1 and bovine parainfluenza virus type 3 (BPI3 i & ii nucleic acids in clinical samples from cattle. The assay targets the highly conserved glycoprotein B gene of BoHV-1, nucleocapsid gene of BRSV and nucleoprotein gene of BPI3. This mRT-qPCR assay was assessed for sensitivity, specificity and repeatability using in vitro transcribed RNA and recent field isolates. For clinical validation, 541 samples from clinically affected animals were tested and mRT-qPCR result compared to those obtained by conventional testing using virus isolation (VI and/or indirect fluorescent antibody test (IFAT. Conclusions The mRT-qPCR assay was rapid, highly repeatable, specific and had a sensitivity of 97% in detecting 102 copies of BRSV, BoHV-1 and BPI3 i & ii. This is the first mRT-qPCR developed to detect the three primary viral agents of BRD and the first multiplex designed using locked nucleic acid (LNA, minor groove binding (MGB and TaqMan probes in one reaction mix. This test was more sensitive than both VI and IFAT and can replace the aforesaid methods for virus detection during outbreaks of BRD.

  10. Rapid genetic typing of diarrheagenic Escherichia coli using a two-tube modified molecular beacon based multiplex real-time PCR assay and its clinical application.

    Science.gov (United States)

    Chen, Qingliang; Shi, Xiaolu; Li, Yinghui; Jiang, Yixiang; Lin, Yiman; Qiu, Yaqun; Li, Qingge; Hu, Qinghua

    2014-07-15

    Diarrheagenic Escherichia coli (DEC), including Enterotoxigenic E.coli (ETEC), Enteroaggregative E.coli (EAEC), Enteropathogenic E.coli (EPEC), Enterohemolysin E.coli (EHEC) and Enteroinvasive E.coli (EIEC) causes diarrhea or hemolytic uremic syndromes among infants and travelers around the world. A rapid, reliable and repeatable method is urgent for identifying DEC so as to provide the reference for responding to diarrheal disease outbreak and the treatment of the diarrheal patients associated with DEC. In this study, specific primers and modified molecular beacon probes of nine specific virulence genes, whose 5'end were added with homo tail sequence, were designed; and a two-tube modified molecular beacon based multiplex real-time PCR (rtPCR) assay for the identification of five Escherichia coli pathotypes, including ETEC, EAEC, EPEC, EHEC and EIEC was developed and optimized. Totally 102 bacterial strains, including 52 reference bacterial strains and 50 clinical strains were detected to confirm whether the target genes selected were specific. Then detection limits of the assay were tested. Lastly, the assay was applied to the detection of 11860 clinical samples to evaluate the specificity and sensitivity of the developed assay compared with the conventional PCR. The target genes were 100% specific as assessed on 102 bacterial strains since no cross-reactions were observed. The detection limits ranged from 88 CFU/mL (EHEC) to 880 CFU/mL (EPEC). Compared with the conventional PCR, the specificity and sensitivity of the multiplex rtPCR was 100% and over 99%, respectively. The coefficient of variation (CV) for each target gene ranged from 0.45% to 1.53%. 171 positive clinical samples were mostly identified as ETEC (n = 111, 64.9%) and EPEC (n = 38, 22.2%), which were the dominating pathotypes of DEC strains. The developed multiplex rtPCR assay for the identification of DEC was high sensitive and specific and could be applied to the rapid identification of

  11. Nitrogen fertilization in irrigated common bean at different times, with and without dose division

    Directory of Open Access Journals (Sweden)

    Danilo Pereira Ramos

    2014-03-01

    Full Text Available This article aims to evaluate the effect of nitrogen fertilization at different times on the agronomic characteristics of common bean cultivars, within the intercrop period. An experiment was installed in the town of Gurupi, Tocantins, Brazil, with randomized blocks, under a 3 x 5 factorial scheme, consisting of 3 cultivars and 5 nitrogen application times, with 4 repetitions. We evaluated the cultivars IAC Alvorada, IPR Juriti, and BRS Requinte. Regarding nitrogen fertilization, we evaluated 5 times, the first corresponding to control (E1 = N zero and the others applying 100 kg.ha-1 of nitrogen, using urea as their source, as follows: E2 = 100% of N applied at sowing; E3 = 100% of N applied 25 days after emergence (DAE; E4 = 50% of N applied 20 DAE and 50% 30 DAE; E5 = 33% of N applied 15 DAE, 33% 25 DAE, and 33% 35 DAE. There was genetic variability among cultivars with regard to response, as well as differences between nitrogen fertilization times. The cultivars IAC Alvorada and IPR Juriti obtained higher grain yields. The nitrogen application time divided into 15, 25 and 35 DAE enabled a higher grain yield for the cultivars IAC Alvorada and IPR Juriti.

  12. Multiplex Recurrence Networks

    Science.gov (United States)

    Eroglu, Deniz; Marwan, Norbert

    2017-04-01

    The complex nature of a variety of phenomena in physical, biological, or earth sciences is driven by a large number of degrees of freedom which are strongly interconnected. Although the evolution of such systems is described by multivariate time series (MTS), so far research mostly focuses on analyzing these components one by one. Recurrence based analyses are powerful methods to understand the underlying dynamics of a dynamical system and have been used for many successful applications including examples from earth science, economics, or chemical reactions. The backbone of these techniques is creating the phase space of the system. However, increasing the dimension of a system requires increasing the length of the time series in order get significant and reliable results. This requirement is one of the challenges in many disciplines, in particular in palaeoclimate, thus, it is not easy to create a phase space from measured MTS due to the limited number of available obervations (samples). To overcome this problem, we suggest to create recurrence networks from each component of the system and combine them into a multiplex network structure, the multiplex recurrence network (MRN). We test the MRN by using prototypical mathematical models and demonstrate its use by studying high-dimensional palaeoclimate dynamics derived from pollen data from the Bear Lake (Utah, US). By using the MRN, we can distinguish typical climate transition events, e.g., such between Marine Isotope Stages.

  13. Multiplex Real-Time qPCR Assay for Simultaneous and Sensitive Detection of Phytoplasmas in Sesame Plants and Insect Vectors.

    Directory of Open Access Journals (Sweden)

    Cengiz Ikten

    Full Text Available Phyllody, a destructive and economically important disease worldwide caused by phytoplasma infections, is characterized by the abnormal development of floral structures into stunted leafy parts and contributes to serious losses in crop plants, including sesame (Sesamum indicum L.. Accurate identification, differentiation, and quantification of phyllody-causing phytoplasmas are essential for effective management of this plant disease and for selection of resistant sesame varieties. In this study, a diagnostic multiplex qPCR assay was developed using TaqMan® chemistry based on detection of the 16S ribosomal RNA gene of phytoplasmas and the 18S ribosomal gene of sesame. Phytoplasma and sesame specific primers and probes labeled with different fluorescent dyes were used for simultaneous amplification of 16SrII and 16SrIX phytoplasmas in a single tube. The multiplex real-time qPCR assay allowed accurate detection, differentiation, and quantification of 16SrII and 16SrIX groups in 109 sesame plant and 92 insect vector samples tested. The assay was found to have a detection sensitivity of 1.8 x 102 and 1.6 x 102 DNA copies for absolute quantification of 16SrII and 16SrIX group phytoplasmas, respectively. Relative quantification was effective and reliable for determination of phyllody phytoplasma DNA amounts normalized to sesame DNA in infected plant tissues. The development of this qPCR assay provides a method for the rapid measurement of infection loads to identify resistance levels of sesame genotypes against phyllody phytoplasma disease.

  14. Multiplex Real-Time qPCR Assay for Simultaneous and Sensitive Detection of Phytoplasmas in Sesame Plants and Insect Vectors.

    Science.gov (United States)

    Ikten, Cengiz; Ustun, Rustem; Catal, Mursel; Yol, Engin; Uzun, Bulent

    2016-01-01

    Phyllody, a destructive and economically important disease worldwide caused by phytoplasma infections, is characterized by the abnormal development of floral structures into stunted leafy parts and contributes to serious losses in crop plants, including sesame (Sesamum indicum L.). Accurate identification, differentiation, and quantification of phyllody-causing phytoplasmas are essential for effective management of this plant disease and for selection of resistant sesame varieties. In this study, a diagnostic multiplex qPCR assay was developed using TaqMan® chemistry based on detection of the 16S ribosomal RNA gene of phytoplasmas and the 18S ribosomal gene of sesame. Phytoplasma and sesame specific primers and probes labeled with different fluorescent dyes were used for simultaneous amplification of 16SrII and 16SrIX phytoplasmas in a single tube. The multiplex real-time qPCR assay allowed accurate detection, differentiation, and quantification of 16SrII and 16SrIX groups in 109 sesame plant and 92 insect vector samples tested. The assay was found to have a detection sensitivity of 1.8 x 102 and 1.6 x 102 DNA copies for absolute quantification of 16SrII and 16SrIX group phytoplasmas, respectively. Relative quantification was effective and reliable for determination of phyllody phytoplasma DNA amounts normalized to sesame DNA in infected plant tissues. The development of this qPCR assay provides a method for the rapid measurement of infection loads to identify resistance levels of sesame genotypes against phyllody phytoplasma disease.

  15. Multiplex Real-Time PCR for Detection of Staphylococcus aureus, mecA and Panton-Valentine Leukocidin (PVL) Genes from Selective Enrichments from Animals and Retail Meat

    Science.gov (United States)

    Velasco, Valeria; Sherwood, Julie S.; Rojas-García, Pedro P.; Logue, Catherine M.

    2014-01-01

    The aim of this study was to compare a real-time PCR assay, with a conventional culture/PCR method, to detect S. aureus, mecA and Panton-Valentine Leukocidin (PVL) genes in animals and retail meat, using a two-step selective enrichment protocol. A total of 234 samples were examined (77 animal nasal swabs, 112 retail raw meat, and 45 deli meat). The multiplex real-time PCR targeted the genes: nuc (identification of S. aureus), mecA (associated with methicillin resistance) and PVL (virulence factor), and the primary and secondary enrichment samples were assessed. The conventional culture/PCR method included the two-step selective enrichment, selective plating, biochemical testing, and multiplex PCR for confirmation. The conventional culture/PCR method recovered 95/234 positive S. aureus samples. Application of real-time PCR on samples following primary and secondary enrichment detected S. aureus in 111/234 and 120/234 samples respectively. For detection of S. aureus, the kappa statistic was 0.68–0.88 (from substantial to almost perfect agreement) and 0.29–0.77 (from fair to substantial agreement) for primary and secondary enrichments, using real-time PCR. For detection of mecA gene, the kappa statistic was 0–0.49 (from no agreement beyond that expected by chance to moderate agreement) for primary and secondary enrichment samples. Two pork samples were mecA gene positive by all methods. The real-time PCR assay detected the mecA gene in samples that were negative for S. aureus, but positive for Staphylococcus spp. The PVL gene was not detected in any sample by the conventional culture/PCR method or the real-time PCR assay. Among S. aureus isolated by conventional culture/PCR method, the sequence type ST398, and multi-drug resistant strains were found in animals and raw meat samples. The real-time PCR assay may be recommended as a rapid method for detection of S. aureus and the mecA gene, with further confirmation of methicillin-resistant S. aureus (MRSA) using

  16. Experimental demonstration of subcarrier multiplexed quantum key distribution system.

    Science.gov (United States)

    Mora, José; Ruiz-Alba, Antonio; Amaya, Waldimar; Martínez, Alfonso; García-Muñoz, Víctor; Calvo, David; Capmany, José

    2012-06-01

    We provide, to our knowledge, the first experimental demonstration of the feasibility of sending several parallel keys by exploiting the technique of subcarrier multiplexing (SCM) widely employed in microwave photonics. This approach brings several advantages such as high spectral efficiency compatible with the actual secure key rates, the sharing of the optical fainted pulse by all the quantum multiplexed channels reducing the system complexity, and the possibility of upgrading with wavelength division multiplexing in a two-tier scheme, to increase the number of parallel keys. Two independent quantum SCM channels featuring a sifted key rate of 10 Kb/s/channel over a link with quantum bit error rate <2% is reported.

  17. 100 GB/S Time Division Multiplex (TDM) Access Nodes and Regenerators Based on Novel Loop Mirrors with High Nonlinearity Fibers

    Science.gov (United States)

    2002-07-01

    T. Kanada and D. L. Franzen, “Single-mode fiber dispersion measurements using a mode- locked laser diode,” Opt. Lett. 11, 4-6 (1986). 17. H. Takara...pp. 1228-1236, May 1997. 3. T. Kanada , and D.L. Franzen, “Optical waveform measurement by optical sampling with a mode- locked laser diode,” Opt

  18. Clinical utility of an optimised multiplex real-time PCR assay for the identification of pathogens causing sepsis in Vietnamese patients

    Directory of Open Access Journals (Sweden)

    Ngo Tat Trung

    2018-02-01

    Conclusion: The combination of culture and the multiplex RT-PCR assay provided an excellent diagnostic accomplishment and significantly supported the identification of causative pathogens in clinical samples obtained from septic patients.

  19. Multiplexed entangled photon-pair sources for all-fiber quantum networks

    Science.gov (United States)

    Zhou, Zhi-Yuan; Li, Yin-Hai; Xu, Li-Xin; Shi, Bao-Sen; Guo, Guang-Can

    2016-11-01

    The ultimate goal of quantum information science is to build a global quantum network, which enables quantum resources to be distributed and shared between remote parties. Such a quantum network can be realized using only fiber elements, thus deriving the advantages of low transmission loss, low cost, scalability, and integrability through mature fiber communication techniques such as dense wavelength division multiplexing. Hence high-quality entangled-photon sources based on fibers are in high demand. Here we report multiplexed polarization- and time-bin-entangled photon-pair sources based on the dispersion-shifted fiber operating at room temperature. The associated high quality of entanglement is characterized using interference, Bell's inequality, and quantum state tomography. The simultaneous presence of both types of entanglement in multi-channel pairs of a 100-GHz dense wavelength division multiplexing device indicates a great capacity in distributing entangled photons over multiple users. Our design provides a versatile platform and takes a big step toward constructing an all-fiber quantum network.

  20. Time-division polynomial pre-distorter for linearisation of 1.5 T MRI power amplifier

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    Ming Hui

    2017-06-01

    Full Text Available A time-division polynomial (TDP model is proposed for modelling and linearising a 1.5 T magnetic resonance imaging (MRI power amplifier (PA with strong non-linearity in high input signal dynamic range. In order to demonstrate the merit of this non-linear model, a 64 dBm 1.5 T MRI PA (63.89 MHz and two different Sinc-pulse signals are used in modelling and linearisation measurements. The TDP is compared with the conventional non-memory polynomial (NMP and no digital pre-distortion for the 1.5 T MRI PA, which is driven by test signal with 2 ms time length and 2% duty cycle. The proposed TDP leads to up to 9 dB improvement in the normalised mean square error compared with the NMP in two different test signals. More importantly, TDP illustrates significantly better reduction in amplitude modulation/amplitude modulation (AM/AM and amplitude modulation/phase modulation (AM/PM conversion compared with the NMP.

  1. Multiplex real-time PCR assay for the detection of extended-spectrum β-lactamase and carbapenemase genes using melting curve analysis.

    Science.gov (United States)

    Singh, Prashant; Pfeifer, Yvonne; Mustapha, Azlin

    2016-05-01

    Real-time PCR melt curve assays for the detection of β-lactamase, extended-spectrum β-lactamase and carbapenemase genes in Gram-negative bacteria were developed. Two multiplex real-time PCR melt curve assays were developed for the detection of ten common β-lactamase genes: blaKPC-like, blaOXA-48-like, blaNDM-like, blaVIM-like, blaIMP-like, blaCTX-M-1+2-group, blaCMY-like, blaACC-like, blaSHV-like and blaTEM-like. The assays were evaluated using 25 bacterial strains and 31 DNA samples (total n=56) comprising different Enterobacteriaceae genera and Pseudomonas spp. These strains were previously characterized at five research institutes. Each resistance gene targeted in this study generated a non-overlapping and distinct melt curve peak. The assay worked effectively and detected the presence of additional resistance genes in 23 samples. The assays developed in this study offer a simple, low cost method for the detection of prevalent β-lactamase, ESBL and carbapenemase genes among Gram-negative pathogens. Copyright © 2016 Elsevier B.V. All rights reserved.

  2. Multiplex real-time RT-PCR assay for bovine viral diarrhea virus type 1, type 2 and HoBi-like pestivirus.

    Science.gov (United States)

    Mari, Viviana; Losurdo, Michele; Lucente, Maria Stella; Lorusso, Eleonora; Elia, Gabriella; Martella, Vito; Patruno, Giovanni; Buonavoglia, Domenico; Decaro, Nicola

    2016-03-01

    HoBi-like pestiviruses are emerging pestiviruses that infect cattle causing clinical forms overlapping to those induced by bovine viral diarrhea virus (BVDV) 1 and 2. As a consequence of their widespread distribution reported in recent years, molecular tools for rapid discrimination among pestiviruses infecting cattle are needed. The aim of the present study was to develop a multiplex real-time RT-PCR assay, based on the TaqMan technology, for the rapid and unambiguous characterisation of all bovine pestiviruses, including the emerging HoBi-like strains. The assay was found to be sensitive, specific and repeatable, ensuring detection of as few as 10(0)-10(1) viral RNA copies. No cross-reactions between different pestiviral species were observed even in samples artificially contaminated with more than one pestivirus. Analysis of field samples tested positive for BVDV-1, BVDV-2 or HoBi-like virus by a nested PCR protocol revealed that the developed TaqMan assay had equal or higher sensitivity and was able to discriminate correctly the viral species in all tested samples, whereas a real-time RT-PCR assay previously developed for HoBi-like pestivirus detection showed cross-reactivity with few high-titre BVDV-2 samples. Copyright © 2015 Elsevier B.V. All rights reserved.

  3. Regular- and postseason comparisons of playing time and measures of running performance in NCAA Division I women soccer players.

    Science.gov (United States)

    Wells, Adam J; Hoffman, Jay R; Beyer, Kyle S; Hoffman, Mattan W; Jajtner, Adam R; Fukuda, David H; Stout, Jeffrey R

    2015-09-01

    The management of playing time in National Collegiate Athletic Association (NCAA) soccer athletes may be a key factor affecting running performance during competition. This study compared playing time and running performance between regular-season and postseason competitions during a competitive women's soccer season. Nine NCAA Division I women soccer players (age, 21.3 ± 0.9 years; height, 170.3 ± 5.7 cm; body mass, 64.0 ± 5.8 kg) were tracked using portable GPS devices across 21 games during a competitive season (regular season (n = 17); postseason (n = 4)). Movements on the field were divided into operationally distinct thresholds defined as standing/transient motion, walking, jogging, low-speed running, moderate-speed running, high-speed running, sprinting, low-intensity running, and high-intensity running. A significant increase in minutes played (+17%, p = 0.010) was observed at postseason compared with the regular season. Concomitant increases in time spent engaged in low-intensity running (LIR: +18%, p = 0.011), standing/transient motion (+35%, p = 0.004), walking (+17%, p = 0.022), distance covered while walking (+14%, p = 0.036), and at low intensity (+11%, p = 0.048) were observed. Performance comparisons between the first and second half within games revealed a significant decrease (p ≤ 0.05) in high-speed and high-intensity runs during the second half of the postseason compared with the regular season. Changes in minutes played correlated significantly with changes in absolute time spent engaged in LIR (r = 0.999, p women's soccer.

  4. Design of a reconfigurable optical add/drop multiplexer based on tunable Fabry-Perot array

    Science.gov (United States)

    Ye, Jiansen; Wang, Xin; Li, Zhuo; Yang, Yang; Xu, Rui; Shi, Rui

    2015-08-01

    With the development of optical fiber communication, dense wavelength division multiplexing (DWDM) system is important for the rapid management of multi-wavelength in the core node of the optical transmission network. In this paper, a reconfigurable optical add-drop multiplexer (ROADM) based on the tunable Fabry-Perot (F-P) array is proposed. An optical switch with high isolation and low crosstalk is designed by using the characteristics of filtering and tuning for the F-P array. The principle, structure, and function of the tunable F-P array are introduced. The characteristics of filtering and tuning for the F-P filter are also calculated, and the factor for the isolation, crosstalk, response time and insertion loss are analyzed. A single physical channel ROADM with 16 signal channels, which operates in C-band, is designed and optimized by simulation.

  5. Cascaded multiplexed optical link on a telecommunication network for frequency dissemination.

    Science.gov (United States)

    Lopez, Olivier; Haboucha, Adil; Kéfélian, Fabien; Jiang, Haifeng; Chanteau, Bruno; Roncin, Vincent; Chardonnet, Christian; Amy-Klein, Anne; Santarelli, Giorgio

    2010-08-02

    We demonstrate a cascaded optical link for ultrastable frequency dissemination comprised of two compensated links of 150 km and a repeater station. Each link includes 114 km of Internet fiber simultaneously carrying data traffic through a dense wavelength division multiplexing technology, and passes through two routing centers of the telecommunication network. The optical reference signal is inserted in and extracted from the communication network using bidirectional optical add-drop multiplexers. The repeater station operates autonomously ensuring noise compensation on the two links and the ultra-stable signal optical regeneration. The compensated link shows a fractional frequency instability of 3 x 10(-15) at one second measurement time and 5 x 10(-20) at 20 hours. This work paves the way to a wide dissemination of ultra-stable optical clock signals between distant laboratories via the Internet network.

  6. Multiplex real-time quantitative PCR, microscopy and rapid diagnostic immuno-chromatographic tests for the detection of Plasmodium spp: performance, limit of detection analysis and quality assurance.

    Science.gov (United States)

    Khairnar, Krishna; Martin, Donald; Lau, Rachel; Ralevski, Filip; Pillai, Dylan R

    2009-12-09

    Accurate laboratory diagnosis of malaria species in returning travelers is paramount in the treatment of this potentially fatal infectious disease. A total of 466 blood specimens from returning travelers to Africa, Asia, and South/Central America with suspected malaria infection were collected between 2007 and 2009 at the reference public health laboratory. These specimens were assessed by reference microscopy, multipex real-time quantitative polymerase chain reaction (QPCR), and two rapid diagnostic immuno-chromatographic tests (ICT) in a blinded manner. Key clinical laboratory parameters such as limit of detection (LOD) analysis on clinical specimens by parasite stage, inter-reader variability of ICTs, staffing implications, quality assurance and cost analysis were evaluated. QPCR is the most analytically sensitive method (sensitivity 99.41%), followed by CARESTART (sensitivity 88.24%), and BINAXNOW (sensitivity 86.47%) for the diagnosis of malaria in returning travelers when compared to reference microscopy. However, microscopy was unable to specifically identify Plasmodia spp. in 18 out of 170 positive samples by QPCR. Moreover, the 17 samples that were negative by microscopy and positive by QPCR were also positive by ICTs. Quality assurance was achieved for QPCR by exchanging a blinded proficiency panel with another reference laboratory. The Kappa value of inter-reader variability among three readers for BINAXNOW and CARESTART was calculated to be 0.872 and 0.898 respectively. Serial dilution studies demonstrated that the QPCR cycle threshold correlates linearly with parasitemia (R(2) = 0.9746) in a clinically relevant dynamic range and retains a LOD of 11 rDNA copies/microl for P. falciparum, which was several log lower than reference microscopy and ICTs. LOD for QPCR is affected not only by parasitemia but the parasite stage distribution of each clinical specimen. QPCR was approximately 6-fold more costly than reference microscopy. These data suggest that

  7. Multiplex real-time quantitative PCR, microscopy and rapid diagnostic immuno-chromatographic tests for the detection of Plasmodium spp: performance, limit of detection analysis and quality assurance

    Directory of Open Access Journals (Sweden)

    Ralevski Filip

    2009-12-01

    Full Text Available Abstract Background Accurate laboratory diagnosis of malaria species in returning travelers is paramount in the treatment of this potentially fatal infectious disease. Materials and methods A total of 466 blood specimens from returning travelers to Africa, Asia, and South/Central America with suspected malaria infection were collected between 2007 and 2009 at the reference public health laboratory. These specimens were assessed by reference microscopy, multipex real-time quantitative polymerase chain reaction (QPCR, and two rapid diagnostic immuno-chromatographic tests (ICT in a blinded manner. Key clinical laboratory parameters such as limit of detection (LOD analysis on clinical specimens by parasite stage, inter-reader variability of ICTs, staffing implications, quality assurance and cost analysis were evaluated. Results QPCR is the most analytically sensitive method (sensitivity 99.41%, followed by CARESTART (sensitivity 88.24%, and BINAXNOW (sensitivity 86.47% for the diagnosis of malaria in returning travelers when compared to reference microscopy. However, microscopy was unable to specifically identify Plasmodia spp. in 18 out of 170 positive samples by QPCR. Moreover, the 17 samples that were negative by microscopy and positive by QPCR were also positive by ICTs. Quality assurance was achieved for QPCR by exchanging a blinded proficiency panel with another reference laboratory. The Kappa value of inter-reader variability among three readers for BINAXNOW and CARESTART was calculated to be 0.872 and 0.898 respectively. Serial dilution studies demonstrated that the QPCR cycle threshold correlates linearly with parasitemia (R2 = 0.9746 in a clinically relevant dynamic range and retains a LOD of 11 rDNA copies/μl for P. falciparum, which was several log lower than reference microscopy and ICTs. LOD for QPCR is affected not only by parasitemia but the parasite stage distribution of each clinical specimen. QPCR was approximately 6-fold more

  8. A Unified Framework of the Performance Evaluation of Optical Time-Wavelength Code-Division Multiple-Access Systems

    Science.gov (United States)

    Inaty, Elie

    In this paper, we provide an analysis to the performance of optical time-wavelength code-division multiple-access (OTW-CDMA) network when the system is working above the nominal transmission rate limit imposed by the passive encoding-decoding operation. We address the problem of overlapping in such a system and how it can directly affect the bit error rate (BER). A unified mathematical framework is presented under the assumption of one coincidence sequences with non-repeating wavelengths. A closed form expression of the multiple access interference limited BER is provided as a function of different system parameters. Results show that the performance of OTW-CDMA system may be critically affected when working above the nominal limit; an event that may happen when the network operates at high transmission rate. In addition, the impact of the derived error probability on the performance of two newly proposed MAC protocols, the S-ALOHA and the R3T, is also investigated. It is shown that for low transmission rates, the S-ALOHA is better than the R3T; while the R3T is better at very high transmission rates. However, in general it is postulated that the R3T protocol suffers a higher delay mainly because of the presence of additional modes.

  9. Determination of the foraging behaviour and blood meal source of malaria vector mosquitoes in Trincomalee District of Sri Lanka using a multiplex real time polymerase chain reaction assay.

    Science.gov (United States)

    Gunathilaka, Nayana; Denipitiya, Thanuja; Hapugoda, Menaka; Abeyewickreme, Wimaladharma; Wickremasinghe, Rajitha

    2016-04-26

    Studies of host preference patterns in blood-feeding anopheline mosquitoes are crucial to incriminating malaria vectors. However, little information is available on host preferences of Anopheles mosquitoes in Sri Lanka. Adult Anopheles mosquitoes were collected from five selected sentinel sites in Trincomalee District during June-September 2011. Each blood-fed mosquito was processed on filter papers. DNA was extracted using the dried blood meal protocol of the QIAmp DNA mini kit. A multiplexed, real-time PCR assay targeting eight animals was developed for two panels to identify the host meal of Anopheles. Human blood index (HBI), forage ratio (FR) and host feeding index (HFI) were calculated. A total of 280 field-caught, freshly engorged female mosquitoes belonging to 12 anopheline species were analysed. The overall HBI and HFI in the present study were low indicating that humans were not the preferred host for the tested anopheline species. Nevertheless, a small proportion engorged Anopheles aconitus, Anopheles culicifacies, Anopheles barbirostris, Anopheles annularis, Anopheles subpictus, Anopheles peditaeniatus, Anopheles pseudojamesi, and Anopheles barbumbrosus contained human blood. The presence of human blood in mosquito species indicates the possibility of them transmitting malaria. Further studies on vector competence are needed to determine the role of each of the above anopheline species as efficient vectors of malaria.

  10. A Rapid Multiplex Real-Time PCR High-Resolution Melt Curve Assay for the Simultaneous Detection of Bacillus cereus, Listeria monocytogenes, and Staphylococcus aureus in Food.

    Science.gov (United States)

    Forghani, Fereidoun; Wei, Shuai; Oh, Deog-Hwan

    2016-05-01

    Three important foodborne pathogens, Bacillus cereus, Listeria monocytogenes, and Staphylococcus aureus, are of great concern for food safety. They may also coexist in food matrices and, in the case of B. cereus and S. aureus, the resulting illnesses can resemble each other owing to similar symptoms. Therefore, their simultaneous detection may have advantages in terms of cost savings and rapidity. Given this context, a rapid multiplex real-time PCR high-resolution melt curve assay for the simultaneous detection of these three pathogens in food was developed. The assay successfully detected B. cereus (gyrB), L. monocytogenes (hly), and S. aureus (nuc) in a single reaction, and the average melting temperatures were 76.23, 80.19, and 74.01°C, respectively. The application of SYTO9 dye and a slow melt curve analysis ramp rate (0.1°C/s) enabled the production of sharp, high-resolution melt curve peaks that were easily distinguishable from each other. The detection limit in food (milk, rice, and lettuce) was 3.7 × 10(3) CFU/g without an enrichment step and 3.7 × 10(1) CFU/g following the 10-h enrichment. Hence, the assay developed here is specific and sensitive, providing an efficient tool for implementation in food for the simultaneous detection of B. cereus, L. monocytogenes, and S. aureus .

  11. Prevalence of Dientamoeba fragilis, Giardia duodenalis, Entamoeba histolytica/dispar, and Cryptosporidium spp in Da Nang, Vietnam, detected by a multiplex real-time PCR.

    Science.gov (United States)

    Ögren, Jessica; Van Nguyen, Song; Nguyen, Minh Khac; Dimberg, Jan; Matussek, Andreas

    2016-06-01

    We surveyed the prevalence of Dientamoeba fragilis, Giardia duodenalis, Entamoeba histolytica, Entamoeba dispar, and Cryptosporidium spp in individuals with and without gastrointestinal (GI) symptoms residing in and around Da Nang city, Vietnam. Fecal samples were collected from children (n = 100) and adults (n = 80) with GI symptoms and from healthy individuals (n = 88) reporting no GI symptoms. Parasite detection was performed by multiplex real-time PCR. Overall, except for G. duodenalis, we found a low prevalence (<5%) of D. fragilis and E. dispar and no detection of E. histolytica and C. spp in all participants with GI symptoms. Specifically for D. fragilis this contrasts with findings in European populations of children with GI symptoms showing prevalence up to 73%. Moreover, our results indicate that the prevalence of G. duodenalis is higher in patients with GI symptoms compared to asymptomatic individuals and this difference is most obvious in young patients. © 2016 The Authors. APMIS published by John Wiley & Sons Ltd on behalf of Scandinavian Societies for Medical Microbiology and Pathology.

  12. Universal detection of phytoplasmas and Xylella spp. by TaqMan singleplex and multiplex real-time PCR with dual priming oligonucleotides.

    Directory of Open Access Journals (Sweden)

    Takao Ito

    Full Text Available Phytoplasmas and Xylella spp. are bacteria that cause many economically important plant diseases worldwide. TaqMan probe-based quantitative real-time polymerase chain reaction (qPCR assays have been utilized to universally detect phytoplasmas or Xylella fastidiosa. To develop a superior universal qPCR method, we used a dual priming oligonucleotide (DPO with two annealing sites as a reverse primer to target the well-conserved bacterial 16S rDNA. The new qPCR assays universally detected various species of phytoplasmas and subspecies of X. fastidiosa as well as Xylella taiwanensis, and generally showed superior threshold cycle values when amplifying specific or non-specific products compared to current universal qPCR assays. The proposed qPCR assays were integrated to develop a multiplex qPCR assay that simultaneously detected phytoplasmas, Xylella spp., and an internal plant DNA positive control within 1 hour. This assay could detect a minimum of ten bacterial cells and was compatible with crude extractions used in the rapid screening of various plants. The amplicons were of sufficient lengths to be directly sequenced for preliminary identification, and the primers could be used in universal conventional PCR assays. Additionally, reverse DPO primers can be utilized to improve other probe-based qPCR assays.

  13. A multiplex, internally controlled real-time PCR assay for detection of toxigenic Clostridium difficile and identification of hypervirulent strain 027/ST-1

    DEFF Research Database (Denmark)

    Hoegh, A M; Nielsen, J B; Lester, A

    2012-01-01

    The purpose of this study was to validate a multiplex real-time PCR assay capable of detecting toxigenic Clostridium difficile and simultaneously identifying C. difficile ribotype 027/ST-1 by targeting the toxin genes tcdA, tcdB and cdtA in one reaction and in a separate reaction identifying the Δ...... to confirm the correct identification of the Δ117 deletion in tcdC and C. difficile ribotype 027/ST-1, respectively. The PCR assay displayed a sensitivity, specificity, PPV and NPV of 99.0%, 97.4%, 87.4% and 99.8%, respectively, compared to toxigenic culture on 665 samples evaluable both by PCR and culture....... Sequencing of tcdC, ribotyping and MLST of cultured isolates validated the genotyping assay and confirmed the ability of the assay to correctly identify C. difficile ribotype 027/ST-1 in our current epidemiological setting. We describe the use of a combination of two separate PCR assays for sensitive...

  14. Spectral compression of a DWDM grid using optical time-lenses

    DEFF Research Database (Denmark)

    Palushani, Evarist; Mulvad, Hans Christian Hansen; Galili, Michael

    2013-01-01

    We experimentally demonstrate the compression of a dense wavelength-division multiplexing (DWDM) grid via a spectral imaging system based on two time-lenses. A 100-GHz DWDM-grid is compressed to 50-GHz with error-free performance for all channels.......We experimentally demonstrate the compression of a dense wavelength-division multiplexing (DWDM) grid via a spectral imaging system based on two time-lenses. A 100-GHz DWDM-grid is compressed to 50-GHz with error-free performance for all channels....

  15. Detection of Campylobacter species and Arcobacter butzleri in stool samples by use of real-time multiplex PCR

    NARCIS (Netherlands)

    R.F. de Boer (Richard); A. Ott (Alewijn); P. Güren (Pinar); E. van Zanten; A.F. van Belkum (Alex); A.M.D. Kooistra-Smid

    2013-01-01

    textabstractThe presence of Campylobacter (or Campylobacter-like) species in stools from patients suspected of infectious gastroenteritis (n = 493) was investigated using real-time PCR for detection of Arcobacter butzleri (hsp60 gene), Campylobacter coli (ceuE gene), Campylobacter jejuni (mapA),

  16. Computational Fair Division

    DEFF Research Database (Denmark)

    Branzei, Simina

    Fair division is a fundamental problem in economic theory and one of the oldest questions faced through the history of human society. The high level scenario is that of several participants having to divide a collection of resources such that everyone is satisfied with their allocation -- e.g. two...... heirs dividing a car, house, and piece of land inherited. The literature on fair division was developed in the 20th century in mathematics and economics, but computational work on fair division is still sparse. This thesis can be seen as an excursion in computational fair division divided in two parts....... The first part tackles the cake cutting problem, where the cake is a metaphor for a heterogeneous divisible resource such as land, time, mineral deposits, and computer memory. We study the equilibria of classical protocols and design an algorithmic framework for reasoning about their game theoretic...

  17. Rapid identification of ST131 Escherichia coli by a novel multiplex real-time allelic discrimination assay.

    Science.gov (United States)

    François, Patrice; Bonetti, Eve-Julie; Fankhauser, Carolina; Baud, Damien; Cherkaoui, Abdessalam; Schrenzel, Jacques; Harbarth, Stephan

    2017-09-01

    Escherichia coli sequence type 131 is increasingly described in severe hospital infections. We developed a rapid real-time allelic discrimination assay for the rapid identification of E. coli ST131 isolates. This rapid assay represents an affordable alternative to sequence-based strategies before completing characterization of potentially highly virulent isolates of E. coli. Copyright © 2017 Elsevier B.V. All rights reserved.

  18. Rapid spectro-polarimetry to probe molecular symmetry in multiplex coherent anti-Stokes Raman scattering.

    Science.gov (United States)

    Würthwein, Thomas; Brinkmann, Maximilian; Hellwig, Tim; Fallnich, Carsten

    2017-11-21

    We present the simultaneous detection of the spectrum and the complete polarization state of a multiplex coherent anti-Stokes Raman scattering signal with a fast division-of-amplitude spectro-polarimeter. The spectro-polarimeter is based on a commercial imaging spectrograph, a birefringent wedge prism, and a segmented polarizer. Compared to the standard rotating-retarder fixed-analyzer spectro-polarimeter, only a single measurement is required and an up to 21-fold reduced acquisition time is shown. The measured Stokes parameters allow us to differentiate between vibrational symmetries and to determine the depolarization ratio ρ by data post-processing.

  19. The Cadre Division

    Science.gov (United States)

    1992-05-20

    NAME OF MONITORING ORGANIZATION U.S. Army War College (if & pika ble) Carlisle Barracks I 6c. ADDRESS (City, State, and ZIP Code) 7b. ADDRESS (City...divisions in the shortest possible time with the smallest feasible cost to the American taxpayer. This concept puts a cadre of active and reserve soldiers in...fighting divisions in the shortest possible time with the smallest feasible cost to the American taxpayer. This concept puts a cadre of active and

  20. Development of a multiplexing fingerprint and high wavenumber Raman spectroscopy technique for real-time in vivo tissue Raman measurements at endoscopy

    Science.gov (United States)

    Bergholt, Mads Sylvest; Zheng, Wei; Huang, Zhiwei

    2013-03-01

    We report on the development of a novel multiplexing Raman spectroscopy technique using a single laser light together with a volume phase holographic (VPH) grating that simultaneously acquires both fingerprint (FP) and high wavenumber (HW) tissue Raman spectra at endoscopy. We utilize a customized VPH dual-transmission grating, which disperses the incident Raman scattered light vertically onto two separate segments (i.e., -150 to 1950 cm-1 1750 to 3600 cm-1) of a charge-coupled device camera. We demonstrate that the multiplexing Raman technique can acquire high quality in vivo tissue Raman spectra ranging from 800 to 3600 cm-1 within 1.0 s with a spectral resolution of 3 to 6 cm-1 during clinical endoscopy. The rapid multiplexing Raman spectroscopy technique covering both FP and HW ranges developed in this work has potential for improving in vivo tissue diagnosis and characterization at endoscopy.

  1. Development of a multiplexing fingerprint and high wavenumber Raman spectroscopy technique for real-time in vivo tissue Raman measurements at endoscopy.

    Science.gov (United States)

    Bergholt, Mads Sylvest; Zheng, Wei; Huang, Zhiwei

    2013-03-01

    We report on the development of a novel multiplexing Raman spectroscopy technique using a single laser light together with a volume phase holographic (VPH) grating that simultaneously acquires both fingerprint (FP) and high wavenumber (HW) tissue Raman spectra at endoscopy. We utilize a customized VPH dual-transmission grating, which disperses the incident Raman scattered light vertically onto two separate segments (i.e., -150 to 1950  cm⁻¹; 1750 to 3600  cm⁻¹) of a charge-coupled device camera. We demonstrate that the multiplexing Raman technique can acquire high quality in vivo tissue Raman spectra ranging from 800 to 3600  cm⁻¹ within 1.0 s with a spectral resolution of 3 to 6  cm⁻¹ during clinical endoscopy. The rapid multiplexing Raman spectroscopy technique covering both FP and HW ranges developed in this work has potential for improving in vivo tissue diagnosis and characterization at endoscopy.

  2. DEVELOPMENT OF REAL-TIME MULTIPLEX PCR FOR THE QUANTITATIVE DETERMINATION OF TREC'S AND KREC'S IN WHOLE BLOOD AND IN DRIED BLOOD SPOTS

    Directory of Open Access Journals (Sweden)

    M. A. Gordukova

    2015-01-01

    Full Text Available Primary immunodeficiencies (PID such as severe combined immunodeficiency (SCID and X-linked agammaglobulinemia are characterized by the lack of functional Tand B-cells, respectively. Without early diagnosis and prompt treatment children with PID suffer from severe infectious diseases, leading to their death or disability. Our purpose was developing of simple, inexpensive, high throughput technique based on the quantitative determination of TREC and KREC molecules by real-time PCR, and its validation in a group of children with a verified diagnosis of SCID and X-linked agammaglobulinemia.In this study, we developed and validated multiplex real-time PCR for the TREC’s and KREC’s quantitative analysis. We have shown that linear range of Ct changes depending on the concentrations of targets with a correlation coefficient R2 not worse than 0.98 was observed at concentrations from 109 to 5 × 104 copies per ml. The lowest amount of targets reliably detected in a reaction volume was 10 TREC’s copies, 5 KREC ‘s copies and 5 copies of internal control (IL17RA. We determined the age-depended reference values of TRECs and KRECs in whole blood in 29 boys and 27 girls with normal immunological parameters. The normal cut-offs for TRECs and KRECs were defined in dry blood spots depending on the method of extraction.The proposed method showed 100% diagnostic sensitivity and specificity in the studied group. The method can be proposed as a screening tool for the diagnosis of SCID and X-linked agammaglobulinemia both in whole blood and in the dry blood spots. The further investigation is required with larger number of samples. 

  3. Analytical performance of a multiplex Real-Time PCR assay using TaqMan probes for quantification of Trypanosoma cruzi satellite DNA in blood samples.

    Directory of Open Access Journals (Sweden)

    Tomas Duffy

    Full Text Available BACKGROUND: The analytical validation of sensitive, accurate and standardized Real-Time PCR methods for Trypanosoma cruzi quantification is crucial to provide a reliable laboratory tool for diagnosis of recent infections as well as for monitoring treatment efficacy. METHODS/PRINCIPAL FINDINGS: We have standardized and validated a multiplex Real-Time quantitative PCR assay (qPCR based on TaqMan technology, aiming to quantify T. cruzi satellite DNA as well as an internal amplification control (IAC in a single-tube reaction. IAC amplification allows rule out false negative PCR results due to inhibitory substances or loss of DNA during sample processing. The assay has a limit of detection (LOD of 0.70 parasite equivalents/mL and a limit of quantification (LOQ of 1.53 parasite equivalents/mL starting from non-boiled Guanidine EDTA blood spiked with T. cruzi CL-Brener stock. The method was evaluated with blood samples collected from Chagas disease patients experiencing different clinical stages and epidemiological scenarios: 1- Sixteen Venezuelan patients from an outbreak of oral transmission, 2- Sixty three Bolivian patients suffering chronic Chagas disease, 3- Thirty four Argentinean cases with chronic Chagas disease, 4- Twenty seven newborns to seropositive mothers, 5- A seronegative receptor who got infected after transplantation with a cadaveric kidney explanted from an infected subject. CONCLUSIONS/SIGNIFICANCE: The performing parameters of this assay encourage its application to early assessment of T. cruzi infection in cases in which serological methods are not informative, such as recent infections by oral contamination or congenital transmission or after transplantation with organs from seropositive donors, as well as for monitoring Chagas disease patients under etiological treatment.

  4. Evaluation of a multiplex real-time polymerase chain reaction for the quantification of Escherichia coli O157 in cattle feces.

    Science.gov (United States)

    Jacob, Megan E; Shi, Xiaorong; An, Baoyan; Nagaraja, Tiruvoor G; Bai, Jianfa

    2012-01-01

    Cattle are asymptomatic reservoirs for Escherichia coli O157, a major foodborne pathogen. The organism generally colonizes the hindgut of cattle and is shed in the feces at low concentrations. The objective of this research was to evaluate a multiplex, real-time polymerase chain reaction (mqPCR) assay for quantification of E. coli O157 in cattle feces using stx1, stx2, and rfbE gene targets. Primer efficiency and analytical sensitivity of the assay were evaluated with a single or pooled (five strain) culture of E. coli O157. In pure culture, the minimum detection limit of the assay was 1.4×10(3) CFU/mL and 3.6×10(3) CFU/mL for the single and five-strain mixture of E. coli O157, respectively. Diagnostic sensitivity was analyzed using DNA extracted from cattle feces spiked with E. coli O157. In feces spiked with the pooled mixture of five E. coli O157 strains, the minimum detection limit was 3.6×10(4) CFU/g. We also evaluated the assay with feces from cattle experimentally inoculated with E. coli O157 by comparing the results to a culture-based method. For the majority of samples tested, the concentration of E. coli O157 detected by the real-time and culture methods was within one log difference. However, the assay could only be evaluated for cattle shedding high concentrations of E. coli O157. In conclusion, the mqPCR quantifying E. coli O157 in cattle feces using stx1, stx2, and rfbE gene targets may have use in detecting and quantifying super shedders, but is not applicable for quantification in animals shedding low concentrations (10(2) to 10(3) CFU/g feces).

  5. Towards a pathogenic Escherichia coli detection platform using multiplex SYBR®Green Real-time PCR methods and high resolution melting analysis.

    Directory of Open Access Journals (Sweden)

    Dafni-Maria Kagkli

    Full Text Available Escherichia coli is a group of bacteria which has raised a lot of safety concerns in recent years. Five major intestinal pathogenic groups have been recognized amongst which the verocytotoxin or shiga-toxin (stx1 and/or stx2 producing E. coli (VTEC or STEC respectively have received a lot of attention recently. Indeed, due to the high number of outbreaks related to VTEC strains, the European Food Safety Authority (EFSA has requested the monitoring of the "top-five" serogroups (O26, O103, O111, O145 and O157 most often encountered in food borne diseases and addressed the need for validated VTEC detection methods. Here we report the development of a set of intercalating dye Real-time PCR methods capable of rapidly detecting the presence of the toxin genes together with intimin (eae in the case of VTEC, or aggregative protein (aggR, in the case of the O104:H4 strain responsible for the outbreak in Germany in 2011. All reactions were optimized to perform at the same annealing temperature permitting the multiplex application in order to minimize the need of material and to allow for high-throughput analysis. In addition, High Resolution Melting (HRM analysis allowing the discrimination among strains possessing similar virulence traits was established. The development, application to food samples and the flexibility in use of the methods are thoroughly discussed. Together, these Real-time PCR methods facilitate the detection of VTEC in a new highly efficient way and could represent the basis for developing a simple pathogenic E. coli platform.

  6. A modified molecular beacons-based multiplex real-time PCR assay for simultaneous detection of eight foodborne pathogens in a single reaction and its application.

    Science.gov (United States)

    Hu, Qinghua; Lyu, Dongyue; Shi, Xiaolu; Jiang, Yixiang; Lin, Yiman; Li, Yinghui; Qiu, Yaqun; He, Lianhua; Zhang, Ran; Li, Qingge

    2014-03-01

    Foodborne disease outbreaks are often caused by one of the major pathogens. Early identification of the causal pathogen is crucial for disease control and prevention. We describe a real-time polymerase chain reaction (rtPCR) assay that can identify, in a single reaction, up to eight common foodborne bacterial pathogens, including Salmonella enterica subsp. enterica, Listeria monocytogenes, Escherichia coli O157, Vibrio parahaemolyticus, V. vulnificus, Campylobacter jejuni, Enterobacter sakazakii, and Shigella spp. This multiplex rtPCR assay takes advantage of modified molecular beacons and the multicolor combinational probe coding strategy to discriminate each pathogen and the homo-tag assisted non-dimer (HAND) system to prevent dimer formation. The detection limits of the assay ranged from 1.3×10(3) colony-forming units (CFU)/g stool (L. monocytogenes) to 1.6×10(4) CFU/g stool (Shigella spp.). The target genes were 100% specific as assessed on 986 reference strains covering 41 species since no cross-reactions were observed. The assay was applied to the detection of foodborne pathogens in 11,167 clinical samples and the results were compared with culture methods for further validation. The sensitivity and specificity of the rtPCR were 100% and 99%, respectively. When performed in a 96-well rtPCR system, more than 90 samples could be analyzed within 3 h. Given the high accuracy, sensitivity, specificity, and short turn-around time, the established assay could be used for the rapid and reliable identification of the causative pathogens responsible for a certain foodborne disease outbreak and rapid screening of these major foodborne pathogens in laboratory-based surveillance of outpatient clinical samples or even food samples.

  7. Multiplexity and multireciprocity in directed multiplexes

    Science.gov (United States)

    Gemmetto, Valerio; Squartini, Tiziano; Picciolo, Francesco; Ruzzenenti, Franco; Garlaschelli, Diego

    2016-10-01

    Real-world multilayer networks feature nontrivial dependencies among links of different layers. Here we argue that if links are directed, then dependencies are twofold. Besides the ordinary tendency of links of different layers to align as the result of "multiplexity," there is also a tendency to antialign as a result of what we call "multireciprocity," i.e., the fact that links in one layer can be reciprocated by opposite links in a different layer. Multireciprocity generalizes the scalar definition of single-layer reciprocity to that of a square matrix involving all pairs of layers. We introduce multiplexity and multireciprocity matrices for both binary and weighted multiplexes and validate their statistical significance against maximum-entropy null models that filter out the effects of node heterogeneity. We then perform a detailed empirical analysis of the world trade multiplex (WTM), representing the import-export relationships between world countries in different commodities. We show that the WTM exhibits strong multiplexity and multireciprocity, an effect which is, however, largely encoded into the degree or strength sequences of individual layers. The residual effects are still significant and allow us to classify pairs of commodities according to their tendency to be traded together in the same direction and/or in opposite ones. We also find that the multireciprocity of the WTM is significantly lower than the usual reciprocity measured on the aggregate network. Moreover, layers with low (high) internal reciprocity are embedded within sets of layers with comparably low (high) mutual multireciprocity. This suggests that, in the WTM, reciprocity is inherent to groups of related commodities rather than to individual commodities. We discuss the implications for international trade research focusing on product taxonomies, the product space, and fitness and complexity metrics.

  8. High Time-Resolution 640-Gb/s Clock Recovery Using Time-Domain Optical Fourier Transformation and Narrowband Optical Filter

    DEFF Research Database (Denmark)

    Guan, P.; Mulvad, Hans Christian Hansen; Kasai, K.

    2010-01-01

    We present a novel scheme for subharmonic clock recovery from an optical time-division-multiplexing signal using time-domain optical Fourier transformation and a narrowband optical filter. High-resolution 640-Gb/s clock recovery is successfully demonstrated with no pattern dependence. The clock...

  9. Multiplex PageRank.

    Directory of Open Access Journals (Sweden)

    Arda Halu

    Full Text Available Many complex systems can be described as multiplex networks in which the same nodes can interact with one another in different layers, thus forming a set of interacting and co-evolving networks. Examples of such multiplex systems are social networks where people are involved in different types of relationships and interact through various forms of communication media. The ranking of nodes in multiplex networks is one of the most pressing and challenging tasks that research on complex networks is currently facing. When pairs of nodes can be connected through multiple links and in multiple layers, the ranking of nodes should necessarily reflect the importance of nodes in one layer as well as their importance in other interdependent layers. In this paper, we draw on the idea of biased random walks to define the Multiplex PageRank centrality measure in which the effects of the interplay between networks on the centrality of nodes are directly taken into account. In particular, depending on the intensity of the interaction between layers, we define the Additive, Multiplicative, Combined, and Neutral versions of Multiplex PageRank, and show how each version reflects the extent to which the importance of a node in one layer affects the importance the node can gain in another layer. We discuss these measures and apply them to an online multiplex social network. Findings indicate that taking the multiplex nature of the network into account helps uncover the emergence of rankings of nodes that differ from the rankings obtained from one single layer. Results provide support in favor of the salience of multiplex centrality measures, like Multiplex PageRank, for assessing the prominence of nodes embedded in multiple interacting networks, and for shedding a new light on structural properties that would otherwise remain undetected if each of the interacting networks were analyzed in isolation.

  10. Multiplex PageRank.

    Science.gov (United States)

    Halu, Arda; Mondragón, Raúl J; Panzarasa, Pietro; Bianconi, Ginestra

    2013-01-01

    Many complex systems can be described as multiplex networks in which the same nodes can interact with one another in different layers, thus forming a set of interacting and co-evolving networks. Examples of such multiplex systems are social networks where people are involved in different types of relationships and interact through various forms of communication media. The ranking of nodes in multiplex networks is one of the most pressing and challenging tasks that research on complex networks is currently facing. When pairs of nodes can be connected through multiple links and in multiple layers, the ranking of nodes should necessarily reflect the importance of nodes in one layer as well as their importance in other interdependent layers. In this paper, we draw on the idea of biased random walks to define the Multiplex PageRank centrality measure in which the effects of the interplay between networks on the centrality of nodes are directly taken into account. In particular, depending on the intensity of the interaction between layers, we define the Additive, Multiplicative, Combined, and Neutral versions of Multiplex PageRank, and show how each version reflects the extent to which the importance of a node in one layer affects the importance the node can gain in another layer. We discuss these measures and apply them to an online multiplex social network. Findings indicate that taking the multiplex nature of the network into account helps uncover the emergence of rankings of nodes that differ from the rankings obtained from one single layer. Results provide support in favor of the salience of multiplex centrality measures, like Multiplex PageRank, for assessing the prominence of nodes embedded in multiple interacting networks, and for shedding a new light on structural properties that would otherwise remain undetected if each of the interacting networks were analyzed in isolation.

  11. A multiplex two-color real-time PCR method for quality-controlled molecular diagnostic testing of FFPE samples.

    Directory of Open Access Journals (Sweden)

    Jiyoun Yeo

    Full Text Available Reverse transcription quantitative real-time PCR (RT-qPCR tests support personalized cancer treatment through more clinically meaningful diagnosis. However, samples obtained through standard clinical pathology procedures are formalin-fixed, paraffin-embedded (FFPE and yield small samples with low integrity RNA containing PCR interfering substances. RT-qPCR tests able to assess FFPE samples with quality control and inter-laboratory reproducibility are needed.We developed an RT-qPCR method by which 1 each gene was measured relative to a known number of its respective competitive internal standard molecules to control for interfering substances, 2 two-color fluorometric hydrolysis probes enabled analysis on a real-time platform, 3 external standards controlled for variation in probe fluorescence intensity, and 4 pre-amplification maximized signal from FFPE RNA samples. Reagents were developed for four genes comprised by a previously reported lung cancer diagnostic test (LCDT then subjected to analytical validation using synthetic native templates as test articles to assess linearity, signal-to-analyte response, lower detection threshold, imprecision and accuracy. Fitness of this method and these reagents for clinical testing was assessed in FFPE normal (N = 10 and malignant (N = 10 lung samples.Reagents for each of four genes, MYC, E2F1, CDKN1A and ACTB comprised by the LCDT had acceptable linearity (R(2>0.99, signal-to-analyte response (slope 1.0 ± 0.05, lower detection threshold (<10 molecules and imprecision (CV <20%. Poisson analysis confirmed accuracy of internal standard concentrations. Internal standards controlled for experimentally introduced interference, prevented false-negatives and enabled pre-amplification to increase signal without altering measured values. In the fitness for purpose testing of this two-color fluorometric LCDT using surgical FFPE samples, the diagnostic accuracy was 93% which was similar to that previously reported

  12. Development of a Multiplex Real-Time PCR Assay for the Detection of Treponema pallidum, HCV, HIV-1, and HBV.

    Science.gov (United States)

    Zhou, Li; Gong, Rui; Lu, Xuan; Zhang, Yi; Tang, Jingfeng

    2015-01-01

    Treponema pallidum, hepatitis C virus (HCV), human immunodeficiency virus (HIV)-1, and hepatitis B virus (HBV) are major causes of sexually transmitted diseases passed through blood contact. The development of a sensitive and efficient method for detection is critical for early diagnosis and for large-scale screening of blood specimens in China. This study aims to establish an assay to detect these pathogens in clinical serum specimens. We established a TaqMan-locked nucleic acid (LNA) real-time polymerase chain reaction (PCR) assay for rapid, sensitive, specific, quantitative, and simultaneous detection and identification. The copy numbers of standards of these 4 pathogens were quantified. Standard curves were generated by determining the mean cycle threshold values versus 10-fold serial dilutions of standards over a range of 10(6) to 10(1) copies/μL, with the lowest detection limit of the assay being 10(1) copies/μL. The assay was applied to 328 clinical specimens and compared with enzyme-linked immunosorbent assay (ELISA) and commercial nucleic acid testing (NAT) methods. The assay identified 39 T. pallidum-, 96 HCV-, 13 HIV-1-, 123 HBV-, 5 HBV/HCV-, 1 T. pallidum/HBV-, 1 HIV-1/HCV-, and 1 HIV-1/T. pallidum-positive specimens. The high sensitivity of the assay confers strong potential for its use as a highly reliable, cost-effective, and useful molecular diagnostic tool for large-scale screening of clinical specimens. This assay will assist in the study of the pathogenesis and epidemiology of sexually transmitted blood diseases.

  13. Development of multiplex real-time PCR assays for identification of members of the Anopheles funestus species group

    Directory of Open Access Journals (Sweden)

    Field Linda M

    2009-12-01

    than AS-PCR. However, the cost of both the real-time PCR machine and fluorescently labelled probes required is falling and in the future the cost of this assay is likely to become closer to that of standard PCR.

  14. Detection of Campylobacter species and Arcobacter butzleri in stool samples by use of real-time multiplex PCR.

    Science.gov (United States)

    de Boer, Richard F; Ott, Alewijn; Güren, Pinar; van Zanten, Evert; van Belkum, Alex; Kooistra-Smid, Anna M D

    2013-01-01

    The presence of Campylobacter (or Campylobacter-like) species in stools from patients suspected of infectious gastroenteritis (n = 493) was investigated using real-time PCR for detection of Arcobacter butzleri (hsp60 gene), Campylobacter coli (ceuE gene), Campylobacter jejuni (mapA), five acknowledged pathogenic Campylobacter spp. (C16S_Lund assay), and the Campylobacter genus (C16S_LvI assay). In total, 71.4% of the samples were positive for Campylobacter DNA (n = 352) by a Campylobacter genus-specific (C16S_LvI) assay. A total of 23 samples (4.7%) were positive in the C16S_Lund assay, used for detection of C. jejuni, C. coli, C. lari, C. upsaliensis, and C. hyointestinalis. Subsequent identification of these samples yielded detection frequencies (DF) of 4.1% (C. jejuni), 0.4% (C. coli), and 0.4% (C. upsaliensis). The DF of A. butzleri was 0.4%. Interestingly, sequencing of a subgroup (n = 46) of C16S_LvI PCR-positive samples resulted in a considerable number of Campylobacter concisus-positive samples (n = 20). PCR-positive findings with the C16S_Lund and C. jejuni/C. coli-specific assays were associated with more serious clinical symptoms (diarrhea and blood). Threshold cycle (C(T)) values of C. jejuni/C. coli PCR-positive samples were comparable to those of the C16S_Lund PCR (P = 0.21). C(T) values for both assays were significantly lower than those of the C16S_LvI assay (P < 0.001 and P < 0.00001, respectively). In conclusion, this study demonstrated that in combination, the C. jejuni/C coli-specific assays and the C16S_Lund assay are both useful for routine screening purposes. Furthermore, the DF of the emerging pathogen C. concisus was at least similar to the DF of C. jejuni.

  15. Clinical diagnosis of early dengue infection by novel one-step multiplex real-time RT-PCR targeting NS1 gene.

    Science.gov (United States)

    Kim, Je-Hyoung; Chong, Chom-Kyu; Sinniah, Mangalam; Sinnadurai, Jeyaindran; Song, Hyun-Ok; Park, Hyun

    2015-04-01

    Dengue is a mosquito-borne disease that causes a public health problem in tropical and subtropical countries. Current immunological diagnostics based on IgM and/or nonstructural protein 1 (NS1) antigen are limited for acute dengue infection due to low sensitivity and accuracy. This study aimed to develop a one-step multiplex real-time RT-PCR assay showing higher sensitivity and accuracy than previous approaches. Serotype-specific primers and probes were designed through the multiple alignment of NS1 gene. The linearity and limit of detection (LOD) of the assay were determined. The assay was clinically validated with an evaluation panel that was immunologically tested by WHO and Malaysian specimens. The LOD of the assay was 3.0 log10 RNA copies for DENV-1, 2.0 for DENV-3, and 1.0 for DENV-2 and DENV-4. The assay showed 95.2% sensitivity (20/21) in an evaluation panel, whereas NS1 antigen- and anti-dengue IgM-based immunological assays exhibited 0% and 23.8-47.6% sensitivities, respectively. The assay showed 100% sensitivity both in NS1 antigen- and anti-dengue IgM-positive Malaysian specimens (26/26). The assay provided the information of viral loads and serotype with discrimination of heterotypic mixed infection. The assay could be clinically applied to early dengue diagnosis, especially during the first 5 days of illness and approximately 14 days after infection showing an anti-dengue IgM-positive response. Copyright © 2015 Elsevier B.V. All rights reserved.

  16. Optimization of a Relative Telomere Length Assay by Monochromatic Multiplex Real-Time Quantitative PCR on the LightCycler 480: Sources of Variability and Quality Control Considerations.

    Science.gov (United States)

    Hsieh, Anthony Y Y; Saberi, Sara; Ajaykumar, Abhinav; Hukezalie, Kyle; Gadawski, Izabella; Sattha, Beheroze; Côté, Hélène C F

    2016-05-01

    Telomere length (TL) measurement is central to many biomedical research, population, and epidemiology studies, with promising potential as a clinical tool. Various assays are used to determine TL, depending on the type and size of the sample. We describe the detailed optimization of a monochromatic multiplex real-time quantitative PCR (MMqPCR) assay for relative TL using the LightCycler 480. MMqPCR was initially developed using a different instrument with many separate reagents. Differences in instrument performance, reagents, and workflow required substantial optimization for the assay to be compatible with the LightCycler 480. We optimized the chemistry of the assay using a purchased one-component reaction mix and herein describe sources of variability and quality control relevant to the MMqPCR TL assay on any instrument. Finally, the assay was validated against other TL assays, such as terminal restriction fragment, Southern blot, and flow fluorescent in situ hybridization. The correlations obtained between data from MMqPCR and these assays (R(2) = 0.88 and 0.81) were comparable to those seen with the monoplex version (R(2) = 0.85 and 0.82) when the same samples were assayed. The intrarun and interrun CV ranged from 4.2% to 6.2% and 3.2% to 4.9%, respectively. We describe a protocol for measuring TL on the LightCycler platform that provides a robust high-throughput method applicable to clinical diagnostics or large-scale studies of archived specimens. Copyright © 2016 American Society for Investigative Pathology and the Association for Molecular Pathology. Published by Elsevier Inc. All rights reserved.

  17. Development and validation of two SYBR green PCR assays and a multiplex real-time PCR for the detection of Shiga toxin-producing Escherichia coli in meat.

    Science.gov (United States)

    Brusa, Victoria; Galli, Lucía; Linares, Luciano H; Ortega, Emanuel E; Lirón, Juan P; Leotta, Gerardo A

    2015-12-01

    Shiga toxin-producing Escherichia coli (STEC) are recognized as food-borne pathogens. We developed and validated two SYBR green PCR (SYBR-PCR) and a real-time multiplex PCR (RT-PCR) to detect stx1 and stx2 genes in meat samples, and compared these techniques in ground beef samples from retail stores. One set of primers and one hydrolysis probe were designed for each stx gene. For RT-PCR, an internal amplification control (IAC) was used. All PCR intra-laboratory validations were performed using pure strains and artificially contaminated ground beef samples. A total of 50 STEC and 30 non-STEC strains were used. Naturally contaminated ground beef samples (n=103) were obtained from retail stores and screened with SYBR-PCR and RT-PCR, and stx-positive samples were processed for STEC isolation. In the intra-laboratory validation, each PCR obtained a 1×10(2) CFU mL(-1) limit of detection and 100% inclusivity and exclusivity. The same results were obtained when different laboratory analysts in alternate days performed the assay. The level of agreement obtained with SYBR-PCR and RT-PCR was kappa=0.758 and 0.801 (P<0.001) for stx1 and stx2 gene detection, respectively. Two PCR strategies were developed and validated, and excellent performance with artificially contaminated ground beef samples was obtained. However, the efforts made to isolate STEC from retail store samples were not enough. Only 11 STEC strains were isolated from 35 stx-positive ground beef samples identically detected by all PCRs. The combination of molecular approaches based on the identification of a virulence genotypic profile of STEC must be considered to improve isolation. Copyright © 2015 Elsevier B.V. All rights reserved.

  18. Isolation and Identification of Campylobacter spp. from Poultry and Poultry By-Products in Tunisia by Conventional Culture Method and Multiplex Real-Time PCR.

    Science.gov (United States)

    Jribi, Hela; Sellami, Hanen; Mariam, Siala; Smaoui, Salma; Ghorbel, Asma; Hachicha, Salma; Benejat, Lucie; Messadi-Akrout, Feriel; Mégraud, Francis; Gdoura, Radhouane

    2017-10-01

    Thermophilic Campylobacter spp. are one of the primary causes of bacterial human diarrhea. The consumption of poultry meats, by-products, or both is suspected to be a major cause of human campylobacteriosis. The aims of this study were to determine the prevalence of thermophilic Campylobacter spp. in fresh poultry meat and poultry by-products by conventional culture methods and to confirm Campylobacter jejuni and Campylobacter coli isolates by using the multiplex PCR assay. Two hundred fifty fresh poultry samples were collected from a variety of supermarkets and slaughterhouses located in Sfax, Tunisia, including chicken (n =149) and turkey (n =101). The samples were analyzed using conventional microbiological examinations according to the 2006 International Organization for Standardization method (ISO 10272-1) for Campylobacter spp. Concurrently, a real-time PCR was used for identification of C. jejuni and C. coli . Of the 250 samples of poultry meat and poultry by-products, 25.6% (n = 64) were contaminated with Campylobacter spp. The highest prevalence of Campylobacter spp. was found in chicken meat (26.8%) followed by turkey meat (23.7%). Among the different products, poultry breasts showed the highest contamination (36.6%) followed by poultry by-products (30%), poultry wings (28%) and poultry legs (26%) showed the lowest contamination, and no contamination was found on neck skin. Of the 64 thermophilic Campylobacter isolates, C. jejuni (59.7%) was the most frequently isolated species and 10.9% of the isolates were identified as C. coli . All of the 64 Campylobacter isolates identified by the conventional culture methods were further confirmed by PCR. The seasonal peak of Campylobacter spp. contamination was in the warm seasons (spring and summer). The study concluded that high proportions of poultry meat and poultry by-products marketed in Tunisia are contaminated by Campylobacter spp. Furthermore, to ensure food safety, poultry meats must be properly cooked

  19. The Time Course of Perceptual Recovery Markers After Match Play in Division I-A College American Football.

    Science.gov (United States)

    Fullagar, Hugh H K; Govus, Andrew; Hanisch, James; Murray, Andrew

    2017-10-01

    To investigate the recovery time course of customized wellness markers (sleep, soreness, energy, and overall wellness) in response to match play in American Division I-A college football players. A retrospective research design was used. Wellness data were collected and analyzed for 2 American college football seasons. Perceptions of soreness, sleep, energy, and overall wellness were obtained for the day before each game (GD-1) and the days after each game (GD+2, GD+3, and GD+4). Standardized effect-size (ES) analyses ± 90% confidence intervals were used to interpret the magnitude of the mean differences between all time points for the start, middle, and finish of the season, using the following qualitative descriptors: 0-0.19 trivial, 0.2-0.59 small, 0.6-1.19 moderate, 1.2-1.99 large, <2.0 very large. Overall wellness showed small ES reductions on GD+2 (d = 0.22 ± 0.09, likely [94.8%]), GD+3 (d = 0.37 ± 0.15, very likely), and GD+4 (d = 0.29 ± 0.12, very likely) compared with GD-1. There were small ES reductions for soreness between GD-1 and GD+2, GD+3, and GD +4 (d = 0.21 ± 0.09, likely, d = 0.29 ± 0.12, very likely, and 0.30 ± 0.12, very likely, respectively). Small ES reductions were also evident between GD-1 and GD+3 (d = 0.21 ± 0.09, likely) for sleep. Feelings of energy showed small ESs on GD+3 (d = 0.27 ± 0.11, very likely) and GD+4 (d = 0.22 ± 0.09, likely) compared with GD-1. All wellness markers were likely to very likely worse on GD+3 and GD+4 than on GD-1. These findings show that perceptual wellness takes longer than 4 d to return to pregame levels and thus should be considered when prescribing training and/or recovery.

  20. Study comparing human papillomavirus (HPV) real-time multiplex PCR and Hybrid Capture II INNO-LiPA v2 HPV genotyping PCR assays

    DEFF Research Database (Denmark)

    Iftner, Thomas; Germ, Liesje; Swoyer, Ryan

    2009-01-01

    (HCII-LiPA v2). SurePath residual samples were split into two aliquots. One aliquot was subjected to HCII testing followed by DNA extraction and LiPA v2 genotyping. The second aliquot was shipped to a second laboratory, where DNA was extracted and HPV multiplex PCR testing was performed. Comparisons...

  1. Multiplex gas chromatography

    Science.gov (United States)

    Valentin, Jose R.

    1990-01-01

    The principles of the multiplex gas chromatography (GC) technique, which is a possible candidate for chemical analysis of planetary atmospheres, are discussed. Particular attention is given to the chemical modulators developed by present investigators for multiplex GC, namely, the thermal-desorption, thermal-decomposition, and catalytic modulators, as well as to mechanical modulators. The basic technique of multiplex GC using chemical modulators and a mechanical modulator is demonstrated. It is shown that, with the chemical modulators, only one gas stream consisting of the carrier in combination with the components is being analyzed, resulting in a simplified instrument that requires relatively few consumables. The mechanical modulator demonstrated a direct application of multiplex GC for the analysis of gases in atmosphere of Titan at very low pressures.

  2. Multiplexed Engineering in Biology.

    Science.gov (United States)

    Rogers, Jameson K; Church, George M

    2016-03-01

    Biotechnology is the manufacturing technology of the future. However, engineering biology is complex, and many possible genetic designs must be evaluated to find cells that produce high levels of a desired drug or chemical. Recent advances have enabled the design and construction of billions of genetic variants per day, but evaluation capacity remains limited to thousands of variants per day. Here we evaluate biological engineering through the lens of the design–build–test cycle framework and highlight the role that multiplexing has had in transforming the design and build steps. We describe a multiplexed solution to the ‘test’ step that is enabled by new research. Achieving a multiplexed test step will permit a fully multiplexed engineering cycle and boost the throughput of biobased product development by up to a millionfold.

  3. Bilevel alarm monitoring multiplexer

    International Nuclear Information System (INIS)

    Johnson, C.S.

    1977-06-01

    This report describes the operation of the Bilevel Alarm Monitoring Multiplexer used in the Adaptive Intrusion Data System (AIDS) to transfer and control alarm signals being sent to the Nova 2 computer, the Memory Controlled Data Processor, and its own integral Display Panel. The multiplexer can handle 48 alarm channels and format the alarms into binary formats compatible with the destination of the alarm data

  4. Microgravity validation of a novel system for RNA isolation and multiplex quantitative real time PCR analysis of gene expression on the International Space Station.

    Directory of Open Access Journals (Sweden)

    Macarena Parra

    Full Text Available The International Space Station (ISS National Laboratory is dedicated to studying the effects of space on life and physical systems, and to developing new science and technologies for space exploration. A key aspect of achieving these goals is to operate the ISS National Lab more like an Earth-based laboratory, conducting complex end-to-end experimentation, not limited to simple microgravity exposure. Towards that end NASA developed a novel suite of molecular biology laboratory tools, reagents, and methods, named WetLab-2, uniquely designed to operate in microgravity, and to process biological samples for real-time gene expression analysis on-orbit. This includes a novel fluidic RNA Sample Preparation Module and fluid transfer devices, all-in-one lyophilized PCR assays, centrifuge, and a real-time PCR thermal cycler. Here we describe the results from the WetLab-2 validation experiments conducted in microgravity during ISS increment 47/SPX-8. Specifically, quantitative PCR was performed on a concentration series of DNA calibration standards, and Reverse Transcriptase-quantitative PCR was conducted on RNA extracted and purified on-orbit from frozen Escherichia coli and mouse liver tissue. Cycle threshold (Ct values and PCR efficiencies obtained on-orbit from DNA standards were similar to Earth (1 g controls. Also, on-orbit multiplex analysis of gene expression from bacterial cells and mammalian tissue RNA samples was successfully conducted in about 3 h, with data transmitted within 2 h of experiment completion. Thermal cycling in microgravity resulted in the trapping of gas bubbles inside septa cap assay tubes, causing small but measurable increases in Ct curve noise and variability. Bubble formation was successfully suppressed in a rapid follow-up on-orbit experiment using standard caps to pressurize PCR tubes and reduce gas release during heating cycles. The WetLab-2 facility now provides a novel operational on-orbit research capability for

  5. Multiplex Real-Time PCR Assay Using TaqMan Probes for the Identification of Trypanosoma cruzi DTUs in Biological and Clinical Samples

    Science.gov (United States)

    Cura, Carolina I.; Duffy, Tomas; Lucero, Raúl H.; Bisio, Margarita; Péneau, Julie; Jimenez-Coello, Matilde; Calabuig, Eva; Gimenez, María J.; Valencia Ayala, Edward; Kjos, Sonia A.; Santalla, José; Mahaney, Susan M.; Cayo, Nelly M.; Nagel, Claudia; Barcán, Laura; Málaga Machaca, Edith S.; Acosta Viana, Karla Y.; Brutus, Laurent; Ocampo, Susana B.; Aznar, Christine; Cuba Cuba, Cesar A.; Gürtler, Ricardo E.; Ramsey, Janine M.; Ribeiro, Isabela; VandeBerg, John L.; Yadon, Zaida E.; Osuna, Antonio; Schijman, Alejandro G.

    2015-01-01

    Background Trypanosoma cruzi has been classified into six Discrete Typing Units (DTUs), designated as TcI–TcVI. In order to effectively use this standardized nomenclature, a reproducible genotyping strategy is imperative. Several typing schemes have been developed with variable levels of complexity, selectivity and analytical sensitivity. Most of them can be only applied to cultured stocks. In this context, we aimed to develop a multiplex Real-Time PCR method to identify the six T. cruzi DTUs using TaqMan probes (MTq-PCR). Methods/Principal Findings The MTq-PCR has been evaluated in 39 cultured stocks and 307 biological samples from vectors, reservoirs and patients from different geographical regions and transmission cycles in comparison with a multi-locus conventional PCR algorithm. The MTq-PCR was inclusive for laboratory stocks and natural isolates and sensitive for direct typing of different biological samples from vectors, reservoirs and patients with acute, congenital infection or Chagas reactivation. The first round SL-IR MTq-PCR detected 1 fg DNA/reaction tube of TcI, TcII and TcIII and 1 pg DNA/reaction tube of TcIV, TcV and TcVI reference strains. The MTq-PCR was able to characterize DTUs in 83% of triatomine and 96% of reservoir samples that had been typed by conventional PCR methods. Regarding clinical samples, 100% of those derived from acute infected patients, 62.5% from congenitally infected children and 50% from patients with clinical reactivation could be genotyped. Sensitivity for direct typing of blood samples from chronic Chagas disease patients (32.8% from asymptomatic and 22.2% from symptomatic patients) and mixed infections was lower than that of the conventional PCR algorithm. Conclusions/Significance Typing is resolved after a single or a second round of Real-Time PCR, depending on the DTU. This format reduces carryover contamination and is amenable to quantification, automation and kit production. PMID:25993316

  6. Inclusive bit error rate analysis for coherent optical code-division multiple-access system

    Science.gov (United States)

    Katz, Gilad; Sadot, Dan

    2002-06-01

    Inclusive noise and bit error rate (BER) analysis for optical code-division multiplexing (OCDM) using coherence techniques is presented. The analysis contains crosstalk calculation of the mutual field variance for different number of users. It is shown that the crosstalk noise depends deeply on the receiver integration time, the laser coherence time, and the number of users. In addition, analytical results of the power fluctuation at the received channel due to the data modulation at the rejected channels are presented. The analysis also includes amplified spontaneous emission (ASE)-related noise effects of in-line amplifiers in a long-distance communication link.

  7. Within-herd prevalence thresholds for herd-level detection of mastitis pathogens using multiplex real-time PCR in bulk tank milk samples.

    Science.gov (United States)

    Soltau, J B; Einax, E; Klengel, K; Katholm, J; Failing, K; Wehrend, A; Donat, K

    2017-10-01

    The objective of the study was to assess the value of quantitative multiplex real-time PCR examination of bulk tank milk samples for bovine mastitis pathogens as a tool for herd level diagnosis. Using a logistic regression model, this study is aimed at calculating the threshold level of the apparent within-herd prevalence as determined by quarter milk sample cultivation of all lactating cows, thus allowing the detection of a herd positive for a specific pathogen within certain probability levels. A total of 6,335 quarter milk samples were collected and cultured from 1,615 cows on 51 farms in Germany. Bulk tank milk samples were taken from each farm and tested by bacterial culture as well as the commercial PCR assay Mastit 4A (DNA Diagnostic A/S, Risskov, Denmark) identifying Staphylococcus aureus, Streptococcus dysgalactiae, Streptococcus agalactiae, and Streptococcus uberis. In addition, PCR was performed on pooled herd milk samples containing milk aliquots from all lactating cows in each of the 51 herds. Only 1 out of the 51 herds was found PCR positive for Streptococcus agalactiae in bulk tank and pooled herd milk samples, and cultured quarter milk samples. Spearman's rank correlations between the cycle threshold value of bulk tank milk PCR and the apparent within-herd prevalence were calculated in regard to Staphylococcus aureus, Streptococcus dysgalactiae, and Streptococcus uberis. For these pathogens, significant correlations were found. If 1 bulk tank milk sample per herd was tested, the estimated within-herd prevalence thresholds for 90% probability of detection were 27.6% for Staphylococcus aureus, 9.2% for Streptococcus dysgalactiae, and 13.8% for Streptococcus uberis on the cow level. On the quarter level, the within-herd prevalence had to be at least 32.6% for Staphylococcus aureus, 1.7% for Streptococcus dysgalactiae, and 4.3% for Streptococcus uberis to detect a herd as positive using a single bulk milk sample. The results indicate that mastitis

  8. Internally controlled, generic real-time PCR for quantification and multiplex real-time PCR with serotype-specific probes for serotyping of dengue virus infections

    NARCIS (Netherlands)

    Menting, Sandra; Thai, Khoa T. D.; Nga, Tran T. T.; Phuong, Hoang L.; Klatser, Paul; Wolthers, Katja C.; Binh, Tran Q.; de Vries, Peter J.; Beld, Marcel

    2011-01-01

    Dengue has become a global public health problem and a sensitive diagnostic test for early phase detection can be life saving. An internally controlled, generic real-time PCR was developed and validated by testing serial dilutions of a DENV positive control RNA in the presence of a fixed amount of

  9. Effect of beat noise on the performance of two-dimensional time-spreading/wavelength-hopping optical code-division multiple-access systems

    Science.gov (United States)

    Bazan, T.; Harle, D.; Andonovic, I.; Meenakshi, M.

    2005-03-01

    The effect of beat noise on optical code-division multiple-access (OCDMA) systems using a range of two-dimensional (2-D) time-spreading/wavelength-hopping (TW) code families is presented. A derivation of a general formula for the error probability of the system is given. The properties of the 2-D codes--namely, the structure, length, and cross-correlation characteristics--are found to have a great influence on system performance. Improved performance can be obtained by use of real-time dynamic thresholding.

  10. Low-Complexity Block Turbo Equalization for OFDM Systems in Time-Varying Channels

    NARCIS (Netherlands)

    Fang, K.; Rugini, L.; Leus, G.

    2008-01-01

    We propose low-complexity block turbo equalizers for orthogonal frequency-division multiplexing (OFDM) systems in time-varying channels. The presented work is based on a soft minimum mean-squared error (MMSE) block linear equalizer (BLE) that exploits the banded structure of the frequency-domain

  11. Quantitative multiplex detection of plant pathogens using a novel ligation probe-based system coupled with universal, high-throughput real-time PCR on OpenArrays(TM)

    NARCIS (Netherlands)

    Doorn, van R.; Szemes, M.; Bonants, P.J.M.; Kowalchuk, G.A.; Salles, J.F.; Ortenberg, E.; Schoen, C.D.

    2007-01-01

    Background - Diagnostics and disease-management strategies require technologies to enable the simultaneous detection and quantification of a wide range of pathogenic microorganisms. Most multiplex, quantitative detection methods available suffer from compromises between the level of multiplexing,

  12. Topology-optimized silicon photonic wire mode (de)multiplexer

    DEFF Research Database (Denmark)

    Frellsen, Louise Floor; Frandsen, Lars Hagedorn; Ding, Yunhong

    2015-01-01

    We have designed and for the first time experimentally verified a topology optimized mode (de)multiplexer, which demultiplexes the fundamental and the first order mode of a double mode photonic wire to two separate single mode waveguides (and multiplexes vice versa). The device has a footprint...

  13. Selected mapping based orthogonal frequency division multiplexing system (OFDM) for the reduction of peak to average power ratio (PAPR) using higher number of novel phase sequences under 32-QAM

    Science.gov (United States)

    Gupta, Prabal; Singh, Balpreet; Arora, Krishan

    2017-07-01

    The very high peak to average power ratio (PAPR) is the biggest problem faced by OFDM system which ultimately causes distortion in the transmitted data. In the literatures various techniques have been proposed for the reduction of PAPR. One of the important technique which is known as Selected Mapping (SLM) or distortion-less technique proposed by several literature for the reduction of PAPR. But SLM technique generally uses several number of randomly designed phase sequence in frequency domain so that after inverse fast Fourier transform (IFFT) when data is converted into corresponding time domain sequence it can be optimized accordingly. Henceforth, in this paper we are proposing a higher number of novel phase sequence based SLM with 32-Quadrature amplitude modulation (QAM) under various sub carriers like 32, 64, 128, 256 and 512. Probabilistic analysis with the help of complementary cumulative distribution function (CCDF) clearly depicts the remarkable performance of our proposed algorithm in comparison with conventional OFDM system.

  14. Microprocessorized message multiplexer

    International Nuclear Information System (INIS)

    Ejzman, S.; Guglielmi, L.; Jaeger, J.J.

    1980-07-01

    The 'Microprocessorized Message Multiplexer' is an elementary development tool used to create and debug the software of a target microprocessor (User Module: UM). It connects together four devices: a terminal, a cassette recorder, the target microprocessor and a host computer where macro and editor for the M 6800 microprocessor are resident [fr

  15. Multiplex editing system

    DEFF Research Database (Denmark)

    2015-01-01

    The present invention relates to a multiplex editing system. The system allows multiple editing of nucleic acid sequences such as genomic sequences, such as knockins of genes of interest in a genome, knockouts of genomic sequences and/or allele replacement. Also provided herein are a method...

  16. Evaluation of a Multiplex Real-Time Reverse Transcriptase PCR Assay for Detection and Differentiation of Influenza Viruses A and B during the 2001-2002 Influenza Season in Israel

    Science.gov (United States)

    Hindiyeh, Musa; Levy, Virginia; Azar, Roberto; Varsano, Noemi; Regev, Liora; Shalev, Yael; Grossman, Zehava; Mendelson, Ella

    2005-01-01

    The ability to rapidly diagnose influenza virus infections is of the utmost importance in the evaluation of patients with upper respiratory tract infections. It is also important for the influenza surveillance activities performed by national influenza centers. In the present study we modified a multiplex real-time reverse transcriptase PCR (RT-PCR) assay (which uses TaqMan chemistry) and evaluated it for its ability to detect and concomitantly differentiate influenza viruses A and B in 370 patient samples collected during the 2001-2002 influenza season in Israel. The performance of the TaqMan assay was compared to those of a multiplex one-step RT-PCR with gel detection, a shell vial immunofluorescence assay, and virus isolation in tissue culture. The TaqMan assay had an excellent sensitivity for the detection of influenza viruses compared to that of tissue culture. The overall sensitivity and specificity of the TaqMan assay compared to the results of culture were 98.4 and 85.5%, respectively. The sensitivity and specificity of the TaqMan assay for the detection of influenza virus A alone were 100 and 91.1%, respectively. On the other hand, the sensitivity and specificity for the detection of influenza virus B alone were 95.7 and 98.7%, respectively. The rapid turnaround time for the performance of the TaqMan assay (4.5 h) and the relatively low direct cost encourage the routine use of this assay in place of tissue culture. We conclude that the multiplex TaqMan assay is highly suitable for the rapid diagnosis of influenza virus infections both in well-established molecular biology laboratories and in reference clinical laboratories. PMID:15695650

  17. [Detection of Echinococcus granulosus and Echinococcus multilocularis in cyst samples using a novel single tube multiplex real-time polymerase chain reaction].

    Science.gov (United States)

    Can, Hüseyin; İnceboz, Tonay; Caner, Ayşe; Atalay Şahar, Esra; Karakavuk, Muhammet; Döşkaya, Mert; Çelebi, Fehmi; Değirmenci Döşkaya, Aysu; Gülçe İz, Sultan; Gürüz, Yüksel; Korkmaz, Metin

    2016-04-01

    Cystic echinococcosis (CE) and alveolar echinococcosis (AE) caused by Echinococcus granulosus and Echinococcus multilocularis, respectively, are important helminthic diseases worldwide as well as in our country. Epidemiological studies conducted in Turkey showed that the prevalence of CE is 291-585/100.000. It has also been showed that the seroprevalence of AE is 3.5%. For the diagnosis of CE and AE, radiological (ultrasonography, computed tomography, magnetic resonance) and serological methods, in addition to clinical findings, are being used. The definitive diagnosis relies on pathological examination When the hydatid cysts are sterile or does not contain protoscolex, problems may occur during pathological discrimination of E.granulosus and E.multilocularis species. In this study, we aimed to develop a novel multiplex real-time polymerase chain reaction (M-RT-PCR) targeting mitochondrial 12S rRNA gene of E.granulosus and E.multilocularis using Echi S (5'-TTTATGAATATTGTGACCCTGAGAT-3') and Echi A (5'-GGTCTTAACTCAACTCATGGAG-3') primers and three different probes; Anchor Ech (5'-GTTTGCCACCTCGATGTTGACTTAG-fluoroscein-3'), Granulosus (5'-LC640-CTAAGGTTTTGGTGTAGTAATTGATATTTT-phosphate-3') and Multilocularis (5'-LC705-CTGTGATCTTGGTGTAGTAGTTGAGATT-phosphate-3') that will enable the diagnosis of CE and AE in same assay. During M-RTR-PCR, plasmids containing E.granulosus (GenBank: AF297617.1) and E.multilocularis (GenBank: NC_000928.2) mitochondrial 12S rRNA regions were used as positive controls. Cysts samples of patients which were pathologically confirmed to be CE (n: 10) and AE (n: 15) and healthy human DNA samples (n: 25) as negative control as well as DNA samples of 12 different parasites (Taenia saginata, Hymenolepis nana, Trichuris trichiura, Fasciola hepatica, Enterobius vermicularis, Toxoplasma gondii, Pneumocystis jirovecii, Trichomonas vaginalis, Cryptosporidium hominis, Strongyloides stercoralis, Plasmodium falciparum, Plasmodium vivax) were used to develop M

  18. Extracting information from multiplex networks

    Science.gov (United States)

    Iacovacci, Jacopo; Bianconi, Ginestra

    2016-06-01

    Multiplex networks are generalized network structures that are able to describe networks in which the same set of nodes are connected by links that have different connotations. Multiplex networks are ubiquitous since they describe social, financial, engineering, and biological networks as well. Extending our ability to analyze complex networks to multiplex network structures increases greatly the level of information that is possible to extract from big data. For these reasons, characterizing the centrality of nodes in multiplex networks and finding new ways to solve challenging inference problems defined on multiplex networks are fundamental questions of network science. In this paper, we discuss the relevance of the Multiplex PageRank algorithm for measuring the centrality of nodes in multilayer networks and we characterize the utility of the recently introduced indicator function Θ ˜ S for describing their mesoscale organization and community structure. As working examples for studying these measures, we consider three multiplex network datasets coming for social science.

  19. One-step multiplex real-time RT-PCR assay for detecting and genotyping wild-type group A rotavirus strains and vaccine strains (Rotarix® and RotaTeq®) in stool samples

    Science.gov (United States)

    Mijatovic-Rustempasic, Slavica; Esona, Mathew D.; Tam, Ka Ian; Quaye, Osbourne; Bowen, Michael D.

    2016-01-01

    Background. Group A rotavirus (RVA) infection is the major cause of acute gastroenteritis (AGE) in young children worldwide. Introduction of two live-attenuated rotavirus vaccines, RotaTeq® and Rotarix®, has dramatically reduced RVA associated AGE and mortality in developed as well as in many developing countries. High-throughput methods are needed to genotype rotavirus wild-type strains and to identify vaccine strains in stool samples. Quantitative RT-PCR assays (qRT-PCR) offer several advantages including increased sensitivity, higher throughput, and faster turnaround time. Methods. In this study, a one-step multiplex qRT-PCR assay was developed to detect and genotype wild-type strains and vaccine (Rotarix® and RotaTeq®) rotavirus strains along with an internal processing control (Xeno or MS2 RNA). Real-time RT-PCR assays were designed for VP7 (G1, G2, G3, G4, G9, G12) and VP4 (P[4], P[6] and P[8]) genotypes. The multiplex qRT-PCR assay also included previously published NSP3 qRT-PCR for rotavirus detection and Rotarix® NSP2 and RotaTeq® VP6 qRT-PCRs for detection of Rotarix® and RotaTeq® vaccine strains respectively. The multiplex qRT-PCR assay was validated using 853 sequence confirmed stool samples and 24 lab cultured strains of different rotavirus genotypes. By using thermostable rTth polymerase enzyme, dsRNA denaturation, reverse transcription (RT) and amplification (PCR) steps were performed in single tube by uninterrupted thermocycling profile to reduce chances of sample cross contamination and for rapid generation of results. For quantification, standard curves were generated using dsRNA transcripts derived from RVA gene segments. Results. The VP7 qRT-PCRs exhibited 98.8–100% sensitivity, 99.7–100% specificity, 85–95% efficiency and a limit of detection of 4–60 copies per singleplex reaction. The VP7 qRT-PCRs exhibited 81–92% efficiency and limit of detection of 150–600 copies in multiplex reactions. The VP4 qRT-PCRs exhibited 98.8

  20. High Speed Precompensated Nonlinear Frequency-Division Multiplexed Transmissions

    Science.gov (United States)

    Le, Son Thai; Aref, Vahid; Buelow, Henning

    2018-03-01

    Record-high data rate of 125 Gb/s and SE over 2 bits/s/Hz in burst-mode single-polarization NFDM transmissions were achieved over 976 km of SSMF with EDFA-only amplification by transmitting and processing 222 32 QAM-modulated nonlinear subcarriers simultaneously

  1. Frequency division multiplexing in wireless underwater acoustic LANs

    Science.gov (United States)

    Bessios, Anthony G.; Caimi, Frank M.

    1995-09-01

    On overview of optical technologies, active and passive components, and systems that are deemed suitable for wireless communications is presented in this paper. Specifically addressed is the use of onboard photonics in advanced spacecraft, satellite, etc. for applications in wireless communications. To assess its viability in potential commercial applications, the state-of-the-art of phonics technology and future prospects for economical large capacity multi-channel services is briefly reviewed.

  2. Dense Wavelength Division (De Multiplexers Based on Fiber Bragg Gratings

    Directory of Open Access Journals (Sweden)

    S. BENAMEUR

    2014-05-01

    Full Text Available This study is to measure the impact of demultiplexers based on Fiber Bragg Grating (FBG filter on performance of DWDM system for optical access network. An optical transmission link has been established in which we have inserted a demultiplexer based on four different FBG filters. The first step will be the characterization of FBG’s filters (i.e. uniform FBG, Gaussian apodized Grating, chirped FBG to explain their behavior in the optical link. The simulations were conducted for different fiber’s lengths, filter bandwidth and different received power to get the best system performance. This helped to assess their impact on the link performance in terms of Bit Error Rate (BER.

  3. Single-mode multicore fiber for dense space division multiplexing

    DEFF Research Database (Denmark)

    Sasaki, Yusuke; Amma, Yoshimichi; Takenaga, Katsuhiro

    2016-01-01

    Single-mode multicore fiber (SM-MCF) is attractive for high-capacity transmission. Our fabricated SM-MCFs achieve high core count and low crosstalk with a cladding diameter of 230 µm. Characteristics of fan-in/fan-out for the SM-MCFs are also investigated....

  4. Mode Division Multiplexing Exploring Hollow-Core Photonic Bandgap Fibers

    DEFF Research Database (Denmark)

    Xu, Jing; Lyngso, Jens Kristian; Leick, Lasse

    2013-01-01

    -return to zero (NRZ) data signals over a 30 m 7-cell HC-PBGF using the offset mode launching method. In another experiment, a short piece of 19-cell HC-PBGF was used to transmit two 20 Gbit/s NRZ channels using a spatial light modulator for precise mode excitation. Bit-error-ratio (BER) performances below...

  5. A two-tube multiplex real-time RT-PCR assay for the detection of four hemorrhagic fever viruses: severe fever with thrombocytopenia syndrome virus, Hantaan virus, Seoul virus, and dengue virus.

    Science.gov (United States)

    Li, Zhifeng; Qi, Xian; Zhou, Minghao; Bao, Changjun; Hu, Jianli; Wu, Bin; Wang, Shenjiao; Tan, Zhongmin; Fu, Jianguang; Shan, Jun; Zhu, Yefei; Tang, Fenyang

    2013-09-01

    The aim of this study was to develop and evaluate a two-tube multiplex real-time RT-PCR assay for the detection and identification of four viral hemorrhagic fever (VHF) pathogens, severe fever with thrombocytopenia syndrome virus (SFTSV), Hantaan virus (HTNV), Seoul virus (SEOV), and dengue virus (DENV), from human clinical samples. The two-tube multiplex real-time RT-PCR assay we developed has a sensitivity of 10 copies/μL for each of the targets, and the performance was linear within the range of at least 10(7) transcript copies. Moreover, we evaluated the specificity of the assay using other virus RNA as template, and found no cross-reactivity. This new assay is able to detect SFTSV, HTNV, SEOV and DENV in two reactions and brings a cost of 40 % compared to separate reactions. Evaluation of this assay with clinical serum samples from laboratory-confirmed patients and healthy donors showed 100 % clinical diagnostic sensitivity and over 99 % specificity. The assay was applied for scanning 346 clinical samples collected from patients admitted to the hospital with suspected VHF and compared with virus isolation and immunofluorescence assay (IFA). The assay indentified 59 SFTSV-, 12 HTNV-, 11 SEOV- and 9 DENV-positive samples and showed higher sensitivity. This assay thus provides a reliable and cost-effective screening tool for early clinical diagnosis of SFTSV, HTNV, SEOV and DENV in the acute phase.

  6. An alarm multiplexer communication system

    International Nuclear Information System (INIS)

    Herrera, G.V.

    1986-01-01

    A low cost Alarm Multiplexer Communication System (AMCS) has been developed to perform the security sensor monitoring and control functions and to provide remote relay control capability for integrated security systems. AMCS has a distributed multiplexer/repeater architecture with up to four dual communication loops and dual control computers that guarantee total system operation under any single point failure condition. Each AMCS can control up to 4096 sensors and 2048 remote relays. AMCS reports alarm status information to and is controlled by either one or two Host computers. This allows for independent operation of primary and backup security command centers. AMCS communicates with the Host computers over an asynchronous serial communication link and has a message protocol which allows AMCS to fully recover from lost messages or large blocks of data communication errors. This paper describes the AMCS theory of operation, AMCS fault modes, and AMCS system design methodology. Also, cost and timing information is presented. AMCS is being used and considered for several DOE and DOD facilities

  7. Evaluation of two real-time multiplex PCR screening assays detecting fetal RHD in plasma from RhD negative women to ascertain the requirement for antenatal RhD prophylaxis

    DEFF Research Database (Denmark)

    Clausen, Frederik Banch; Krog, Grethe Risum; Rieneck, Klaus

    2011-01-01

    OBJECTIVE: To evaluate two different multiplex real-time PCR assays detecting fetal RHD for screening of RhD negative women in relation to antenatal RhD prophylaxis. METHODS: We designed a duplex assay for the detection of RHD exon 7 and 10 and a triplex assay for the detection of RHD exon 7, 10...... and 5. We used the same fluorescent dye for the exon 7 and 10 probes to increase sensitivity; exon 5 was VIC labeled. We evaluated possible inhibition of DNA amplification with dilution experiments. We then tested the two multiplex assays with DNA extracted from 97 plasma samples from 38 RhD negative...... assay (exon 7/10), accuracy was 94.2%. Detection of exon 5 was less reliable. CONCLUSION: The duplex assay using exon 7/10 was the most reliable for prenatal prediction of fetal RhD type as a candidate assay for screening of RhD negative women in relation to antenatal RhD prophylaxis. The triplex assay...

  8. A screening method for the detection of the 35S promoter and the nopaline synthase terminator in genetically modified organisms in a real-time multiplex polymerase chain reaction using high-resolution melting-curve analysis.

    Science.gov (United States)

    Akiyama, Hiroshi; Nakamura, Fumi; Yamada, Chihiro; Nakamura, Kosuke; Nakajima, Osamu; Kawakami, Hiroshi; Harikai, Naoki; Furui, Satoshi; Kitta, Kazumi; Teshima, Reiko

    2009-11-01

    To screen for unauthorized genetically modified organisms (GMO) in the various crops, we developed a multiplex real-time polymerase chain reaction high-resolution melting-curve analysis method for the simultaneous qualitative detection of 35S promoter sequence of cauliflower mosaic virus (35SP) and the nopaline synthase terminator (NOST) in several crops. We selected suitable primer sets for the simultaneous detection of 35SP and NOST and designed the primer set for the detection of spiked ColE1 plasmid to evaluate the validity of the polymerase chain reaction (PCR) analyses. In addition, we optimized the multiplex PCR conditions using the designed primer sets and EvaGreen as an intercalating dye. The contamination of unauthorized GMO with single copy similar to NK603 maize can be detected as low as 0.1% in a maize sample. Furthermore, we showed that the present method would be applicable in identifying GMO in various crops and foods like authorized GM soybean, authorized GM potato, the biscuit which is contaminated with GM soybeans and the rice which is contaminated with unauthorized GM rice. We consider this method to be a simple and reliable assay for screening for unauthorized GMO in crops and the processing food products.

  9. Robust Preamble-Based Timing Synchronization for OFDM Systems

    Directory of Open Access Journals (Sweden)

    Yun Liu

    2017-01-01

    Full Text Available This study presents a novel preamble-based timing offset estimation method for orthogonal frequency division multiplexing (OFDM systems. The proposed method is robust, immune to the carrier frequency offset (CFO, and independent of the structure of the preamble. The performance of the new method is demonstrated in terms of mean square error (MSE obtained by simulation in multipath fading channels. The results indicate that the new method significantly improves timing performance in comparison with existing methods.

  10. Functional Multiplex PageRank

    Science.gov (United States)

    Iacovacci, Jacopo; Rahmede, Christoph; Arenas, Alex; Bianconi, Ginestra

    2016-10-01

    Recently it has been recognized that many complex social, technological and biological networks have a multilayer nature and can be described by multiplex networks. Multiplex networks are formed by a set of nodes connected by links having different connotations forming the different layers of the multiplex. Characterizing the centrality of the nodes in a multiplex network is a challenging task since the centrality of the node naturally depends on the importance associated to links of a certain type. Here we propose to assign to each node of a multiplex network a centrality called Functional Multiplex PageRank that is a function of the weights given to every different pattern of connections (multilinks) existent in the multiplex network between any two nodes. Since multilinks distinguish all the possible ways in which the links in different layers can overlap, the Functional Multiplex PageRank can describe important non-linear effects when large relevance or small relevance is assigned to multilinks with overlap. Here we apply the Functional Page Rank to the multiplex airport networks, to the neuronal network of the nematode C. elegans, and to social collaboration and citation networks between scientists. This analysis reveals important differences existing between the most central nodes of these networks, and the correlations between their so-called pattern to success.

  11. Multiplexed FBG Monitoring System for Forecasting Coalmine Water Inrush Disaster

    Directory of Open Access Journals (Sweden)

    B. Liu

    2012-01-01

    Full Text Available This paper presents a novel fiber-Bragg-grating- (FBG- based system which can monitor and analyze multiple parameters such as temperature, strain, displacement, and seepage pressure simultaneously for forecasting coalmine water inrush disaster. The sensors have minimum perturbation on the strain field. And the seepage pressure sensors adopt a drawbar structure and employ a corrugated diaphragm to transmit seepage pressure to the axial strain of FBG. The pressure sensitivity is 20.20 pm/KPa, which is 6E3 times higher than that of ordinary bare FBG. The FBG sensors are all preembedded on the roof of mining area in coalmine water inrush model test. Then FBG sensing network is set up applying wavelength-division multiplexing (WDM technology. The experiment is carried out by twelve steps, while the system acquires temperature, strain, displacement, and seepage pressure signals in real time. The results show that strain, displacement, and seepage pressure monitored by the system change significantly before water inrush occurs, and the strain changes firstly. Through signal fusion analyzed it can be concluded that the system provides a novel way to forecast water inrush disaster successfully.

  12. Microwave multiplex readout for superconducting sensors

    Energy Technology Data Exchange (ETDEWEB)

    Ferri, E., E-mail: elena.ferri@mib.infn.it [Università Milano-Bicocca, Milan (Italy); INFN Sez. di Milano-Bicocca, Milan (Italy); Becker, D.; Bennett, D. [NIST, Boulder, CO (United States); Faverzani, M. [Università Milano-Bicocca, Milan (Italy); INFN Sez. di Milano-Bicocca, Milan (Italy); Fowler, J.; Gard, J. [NIST, Boulder, CO (United States); Giachero, A. [Università Milano-Bicocca, Milan (Italy); INFN Sez. di Milano-Bicocca, Milan (Italy); Hays-Wehle, J.; Hilton, G. [NIST, Boulder, CO (United States); Maino, M. [Università Milano-Bicocca, Milan (Italy); INFN Sez. di Milano-Bicocca, Milan (Italy); Mates, J. [NIST, Boulder, CO (United States); Puiu, A.; Nucciotti, A. [Università Milano-Bicocca, Milan (Italy); INFN Sez. di Milano-Bicocca, Milan (Italy); Reintsema, C.; Schmidt, D.; Swetz, D.; Ullom, J.; Vale, L. [NIST, Boulder, CO (United States)

    2016-07-11

    The absolute neutrino mass scale is still an outstanding challenge in both particle physics and cosmology. The calorimetric measurement of the energy released in a nuclear beta decay is a powerful tool to determine the effective electron-neutrino mass. In the last years, the progress on low temperature detector technologies has allowed to design large scale experiments aiming at pushing down the sensitivity on the neutrino mass below 1 eV. Even with outstanding performances in both energy (~ eV on keV) and time resolution (~ 1 μs) on the single channel, a large number of detectors working in parallel is required to reach a sub-eV sensitivity. Microwave frequency domain readout is the best available technique to readout large array of low temperature detectors, such as Transition Edge Sensors (TESs) or Microwave Kinetic Inductance Detectors (MKIDs). In this way a multiplex factor of the order of thousands can be reached, limited only by the bandwidth of the available commercial fast digitizers. This microwave multiplexing system will be used to readout the HOLMES detectors, an array of 1000 microcalorimeters based on TES sensors in which the {sup 163}Ho will be implanted. HOLMES is a new experiment for measuring the electron neutrino mass by means of the electron capture (EC) decay of {sup 163}Ho. We present here the microwave frequency multiplex which will be used in the HOLMES experiment and the microwave frequency multiplex used to readout the MKID detectors developed in Milan as well.

  13. Prokaryotic cell division: flexible and diverse

    NARCIS (Netherlands)

    den Blaauwen, T.

    2013-01-01

    Gram-negative rod-shaped bacteria have different approaches to position the cell division initiating Z-ring at the correct moment in their cell division cycle. The subsequent maturation into a functional division machine occurs in vastly different species in two steps with appreciable time in

  14. Experimental Verification of Multiple-input Multiple Output (MIMO) Beamforming Capabilities Using a Time-division Coherent MIMO Radar

    Science.gov (United States)

    2015-04-01

    andGaNAs to be50–60 meV, indicating that holes are the species responsible for the leakage effects. Conclusions: We have demonstrated the first high...Real-time measurements of GaInNAs nitrogen plasma ion flux’. Proc. 2003 North American MBE Conf., Keystone , CO, USA, p. 133 8 Setiagung, S

  15. Tunable Passband flattened 1-from-16 Binary-Tree structured Add-after-Drop Multiplexer Using SiON Waveguide Technology

    NARCIS (Netherlands)

    Roeloffzen, C.G.H.; Horst, F.; Horst, F.; Offrein, B.J.; Offrein, B.J.; Germann, R.; Bona, G.L.; Salemink, H.W.M.; de Ridder, R.M.

    2000-01-01

    A tunable, flat-passband, 1-from-16 add/drop multiplexer for wavelength-division-multiplexing networks is presented. The device is realized in high-index-contrast silicon-oxynitride waveguide technology and is based on cascaded resonant coupler alters in the form of a mirrored binary tree.

  16. Comparison of multiplex real-time PCR and PCR-reverse blot hybridization assay for the direct and rapid detection of bacteria and antibiotic resistance determinants in positive culture bottles.

    Science.gov (United States)

    Wang, Hye-Young; Kim, Seoyong; Kim, Jungho; Park, Soon Deok; Kim, Hyo Youl; Uh, Young; Lee, Hyeyoung

    2016-09-01

    The aim of this study was to evaluate the performance of a commercially available multiplex real-time PCR assay and a PCR-reverse blot hybridization assay (PCR-REBA) for the rapid detection of bacteria and identification of antibiotic resistance genes directly from blood culture bottles and to compare the results of these molecular assays with conventional culture methods. The molecular diagnostic methods were used to evaluate 593 blood culture bottles from patients with bloodstream infections. The detection positivity of multiplex real-time PCR assay for Gram-positive bacteria, Gram-negative bacteria and Candida spp. was equivalent to PCR-REBA as 99.6 %, 99.1 % and 100 %, respectively. Using conventional bacterial cultures as the gold standard, the sensitivity, specificity, positive predictive value and negative predictive value of these two molecular methods were 99.5 % [95 % confidence interval (CI), 0.980-1.000; PPCR assay targeting the mecA gene to detect methicillin resistance was lower than that of the PCR-REBA method, detecting an overall positivity of 98.4 % (n=182; 95 % CI, 0.964-1.000; P<0.009) and 99.5 % (n=184; 95 % CI, 0.985-1.000; P<0.0001), respectively. The entire two methods take about 3 h, while results from culture can take up to 48-72 h. Therefore, the use of these two molecular methods was rapid and reliable for the characterization of causative pathogens in bloodstream infections.

  17. Effect of Exposure Type and Timing of Injuries in Division I College Football: A 4-year Single Program Analysis.

    Science.gov (United States)

    Krill, Michael K; Borchers, James R; Hoffman, Joshua T; Tatarski, Rachel L; Hewett, Timothy E

    2017-02-01

    Football players compete with a high risk of injury due to the sport. With the recent efforts to improve safety, the National Collegiate Athletic Association (NCAA) established new terminology to clearly define exposure types and reduce the number of high contact exposures. To compare football injury rates (IR) with a focus on game versus practice, time in season of injury, mechanism of injury and utilizing recent exposure types defined by the NCAA (live contact, full-pads and non-contact). Licensed medical professionals monitored a college football program regular season from 2012-2015. Each injury was classified by timing of the injury, mechanism of injury, and whether it occurred in game or practice. Player attendance and type of exposure (non-contact, full-pad or live contact, which involves live tackling to the ground and/or full-speed blocking and can occur in full-pad or half-pad ('shell') equipment) was documented. IR were calculated per 1000 athlete-exposures (AE). Mid-exact P tests compared rates between variables. The game IR was over three times as high as the practice IR (p injuries observed occurred from a contact mechanism (IR: 2.508/1000 AE). The highest IR during the fall football season occurred in the pre-season at 5.769/1000 AE. Overall IR observed in this cohort were lower than prior studies published before recent NCAA rule changes and guideline implementation to improve athlete safety. Athletes in this cohort were at significantly increased risk of injury from live contact exposures.

  18. The effects of object activity distribution on multiplexing multi-pinhole SPECT

    Energy Technology Data Exchange (ETDEWEB)

    Mok, Greta S P [Department of Electrical and Electronics Engineering, Faculty of Science and Technology, University of Macau, Taipa, Macau (China); Tsui, Benjamin M W [Division of Medical Imaging Physics, Department of Radiology, Johns Hopkins Medical Institutions, Baltimore, MD 21287 (United States); Beekman, Freek J, E-mail: gretamok@umac.m [Section Radiation Detection and Medical Imaging, Faculty of Applied Sciences, Delft University of Technology, 2629JB Delft (Netherlands)

    2011-04-21

    We aim to study the effects of activity distribution for multiplexing multi-pinhole (MPH) SPECT. Three digital phantoms, including a hot rod, a cold rod and a cold sphere phantom, were used. Different degrees of multiplexing were obtained by (i) adjusting the MPH pattern for the same 4-pinhole collimator (scheme 1) and (ii) increasing the number of pinholes (scheme 2). Noise-free and noisy projections were generated using a 3D analytical MPH projector based on the same acquisition time. Projections were reconstructed using OS-EM without resolution recovery. Normalized mean-square-error (NMSE), noise, image profiles and signal-to-background ratios (SBR) were assessed. For the hot rod phantom, the NMSE-noise trade-offs slightly improves for multiplexing designs in scheme 2. Substantial artifacts were observed and the NMSE-noise trade-offs slightly worsened for multiplexing designs for the cold phantoms. Resolutions slightly degraded for higher degrees of multiplexing ({approx}39-65%) for the cold rod phantom. For the cold sphere phantom, image profiles showed non-multiplexing designs better emulated the phantom, while {approx}20% multiplexing performs similarly as compared to non-multiplexing in SBR. Our results indicate that multiplexing can help for sparse objects but leads to a significant image degradation in non-sparse distributions. Since many tracers are not highly specific, and the gain of detection efficiency by allowing multiplexing is fairly offset by image degradations, multiplexing needs to be kept to a minimum for optimum MPH collimator designs.

  19. Multiplex versus multiple taxonomy of paraphilia: case example.

    Science.gov (United States)

    Lehne, Gregory K; Money, John

    2003-01-01

    Several different paraphilias are presently diagnosed in some individuals whereas a more parsimonious taxonomy would be that of one multiplex paraphilia. A multiplex paraphilia may be expressed by variations of content at different times in an individual's life or in different situations. The present case example shows the unfolding of a multiplex paraphilia over a lifetime. At age 7 the subject was dressed in public as a girl wearing a diaper as a humiliation for bed-wetting. This experience had 3 paraphilic components that were separately manifested at different times in his life: fetishistic transvestism, pedophilic incest, and infantilism. A multiplex paraphilia taxonomy may lead to improved identification of etiology, prognosis, and treatment of paraphilia.

  20. Electro-optical time gating based on Mach-Zehnder modulator for multiple access interference elimination in optical code-division multiple access networks

    Science.gov (United States)

    Chen, Yinfang; Wang, Rong; Fang, Tao; Pu, Tao; Xiang, Peng; Zheng, Jilin; Zhu, Huatao

    2014-05-01

    An electro-optical time gating technique, which is based on an electrical return-to-zero (RZ) pulse driven Mach-Zehnder modulator (MZM) for eliminating multiple access interference (MAI) in optical code-division multiple access (OCDMA) networks is proposed. This technique is successfully simulated in an eight-user two-dimensional wavelength-hopping time-spreading system, as well as in a three-user temporal phase encoding system. Results show that in both systems the MAI noise is efficiently removed and the average received power penalty improved. Both achieve error-free transmissions at a bit rate of 2.5 Gb/s. In addition, we also individually discuss effects of parameters in two systems, such as the extinction ratio of the MZM, the duty cycle of the driven RZ pulse, and the time misalignment between the driven pulse and the decoded autocorrelation peak, on the output bit error rate performance. Our work shows that employing a common MZM as a thresholder provides another probability and an interesting cost-effective choice for a smart size, low energy, and less complex thresholding technique for integrated detection in OCDMA networks.

  1. Dual phase multiplex polymerase chain reaction

    Science.gov (United States)

    Pemov, Alexander [Charlottesville, VA; Bavykin, Sergei [Darien, IL

    2008-10-07

    Highly specific and sensitive methods were developed for multiplex amplification of nucleic acids on supports such as microarrays. Based on a specific primer design, methods include five types of amplification that proceed in a reaction chamber simultaneously. These relate to four types of multiplex amplification of a target DNA on a solid support, directed by forward and reverse complex primers immobilized to the support and a fifth type--pseudo-monoplex polymerase chain reaction (PCR) of multiple targets in solution, directed by a single pair of unbound universal primers. The addition of the universal primers in the reaction mixture increases the yield over the traditional "bridge" amplification on a solid support by approximately ten times. Methods that provide multitarget amplification and detection of as little as 0.45-4.5.times.10.sup.-12 g (equivalent to 10.sup.2-10.sup.3 genomes) of a bacterial genomic DNA are disclosed.

  2. Multiplex families with epilepsy

    Science.gov (United States)

    Afawi, Zaid; Oliver, Karen L.; Kivity, Sara; Mazarib, Aziz; Blatt, Ilan; Neufeld, Miriam Y.; Helbig, Katherine L.; Goldberg-Stern, Hadassa; Misk, Adel J.; Straussberg, Rachel; Walid, Simri; Mahajnah, Muhammad; Lerman-Sagie, Tally; Ben-Zeev, Bruria; Kahana, Esther; Masalha, Rafik; Kramer, Uri; Ekstein, Dana; Shorer, Zamir; Wallace, Robyn H.; Mangelsdorf, Marie; MacPherson, James N.; Carvill, Gemma L.; Mefford, Heather C.; Jackson, Graeme D.; Scheffer, Ingrid E.; Bahlo, Melanie; Gecz, Jozef; Heron, Sarah E.; Corbett, Mark; Mulley, John C.; Dibbens, Leanne M.; Korczyn, Amos D.

    2016-01-01

    Objective: To analyze the clinical syndromes and inheritance patterns of multiplex families with epilepsy toward the ultimate aim of uncovering the underlying molecular genetic basis. Methods: Following the referral of families with 2 or more relatives with epilepsy, individuals were classified into epilepsy syndromes. Families were classified into syndromes where at least 2 family members had a specific diagnosis. Pedigrees were analyzed and molecular genetic studies were performed as appropriate. Results: A total of 211 families were ascertained over an 11-year period in Israel. A total of 169 were classified into broad familial epilepsy syndrome groups: 61 generalized, 22 focal, 24 febrile seizure syndromes, 33 special syndromes, and 29 mixed. A total of 42 families remained unclassified. Pathogenic variants were identified in 49/211 families (23%). The majority were found in established epilepsy genes (e.g., SCN1A, KCNQ2, CSTB), but in 11 families, this cohort contributed to the initial discovery (e.g., KCNT1, PCDH19, TBC1D24). We expand the phenotypic spectrum of established epilepsy genes by reporting a familial LAMC3 homozygous variant, where the predominant phenotype was epilepsy with myoclonic-atonic seizures, and a pathogenic SCN1A variant in a family where in 5 siblings the phenotype was broadly consistent with Dravet syndrome, a disorder that usually occurs sporadically. Conclusion: A total of 80% of families were successfully classified, with pathogenic variants identified in 23%. The successful characterization of familial electroclinical and inheritance patterns has highlighted the value of studying multiplex families and their contribution towards uncovering the genetic basis of the epilepsies. PMID:26802095

  3. On-chip single photon filtering and multiplexing in hybrid quantum photonic circuits.

    Science.gov (United States)

    Elshaari, Ali W; Zadeh, Iman Esmaeil; Fognini, Andreas; Reimer, Michael E; Dalacu, Dan; Poole, Philip J; Zwiller, Val; Jöns, Klaus D

    2017-08-30

    Quantum light plays a pivotal role in modern science and future photonic applications. Since the advent of integrated quantum nanophotonics different material platforms based on III-V nanostructures-, colour centers-, and nonlinear waveguides as on-chip light sources have been investigated. Each platform has unique advantages and limitations; however, all implementations face major challenges with filtering of individual quantum states, scalable integration, deterministic multiplexing of selected quantum emitters, and on-chip excitation suppression. Here we overcome all of these challenges with a hybrid and scalable approach, where single III-V quantum emitters are positioned and deterministically integrated in a complementary metal-oxide-semiconductor-compatible photonic circuit. We demonstrate reconfigurable on-chip single-photon filtering and wavelength division multiplexing with a foot print one million times smaller than similar table-top approaches, while offering excitation suppression of more than 95 dB and efficient routing of single photons over a bandwidth of 40 nm. Our work marks an important step to harvest quantum optical technologies' full potential.Combining different integration platforms on the same chip is currently one of the main challenges for quantum technologies. Here, Elshaari et al. show III-V Quantum Dots embedded in nanowires operating in a CMOS compatible circuit, with controlled on-chip filtering and tunable routing.

  4. Development of a multiplex real-time PCR for the rapid detection of the predominant beta-lactamase genes CTX-M, SHV, TEM and CIT-type AmpCs in Enterobacteriaceae.

    Directory of Open Access Journals (Sweden)

    Nicole Roschanski

    Full Text Available Beta-lactamase resistant bacteria and especially ESBL producing Enterobacteriaceae are an increasing problem worldwide. For this reason a major interest in efficient and reliable methods for rapid screening of high sample numbers is recognizable. Therefore, a multiplex real-time PCR was developed to detect the predominant class A beta-lactamase genes blaCTX-M, blaSHV, blaTEM and CIT-type AmpCs in a one-step reaction. A set of 114 Enterobacteriaceae containing previously identified resistance gene subtypes and in addition 20 undefined animal and environmental isolates were used for the validation of this assay. To confirm the accessibility in variable settings, the real-time runs were performed analogous in two different laboratories using different real-time cyclers. The obtained results showed complete accordance between the real-time data and the predetermined genotypes. Even if sequence analyses are further necessary for a comprehensive characterization, this method was proofed to be reliable for rapid screening of high sample numbers and therefore could be an important tool for e. g. epidemiological purposes or support infection control measures.

  5. Three-mode all-optical (de)multiplexing on a SOI chip

    Science.gov (United States)

    Le, Yan-Si; Wang, Zhi; Li, Zhi-Yong; Li, Ying; Li, Qiang; Cui, Can; Wu, Chong-Qing

    2018-01-01

    An on-chip three-mode division multiplexing circuit using a simple ADC-based TE0 & TE1 & TE2 (de)multiplexer is demonstrated to improve the link capacity of on-chip optical interconnects. The proposed (de)multiplexer does not contain any tapered waveguide which is different from the previous mode (de)multiplexer based on ADCs. Here, we choose multimode waveguide width first and then confirm corresponding width of the other two waveguides. Thus the bus waveguide without any tapers can not only reduce complexity of (de)multiplexer but also reduce difficulty of the fabrication. Our simulation results show that the hybrid multiplexer has relatively low loss and low crosstalk about -40 dB, -26.99 dB and -28.72 dB for each mode around 1550 nm with a width-variation w =± 25 nm. These properties make the proposed mode-(de)multiplexer suitable for application in high-capacity data transmission.

  6. An automated image analysis framework for segmentation and division plane detection of single live Staphylococcus aureus cells which can operate at millisecond sampling time scales using bespoke Slimfield microscopy

    Science.gov (United States)

    Wollman, Adam J. M.; Miller, Helen; Foster, Simon; Leake, Mark C.

    2016-10-01

    Staphylococcus aureus is an important pathogen, giving rise to antimicrobial resistance in cell strains such as Methicillin Resistant S. aureus (MRSA). Here we report an image analysis framework for automated detection and image segmentation of cells in S. aureus cell clusters, and explicit identification of their cell division planes. We use a new combination of several existing analytical tools of image analysis to detect cellular and subcellular morphological features relevant to cell division from millisecond time scale sampled images of live pathogens at a detection precision of single molecules. We demonstrate this approach using a fluorescent reporter GFP fused to the protein EzrA that localises to a mid-cell plane during division and is involved in regulation of cell size and division. This image analysis framework presents a valuable platform from which to study candidate new antimicrobials which target the cell division machinery, but may also have more general application in detecting morphologically complex structures of fluorescently labelled proteins present in clusters of other types of cells.

  7. Systematic optimization of multiplex zymography protocol to detect active cathepsins K, L, S, and V in healthy and diseased tissue: compromise among limits of detection, reduced time, and resources.

    Science.gov (United States)

    Dumas, Jerald E; Platt, Manu O

    2013-07-01

    Cysteine cathepsins are a family of proteases identified in cancer, atherosclerosis, osteoporosis, arthritis, and a number of other diseases. As this number continues to rise, so does the need for low cost, broad use quantitative assays to detect their activity and can be translated to the clinic in the hospital or in low resource settings. Multiplex cathepsin zymography is one such assay that detects subnanomolar levels of active cathepsins K, L, S, and V in cell or tissue preparations observed as clear bands of proteolytic activity after gelatin substrate SDS-PAGE with conditions optimal for cathepsin renaturing and activity. Densitometric analysis of the zymogram provides quantitative information from this low cost assay. After systematic modifications to optimize cathepsin zymography, we describe reduced electrophoresis time from 2 h to 10 min, incubation assay time from overnight to 4 h, and reduced minimal tissue protein necessary while maintaining sensitive detection limits; an evaluation of the pros and cons of each modification is also included. We further describe image acquisition by Smartphone camera, export to Matlab, and densitometric analysis code to quantify and report cathepsin activity, adding portability and replacing large scale, darkbox imaging equipment that could be cost prohibitive in limited resource settings.

  8. Systematic optimization of multiplex zymography protocol to detect active cathepsins K, L, S, and V in healthy and diseased tissue: compromise between limits of detection, reduced time, and resources

    Science.gov (United States)

    Dumas, Jerald E.; Platt, Manu O.

    2013-01-01

    Cysteine cathepsins are a family of proteases identified in cancer, atherosclerosis, osteoporosis, arthritis and a number of other diseases. As this number continues to rise, so does the need for low cost, broad use quantitative assays to detect their activity and can be translated to the clinic in the hospital or in low resource settings. Multiplex cathepsin zymography is one such assay that detects subnanomolar levels of active cathepsins K, L, S, and V in cell or tissue preparations observed as cleared bands of proteolytic activity after gelatin substrate SDS-PAGE with conditions optimal for cathepsin renaturing and activity. Densitometric analysis of the zymogram provides quantitative information from this low cost assay. After systematic modifications to optimize cathepsin zymography, we describe reduced electrophoresis time from 2 hours to 10 minutes, incubation assay time from overnight to 4 hours, and reduced minimal tissue protein necessary while maintaining sensitive detection limits; an evaluation of the pros and cons of each modification is also included. We further describe image acquisition by smartphone camera, export to Matlab, and densitometric analysis code to quantify and report cathepsin activity, adding portability and replacing large scale, darkbox imaging equipment that could be cost prohibitive in limited resource settings. PMID:23532386

  9. Performance of asynchronous fiber-optic code division multiple access system based on three-dimensional wavelength/time/space codes and its link analysis.

    Science.gov (United States)

    Singh, Jaswinder

    2010-03-10

    A novel family of three-dimensional (3-D) wavelength/time/space codes for asynchronous optical code-division-multiple-access (CDMA) systems with "zero" off-peak autocorrelation and "unity" cross correlation is reported. Antipodal signaling and differential detection is employed in the system. A maximum of [(W x T+1) x W] codes are generated for unity cross correlation, where W and T are the number of wavelengths and time chips used in the code and are prime. The conditions for violation of the cross-correlation constraint are discussed. The expressions for number of generated codes are determined for various code dimensions. It is found that the maximum number of codes are generated for S systems. The codes have a code-set-size to code-size ratio greater than W/S. For instance, with a code size of 2065 (59 x 7 x 5), a total of 12,213 users can be supported, and 130 simultaneous users at a bit-error rate (BER) of 10(-9). An arrayed-waveguide-grating-based reconfigurable encoder/decoder design for 2-D implementation for the 3-D codes is presented so that the need for multiple star couplers and fiber ribbons is eliminated. The hardware requirements of the coders used for various modulation/detection schemes are given. The effect of insertion loss in the coders is shown to be significantly reduced with loss compensation by using an amplifier after encoding. An optical CDMA system for four users is simulated and the results presented show the improvement in performance with the use of loss compensation.

  10. Evaluation of multiplex real-time PCR for detection of Haemophilus ducreyi, Treponema pallidum, herpes simplex virus type 1 and 2 in the diagnosis of genital ulcer disease in the Rakai District, Uganda

    Science.gov (United States)

    Suntoke, T R; Hardick, A; Tobian, A A R; Mpoza, B; Laeyendecker, O; Serwadda, D; Opendi, P; Gaydos, C A; Gray, R H; Wawer, M J; Quinn, T C; Reynolds, S J

    2009-01-01

    Objective: To develop a real-time PCR assay that reliably and accurately detects the predominant sexually transmitted aetiological agents of genital ulcer disease (GUD) (Haemophilus ducreyi, Treponema pallidum and herpes simplex virus type 1 (HSV-1) and type 2 (HSV-2)) and to assess the use of real-time PCR diagnostic testing in a rural African field site. Methods: Two multiplex real-time PCR reactions were used to detect H ducreyi/and HSV-1/HSV-2 in ulcer swabs from 100 people with symptomatic genital ulcers in rural Rakai, Uganda. Results were compared with syphilis, HSV-1 and HSV-2 serology. Results: Of 100 GUD samples analysed from 43 HIV positive and 57 HIV negative individuals, 71% were positive for one or more sexually transmitted infection (STI) pathogens by real-time PCR (61% for HSV-2, 5% for T pallidum, 3% for HSV-1, 1% for H ducreyi and 1% for dual H ducreyi/HSV-2). The frequency of HSV in genital ulcers was 56% (32/57) in HIV negative individuals and 77% (33/43) in HIV positive individuals (p=0.037). Assay reproducibility was evaluated by repeat PCR testing in the USA with 96% agreement (κ=0.85). Conclusions: STI pathogens were detected in the majority of GUD swab samples from symptomatic patients in Rakai, Uganda, by real-time PCR. HSV-2 was the predominant cause of genital ulcers. Real-time PCR technology can provide sensitive, rapid and reproducible evaluation of GUD aetiology in a resource-limited setting. PMID:19066198

  11. Recent advances in high-capacity free-space optical and radio-frequency communications using orbital angular momentum multiplexing

    Science.gov (United States)

    Ren, Yongxiong; Xie, Guodong; Yan, Yan; Li, Long; Zhao, Zhe; Wang, Jian; Tur, Moshe; Molisch, Andreas F.; Ashrafi, Solyman

    2017-01-01

    There is a continuing growth in the demand for data bandwidth, and the multiplexing of multiple independent data streams has the potential to provide the needed data capacity. One technique uses the spatial domain of an electromagnetic (EM) wave, and space division multiplexing (SDM) has become increasingly important for increased transmission capacity and spectral efficiency of a communication system. A subset of SDM is mode division multiplexing (MDM), in which multiple orthogonal beams each on a different mode can be multiplexed. A potential modal basis set to achieve MDM is to use orbital angular momentum (OAM) of EM waves. In such a system, multiple OAM beams each carrying an independent data stream are multiplexed at the transmitter, propagate through a common medium and are demultiplexed at the receiver. As a result, the total capacity and spectral efficiency of the communication system can be multiplied by a factor equal to the number of transmitted OAM modes. Over the past few years, progress has been made in understanding the advantages and limitations of using multiplexed OAM beams for communication systems. In this review paper, we highlight recent advances in the use of OAM multiplexing for high-capacity free-space optical and millimetre-wave communications. We discuss different technical challenges (e.g. atmospheric turbulence and crosstalk) as well as potential techniques to mitigate such degrading effects. This article is part of the themed issue ‘Optical orbital angular momentum’. PMID:28069770

  12. Validation and utilization of an internally controlled multiplex Real-time RT-PCR assay for simultaneous detection of enteroviruses and enterovirus A71 associated with hand foot and mouth disease.

    Science.gov (United States)

    Thanh, Tran Tan; Anh, Nguyen To; Tham, Nguyen Thi; Van, Hoang Minh Tu; Sabanathan, Saraswathy; Qui, Phan Tu; Ngan, Tran Thuy; Van, Tran Thi My; Nguyet, Lam Anh; Ny, Nguyen Thi Han; Thanh, Le Thi My; Chai, Ong Kien; Perera, David; Viet, Do Chau; Khanh, Truong Huu; Ha, Do Quang; Tuan, Ha Manh; Wong, Kum Thong; Hung, Nguyen Thanh; Chau, Nguyen Van Vinh; Thwaites, Guy; van Doorn, H Rogier; Van Tan, Le

    2015-06-09

    Hand foot and mouth disease (HFMD) is a disease of public health importance across the Asia-Pacific region. The disease is caused by enteroviruses (EVs), in particular enterovirus A71 (EV-A71). In EV-A71-associated HFMD, the infection is sometimes associated with severe manifestations including neurological involvement and fatal outcome. The availability of a robust diagnostic assay to distinguish EV-A71 from other EVs is important for patient management and outbreak response. We developed and validated an internally controlled one-step single-tube real-time RT-PCR in terms of sensitivity, linearity, precision, and specificity for simultaneous detection of EVs and EV-A71. Subsequently, the assay was then applied on throat and rectal swabs sampled from 434 HFMD patients. The assay was evaluated using both plasmid DNA and viral RNA and has shown to be reproducible with a maximum assay variation of 4.41 % and sensitive with a limit of detection less than 10 copies of target template per reaction, while cross-reactivity with other EV serotypes was not observed. When compared against a published VP1 nested RT-PCR using 112 diagnostic throat and rectal swabs from 112 children with a clinical diagnosis of HFMD during 2014, the multiplex assay had a higher sensitivity and 100 % concordance with sequencing results which showed EVs in 77/112 (68.8 %) and EV-A71 in 7/112 (6.3 %). When applied to clinical diagnostics for 322 children, the assay detected EVs in throat swabs of 257/322 (79.8 %) of which EV-A71 was detected in 36/322 (11.2 %) children. The detection rate increased to 93.5 % (301/322) and 13.4 % (43/322) for EVs and EV-A71, respectively, when rectal swabs from 65 throat-negative children were further analyzed. We have successfully developed and validated a sensitive internally controlled multiplex assay for rapid detection of EVs and EV-A71, which is useful for clinical management and outbreak control of HFMD.

  13. New multiplexes for Europe-amendments and clarification of strategic development

    DEFF Research Database (Denmark)

    Gill, Peter; Fereday, Lyn; Morling, Niels

    2006-01-01

    is important to improve the power of national DNA databases. Subsequent discussions have occurred with manufacturers and members of the ENFSI/EDNAP groups. Because significant time and investment is required to develop new multiplexes of 13+ STR loci, manufacturers indicated that it would be preferable...... to adopt a staged approach. Two differing, but parallel strategies have now emerged. The first strategy employs a 13 STR loci multiplex incorporating three mini-STRs into the current multiplex test. The second strategy employs a multiplex of six high molecular weight STRs (in current use), modified...

  14. Bond Percolation on Multiplex Networks

    Science.gov (United States)

    Hackett, A.; Cellai, D.; Gómez, S.; Arenas, A.; Gleeson, J. P.

    2016-04-01

    We present an analytical approach for bond percolation on multiplex networks and use it to determine the expected size of the giant connected component and the value of the critical bond occupation probability in these networks. We advocate the relevance of these tools to the modeling of multilayer robustness and contribute to the debate on whether any benefit is to be yielded from studying a full multiplex structure as opposed to its monoplex projection, especially in the seemingly irrelevant case of a bond occupation probability that does not depend on the layer. Although we find that in many cases the predictions of our theory for multiplex networks coincide with previously derived results for monoplex networks, we also uncover the remarkable result that for a certain class of multiplex networks, well described by our theory, new critical phenomena occur as multiple percolation phase transitions are present. We provide an instance of this phenomenon in a multiplex network constructed from London rail and European air transportation data sets.

  15. Improvement and optimization of a multiplex real-time reverse transcription polymerase chain reaction assay for the detection and typing of Vesicular stomatitis virus.

    Science.gov (United States)

    Hole, Kate; Velazquez-Salinas, Lauro; Velazques-Salinas, Lauro; Clavijo, Alfonso

    2010-05-01

    An improvement to a previously reported real-time reverse transcription polymerase chain reaction (real-time RT-PCR) assay for the detection of Vesicular stomatitis virus (VSV) is described. Results indicate that the new assay is capable of detecting a panel of genetically representative strains of VSV present in North, Central, and South America. The assay is specific for VSV and allows for simultaneous differentiation between Vesicular stomatitis Indiana virus and Vesicular stomatitis New Jersey virus. This real-time RT-PCR is able to detect current circulating strains of VSV and can be used for rapid diagnosis of VSV and differentiation of VSV from other vesicular diseases, such as foot-and-mouth disease.

  16. Nuclear Power Division

    International Nuclear Information System (INIS)

    Anon.

    1981-01-01

    The 1981-85 research program planned by the Nuclear Power Division of EPRI places major emphasis on the assurance of safety and realiability of light water reactors (LWRs). Of high priority is a better knowledge of LWR-system behavior undeer abnormal conditions and the behavior of structural materials used for pressure vessels, piping, and large nuclear-plant components. Strong emphasis is also placed on achieving the most-effective performance and utilization of nuclear fuels and improving the corrosion resistance of pressurized-water-reactor steam generators. Efforts are underway to reduce radiation exposure and outage duration and to investigate the human factors involved in plant operation and maintenance. Substantial emphasis is placed on short-range goals designed to achieve useful results in the next two to seven years. The Division's mid- and long-range goal is to improve the use of fissionable and fertile materials and aid in the realization of other reactor systems. A series of general goals, categorized into three time frames and planned expenditures shows the trend of work to be undertaken. 53 figures

  17. Helicity multiplexed broadband metasurface holograms

    Science.gov (United States)

    Wen, Dandan; Yue, Fuyong; Li, Guixin; Zheng, Guoxing; Chan, Kinlong; Chen, Shumei; Chen, Ming; Li, King Fai; Wong, Polis Wing Han; Cheah, Kok Wai; Yue Bun Pun, Edwin; Zhang, Shuang; Chen, Xianzhong

    2015-09-01

    Metasurfaces are engineered interfaces that contain a thin layer of plasmonic or dielectric nanostructures capable of manipulating light in a desirable manner. Advances in metasurfaces have led to various practical applications ranging from lensing to holography. Metasurface holograms that can be switched by the polarization state of incident light have been demonstrated for achieving polarization multiplexed functionalities. However, practical application of these devices has been limited by their capability for achieving high efficiency and high image quality. Here we experimentally demonstrate a helicity multiplexed metasurface hologram with high efficiency and good image fidelity over a broad range of frequencies. The metasurface hologram features the combination of two sets of hologram patterns operating with opposite incident helicities. Two symmetrically distributed off-axis images are interchangeable by controlling the helicity of the input light. The demonstrated helicity multiplexed metasurface hologram with its high performance opens avenues for future applications with functionality switchable optical devices.

  18. Laguerre Gaussian beam multiplexing through turbulence

    CSIR Research Space (South Africa)

    Trichili, A

    2014-08-17

    Full Text Available We analyze the effect of atmospheric turbulence on the propagation of multiplexed Laguerre Gaussian modes. We present a method to multiplex Laguerre Gaussian modes using digital holograms and decompose the resulting field after encountering a...

  19. Microwave SQUID multiplexing of large MMC detector arrays

    Energy Technology Data Exchange (ETDEWEB)

    Keller, M.; Wegner, M.; Kempf, S.; Gastaldo, L.; Fleischmann, A.; Enss, C. [Kirchhoff-Institute for Physics, Heidelberg University (Germany)

    2016-07-01

    Metallic magnetic calorimeters (MMCs) are the devices of choice for many spectroscopic applications since they provide a very good energy resolution, a very fast intrinsic signal rise time as well as an excellent linearity. While single MMCs or small detector arrays are typically read out by dc-SQUIDs, the readout of very large arrays requires a cryogenic multiplexing technique to limit the parasitic heat load to the cold stage of the cryostat, the system complexity as well as cost. A very promising approach for the readout of very large MMC arrays is microwave SQUID multiplexing. Here, the initial detector signal is transduced into a resonance frequency shift of a related superconducting λ/4 microwave resonator by means of a non-hysteretic, unshunted rf-SQUID. By coupling many resonators - each with unique resonance frequency - to a common transmission line, this frequency domain multiplexing technique allows for the readout of hundreds or thousand pixels with only one HEMT amplifier and two coaxial cables. In this contribution we discuss the performance of a recently developed 64 pixel MMC detector array that is read out by means of an on-chip multiplexer. For the very first time we demonstrate the simultaneous readout of two MMCs by means of a microwave SQUID multiplexer.

  20. Adaptive Multicarrier Modulation: A Convenient Framework for Time-Frequency Processing in Wireless Communications

    OpenAIRE

    Keller, T.; Hanzo, L.

    2000-01-01

    A historical perspective of orthogonal frequency-division multiplexing (OFDM) is given with reference to its literature. Its advantages and disadvantages are reviewed, and its performance is characterized over highly dispersive channels. The effects of both time- and frequency-domain synchronization errors are quantified, and a range of solutions proposed in the recent literature are re-viewed. One of the main objectives of this review is to highlight the recent thinking behind adaptive bit a...

  1. Joint accurate time and stable frequency distribution infrastructure sharing fiber footprint with research network

    Czech Academy of Sciences Publication Activity Database

    Vojtěch, J.; Šlapák, M.; Škoda, P.; Radil, J.; Havliš, O.; Altmann, M.; Münster, P.; Velč, R.; Kundrát, J.; Altmannová, L.; Vohnout, R.; Horváth, T.; Hůla, M.; Smotlacha, V.; Čížek, Martin; Pravdová, Lenka; Řeřucha, Šimon; Hrabina, Jan; Číp, Ondřej

    2017-01-01

    Roč. 56, č. 2 (2017), s. 1-7, č. článku 027101. ISSN 0091-3286 R&D Projects: GA ČR GB14-36681G Institutional support: RVO:68081731 Keywords : accurate time * stable frequency * wavelength division multiplexing * bidirectional reciprocal path * Sagnac effect Subject RIV: BH - Optics, Masers, Lasers OBOR OECD: Optics (including laser optics and quantum optics) Impact factor: 1.082, year: 2016

  2. Molecular differentiation of Treponema pallidum subspecies in skin ulceration clinically suspected as yaws in Vanuatu using real-time multiplex PCR and serological methods.

    Science.gov (United States)

    Chi, Kai-Hua; Danavall, Damien; Taleo, Fasihah; Pillay, Allan; Ye, Tun; Nachamkin, Eli; Kool, Jacob L; Fegan, David; Asiedu, Kingsley; Vestergaard, Lasse S; Ballard, Ronald C; Chen, Cheng-Yen

    2015-01-01

    We developed a TaqMan-based real-time quadriplex polymerase chain reaction (PCR) to simultaneously detect Treponema pallidum subspecies pallidum, T. pallidum subsp. pertenue, and T. pallidum subsp. endemicum, the causative agents of venereal syphilis, yaws, and bejel, respectively. The PCR assay was applied to samples from skin ulcerations of clinically presumptive yaws cases among children on Tanna Island, Vanuatu. Another real-time triplex PCR was used to screen for the point mutations in the 23S rRNA genes that have previously been associated with azithromycin resistance in T. pallidum subsp. pallidum strains. Seropositivity by the classical syphilis serological tests was 35.5% among children with skin ulcerations clinically suspected with yaws, whereas the presence of T. pallidum subsp. pertenue DNA was only found in lesions from 15.5% of children. No evidence of T. pallidum subsp. pertenue infection, by either PCR or serology was found in ∼59% of cases indicating alternative causes of yaws-like lesions in this endemic area. © The American Society of Tropical Medicine and Hygiene.

  3. Spatial analysis of various multiplex cinema types

    Directory of Open Access Journals (Sweden)

    Young-Seo Park

    2016-03-01

    Full Text Available This study identifies the spatial characteristics and relationships of each used space according to the multiplex type. In this study, multiplexes are classified according to screen rooms and circulation systems, and each used space is quantitatively analyzed. The multiplex type based on screen rooms and moving line systems influences the relationship and characteristics of each used space in various ways. In particular, the structure of the used space of multiplexes has a significant effect on profit generation and audience convenience.

  4. Demand-driven scheduling of movies in a multiplex

    NARCIS (Netherlands)

    J. Eliashberg (Jehoshua); Q. Hegie (Quintus); J. Ho (Jason); D. Huisman (Dennis); S.J. Miller (Steven); S. Swami (Sanjeev); C.B. Weinberg (Charles); B. Wierenga (Berend)

    2007-01-01

    textabstractThis paper describes a model that generates weekly movie schedules in a multiplex movie theater. A movie schedule specifies within each day of the week, on which screen(s) different movies will be played, and at which time(s). The model consists of two parts: (i) conditional forecasts of

  5. Demand-Driven Scheduling of Movies in a Multiplex

    NARCIS (Netherlands)

    J. Eliashberg (Jehoshua); Q. Hegie (Quintus); J. Ho (Jason); D. Huisman (Dennis); S.J. Miller (Steven); S. Swami (Sanjeev); C.B. Weinberg (Charles); B. Wierenga (Berend)

    2007-01-01

    textabstractThis paper describes a model that generates weekly movie schedules in a multiplex movie theater. A movie schedule specifies within each day of the week, on which screen(s) different movies will be played, and at which time(s). The model consists of two parts: (i) conditional forecasts of

  6. MULTIPLEX SYBR® GREEN-REAL TIME PCR (qPCR ASSAY FOR THE DETECTION AND DIFFERENTIATION OF Bartonella henselae AND Bartonella clarridgeiae IN CATS

    Directory of Open Access Journals (Sweden)

    Rodrigo Staggemeier

    2014-04-01

    Full Text Available A novel SYBR® green-real time polymerase chain reaction (qPCR was developed to detect two Bartonella species, B. henselae and B. clarridgeiae, directly from blood samples. The test was used in blood samples obtained from cats living in animal shelters in Southern Brazil. Results were compared with those obtained by conventional PCR targeting Bartonella spp. Among the 47 samples analyzed, eight were positive using the conventional PCR and 12 were positive using qPCR. Importantly, the new qPCR detected the presence of both B. henselae and B. clarridgeiae in two samples. The results show that the qPCR described here may be a reliable tool for the screening and differentiation of two important Bartonella species.

  7. A Multiplex Real-Time PCR Assay to Diagnose and Separate Helicoverpa armigera and H. zea (Lepidoptera: Noctuidae in the New World.

    Directory of Open Access Journals (Sweden)

    Todd M Gilligan

    Full Text Available The Old World bollworm, Helicoverpa armigera (Hübner, and the corn earworm, H. zea (Boddie, are two of the most important agricultural pests in the world. Diagnosing these two species is difficult-adults can only be separated with a complex dissection, and larvae cannot be identified to species using morphology, necessitating the use of geographic origin for identification in most instances. With the discovery of H. armigera in the New World, identification of immature Helicoverpa based on origin is no longer possible because H. zea also occurs in all of the geographic regions where H. armigera has been discovered. DNA barcoding and restriction fragment length polymorphism (RFLP analyses have been reported in publications to distinguish these species, but these methods both require post-PCR processing (i.e., DNA sequencing or restriction digestion to complete. We report the first real-time PCR assay to distinguish these pests based on two hydrolysis probes that bind to a segment of the internal transcribed spacer region 2 (ITS2 amplified using a single primer pair. One probe targets H. armigera, the second probe targets H. zea, and a third probe that targets a conserved segment of 18S rDNA is used as a control of DNA quality. The assay can be completed in 50 minutes when using isolated DNA and is successfully tested on larvae intercepted at ports of entry and adults captured during domestic surveys. We demonstrate that the assay can be run in triplex with no negative effects on sensitivity, can be run using alternative real-time PCR reagents and instruments, and does not cross react with other New World Heliothinae.

  8. Rapid detection and specific differentiation of Salmonella enterica subsp. enterica Enteritidis, Typhimurium and its monophasic variant 4,[5],12:i:- by real-time multiplex PCR.

    Science.gov (United States)

    Maurischat, Sven; Baumann, Beatrice; Martin, Annett; Malorny, Burkhard

    2015-01-16

    Salmonella enterica is one of the most common zoonotic pathogens worldwide causing clinical diseases in human and animal hosts. Targeting a reduction of Salmonella prevalence in poultry, the EU set up a microbiological criterion that demands the absence of S. enterica subsp. enterica serovars Enteritidis and Typhimurium including its monophasic variant with seroformula 4,[5],12:i:- in 25 g of poultry neck skin samples and fresh meat according to regulation (EU) no 1086/2011. We developed and in-house validated a method that detects and differentiates these Salmonella serovars based on a 5-plex real-time PCR assay within 24 h after sampling. The inclusivity and exclusivity were between 98 and 99% analysing 456 bacterial strains. Validation according to ISO 16140:2003 against the traditional cultural reference method ISO 6579:2002 was performed using 60 artificially contaminated and 31 presumably naturally contaminated chicken neck skin samples resulting in a relative accuracy of 100%. The detection probability reached 100% between 3 and 5 CFU/25 g sample. We were also able to assign rough and non-motile strains to S. enterica subsp. enterica serovars Enteritidis and Typhimurium. In conclusion, we provide diagnostic laboratories a fast and accurate method to monitor these Salmonella serovars in chicken neck skin samples. Other matrices could be easily adapted. Copyright © 2014 Elsevier B.V. All rights reserved.

  9. Validation of a norovirus multiplex real-time RT-PCR assay for the detection of norovirus GI and GII from faeces samples.

    LENUS (Irish Health Repository)

    Jones, S

    2011-01-01

    Norovirus is a leading cause of infectious non-bacterial gastroenteritis. The virus is highly contagious and has multiple modes of transmission, presenting a growing challenge to hospital-based healthcare. In this study, a total of 120 stool samples are tested for the presence of norovirus GI and GII by the Roche two-step Lightcycler 2.0 assay incorporating primers and probes produced by TIB Molbiol, and the results are compared with results from the National Virus Reference Laboratory. The Roche\\/TIB Molbiol assay produced 51 positive results and 69 negative results. Discrepancy analysis was performed for six conflicting results using a second real-time polymerase chain reaction (PCR) assay (Roche\\/TIB Molbiol) and this confirmed that four of the five discrepant positive results were true positives. A single discrepant negative result generated by the Roche assay remained negative using the second assay. Sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV) were calculated to be 98%, 98.6%, 98.0% and 98.6%, respectively. Melting curve analysis was used to differentiate genogroups I and II and this showed that 92% of strains belonged to genogroup II.

  10. Frequency of Pathogenic Paediatric Bacterial Meningitis in Mozambique: The Critical Role of Multiplex Real-Time Polymerase Chain Reaction to Estimate the Burden of Disease

    Science.gov (United States)

    Nhantumbo, Aquino Albino; Cantarelli, Vlademir Vicente; Caireão, Juliana; Munguambe, Alcides Moniz; Comé, Charlotte Elizabeth; Pinto, Gabriela do Carmo; Zimba, Tomás Francisco; Mandomando, Inácio; Semá, Cynthia Baltazar; Dias, Cícero; Moraes, Milton Ozório; Gudo, Eduardo Samo

    2015-01-01

    Background In Sub-Saharan Africa, including Mozambique, acute bacterial meningitis (ABM) represents a main cause of childhood mortality. The burden of ABM is seriously underestimated because of the poor performance of culture sampling, the primary method of ABM surveillance in the region. Low quality cerebrospinal fluid (CSF) samples and frequent consumption of antibiotics prior to sample collection lead to a high rate of false-negative results. To our knowledge, this study is the first to determine the frequency of ABM in Mozambique using real-time polymerase chain reaction (qPCR) and to compare results to those of culture sampling. Method Between March 2013 and March 2014, CSF samples were collected at 3 regional hospitals from patients under 5 years of age, who met World Health Organization case definition criteria for ABM. Macroscopic examination, cytochemical study, culture, and qPCR were performed on all samples. Results A total of 369 CSF samples were collected from children clinically suspected of ABM. qPCR showed a significantly higher detection rate of ABM-causing pathogens when compared to culture (52.3% [193/369] versus 7.3% [27/369], p = 0.000). The frequency of Streptococcus pneumoniae, Haemophilus influenzae, group B Streptococci, and Neisseria meningitidis were 32.8% (121⁄369), 12.2%, (45⁄369), 3.0% (16⁄369) and 4.3% (11⁄369), respectively, significantly higher compared to that obtained on culture (p qPCR. The common use of culture rather than qPCR to identify ABM results in serious underestimation of the burden of the disease, and our findings strongly suggest that qPCR should be incorporated into surveillance activities for ABM. In addition, our data showed that S. pneumoniae represents the most common cause of ABM in children under 5 years of age. PMID:26393933

  11. Application of Multiplex PCR Coupled with Matrix-Assisted Laser Desorption Ionization-Time of Flight Analysis for Simultaneous Detection of 21 Common Respiratory Viruses.

    Science.gov (United States)

    Zhang, Chi; Xiao, Yan; Du, Jiang; Ren, Lili; Wang, Jianwei; Peng, Junping; Jin, Qi

    2015-08-01

    Respiratory infections continue to pose a significant threat to human health. It is important to accurately and rapidly detect respiratory viruses. To compensate for the limits of current respiratory virus detection methods, we developed a 24-plex analysis (common respiratory virus-mass spectrometry [CRV-MS]) that can simultaneously detect and identify 21 common respiratory viruses based on a matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry system. To evaluate the efficacy of the CRV-MS method, we used 102 samples that were confirmed positive for these common respiratory viruses. All tests using the CRV-MS method were effective, with no cross-reactivity observed with other common respiratory viruses. To confirm the usefulness of the CRV-MS method, we screened 336 nasal and throat swabs that were collected from adults or children with suspected viral acute respiratory tract infections using the CRV-MS method and consensus PCR/reverse transcription-PCR (RT-PCR) methods. Excluding four RNase P-negative samples, the CRV-MS and consensus PCR/RT-PCR methods detected respiratory viruses in 92.5% (307/332) and 89.5% (297/332) of the samples, respectively. The two methods yielded identical results for 306 (92.2%) samples, including negative results for 25 samples (7.5%) and positive results for 281 samples (84.6%). Differences between the two methods may reflect their different sensitivities. The CRV-MS method proved to be sensitive and robust, and it can be used in large-scale epidemiological studies of common respiratory virus infections. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

  12. Multiplexed Western Blotting Using Microchip Electrophoresis.

    Science.gov (United States)

    Jin, Shi; Furtaw, Michael D; Chen, Huaxian; Lamb, Don T; Ferguson, Stephen A; Arvin, Natalie E; Dawod, Mohamed; Kennedy, Robert T

    2016-07-05

    Western blotting is a commonly used protein assay that combines the selectivity of electrophoretic separation and immunoassay. The technique is limited by long time, manual operation with mediocre reproducibility, and large sample consumption, typically 10-20 μg per assay. Western blots are also usually used to measure only one protein per assay with an additional housekeeping protein for normalization. Measurement of multiple proteins is possible; however, it requires stripping membranes of antibody and then reprobing with a second antibody. Miniaturized alternatives to Western blot based on microfluidic or capillary electrophoresis have been developed that enable higher-throughput, automation, and greater mass sensitivity. In one approach, proteins are separated by electrophoresis on a microchip that is dragged along a polyvinylidene fluoride membrane so that as proteins exit the chip they are captured on the membrane for immunoassay. In this work, we improve this method to allow multiplexed protein detection. Multiple injections made from the same sample can be deposited in separate tracks so that each is probed with a different antibody. To further enhance multiplexing capability, the electrophoresis channel dimensions were optimized for resolution while keeping separation and blotting times to less than 8 min. Using a 15 μm deep × 50 μm wide × 8.6 cm long channel, it is possible to achieve baseline resolution of proteins that differ by 5% in molecular weight, e.g., ERK1 (44 kDa) from ERK2 (42 kDa). This resolution allows similar proteins detected by cross-reactive antibodies in a single track. We demonstrate detection of 11 proteins from 9 injections from a single Jurkat cell lysate sample consisting of 400 ng of total protein using this procedure. Thus, multiplexed Western blots are possible without cumbersome stripping and reprobing steps.

  13. Super-multiplex vibrational imaging

    Science.gov (United States)

    Wei, Lu; Chen, Zhixing; Shi, Lixue; Long, Rong; Anzalone, Andrew V.; Zhang, Luyuan; Hu, Fanghao; Yuste, Rafael; Cornish, Virginia W.; Min, Wei

    2017-04-01

    The ability to visualize directly a large number of distinct molecular species inside cells is increasingly essential for understanding complex systems and processes. Even though existing methods have successfully been used to explore structure-function relationships in nervous systems, to profile RNA in situ, to reveal the heterogeneity of tumour microenvironments and to study dynamic macromolecular assembly, it remains challenging to image many species with high selectivity and sensitivity under biological conditions. For instance, fluorescence microscopy faces a ‘colour barrier’, owing to the intrinsically broad (about 1,500 inverse centimetres) and featureless nature of fluorescence spectra that limits the number of resolvable colours to two to five (or seven to nine if using complicated instrumentation and analysis). Spontaneous Raman microscopy probes vibrational transitions with much narrower resonances (peak width of about 10 inverse centimetres) and so does not suffer from this problem, but weak signals make many bio-imaging applications impossible. Although surface-enhanced Raman scattering offers high sensitivity and multiplicity, it cannot be readily used to image specific molecular targets quantitatively inside live cells. Here we use stimulated Raman scattering under electronic pre-resonance conditions to image target molecules inside living cells with very high vibrational selectivity and sensitivity (down to 250 nanomolar with a time constant of 1 millisecond). We create a palette of triple-bond-conjugated near-infrared dyes that each displays a single peak in the cell-silent Raman spectral window; when combined with available fluorescent probes, this palette provides 24 resolvable colours, with the potential for further expansion. Proof-of-principle experiments on neuronal co-cultures and brain tissues reveal cell-type-dependent heterogeneities in DNA and protein metabolism under physiological and pathological conditions, underscoring the

  14. A Time-predictable Memory Network-on-Chip

    DEFF Research Database (Denmark)

    Schoeberl, Martin; Chong, David VH; Puffitsch, Wolfgang

    2014-01-01

    To derive safe bounds on worst-case execution times (WCETs), all components of a computer system need to be time-predictable: the processor pipeline, the caches, the memory controller, and memory arbitration on a multicore processor. This paper presents a solution for time-predictable memory...... arbitration and access for chip-multiprocessors. The memory network-on-chip is organized as a tree with time-division multiplexing (TDM) of accesses to the shared memory. The TDM based arbitration completely decouples processor cores and allows WCET analysis of the memory accesses on individual cores without...

  15. Detection of African swine fever, classical swine fever, and foot-and-mouth disease viruses in swine oral fluids by multiplex reverse transcription real-time polymerase chain reaction.

    Science.gov (United States)

    Grau, Frederic R; Schroeder, Megan E; Mulhern, Erin L; McIntosh, Michael T; Bounpheng, Mangkey A

    2015-03-01

    African swine fever (ASF), classical swine fever (CSF), and foot-and-mouth disease (FMD) are highly contagious animal diseases of significant economic importance. Pigs infected with ASF and CSF viruses (ASFV and CSFV) develop clinical signs that may be indistinguishable from other diseases. Likewise, various causes of vesicular disease can mimic clinical signs caused by the FMD virus (FMDV). Early detection is critical to limiting the impact and spread of these disease outbreaks, and the ability to perform herd-level surveillance for all 3 diseases rapidly and cost effectively using a single diagnostic sample and test is highly desirable. This study assessed the feasibility of simultaneous ASFV, CSFV, and FMDV detection by multiplex reverse transcription real-time polymerase chain reaction (mRT-qPCR) in swine oral fluids collected through the use of chewing ropes. Animal groups were experimentally infected independently with each virus, observed for clinical signs, and oral fluids collected and tested throughout the course of infection. All animal groups chewed on the ropes readily before and after onset of clinical signs and before onset of lameness or serious clinical signs. ASFV was detected as early as 3 days postinoculation (dpi), 2-3 days before onset of clinical disease; CSFV was detected at 5 dpi, coincident with onset of clinical disease; and FMDV was detected as early as 1 dpi, 1 day before the onset of clinical disease. Equivalent results were observed in 4 independent studies and demonstrate the feasibility of oral fluids and mRT-qPCR for surveillance of ASF, CSF, and FMD in swine populations. © 2015 The Author(s).

  16. Division of atomic physics

    International Nuclear Information System (INIS)

    Kroell, S.

    1994-01-01

    The Division of Atomic Physics, Lund Institute of Technology (LTH), is responsible for the basic physics teaching in all subjects at LTH and for specialized teaching in Optics, Atomic Physics, Atomic and Molecular Spectroscopy and Laser Physics. The Division has research activities in basic and applied optical spectroscopy, to a large extent based on lasers. It is also part of the Physics Department, Lund University, where it forms one of eight divisions. Since the beginning of 1980 the research activities of our division have been centred around the use of lasers. The activities during the period 1991-1992 is described in this progress reports

  17. A new multiplex real-time TaqMan® PCR for quantification of Mycoplasma hyopneumoniae, M. hyorhinis and M. flocculare: Exploratory epidemiological investigations to research mycoplasmal association in enzootic pneumonia-like lesions in slaughtered pigs.

    Science.gov (United States)

    Fourour, Sarah; Fablet, Christelle; Tocqueville, Véronique; Dorenlor, Virginie; Eono, Florent; Eveno, Eric; Kempf, Isabelle; Marois-Créhan, Corinne

    2018-03-30

    A new multiplex qPCR targeting Mycoplasma (M.) hyopneumoniae, M. hyorhinis and M. flocculare was developed and the relationship between the detection of those mycoplasma species and the extent of gross pneumonia like lesions in slaughtered pigs lungs were investigated. The multiplex qPCR method targets the p102, p37 and fruA genes and has detection limits of 14, 146, and 16 genome equivalents μl -1 for M. hyopneumoniae, M. hyorhinis and M. flocculare, respectively. In all, 671 lungs were collected and analysed, among them 666 were scored for macroscopic pneumonia and categorized according to the extent of the lesions (no or minor lesions, moderate lesions, and extensive lesions). According to results of multiplex qPCR, 59.5% were positive for M. hyopneumoniae, 3.4% for M. hyorhinis and 34.7% for M. flocculare, with on average, 3.1x10 7 , 9.7x10 6 and 5.7x10 6 genome equivalents of mycoplasma ml -1 , respectively. More results showed that no or minor lesions were associated with multiplex qPCR-negative results or qPCR-positive results for M. flocculare. Moderate to extensive lesions were positively correlated with qPCR-positive results for M. hyopneumoniae. Extensive lesions were associated with qPCR-positive results for at least two mycoplasma species (M. hyopneumoniae and M. hyorhinis). The findings also indicated that M. hyopneumoniae and M. hyorhinis significantly increased the odds for a lung to have macroscopic pneumonia. No relationship was found between the extent of lesions and the mycoplasma genome load. This new multiplex qPCR appears to be specific, sufficiently sensitive and repeatable. The validation of this method with field samples guarantees its use for field epidemiological investigations, particularly to gain more insight into the etiology of the porcine respiratory disease complex. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

  18. On the capacity of MIMO-OFDM based diversity and spatial multiplexing in Radio-over-Fiber system

    Science.gov (United States)

    El Yahyaoui, Moussa; El Moussati, Ali; El Zein, Ghaïs

    2017-11-01

    This paper proposes a realistic and global simulation to predict the behavior of a Radio over Fiber (RoF) system before its realization. In this work we consider a 2 × 2 Multiple-Input Multiple-Output (MIMO) Orthogonal Frequency Division Multiplexing (OFDM) RoF system at 60 GHz. This system is based on Spatial Diversity (SD) which increases reliability (decreases probability of error) and Spatial Multiplexing (SMX) which increases data rate, but not necessarily reliability. The 60 GHz MIMO channel model employed in this work based on a lot of measured data and statistical analysis named Triple-S and Valenzuela (TSV) model. To the authors best knowledge; it is the first time that this type of TSV channel model has been employed for 60 GHz MIMO-RoF system. We have evaluated and compared the performance of this system according to the diversity technique, modulation schemes, and channel coding rate for Line-Of-Sight (LOS) desktop environment. The SMX coded is proposed as an intermediate system to improve the Signal to Noise Ratio (SNR) and the data rate. The resulting 2 × 2 MIMO-OFDM SMX system achieves a higher data rate up to 70 Gb/s with 64QAM and Forward Error Correction (FEC) limit of 10-3 over 25-km fiber transmission followed by 3-m wireless transmission using 7 GHz bandwidth of millimeter wave band.

  19. Evaluation of a multiplex real-time PCR method for detecting shiga toxin-producing Escherichia coli in beef and comparison to the U.S. Department of Agriculture Food Safety and Inspection Service Microbiology laboratory guidebook method.

    Science.gov (United States)

    Fratamico, Pina M; Wasilenko, Jamie L; Garman, Bradley; Demarco, Daniel R; Varkey, Stephen; Jensen, Mark; Rhoden, Kyle; Tice, George

    2014-02-01

    The "top-six" non-O157 Shiga toxin-producing Escherichia coli (STEC) serogroups (O26, O45, O103, O111, O121, and O145) most frequently associated with outbreaks and cases of foodborne illnesses have been declared as adulterants in beef by the U.S. Department of Agriculture Food Safety and Inspection Service (FSIS). Regulatory testing in beef began in June 2012. The purpose of this study was to evaluate the DuPont BAX System method for detecting these top six STEC strains and strains of E. coli O157:H7. For STEC, the BAX System real-time STEC suite was evaluated, including a screening assay for the stx and eae virulence genes and two panel assays to identify the target serogroups: panel 1 detects O26, O111, and O121, and panel 2 detects O45, O103, O145. For E. coli O157:H7, the BAX System real-time PCR assay for this specific serotype was used. Sensitivity of each assay for the PCR targets was ≥1.23 × 10(3) CFU/ml in pure culture. Each assay was 100% inclusive for the strains tested (20 to 50 per assay), and no cross-reactivity with closely related strains was observed in any of the assays. The performance of the BAX System methods was compared with that of the FSIS Microbiology Laboratory Guidebook (MLG) methods for detection of the top six STEC and E. coli O157:H7 strains in ground beef and beef trim. Generally, results of the BAX System method were similar to those of the MLG methods for detecting non-O157 STEC and E. coli O157:H7. Reducing or eliminating novobiocin in modified tryptic soy broth (mTSB) may improve the detection of STEC O111 strains; one beef trim sample inoculated with STEC O111 produced a negative result when enriched in mTSB with 8 mg/liter novobiocin but was positive when enriched in mTSB without novobiocin. The results of this study indicate the feasibility of deploying a panel of real-time PCR assay configurations for the detection and monitoring of the top six STEC and E. coli O157:H7 strains in beef. The approach could easily be adapted

  20. Comparative effects of 60Co γ-rays and neon and helium ions on cycle duration and division probability of EMT 6 cells. A time-lapse cinematography study

    International Nuclear Information System (INIS)

    Collyn-d'Hooghe, M.; Hemon, D.; Gilet, R.

    1981-01-01

    Exponentially growing cultures of EMT 6 cells were irradiated in vitro with neon ions, helium ions or 60 Co γ-rays. Time-lapse cinematography allowed the determination, for individual cells, of cycle duration, success of the mitotic division and the age of the cell at the moment of irradiation. Irradiation induced a significant mitotic delay increasing proportionally with the delivered dose. Using mitotic delay as an endpoint, the r.b.e. for neon ions with respect to 60 Co γ-rays was 3.3 +- 0.2 while for helium ions it was 1.2 +- 0.1. Mitotic delay was greatest in those cells that had progressed furthest in their cycle at the time of irradiation. No significant mitotic delay was observed in the post-irradiation generation. Division probability was significantly reduced by irradiation both in the irradiated and in the post-irradiated generation. The reduction in division probability obtained with 3 Gy of neon ions was similar to that obtained after irradiation with 6 Gy of helium ions or 60 Co γ-rays. (author)