WorldWideScience

Sample records for time 3d multiplexer

  1. [Real time 3D echocardiography

    Science.gov (United States)

    Bauer, F.; Shiota, T.; Thomas, J. D.

    2001-01-01

    Three-dimensional representation of the heart is an old concern. Usually, 3D reconstruction of the cardiac mass is made by successive acquisition of 2D sections, the spatial localisation and orientation of which require complex guiding systems. More recently, the concept of volumetric acquisition has been introduced. A matricial emitter-receiver probe complex with parallel data processing provides instantaneous of a pyramidal 64 degrees x 64 degrees volume. The image is restituted in real time and is composed of 3 planes (planes B and C) which can be displaced in all spatial directions at any time during acquisition. The flexibility of this system of acquisition allows volume and mass measurement with greater accuracy and reproducibility, limiting inter-observer variability. Free navigation of the planes of investigation allows reconstruction for qualitative and quantitative analysis of valvular heart disease and other pathologies. Although real time 3D echocardiography is ready for clinical usage, some improvements are still necessary to improve its conviviality. Then real time 3D echocardiography could be the essential tool for understanding, diagnosis and management of patients.

  2. Solid state light source for wavelength multiplex 3D

    Science.gov (United States)

    Huang, Junejei

    2012-10-01

    A solid state light source provided for wavelength multiplex 3D Display is proposed. The system of solid state light source includes blue laser arrays of two wavelengths, a 2-ring phosphor wheel, a multi-band filter and a TIR prism. Green and red phosphors excited by blue lasers provide the original green and red lights of wide bandwidth. By passing through or reflected by a multi-band filter, two groups of green and red lights of narrow bandwidth for left or right eyes are selected. Blue lasers of two wavelengths also provide two blue lights for left and right eyes. Instead of using a second rotated narrow band filters that synchronized with the first phosphor wheel, a wheel having two rings coated with mirrors and phosphors is used to replace the synchronization existing in the conventional two wheels method. After passing the 2-ring wheel, the light source switches between two light paths that lead to be reflected or transmitting through the multiband filter. The multi-band filter can be disposed in a telecentric optical path to secure a high efficiency for the filter. A compact spectral multiplex light source is realized and can be directly attached to any existing optical engine.

  3. Real time 3D photometry

    Science.gov (United States)

    Fernandez-Balbuena, A. A.; Vazquez-Molini, D.; García-Botella, A.; Romo, J.; Serrano, Ana

    2017-09-01

    The photometry and radiometry measurement is a well-developed field. The necessity of measuring optical systems performance involves the use of several techniques like Gonio-photometry. The Gonio photometers are a precise measurement tool that is used in the lighting area like office, luminaire head car lighting, concentrator /collimator measurement and all the designed and fabricated optical systems that works with light. There is one disadvantage in this kind of measurements that obtain the intensity polar curves and the total flux of the optical system. In the industry, there are good Gonio photometers that are precise and reliable but they are very expensive and the measurement time is long. In industry the cost can be of minor importance but measuring time that is around 30 minutes is of major importance due to trained staff cost. We have designed a system to measure photometry in real time; it consists in a curved screen to get a huge measurement angle and a CCD. The system to be measured projects light onto the screen and the CCD records a video of the screen obtaining an image of the projected profile. A complex calibration permits to trace screen data (x,y,z) to intensity polar curve (I,αγ). This intensity is obtained in candels (cd) with an image + processing time below one second.

  4. Multiplex, quantitative cellular analysis in large tissue volumes with clearing-enhanced 3D microscopy (Ce3D).

    Science.gov (United States)

    Li, Weizhe; Germain, Ronald N; Gerner, Michael Y

    2017-08-29

    Organ homeostasis, cellular differentiation, signal relay, and in situ function all depend on the spatial organization of cells in complex tissues. For this reason, comprehensive, high-resolution mapping of cell positioning, phenotypic identity, and functional state in the context of macroscale tissue structure is critical to a deeper understanding of diverse biological processes. Here we report an easy to use method, clearing-enhanced 3D (C e 3D), which generates excellent tissue transparency for most organs, preserves cellular morphology and protein fluorescence, and is robustly compatible with antibody-based immunolabeling. This enhanced signal quality and capacity for extensive probe multiplexing permits quantitative analysis of distinct, highly intermixed cell populations in intact C e 3D-treated tissues via 3D histo-cytometry. We use this technology to demonstrate large-volume, high-resolution microscopy of diverse cell types in lymphoid and nonlymphoid organs, as well as to perform quantitative analysis of the composition and tissue distribution of multiple cell populations in lymphoid tissues. Combined with histo-cytometry, C e 3D provides a comprehensive strategy for volumetric quantitative imaging and analysis that bridges the gap between conventional section imaging and disassociation-based techniques.

  5. Diversity and Multiplexing Technologies by 3D Beams in Polarized Massive MIMO Systems

    Directory of Open Access Journals (Sweden)

    Xin Su

    2016-01-01

    Full Text Available Massive multiple input, multiple output (M-MIMO technologies have been proposed to scale up data rates reaching gigabits per second in the forthcoming 5G mobile communications systems. However, one of crucial constraints is a dimension in space to implement the M-MIMO. To cope with the space constraint and to utilize more flexibility in 3D beamforming (3D-BF, we propose antenna polarization in M-MIMO systems. In this paper, we design a polarized M-MIMO (PM-MIMO system associated with 3D-BF applications, where the system architectures for diversity and multiplexing technologies achieved by polarized 3D beams are provided. Different from the conventional 3D-BF achieved by planar M-MIMO technology to control the downtilted beam in a vertical domain, the proposed PM-MIMO realizes 3D-BF via the linear combination of polarized beams. In addition, an effective array selection scheme is proposed to optimize the beam-width and to enhance system performance by the exploration of diversity and multiplexing gains; and a blind channel estimation (BCE approach is also proposed to avoid pilot contamination in PM-MIMO. Based on the Long Term Evolution-Advanced (LTE-A specification, the simulation results finally confirm the validity of our proposals.

  6. Multiplexed 3D Cellular Super-Resolution Imaging with DNA-PAINT and Exchange-PAINT

    Science.gov (United States)

    Jungmann, R.; Avendano, M.S.; Woehrstein, J.B.; Dai, M.; Shih, W.M.; Yin, P.

    2014-01-01

    While super-resolution fluorescence microscopy is a powerful tool for biological research, obtaining multiplexed images for a large number of distinct target species remains challenging. Here we use the transient binding of short fluorescently labeled oligonucleotides (DNA-PAINT, point accumulation for imaging in nanoscale topography) for simple and easy-to-implement multiplexed 3D super-resolution imaging inside fixed cells and achieve sub-10 nm spatial resolution in vitro using synthetic DNA structures. We also report a novel approach for multiplexing (Exchange-PAINT) that allows sequential imaging of multiple targets using only a single dye and a single laser source. We experimentally demonstrate ten-“color” super-resolution imaging in vitro on synthetic DNA structures and four-“color” imaging of proteins in a fixed cell. PMID:24487583

  7. Field lens multiplexing in holographic 3D displays by using Bragg diffraction based volume gratings

    Science.gov (United States)

    Fütterer, G.

    2016-11-01

    Applications, which can profit from holographic 3D displays, are the visualization of 3D data, computer-integrated manufacturing, 3D teleconferencing and mobile infotainment. However, one problem of holographic 3D displays, which are e.g. based on space bandwidth limited reconstruction of wave segments, is to realize a small form factor. Another problem is to provide a reasonable large volume for the user placement, which means to provide an acceptable freedom of movement. Both problems should be solved without decreasing the image quality of virtual and real object points, which are generated within the 3D display volume. A diffractive optical design using thick hologram gratings, which can be referred to as Bragg diffraction based volume gratings, can provide a small form factor and high definition natural viewing experience of 3D objects. A large collimated wave can be provided by an anamorphic backlight unit. The complex valued spatial light modulator add local curvatures to the wave field he is illuminated with. The modulated wave field is focused onto to the user plane by using a volume grating based field lens. Active type liquid crystal gratings provide 1D fine tracking of approximately +/- 8° deg. Diffractive multiplex has to be implemented for each color and for a set of focus functions providing coarse tracking. Boundary conditions of the diffractive multiplexing are explained. This is done in regards to the display layout and by using the coupled wave theory (CWT). Aspects of diffractive cross talk and its suppression will be discussed including longitudinal apodized volume gratings.

  8. 3-D display of magnetic resonance images by use of multiplex holography

    International Nuclear Information System (INIS)

    Oshita, Hiroshi; Yokoi, Shigeki; Toriwaki, Jun-ichiro; Matsuo, Michimasa.

    1987-01-01

    In this paper, we study the method of generating a true 3-D image from MRI multiple slices by using the multiplex holography. The purpose in our method is to display effectively the density information distributed in the 3-D space. For making a multiplex hologram any projected image in each direction from multiple slices should be computed. We study computer processing for producing images of good quality from the viewpoint of displaying the density distribution in the 3-D space clearly and discriminating lesions from normal tissues. The following two kinds of processing are studied. (1) Projection: To generate fastly projections of good quality, the following subjects are examined. 1. Computation method of density values on a projected image from an original slice image. 2. Methods for projection of multiple slices. 3. Interpolation of slices between original neighbouring slices. 4. Composition of several sets of multiple slices in different directions. (2) Image enahancement: To enhance depth feeling of slices and density values in lesions, the following methods are studied. 1. Enhancement of depth feeling by a weighted sum of slices. 2. Slice enhancement by multiplying the particular slices by weights. 3. Lesion enhancement by thresholding. 4. Lesion enhancement by operations between images with different imaging parameters. The following are the results ; projected images of the quality good enough for constructing a multiplex hologram can be obtained by the simple method proposed in this paper, using four sets of multiple slices in four different directions. The enhancement technique mentioned above was proved to be effective for improving the understandability of 3-D information. (author)

  9. A 128 Multiplexing Factor Time-Domain SQUID Multiplexer

    Science.gov (United States)

    Prêle, D.; Voisin, F.; Piat, M.; Decourcelle, T.; Perbost, C.; Chapron, C.; Rambaud, D.; Maestre, S.; Marty, W.; Montier, L.

    2016-07-01

    A cryogenic 128:1 Time-Domain Multiplexer (TDM) has been developed for the readout of kilo-pixel Transition Edge Sensor (TES) arrays dedicated to the Q&U Bolometric Interferometer for Cosmology (QUBIC) instrument which aims to measure the B-mode polarization of the Cosmic Microwave Background. Superconducting QUantum Interference Devices (SQUIDs) are usually used to read out TESs. Moreover, SQUIDs are used to build TDM by biasing sequentially the SQUIDs connected together—one for each TES. In addition to this common technique which allows a typical 32 multiplexing factor, a cryogenic integrated circuit provides a 4:1 second multiplexing stage. This cryogenic integrated circuit is one of the original part of our TDM achieving an unprecedented 128 multiplexing factor. We present these two dimension TDM stages: topology of the SQUID multiplexer, operation of the cryogenic integrated circuit, and integration of the full system to read out a TES array dedicated to the QUBIC instrument. Flux-locked loop operation in multiplexed mode is also discussed.

  10. 3D Flash LIDAR real time embedded processing, Phase I

    Data.gov (United States)

    National Aeronautics and Space Administration — Advanced Scientific Concepts, Inc. (ASC) is a small business, which has developed a compact, eye-safe 3D Flash LIDARTM Camera (FLC) well suited for real-time...

  11. LandSIM3D: modellazione in real time 3D di dati geografici

    Directory of Open Access Journals (Sweden)

    Lambo Srl Lambo Srl

    2009-03-01

    Full Text Available LandSIM3D: realtime 3D modelling of geographic data LandSIM3D allows to model in 3D an existing landscape in a few hours only and geo-referenced offering great landscape analysis and understanding tools. 3D projects can then be inserted into the existing landscape with ease and precision. The project alternatives and impact can then be visualized and studied into their immediate environmental. The complex evolution of the landscape in the future can also be simulated and the landscape model can be manipulated interactively and better shared with colleagues. For that reason, LandSIM3D is different from traditional 3D imagery solutions, normally reserved for computer graphics experts. For more information about LandSIM3D, go to www.landsim3d.com.

  12. Memory erasure using time-multiplexed potentials

    Science.gov (United States)

    Talukdar, Saurav; Bhaban, Shreyas; Salapaka, Murti V.

    2017-06-01

    We study the thermodynamics of a Brownian particle under the influence of a time-multiplexed harmonic potential of finite width. The memory storage mechanism and the erasure protocol based on time-multiplexed potentials are utilized to experimentally realize erasure with work performed close to Landauer's bound. We quantify the work performed on the system with respect to the duty ratio of time multiplexing, which also provides a handle for approaching reversible erasures. A Langevin dynamics based simulation model is developed for the proposed memory bit and the erasure protocol, which guides the experimental realization. The study also provides insight into transport on the microscale.

  13. Real-time quantitative visualization of 3D structural information.

    Science.gov (United States)

    Alexandrov, Sergey A; Uttam, Shikhar; Bista, Rajan K; Zhao, Chengquan; Liu, Yang

    2012-04-09

    We demonstrate a novel approach for the real time visualization and quantification of the 3D spatial frequencies in an image domain. Our approach is based on the spectral encoding of spatial frequency principle and permits the formation of an image as a color map in which spatially separated spectral wavelengths correspond to the dominant 3D spatial frequencies of the object. We demonstrate that our approach can visualize and analyze the dominant axial internal structure for each image point in real time and with nanoscale sensitivity to structural changes. Computer modeling and experimental results of instantaneous color visualization and quantification of 3D structures of a model system and biological samples are presented.

  14. Simultaneous full-field 3-D vibrometry of the human eardrum using spatial-bandwidth multiplexed holography.

    Science.gov (United States)

    Khaleghi, Morteza; Guignard, Jérémie; Furlong, Cosme; Rosowski, John J

    2015-01-01

    Holographic interferometric methods typically require the use of three sensitivity vectors in order to obtain three-dimensional (3-D) information. Methods based on multiple directions of illumination have limited applications when studying biological tissues that have temporally varying responses such as the tympanic membrane (TM). Therefore, to measure 3-D displacements in such applications, the measurements along all the sensitivity vectors have to be done simultaneously. We propose a multiple-illumination directions approach to measure 3-D displacements from a single-shot hologram that contains displacement information from three sensitivity vectors. The hologram of an object of interest is simultaneously recorded with three incoherently superimposed pairs of reference and object beams. The incident off-axis angles of the reference beams are adjusted such that the frequency components of the multiplexed hologram are completely separate. Because of the differences in the directions and wavelengths of the reference beams, the positions of each reconstructed image corresponding to each sensitivity vector are different. We implemented a registration algorithm to accurately translate individual components of the hologram into a single global coordinate system to calculate 3-D displacements. The results include magnitudes and phases of 3-D sound-induced motions of a human cadaveric TM at several excitation frequencies showing modal and traveling wave motions on its surface.

  15. Global travel time tomography with 3-D reference models

    NARCIS (Netherlands)

    Amaru, M.L.

    2007-01-01

    In this study, a global high-resolution P-wave velocity model is obtained for the Earth's crust and mantle using travel time tomography. Improvements to previous models are achieved by incorporating additional data and advancing the method to use 3-D reference models. The newly compiled data set

  16. Surface Explorations : 3D Moving Images as Cartographies of Time

    NARCIS (Netherlands)

    Verhoeff, N.|info:eu-repo/dai/nl/241603471

    2016-01-01

    Moving images of travel and exploration have a long history. In this essay I will examine how the trope of navigation in 3D moving images can work towards an intimate and haptic encounter with other times and other places – elsewhen and elsewhere. The particular navigational construction of space in

  17. Vel-IO 3D: A tool for 3D velocity model construction, optimization and time-depth conversion in 3D geological modeling workflow

    Science.gov (United States)

    Maesano, Francesco E.; D'Ambrogi, Chiara

    2017-02-01

    We present Vel-IO 3D, a tool for 3D velocity model creation and time-depth conversion, as part of a workflow for 3D model building. The workflow addresses the management of large subsurface dataset, mainly seismic lines and well logs, and the construction of a 3D velocity model able to describe the variation of the velocity parameters related to strong facies and thickness variability and to high structural complexity. Although it is applicable in many geological contexts (e.g. foreland basins, large intermountain basins), it is particularly suitable in wide flat regions, where subsurface structures have no surface expression. The Vel-IO 3D tool is composed by three scripts, written in Python 2.7.11, that automate i) the 3D instantaneous velocity model building, ii) the velocity model optimization, iii) the time-depth conversion. They determine a 3D geological model that is consistent with the primary geological constraints (e.g. depth of the markers on wells). The proposed workflow and the Vel-IO 3D tool have been tested, during the EU funded Project GeoMol, by the construction of the 3D geological model of a flat region, 5700 km2 in area, located in the central part of the Po Plain. The final 3D model showed the efficiency of the workflow and Vel-IO 3D tool in the management of large amount of data both in time and depth domain. A 4 layer-cake velocity model has been applied to a several thousand (5000-13,000 m) thick succession, with 15 horizons from Triassic up to Pleistocene, complicated by a Mesozoic extensional tectonics and by buried thrusts related to Southern Alps and Northern Apennines.

  18. Extra dimensions: 3d and time in pdf documentation

    International Nuclear Information System (INIS)

    Graf, N A

    2008-01-01

    High energy physics is replete with multi-dimensional information which is often poorly represented by the two dimensions of presentation slides and print media. Past efforts to disseminate such information to a wider audience have failed for a number of reasons, including a lack of standards which are easy to implement and have broad support. Adobe's Portable Document Format (PDF) has in recent years become the de facto standard for secure, dependable electronic information exchange. It has done so by creating an open format, providing support for multiple platforms and being reliable and extensible. By providing support for the ECMA standard Universal 3D (U3D) file format in its free Adobe Reader software, Adobe has made it easy to distribute and interact with 3D content. By providing support for scripting and animation, temporal data can also be easily distributed to a wide audience. In this talk, we present examples of HEP applications which take advantage of this functionality. We demonstrate how 3D detector elements can be documented, using either CAD drawings or other sources such as GEANT visualizations as input. Using this technique, higher dimensional data, such as LEGO plots or time-dependent information can be included in PDF files. In principle, a complete event display, with full interactivity, can be incorporated into a PDF file. This would allow the end user not only to customize the view and representation of the data, but to access the underlying data itself

  19. Extra Dimensions: 3D and Time in PDF Documentation

    Energy Technology Data Exchange (ETDEWEB)

    Graf, Norman A.; /SLAC

    2011-11-10

    High energy physics is replete with multi-dimensional information which is often poorly represented by the two dimensions of presentation slides and print media. Past efforts to disseminate such information to a wider audience have failed for a number of reasons, including a lack of standards which are easy to implement and have broad support. Adobe's Portable Document Format (PDF) has in recent years become the de facto standard for secure, dependable electronic information exchange. It has done so by creating an open format, providing support for multiple platforms and being reliable and extensible. By providing support for the ECMA standard Universal 3D (U3D) file format in its free Adobe Reader software, Adobe has made it easy to distribute and interact with 3D content. By providing support for scripting and animation, temporal data can also be easily distributed to a wide audience. In this talk, we present examples of HEP applications which take advantage of this functionality. We demonstrate how 3D detector elements can be documented, using either CAD drawings or other sources such as GEANT visualizations as input. Using this technique, higher dimensional data, such as LEGO plots or time-dependent information can be included in PDF files. In principle, a complete event display, with full interactivity, can be incorporated into a PDF file. This would allow the end user not only to customize the view and representation of the data, but to access the underlying data itself.

  20. Modular high power diode lasers with flexible 3D multiplexing arrangement optimized for automated manufacturing

    Science.gov (United States)

    Könning, Tobias; Bayer, Andreas; Plappert, Nora; Faßbender, Wilhelm; Dürsch, Sascha; Küster, Matthias; Hubrich, Ralf; Wolf, Paul; Köhler, Bernd; Biesenbach, Jens

    2018-02-01

    A novel 3-dimensional arrangement of mirrors is used to re-arrange beams from 1-D and 2-D high power diode laser arrays. The approach allows for a variety of stacking geometries, depending on individual requirements. While basic building blocks, including collimating optics, always remain the same, most adaptations can be realized by simple rearrangement of a few optical components. Due to fully automated alignment processes, the required changes can be realized in software by changing coordinates, rather than requiring customized mechanical components. This approach minimizes development costs due to its flexibility, while reducing overall product cost by using similar building blocks for a variety of products and utilizing a high grade of automation. The modules can be operated with industrial grade water, lowering overall system and maintenance cost. Stackable macro coolers are used as the smallest building block of the system. Each cooler can hold up to five diode laser bars. Micro optical components, collimating the beam, are mounted directly to the cooler. All optical assembly steps are fully automated. Initially, the beams from all laser bars propagate in the same direction. Key to the concept is an arrangement of deflectors, which re-arrange the beams into a 2-D array of the desired shape and high fill factor. Standard multiplexing techniques like polarization- or wavelengths-multiplexing have been implemented as well. A variety of fiber coupled modules ranging from a few hundred watts of optical output power to multiple kilowatts of power, as well as customized laser spot geometries like uniform line sources, have been realized.

  1. Real-time 3D light field transmission

    Science.gov (United States)

    Balogh, Tibor; Kovács, Péter Tamás

    2010-05-01

    Although capturing and displaying stereo 3D content is now commonplace, information-rich light-field video content capture, transmission and display are much more challenging, resulting in at least one order of magnitude increase in complexity even in the simplest cases. We present an end-to-end system capable of capturing and real-time displaying of high-quality light-field video content on various HoloVizio light-field displays, providing very high 3D image quality and continuous motion parallax. The system is compact in terms of number of computers, and provides superior image quality, resolution and frame rate compared to other published systems. To generate light-field content, we have built a camera system with a large number of cameras and connected them to PC computers. The cameras were in an evenly spaced linear arrangement. The capture PC was directly connected through a single gigabit Ethernet connection to the demonstration 3D display, supported by a PC computation cluster. For the task of dense light field displaying massively parallel reordering and filtering of the original camera images is required. We were utilizing both CPU and GPU threads for this task. On the GPU we do the light-field conversion and reordering, filtering and the YUV-RGB conversion. We use OpenGL 3.0 shaders and 2D texture arrays to have easy access to individual camera images. A network-based synchronization scheme is used to present the final rendered images.

  2. Consideration for wavelength multiplexing versus time multiplexing in optical transport network

    DEFF Research Database (Denmark)

    Limal, Emmanuel; Stubkjær, Kristian Elmholdt

    1999-01-01

    We compare optical wavelength multiplexing and time multiplexing techniquesfor optical transport network by studying the space switch sizes of OXCs andtheir interfaces as a function of the fraction of add/drop traffic....

  3. 3D detectors with high space and time resolution

    Science.gov (United States)

    Loi, A.

    2018-01-01

    For future high luminosity LHC experiments it will be important to develop new detector systems with increased space and time resolution and also better radiation hardness in order to operate in high luminosity environment. A possible technology which could give such performances is 3D silicon detectors. This work explores the possibility of a pixel geometry by designing and simulating different solutions, using Sentaurus Tecnology Computer Aided Design (TCAD) as design and simulation tool, and analysing their performances. A key factor during the selection was the generated electric field and the carrier velocity inside the active area of the pixel.

  4. Searching protein 3-D structures in linear time.

    Science.gov (United States)

    Shibuya, Tetsuo

    2010-03-01

    One of the most important issues in the post-genomic molecular biology is the analysis of protein three-dimensional (3-D) structures, and searching over the 3-D structure databases of them is becoming more and more important. The root mean square deviation (RMSD) is the most popular similarity measure for comparing two molecular structures. In this article, we propose new theoretically and practically fast algorithms for the basic problem of finding all the substructures of structures in a structure database of chain molecules (such as proteins), whose RMSDs to the query are within a given constant threshold. The best-known worst-case time complexity for the problem is O(N log m), where N is the database size and m is the query size. The previous best-known expected time complexity for the problem is also O(N log m). We also propose a new breakthrough linear-expected-time algorithm. It is not only a theoretically significant improvement over previous algorithms, but also a practically faster algorithm, according to computational experiments. Our experiments over the whole Protein Data Bank (PDB) database show that our algorithm is 3.6-28 times faster than previously known algorithms, to search for similar substructures whose RMSDs are within 1A to queries of ordinary lengths. We also propose a series of preprocessing algorithms that enable faster queries, though there have been no known indexing algorithm whose query time complexity is better than the above O(N log m) bound. One is an O(N log(2)N)-time and O(N log N)-space preprocessing algorithm with expected query time complexity of O(m + N given complex square root of m). Another is an O(N log N)-time and O(N)-space preprocessing algorithm with expected query time complexity of O(N given complex square root of m + m log (N given m)).(1)

  5. Real-time 3-D Reconstruction by Means of Structured Light Illumination

    Science.gov (United States)

    Liu, Kai

    Structured light illumination (SLI) is the process of projecting a series of light striped patterns such that, when viewed at an angle, a digital camera can reconstruct a 3-D model of a target object's surface. But by relying on a series of time multiplexed patterns, SLI is not typically associated with video applications. For this purpose of acquiring 3-D video, a common SLI technique is to drive the projector/camera pair at very high frame rates such that any object's motion is small over the pattern set. But at these high frame rates, the speed at which the incoming video can be processed becomes an issue. So much so that many video-based SLI systems record camera frames to memory and then apply off-line processing. In order to overcome this processing bottleneck and produce 3-D point clouds in real-time, we present a lookup-table (LUT) based solution that in our experiments, using a 640 by 480 video stream, can generate intermediate phase data at 1063.8 frames per second and full 3-D coordinate point clouds at 228.3 frames per second. These achievements are 25 and 10 times faster than previously reported studies. At the same time, a novel dual-frequency pattern is developed which combines a high-frequency sinusoid component with a unit-frequency sinusoid component, where the high-frequency component is used to generate robust phase information and the unit-frequency component is used to reduce phase unwrapping ambiguities. Finally, we developed a gamma model for SLI, which can correct the non-linear distortion caused by the optical devices. For three-step phase measuring profilometry (PMP), analysis of the root mean squared error of the corrected phase showed a 60x reduction in phase error when the gamma calibration is performed versus 33x reduction without calibration. KEYWORDS: Real-time 3-D Reconstruction, Structured Light Illumination, Phase Measuring Profilometry, Gamma Correction, Phase Channel Multiplexing Pattern.

  6. Real time 3D scanner: investigations and results

    Science.gov (United States)

    Nouri, Taoufik; Pflug, Leopold

    1993-12-01

    This article presents a concept of reconstruction of 3-D objects using non-invasive and touch loss techniques. The principle of this method is to display parallel interference optical fringes on an object and then to record the object under two angles of view. According to an appropriated treatment one reconstructs the 3-D object even when the object has no symmetrical plan. The 3-D surface data is available immediately in digital form for computer- visualization and for analysis software tools. The optical set-up for recording the 3-D object, the 3-D data extraction and treatment, as well as the reconstruction of the 3-D object are reported and commented on. This application is dedicated for reconstructive/cosmetic surgery, CAD, animation and research purposes.

  7. Towards real-time 3D ultrasound planning and personalized 3D printing for breast HDR brachytherapy treatment

    International Nuclear Information System (INIS)

    Poulin, Eric; Gardi, Lori; Fenster, Aaron; Pouliot, Jean; Beaulieu, Luc

    2015-01-01

    Two different end-to-end procedures were tested for real-time planning in breast HDR brachytherapy treatment. Both methods are using a 3D ultrasound (3DUS) system and a freehand catheter optimization algorithm. They were found fast and efficient. We demonstrated a proof-of-concept approach for personalized real-time guidance and planning to breast HDR brachytherapy treatments

  8. Time domain topology optimization of 3D nanophotonic devices

    DEFF Research Database (Denmark)

    Elesin, Yuriy; Lazarov, Boyan Stefanov; Jensen, Jakob Søndergaard

    2014-01-01

    We present an efficient parallel topology optimization framework for design of large scale 3D nanophotonic devices. The code shows excellent scalability and is demonstrated for optimization of broadband frequency splitter, waveguide intersection, photonic crystal-based waveguide and nanowire......-based waveguide. The obtained results are compared to simplified 2D studies and we demonstrate that 3D topology optimization may lead to significant performance improvements. © 2013 Elsevier B.V. All rights reserved....

  9. Extra dimensions: 3D and time in PDF documentation

    International Nuclear Information System (INIS)

    Graf, N A

    2011-01-01

    Experimental science is replete with multi-dimensional information which is often poorly represented by the two dimensions of presentation slides and print media. Past efforts to disseminate such information to a wider audience have failed for a number of reasons, including a lack of standards which are easy to implement and have broad support. Adobe's Portable Document Format (PDF) has in recent years become the de facto standard for secure, dependable electronic information exchange. It has done so by creating an open format, providing support for multiple platforms and being reliable and extensible. By providing support for the ECMA standard Universal 3D (U3D) file format in its free Adobe Reader software, Adobe has made it easy to distribute and interact with 3D content. By providing support for scripting and animation, temporal data can also be easily distributed to a wide, non-technical audience. We discuss how the field of radiation imaging could benefit from incorporating full 3D information about not only the detectors, but also the results of the experimental analyses, in its electronic publications. In this article, we present examples drawn from high-energy physics, mathematics and molecular biology which take advantage of this functionality. We demonstrate how 3D detector elements can be documented, using either CAD drawings or other sources such as GEANT visualizations as input.

  10. Time Evolution in 3D Metal Microstructures-Recrystallization

    DEFF Research Database (Denmark)

    Juul Jensen, Dorte; Schmidt, Søren

    2009-01-01

    The three dimensional x-ray diffraction (3DXRD) concept is shortly described and new experimental updates are highlighted. The potentials and limitation of the 3DXRD method are compared to those of other 3D methods. 3DXRD has been used for in-situ studies of recrystallization and new migration rate...

  11. REAL-TIME CAMERA GUIDANCE FOR 3D SCENE RECONSTRUCTION

    Directory of Open Access Journals (Sweden)

    F. Schindler

    2012-07-01

    Full Text Available We propose a framework for operator guidance during the image acquisition process for reliable multi-view stereo reconstruction. Goal is to achieve full coverage of the object and sufficient overlap. Multi-view stereo is a commonly used method to reconstruct both camera trajectory and 3D object shape. After determining an initial solution, a globally optimal reconstruction is usually obtained by executing a bundle adjustment involving all images. Acquiring suitable images, however, still requires an experienced operator to ensure accuracy and completeness of the final solution. We propose an interactive framework for guiding unexperienced users or possibly an autonomous robot. Using approximate camera orientations and object points we estimate point uncertainties within a sliding bundle adjustment and suggest appropriate camera movements. A visual feedback system communicates the decisions to the user in an intuitive way. We demonstrate the suitability of our system with a virtual image acquisition simulation as well as in real-world scenarios. We show that when following the camera movements suggested by our system, the proposed framework is able to generate good approximate values for the bundle adjustment, leading to accurate results compared to ground truth after few iterations. Possible applications are non-professional 3D acquisition systems on low-cost platforms like mobile phones, autonomously navigating robots as well as online flight planning of unmanned aerial vehicles.

  12. Future enhancements to 3D printing and real time production

    Science.gov (United States)

    Landa, Joseph; Jenkins, Jeffery; Wu, Jerry; Szu, Harold

    2014-05-01

    The cost and scope of additive printing machines range from several hundred to hundreds of thousands of dollars. For the extra money, one can get improvements in build size, selection of material properties, resolution, and consistency. However, temperature control during build and fusing predicts outcome and protects the IP by large high cost machines. Support material options determine geometries that can be accomplished which drives cost and complexity of printing heads. Historically, 3D printers have been used for design and prototyping efforts. Recent advances and cost reduction sparked new interest in developing printed products and consumables such as NASA who is printing food, printing consumer parts (e.g. cell phone cases, novelty toys), making tools and fixtures in manufacturing, and recursively print a self-similar printer (c.f. makerbot). There is a near term promise of the capability to print on demand products at the home or office... directly from the printer to use.

  13. 3D-Pathology: a real-time system for quantitative diagnostic pathology and visualisation in 3D

    Science.gov (United States)

    Gottrup, Christian; Beckett, Mark G.; Hager, Henrik; Locht, Peter

    2005-02-01

    This paper presents the results of the 3D-Pathology project conducted under the European EC Framework 5. The aim of the project was, through the application of 3D image reconstruction and visualization techniques, to improve the diagnostic and prognostic capabilities of medical personnel when analyzing pathological specimens using transmitted light microscopy. A fully automated, computer-controlled microscope system has been developed to capture 3D images of specimen content. 3D image reconstruction algorithms have been implemented and applied to the acquired volume data in order to facilitate the subsequent 3D visualization of the specimen. Three potential application fields, immunohistology, cromogenic in situ hybridization (CISH) and cytology, have been tested using the prototype system. For both immunohistology and CISH, use of the system furnished significant additional information to the pathologist.

  14. Time within time: 3D printed sculptures within holographic art practice

    Science.gov (United States)

    Chang, Yin-Ren; Richardson, Martin

    2015-03-01

    Holography is a time-based medium, which uses its own aesthetics and techniques to interpret colour and light. This exclusive descriptive language does not simply represent a particular scenario in the moment of recording, but also documents the performance light during the shooting process. Nowadays 3D graphic software and Internet offer practitioners greater mobility in both the development and the delivery of their artwork. Furthermore, the diverse web-based social media presents unlimited and various spaces to facilitate artists in the exchange of creative knowledge, it enables them to collaborate on their projects with external connections - audience, specialists, etc. Within the analogue holography art practice, there is a primary lack of interface, or, in other words, it cannot utilise any digital creative tools. 3D printing makes it possible to bridge the gap between cyber space and the holographic world; even more so, as this emerging technique also becomes a platform, which can connect computational data and light information. The application of 3D printing in contemporary art will reshape the process of creation, as well as the form of visual narrative itself. New technologies continually and increasingly involve the projection of another artistic dimension, and the term "visual" embarks on challenging the generally accepted notion of understanding art and interacting with it. As new pathways of practice are established, it will take years to build a complete understanding of this medium in order to be able to take a full advantage of the benefits its use offers. This paper is aimed at looking for the potential new ways of artistic expression, deriving from the interrelation between analogue holography and 3D printing. It will also attempt an articulate assessment of 3D printing within the dynamic holographic aesthetics.

  15. Demonstration of hybrid orbital angular momentum multiplexing and time-division multiplexing passive optical network.

    Science.gov (United States)

    Wang, Andong; Zhu, Long; Liu, Jun; Du, Cheng; Mo, Qi; Wang, Jian

    2015-11-16

    Mode-division multiplexing passive optical network (MDM-PON) is a promising scheme for next-generation access networks to further increase fiber transmission capacity. In this paper, we demonstrate the proof-of-concept experiment of hybrid mode-division multiplexing (MDM) and time-division multiplexing (TDM) PON architecture by exploiting orbital angular momentum (OAM) modes. Bidirectional transmissions with 2.5-Gbaud 4-level pulse amplitude modulation (PAM-4) downstream and 2-Gbaud on-off keying (OOK) upstream are demonstrated in the experiment. The observed optical signal-to-noise ratio (OSNR) penalties for downstream and upstream transmissions at a bit-error rate (BER) of 2 × 10(-3) are less than 2.0 dB and 3.0 dB, respectively.

  16. Performance Analysis of Statistical Time Division Multiplexing Systems

    Directory of Open Access Journals (Sweden)

    Johnson A. AJIBOYE

    2010-12-01

    Full Text Available Multiplexing is a way of accommodating many input sources of a low capacity over a high capacity outgoing channel. Statistical Time Division Multiplexing (STDM is a technique that allows the number of users to be multiplexed over the channel more than the channel can afford. The STDM normally exploits unused time slots by the non-active users and allocates those slots for the active users. Therefore, STDM is appropriate for bursty sources. In this way STDM normally utilizes channel bandwidth better than traditional Time Division Multiplexing (TDM. In this work, the statistical multiplexer is viewed as M/M/1queuing system and the performance is measured by comparing analytical results to simulation results using Matlab. The index used to determine the performance of the statistical multiplexer is the number of packets both in the system and the queue. Comparison of analytical results was also done between M/M/1 and M/M/2 and also between M/M/1 and M/D/1 queue systems. At high utilizations, M/M/2 performs better than M/M/1. M/D/1 also outperforms M/M1.

  17. Capacitively-Coupled SQUID Bias for Time Division Multiplexing

    Science.gov (United States)

    Prêle, D.; Voisin, F.; Piat, M.; Martino, J.; Decourcelle, T.; Chapron, C.

    2014-08-01

    The multiplexing scheme presented in this paper is part of the readout chain of the QUBIC instrument devoted to cosmic microwave background polarization observations. It is based on time domain multiplexing using superconducting quantum interference devices (SQUIDs) to read out a large array of superconducting bolometers. The originality of the multiplexer presented here lies in the use of capacitors for the SQUID addressing. Capacitive coupling allows us to bias many SQUIDs in parallel (in a 2D topology), with low crosstalk and low power dissipation of the cryogenic front-end readout. However, capacitors in series with the SQUID require a modification of the addressing strategy. This paper presents a bias reversal technique adopted to sequentially address the SQUIDs through capacitors using a cryogenic SiGe integrated circuit. We further present the different limitations of this technique and how to choose the proper capacitance for a given multiplexing frequency and current source compliance.

  18. 3D printed multiplexed electrospinning sources for large-scale production of aligned nanofiber mats with small diameter spread

    Science.gov (United States)

    García-López, Erika; Olvera-Trejo, Daniel; Velásquez-García, Luis F.

    2017-10-01

    We report the design, fabrication, and characterization of novel, low-cost, and modular miniaturized nanofiber electrospinning sources for the scalable production of non-woven aligned nanofiber mats with low diameter variation. The devices are monolithic arrays of electrospinning emitters made via stereolithography; the emitters are arranged so each element has an independent line of sight to a rotating collector surface. Linear and zigzag emitter packing were evaluated using a PEO solution with the aim of maximizing the throughput of nanofibers with the smallest diameter and narrowest distribution. Current versus flowrate characterization of the devices showed that for a given flowrate a zigzag array produces more current per emitter than a linear array of the same emitter pitch and array size. In addition, the data demonstrate that larger and denser arrays have a net gain in flow rate per unit of active length. Visual inspection of the devices suggests uniform operation in devices with as many as 17 emitters with 300 μm inner diameter and 1.5 mm emitter gap. Well-aligned nanofiber mats were collected on a rotating drum and characterized; the 17-emitter device produced the same narrow nanofiber distribution (˜81 nm average diameter, ˜17 nm standard deviation) for all tested flow rates, which is strikingly different to the performance shown by 1-emitter sources where the average fiber diameter significantly increased and the statistics notably widened when the flowrate increases. Therefore, the data demonstrate that massively multiplexing the emitters is a viable approach to greatly increase the throughput of non-woven aligned nanofiber mats without sacrificing the statistics of the nanofibers generated. The production of dry nanofibers by the 17-emitter array is estimated at 33.0 mg min-1 (1.38 mg min-1 per mm of active length), which compares favorably with the reported multiplexed electrospinning arrays with emitters distributed along a line.

  19. Holovideo: Real-time 3D range video encoding and decoding on GPU

    Science.gov (United States)

    Karpinsky, Nikolaus; Zhang, Song

    2012-02-01

    We present a 3D video-encoding technique called Holovideo that is capable of encoding high-resolution 3D videos into standard 2D videos, and then decoding the 2D videos back into 3D rapidly without significant loss of quality. Due to the nature of the algorithm, 2D video compression such as JPEG encoding with QuickTime Run Length Encoding (QTRLE) can be applied with little quality loss, resulting in an effective way to store 3D video at very small file sizes. We found that under a compression ratio of 134:1, Holovideo to OBJ file format, the 3D geometry quality drops at a negligible level. Several sets of 3D videos were captured using a structured light scanner, compressed using the Holovideo codec, and then uncompressed and displayed to demonstrate the effectiveness of the codec. With the use of OpenGL Shaders (GLSL), the 3D video codec can encode and decode in realtime. We demonstrated that for a video size of 512×512, the decoding speed is 28 frames per second (FPS) with a laptop computer using an embedded NVIDIA GeForce 9400 m graphics processing unit (GPU). Encoding can be done with this same setup at 18 FPS, making this technology suitable for applications such as interactive 3D video games and 3D video conferencing.

  20. A recipe for consistent 3D management of velocity data and time-depth conversion using Vel-IO 3D

    Science.gov (United States)

    Maesano, Francesco E.; D'Ambrogi, Chiara

    2017-04-01

    3D geological model production and related basin analyses need large and consistent seismic dataset and hopefully well logs to support correlation and calibration; the workflow and tools used to manage and integrate different type of data control the soundness of the final 3D model. Even though seismic interpretation is a basic early step in such workflow, the most critical step to obtain a comprehensive 3D model useful for further analyses is represented by the construction of an effective 3D velocity model and a well constrained time-depth conversion. We present a complex workflow that includes comprehensive management of large seismic dataset and velocity data, the construction of a 3D instantaneous multilayer-cake velocity model, the time-depth conversion of highly heterogeneous geological framework, including both depositional and structural complexities. The core of the workflow is the construction of the 3D velocity model using Vel-IO 3D tool (Maesano and D'Ambrogi, 2017; https://github.com/framae80/Vel-IO3D) that is composed by the following three scripts, written in Python 2.7.11 under ArcGIS ArcPy environment: i) the 3D instantaneous velocity model builder creates a preliminary 3D instantaneous velocity model using key horizons in time domain and velocity data obtained from the analysis of well and pseudo-well logs. The script applies spatial interpolation to the velocity parameters and calculates the value of depth of each point on each horizon bounding the layer-cake velocity model. ii) the velocity model optimizer improves the consistency of the velocity model by adding new velocity data indirectly derived from measured depths, thus reducing the geometrical uncertainties in the areas located far from the original velocity data. iii) the time-depth converter runs the time-depth conversion of any object located inside the 3D velocity model The Vel-IO 3D tool allows one to create 3D geological models consistent with the primary geological constraints (e

  1. A Spatial Reference Grid for Real-Time Autonomous Underwater Modeling using 3-D Sonar

    Energy Technology Data Exchange (ETDEWEB)

    Auran, P.G.

    1996-12-31

    The offshore industry has recognized the need for intelligent underwater robotic vehicles. This doctoral thesis deals with autonomous underwater vehicles (AUVs) and concentrates on a data representation for real-time image formation and analysis. Its main objective is to develop a 3-D image representation suitable for autonomous perception objectives underwater, assuming active sonar as the main sensor for perception. The main contributions are: (1) A dynamical image representation for 3-D range data, (2) A basic electronic circuit and software system for 3-D sonar sampling and amplitude thresholding, (3) A model for target reliability, (4) An efficient connected components algorithm for 3-D segmentation, (5) A method for extracting general 3-D geometrical representations from segmented echo clusters, (6) Experimental results of planar and curved target modeling. 142 refs., 120 figs., 10 tabs.

  2. Real Time 3D Facial Movement Tracking Using a Monocular Camera

    Directory of Open Access Journals (Sweden)

    Yanchao Dong

    2016-07-01

    Full Text Available The paper proposes a robust framework for 3D facial movement tracking in real time using a monocular camera. It is designed to estimate the 3D face pose and local facial animation such as eyelid movement and mouth movement. The framework firstly utilizes the Discriminative Shape Regression method to locate the facial feature points on the 2D image and fuses the 2D data with a 3D face model using Extended Kalman Filter to yield 3D facial movement information. An alternating optimizing strategy is adopted to fit to different persons automatically. Experiments show that the proposed framework could track the 3D facial movement across various poses and illumination conditions. Given the real face scale the framework could track the eyelid with an error of 1 mm and mouth with an error of 2 mm. The tracking result is reliable for expression analysis or mental state inference.

  3. 3D Flash LIDAR Real-Time Embedded Processing, Phase II

    Data.gov (United States)

    National Aeronautics and Space Administration — 3D Flash LIDAR (3DFL) is ideal for determining real-time spacecraft trajectory, speed and orientation to the planet surface, as well as evaluating potential hazards...

  4. Time of arrival 3-D position estimation using minimum ADS-B ...

    African Journals Online (AJOL)

    The location from which a signal is transmitted can be estimated using the time it takes to be detected at a receiver. The difference between transmission time and the detection time is known as time of arrival (TOA). In this work, an algorithm for 3-dimensional (3-D) position estimation (PE) of an emitter using the minimum ...

  5. Real-time 3-D space numerical shake prediction for earthquake early warning

    Science.gov (United States)

    Wang, Tianyun; Jin, Xing; Huang, Yandan; Wei, Yongxiang

    2017-12-01

    In earthquake early warning systems, real-time shake prediction through wave propagation simulation is a promising approach. Compared with traditional methods, it does not suffer from the inaccurate estimation of source parameters. For computation efficiency, wave direction is assumed to propagate on the 2-D surface of the earth in these methods. In fact, since the seismic wave propagates in the 3-D sphere of the earth, the 2-D space modeling of wave direction results in inaccurate wave estimation. In this paper, we propose a 3-D space numerical shake prediction method, which simulates the wave propagation in 3-D space using radiative transfer theory, and incorporate data assimilation technique to estimate the distribution of wave energy. 2011 Tohoku earthquake is studied as an example to show the validity of the proposed model. 2-D space model and 3-D space model are compared in this article, and the prediction results show that numerical shake prediction based on 3-D space model can estimate the real-time ground motion precisely, and overprediction is alleviated when using 3-D space model.

  6. An Iterative Interplanetary Scintillation (IPS) Analysis Using Time-dependent 3-D MHD Models as Kernels

    Science.gov (United States)

    Jackson, B. V.; Yu, H. S.; Hick, P. P.; Buffington, A.; Odstrcil, D.; Kim, T. K.; Pogorelov, N. V.; Tokumaru, M.; Bisi, M. M.; Kim, J.; Yun, J.

    2017-12-01

    The University of California, San Diego has developed an iterative remote-sensing time-dependent three-dimensional (3-D) reconstruction technique which provides volumetric maps of density, velocity, and magnetic field. We have applied this technique in near real time for over 15 years with a kinematic model approximation to fit data from ground-based interplanetary scintillation (IPS) observations. Our modeling concept extends volumetric data from an inner boundary placed above the Alfvén surface out to the inner heliosphere. We now use this technique to drive 3-D MHD models at their inner boundary and generate output 3-D data files that are fit to remotely-sensed observations (in this case IPS observations), and iterated. These analyses are also iteratively fit to in-situ spacecraft measurements near Earth. To facilitate this process, we have developed a traceback from input 3-D MHD volumes to yield an updated boundary in density, temperature, and velocity, which also includes magnetic-field components. Here we will show examples of this analysis using the ENLIL 3D-MHD and the University of Alabama Multi-Scale Fluid-Kinetic Simulation Suite (MS-FLUKSS) heliospheric codes. These examples help refine poorly-known 3-D MHD variables (i.e., density, temperature), and parameters (gamma) by fitting heliospheric remotely-sensed data between the region near the solar surface and in-situ measurements near Earth.

  7. 3D parallel inversion of time-domain airborne EM data

    Science.gov (United States)

    Liu, Yun-He; Yin, Chang-Chun; Ren, Xiu-Yan; Qiu, Chang-Kai

    2016-12-01

    To improve the inversion accuracy of time-domain airborne electromagnetic data, we propose a parallel 3D inversion algorithm for airborne EM data based on the direct Gauss-Newton optimization. Forward modeling is performed in the frequency domain based on the scattered secondary electrical field. Then, the inverse Fourier transform and convolution of the transmitting waveform are used to calculate the EM responses and the sensitivity matrix in the time domain for arbitrary transmitting waves. To optimize the computational time and memory requirements, we use the EM "footprint" concept to reduce the model size and obtain the sparse sensitivity matrix. To improve the 3D inversion, we use the OpenMP library and parallel computing. We test the proposed 3D parallel inversion code using two synthetic datasets and a field dataset. The time-domain airborne EM inversion results suggest that the proposed algorithm is effective, efficient, and practical.

  8. PRIMAS: a real-time 3D motion-analysis system

    Science.gov (United States)

    Sabel, Jan C.; van Veenendaal, Hans L. J.; Furnee, E. Hans

    1994-03-01

    The paper describes a CCD TV-camera-based system for real-time multicamera 2D detection of retro-reflective targets and software for accurate and fast 3D reconstruction. Applications of this system can be found in the fields of sports, biomechanics, rehabilitation research, and various other areas of science and industry. The new feature of real-time 3D opens an even broader perspective of application areas; animations in virtual reality are an interesting example. After presenting an overview of the hardware and the camera calibration method, the paper focuses on the real-time algorithms used for matching of the images and subsequent 3D reconstruction of marker positions. When using a calibrated setup of two cameras, it is now possible to track at least ten markers at 100 Hz. Limitations in the performance are determined by the visibility of the markers, which could be improved by adding a third camera.

  9. Using a single RGB frame for real time 3D hand pose estimation in the wild

    OpenAIRE

    Panteleris, Paschalis; Oikonomidis, Iason; Argyros, Antonis

    2017-01-01

    We present a method for the real-time estimation of the full 3D pose of one or more human hands using a single commodity RGB camera. Recent work in the area has displayed impressive progress using RGBD input. However, since the introduction of RGBD sensors, there has been little progress for the case of monocular color input. We capitalize on the latest advancements of deep learning, combining them with the power of generative hand pose estimation techniques to achieve real-time monocular 3D ...

  10. 3D Hand Gesture Analysis through a Real-Time Gesture Search Engine

    Directory of Open Access Journals (Sweden)

    Shahrouz Yousefi

    2015-06-01

    Full Text Available 3D gesture recognition and tracking are highly desired features of interaction design in future mobile and smart environments. Specifically, in virtual/augmented reality applications, intuitive interaction with the physical space seems unavoidable and 3D gestural interaction might be the most effective alternative for the current input facilities such as touchscreens. In this paper, we introduce a novel solution for real-time 3D gesture-based interaction by finding the best match from an extremely large gesture database. This database includes images of various articulated hand gestures with the annotated 3D position/orientation parameters of the hand joints. Our unique matching algorithm is based on the hierarchical scoring of the low-level edge-orientation features between the query frames and database and retrieving the best match. Once the best match is found from the database in each moment, the pre-recorded 3D motion parameters can instantly be used for natural interaction. The proposed bare-hand interaction technology performs in real time with high accuracy using an ordinary camera.

  11. Time-varying multiplex network: Intralayer and interlayer synchronization

    Science.gov (United States)

    Rakshit, Sarbendu; Majhi, Soumen; Bera, Bidesh K.; Sinha, Sudeshna; Ghosh, Dibakar

    2017-12-01

    A large class of engineered and natural systems, ranging from transportation networks to neuronal networks, are best represented by multiplex network architectures, namely a network composed of two or more different layers where the mutual interaction in each layer may differ from other layers. Here we consider a multiplex network where the intralayer coupling interactions are switched stochastically with a characteristic frequency. We explore the intralayer and interlayer synchronization of such a time-varying multiplex network. We find that the analytically derived necessary condition for intralayer and interlayer synchronization, obtained by the master stability function approach, is in excellent agreement with our numerical results. Interestingly, we clearly find that the higher frequency of switching links in the layers enhances both intralayer and interlayer synchrony, yielding larger windows of synchronization. Further, we quantify the resilience of synchronous states against random perturbations, using a global stability measure based on the concept of basin stability, and this reveals that intralayer coupling strength is most crucial for determining both intralayer and interlayer synchrony. Lastly, we investigate the robustness of interlayer synchronization against a progressive demultiplexing of the multiplex structure, and we find that for rapid switching of intralayer links, the interlayer synchronization persists even when a large number of interlayer nodes are disconnected.

  12. Enhancement of Online Robotics Learning Using Real-Time 3D Visualization Technology

    Directory of Open Access Journals (Sweden)

    Richard Chiou

    2010-06-01

    Full Text Available This paper discusses a real-time e-Lab Learning system based on the integration of 3D visualization technology with a remote robotic laboratory. With the emergence and development of the Internet field, online learning is proving to play a significant role in the upcoming era. In an effort to enhance Internet-based learning of robotics and keep up with the rapid progression of technology, a 3- Dimensional scheme of viewing the robotic laboratory has been introduced in addition to the remote controlling of the robots. The uniqueness of the project lies in making this process Internet-based, and remote robot operated and visualized in 3D. This 3D system approach provides the students with a more realistic feel of the 3D robotic laboratory even though they are working remotely. As a result, the 3D visualization technology has been tested as part of a laboratory in the MET 205 Robotics and Mechatronics class and has received positive feedback by most of the students. This type of research has introduced a new level of realism and visual communications to online laboratory learning in a remote classroom.

  13. Real-time Stereoscopic 3D for E-Robotics Learning

    Directory of Open Access Journals (Sweden)

    Richard Y. Chiou

    2011-02-01

    Full Text Available Following the design and testing of a successful 3-Dimensional surveillance system, this 3D scheme has been implemented into online robotics learning at Drexel University. A real-time application, utilizing robot controllers, programmable logic controllers and sensors, has been developed in the “MET 205 Robotics and Mechatronics” class to provide the students with a better robotic education. The integration of the 3D system allows the students to precisely program the robot and execute functions remotely. Upon the students’ recommendation, polarization has been chosen to be the main platform behind the 3D robotic system. Stereoscopic calculations are carried out for calibration purposes to display the images with the highest possible comfort-level and 3D effect. The calculations are further validated by comparing the results with students’ evaluations. Due to the Internet-based feature, multiple clients have the opportunity to perform the online automation development. In the future, students, in different universities, will be able to cross-control robotic components of different types around the world. With the development of this 3D ERobotics interface, automation resources and robotic learning can be shared and enriched regardless of location.

  14. Improvements of the 3D images captured with Time-of-Flight cameras

    OpenAIRE

    Falie, D.

    2009-01-01

    3D Time-of-Flight camera's images are affected by errors due to the diffuse (indirect) light and to the flare light. The presented method improves the 3D image reducing the distance's errors to dark surface objects. This is achieved by placing one or two contrast tags in the scene at different distances from the ToF camera. The white and black parts of the tags are situated at the same distance to the camera but the distances measured by the camera are different. This difference is used to co...

  15. Real-time interactive 3D manipulation of particles viewed in two orthogonal observation planes

    DEFF Research Database (Denmark)

    Perch-Nielsen, I.; Rodrigo, P.J.; Glückstad, J.

    2005-01-01

    The generalized phase contrast (GPC) method has been applied to transform a single TEM00 beam into a manifold of counterpropagating-beam traps capable of real-time interactive manipulation of multiple microparticles in three dimensions (3D). This paper reports on the use of low numerical aperture...... (NA), non-immersion, objective lenses in an implementation of the GPC-based 3D trapping system. Contrary to high-NA based optical tweezers, the GPC trapping system demonstrated here operates with long working distance (>10 mm), and offers a wider manipulation region and a larger field of view...

  16. 3D real-time monitoring system for LHD plasma heating experiment

    International Nuclear Information System (INIS)

    Emoto, M.; Narlo, J.; Kaneko, O.; Komori, A.; Iima, M.; Yamaguchi, S.; Sudo, S.

    2001-01-01

    The JAVA-based real-time monitoring system has been in use at the National Institute for Fusion Science, Japan, since the end of March 1988 to maintain stable operations. This system utilizes JAVA technology to realize its platform-independent nature. The main programs are written as JAVA applets and provide human-friendly interfaces. In order to enhance the system's easy-recognition nature, a 3D feature is added. Since most of the system is written mainly in JAVA language, we adopted JAVA3D technology, which was easy to incorporate into the current running systems. With this 3D feature, the operator can more easily find the malfunctioning parts of complex instruments, such as LHD vacuum vessels. This feature is also helpful for recognizing physical phenomena. In this paper, we present an example in which the temperature increases of a vacuum vessel after NBI are visualized

  17. A New Approach to Time-Resolved 3D-PTV

    Science.gov (United States)

    Boomsma, Aaron; Troolin, Dan; Bjorkquist, Dan; TSI Inc Team

    2017-11-01

    Volumetric three-component velocimetry via particle tracking is a powerful alternative to TomoPIV. It has been thoroughly documented that compared to TomoPIV, particle tracking velocimetry (PTV) methods (whether 2D or 3D) better resolve regions of high velocity gradient, identify fewer ghost particles, and are less computationally demanding, which results in shorter processing times. Recently, 3D-PTV has seen renewed interest in the PIV community with the availability of time-resolved data. Of course, advances in hardware are partly to thank for that availability-higher speed cameras, more effective memory management, and higher speed lasers. But in software, algorithms that utilize time resolved data to improve 3D particle reconstruction and particle tracking are also under development and advancing (e.g. shake-the-box, neighbor tracking reconstruction, etc.). .In the current study, we present a new 3D-PTV method that incorporates time-resolved data. We detail the method, its performance in terms of particle identification and reconstruction error and their relation to varying seeding densities, as well as computational performance.

  18. Quantitative analysis of pulmonary perfusion using time-resolved parallel 3D MRI - initial results

    International Nuclear Information System (INIS)

    Fink, C.; Buhmann, R.; Plathow, C.; Puderbach, M.; Kauczor, H.U.; Risse, F.; Ley, S.; Meyer, F.J.

    2004-01-01

    Purpose: to assess the use of time-resolved parallel 3D MRI for a quantitative analysis of pulmonary perfusion in patients with cardiopulmonary disease. Materials and methods: eight patients with pulmonary embolism or pulmonary hypertension were examined with a time-resolved 3D gradient echo pulse sequence with parallel imaging techniques (FLASH 3D, TE/TR: 0.8/1.9 ms; flip angle: 40 ; GRAPPA). A quantitative perfusion analysis based on indicator dilution theory was performed using a dedicated software. Results: patients with pulmonary embolism or chronic thromboembolic pulmonary hypertension revealed characteristic wedge-shaped perfusion defects at perfusion MRI. They were characterized by a decreased pulmonary blood flow (PBF) and pulmonary blood volume (PBV) and increased mean transit time (MTT). Patients with primary pulmonary hypertension or eisenmenger syndrome showed a more homogeneous perfusion pattern. The mean MTT of all patients was 3.3 - 4.7 s. The mean PBF and PBV showed a broader interindividual variation (PBF: 104-322 ml/100 ml/min; PBV: 8 - 21 ml/100 ml). Conclusion: time-resolved parallel 3D MRI allows at least a semi-quantitative assessment of lung perfusion. Future studies will have to assess the clinical value of this quantitative information for the diagnosis and management of cardiopulmonary disease. (orig.) [de

  19. QuickPALM: 3D real-time photoactivation nanoscopy image processing in ImageJ

    CSIR Research Space (South Africa)

    Henriques, R

    2010-05-01

    Full Text Available QuickPALM in conjunction with the acquisition of control features provides a complete solution for the acquisition, reconstruction and visualization of 3D PALM or STORM images, achieving resolutions of ~40 nm in real time. This software package...

  20. A Comparison of Iterative 2D-3D Pose Estimation Methods for Real-Time Applications

    DEFF Research Database (Denmark)

    Grest, Daniel; Krüger, Volker; Petersen, Thomas

    2009-01-01

    This work compares iterative 2D-3D Pose Estimation methods for use in real-time applications. The compared methods are available for public as C++ code. One method is part of the openCV library, namely POSIT. Because POSIT is not applicable for planar 3Dpoint congurations, we include the planar...

  1. Generalized Hough transform based time invariant action recognition with 3D pose information

    Science.gov (United States)

    Muench, David; Huebner, Wolfgang; Arens, Michael

    2014-10-01

    Human action recognition has emerged as an important field in the computer vision community due to its large number of applications such as automatic video surveillance, content based video-search and human robot interaction. In order to cope with the challenges that this large variety of applications present, recent research has focused more on developing classifiers able to detect several actions in more natural and unconstrained video sequences. The invariance discrimination tradeoff in action recognition has been addressed by utilizing a Generalized Hough Transform. As a basis for action representation we transform 3D poses into a robust feature space, referred to as pose descriptors. For each action class a one-dimensional temporal voting space is constructed. Votes are generated from associating pose descriptors with their position in time relative to the end of an action sequence. Training data consists of manually segmented action sequences. In the detection phase valid human 3D poses are assumed as input, e.g. originating from 3D sensors or monocular pose reconstruction methods. The human 3D poses are normalized to gain view-independence and transformed into (i) relative limb-angle space to ensure independence of non-adjacent joints or (ii) geometric features. In (i) an action descriptor consists of the relative angles between limbs and their temporal derivatives. In (ii) the action descriptor consists of different geometric features. In order to circumvent the problem of time-warping we propose to use a codebook of prototypical 3D poses which is generated from sample sequences of 3D motion capture data. This idea is in accordance with the concept of equivalence classes in action space. Results of the codebook method are presented using the Kinect sensor and the CMU Motion Capture Database.

  2. Rigorous accuracy assessment for 3D reconstruction using time-series Dual Fluoroscopy (DF) image pairs

    Science.gov (United States)

    Al-Durgham, Kaleel; Lichti, Derek D.; Kuntze, Gregor; Ronsky, Janet

    2017-06-01

    High-speed biplanar videoradiography, or clinically referred to as dual fluoroscopy (DF), imaging systems are being used increasingly for skeletal kinematics analysis. Typically, a DF system comprises two X-ray sources, two image intensifiers and two high-speed video cameras. The combination of these elements provides time-series image pairs of articulating bones of a joint, which permits the measurement of bony rotation and translation in 3D at high temporal resolution (e.g., 120-250 Hz). Assessment of the accuracy of 3D measurements derived from DF imaging has been the subject of recent research efforts by several groups, however with methodological limitations. This paper presents a novel and simple accuracy assessment procedure based on using precise photogrammetric tools. We address the fundamental photogrammetry principles for the accuracy evaluation of an imaging system. Bundle adjustment with selfcalibration is used for the estimation of the system parameters. The bundle adjustment calibration uses an appropriate sensor model and applies free-network constraints and relative orientation stability constraints for a precise estimation of the system parameters. A photogrammetric intersection of time-series image pairs is used for the 3D reconstruction of a rotating planar object. A point-based registration method is used to combine the 3D coordinates from the intersection and independently surveyed coordinates. The final DF accuracy measure is reported as the distance between 3D coordinates from image intersection and the independently surveyed coordinates. The accuracy assessment procedure is designed to evaluate the accuracy over the full DF image format and a wide range of object rotation. Experiment of reconstruction of a rotating planar object reported an average positional error of 0.44 +/- 0.2 mm in the derived 3D coordinates (minimum 0.05 and maximum 1.2 mm).

  3. Automated simulation and evaluation of autostereoscopic multiview 3D display designs by time-sequential and wavelength-selective filter barrier

    Science.gov (United States)

    Kuhlmey, Mathias; Jurk, Silvio; Duckstein, Bernd; de la Barré, René

    2015-09-01

    A novel simulation tool has been developed for spatial multiplexed 3D displays. Main purpose of our software is the 3D display design with optical image splitter in particular lenticular grids or wavelength-selective barriers. As a result of interaction of image splitter with ray emitting displays a spatial light-modulator generating the autostereoscopic image representation was modeled. Based on the simulation model the interaction of optoelectronic devices with the defined spatial planes is described. Time-sequential multiplexing enables increasing the resolution of such 3D displays. On that reason the program was extended with an intermediate data cumulating component. The simulation program represents a stepwise quasi-static functionality and control of the arrangement. It calculates and renders the whole display ray emission and luminance distribution on viewing distance. The degree of result complexity will increase by using wavelength-selective barriers. Visible images at the viewer's eye positon were determined by simulation after every switching operation of optical image splitter. The summation and evaluation of the resulting data is processed in correspondence to the equivalent time sequence. Hereby the simulation was expanded by a complex algorithm for automated search and validation of possible solutions in the multi-dimensional parameter space. For the multiview 3D display design a combination of ray-tracing and 3D rendering was used. Therefore the emitted light intensity distribution of each subpixel will be evaluated by researching in terms of color, luminance and visible area by using different content distribution on subpixel plane. The analysis of the accumulated data will deliver different solutions distinguished by standards of evaluation.

  4. 3D photography is a reliable method of measuring infantile haemangioma volume over time.

    Science.gov (United States)

    Robertson, Sarah A; Kimble, Roy M; Storey, Kristen J; Gee Kee, Emma L; Stockton, Kellie A

    2016-09-01

    Infantile haemangiomas are common lesions of infancy. With the development of novel treatments utilised to accelerate their regression, there is a need for a method of assessing these lesions over time. Volume is an ideal assessment method because of its quantifiable nature. This study investigated whether 3D photography is a valid tool for measuring the volume of infantile haemangiomas over time. Thirteen children with infantile haemangiomas presenting to the Vascular Anomalies Clinic, Royal Children's Hospital/Lady Cilento Children's Hospital treated with propranolol were included in the study. Lesion volume was assessed using 3D photography at presentation, one month and three months follow up. Intrarater reliability was determined by retracing all images several months after the initial mapping. Interrater reliability of the 3D camera software was determined by two investigators, blinded to each other's results, independently assessing infantile haemangioma volume. Lesion volume decreased significantly between presentation and three-month follow-up (p<0.001). Volume intra- and interrater reliability were excellent with ICC 0.991 (95% CI 0.982, 0.995) and 0.978 (95% CI 0.955, 0.989), respectively. This study demonstrates images taken with the 3D LifeViz™ camera and lesion volume calculated with Dermapix® software is a reliable method for assessing infantile haemangioma volume over time. Copyright © 2016 Elsevier Inc. All rights reserved.

  5. Time-to-digital converter based on analog time expansion for 3D time-of-flight cameras

    Science.gov (United States)

    Tanveer, Muhammad; Nissinen, Ilkka; Nissinen, Jan; Kostamovaara, Juha; Borg, Johan; Johansson, Jonny

    2014-03-01

    This paper presents an architecture and achievable performance for a time-to-digital converter, for 3D time-of-flight cameras. This design is partitioned in two levels. In the first level, an analog time expansion, where the time interval to be measured is stretched by a factor k, is achieved by charging a capacitor with current I, followed by discharging the capacitor with a current I/k. In the second level, the final time to digital conversion is performed by a global gated ring oscillator based time-to-digital converter. The performance can be increased by exploiting its properties of intrinsic scrambling of quantization noise and mismatch error, and first order noise shaping. The stretched time interval is measured by counting full clock cycles and storing the states of nine phases of the gated ring oscillator. The frequency of the gated ring oscillator is approximately 131 MHz, and an appropriate stretch factor k, can give a resolution of ≍ 57 ps. The combined low nonlinearity of the time stretcher and the gated ring oscillator-based time-to-digital converter can achieve a distance resolution of a few centimeters with low power consumption and small area occupation. The carefully optimized circuit configuration achieved by using an edge aligner, the time amplification property and the gated ring oscillator-based time-to-digital converter may lead to a compact, low power single photon configuration for 3D time-of-flight cameras, aimed for a measurement range of 10 meters.

  6. Time-lapse seismic - repeatability versus usefulness and 2D versus 3D

    Science.gov (United States)

    Landro, M.

    2017-12-01

    Time-lapse seismic has developed rapidly over the past decades, especially for monitoring of oil and gas reservoirs and subsurface storage of CO2. I will review and discuss some of the critical enabling factors for the commercial success of this technology. It was early realized that how well we are able to repeat our seismic experiment is crucial. However, it is always a question of detectability versus repeatability. For marine seismic, there are several factors limiting the repeatability: Weather conditions, positioning of sources and receivers and so on. I will discuss recent improvements in both acquisition and processing methods over the last decade. It is well known that repeated 3D seismic data is the most accurate tool for reservoir monitoring purposes. However, several examples show that 2D seismic data may be used for monitoring purposes despite lower repeatability. I will use examples from an underground blow out in the North Sea, and repeated 2D seismic lines acquired before and after the Tohoku earthquake in 2011 to illustrate this. A major challenge when using repeated 2D seismic for subsurface monitoring purposes is the lack of 3D calibration points and significantly less amount of data. For marine seismic acquisition, feathering issues and crossline dip effects become more critical compared to 3D seismic acquisition. Furthermore, the uncertainties arising from a non-ideal 2D seismic acquisition are hard to assess, since the 3D subsurface geometry has not been mapped. One way to shed more light on this challenge is to use 3D time lapse seismic modeling testing various crossline dips or geometries. Other ways are to use alternative data sources, such as bathymetry, time lapse gravity or electromagnetic data. The end result for all time-lapse monitoring projects is an interpretation associated with uncertainties, and for the 2D case these uncertainties are often large. The purpose of this talk is to discuss how to reduces and control these

  7. Ultra-Wideband Time-Difference-of-Arrival High Resolution 3D Proximity Tracking System

    Science.gov (United States)

    Ni, Jianjun; Arndt, Dickey; Ngo, Phong; Phan, Chau; Dekome, Kent; Dusl, John

    2010-01-01

    This paper describes a research and development effort for a prototype ultra-wideband (UWB) tracking system that is currently under development at NASA Johnson Space Center (JSC). The system is being studied for use in tracking of lunar./Mars rovers and astronauts during early exploration missions when satellite navigation systems are not available. U IATB impulse radio (UWB-IR) technology is exploited in the design and implementation of the prototype location and tracking system. A three-dimensional (3D) proximity tracking prototype design using commercially available UWB products is proposed to implement the Time-Difference- Of-Arrival (TDOA) tracking methodology in this research effort. The TDOA tracking algorithm is utilized for location estimation in the prototype system, not only to exploit the precise time resolution possible with UWB signals, but also to eliminate the need for synchronization between the transmitter and the receiver. Simulations show that the TDOA algorithm can achieve the fine tracking resolution with low noise TDOA estimates for close-in tracking. Field tests demonstrated that this prototype UWB TDOA High Resolution 3D Proximity Tracking System is feasible for providing positioning-awareness information in a 3D space to a robotic control system. This 3D tracking system is developed for a robotic control system in a facility called "Moonyard" at Honeywell Defense & System in Arizona under a Space Act Agreement.

  8. 3D Time-lapse Imaging and Quantification of Mitochondrial Dynamics

    OpenAIRE

    Sison, Miguel; Chakrabortty, Sabyasachi; Extermann, J?r?me; Nahas, Amir; James Marchand, Paul; Lopez, Antonio; Weil, Tanja; Lasser, Theo

    2017-01-01

    We present a 3D time-lapse imaging method for monitoring mitochondrial dynamics in living HeLa cells based on photothermal optical coherence microscopy and using novel surface functionalization of gold nanoparticles. The biocompatible protein-based biopolymer coating contains multiple functional groups which impart better cellular uptake and mitochondria targeting efficiency. The high stability of the gold nanoparticles allows continuous imaging over an extended time up to 3000 seconds withou...

  9. A Review on Real-Time 3D Ultrasound Imaging Technology

    Directory of Open Access Journals (Sweden)

    Qinghua Huang

    2017-01-01

    Full Text Available Real-time three-dimensional (3D ultrasound (US has attracted much more attention in medical researches because it provides interactive feedback to help clinicians acquire high-quality images as well as timely spatial information of the scanned area and hence is necessary in intraoperative ultrasound examinations. Plenty of publications have been declared to complete the real-time or near real-time visualization of 3D ultrasound using volumetric probes or the routinely used two-dimensional (2D probes. So far, a review on how to design an interactive system with appropriate processing algorithms remains missing, resulting in the lack of systematic understanding of the relevant technology. In this article, previous and the latest work on designing a real-time or near real-time 3D ultrasound imaging system are reviewed. Specifically, the data acquisition techniques, reconstruction algorithms, volume rendering methods, and clinical applications are presented. Moreover, the advantages and disadvantages of state-of-the-art approaches are discussed in detail.

  10. ArtifactVis2: Managing real-time archaeological data in immersive 3D environments

    KAUST Repository

    Smith, Neil

    2013-10-01

    In this paper, we present a stereoscopic research and training environment for archaeologists called ArtifactVis2. This application enables the management and visualization of diverse types of cultural datasets within a collaborative virtual 3D system. The archaeologist is fully immersed in a large-scale visualization of on-going excavations. Massive 3D datasets are seamlessly rendered in real-time with field recorded GIS data, 3D artifact scans and digital photography. Dynamic content can be visualized and cultural analytics can be performed on archaeological datasets collected through a rigorous digital archaeological methodology. The virtual collaborative environment provides a menu driven query system and the ability to annotate, markup, measure, and manipulate any of the datasets. These features enable researchers to re-experience and analyze the minute details of an archaeological site\\'s excavation. It enhances their visual capacity to recognize deep patterns and structures and perceive changes and reoccurrences. As a complement and development from previous work in the field of 3D immersive archaeological environments, ArtifactVis2 provides a GIS based immersive environment that taps directly into archaeological datasets to investigate cultural and historical issues of ancient societies and cultural heritage in ways not possible before. © 2013 IEEE.

  11. Autonomous real-time interventional scan plane control with a 3-D shape-sensing needle.

    Science.gov (United States)

    Elayaperumal, Santhi; Plata, Juan Camilo; Holbrook, Andrew B; Park, Yong-Lae; Pauly, Kim Butts; Daniel, Bruce L; Cutkosky, Mark R

    2014-11-01

    This study demonstrates real-time scan plane control dependent on three-dimensional needle bending, as measured from magnetic resonance imaging (MRI)-compatible optical strain sensors. A biopsy needle with embedded fiber Bragg grating (FBG) sensors to measure surface strains is used to estimate its full 3-D shape and control the imaging plane of an MR scanner in real-time, based on the needle's estimated profile. The needle and scanner coordinate frames are registered to each other via miniature radio-frequency (RF) tracking coils, and the scan planes autonomously track the needle as it is deflected, keeping its tip in view. A 3-D needle annotation is superimposed over MR-images presented in a 3-D environment with the scanner's frame of reference. Scan planes calculated based on the FBG sensors successfully follow the tip of the needle. Experiments using the FBG sensors and RF coils to track the needle shape and location in real-time had an average root mean square error of 4.2 mm when comparing the estimated shape to the needle profile as seen in high resolution MR images. This positional variance is less than the image artifact caused by the needle in high resolution SPGR (spoiled gradient recalled) images. Optical fiber strain sensors can estimate a needle's profile in real-time and be used for MRI scan plane control to potentially enable faster and more accurate physician response.

  12. Real-time 3D dose calculation and display: a tool for plan optimization

    International Nuclear Information System (INIS)

    Matthews, John W.; Rosenberger, Fred U.; Bosch, Walter R.; Harms, William B.; Purdy, James A.

    1996-01-01

    Purpose: Both human and computer optimization of treatment plans have advantages; humans are much better at global pattern recognition, and computers are much better at detailed calculations. A major impediment to human optimization of treatment plans by manipulation of beam parameters is the long time required for feedback to the operator on the effectiveness of a change in beam parameters. Our goal was to create a real-time dose calculation and display system that provides the planner with immediate (fraction of a second) feedback with displays of three-dimensional (3D) isodose surfaces, digitally reconstructed radiographs (DRRs), dose-volume histograms, and/or a figure of merit (FOM) (i.e., a single value plan score function). This will allow the experienced treatment planner to optimize a plan by adjusting beam parameters based on a direct indication of plan effectiveness, the FOM value, and to use 3D display of target, critical organs, DRRs, and isodose contours to guide changes aimed at improving the FOM value. Methods and Materials: We use computer platforms that contain easily utilized parallel processors and very tight coupling between calculation and display. We ported code running on a network of two workstations and an array of transputers to a single multiprocessor workstation. Our current high-performance graphics workstation contains four 150-MHz processors that can be readily used in a shared-memory multithreaded calculation. Results: When a 10 x 10-cm beam is moved, using an 8-mm dose grid, the full 3D dose matrix is recalculated using a Bentley-Milan-type dose calculation algorithm, and the 3D dose surface display is then updated, all in < 0.1 s. A 64 x 64-pixel DRR calculation can be performed in < 0.1 s. Other features, such as automated aperture calculation, are still required to make real-time feedback practical for clinical use. Conclusion: We demonstrate that real-time plan optimization using general purpose multiprocessor workstations is a

  13. An active robot vision system for real-time 3-D structure recovery

    International Nuclear Information System (INIS)

    Juvin, D.

    1993-01-01

    This paper presents an active approach for the task of computing the 3-D structure of a nuclear plant environment from an image sequence, more precisely the recovery of the 3-D structure of cylindrical objects. Active vision is considered by computing adequate camera motions using image-based control laws. This approach requires a real-time tracking of the limbs of the cylinders. Therefore, an original matching approach, which relies on an algorithm for determining moving edges, is proposed. This method is distinguished by its robustness and its easiness to implement. This method has been implemented on a parallel image processing board and real-time performance has been achieved. The whole scheme has been successfully validated in an experimental set-up

  14. Real-time 3D radiation risk assessment supporting simulation of work in nuclear environments.

    Science.gov (United States)

    Szőke, I; Louka, M N; Bryntesen, T R; Bratteli, J; Edvardsen, S T; RøEitrheim, K K; Bodor, K

    2014-06-01

    This paper describes the latest developments at the Institute for Energy Technology (IFE) in Norway, in the field of real-time 3D (three-dimensional) radiation risk assessment for the support of work simulation in nuclear environments. 3D computer simulation can greatly facilitate efficient work planning, briefing, and training of workers. It can also support communication within and between work teams, and with advisors, regulators, the media and public, at all the stages of a nuclear installation's lifecycle. Furthermore, it is also a beneficial tool for reviewing current work practices in order to identify possible gaps in procedures, as well as to support the updating of international recommendations, dissemination of experience, and education of the current and future generation of workers.IFE has been involved in research and development into the application of 3D computer simulation and virtual reality (VR) technology to support work in radiological environments in the nuclear sector since the mid 1990s. During this process, two significant software tools have been developed, the VRdose system and the Halden Planner, and a number of publications have been produced to contribute to improving the safety culture in the nuclear industry.This paper describes the radiation risk assessment techniques applied in earlier versions of the VRdose system and the Halden Planner, for visualising radiation fields and calculating dose, and presents new developments towards implementing a flexible and up-to-date dosimetric package in these 3D software tools, based on new developments in the field of radiation protection. The latest versions of these 3D tools are capable of more accurate risk estimation, permit more flexibility via a range of user choices, and are applicable to a wider range of irradiation situations than their predecessors.

  15. Real-time 3D radiation risk assessment supporting simulation of work in nuclear environments

    International Nuclear Information System (INIS)

    Szoke, I; Louka, M N; Bryntesen, T R; Bratteli, J; Edvardsen, S T; RøEitrheim, K K; Bodor, K

    2014-01-01

    This paper describes the latest developments at the Institute for Energy Technology (IFE) in Norway, in the field of real-time 3D (three-dimensional) radiation risk assessment for the support of work simulation in nuclear environments. 3D computer simulation can greatly facilitate efficient work planning, briefing, and training of workers. It can also support communication within and between work teams, and with advisors, regulators, the media and public, at all the stages of a nuclear installation’s lifecycle. Furthermore, it is also a beneficial tool for reviewing current work practices in order to identify possible gaps in procedures, as well as to support the updating of international recommendations, dissemination of experience, and education of the current and future generation of workers. IFE has been involved in research and development into the application of 3D computer simulation and virtual reality (VR) technology to support work in radiological environments in the nuclear sector since the mid 1990s. During this process, two significant software tools have been developed, the VRdose system and the Halden Planner, and a number of publications have been produced to contribute to improving the safety culture in the nuclear industry. This paper describes the radiation risk assessment techniques applied in earlier versions of the VRdose system and the Halden Planner, for visualising radiation fields and calculating dose, and presents new developments towards implementing a flexible and up-to-date dosimetric package in these 3D software tools, based on new developments in the field of radiation protection. The latest versions of these 3D tools are capable of more accurate risk estimation, permit more flexibility via a range of user choices, and are applicable to a wider range of irradiation situations than their predecessors. (paper)

  16. A real-time 3D scanning system for pavement distortion inspection

    International Nuclear Information System (INIS)

    Li, Qingguang; Yao, Ming; Yao, Xun; Xu, Bugao

    2010-01-01

    Pavement distortions, such as rutting and shoving, are the common pavement distress problems that need to be inspected and repaired in a timely manner to ensure ride quality and traffic safety. This paper introduces a real-time, low-cost inspection system devoted to detecting these distress features using high-speed 3D transverse scanning techniques. The detection principle is the dynamic generation and characterization of the 3D pavement profile based on structured light triangulation. To improve the accuracy of the system, a multi-view coplanar scheme is employed in the calibration procedure so that more feature points can be used and distributed across the field of view of the camera. A sub-pixel line extraction method is applied for the laser stripe location, which includes filtering, edge detection and spline interpolation. The pavement transverse profile is then generated from the laser stripe curve and approximated by line segments. The second-order derivatives of the segment endpoints are used to identify the feature points of possible distortions. The system can output the real-time measurements and 3D visualization of rutting and shoving distress in a scanned pavement

  17. 2D array transducers for real-time 3D ultrasound guidance of interventional devices

    Science.gov (United States)

    Light, Edward D.; Smith, Stephen W.

    2009-02-01

    We describe catheter ring arrays for real-time 3D ultrasound guidance of devices such as vascular grafts, heart valves and vena cava filters. We have constructed several prototypes operating at 5 MHz and consisting of 54 elements using the W.L. Gore & Associates, Inc. micro-miniature ribbon cables. We have recently constructed a new transducer using a braided wiring technology from Precision Interconnect. This transducer consists of 54 elements at 4.8 MHz with pitch of 0.20 mm and typical -6 dB bandwidth of 22%. In all cases, the transducer and wiring assembly were integrated with an 11 French catheter of a Cook Medical deployment device for vena cava filters. Preliminary in vivo and in vitro testing is ongoing including simultaneous 3D ultrasound and x-ray fluoroscopy.

  18. GPU-based real-time generation of large ultrasound volumes from freehand 3D sweeps

    Directory of Open Access Journals (Sweden)

    Jauer Philipp

    2015-09-01

    Full Text Available In the recent past, 3D ultrasound has been gaining relevance in many biomedical applications. One main limitation, however, is that typical ultrasound volumes are either very poorly resolved or only cover small areas. We have developed a GPU-accelerated method for live fusion of freehand 3D ultrasound sweeps to create one large volume. The method has been implemented in CUDA and is capable of generating an output volume with 0.5 mm resolution in real time while processing more than 45 volumes per second, with more than 300.000 voxels per volume. First experiments indicate that large structures like a whole forearm or high-resolution volumes of smaller structures like the hand can be combined efficiently. It is anticipated that this technology will be helpful in pediatric surgery where X-ray or CT imaging is not always possible.

  19. Web GIS in practice V: 3-D interactive and real-time mapping in Second Life

    Directory of Open Access Journals (Sweden)

    Burden David

    2007-11-01

    Full Text Available Abstract This paper describes technologies from Daden Limited for geographically mapping and accessing live news stories/feeds, as well as other real-time, real-world data feeds (e.g., Google Earth KML feeds and GeoRSS feeds in the 3-D virtual world of Second Life, by plotting and updating the corresponding Earth location points on a globe or some other suitable form (in-world, and further linking those points to relevant information and resources. This approach enables users to visualise, interact with, and even walk or fly through, the plotted data in 3-D. Users can also do the reverse: put pins on a map in the virtual world, and then view the data points on the Web in Google Maps or Google Earth. The technologies presented thus serve as a bridge between mirror worlds like Google Earth and virtual worlds like Second Life. We explore the geo-data display potential of virtual worlds and their likely convergence with mirror worlds in the context of the future 3-D Internet or Metaverse, and reflect on the potential of such technologies and their future possibilities, e.g. their use to develop emergency/public health virtual situation rooms to effectively manage emergencies and disasters in real time. The paper also covers some of the issues associated with these technologies, namely user interface accessibility and individual privacy.

  20. Real-time 3D shape recording by DLP-based all-digital surface encoding

    Science.gov (United States)

    Höfling, Roland; Aswendt, Petra

    2009-02-01

    The use of computer generated sinusoidal fringe patterns has found wide acceptance in optical metrology. There are corresponding software solutions that reconstruct the phase field encoded in the fringe pattern in order to get 3D-shape data via triangulation and deflection measuring setups, respectively. Short recording time is a common issue of high importance for all tasks on the factory shop floor as well as in medical applications and for security. Recent high-speed implementations take advantage of MEMS based spatial light modulators and the digital micro mirror chipset DLP DiscoveryTM* is the fastest proven component currently available for this aim. Being a bi-stable on-off-state system, the sinusoidal gray level pictures are generated by controlling the mirrors ON-time period during which an analogue detector is exposed. This digital generation of light intensity distributions provides outstanding precision and long-term stability. It is used in leading edge technology solutions that produce video type streams of 3D surface data with a sustained repetition rate of 40 Hz. A new proposal is discussed in this paper that goes beyond this state of the art by considering the optical encoding of the surface as an all-digital communication link. After a brief classification of state-of- the-art systems, the authors describe how future all-digital encoding leads to extremely high speed and precision in 3D shape acquisition.

  1. 3D airborne EM modeling based on the spectral-element time-domain (SETD) method

    Science.gov (United States)

    Cao, X.; Yin, C.; Huang, X.; Liu, Y.; Zhang, B., Sr.; Cai, J.; Liu, L.

    2017-12-01

    In the field of 3D airborne electromagnetic (AEM) modeling, both finite-difference time-domain (FDTD) method and finite-element time-domain (FETD) method have limitations that FDTD method depends too much on the grids and time steps, while FETD requires large number of grids for complex structures. We propose a time-domain spectral-element (SETD) method based on GLL interpolation basis functions for spatial discretization and Backward Euler (BE) technique for time discretization. The spectral-element method is based on a weighted residual technique with polynomials as vector basis functions. It can contribute to an accurate result by increasing the order of polynomials and suppressing spurious solution. BE method is a stable tine discretization technique that has no limitation on time steps and can guarantee a higher accuracy during the iteration process. To minimize the non-zero number of sparse matrix and obtain a diagonal mass matrix, we apply the reduced order integral technique. A direct solver with its speed independent of the condition number is adopted for quickly solving the large-scale sparse linear equations system. To check the accuracy of our SETD algorithm, we compare our results with semi-analytical solutions for a three-layered earth model within the time lapse 10-6-10-2s for different physical meshes and SE orders. The results show that the relative errors for magnetic field B and magnetic induction are both around 3-5%. Further we calculate AEM responses for an AEM system over a 3D earth model in Figure 1. From numerical experiments for both 1D and 3D model, we draw the conclusions that: 1) SETD can deliver an accurate results for both dB/dt and B; 2) increasing SE order improves the modeling accuracy for early to middle time channels when the EM field diffuses fast so the high-order SE can model the detailed variation; 3) at very late time channels, increasing SE order has little improvement on modeling accuracy, but the time interval plays

  2. DCE-PWI 3D T1-measurement as function of time or flip angle

    DEFF Research Database (Denmark)

    Mikkelsen, Irene Klærke; Peters, David Alberg; Tietze, Anna

    Dynamic Contrast Enhanced Perfusion Weighted Imaging (DCE-PWI) and the preceding T1 measurement is usually performed with a FLASH sequence. For the sake of speed, the 3D T1 measurement is often performed by measuring the signal for a range of flip angles instead of as a function the inversion (or...... saturation) time [1,2]. This work investigates how off-set in flip angles in the presence of B1 inhomogeneities propagates into large errors in the T1 estimates. The errors are markedly reduced when the measurement is performed as a function of time, however this requires signal preparation....

  3. Unification of gauge and gravity Chern-Simons theories in 3-D space-time

    Energy Technology Data Exchange (ETDEWEB)

    Saghir, Chireen A.; Shamseddine, Laurence W. [American University of Beirut, Physics Department, Beirut (Lebanon)

    2017-11-15

    Chamseddine and Mukhanov showed that gravity and gauge theories could be unified in one geometric construction provided that a metricity condition is imposed on the vielbein. In this paper we are going to show that by enlarging the gauge group we are able to unify Chern-Simons gauge theory and Chern-Simons gravity in 3-D space-time. Such a unification leads to the quantization of the coefficients for both Chern-Simons terms for compact groups but not for non-compact groups. Moreover, it leads to a topological invariant quantity of the 3-dimensional space-time manifold on which they are defined. (orig.)

  4. Autonomous and 3D real-time multi-beam manipulation in a microfluidic environment

    DEFF Research Database (Denmark)

    Perch-Nielsen, I.; Rodrigo, P.J.; Alonzo, C.A.

    2006-01-01

    The Generalized Phase Contrast (GPC) method of optical 3D manipulation has previously been used for controlled spatial manipulation of live biological specimen in real-time. These biological experiments were carried out over a time-span of several hours while an operator intermittently optimized...... the optical system. Here we present GPC-based optical micromanipulation in a microfluidic system where trapping experiments are computer-automated and thereby capable of running with only limited supervision. The system is able to dynamically detect living yeast cells using a computer-interfaced CCD camera...

  5. Real time 3D structural and Doppler OCT imaging on graphics processing units

    Science.gov (United States)

    Sylwestrzak, Marcin; Szlag, Daniel; Szkulmowski, Maciej; Gorczyńska, Iwona; Bukowska, Danuta; Wojtkowski, Maciej; Targowski, Piotr

    2013-03-01

    In this report the application of graphics processing unit (GPU) programming for real-time 3D Fourier domain Optical Coherence Tomography (FdOCT) imaging with implementation of Doppler algorithms for visualization of the flows in capillary vessels is presented. Generally, the time of the data processing of the FdOCT data on the main processor of the computer (CPU) constitute a main limitation for real-time imaging. Employing additional algorithms, such as Doppler OCT analysis, makes this processing even more time consuming. Lately developed GPUs, which offers a very high computational power, give a solution to this problem. Taking advantages of them for massively parallel data processing, allow for real-time imaging in FdOCT. The presented software for structural and Doppler OCT allow for the whole processing with visualization of 2D data consisting of 2000 A-scans generated from 2048 pixels spectra with frame rate about 120 fps. The 3D imaging in the same mode of the volume data build of 220 × 100 A-scans is performed at a rate of about 8 frames per second. In this paper a software architecture, organization of the threads and optimization applied is shown. For illustration the screen shots recorded during real time imaging of the phantom (homogeneous water solution of Intralipid in glass capillary) and the human eye in-vivo is presented.

  6. A novel time dependent gamma evaluation function for dynamic 2D and 3D dose distributions

    International Nuclear Information System (INIS)

    Podesta, Mark; Persoon, Lucas CGG; Verhaegen, Frank

    2014-01-01

    Modern external beam radiotherapy requires detailed verification and quality assurance so that confidence can be placed on both the delivery of a single treatment fraction and on the consistency of delivery throughout the treatment course. To verify dose distributions, a comparison between prediction and measurement must be made. Comparisons between two dose distributions are commonly performed using a Gamma evaluation which is a calculation of two quantities on a pixel by pixel basis; the dose difference, and the distance to agreement. By providing acceptance criteria (e.g. 3%, 3 mm), the function will find the most appropriate match within its two degrees of freedom. For complex dynamic treatments such as IMRT or VMAT it is important to verify the dose delivery in a time dependent manner and so a gamma evaluation that includes a degree of freedom in the time domain via a third parameter, time to agreement, is presented here. A C++ (mex) based gamma function was created that could be run on either CPU and GPU computing platforms that would allow a degree of freedom in the time domain. Simple test cases were created in both 2D and 3D comprising of simple geometrical shapes with well-defined boundaries varying over time. Changes of varying magnitude in either space or time were introduced and repeated gamma analyses were performed varying the criteria. A clinical VMAT case was also included, artificial air bubbles of varying size were introduced to a patient geometry, along with shifts of varying magnitude in treatment time. For all test cases where errors in distance, dose or time were introduced, the time dependent gamma evaluation could accurately highlight the errors. The time dependent gamma function presented here allows time to be included as a degree of freedom in gamma evaluations. The function allows for 2D and 3D data sets which are varying over time to be compared using appropriate criteria without penalising minor offsets of subsequent radiation

  7. A Study of Avionics Time Division Multiplex Bus Simulation.

    Science.gov (United States)

    1980-12-01

    STUDY OF AVIONICS TIME DIVISION MULTIPLEX BUS SIMULATION, For Period Covering ’? *-" . (. I Janu wry k~t-4-31 Decoe 380 tP_: Final Report -, - / -AFOSR...simulation modeling is a type of art work, and therefore requires a talented engineer. Furthermore, the complexity of the sys- tem may be such that it is...used to synchronize the movement of the assembly set. Operand: X field specifies the block number of a MATCH block. Condition for entry acceptance: It

  8. Near-real time 3D probabilistic earthquakes locations at Mt. Etna volcano

    Science.gov (United States)

    Barberi, G.; D'Agostino, M.; Mostaccio, A.; Patane', D.; Tuve', T.

    2012-04-01

    Automatic procedure for locating earthquake in quasi-real time must provide a good estimation of earthquakes location within a few seconds after the event is first detected and is strongly needed for seismic warning system. The reliability of an automatic location algorithm is influenced by several factors such as errors in picking seismic phases, network geometry, and velocity model uncertainties. On Mt. Etna, the seismic network is managed by INGV and the quasi-real time earthquakes locations are performed by using an automatic-picking algorithm based on short-term-average to long-term-average ratios (STA/LTA) calculated from an approximate squared envelope function of the seismogram, which furnish a list of P-wave arrival times, and the location algorithm Hypoellipse, with a 1D velocity model. The main purpose of this work is to investigate the performances of a different automatic procedure to improve the quasi-real time earthquakes locations. In fact, as the automatic data processing may be affected by outliers (wrong picks), the use of a traditional earthquake location techniques based on a least-square misfit function (L2-norm) often yield unstable and unreliable solutions. Moreover, on Mt. Etna, the 1D model is often unable to represent the complex structure of the volcano (in particular the strong lateral heterogeneities), whereas the increasing accuracy in the 3D velocity models at Mt. Etna during recent years allows their use today in routine earthquake locations. Therefore, we selected, as reference locations, all the events occurred on Mt. Etna in the last year (2011) which was automatically detected and located by means of the Hypoellipse code. By using this dataset (more than 300 events), we applied a nonlinear probabilistic earthquake location algorithm using the Equal Differential Time (EDT) likelihood function, (Font et al., 2004; Lomax, 2005) which is much more robust in the presence of outliers in the data. Successively, by using a probabilistic

  9. 3D time-domain airborne EM forward modeling with topography

    Science.gov (United States)

    Yin, Changchun; Qi, Yanfu; Liu, Yunhe; Cai, Jing

    2016-11-01

    The time-domain finite-difference method has been widely used in simulation of the electromagnetic field diffusion. However, this method is severely restricted by the mesh size and time step. To overcome the defect, we adopted edge finite-element method for unstructured grid with Backward Euler method to conduct 3D airborne electromagnetic forward modeling directly in time-domain. The tetrahedral meshes provide the flexibility required for representing the rugged topography and complex-shape anomalous bodies. We simulated the practical shape, size and attitude of transmitting source by directly setting the loop into the well-generated grids. The characteristic properties of vector basic functions guarantee automatic satisfaction of divergence-free property of electric fields. The Galerkin's method is used to discretize the governing equations and a direct solver is adopted to solve the large sparse linear system. We adopted an algorithm with constant step in each time segment to speed up the forward modeling. Further we introduced the local mesh strategy to reduce the calculations, in which an optimized grid is designed for each sounding station. We check the accuracy of our 3D modeling results against the solution for a homogenous half-space and those for a buried vertical plate model using integral equation. The numerical experiments for a hill, a valley or undulating topography model with buried anomalous bodies were further studied that show that the topography has a serious effect on airborne EM data.

  10. Turnover Time in the Hyporheic Zone as Assessed by 3D Geophysical Imaging

    Science.gov (United States)

    Kohler, B.; Hall, R. O., Jr.; Carr, B.

    2017-12-01

    The hyporheic zone (HZ) is a region of interest in stream hydrology and ecology, however, its heterogeneity across small spatial scales and difficulty to directly measure has hampered researchers' efforts to understand its specific contribution to processes such as solute transport and nutrient retention and removal. In recent years researchers have combined geophysical imaging, such as electrical resistivity tomography (ERT), with tracer additions to directly measure exchange between surface waters and the HZ without physically disrupting natural subsurface flow paths. We conducted constant-rate tracer additions in two small headwater mountain streams while collecting 3D ERT images downstream before, during, after each tracer addition to yield spatially comprehensive models of solute exchange with the HZ through time. From our 3D HZ models, we calculated the active volume of the HZ, normalized to the maximum measured size, for each time step giving a breakthrough curve of tracer abundance in the HZ through time. We then described the tracer's turnover time in the HZ by applying exponential and power decay models to the breakthrough curve of HZ volume in a similar manner that one would for a tracer breakthrough curve in surface waters. Our models suggest that the flushing of solutes from the HZ exhibit multi-domain behavior, where advective and diffusive exchange between HZ and surface waters occur simultaneously and operate at distinctly different rates.

  11. Contrast-enhanced time-resolved 3-D MRA: applications in neurosurgery and interventional neuroradiology

    Energy Technology Data Exchange (ETDEWEB)

    Reinacher, Peter C.; Stracke, Paul; Reinges, Marcus H.T.; Hans, Franz J.; Krings, Timo [University Hospital of the Technical University, Department of Neurosurgery, Aachen (Germany)

    2007-07-15

    indicated hypervascularization. High temporal and spatial resolution 3-D MRA may allow correct identification and classification of fistulas and angiomas and help to reduce the number of pre-or postinterventional invasive diagnostic angiograms. This sequence is also helpful for characterizing the degree of vascularization in preoperative evaluation of meningiomas and to select meningiomas suitable for embolization. Displacement of normal arteries and depiction of the venous anatomy can be achieved cost-effectively in a short period of time. The high spatial resolution also permits improved demonstration of the major feeding arteries, which helps to reduce the number of conventional angiograms required for meningioma evaluation. (orig.)

  12. Contrast-enhanced time-resolved 3-D MRA: applications in neurosurgery and interventional neuroradiology.

    Science.gov (United States)

    Reinacher, Peter C; Stracke, Paul; Reinges, Marcus H T; Hans, Franz J; Krings, Timo

    2007-07-01

    hypervascularization. High temporal and spatial resolution 3-D MRA may allow correct identification and classification of fistulas and angiomas and help to reduce the number of pre-or postinterventional invasive diagnostic angiograms. This sequence is also helpful for characterizing the degree of vascularization in preoperative evaluation of meningiomas and to select meningiomas suitable for embolization. Displacement of normal arteries and depiction of the venous anatomy can be achieved cost-effectively in a short period of time. The high spatial resolution also permits improved demonstration of the major feeding arteries, which helps to reduce the number of conventional angiograms required for meningioma evaluation.

  13. Hyperbolic tangent solution to the conformable time fractional Zakharov-Kuznetsov equation in 3D space

    Science.gov (United States)

    Korkmaz, Alper; Hepson, Ozlem Ersoy

    2018-01-01

    In the study, hyperbolic tangent (tanh) ansatz solution is investigated for the conformable time fractional Zakharov-Kuznetsov Equation (fZKE) in 3D space. Transformation of the fZKE to an ODE by the compatible wave transformation is the first step of the methodology. It is assumed that there exists a solution of positive integer power of hyperbolic tangent form. Determining the power of the predicted solution follows some algebra to find the relations among the other parameters given in the solution. The final step is transforming the solution into original variables.

  14. Arena3D: visualizing time-driven phenotypic differences in biological systems

    Directory of Open Access Journals (Sweden)

    Secrier Maria

    2012-03-01

    Full Text Available Abstract Background Elucidating the genotype-phenotype connection is one of the big challenges of modern molecular biology. To fully understand this connection, it is necessary to consider the underlying networks and the time factor. In this context of data deluge and heterogeneous information, visualization plays an essential role in interpreting complex and dynamic topologies. Thus, software that is able to bring the network, phenotypic and temporal information together is needed. Arena3D has been previously introduced as a tool that facilitates link discovery between processes. It uses a layered display to separate different levels of information while emphasizing the connections between them. We present novel developments of the tool for the visualization and analysis of dynamic genotype-phenotype landscapes. Results Version 2.0 introduces novel features that allow handling time course data in a phenotypic context. Gene expression levels or other measures can be loaded and visualized at different time points and phenotypic comparison is facilitated through clustering and correlation display or highlighting of impacting changes through time. Similarity scoring allows the identification of global patterns in dynamic heterogeneous data. In this paper we demonstrate the utility of the tool on two distinct biological problems of different scales. First, we analyze a medium scale dataset that looks at perturbation effects of the pluripotency regulator Nanog in murine embryonic stem cells. Dynamic cluster analysis suggests alternative indirect links between Nanog and other proteins in the core stem cell network. Moreover, recurrent correlations from the epigenetic to the translational level are identified. Second, we investigate a large scale dataset consisting of genome-wide knockdown screens for human genes essential in the mitotic process. Here, a potential new role for the gene lsm14a in cytokinesis is suggested. We also show how phenotypic

  15. Real-time tracking with a 3D-Flow processor array

    International Nuclear Information System (INIS)

    Crosetto, D.

    1993-06-01

    The problem of real-time track-finding has been performed to date with CAM (Content Addressable Memories) or with fast coincidence logic, because the processing scheme was thought to have much slower performance. Advances in technology together with a new architectural approach make it feasible to also explore the computing technique for real-time track finding thus giving the advantages of implementing algorithms that can find more parameters such as calculate the sagitta, curvature, pt, etc., with respect to the CAM approach. The report describes real-time track finding using new computing approach technique based on the 3D-Flow array processor system. This system consists of a fixed interconnection architecture scheme, allowing flexible algorithm implementation on a scalable platform. The 3D-Flow parallel processing system for track finding is scalable in size and performance by either increasing the number of processors, or increasing the speed or else the number of pipelined stages. The present article describes the conceptual idea and the design stage of the project

  16. Real-time tracking with a 3D-flow processor array

    International Nuclear Information System (INIS)

    Crosetto, D.

    1993-01-01

    The problem of real-time track-finding has been performed to date with CAM (Content Addressable Memories) or with fast coincidence logic, because the processing scheme was though to have much slower performance. Advances in technology together with a new architectural approach make it feasible to also explore the computing technique for real-time track finding thus giving the advantages of implementing algorithms that can find more parameters such as calculate the sagitta, curvature, pt, etc. with respect to the CAM approach. This report describes real-time track finding using a new computing approach technique based on the 3D-flow array processor system. This system consists of a fixed interconnection architexture scheme, allowing flexible algorithm implementation on a scalable platform. The 3D-Flow parallel processing system for track finding is scalable in size and performance by either increasing the number of processors, or increasing the speed or else the number of pipelined stages. The present article describes the conceptual idea and the design stage of the project

  17. Design and Performance Evaluation on Ultra-Wideband Time-Of-Arrival 3D Tracking System

    Science.gov (United States)

    Ni, Jianjun; Arndt, Dickey; Ngo, Phong; Dusl, John

    2012-01-01

    A three-dimensional (3D) Ultra-Wideband (UWB) Time--of-Arrival (TOA) tracking system has been studied at NASA Johnson Space Center (JSC) to provide the tracking capability inside the International Space Station (ISS) modules for various applications. One of applications is to locate and report the location where crew experienced possible high level of carbon-dioxide and felt upset. In order to accurately locate those places in a multipath intensive environment like ISS modules, it requires a robust real-time location system (RTLS) which can provide the required accuracy and update rate. A 3D UWB TOA tracking system with two-way ranging has been proposed and studied. The designed system will be tested in the Wireless Habitat Testbed which simulates the ISS module environment. In this presentation, we discuss the 3D TOA tracking algorithm and the performance evaluation based on different tracking baseline configurations. The simulation results show that two configurations of the tracking baseline are feasible. With 100 picoseconds standard deviation (STD) of TOA estimates, the average tracking error 0.2392 feet (about 7 centimeters) can be achieved for configuration Twisted Rectangle while the average tracking error 0.9183 feet (about 28 centimeters) can be achieved for configuration Slightly-Twisted Top Rectangle . The tracking accuracy can be further improved with the improvement of the STD of TOA estimates. With 10 picoseconds STD of TOA estimates, the average tracking error 0.0239 feet (less than 1 centimeter) can be achieved for configuration "Twisted Rectangle".

  18. A Novel 2D-to-3D Video Conversion Method Using Time-Coherent Depth Maps

    Directory of Open Access Journals (Sweden)

    Shouyi Yin

    2015-06-01

    Full Text Available In this paper, we propose a novel 2D-to-3D video conversion method for 3D entertainment applications. 3D entertainment is getting more and more popular and can be found in many contexts, such as TV and home gaming equipment. 3D image sensors are a new method to produce stereoscopic video content conveniently and at a low cost, and can thus meet the urgent demand for 3D videos in the 3D entertaiment market. Generally, 2D image sensor and 2D-to-3D conversion chip can compose a 3D image sensor. Our study presents a novel 2D-to-3D video conversion algorithm which can be adopted in a 3D image sensor. In our algorithm, a depth map is generated by combining global depth gradient and local depth refinement for each frame of 2D video input. Global depth gradient is computed according to image type while local depth refinement is related to color information. As input 2D video content consists of a number of video shots, the proposed algorithm reuses the global depth gradient of frames within the same video shot to generate time-coherent depth maps. The experimental results prove that this novel method can adapt to different image types, reduce computational complexity and improve the temporal smoothness of generated 3D video.

  19. REM-3D Reference Datasets: Reconciling large and diverse compilations of travel-time observations

    Science.gov (United States)

    Moulik, P.; Lekic, V.; Romanowicz, B. A.

    2017-12-01

    A three-dimensional Reference Earth model (REM-3D) should ideally represent the consensus view of long-wavelength heterogeneity in the Earth's mantle through the joint modeling of large and diverse seismological datasets. This requires reconciliation of datasets obtained using various methodologies and identification of consistent features. The goal of REM-3D datasets is to provide a quality-controlled and comprehensive set of seismic observations that would not only enable construction of REM-3D, but also allow identification of outliers and assist in more detailed studies of heterogeneity. The community response to data solicitation has been enthusiastic with several groups across the world contributing recent measurements of normal modes, (fundamental mode and overtone) surface waves, and body waves. We present results from ongoing work with body and surface wave datasets analyzed in consultation with a Reference Dataset Working Group. We have formulated procedures for reconciling travel-time datasets that include: (1) quality control for salvaging missing metadata; (2) identification of and reasons for discrepant measurements; (3) homogenization of coverage through the construction of summary rays; and (4) inversions of structure at various wavelengths to evaluate inter-dataset consistency. In consultation with the Reference Dataset Working Group, we retrieved the station and earthquake metadata in several legacy compilations and codified several guidelines that would facilitate easy storage and reproducibility. We find strong agreement between the dispersion measurements of fundamental-mode Rayleigh waves, particularly when made using supervised techniques. The agreement deteriorates substantially in surface-wave overtones, for which discrepancies vary with frequency and overtone number. A half-cycle band of discrepancies is attributed to reversed instrument polarities at a limited number of stations, which are not reflected in the instrument response history

  20. Multiscale synchrony behaviors of paired financial time series by 3D multi-continuum percolation

    Science.gov (United States)

    Wang, M.; Wang, J.; Wang, B. T.

    2018-02-01

    Multiscale synchrony behaviors and nonlinear dynamics of paired financial time series are investigated, in an attempt to study the cross correlation relationships between two stock markets. A random stock price model is developed by a new system called three-dimensional (3D) multi-continuum percolation system, which is utilized to imitate the formation mechanism of price dynamics and explain the nonlinear behaviors found in financial time series. We assume that the price fluctuations are caused by the spread of investment information. The cluster of 3D multi-continuum percolation represents the cluster of investors who share the same investment attitude. In this paper, we focus on the paired return series, the paired volatility series, and the paired intrinsic mode functions which are decomposed by empirical mode decomposition. A new cross recurrence quantification analysis is put forward, combining with multiscale cross-sample entropy, to investigate the multiscale synchrony of these paired series from the proposed model. The corresponding research is also carried out for two China stock markets as comparison.

  1. An inexpensive underwater mine countermeasures simulator with real-time 3D after action review

    Directory of Open Access Journals (Sweden)

    Robert Stone

    2016-10-01

    Full Text Available This paper presents the results of a concept capability demonstration pilot study, the aim of which was to investigate how inexpensive gaming software and hardware technologies could be exploited in the development and evaluation of a simulator prototype for training Royal Navy mine clearance divers, specifically focusing on the detection and accurate reporting of the location and condition of underwater ordnance. The simulator was constructed using the Blender open source 3D modelling toolkit and game engine, and featured not only an interactive 3D editor for underwater scenario generation by instructors, but also a real-time, 3D After Action Review (AAR system for formative assessment and feedback. The simulated scenarios and AAR architecture were based on early human factors observations and briefings conducted at the UK's Defence Diving School (DDS, an organisation that provides basic military diving training for all Royal Navy and Army (Royal Engineers divers. An experimental pilot study was undertaken to determine whether or not basic navigational and mine detection components of diver performance could be improved as a result of exposing participants to the AAR system, delivered between simulated diving scenarios. The results suggest that the provision of AAR was accompanied by significant performance improvements in the positive identification of simulated underwater ordnance (in contrast to non-ordnance objects and on participants' description of their location, their immediate in-water or seabed context and their structural condition. Only marginal improvements were found with participants' navigational performance in terms of their deviation accuracies from a pre-programmed expert search path. Overall, this project contributes to the growing corpus of evidence supporting the development of simulators that demonstrate the value of exploiting open source gaming software and the significance of adopting established games design

  2. 3D time dependent thermo-fluid dynamic model of ground deformation at Campi Flegrei caldera

    Science.gov (United States)

    Castaldo, R.; Tizzani, P.; Manconi, A.; Manzo, M.; Pepe, S.; Pepe, A.; Lanari, R.

    2012-04-01

    In active volcanic areas deformation signals are generally characterized by non-linear spatial and temporal variations [Tizzani P. et al., 2007]. This behaviour has been revealed in the last two decades by the so-called advanced DInSAR processing algorithms, developed to analyze surface deformation phenomena [Berardino P. et al., 2002; Ferretti C. et al., 2001]. Notwithstanding, most of the inverse modelling attempts to characterize the evolution of the volcanic sources are based on the assumption that the Earth's crust behaves as a homogeneous linear elastic material. However, the behaviour of the upper lithosphere in thermally anomalous regions (as active volcanoes are) might be well described as a non-Newtonian fluid, where some of the material proprieties of the rocks (i.e., apparent viscosities) can change over time [Pinkerton H. et al., 1995]. In this context, we considered the thermal proprieties and mechanical heterogeneities of the upper crust in order to develop a new 3D time dependent thermo-fluid dynamic model of Campi Flegrei (CF) caldera, Southern Italy. More specifically, according to Tizzani P. et al. (2010), we integrated in a FEM environment geophysical information (gravimetric, seismic, and borehole data) available for the considered area and performed two FEM optimization procedures to constrain the 3D distribution of unknown physical parameters (temperature and viscosity distributions) that might help explaining the data observed at surface (geothermal wells and DInSAR measurements). First, we searched for the heat production, the volume source distribution and surface emissivity parameters providing the best-fit of the geothermal profiles data measured at six boreholes [Agip ESGE, 1986], by solving the Fourier heat equation over time (about 40 kys). The 3D thermal field resulting from this optimization was used to calculate the 3D brittle-ductile transition. This analysis revealed the presence of a ductile region, located beneath the centre of

  3. Probabilistic 3-D time-lapse inversion of magnetotelluric data: Application to an enhanced geothermal system

    Science.gov (United States)

    Rosas-Carbajal, Marina; Linde, Nicolas; Peacock, Jared R.; Zyserman, F. I.; Kalscheuer, Thomas; Thiel, Stephan

    2015-01-01

    Surface-based monitoring of mass transfer caused by injections and extractions in deep boreholes is crucial to maximize oil, gas and geothermal production. Inductive electromagnetic methods, such as magnetotellurics, are appealing for these applications due to their large penetration depths and sensitivity to changes in fluid conductivity and fracture connectivity. In this work, we propose a 3-D Markov chain Monte Carlo inversion of time-lapse magnetotelluric data to image mass transfer following a saline fluid injection. The inversion estimates the posterior probability density function of the resulting plume, and thereby quantifies model uncertainty. To decrease computation times, we base the parametrization on a reduced Legendre moment decomposition of the plume. A synthetic test shows that our methodology is effective when the electrical resistivity structure prior to the injection is well known. The centre of mass and spread of the plume are well retrieved.We then apply our inversion strategy to an injection experiment in an enhanced geothermal system at Paralana, South Australia, and compare it to a 3-D deterministic time-lapse inversion. The latter retrieves resistivity changes that are more shallow than the actual injection interval, whereas the probabilistic inversion retrieves plumes that are located at the correct depths and oriented in a preferential north-south direction. To explain the time-lapse data, the inversion requires unrealistically large resistivity changes with respect to the base model. We suggest that this is partly explained by unaccounted subsurface heterogeneities in the base model from which time-lapse changes are inferred.

  4. Real time 3D pattern recognition using laser scanning and a pipeline processor

    International Nuclear Information System (INIS)

    Svetkoff, D.J.; Peterson, L.M.; Dell'Eva, M.; Lougheed, R.M.

    1984-01-01

    Real time recognition of three dimensional surfaces in scenes where objects are partially occluded and in harsh environments is a challenging problem for advanced 3D vision systems. Active laser ranging sensors measure surface depth directly and therefore avoid the extensive computation required for reconstruction of an approximate depth map from multiple camera views. Active scanners have also proven to be effective for recognizing objects in low contrast scenes. The capability for real time object recognition is introduced through the use of a pipeline processor for rapid extraction of three dimensional features. This paper describes a prototype active laser scanner and pipeline processor developed at the Environmental Research Institute of Michigan which is currently being refined for use in advanced sensor based robot applications. Examples of three dimensional imagery and the results of applying surface measurement algorithms with the Cytocomputer will be shown

  5. 3D Indoor Positioning of UAVs with Spread Spectrum Ultrasound and Time-of-Flight Cameras.

    Science.gov (United States)

    Paredes, José A; Álvarez, Fernando J; Aguilera, Teodoro; Villadangos, José M

    2017-12-30

    This work proposes the use of a hybrid acoustic and optical indoor positioning system for the accurate 3D positioning of Unmanned Aerial Vehicles (UAVs). The acoustic module of this system is based on a Time-Code Division Multiple Access (T-CDMA) scheme, where the sequential emission of five spread spectrum ultrasonic codes is performed to compute the horizontal vehicle position following a 2D multilateration procedure. The optical module is based on a Time-Of-Flight (TOF) camera that provides an initial estimation for the vehicle height. A recursive algorithm programmed on an external computer is then proposed to refine the estimated position. Experimental results show that the proposed system can increase the accuracy of a solely acoustic system by 70-80% in terms of positioning mean square error.

  6. Space-Time-Frequency Characterization of 3D Nonisotropic MIMO Multicarrier Propagation Channels Employing Directional Antennas

    Directory of Open Access Journals (Sweden)

    Saeed Gazor

    2008-09-01

    Full Text Available Channel models for outdoor wireless systems usually assume two-dimensional (2D random scattering media. In the practical outdoor wireless channels, the impact of the wave propagation in the third-dimension is definitely important; especially when the communication system efficiently exploits potentials of multiple antennas. In this paper, we propose a new model for multiple-input multiple-output (MIMO multicarrier propagation channels in a three-dimensional (3D environment. Specifically, the proposed model describes the cross-correlation function (CCF between two subchannels of an outdoor MIMO channel employing directional antennas and in the presence of nonisotropic wave propagation in 3D space. The derived CCF consists of some correlation terms. Each correlation term is in the form of a linear series expansion of averaged Bessel functions of the first kind with different orders. In practice, each correlation term has a limited number of Bessel components. Our numerical evaluations show the impact of different parameters of the propagation environment as well as the employed antennas on the resulting CCF. Using the proposed CCF, we also establish simple formulas to approximate the coherence time, the coherence bandwidth and the spatial coherence of such channels. The numerical curve fitting results fit to the empirical results reported in the channel modeling literature.

  7. Space-Time-Frequency Characterization of 3D Nonisotropic MIMO Multicarrier Propagation Channels Employing Directional Antennas

    Directory of Open Access Journals (Sweden)

    Gazor Saeed

    2008-01-01

    Full Text Available Abstract Channel models for outdoor wireless systems usually assume two-dimensional (2D random scattering media. In the practical outdoor wireless channels, the impact of the wave propagation in the third-dimension is definitely important; especially when the communication system efficiently exploits potentials of multiple antennas. In this paper, we propose a new model for multiple-input multiple-output (MIMO multicarrier propagation channels in a three-dimensional (3D environment. Specifically, the proposed model describes the cross-correlation function (CCF between two subchannels of an outdoor MIMO channel employing directional antennas and in the presence of nonisotropic wave propagation in 3D space. The derived CCF consists of some correlation terms. Each correlation term is in the form of a linear series expansion of averaged Bessel functions of the first kind with different orders. In practice, each correlation term has a limited number of Bessel components. Our numerical evaluations show the impact of different parameters of the propagation environment as well as the employed antennas on the resulting CCF. Using the proposed CCF, we also establish simple formulas to approximate the coherence time, the coherence bandwidth and the spatial coherence of such channels. The numerical curve fitting results fit to the empirical results reported in the channel modeling literature.

  8. Spatiotemporal Segmentation and Modeling of the Mitral Valve in Real-Time 3D Echocardiographic Images.

    Science.gov (United States)

    Pouch, Alison M; Aly, Ahmed H; Lai, Eric K; Yushkevich, Natalie; Stoffers, Rutger H; Gorman, Joseph H; Cheung, Albert T; Gorman, Joseph H; Gorman, Robert C; Yushkevich, Paul A

    2017-09-01

    Transesophageal echocardiography is the primary imaging modality for preoperative assessment of mitral valves with ischemic mitral regurgitation (IMR). While there are well known echocardiographic insights into the 3D morphology of mitral valves with IMR, such as annular dilation and leaflet tethering, less is understood about how quantification of valve dynamics can inform surgical treatment of IMR or predict short-term recurrence of the disease. As a step towards filling this knowledge gap, we present a novel framework for 4D segmentation and geometric modeling of the mitral valve in real-time 3D echocardiography (rt-3DE). The framework integrates multi-atlas label fusion and template-based medial modeling to generate quantitatively descriptive models of valve dynamics. The novelty of this work is that temporal consistency in the rt-3DE segmentations is enforced during both the segmentation and modeling stages with the use of groupwise label fusion and Kalman filtering. The algorithm is evaluated on rt-3DE data series from 10 patients: five with normal mitral valve morphology and five with severe IMR. In these 10 data series that total 207 individual 3DE images, each 3DE segmentation is validated against manual tracing and temporal consistency between segmentations is demonstrated. The ultimate goal is to generate accurate and consistent representations of valve dynamics that can both visually and quantitatively provide insight into normal and pathological valve function.

  9. High-accuracy and real-time 3D positioning, tracking system for medical imaging applications based on 3D digital image correlation

    Science.gov (United States)

    Xue, Yuan; Cheng, Teng; Xu, Xiaohai; Gao, Zeren; Li, Qianqian; Liu, Xiaojing; Wang, Xing; Song, Rui; Ju, Xiangyang; Zhang, Qingchuan

    2017-01-01

    This paper presents a system for positioning markers and tracking the pose of a rigid object with 6 degrees of freedom in real-time using 3D digital image correlation, with two examples for medical imaging applications. Traditional DIC method was improved to meet the requirements of the real-time by simplifying the computations of integral pixel search. Experiments were carried out and the results indicated that the new method improved the computational efficiency by about 4-10 times in comparison with the traditional DIC method. The system was aimed for orthognathic surgery navigation in order to track the maxilla segment after LeFort I osteotomy. Experiments showed noise for the static point was at the level of 10-3 mm and the measurement accuracy was 0.009 mm. The system was demonstrated on skin surface shape evaluation of a hand for finger stretching exercises, which indicated a great potential on tracking muscle and skin movements.

  10. Large-memory real-time multichannel multiplexed pattern recognition

    Science.gov (United States)

    Gregory, D. A.; Liu, H. K.

    1984-01-01

    The principle and experimental design of a real-time multichannel multiplexed optical pattern recognition system via use of a 25-focus dichromated gelatin holographic lens (hololens) are described. Each of the 25 foci of the hololens may have a storage and matched filtering capability approaching that of a single-lens correlator. If the space-bandwidth product of an input image is limited, as is true in most practical cases, the 25-focus hololens system has 25 times the capability of a single lens. Experimental results have shown that the interfilter noise is not serious. The system has already demonstrated the storage and recognition of over 70 matched filters - which is a larger capacity than any optical pattern recognition system reported to date.

  11. Parareal in time 3D numerical solver for the LWR Benchmark neutron diffusion transient model

    Energy Technology Data Exchange (ETDEWEB)

    Baudron, Anne-Marie, E-mail: anne-marie.baudron@cea.fr [Laboratoire de Recherche Conventionné MANON, CEA/DEN/DANS/DM2S and UPMC-CNRS/LJLL (France); CEA-DRN/DMT/SERMA, CEN-Saclay, 91191 Gif sur Yvette Cedex (France); Lautard, Jean-Jacques, E-mail: jean-jacques.lautard@cea.fr [Laboratoire de Recherche Conventionné MANON, CEA/DEN/DANS/DM2S and UPMC-CNRS/LJLL (France); CEA-DRN/DMT/SERMA, CEN-Saclay, 91191 Gif sur Yvette Cedex (France); Maday, Yvon, E-mail: maday@ann.jussieu.fr [Sorbonne Universités, UPMC Univ Paris 06, UMR 7598, Laboratoire Jacques-Louis Lions and Institut Universitaire de France, F-75005, Paris (France); Laboratoire de Recherche Conventionné MANON, CEA/DEN/DANS/DM2S and UPMC-CNRS/LJLL (France); Brown Univ, Division of Applied Maths, Providence, RI (United States); Riahi, Mohamed Kamel, E-mail: riahi@cmap.polytechnique.fr [Laboratoire de Recherche Conventionné MANON, CEA/DEN/DANS/DM2S and UPMC-CNRS/LJLL (France); CMAP, Inria-Saclay and X-Ecole Polytechnique, Route de Saclay, 91128 Palaiseau Cedex (France); Salomon, Julien, E-mail: salomon@ceremade.dauphine.fr [CEREMADE, Univ Paris-Dauphine, Pl. du Mal. de Lattre de Tassigny, F-75016, Paris (France)

    2014-12-15

    In this paper we present a time-parallel algorithm for the 3D neutrons calculation of a transient model in a nuclear reactor core. The neutrons calculation consists in numerically solving the time dependent diffusion approximation equation, which is a simplified transport equation. The numerical resolution is done with finite elements method based on a tetrahedral meshing of the computational domain, representing the reactor core, and time discretization is achieved using a θ-scheme. The transient model presents moving control rods during the time of the reaction. Therefore, cross-sections (piecewise constants) are taken into account by interpolations with respect to the velocity of the control rods. The parallelism across the time is achieved by an adequate use of the parareal in time algorithm to the handled problem. This parallel method is a predictor corrector scheme that iteratively combines the use of two kinds of numerical propagators, one coarse and one fine. Our method is made efficient by means of a coarse solver defined with large time step and fixed position control rods model, while the fine propagator is assumed to be a high order numerical approximation of the full model. The parallel implementation of our method provides a good scalability of the algorithm. Numerical results show the efficiency of the parareal method on large light water reactor transient model corresponding to the Langenbuch–Maurer–Werner benchmark.

  12. Assessment of image quality in real time three-dimensional dobutamine stress echocardiography: an integrated 2D/3D approach.

    Science.gov (United States)

    Johri, Amer M; Chitty, David W; Hua, Lanqi; Marincheva, Gergana; Picard, Michael H

    2015-03-01

    Three-dimensional (3D) stress echocardiography is a relatively new technique offering the potential to acquire images of the entire left ventricle from 1 or 2 transducer positions in a time-efficient manner. Relative to two-dimensional (2D) imaging, the ability to quickly acquire full volume images during peak stress with 3D echocardiography can eliminate left ventricular (LV) foreshortening while reducing inter-operator variability. Our objectives were to (1) determine the practicality of a novel integrated 2D/3D stress protocol in incorporating 3D imaging into a standard 2D stress echocardiogram and (2) to determine whether the quality of imaging using the novel 2D/3D protocol was sufficient for interpretation. Twenty-five patients referred for stress echocardiography underwent an integrated 2D/3D image acquisition protocol. LV segments were scored from 0 (absent or no clear endocardial visualization) to 3 (excellent/full visualization of endocardial border) with each modality. 2D segment quality scoring was compared with 3D. An integrated score was compared with either 2D or 3D imaging alone. Two-dimensional and 3D imaging were optimal for differing segments and the integrated protocol was superior to either modality alone. 3D imaging was superior in visualizing the anterior and anterolateral region of the base segments, compared to 2D imaging. 3D imaging was less useful for the base, the mid-inferior, and the inferoseptal segments, thus emphasizing the need to retain 2D imaging in stress echocardiography at this time. The integrated 2D/3D protocol approach to stress echocardiography is technically feasible and maximizes image quality of dobutamine stress echocardiography, improving patient assessment. © 2014, Wiley Periodicals, Inc.

  13. Real-time 3D vectorcardiography: an application for didactic use

    International Nuclear Information System (INIS)

    Daniel, G; Lissa, G; Redondo, D Medina; Vasquez, L; Zapata, D

    2007-01-01

    The traditional approach to teach the physiological basis of electrocardiography, based only on textbooks, turns out to be insufficient or confusing for students of biomedical sciences. The addition of laboratory practice to the curriculum enables students to approach theoretical aspects from a hands-on experience, resulting in a more efficient and deeper knowledge of the phenomena of interest. Here, we present the development of a PC-based application meant to facilitate the understanding of cardiac bioelectrical phenomena by visualizing in real time the instantaneous 3D cardiac vector. The system uses 8 standard leads from a 12-channel electrocardiograph. The application interface has pedagogic objectives, and facilitates the observation of cardiac depolarization and repolarization and its temporal relationship with the ECG, making it simpler to interpret

  14. Real-time 3D vectorcardiography: an application for didactic use

    Energy Technology Data Exchange (ETDEWEB)

    Daniel, G; Lissa, G; Redondo, D Medina; Vasquez, L; Zapata, D [Facultad de Ingenieria, Universidad Nacional de Entre Rios, Ruta 11 Km 10, Oro Verde, 3100 Entre Rios (Argentina)

    2007-11-15

    The traditional approach to teach the physiological basis of electrocardiography, based only on textbooks, turns out to be insufficient or confusing for students of biomedical sciences. The addition of laboratory practice to the curriculum enables students to approach theoretical aspects from a hands-on experience, resulting in a more efficient and deeper knowledge of the phenomena of interest. Here, we present the development of a PC-based application meant to facilitate the understanding of cardiac bioelectrical phenomena by visualizing in real time the instantaneous 3D cardiac vector. The system uses 8 standard leads from a 12-channel electrocardiograph. The application interface has pedagogic objectives, and facilitates the observation of cardiac depolarization and repolarization and its temporal relationship with the ECG, making it simpler to interpret.

  15. IPS – A SYSTEM FOR REAL-TIME NAVIGATION AND 3D MODELING

    Directory of Open Access Journals (Sweden)

    D. Grießbach

    2012-07-01

    Full Text Available fdaReliable navigation and 3D modeling is a necessary requirement for any autonomous system in real world scenarios. German Aerospace Center (DLR developed a system providing precise information about local position and orientation of a mobile platform as well as three-dimensional information about its environment in real-time. This system, called Integral Positioning System (IPS can be applied for indoor environments and outdoor environments. To achieve high precision, reliability, integrity and availability a multi-sensor approach was chosen. The important role of sensor data synchronization, system calibration and spatial referencing is emphasized because the data from several sensors has to be fused using a Kalman filter. A hardware operating system (HW-OS is presented, that facilitates the low-level integration of different interfaces. The benefit of this approach is an increased precision of synchronization at the expense of additional engineering costs. It will be shown that the additional effort is leveraged by the new design concept since the HW-OS methodology allows a proven, flexible and fast design process, a high re-usability of common components and consequently a higher reliability within the low-level sensor fusion. Another main focus of the paper is on IPS software. The DLR developed, implemented and tested a flexible and extensible software concept for data grabbing, efficient data handling, data preprocessing (e.g. image rectification being essential for thematic data processing. Standard outputs of IPS are a trajectory of the moving platform and a high density 3D point cloud of the current environment. This information is provided in real-time. Based on these results, information processing on more abstract levels can be executed.

  16. Modified 3D time-of-flight camera for object separation in organic farming

    Science.gov (United States)

    Knoll, Florian J.; Holtorf, Tim; Hussmann, Stephan

    2017-06-01

    An important step for the classification of plants in organic farming is the separation of the objects. In our approach a 3D camera will be used for this task. One problem is that most of the available 3D sensors are not suitable due to their bad resolution, low-speed and high costs. The Kinect II is an affordable alternative but designed for another workspace. In this paper it is shown why a 3D sensor is required for the separation of objects in organic farming and how the modification of a Kinect II 3D camera increases the range resolution to solve the given problem.

  17. Experimental Demonstration of 6-Mode Division Multiplexed NG-PON2: Cost Effective 40 Gbit/s/Spatial-Mode Access Based on 3D Laser Inscribed Photonic Lanterns

    DEFF Research Database (Denmark)

    Asif, Rameez; Hu, Hao; Mitchell, Paul

    We report the first space-division-multiplexed based symmetric NG-PON2 network by effi- ciently transmitting 40 Gbit/s/spatial-mode. Error free transmission (BER of 10−9 ) is obtained for all the downstream and upstream data tributaries over 1-km 6-spatial-mode FMF without using MIMO DSP......We report the first space-division-multiplexed based symmetric NG-PON2 network by effi- ciently transmitting 40 Gbit/s/spatial-mode. Error free transmission (BER of 10−9 ) is obtained for all the downstream and upstream data tributaries over 1-km 6-spatial-mode FMF without using MIMO DSP...

  18. A new time discrimination circuit for the 3D imaging Lidar

    Science.gov (United States)

    Hu, Chunsheng; Huang, Zongsheng; Qin, Shiqiao; Wang, Xingshu

    2012-10-01

    In order to enhance the time discrimination precision in the 3D imaging lidar, we propose a new time discrimination circuit, which improves both the delayer and the attenuator in the previous CFD (Constant Fraction Discriminator) circuit. The proposed circuit mainly includes a delayer, a low-pass filter, and a comparator. The delayer is implemented with a series of inductors and capacitors, which has some advantages: low signal distortion, small volume, easy adjustment, etc. The low-pass filter attenuates the signal amplitude and broadens the signal width, as well as reduces the noise by decreasing the equivalent noise bandwidth, and increases the signal slope at the discrimination time. Therefore, the time discrimination error is reduced significantly. This paper introduces the proposed circuit in detail, carries out a theoretical analysis for the noise and time discrimination error in the proposed circuit and compares them with the previous CFD circuit. The comparison results show that the proposed circuit can reduce the time discrimination error by about 50% under the same noise level. In addition, some experiments have been carried out to test the performances of the circuit. The experiments show that the time delay of the circuit is about 14ns, the time discrimination error is less than 150 ps when the voltage SNR ranges from 18.2 to 81.8, and the time discrimination error is less than 100 ps when the signal amplitude ranges from 0.2 V to 1.86 V. The tested time discrimination error is well in accordance with the theoretical calculation.

  19. Plasmonic Resonances for Spectroscopy Applications using 3D Finite-Difference Time-Domain Models

    Science.gov (United States)

    Ravi, Aruna

    Tuning plasmonic extinction resonances of sub-wavelength scale structures is essential to achieve maximum sensitivity and accuracy. These resonances can be controlled with careful design of nanoparticle geometries and incident wave attributes. In the first part of this dissertation, plasmonically enhanced effects on hexagonal-arrays of metal nanoparticles, metal-hole arrays (micro-mesh), and linear-arrays of metal nanorings are analyzed using three-dimensional Finite-Difference Time-Domain (3D-FDTD) simulations. The effect of particle size, lattice spacing, and lack of monodispersity of a self-assembled, hexagonal array layer of silver (Ag) nanoparticles on the extinction resonance is investigated to help determine optimal design specifications for efficient organic solar power harvesting. The enhancement of transmission resonances using plasmonic thin metal films with arrays of holes which enable recording of scatter-free infrared (IR) transmission spectra of individual particles is also explored. This method is quantitative, non-destructive and helps in better understanding the interaction of light with sub-wavelength particles. Next, plasmonically enhanced effects on linear arrays of gold (Au) rings are studied. Simulations employing 3D-FDTD can be used to determine the set of geometrical parameters to attain localized surface plasmon resonance (LSPR). The shifts in resonances due to changes in the effective dielectric of the structure are investigated, which is useful in sensing applications. Computational models enrich experimental studies. In the second part of this dissertation, the effect of particle size, shape and orientation on the IR spectra is investigated using 3D-FDTD and Mie-Bruggeman models. This computational analysis is extended to include clusters of particles of mixed composition. The prediction of extinction and absorption spectra of single particles of mixed composition helps in interpreting their physical properties and predict chemical

  20. An inkjet-printed buoyant 3-D lagrangian sensor for real-time flood monitoring

    KAUST Repository

    Farooqui, Muhammad Fahad

    2014-06-01

    A 3-D (cube-shaped) Lagrangian sensor, inkjet printed on a paper substrate, is presented for the first time. The sensor comprises a transmitter chip with a microcontroller completely embedded in the cube, along with a $1.5 \\\\lambda 0 dipole that is uniquely implemented on all the faces of the cube to achieve a near isotropic radiation pattern. The sensor has been designed to operate both in the air as well as water (half immersed) for real-time flood monitoring. The sensor weighs 1.8 gm and measures 13 mm$\\\\,\\\\times\\\\,$ 13 mm$\\\\,\\\\times\\\\,$ 13 mm, and each side of the cube corresponds to only $0.1 \\\\lambda 0 (at 2.4 GHz). The printed circuit board is also inkjet-printed on paper substrate to make the sensor light weight and buoyant. Issues related to the bending of inkjet-printed tracks and integration of the transmitter chip in the cube are discussed. The Lagrangian sensor is designed to operate in a wireless sensor network and field tests have confirmed that it can communicate up to a distance of 100 m while in the air and up to 50 m while half immersed in water. © 1963-2012 IEEE.

  1. In-home hierarchical posture classification with a time-of-flight 3D sensor.

    Science.gov (United States)

    Diraco, Giovanni; Leone, Alessandro; Siciliano, Pietro

    2014-01-01

    A non-invasive technique for posture classification suitable to be used in several in-home scenarios is proposed and preliminary validation results are presented. 3D point cloud sequences were acquired using a single time-of-flight sensor working in a privacy preserving modality and they were processed with a low power embedded PC. In order to satisfy different application requirements (e.g. covered distance range, processing speed and discrimination capabilities), a twofold discrimination approach was investigated in which features were hierarchically arranged from coarse to fine by exploiting both topological and volumetric representations. The topological representation encoded the intrinsic topology of the body's shape using a skeleton-based structure, thus guaranteeing invariance to scale, rotations and postural changes and achieving a high level of detail with a moderate computational cost. On the other hand, using the volumetric representation features were described in terms of 3D cylindrical histograms working within a wider range of distances in a faster way and also guaranteeing good invariance properties. The discrimination capabilities were evaluated in four different real-home scenarios related with the fields of ambient assisted living and homecare, namely "dangerous event detection", "anomalous behaviour detection", "activities recognition" and "natural human-ambient interaction". For each mentioned scenario, the discrimination capabilities were evaluated in terms of invariance to viewpoint changes, representation capabilities and classification performance, achieving promising results. The two feature representation approaches exhibited complementary characteristics showing high reliability with classification rates greater than 97%. Copyright © 2013 Elsevier B.V. All rights reserved.

  2. 3D viscous time dependent analysis of a slow moving landslide by finite elements

    Science.gov (United States)

    Bru, Guadalupe; Fernández-Merodo, Josè Antonio; García-Davalillo, Juan Carlos; Herrera, Gerardo

    2017-04-01

    A methodology to study the cinematic behavior in time and 3D effects of slow moving landslides is presented by its application to the Portalet landslide, located in the Spanish Central Pyrenees. The area is characterize by the presence of several complex landslides triggered by glacial retreat and developed in weathered Devonian and Carboniferous slate materials. In summer 2004, the toe of two paleolanslides was excavated in order to construct a parking area, which reactivated the preexistent rupture surfaces and generated a new and smaller roto-translational landslide of about 5·105m3. Works were paralyzed and the road A-136 connecting Spain and France was temporary closed. In 2006 stabilizing solutions were performed, although surface and deep monitoring data reveal that the landslide is currently active. In this work the cinematic behavior of the Portalet parking landslide has been reproduced since the excavation in 2004 until 2016 by an advanced 3D finite element model (FEM) analysis. A detailed 3D litho-stratigraphic geometry has been defined using the information available from previous works(1-3): real topography, geological profiles, ground water level and material properties. The first step has been a stability analysis using the shear stress reduction (SSR) technique to calibrate the value of the friction angle of the soil layer where the rupture surface develops. In this step the sensibility of the mesh size has been studied, as is a critical parameter. Secondly, stability analysis results have been verified by simulating the parking excavation with a static analysis using Mohr-Coulomb elastoplastic failure criteria. In the last step the behavior of the landslide has been recreated using a hydromechanic coupled formulation for displacements and interstitial water pressure (u-pw), a simple elevation ground water model calculated from daily rainfall and a Perzyna viscous constitutive model of the solid skeleton which represent the creep detected by

  3. Realistic 3D Terrain Roaming and Real-Time Flight Simulation

    Science.gov (United States)

    Que, Xiang; Liu, Gang; He, Zhenwen; Qi, Guang

    2014-12-01

    This paper presents an integrate method, which can provide access to current status and the dynamic visible scanning topography, to enhance the interactive during the terrain roaming and real-time flight simulation. A digital elevation model and digital ortho-photo map data integrated algorithm is proposed as the base algorithm for our approach to build a realistic 3D terrain scene. A new technique with help of render to texture and head of display for generating the navigation pane is used. In the flight simulating, in order to eliminate flying "jump", we employs the multidimensional linear interpolation method to adjust the camera parameters dynamically and steadily. Meanwhile, based on the principle of scanning laser imaging, we draw pseudo color figures by scanning topography in different directions according to the real-time flying status. Simulation results demonstrate that the proposed algorithm is prospective for applications and the method can improve the effect and enhance dynamic interaction during the real-time flight.

  4. Modeling of a 3D CMOS sensor for time-of-flight measurements

    Science.gov (United States)

    Kuhla, Rico; Hosticka, Bedrich J.; Mengel, Peter; Listl, Ludwig

    2004-02-01

    A solid state 3D-CMOS camera system for direct time-of-flight image acquisition consisting of a CMOS imaging sensor, a laser diode module for active laser pulse illumination and all optics for image forming is presented, including MDSI & CDS algorithms for time-of-flight evaluation from intensity imaging. The investigation is carried out using ideal and real signals. For real signals the narrow infrared laser pulse of the laser diode module and the shutter function of the sensors column circuit were sampled by a new sampling procedure. A discrete sampled shutter function was recorded by using the impulse response of a narrow pulse of FWHM=50ps and an additional delay block with step size of Δτ = 0.25ns. A deterministic system model based on LTI transfer functions was developed. The visual shutter windows give a good understanding of differences between ideal and real output functions of measurement system. Simulations of shutter and laser pulse brought out an extended linear delay domain from MDSI. A stochastic model for the transfer function and photon noise in time domain was developed. We used the model to investigate noise in variation the laser pulse shutter configuration.

  5. A Lyapunov-Based Approach for Time-Coordinated 3D Path-Following of Multiple Quadrotors

    Science.gov (United States)

    2012-12-01

    A Lyapunov-based approach for Time-Coordinated 3D Path-Following of Multiple Quadrotors Venanzio Cichella, Isaac Kaminer, Enric Xargay, Vladimir...the Time-Coordinated 3D Path-Following task for multiple quadrotor UAVs in the presence of time- varying communication networks and spatial and temporal...constraints. The objective is to enable a fleet of quadrotors to track predefined spatial paths while coordinating to achieve synchronization in both

  6. A Lyapunov-based Approach for Time-Coordinated 3D Path-Following of Multiple Quadrotors in SO(3)

    Science.gov (United States)

    2012-12-10

    REPORT A Lyapunov-based approach for Time-Coordinated 3D Path-Following of multiple Quadrotors in SO(3) 14. ABSTRACT 16. SECURITY CLASSIFICATION OF...Abstract—This paper focuses on the problem of developing control laws to solve the Time-Coordinated 3D Path-Following task for multiple Quadrotor UAVs...in the presence of time-varying communication networks and spatial and temporal constraints. The objective is to enable n Quadrotors to track prede?ned

  7. Unravelling earth flow dynamics with 3-D time series derived from UAV-SfM models

    Directory of Open Access Journals (Sweden)

    F. Clapuyt

    2017-12-01

    Full Text Available Accurately assessing geo-hazards and quantifying landslide risks in mountainous environments are gaining importance in the context of the ongoing global warming. For an in-depth understanding of slope failure mechanisms, accurate monitoring of the mass movement topography at high spatial and temporal resolutions remains essential. The choice of the acquisition framework for high-resolution topographic reconstructions will mainly result from the trade-off between the spatial resolution needed and the extent of the study area. Recent advances in the development of unmanned aerial vehicle (UAV-based image acquisition combined with the structure-from-motion (SfM algorithm for three-dimensional (3-D reconstruction make the UAV-SfM framework a competitive alternative to other high-resolution topographic techniques. In this study, we aim at gaining in-depth knowledge of the Schimbrig earthflow located in the foothills of the Central Swiss Alps by monitoring ground surface displacements at very high spatial and temporal resolution using the efficiency of the UAV-SfM framework. We produced distinct topographic datasets for three acquisition dates between 2013 and 2015 in order to conduct a comprehensive 3-D analysis of the landslide. Therefore, we computed (1 the sediment budget of the hillslope, and (2 the horizontal and (3 the three-dimensional surface displacements. The multitemporal UAV-SfM based topographic reconstructions allowed us to quantify rates of sediment redistribution and surface movements. Our data show that the Schimbrig earthflow is very active, with mean annual horizontal displacement ranging between 6 and 9 m. Combination and careful interpretation of high-resolution topographic analyses reveal the internal mechanisms of the earthflow and its complex rotational structure. In addition to variation in horizontal surface movements through time, we interestingly showed that the configuration of nested rotational units changes through

  8. Unravelling earth flow dynamics with 3-D time series derived from UAV-SfM models

    Science.gov (United States)

    Clapuyt, François; Vanacker, Veerle; Schlunegger, Fritz; Van Oost, Kristof

    2017-12-01

    Accurately assessing geo-hazards and quantifying landslide risks in mountainous environments are gaining importance in the context of the ongoing global warming. For an in-depth understanding of slope failure mechanisms, accurate monitoring of the mass movement topography at high spatial and temporal resolutions remains essential. The choice of the acquisition framework for high-resolution topographic reconstructions will mainly result from the trade-off between the spatial resolution needed and the extent of the study area. Recent advances in the development of unmanned aerial vehicle (UAV)-based image acquisition combined with the structure-from-motion (SfM) algorithm for three-dimensional (3-D) reconstruction make the UAV-SfM framework a competitive alternative to other high-resolution topographic techniques. In this study, we aim at gaining in-depth knowledge of the Schimbrig earthflow located in the foothills of the Central Swiss Alps by monitoring ground surface displacements at very high spatial and temporal resolution using the efficiency of the UAV-SfM framework. We produced distinct topographic datasets for three acquisition dates between 2013 and 2015 in order to conduct a comprehensive 3-D analysis of the landslide. Therefore, we computed (1) the sediment budget of the hillslope, and (2) the horizontal and (3) the three-dimensional surface displacements. The multitemporal UAV-SfM based topographic reconstructions allowed us to quantify rates of sediment redistribution and surface movements. Our data show that the Schimbrig earthflow is very active, with mean annual horizontal displacement ranging between 6 and 9 m. Combination and careful interpretation of high-resolution topographic analyses reveal the internal mechanisms of the earthflow and its complex rotational structure. In addition to variation in horizontal surface movements through time, we interestingly showed that the configuration of nested rotational units changes through time. Although

  9. Time-lapse 3D imaging of calcite precipitation in a microporous column

    Science.gov (United States)

    Godinho, Jose R. A.; Withers, Philip J.

    2018-02-01

    Time-lapse X-ray computed tomography is used to image the evolution of calcite precipitation during flow through microporous quartz over the course of 400 h. The growth rate decreases by more than seven times, which is linked to the clogging of flow paths that restricts flow to some regions of the column. Fewer precipitates are observed as a function of column depth, which is found to be related to a differential nucleation density along the sample. A higher nucleation density closer to the inlet implies more crystal volume increase per unit of time without affecting the rate if normalized to the surface area of crystals. Our overall growth rates measured in porous media are orders of magnitude slower than growth rates derived from traditional precipitation experiments on free surfaces. Based on our time-lapse results we hypothesize a scenario where the evolving distribution of precipitates within a pore structure during precipitation progressively modifies the local transport through the pores. Within less permeable regions the saturation index may be lower than along the main flow paths. Therefore, the reactive crystal surfaces within those regions grow at a slower rate than that expected from the bulk fluid composition. Since the amount of reactive surface area within these less permeable regions increases over time, the overall growth rate decreases without a necessary significant change of the bulk fluid composition along more permeable flow paths. In conclusion, the overall growth rates in an evolving porous media expected from bulk fluid compositions alone can be overestimated due to the development of stagnant sub-regions where the reactive surface area is bath by a solution with lower saturation index. In this context we highlight the value of time-lapse 3D studies for understanding the dynamics of mineral precipitation in porous media.

  10. GEO-REFERENCED MAPPING USING AN AIRBORNE 3D TIME-OF-FLIGHT CAMERA

    Directory of Open Access Journals (Sweden)

    T. K. Kohoutek

    2012-09-01

    Full Text Available This paper presents the first experience of a close range bird's eye view photogrammetry with range imaging (RIM sensors for the real time generation of high resolution geo-referenced 3D surface models. The aim of this study was to develop a mobile, versatile and less costly outdoor survey methodology to measure natural surfaces compared to the terrestrial laser scanning (TLS. Two commercial RIM cameras (SR4000 by MESA Imaging AG and a CamCube 2.0 by PMDTechnologies GmbH were mounted on a lightweight crane and on an unmanned aerial vehicle (UAV. The field experiments revealed various challenges in real time deployment of the two state-of-the-art RIM systems, e.g. processing of the large data volume. Acquisition strategy and data processing and first measurements are presented. The precision of the measured distances is less than 1 cm for good conditions. However, the measurement precision degraded under the test conditions due to direct sunlight, strong illumination contrasts and helicopter vibrations.

  11. 3D Multi‐source Least‐squares Reverse Time Migration

    KAUST Repository

    Dai, Wei

    2010-10-17

    We present the theory and numerical results for least‐squares reverse time migration (LSRTM) of phase‐encoded supergathers, where each supergather is the superposition of phased‐encoded shots. Three type of encoding functions are used in this study: random time shift, random source polarity and random source location selected from a pre‐designed table. Numerical tests for the 3D SEG/EAGE Overthrust model show that multi‐source LSRTM can suppress migration artifacts in the migration image and remove most of the crosstalk noise from multi‐source data. Empirical results suggest that multi‐source LSRTM can provide a noticeable increase in computational efficiency compared to standard RTM, when the CSGs in a supergather are modeled and migrated together with a finite‐difference simulator. If the phase‐encoding functions are dynamically changed after each iteration of LSRTM, the best images are obtained. The potential drawback is that the final results are very sensitive to the accuracy of the starting model.

  12. Lagrangian Finite Element Method for 3D Time-Dependent Viscoelastic Flow Computations using Integral Models

    DEFF Research Database (Denmark)

    Rasmussen, Henrik Koblitz

    2000-01-01

    The 3D-LIM has as yet been used to simulate the following two three-dimensional problems. First, the method has been used to simulete for viscoelastic end-plate instability that occurs under certain conditions in the transient filament stretching apparatus for pressure sensitive adhesives...... (polymeric melts) and polymeric solutions. Secondly, the 3D-LIM has also been applied to calculate the inflation of a thick sheet of a polymer melt into an elliptic cylinder. These problems all include free surfaces. As the governing equations are solved for the particle positions, the motion of surfaces can...... be followed easily even in 3D viscoelastic flow....

  13. Time-division-multiplex control scheme for voltage multiplier rectifiers

    Directory of Open Access Journals (Sweden)

    Bin-Han Liu

    2017-03-01

    Full Text Available A voltage multiplier rectifier with a novel time-division-multiplexing (TDM control scheme for high step-up converters is proposed in this study. In the proposed TDM control scheme, two full-wave voltage doubler rectifiers can be combined to realise a voltage quadrupler rectifier. The proposed voltage quadrupler rectifier can reduce transformer turn ratio and transformer size for high step-up converters and also reduce voltage stress for the output capacitors and rectifier diodes. An N-times voltage rectifier can be straightforwardly produced by extending the concepts from the proposed TDM control scheme. A phase-shift full-bridge (PSFB converter is adopted in the primary side of the proposed voltage quadrupler rectifier to construct a PSFB quadrupler converter. Experimental results for the PSFB quadrupler converter demonstrate the performance of the proposed TDM control scheme for voltage quadrupler rectifiers. An 8-times voltage rectifier is simulated to determine the validity of extending the proposed TDM control scheme to realise an N-times voltage rectifier. Experimental and simulation results show that the proposed TDM control scheme has great potential to be used in high step-up converters.

  14. Surface Explorations: 3D Moving Images as Cartographies of Time = Exploraciones de superficie: Imágenes 3D en movimiento como cartografiáis del tiempo

    Directory of Open Access Journals (Sweden)

    Nanna Verhoeff

    2016-05-01

    Full Text Available Moving images of travel and exploration have a long history. In this essay I will examine how the trope of navigation in 3D moving images can work towards an intimate and haptic encounter with other times and other places – elsewhen and elsewhere. The particular navigational construction of space in time afforded by 3D moving images can be considered a cartography of time. This is a haptic cartography of exploration of the surfaces on which this encounter takes place. Taking Werner Herzog’s film Cave of Forgotten Dreams (2010 as a theoretical object, the main question addressed is how the creative exploration of new technologies of visualization – here: from rock painting, principles of animation, to 3D moving images – entails an epistemological inquiry into, and statements about, the power of images, technologies of vision, and the media cartographies they make. These questions turn new technologies into relevant sources for cultural, historical and philosophical reflection.Las imágenes en movimiento del viaje y de la exploración tienen una larga tradición. En este artículo examinaré cómo el tropo de la navegación en las imágenes en tres dimensiones puede crear un encuentro íntimo y háptico con otros tiempos y otros lugares. La particular construcción relativa a la navegación del espacio en el tiempo en las imágenes en tres dimensiones puede ser considerada como una cartografía del tiempo. Esta es una cartografía háptica de la exploración de superficies en las cuales ese encuentro tiene lugar. Tomando el film de Werner Herzog Cueva de los sueños olvidados (2010 como un objeto teórico, la cuestión principal que se formula es cómo la exploración creativa de las nuevas tecnologías de la visualización – ya sea desde la pintura sobre rocas, y los principios de animación, hasta las imágenes en tres dimensiones – implica una investigación epistemológica, con las consecuentes afirmaciones, sobre el poder de

  15. Monitoring of In-Situ Remediation By Time Lapse 3D Geo-Electric Measurements

    Science.gov (United States)

    Kanli, A. I.; Tildy, P.; Neducza, B.; Nagy, P.; Hegymegi, C.

    2017-12-01

    Injection of chemical oxidant solution to degrade the subsurface contaminants can be used for hydrocarbon contamination remediation. In this study, we developed a non-destructive measurement strategy to monitor oxidative in-situ remediation processes. The difficulties of the presented study originate from the small volume of conductive solution that can be used due to environmental considerations. Due to the effect of conductive groundwater and the high clay content of the targeted layer and the small volume of conductive solution that can be used due to environmental considerations, a site specific synthetic modelling is necessary for measurement design involving the results of preliminary 2D ERT measurements, electrical conductivity measurements of different active agents and expected resistivity changes calculated by soil resistivity modelling. Because of chemical biodegradation, the results of soil resistivity modelling have suggested that the reagent have complex effects on contaminated soils. As a result the plume of resistivity changes caused by the injected agent was determined showing strong fracturing effect because of the high pressure of injection. 3D time-lapse geo-electric measurements were proven to provide a usable monitoring tool for in-situ remediation as a result of our sophisticated tests and synthetic modelling.

  16. Introduction to programmable shader in real time 3D computer graphics

    International Nuclear Information System (INIS)

    Uemura, Syuhei; Kirii, Keisuke; Matsumura, Makoto; Matsumoto, Kenichiro

    2004-01-01

    Nevertheless the visualization of large-scale data had played the important role which influences informational usefulness in the basic field of science, the high-end graphics system or the exclusive system needed to be used. On the other hand, in recent years, the progress speed of the capability of the video game console or the graphics board for PC has a remarkable thing reflecting the expansion tendency of TV game market in and outside the country. Especially, the ''programmable shader'' technology in which the several graphics chip maker has started implementation is the innovative technology which can also be called change of generation of real-time 3D graphics, and the scope of the visual expression technique has spread greatly. However, it cannot say that the development/use environment of software which used programmable shader are fully generalized, and the present condition is that the grope of the applied technology to overly the ultra high-speed/quality visualization of large-scale data is not prograssing. We provide the outline of programmable shader technology and consider the possibility of the application to large-scale data visualization. (author)

  17. 3D Markov Process for Traffic Flow Prediction in Real-Time.

    Science.gov (United States)

    Ko, Eunjeong; Ahn, Jinyoung; Kim, Eun Yi

    2016-01-25

    Recently, the correct estimation of traffic flow has begun to be considered an essential component in intelligent transportation systems. In this paper, a new statistical method to predict traffic flows using time series analyses and geometric correlations is proposed. The novelty of the proposed method is two-fold: (1) a 3D heat map is designed to describe the traffic conditions between roads, which can effectively represent the correlations between spatially- and temporally-adjacent traffic states; and (2) the relationship between the adjacent roads on the spatiotemporal domain is represented by cliques in MRF and the clique parameters are obtained by example-based learning. In order to assess the validity of the proposed method, it is tested using data from expressway traffic that are provided by the Korean Expressway Corporation, and the performance of the proposed method is compared with existing approaches. The results demonstrate that the proposed method can predict traffic conditions with an accuracy of 85%, and this accuracy can be improved further.

  18. Time-dependent 3D simulations of the hemodynamics in a stented coronary artery

    International Nuclear Information System (INIS)

    Faik, Isam; Mongrain, Rosaire; Leask, Richard L; Rodes-Cabau, Josep; Larose, Eric; Bertrand, Olivier

    2007-01-01

    Stenting is becoming the major interventional cardiology procedure worldwide. However restenosis remains a major limitation to the effectiveness of stents. Alterations to the local hemodynamics in the stented segment of the artery could be a potential factor in the development of in-stent restenosis. The characterization of wall shear stress and of blood flow patterns in a stented artery is therefore necessary for a good understanding of the role of hemodynamics in the development of in-stent restenosis. We have used a time-dependent 3D numerical model of a stented coronary artery to study the characteristics of the blood flow and the shear stress distribution. Our results show that the presence of the stent produces significant secondary flow that is limited to an annulus in the near wall region. Low shear stress zones were localized in the vicinity of the struts while the tips of the struts exhibited high values of shear stress. These results support the hypothesis that local hemodynamics may affect the development of in-stent restenosis and could influence the choice of stent geometries for future stent designs

  19. Fast segmentation of stained nuclei in terabyte-scale, time resolved 3D microscopy image stacks.

    Directory of Open Access Journals (Sweden)

    Johannes Stegmaier

    Full Text Available Automated analysis of multi-dimensional microscopy images has become an integral part of modern research in life science. Most available algorithms that provide sufficient segmentation quality, however, are infeasible for a large amount of data due to their high complexity. In this contribution we present a fast parallelized segmentation method that is especially suited for the extraction of stained nuclei from microscopy images, e.g., of developing zebrafish embryos. The idea is to transform the input image based on gradient and normal directions in the proximity of detected seed points such that it can be handled by straightforward global thresholding like Otsu's method. We evaluate the quality of the obtained segmentation results on a set of real and simulated benchmark images in 2D and 3D and show the algorithm's superior performance compared to other state-of-the-art algorithms. We achieve an up to ten-fold decrease in processing times, allowing us to process large data sets while still providing reasonable segmentation results.

  20. 3D Markov Process for Traffic Flow Prediction in Real-Time

    Directory of Open Access Journals (Sweden)

    Eunjeong Ko

    2016-01-01

    Full Text Available Recently, the correct estimation of traffic flow has begun to be considered an essential component in intelligent transportation systems. In this paper, a new statistical method to predict traffic flows using time series analyses and geometric correlations is proposed. The novelty of the proposed method is two-fold: (1 a 3D heat map is designed to describe the traffic conditions between roads, which can effectively represent the correlations between spatially- and temporally-adjacent traffic states; and (2 the relationship between the adjacent roads on the spatiotemporal domain is represented by cliques in MRF and the clique parameters are obtained by example-based learning. In order to assess the validity of the proposed method, it is tested using data from expressway traffic that are provided by the Korean Expressway Corporation, and the performance of the proposed method is compared with existing approaches. The results demonstrate that the proposed method can predict traffic conditions with an accuracy of 85%, and this accuracy can be improved further.

  1. 3D Space-Time Visualization of Player Behaviour in Pervasive Location-Based Games

    Directory of Open Access Journals (Sweden)

    Paul Coulton

    2008-01-01

    Full Text Available Location-based games not only offer new experiences for the players, but also present new challenges for researchers in terms of analyzing player behaviour. Whilst many ethnographical studies have presented useful qualitative insights into this area, there is the potential to both improve support for these studies and to provide more effective representations of the quantitative data that can often be extracted from the game itself in a manner that enables greater understanding. In this paper, we illustrate how combined spatial and temporal information can be represented using the human geographers' technique of space-time paths to provide 3D visualizations of a player's or players' movement. Our analysis of a particular location-based game shows how a richer understanding of overall game play is obtained and highlights the possibilities for using the technique for a whole range of location-based services to provide a more complete view of complexities of journeys. Further, we discuss how these techniques can be utilized more generally by ethnographers who study the behaviour of mobile actors.

  2. Novel pixel architecture with inherent background suppression for 3D time-of-flight imaging

    Science.gov (United States)

    Oggier, Thierry; Kaufmann, Rolf; Lehmann, Michael; Buttgen, Bernhard; Neukom, Simon; Richter, Michael; Schweizer, Matthias; Metzler, Peter; Lustenberger, Felix; Blanc, Nicolas

    2005-01-01

    The time-of-flight (TOF) principle is a well known technology to acquire a scene in all three dimensions. The advantages of the knowledge of the third dimension are obvious for many kinds of applications. The distance information within the scene renders automatic information-processing systems more robust and much less complex or even enables completely new solutions. A solid-state image sensor containing 124x160 pixels and the corresponding 3D-camera, the so-called SwissRanger camera has already been presented in detail. It has been shown that the SwissRanger camera achieves depth resolutions in the sub-centimeter range, corresponding to a measured time resolution of a few tens of picoseconds with respect to the speed of light. However, one main drawback of these so-called lock-in TOF pixels is their limited capacity to handle background illumination. Keeping in mind that in outdoor applications the optical power on the sensor originating from background illumination such as sunlight may be up to a few 100 times higher than the power of the modulated illumination, the sensor requires new pixel structures eliminating or at least reducing the currently experienced restrictions in terms of background illumination. Based on a custom 0.6um CMOS/CCD technology, a new pixel architecture suppressing background illumination and/or improving the ratio of modulated signal to background signal at the pixel-output level was developed and will be presented in this paper. The theoretical principle of operation and the expected performance measures are described. Furthermore, test results obtained in a laboratory setup are published. The sensor structure is characterized in a high background-light environment. This in-depth evaluation leads to a comparison of the background suppression approach with the traditional pixel structure in order to highlight the benefits of the new approach.

  3. Efficient near-real-time monitoring of 3D surface displacements in complex landslide scenarios

    Science.gov (United States)

    Allasia, Paolo; Manconi, Andrea; Giordan, Daniele; Baldo, Marco; Lollino, Giorgio

    2013-04-01

    Ground deformation measurements play a key role in monitoring activities of landslides. A wide spectrum of instruments and methods is nowadays available, going from in-situ to remote sensing approaches. In emergency scenarios, monitoring is often based on automated instruments capable to achieve accurate measurements, possibly with a very high temporal resolution, in order to achieve the best information about the evolution of the landslide in near-real-time, aiming at early warning purposes. However, the available tools for a rapid and efficient exploitation, understanding and interpretation of the retrieved measurements is still a challenge. This issue is particularly relevant in contexts where monitoring is fundamental to support early warning systems aimed at ensuring safety to people and/or infrastructures. Furthermore, in many cases the results obtained might be of difficult reading and divulgation, especially when people of different backgrounds are involved (e.g. scientists, authorities, civil protection operators, decision makers, etc.). In this work, we extend the concept of automatic and near real time from the acquisition of measurements to the data processing and divulgation, in order to achieve an efficient monitoring of surface displacements in landslide scenarios. We developed an algorithm that allows to go automatically and in near-real-time from the acquisition of 3D displacements on a landslide area to the efficient divulgation of the monitoring results via WEB. This set of straightforward procedures is called ADVICE (ADVanced dIsplaCement monitoring system for Early warning), and has been already successfully applied in several emergency scenarios. The algorithm includes: (i) data acquisition and transfer protocols; (ii) data collection, filtering, and validation; (iii) data analysis and restitution through a set of dedicated software, such as ©3DA [1]; (iv) recognition of displacement/velocity threshold and early warning (v) short term

  4. 3D landslide motion from a UAV-derived time-series of morphological attributes

    Science.gov (United States)

    Valasia Peppa, Maria; Mills, Jon Philip; Moore, Philip; Miller, Pauline; Chambers, Jon

    2017-04-01

    Landslides are recognised as dynamic and significantly hazardous phenomena. Time-series observations can improve the understanding of a landslide's complex behaviour and aid assessment of its geometry and kinematics. Conventional quantification of landslide motion involves the installation of survey markers into the ground at discrete locations and periodic observations over time. However, such surveying is labour intensive, provides limited spatial resolution, is occasionally hazardous for steep terrain, or even impossible for inaccessible mountainous areas. The emergence of mini unmanned aerial vehicles (UAVs) equipped with off-the-shelf compact cameras, alongside the structure-from-motion (SfM) photogrammetric pipeline and modern pixel-based matching approaches, has expedited the automatic generation of high resolution digital elevation models (DEMs). Moreover, cross-correlation functions applied to finely co-registered consecutive orthomosaics and/or DEMs have been widely used to determine the displacement of moving features in an automated way, resulting in high spatial resolution motion vectors. This research focuses on estimating the 3D displacement field of an active slow moving earth-slide earth-flow landslide located in Lias mudrocks of North Yorkshire, UK, with the ultimate aim of assessing landslide deformation patterns. The landslide extends approximately 290 m E-W and 230 m N-S, with an average slope of 12˚ and 50 m elevation difference from N-S. Cross-correlation functions were applied to an eighteen-month duration, UAV-derived, time-series of morphological attributes in order to determine motion vectors for subsequent landslide analysis. A self-calibrating bundle adjustment was firstly incorporated into the SfM pipeline and utilised to process imagery acquired using a Panasonic Lumix DMC-LX5 compact camera from a mini fixed-wing Quest 300 UAV, with 2 m wingspan and maximum 5 kg payload. Data from six field campaigns were used to generate a DEM time

  5. Real-time automated 3D sensing, detection, and recognition of dynamic biological micro-organic events

    Science.gov (United States)

    Javidi, Bahram; Yeom, Seokwon; Moon, Inkyu; Daneshpanah, Mehdi

    2006-05-01

    In this paper, we present an overview of three-dimensional (3D) optical imaging techniques for real-time automated sensing, visualization, and recognition of dynamic biological microorganisms. Real time sensing and 3D reconstruction of the dynamic biological microscopic objects can be performed by single-exposure on-line (SEOL) digital holographic microscopy. A coherent 3D microscope-based interferometer is constructed to record digital holograms of dynamic micro biological events. Complex amplitude 3D images of the biological microorganisms are computationally reconstructed at different depths by digital signal processing. Bayesian segmentation algorithms are applied to identify regions of interest for further processing. A number of pattern recognition approaches are addressed to identify and recognize the microorganisms. One uses 3D morphology of the microorganisms by analyzing 3D geometrical shapes which is composed of magnitude and phase. Segmentation, feature extraction, graph matching, feature selection, and training and decision rules are used to recognize the biological microorganisms. In a different approach, 3D technique is used that are tolerant to the varying shapes of the non-rigid biological microorganisms. After segmentation, a number of sampling patches are arbitrarily extracted from the complex amplitudes of the reconstructed 3D biological microorganism. These patches are processed using a number of cost functions and statistical inference theory for the equality of means and equality of variances between the sampling segments. Also, we discuss the possibility of employing computational integral imaging for 3D sensing, visualization, and recognition of biological microorganisms illuminated under incoherent light. Experimental results with several biological microorganisms are presented to illustrate detection, segmentation, and identification of micro biological events.

  6. Real-Time Climate Simulations in the Interactive 3D Game Universe Sandbox ²

    Science.gov (United States)

    Goldenson, N. L.

    2014-12-01

    Exploration in an open-ended computer game is an engaging way to explore climate and climate change. Everyone can explore physical models with real-time visualization in the educational simulator Universe Sandbox ² (universesandbox.com/2), which includes basic climate simulations on planets. I have implemented a time-dependent, one-dimensional meridional heat transport energy balance model to run and be adjustable in real time in the midst of a larger simulated system. Universe Sandbox ² is based on the original game - at its core a gravity simulator - with other new physically-based content for stellar evolution, and handling collisions between bodies. Existing users are mostly science enthusiasts in informal settings. We believe that this is the first climate simulation to be implemented in a professionally developed computer game with modern 3D graphical output in real time. The type of simple climate model we've adopted helps us depict the seasonal cycle and the more drastic changes that come from changing the orbit or other external forcings. Users can alter the climate as the simulation is running by altering the star(s) in the simulation, dragging to change orbits and obliquity, adjusting the climate simulation parameters directly or changing other properties like CO2 concentration that affect the model parameters in representative ways. Ongoing visuals of the expansion and contraction of sea ice and snow-cover respond to the temperature calculations, and make it accessible to explore a variety of scenarios and intuitive to understand the output. Variables like temperature can also be graphed in real time. We balance computational constraints with the ability to capture the physical phenomena we wish to visualize, giving everyone access to a simple open-ended meridional energy balance climate simulation to explore and experiment with. The software lends itself to labs at a variety of levels about climate concepts including seasons, the Greenhouse effect

  7. 3D Printing in the Laboratory: Maximize Time and Funds with Customized and Open-Source Labware.

    Science.gov (United States)

    Coakley, Meghan; Hurt, Darrell E

    2016-08-01

    3D printing, also known as additive manufacturing, is the computer-guided process of fabricating physical objects by depositing successive layers of material. It has transformed manufacturing across virtually every industry, bringing about incredible advances in research and medicine. The rapidly growing consumer market now includes convenient and affordable "desktop" 3D printers. These are being used in the laboratory to create custom 3D-printed equipment, and a growing community of designers are contributing open-source, cost-effective innovations that can be used by both professionals and enthusiasts. User stories from investigators at the National Institutes of Health and the biomedical research community demonstrate the power of 3D printing to save valuable time and funding. While adoption of 3D printing has been slow in the biosciences to date, the potential is vast. The market predicts that within several years, 3D printers could be commonplace within the home; with so many practical uses for 3D printing, we anticipate that the technology will also play an increasingly important role in the laboratory. © 2016 Society for Laboratory Automation and Screening.

  8. "Just-In-Time" Simulation Training Using 3-D Printed Cardiac Models After Congenital Cardiac Surgery.

    Science.gov (United States)

    Olivieri, Laura J; Su, Lillian; Hynes, Conor F; Krieger, Axel; Alfares, Fahad A; Ramakrishnan, Karthik; Zurakowski, David; Marshall, M Blair; Kim, Peter C W; Jonas, Richard A; Nath, Dilip S

    2016-03-01

    High-fidelity simulation using patient-specific three-dimensional (3D) models may be effective in facilitating pediatric cardiac intensive care unit (PCICU) provider training for clinical management of congenital cardiac surgery patients. The 3D-printed heart models were rendered from preoperative cross-sectional cardiac imaging for 10 patients undergoing congenital cardiac surgery. Immediately following surgical repair, a congenital cardiac surgeon and an intensive care physician conducted a simulation training session regarding postoperative care utilizing the patient-specific 3D model for the PCICU team. After the simulation, Likert-type 0 to 10 scale questionnaire assessed participant perception of impact of the training session. Seventy clinicians participated in training sessions, including 22 physicians, 38 nurses, and 10 ancillary care providers. Average response to whether 3D models were more helpful than standard hand off was 8.4 of 10. Questions regarding enhancement of understanding and clinical ability received average responses of 9.0 or greater, and 90% of participants scored 8 of 10 or higher. Nurses scored significantly higher than other clinicians on self-reported familiarity with the surgery (7.1 vs. 5.8; P = .04), clinical management ability (8.6 vs. 7.7; P = .02), and ability enhancement (9.5 vs. 8.7; P = .02). Compared to physicians, nurses and ancillary providers were more likely to consider 3D models more helpful than standard hand off (8.7 vs. 7.7; P = .05). Higher case complexity predicted greater enhancement of understanding of surgery (P = .04). The 3D heart models can be used to enhance congenital cardiac critical care via simulation training of multidisciplinary intensive care teams. Benefit may be dependent on provider type and case complexity. © The Author(s) 2016.

  9. L1 track finding for a time multiplexed trigger

    Energy Technology Data Exchange (ETDEWEB)

    Cieri, D., E-mail: davide.cieri@bristol.ac.uk [University of Bristol, Bristol (United Kingdom); Rutherford Appleton Laboratory, Didcot (United Kingdom); Brooke, J.; Grimes, M. [University of Bristol, Bristol (United Kingdom); Newbold, D. [University of Bristol, Bristol (United Kingdom); Rutherford Appleton Laboratory, Didcot (United Kingdom); Harder, K.; Shepherd-Themistocleous, C.; Tomalin, I. [Rutherford Appleton Laboratory, Didcot (United Kingdom); Vichoudis, P. [CERN, Geneva (Switzerland); Reid, I. [Brunel University, London (United Kingdom); Iles, G.; Hall, G.; James, T.; Pesaresi, M.; Rose, A.; Tapper, A.; Uchida, K. [Imperial College, London (United Kingdom)

    2016-07-11

    At the HL-LHC, proton bunches will cross each other every 25 ns, producing an average of 140 pp-collisions per bunch crossing. To operate in such an environment, the CMS experiment will need a L1 hardware trigger able to identify interesting events within a latency of 12.5 μs. The future L1 trigger will make use also of data coming from the silicon tracker to control the trigger rate. The architecture that will be used in future to process tracker data is still under discussion. One interesting proposal makes use of the Time Multiplexed Trigger concept, already implemented in the CMS calorimeter trigger for the Phase I trigger upgrade. The proposed track finding algorithm is based on the Hough Transform method. The algorithm has been tested using simulated pp-collision data. Results show a very good tracking efficiency. The algorithm will be demonstrated in hardware in the coming months using the MP7, which is a μTCA board with a powerful FPGA capable of handling data rates approaching 1 Tb/s.

  10. L1 Track Finding for a Time Multiplexed Trigger

    CERN Document Server

    AUTHOR|(CDS)2090481; Grimes, M.; Newbold, D.; Harder, K.; Shepherd-Themistocleous, C.; Tomalin, I.; Vichoudis, P.; Reid, I.; Iles, G.; Hall, G.; James, T.; Pesaresi, M.; Rose, A.; Tapper, A.; Uchida, K.

    2016-01-01

    At the HL-LHC, proton bunches will cross each other every 25 ns, producing an average of 140 p p-collisions per bunch crossing. To operate in such an environment, the CMS experiment will need a L1 hardware trigger able to identify interesting events within a latency of 12.5 us. The future L1 trigger will make use also of data coming from the silicon tracker to control the trigger rate. The architecture that will be used in future to process tracker data is still under discussion. One interesting proposal makes use of the Time Multiplexed Trigger concept, already implemented in the CMS calorimeter trigger for the Phase I trigger upgrade. The proposed track finding algorithm is based on the Hough Transform method. The algorithm has been tested using simulated pp-collision data. Results show a very good tracking efficiency. The algorithm will be demonstrated in hardware in the coming months using the MP7, which is a uTCA board with a powerful FPGA capable of handling data rates approaching 1 Tb/s.

  11. A full 3D time-dependent electromagnetic model for Roebel cables

    DEFF Research Database (Denmark)

    Rodriguez Zermeno, Victor Manuel; Grilli, Francesco; Sirois, Frederic

    2013-01-01

    High temperature superconductor Roebel cables are well known for their large current capacity and low AC losses. For this reason they have become attractive candidates for many power applications. The continuous transposition of their strands reduces the coupling losses while ensuring better...... current sharing among them. However, since Roebel cables have a true 3D structure and are made of several high aspect ratio coated conductors, modelling and simulation of their electromagnetic properties is very challenging. Therefore, a realistic model taking into account the actual layout of the cable...... layout, this work represents a further step into achieving 3D simulation of superconducting devices for real applications....

  12. Lagrangian Finite Element Method for 3D time-dependent viscoelastic flow computation using integral constitutive models

    DEFF Research Database (Denmark)

    Rasmussen, Henrik Koblitz

    2000-01-01

    A new technique for the numerical 3D simulation of time dependent flow of viscoelastic fluid is presented. The technique is based on a Lagrangian kinematics description of the fluid flow. The fluid is described by the Rivlin Sawyer integral constitutive equation. The method (referred to as the 3D...... Lagrangian Integral Method) is a finite element method where Galerkons method is used for solving the governing equation in rectangular coordinates numerically. In the present implementation the velocity and pressure fields are approximated with tri-linear and constant shape functions, respectivly.The 3D LIM......) and polymeric solutions. Secondly, the 3D-LIM has also been applied to calculate the inflation of a thick sheet of a polymeric melt into a elliptic cylinder. These problems all include free surfaces. As the governing equations are solved for the particle positions, the motion of surfaces can be followed easily...

  13. Real-Time Large Scale 3d Reconstruction by Fusing Kinect and Imu Data

    Science.gov (United States)

    Huai, J.; Zhang, Y.; Yilmaz, A.

    2015-08-01

    Kinect-style RGB-D cameras have been used to build large scale dense 3D maps for indoor environments. These maps can serve many purposes such as robot navigation, and augmented reality. However, to generate dense 3D maps of large scale environments is still very challenging. In this paper, we present a mapping system for 3D reconstruction that fuses measurements from a Kinect and an inertial measurement unit (IMU) to estimate motion. Our major achievements include: (i) Large scale consistent 3D reconstruction is realized by volume shifting and loop closure; (ii) The coarse-to-fine iterative closest point (ICP) algorithm, the SIFT odometry, and IMU odometry are combined to robustly and precisely estimate pose. In particular, ICP runs routinely to track the Kinect motion. If ICP fails in planar areas, the SIFT odometry provides incremental motion estimate. If both ICP and the SIFT odometry fail, e.g., upon abrupt motion or inadequate features, the incremental motion is estimated by the IMU. Additionally, the IMU also observes the roll and pitch angles which can reduce long-term drift of the sensor assembly. In experiments on a consumer laptop, our system estimates motion at 8Hz on average while integrating color images to the local map and saving volumes of meshes concurrently. Moreover, it is immune to tracking failures, and has smaller drift than the state-of-the-art systems in large scale reconstruction.

  14. Embedded, real-time UAV control for improved, image-based 3D scene reconstruction

    Science.gov (United States)

    Jean Liénard; Andre Vogs; Demetrios Gatziolis; Nikolay Strigul

    2016-01-01

    Unmanned Aerial Vehicles (UAVs) are already broadly employed for 3D modeling of large objects such as trees and monuments via photogrammetry. The usual workflow includes two distinct steps: image acquisition with UAV and computationally demanding postflight image processing. Insufficient feature overlaps across images is a common shortcoming in post-flight image...

  15. Real-time, high-accuracy 3D imaging and shape measurement.

    Science.gov (United States)

    Nguyen, Hieu; Nguyen, Dung; Wang, Zhaoyang; Kieu, Hien; Le, Minh

    2015-01-01

    In spite of the recent advances in 3D shape measurement and geometry reconstruction, simultaneously achieving fast-speed and high-accuracy performance remains a big challenge in practice. In this paper, a 3D imaging and shape measurement system is presented to tackle such a challenge. The fringe-projection-profilometry-based system employs a number of advanced approaches, such as: composition of phase-shifted fringe patterns, externally triggered synchronization of system components, generalized system setup, ultrafast phase-unwrapping algorithm, flexible system calibration method, robust gamma correction scheme, multithread computation and processing, and graphics-processing-unit-based image display. Experiments have shown that the proposed system can acquire and display high-quality 3D reconstructed images and/or video stream at a speed of 45 frames per second with relative accuracy of 0.04% or at a reduced speed of 22.5 frames per second with enhanced accuracy of 0.01%. The 3D imaging and shape measurement system shows great promise of satisfying the ever-increasing demands of scientific and engineering applications.

  16. Flow-through PCR on a 3D qiandu-shaped polydimethylsiloxane (PDMS) microdevice employing a single heater: toward microscale multiplex PCR.

    Science.gov (United States)

    Wu, Wenming; Loan, Kieu The Loan; Lee, Nae Yoon

    2012-05-07

    Consistent temperature control in an on-chip flow-through polymerase chain reaction (PCR) employing two or more heaters is one of the main obstacles for device miniaturization and integration when realizing micro total analysis systems (μTAS), and also leads to operational complexity. In this study, we propose a qiandu (right triangular prism)-shaped polydimethylsiloxane (PDMS) microdevice with serpentine microchannels fabricated on its slanted plane, and apply the device for an on-chip flow-through PCR employing a single heater. The inclined nature of the qiandu-shaped microdevice enables the formation of a surface temperature gradient along the slanted plane of the microdevice in a height-dependent manner by the use of a single heater, and enables liquid to traverse over wide ranges of temperatures, including the three temperature zones--denaturation, annealing, and extension temperatures--required in a typical PCR. The feasibility of the qiandu-shaped PDMS microdevice as a versatile platform for performing a flow-through PCR was examined by employing multiple templates and varying the inclination angle of the device. In addition, the potential of performing a multiplex PCR using a single qiandu-shaped PDMS microdevice was explored. A 409 bp long gene fragment effective as a marker for diagnosing lung cancer and a 230 bp long gene fragment from a plasmid vector were simultaneously amplified in less than 25 min on a single microdevice, paving the way for a microscale, multiplex PCR on a single device employing a single heater.

  17. Time-resolved fuel injector flow characterisation based on 3D laser Doppler vibrometry

    Science.gov (United States)

    Crua, Cyril; Heikal, Morgan R.

    2014-12-01

    Hydrodynamic turbulence and cavitation are known to play a significant role in high-pressure atomizers, but the small geometries and extreme operating conditions hinder the understanding of the flow’s characteristics. Diesel internal flow experiments are generally conducted using x-ray techniques or on transparent, and often enlarged, nozzles with different orifice geometries and surface roughness to those found in production injectors. In order to enable investigations of the fuel flow inside unmodified injectors, we have developed a new experimental approach to measure time-resolved vibration spectra of diesel nozzles using a 3D laser vibrometer. The technique we propose is based on the triangulation of the vibrometer and fuel pressure transducer signals, and enables the quantitative characterisation of quasi-cyclic internal flows without requiring modifications to the injector, the working fluid, or limiting the fuel injection pressure. The vibrometer, which uses the Doppler effect to measure the velocity of a vibrating object, was used to scan injector nozzle tips during the injection event. The data were processed using a discrete Fourier transform to provide time-resolved spectra for valve-closed-orifice, minisac and microsac nozzle geometries, and injection pressures ranging from 60 to 160 MPa, hence offering unprecedented insight into cyclic cavitation and internal mechanical dynamic processes. A peak was consistently found in the spectrograms between 6 and 7.5 kHz for all nozzles and injection pressures. Further evidence of a similar spectral peak was obtained from the fuel pressure transducer and a needle lift sensor mounted into the injector body. Evidence of propagation of the nozzle oscillations to the liquid sprays was obtained by recording high-speed videos of the near-nozzle diesel jet, and computing the fast Fourier transform for a number of pixel locations at the interface of the jets. This 6-7.5 kHz frequency peak is proposed to be the

  18. With the advent of domestic 3-dimensional (3D) printers and their associated reduced cost, is it now time for every medical school to have their own 3D printer?

    Science.gov (United States)

    Balestrini, Christopher; Campo-Celaya, Tatiana

    2016-01-01

    Anatomy is the backbone of medical education and new techniques to improve learning are frequently explored. With the introduction of 3D printers specifically for the home market, the price of this technology has reached affordable levels. Using patient scan data, accurate 3D models can be printed that represent real human variation in anatomy to provide an innovative, inexpensive and valuable adjunct to anatomical teaching. Is it now time for every medical school to have their own 3D printer?

  19. TIPS Placement in Swine, Guided by Electromagnetic Real-Time Needle Tip Localization Displayed on Previously Acquired 3-D CT

    International Nuclear Information System (INIS)

    Solomon, Stephen B.; Magee, Carolyn; Acker, David E.; Venbrux, Anthony C.

    1999-01-01

    Purpose: To determine the feasibility of guiding a transjugular intrahepatic portosystemic shunt (TIPS) procedure with an electromagnetic real-time needle tip position sensor coupled to previously acquired 3-dimensional (3-D) computed tomography (CT) images. Methods: An electromagnetic position sensor was placed at the tip of a Colapinto needle. The real-time position and orientation of the needle tip was then displayed on previously acquired 3-D CT images which were registered with the five swine. Portal vein puncture was then attempted in all animals. Results: The computer calculated accuracy of the position sensor was on average 3 mm. Four of five portal vein punctures were successful. In the successes, only one or two attempts were necessary and success was achieved in minutes. Conclusion: A real-time position sensor attached to the tip of a Colapinto needle and coupled to previously acquired 3-D CT images may potentially aid in entering the portal vein during the TIPS procedure

  20. Time-division multiplexing vs network calculus: A comparison

    DEFF Research Database (Denmark)

    Puffitsch, Wolfgang; Sørensen, Rasmus Bo; Schoeberl, Martin

    2015-01-01

    -division multiplexing, where traffic is scheduled according to a precalculated static schedule, and network calculus, a mathematical framework to reason about dynamically scheduled networks. This paper compares the two approaches to provide insight into their relative advantages and disadvantages. The results show...

  1. A multi-frequency electrical impedance tomography system for real-time 2D and 3D imaging

    Science.gov (United States)

    Yang, Yunjie; Jia, Jiabin

    2017-08-01

    This paper presents the design and evaluation of a configurable, fast multi-frequency Electrical Impedance Tomography (mfEIT) system for real-time 2D and 3D imaging, particularly for biomedical imaging. The system integrates 32 electrode interfaces and the current frequency ranges from 10 kHz to 1 MHz. The system incorporates the following novel features. First, a fully adjustable multi-frequency current source with current monitoring function is designed. Second, a flexible switching scheme is developed for arbitrary sensing configuration and a semi-parallel data acquisition architecture is implemented for high-frame-rate data acquisition. Furthermore, multi-frequency digital quadrature demodulation is accomplished in a high-capacity Field Programmable Gate Array. At last, a 3D imaging software, visual tomography, is developed for real-time 2D and 3D image reconstruction, data analysis, and visualization. The mfEIT system is systematically tested and evaluated from the aspects of signal to noise ratio (SNR), frame rate, and 2D and 3D multi-frequency phantom imaging. The highest SNR is 82.82 dB on a 16-electrode sensor. The frame rate is up to 546 fps at serial mode and 1014 fps at semi-parallel mode. The evaluation results indicate that the presented mfEIT system is a powerful tool for real-time 2D and 3D imaging.

  2. Interlaboratory study of DNA extraction from multiple ground samples, multiplex real-time PCR, and multiplex qualitative PCR for individual kernel detection system of genetically modified maize.

    Science.gov (United States)

    Akiyama, Hiroshi; Sakata, Kozue; Makiyma, Daiki; Nakamura, Kosuke; Teshima, Reiko; Nakashima, Akie; Ogawa, Asako; Yamagishi, Toru; Futo, Satoshi; Oguchi, Taichi; Mano, Junichi; Kitta, Kazumi

    2011-01-01

    In many countries, the labeling of grains, feed, and foodstuff is mandatory if the genetically modified (GM) organism content exceeds a certain level of approved GM varieties. We previously developed an individual kernel detection system consisting of grinding individual kernels, DNA extraction from the individually ground kernels, GM detection using multiplex real-time PCR, and GM event detection using multiplex qualitative PCR to analyze the precise commingling level and varieties of GM maize in real sample grains. We performed the interlaboratory study of the DNA extraction with multiple ground samples, multiplex real-time PCR detection, and multiplex qualitative PCR detection to evaluate its applicability, practicality, and ruggedness for the individual kernel detection system of GM maize. DNA extraction with multiple ground samples, multiplex real-time PCR, and multiplex qualitative PCR were evaluated by five laboratories in Japan, and all results from these laboratories were consistent with the expected results in terms of the commingling level and event analysis. Thus, the DNA extraction with multiple ground samples, multiplex real-time PCR, and multiplex qualitative PCR for the individual kernel detection system is applicable and practicable in a laboratory to regulate the commingling level of GM maize grain for GM samples, including stacked GM maize.

  3. tavg3_3d_chm_Fe: MERRA Chem 3D IAU, Precip Mass Flux, Time average 3-hourly 1.25 x 1 degree V5.2.0 (MAT3FECHM) at GES DISC

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3FECHM or tavg3_3d_chm_Fe data product is the MERRA Data Assimilation System Chemistry 3-Dimensional chemistry on layers edges that is time averaged, 3D model...

  4. tavg3_3d_chm_Fv: MERRA Chem 3D IAU States Cloud Precip, Time average 3-hourly 1.25 x 1.25 degree V5.2.0 (MAT3FVCHM) at GES DISC

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3FVCHM or tavg3_3d_chm_Fv data product is the MERRA Data Assimilation System Chemistry 3-Dimensional chemistry on layers file that is time averaged, 3D model...

  5. Real-time integration of 2D intracardiac echocardiography and 3D electroanatomical mapping to guide ventricular tachycardia ablation.

    Science.gov (United States)

    Khaykin, Yaariv; Skanes, Allan; Whaley, Bonnie; Hill, Carol; Beardsall, Marianne; Seabrook, Catherine; Wulffhart, Zaev; Oosthuizen, Richard; Gula, Lorne; Verma, Atul

    2008-10-01

    Ablation of left ventricular tachycardia (LV VT) involves point-by-point reconstruction of the three-dimensional (3D) virtual anatomy. It is time consuming and requires substantial fluoroscopy exposure. Two-dimensional (2D) intracardiac echocardiography (ICE) affords real-time imaging of the cardiac structures. This study sought to evaluate a mapping system integrating ICE with 3D mapping to guide VT ablation. Seventeen patients (16 men, 62 +/- 11 years, LV ejection fraction 40% +/- 15%) had ablation of nonidiopathic VT guided using a system integrating 3D mapping and ICE. ICE probe with a location sensor tracked by the mapping system was positioned in the right heart. Endocardial contours traced on gated images of the LV were used to generate a registered 3D map. Regional wall motion abnormalities (WMA) were tagged. 3D maps were created in 26 +/- 8 min, before entering the LV and without fluoroscopy. Maps were built from 23 +/- 7 contours. Regional WMA corresponded to low bipolar voltage (ICE was 172 +/- 119 cm(3) versus 164 +/- 112 cm(3) for the point-by-point maps (P = .5). Scar area by ICE was 33 +/- 32 cm(2) versus 36 +/- 33 cm(2) for voltage mapping (P = .4). At 5 +/- 4 months, 12 patients (71%) were free of VT. A system combining 2D ICE and 3D mapping can reconstruct a 3D shell of the LV, including a substrate map based on regional WMA without the need to enter the LV. VT ablation guided using this approach is safe and effective.

  6. Capacity of Wavelength and Time Division Multiplexing for Quasi-Distributed Measurement Using Fiber Bragg Gratings

    Directory of Open Access Journals (Sweden)

    Marcel Fajkus

    2015-01-01

    Full Text Available In this paper, an analysis of the use of wavelength and time division multiplexing techniques for quasi-distributed measurement in uniform fiber Bragg gratings is presented. To date, publications have concentrated on the determination of the maximum number of fiber Bragg gratings on one optical fiber using wavelength and time division multiplexing. In this paper, these techniques will be extended to determine the spectral width of wavelength division multiplexing in terms of the spectral width of the light emitting diode, the spectral width of the Bragg gratings, the measurement ranges of the individual sensors, and the guard band between two adjacent Bragg gratings. For time division multiplexing, a description of the time and power conditions are given. In particular the reflected power, first order crosstalk and chromatic dispersion have been considered. Finally, these relationships were applied to verify a design in a simulation using OptiSystem software.

  7. Dose- and Time-Dependent Cellular Effects of Cold Atmospheric Pressure Plasma Evaluated in 3D Skin Models.

    Science.gov (United States)

    Wiegand, Cornelia; Fink, Sarah; Beier, Oliver; Horn, Kerstin; Pfuch, Andreas; Schimanski, Arnd; Grünler, Bernd; Hipler, Uta-Christina; Elsner, Peter

    2016-01-01

    Application of cold atmospheric pressure plasmas (CAPs) in or on the human body was termed 'plasma medicine'. So far, plasmas were utilized for sterilization of implants, other heat-sensitive products, or employed for chemical surface modifications. By now, CAPs are further used effectively for wound treatment. The present study analyses the effect of a plasma jet with air or nitrogen as process gas, previously evaluated for antimicrobial efficacy, on human cells using a 3D skin model. CAP treatment of 3D skin models consisting of a keratinocyte-containing epidermal layer and a fibroblast/collagen dermal matrix was performed using the Tigres plasma MEF technology. To evaluate the effects on the 3D skin models, the following plasma parameters were varied: process gas, input power, and treatment time. Low CAP doses exhibited good cell compatibility. Increasing input power or elongating treatment intervals led to detrimental effects on 3D skin model morphology as well as to release of inflammatory cytokines. It was further observed that air as process gas was more damaging compared to nitrogen. Treatment of 3D skin models with the plasma MEF nozzle using air or nitrogen is reported. A clearly dose- and time-dependent effect of CAPs could be observed in which the CAP based on nitrogen exhibited higher cell compatibility than the CAP generated from air. These settings might be recommended for medical in vivo applications such as wound decontamination. © 2016 S. Karger AG, Basel.

  8. Learning dictionaries of sparse codes of 3D movements of body joints for real-time human activity understanding.

    Science.gov (United States)

    Qi, Jin; Yang, Zhiyong

    2014-01-01

    Real-time human activity recognition is essential for human-robot interactions for assisted healthy independent living. Most previous work in this area is performed on traditional two-dimensional (2D) videos and both global and local methods have been used. Since 2D videos are sensitive to changes of lighting condition, view angle, and scale, researchers begun to explore applications of 3D information in human activity understanding in recently years. Unfortunately, features that work well on 2D videos usually don't perform well on 3D videos and there is no consensus on what 3D features should be used. Here we propose a model of human activity recognition based on 3D movements of body joints. Our method has three steps, learning dictionaries of sparse codes of 3D movements of joints, sparse coding, and classification. In the first step, space-time volumes of 3D movements of body joints are obtained via dense sampling and independent component analysis is then performed to construct a dictionary of sparse codes for each activity. In the second step, the space-time volumes are projected to the dictionaries and a set of sparse histograms of the projection coefficients are constructed as feature representations of the activities. Finally, the sparse histograms are used as inputs to a support vector machine to recognize human activities. We tested this model on three databases of human activities and found that it outperforms the state-of-the-art algorithms. Thus, this model can be used for real-time human activity recognition in many applications.

  9. Learning dictionaries of sparse codes of 3D movements of body joints for real-time human activity understanding.

    Directory of Open Access Journals (Sweden)

    Jin Qi

    Full Text Available Real-time human activity recognition is essential for human-robot interactions for assisted healthy independent living. Most previous work in this area is performed on traditional two-dimensional (2D videos and both global and local methods have been used. Since 2D videos are sensitive to changes of lighting condition, view angle, and scale, researchers begun to explore applications of 3D information in human activity understanding in recently years. Unfortunately, features that work well on 2D videos usually don't perform well on 3D videos and there is no consensus on what 3D features should be used. Here we propose a model of human activity recognition based on 3D movements of body joints. Our method has three steps, learning dictionaries of sparse codes of 3D movements of joints, sparse coding, and classification. In the first step, space-time volumes of 3D movements of body joints are obtained via dense sampling and independent component analysis is then performed to construct a dictionary of sparse codes for each activity. In the second step, the space-time volumes are projected to the dictionaries and a set of sparse histograms of the projection coefficients are constructed as feature representations of the activities. Finally, the sparse histograms are used as inputs to a support vector machine to recognize human activities. We tested this model on three databases of human activities and found that it outperforms the state-of-the-art algorithms. Thus, this model can be used for real-time human activity recognition in many applications.

  10. The Value of 3D Printing Models of Left Atrial Appendage Using Real-Time 3D Transesophageal Echocardiographic Data in Left Atrial Appendage Occlusion: Applications toward an Era of Truly Personalized Medicine.

    Science.gov (United States)

    Liu, Peng; Liu, Rijing; Zhang, Yan; Liu, Yingfeng; Tang, Xiaoming; Cheng, Yanzhen

    The objective of this study was to assess the clinical feasibility of generating 3D printing models of left atrial appendage (LAA) using real-time 3D transesophageal echocardiogram (TEE) data for preoperative reference of LAA occlusion. Percutaneous LAA occlusion can effectively prevent patients with atrial fibrillation from stroke. However, the anatomical structure of LAA is so complicated that adequate information of its structure is essential for successful LAA occlusion. Emerging 3D printing technology has the demonstrated potential to structure more accurately than conventional imaging modalities by creating tangible patient-specific models. Typically, 3D printing data sets are acquired from CT and MRI, which may involve intravenous contrast, sedation, and ionizing radiation. It has been reported that 3D models of LAA were successfully created by the data acquired from CT. However, 3D printing of the LAA using real-time 3D TEE data has not yet been explored. Acquisition of 3D transesophageal echocardiographic data from 8 patients with atrial fibrillation was performed using the Philips EPIQ7 ultrasound system. Raw echocardiographic image data were opened in Philips QLAB and converted to 'Cartesian DICOM' format and imported into Mimics® software to create 3D models of LAA, which were printed using a rubber-like material. The printed 3D models were then used for preoperative reference and procedural simulation in LAA occlusion. We successfully printed LAAs of 8 patients. Each LAA costs approximately CNY 800-1,000 and the total process takes 16-17 h. Seven of the 8 Watchman devices predicted by preprocedural 2D TEE images were of the same sizes as those placed in the real operation. Interestingly, 3D printing models were highly reflective of the shape and size of LAAs, and all device sizes predicted by the 3D printing model were fully consistent with those placed in the real operation. Also, the 3D printed model could predict operating difficulty and the

  11. Application of 3D WebGIS and real-time technique in earthquake information publishing and visualization

    Science.gov (United States)

    Li, Boren; Wu, Jianping; Pan, Mao; Huang, Jing

    2015-06-01

    In hazard management, earthquake researchers have utilized GIS to ease the process of managing disasters. Researchers use WebGIS to assess hazards and seismic risk. Although they can provide a visual analysis platform based on GIS technology, they lack a general description in the extensibility of WebGIS for processing dynamic data, especially real-time data. In this paper, we propose a novel approach for real-time 3D visual earthquake information publishing model based on WebGIS and digital globe to improve the ability of processing real-time data in systems based on WebGIS. On the basis of the model, we implement a real-time 3D earthquake information publishing system—EqMap3D. The system can not only publish real-time earthquake information but also display these data and their background geoscience information in a 3D scene. It provides a powerful tool for display, analysis, and decision-making for researchers and administrators. It also facilitates better communication between researchers engaged in geosciences and the interested public.

  12. Rapid diagnosis of sepsis with TaqMan-Based multiplex real-time PCR.

    Science.gov (United States)

    Liu, Chang-Feng; Shi, Xin-Ping; Chen, Yun; Jin, Ye; Zhang, Bing

    2018-02-01

    The survival rate of septic patients mainly depends on a rapid and reliable diagnosis. A rapid, broad range, specific and sensitive quantitative diagnostic test is the urgent need. Thus, we developed a TaqMan-Based Multiplex real-time PCR assays to identify bloodstream pathogens within a few hours. Primers and TaqMan probes were designed to be complementary to conserved regions in the 16S rDNA gene of different kinds of bacteria. To evaluate accurately, sensitively, and specifically, the known bacteria samples (Standard strains, whole blood samples) are determined by TaqMan-Based Multiplex real-time PCR. In addition, 30 blood samples taken from patients with clinical symptoms of sepsis were tested by TaqMan-Based Multiplex real-time PCR and blood culture. The mean frequency of positive for Multiplex real-time PCR was 96% at a concentration of 100 CFU/mL, and it was 100% at a concentration greater than 1000 CFU/mL. All the known blood samples and Standard strains were detected positively by TaqMan-Based Multiplex PCR, no PCR products were detected when DNAs from other bacterium were used in the multiplex assay. Among the 30 patients with clinical symptoms of sepsis, 18 patients were confirmed positive by Multiplex real-time PCR and seven patients were confirmed positive by blood culture. TaqMan-Based Multiplex real-time PCR assay with highly sensitivity, specificity and broad detection range, is a rapid and accurate method in the detection of bacterial pathogens of sepsis and should have a promising usage in the diagnosis of sepsis. © 2017 Wiley Periodicals, Inc.

  13. Time-stepping stability of continuous and discontinuous finite-element methods for 3-D wave propagation

    NARCIS (Netherlands)

    Mulder, W.A.; Zhebel, E.; Minisini, S.

    2013-01-01

    We analyse the time-stepping stability for the 3-D acoustic wave equation, discretized on tetrahedral meshes. Two types of methods are considered: mass-lumped continuous finite elements and the symmetric interior-penalty discontinuous Galerkin method. Combining the spatial discretization with the

  14. 3D elastic wave modeling using modified high‐order time stepping schemes with improved stability conditions

    KAUST Repository

    Chu, Chunlei

    2009-01-01

    We present two Lax‐Wendroff type high‐order time stepping schemes and apply them to solving the 3D elastic wave equation. The proposed schemes have the same format as the Taylor series expansion based schemes, only with modified temporal extrapolation coefficients. We demonstrate by both theoretical analysis and numerical examples that the modified schemes significantly improve the stability conditions.

  15. Real-time 3D echo in patient selection for cardiac resynchronization therapy.

    Science.gov (United States)

    Kapetanakis, Stamatis; Bhan, Amit; Murgatroyd, Francis; Kearney, Mark T; Gall, Nicholas; Zhang, Qing; Yu, Cheuk-Man; Monaghan, Mark J

    2011-01-01

    this study investigated the use of 3-dimensional (3D) echo in quantifying left ventricular mechanical dyssynchrony (LVMD), its interhospital agreement, and potential impact on patient selection. assessment of LVMD has been proposed as an improvement on conventional criteria in selecting patients for cardiac resynchronization therapy (CRT). Three-dimensional echo offers a reproducible assessment of left ventricular (LV) structure, function, and LVMD and may be useful in selecting patients for this intervention. we studied 187 patients at 2 institutions. Three-dimensional data from baseline and longest follow-up were quantified for volume, left ventricular ejection fraction (LVEF), and systolic dyssynchrony index (SDI). New York Heart Association (NYHA) functional class was assessed independently. Several outcomes from CRT were considered: 1) reduction in NYHA functional class; 2) 20% relative increase in LVEF; and 3) 15% reduction in LV end-systolic volume. Sixty-two cases were shared between institutions to analyze interhospital agreement. there was excellent interhospital agreement for 3D-derived LV end-diastolic and end- systolic volumes, EF, and SDI (variability: 2.9%, 1%, 7.1%, and 7.6%, respectively). Reduction in NYHA functional class was found in 78.9% of patients. Relative improvement in LVEF of 20% was found in 68% of patients, but significant reduction in LV end-systolic volume was found in only 41.5%. The QRS duration was not predictive of any of the measures of outcome (area under the curve [AUC]: 0.52, 0.58, and 0.57 for NYHA functional class, LVEF, and LV end-systolic volume), whereas SDI was highly predictive of improvement in these parameters (AUC: 0.79, 0.86, and 0.66, respectively). For patients not fulfilling traditional selection criteria (atrial fibrillation, QRS duration <120 ms, or undergoing device upgrade), SDI had similar predictive value. A cutoff of 10.4% for SDI was found to have the highest accuracy for predicting improvement following

  16. Proposal for element size and time increment selection guideline by 3-D finite element method for elastic waves propagation analysis

    International Nuclear Information System (INIS)

    Ishida, Hitoshi; Meshii, Toshiyuki

    2008-01-01

    This paper proposes a guideline for selection of element size and time increment by 3-D finite element method, which is applied to elastic wave propagation analysis for a long distance of a large structure. An element size and a time increment are determined by quantitative evaluation of strain, which must be 0 on the analysis model with a uniform motion, caused by spatial and time discretization. (author)

  17. 3D real-time visualization of blood flow in cerebral aneurysms by light field particle image velocimetry

    Science.gov (United States)

    Carlsohn, Matthias F.; Kemmling, André; Petersen, Arne; Wietzke, Lennart

    2016-04-01

    Cerebral aneurysms require endovascular treatment to eliminate potentially lethal hemorrhagic rupture by hemostasis of blood flow within the aneurysm. Devices (e.g. coils and flow diverters) promote homeostasis, however, measurement of blood flow within an aneurysm or cerebral vessel before and after device placement on a microscopic level has not been possible so far. This would allow better individualized treatment planning and improve manufacture design of devices. For experimental analysis, direct measurement of real-time microscopic cerebrovascular flow in micro-structures may be an alternative to computed flow simulations. An application of microscopic aneurysm flow measurement on a regular basis to empirically assess a high number of different anatomic shapes and the corresponding effect of different devices would require a fast and reliable method at low cost with high throughout assessment. Transparent three dimensional 3D models of brain vessels and aneurysms may be used for microscopic flow measurements by particle image velocimetry (PIV), however, up to now the size of structures has set the limits for conventional 3D-imaging camera set-ups. On line flow assessment requires additional computational power to cope with the processing large amounts of data generated by sequences of multi-view stereo images, e.g. generated by a light field camera capturing the 3D information by plenoptic imaging of complex flow processes. Recently, a fast and low cost workflow for producing patient specific three dimensional models of cerebral arteries has been established by stereo-lithographic (SLA) 3D printing. These 3D arterial models are transparent an exhibit a replication precision within a submillimeter range required for accurate flow measurements under physiological conditions. We therefore test the feasibility of microscopic flow measurements by PIV analysis using a plenoptic camera system capturing light field image sequences. Averaging across a sequence of

  18. Solar Potential Analysis and Integration of the Time-Dependent Simulation Results for Semantic 3d City Models Using Dynamizers

    Science.gov (United States)

    Chaturvedi, K.; Willenborg, B.; Sindram, M.; Kolbe, T. H.

    2017-10-01

    Semantic 3D city models play an important role in solving complex real-world problems and are being adopted by many cities around the world. A wide range of application and simulation scenarios directly benefit from the adoption of international standards such as CityGML. However, most of the simulations involve properties, whose values vary with respect to time, and the current generation semantic 3D city models do not support time-dependent properties explicitly. In this paper, the details of solar potential simulations are provided operating on the CityGML standard, assessing and estimating solar energy production for the roofs and facades of the 3D building objects in different ways. Furthermore, the paper demonstrates how the time-dependent simulation results are better-represented inline within 3D city models utilizing the so-called Dynamizer concept. This concept not only allows representing the simulation results in standardized ways, but also delivers a method to enhance static city models by such dynamic property values making the city models truly dynamic. The dynamizer concept has been implemented as an Application Domain Extension of the CityGML standard within the OGC Future City Pilot Phase 1. The results are given in this paper.

  19. PHISICS/RELAP5-3D Adaptive Time-Step Method Demonstrated for the HTTR LOFC#1 Simulation

    Energy Technology Data Exchange (ETDEWEB)

    Baker, Robin Ivey [Idaho National Lab. (INL), Idaho Falls, ID (United States); Balestra, Paolo [Univ. of Rome (Italy); Strydom, Gerhard [Idaho National Lab. (INL), Idaho Falls, ID (United States)

    2017-05-01

    A collaborative effort between Japan Atomic Energy Agency (JAEA) and Idaho National Laboratory (INL) as part of the Civil Nuclear Energy Working Group is underway to model the high temperature engineering test reactor (HTTR) loss of forced cooling (LOFC) transient that was performed in December 2010. The coupled version of RELAP5-3D, a thermal fluids code, and PHISICS, a neutronics code, were used to model the transient. The focus of this report is to summarize the changes made to the PHISICS-RELAP5-3D code for implementing an adaptive time step methodology into the code for the first time, and to test it using the full HTTR PHISICS/RELAP5-3D model developed by JAEA and INL and the LOFC simulation. Various adaptive schemes are available based on flux or power convergence criteria that allow significantly larger time steps to be taken by the neutronics module. The report includes a description of the HTTR and the associated PHISICS/RELAP5-3D model test results as well as the University of Rome sub-contractor report documenting the adaptive time step theory and methodology implemented in PHISICS/RELAP5-3D. Two versions of the HTTR model were tested using 8 and 26 energy groups. It was found that most of the new adaptive methods lead to significant improvements in the LOFC simulation time required without significant accuracy penalties in the prediction of the fission power and the fuel temperature. In the best performing 8 group model scenarios, a LOFC simulation of 20 hours could be completed in real-time, or even less than real-time, compared with the previous version of the code that completed the same transient 3-8 times slower than real-time. A few of the user choice combinations between the methodologies available and the tolerance settings did however result in unacceptably high errors or insignificant gains in simulation time. The study is concluded with recommendations on which methods to use for this HTTR model. An important caveat is that these findings

  20. A Statically Scheduled Time-Division-Multiplexed Network-on-Chip for Real-Time Systems

    DEFF Research Database (Denmark)

    Schoeberl, Martin; Brandner, Florian; Sparsø, Jens

    2012-01-01

    This paper explores the design of a circuit-switched network-on-chip (NoC) based on time-division-multiplexing (TDM) for use in hard real-time systems. Previous work has primarily considered application-specific systems. The work presented here targets general-purpose hardware platforms. We...... presents an FPGA-friendly hardware design, which is simple, fast, and consumes minimal resources. Furthermore, an algorithm to find minimum-period schedules for all-to-all virtual circuits on top of typical physical NoC topologies like 2D-mesh, torus, bidirectional torus, tree, and fat-tree is presented...

  1. Toward real-time endoscopically-guided robotic navigation based on a 3D virtual surgical field model

    Science.gov (United States)

    Gong, Yuanzheng; Hu, Danying; Hannaford, Blake; Seibel, Eric J.

    2015-03-01

    The challenge is to accurately guide the surgical tool within the three-dimensional (3D) surgical field for roboticallyassisted operations such as tumor margin removal from a debulked brain tumor cavity. The proposed technique is 3D image-guided surgical navigation based on matching intraoperative video frames to a 3D virtual model of the surgical field. A small laser-scanning endoscopic camera was attached to a mock minimally-invasive surgical tool that was manipulated toward a region of interest (residual tumor) within a phantom of a debulked brain tumor. Video frames from the endoscope provided features that were matched to the 3D virtual model, which were reconstructed earlier by raster scanning over the surgical field. Camera pose (position and orientation) is recovered by implementing a constrained bundle adjustment algorithm. Navigational error during the approach to fluorescence target (residual tumor) is determined by comparing the calculated camera pose to the measured camera pose using a micro-positioning stage. From these preliminary results, computation efficiency of the algorithm in MATLAB code is near real-time (2.5 sec for each estimation of pose), which can be improved by implementation in C++. Error analysis produced 3-mm distance error and 2.5 degree of orientation error on average. The sources of these errors come from 1) inaccuracy of the 3D virtual model, generated on a calibrated RAVEN robotic platform with stereo tracking; 2) inaccuracy of endoscope intrinsic parameters, such as focal length; and 3) any endoscopic image distortion from scanning irregularities. This work demonstrates feasibility of micro-camera 3D guidance of a robotic surgical tool.

  2. Application of Real-Time 3D Navigation System in CT-Guided Percutaneous Interventional Procedures: A Feasibility Study

    Directory of Open Access Journals (Sweden)

    Priya Bhattacharji

    2017-01-01

    Full Text Available Introduction. To evaluate the accuracy of a quantitative 3D navigation system for CT-guided interventional procedures in a two-part study. Materials and Methods. Twenty-two procedures were performed in abdominal and thoracic phantoms. Accuracies of the 3D anatomy map registration and navigation were evaluated. Time used for the navigated procedures was recorded. In the IRB approved clinical evaluation, 21 patients scheduled for CT-guided thoracic and hepatic biopsy and ablations were recruited. CT-guided procedures were performed without following the 3D navigation display. Accuracy of navigation as well as workflow fitness of the system was evaluated. Results. In phantoms, the average 3D anatomy map registration error was 1.79 mm. The average navigated needle placement accuracy for one-pass and two-pass procedures, respectively, was 2.0±0.7 mm and 2.8±1.1 mm in the liver and 2.7±1.7 mm and 3.0±1.4 mm in the lung. The average accuracy of the 3D navigation system in human subjects was 4.6 mm ± 3.1 for all procedures. The system fits the existing workflow of CT-guided interventions with minimum impact. Conclusion. A 3D navigation system can be performed along the existing workflow and has the potential to navigate precision needle placement in CT-guided interventional procedures.

  3. Time-step selection considerations in the analysis of reactor transients with DIF3D-K

    International Nuclear Information System (INIS)

    Taiwo, T.A.; Khalil, H.S.; Cahalan, J.E.; Morris, E.E.

    1993-01-01

    The DIF3D-K code solves the three-dimensional, time-dependent multigroup neutron diffusion equations by using a nodal approach for spatial discretization and either the theta method or one of three space-time factorization approaches for temporal integration of the nodal equations. The three space-time factorization options (namely, improved quasistatic, adiabatic, and conventional point kinetics) were implemented because of their potential efficiency advantage for the analysis of transients in which the flux shape changes more slowly than its amplitude. In this paper, we describe the implementation of DIF3D-K as the neutronics module within the SAS-HWR accident analysis code. We also describe the neuronic-related time-step selection algorithms and their influence on the accuracy and efficiency of the various solution options

  4. Time-step selection considerations in the analysis of reactor transients with DIF3D-K

    International Nuclear Information System (INIS)

    Taiwo, T.A.; Khalil, H.S.; Cahalan, J.E.; Morris, E.E.

    1993-01-01

    The DIF3D-K code solves the three-dimensional, time-dependent multigroup neutron diffusion equations by using a nodal approach for spatial discretization and either the theta method or one of three space-time factorization approaches for temporal integration of the nodal equations. The three space-time factorization options (namely, improved quasistatic, adiabatic and conventional point kinetics) were implemented because of their potential efficiency advantage for the analysis of transients in which the flux shape changes more slowly than its amplitude. Here we describe the implementation of DIF3D-K as the neutronics module within the SAS-HWR accident analysis code. We also describe the neutronics-related time step selection algorithms and their influence on the accuracy and efficiency of the various solution options

  5. Modelling of Data Stream Time Characteristics for Use of Inverse Multiplexer

    Directory of Open Access Journals (Sweden)

    Petr Jares

    2014-01-01

    Full Text Available Today, increasing of the transmission rate in a telecommunications network is possible in various ways. One of them is inverse multiplexing. The inverse multiplexer divides a data stream to multiple parallel channels. This principle not only allows to increase the total available transmission rate, but also allows to reduce the error rate and interruption in data stream. The digital subscriber line may be used for the implementation of the inverse multiplex. Accurate knowledge of the transmission parameters of a digital subscriber line and the entire infrastructure of the network provider is necessary for the effective functioning of the terminal device with inverse multiplexing. It is necessary to know not only the parameters related to the transmission rate, but above all the parameters relevant to the time characteristics of data transmission. This paper describes how to obtain the transmission parameters of real digital subscriber lines and their modelling.

  6. Real-time 3D motion tracking for small animal brain PET

    Science.gov (United States)

    Kyme, A. Z.; Zhou, V. W.; Meikle, S. R.; Fulton, R. R.

    2008-05-01

    High-resolution positron emission tomography (PET) imaging of conscious, unrestrained laboratory animals presents many challenges. Some form of motion correction will normally be necessary to avoid motion artefacts in the reconstruction. The aim of the current work was to develop and evaluate a motion tracking system potentially suitable for use in small animal PET. This system is based on the commercially available stereo-optical MicronTracker S60 which we have integrated with a Siemens Focus-220 microPET scanner. We present measured performance limits of the tracker and the technical details of our implementation, including calibration and synchronization of the system. A phantom study demonstrating motion tracking and correction was also performed. The system can be calibrated with sub-millimetre accuracy, and small lightweight markers can be constructed to provide accurate 3D motion data. A marked reduction in motion artefacts was demonstrated in the phantom study. The techniques and results described here represent a step towards a practical method for rigid-body motion correction in small animal PET. There is scope to achieve further improvements in the accuracy of synchronization and pose measurements in future work.

  7. Preclinical, fluorescence and diffuse optical tomography: non-contact instrumentation, modeling and time-resolved 3D reconstruction

    International Nuclear Information System (INIS)

    Nouizi, F.

    2011-09-01

    Time-Resolved Diffuse Optical Tomography (TR-DOT) is a new non-invasive imaging technique increasingly used in the clinical and preclinical fields. It yields optical absorption and scattering maps of the explored organs, and related physiological parameters. Time-Resolved Fluorescence Diffuse Optical Tomography (TR-FDOT) is based on the detection of fluorescence photons. It provides spatio-temporal maps of fluorescent probe concentrations and life times, and allows access to metabolic and molecular imaging which is important for diagnosis and therapeutic monitoring, particularly in oncology. The main goal of this thesis was to reconstruct 3D TR-DOT/TR-FDOT images of small animals using time-resolved optical technology. Data were acquired using optical fibers fixed around the animal without contact with its surface. The work was achieved in four steps: 1)- Setting up an imaging device to record the 3D coordinates of an animal's surface; 2)- Modeling the no-contact approach to solve the forward problem; 3)- Processing of the measured signals taking into account the impulse response of the device; 4)- Implementation of a new image reconstruction method based on a selection of carefully chosen points. As a result, good-quality 3D optical images were obtained owing to reduced cross-talk between absorption and scattering. Moreover, the computation time was cut down, compared to full-time methods using whole temporal profiles. (author)

  8. Externally calibrated parallel imaging for 3D multispectral imaging near metallic implants using broadband ultrashort echo time imaging.

    Science.gov (United States)

    Wiens, Curtis N; Artz, Nathan S; Jang, Hyungseok; McMillan, Alan B; Reeder, Scott B

    2017-06-01

    To develop an externally calibrated parallel imaging technique for three-dimensional multispectral imaging (3D-MSI) in the presence of metallic implants. A fast, ultrashort echo time (UTE) calibration acquisition is proposed to enable externally calibrated parallel imaging techniques near metallic implants. The proposed calibration acquisition uses a broadband radiofrequency (RF) pulse to excite the off-resonance induced by the metallic implant, fully phase-encoded imaging to prevent in-plane distortions, and UTE to capture rapidly decaying signal. The performance of the externally calibrated parallel imaging reconstructions was assessed using phantoms and in vivo examples. Phantom and in vivo comparisons to self-calibrated parallel imaging acquisitions show that significant reductions in acquisition times can be achieved using externally calibrated parallel imaging with comparable image quality. Acquisition time reductions are particularly large for fully phase-encoded methods such as spectrally resolved fully phase-encoded three-dimensional (3D) fast spin-echo (SR-FPE), in which scan time reductions of up to 8 min were obtained. A fully phase-encoded acquisition with broadband excitation and UTE enabled externally calibrated parallel imaging for 3D-MSI, eliminating the need for repeated calibration regions at each frequency offset. Significant reductions in acquisition time can be achieved, particularly for fully phase-encoded methods like SR-FPE. Magn Reson Med 77:2303-2309, 2017. © 2016 International Society for Magnetic Resonance in Medicine. © 2016 International Society for Magnetic Resonance in Medicine.

  9. Full Parallax Integral 3D Display and Image Processing Techniques

    Directory of Open Access Journals (Sweden)

    Byung-Gook Lee

    2015-02-01

    Full Text Available Purpose – Full parallax integral 3D display is one of the promising future displays that provide different perspectives according to viewing direction. In this paper, the authors review the recent integral 3D display and image processing techniques for improving the performance, such as viewing resolution, viewing angle, etc.Design/methodology/approach – Firstly, to improve the viewing resolution of 3D images in the integral imaging display with lenslet array, the authors present 3D integral imaging display with focused mode using the time-multiplexed display. Compared with the original integral imaging with focused mode, the authors use the electrical masks and the corresponding elemental image set. In this system, the authors can generate the resolution-improved 3D images with the n×n pixels from each lenslet by using n×n time-multiplexed display. Secondly, a new image processing technique related to the elemental image generation for 3D scenes is presented. With the information provided by the Kinect device, the array of elemental images for an integral imaging display is generated.Findings – From their first work, the authors improved the resolution of 3D images by using the time-multiplexing technique through the demonstration of the 24 inch integral imaging system. Authors’ method can be applied to a practical application. Next, the proposed method with the Kinect device can gain a competitive advantage over other methods for the capture of integral images of big 3D scenes. The main advantage of fusing the Kinect and the integral imaging concepts is the acquisition speed, and the small amount of handled data.Originality / Value – In this paper, the authors review their recent methods related to integral 3D display and image processing technique.Research type – general review.

  10. Cardiac C-arm computed tomography using a 3D + time ROI reconstruction method with spatial and temporal regularization

    Energy Technology Data Exchange (ETDEWEB)

    Mory, Cyril, E-mail: cyril.mory@philips.com [Université de Lyon, CREATIS, CNRS UMR5220, Inserm U1044, INSA-Lyon, Université Lyon 1, F-69621 Villeurbanne Cedex (France); Philips Research Medisys, 33 rue de Verdun, 92156 Suresnes (France); Auvray, Vincent; Zhang, Bo [Philips Research Medisys, 33 rue de Verdun, 92156 Suresnes (France); Grass, Michael; Schäfer, Dirk [Philips Research, Röntgenstrasse 24–26, D-22335 Hamburg (Germany); Chen, S. James; Carroll, John D. [Department of Medicine, Division of Cardiology, University of Colorado Denver, 12605 East 16th Avenue, Aurora, Colorado 80045 (United States); Rit, Simon [Université de Lyon, CREATIS, CNRS UMR5220, Inserm U1044, INSA-Lyon, Université Lyon 1 (France); Centre Léon Bérard, 28 rue Laënnec, F-69373 Lyon (France); Peyrin, Françoise [Université de Lyon, CREATIS, CNRS UMR5220, Inserm U1044, INSA-Lyon, Université Lyon 1, F-69621 Villeurbanne Cedex (France); X-ray Imaging Group, European Synchrotron, Radiation Facility, BP 220, F-38043 Grenoble Cedex (France); Douek, Philippe; Boussel, Loïc [Université de Lyon, CREATIS, CNRS UMR5220, Inserm U1044, INSA-Lyon, Université Lyon 1 (France); Hospices Civils de Lyon, 28 Avenue du Doyen Jean Lépine, 69500 Bron (France)

    2014-02-15

    Purpose: Reconstruction of the beating heart in 3D + time in the catheter laboratory using only the available C-arm system would improve diagnosis, guidance, device sizing, and outcome control for intracardiac interventions, e.g., electrophysiology, valvular disease treatment, structural or congenital heart disease. To obtain such a reconstruction, the patient's electrocardiogram (ECG) must be recorded during the acquisition and used in the reconstruction. In this paper, the authors present a 4D reconstruction method aiming to reconstruct the heart from a single sweep 10 s acquisition. Methods: The authors introduce the 4D RecOnstructiOn using Spatial and TEmporal Regularization (short 4D ROOSTER) method, which reconstructs all cardiac phases at once, as a 3D + time volume. The algorithm alternates between a reconstruction step based on conjugate gradient and four regularization steps: enforcing positivity, averaging along time outside a motion mask that contains the heart and vessels, 3D spatial total variation minimization, and 1D temporal total variation minimization. Results: 4D ROOSTER recovers the different temporal representations of a moving Shepp and Logan phantom, and outperforms both ECG-gated simultaneous algebraic reconstruction technique and prior image constrained compressed sensing on a clinical case. It generates 3D + time reconstructions with sharp edges which can be used, for example, to estimate the patient's left ventricular ejection fraction. Conclusions: 4D ROOSTER can be applied for human cardiac C-arm CT, and potentially in other dynamic tomography areas. It can easily be adapted to other problems as regularization is decoupled from projection and back projection.

  11. Ice crystallization in porous building materials: assessing damage using real-time 3D monitoring

    Science.gov (United States)

    Deprez, Maxim; De Kock, Tim; De Schutter, Geert; Cnudde, Veerle

    2017-04-01

    Frost action is one of the main causes of deterioration of porous building materials in regions at middle to high latitudes. Damage will occur when the internal stresses due to ice formation become larger than the strength of the material. Hence, the sensitivity of the material to frost damage is partly defined by the structure of the solid body. On the other hand, the size, shape and interconnection of pores manages the water distribution in the building material and, therefore, the characteristics of the pore space control potential to form ice crystals (Ruedrich et al., 2011). In order to assess the damage to building materials by ice crystallization, lot of effort was put into identifying the mechanisms behind the stress build up. First of all, volumetric expansion of 9% (Hirschwald, 1908) during the transition of water to ice should be mentioned. Under natural circumstances, however, water saturation degrees within natural rocks or concrete cannot reach a damaging value. Therefore, linear growth pressure (Scherer, 1999), as well as several mechanisms triggered by water redistribution during freezing (Powers and Helmuth, 1953; Everett, 1961) are more likely responsible for damage due to freezing. Nevertheless, these theories are based on indirect observations and models and, thus, direct evidence that reveals the exact damage mechanism under certain conditions is still lacking. To obtain this proof, in-situ information needs to be acquired while a freezing process is performed. X-ray computed tomography has proven to be of great value in material research. Recent advances at the Ghent University Centre for Tomography (UGCT) have already allowed to dynamically 3D image crack growth in natural rock during freeze-thaw cycles (De Kock et al., 2015). A great potential to evaluate the different stress build-up mechanisms can be found in this imaging technique consequently. It is required to cover a range of materials with different petrophysical properties to achieve

  12. Fast, free-breathing, in vivo fetal imaging using time-resolved 3D MRI technique: preliminary results.

    Science.gov (United States)

    Liu, Jing; Glenn, Orit A; Xu, Duan

    2014-04-01

    Fetal MR imaging is very challenging due to the movement of fetus and the breathing motion of the mother. Current clinical protocols involve quick 2D scouting scans to determine scan plane and often several attempts to reorient the scan plane when the fetus moves. This makes acquisition of fetal MR images clinically challenging and results in long scan times in order to obtain images that are of diagnostic quality. Compared to 2D imaging, 3D imaging of the fetus has many advantages such as higher SNR and ability to reformat images in multiple planes. However, it is more sensitive to motion and challenging for fetal imaging due to irregular fetal motion in addition to maternal breathing and cardiac motion. This aim of this study is to develop a fast 3D fetal imaging technique to resolve the challenge of imaging the moving fetus. This 3D imaging sequence has multi-echo radial sampling in-plane and conventional Cartesian encoding through plane, which provides motion robustness and high data acquisition efficiency. The utilization of a golden-ratio based projection profile allows flexible time-resolved image reconstruction with arbitrary temporal resolution at arbitrary time points as well as high signal-to-noise and contrast-to-noise ratio. The nice features of the developed image technique allow the 3D visualization of the movements occurring throughout the scan. In this study, we applied this technique to three human subjects for fetal MRI and achieved promising preliminary results of fetal brain, heart and lung imaging.

  13. Argo: A Time-Elastic Time-Division-Multiplexed NOC using Asynchronous Routers

    DEFF Research Database (Denmark)

    Kasapaki, Evangelia; Sparsø, Jens

    2014-01-01

    are either synchronous or mesochronous. We use asynchronous routers to achieve a simpler, smaller, and more robust, self-timed design. Our design exploits the fact that pipelined asynchronous circuits also behave as ripple FIFOs. Thus, it avoids the need for explicit synchronization FIFOs between the routers......In this paper we explore the use of asynchronous routers in a time-division-multiplexed (TDM) network-on-chip (NOC), Argo, that is being developed for a multi-processor platform for hard real-time systems. TDM inherently requires a common time reference, and existing TDM-based NOC designs...... delays derived from a 65nm CMOS implementation, a worstcase analysis shows that a typical design can tolerate a skew of 1-5 cycles (depending on FIFO depths and NI clock frequency). Simulation results of a 2 x 2 NOC confirm this....

  14. WE-AB-BRB-00: Session in Memory of Robert J. Shalek: High Resolution Dosimetry from 2D to 3D to Real-Time 3D

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2016-06-15

    Despite widespread IMRT treatments at modern radiation therapy clinics, precise dosimetric commissioning of an IMRT system remains a challenge. In the most recent report from the Radiological Physics Center (RPC), nearly 20% of institutions failed an end-to-end test with an anthropomorphic head and neck phantom, a test that has rather lenient dose difference and distance-to-agreement criteria of 7% and 4 mm. The RPC report provides strong evidence that IMRT implementation is prone to error and that improved quality assurance tools are required. At the heart of radiation therapy dosimetry is the multidimensional dosimeter. However, due to the limited availability of water-equivalent dosimetry materials, research and development in this important field is challenging. In this session, we will review a few dosimeter developments that are either in the laboratory phase or in the pre-commercialization phase. 1) Radiochromic plastic. Novel formulations exhibit light absorbing optical contrast with very little scatter, enabling faster, broad beam optical CT design. 2) Storage phosphor. After irradiation, the dosimetry panels will be read out using a dedicated 2D scanning apparatus in a non-invasive, electro-optic manner and immediately restored for further use. 3) Liquid scintillator. Scintillators convert the energy from x-rays and proton beams into visible light, which can be recorded with a scientific camera (CCD or CMOS) from multiple angles. The 3D shape of the dose distribution can then be reconstructed. 4) Cherenkov emission imaging. Gated intensified imaging allows video-rate passive detection of Cherenkov emission during radiation therapy with the room lights on. Learning Objectives: To understand the physics of a variety of dosimetry techniques based upon optical imaging To investigate the strategies to overcome respective challenges and limitations To explore novel ideas of dosimeter design Supported in part by NIH Grants R01CA148853, R01CA182450, R01CA109558

  15. WE-AB-BRB-00: Session in Memory of Robert J. Shalek: High Resolution Dosimetry from 2D to 3D to Real-Time 3D

    International Nuclear Information System (INIS)

    2016-01-01

    Despite widespread IMRT treatments at modern radiation therapy clinics, precise dosimetric commissioning of an IMRT system remains a challenge. In the most recent report from the Radiological Physics Center (RPC), nearly 20% of institutions failed an end-to-end test with an anthropomorphic head and neck phantom, a test that has rather lenient dose difference and distance-to-agreement criteria of 7% and 4 mm. The RPC report provides strong evidence that IMRT implementation is prone to error and that improved quality assurance tools are required. At the heart of radiation therapy dosimetry is the multidimensional dosimeter. However, due to the limited availability of water-equivalent dosimetry materials, research and development in this important field is challenging. In this session, we will review a few dosimeter developments that are either in the laboratory phase or in the pre-commercialization phase. 1) Radiochromic plastic. Novel formulations exhibit light absorbing optical contrast with very little scatter, enabling faster, broad beam optical CT design. 2) Storage phosphor. After irradiation, the dosimetry panels will be read out using a dedicated 2D scanning apparatus in a non-invasive, electro-optic manner and immediately restored for further use. 3) Liquid scintillator. Scintillators convert the energy from x-rays and proton beams into visible light, which can be recorded with a scientific camera (CCD or CMOS) from multiple angles. The 3D shape of the dose distribution can then be reconstructed. 4) Cherenkov emission imaging. Gated intensified imaging allows video-rate passive detection of Cherenkov emission during radiation therapy with the room lights on. Learning Objectives: To understand the physics of a variety of dosimetry techniques based upon optical imaging To investigate the strategies to overcome respective challenges and limitations To explore novel ideas of dosimeter design Supported in part by NIH Grants R01CA148853, R01CA182450, R01CA109558

  16. 3D seismic modeling and reverse‐time migration with the parallel Fourier method using non‐blocking collective communications

    KAUST Repository

    Chu, Chunlei

    2009-01-01

    The major performance bottleneck of the parallel Fourier method on distributed memory systems is the network communication cost. In this study, we investigate the potential of using non‐blocking all‐to‐all communications to solve this problem by overlapping computation and communication. We present the runtime comparison of a 3D seismic modeling problem with the Fourier method using non‐blocking and blocking calls, respectively, on a Linux cluster. The data demonstrate that a performance improvement of up to 40% can be achieved by simply changing blocking all‐to‐all communication calls to non‐blocking ones to introduce the overlapping capability. A 3D reverse‐time migration result is also presented as an extension to the modeling work based on non‐blocking collective communications.

  17. Acute subarachnoid haemorrhage: 3D time-of-flight MR angiography versus intra-arterial digital angiography

    Energy Technology Data Exchange (ETDEWEB)

    Anzalone, N. [Dept. of Neuroradiology, Scientific Inst. H. S. Raffaele, Milan (Italy); Triulzi, F. [Dept. of Neuroradiology, Scientific Inst. H. S. Raffaele, Milan (Italy); Scotti, G. [Dept. of Neuroradiology, Scientific Inst. H. S. Raffaele, Milan (Italy)

    1995-05-01

    To evaluate the efficacy and reliability of 3D time-of-flight MR angiography (TOF MRA) as a noninvasive procedure, 27 patients with acute subarachnoid haemorrhage (SAH) were studied with MRA immediately before or after intra-arterial digital subtraction angiography (DSA). 3DTOF MRA was performed with an axial slab of 60 mm centred on the circle of Willis and isotropic voxels. DSA showed 22 aneurysms and 1 dural arteriovenous fistula in 21 patients; the aneurysms ranged in size from 2 to 8 mm. MRA failed to show 2 small aneurysms, at the origin of the posterior and anterior communicating arteries. The 3D display of the intracranial vessels obtained with maximum intensity projection (MIP) or targetted MIP sometimes rendered the aneurysms better than DSA. However, due to its high spatial resolution, DSA more clearly defined the overall anatomy of the walls of the normal and abnormal vessels. (orig.)

  18. Development of real-time motion capture system for 3D on-line games linked with virtual character

    Science.gov (United States)

    Kim, Jong Hyeong; Ryu, Young Kee; Cho, Hyung Suck

    2004-10-01

    Motion tracking method is being issued as essential part of the entertainment, medical, sports, education and industry with the development of 3-D virtual reality. Virtual human character in the digital animation and game application has been controlled by interfacing devices; mouse, joysticks, midi-slider, and so on. Those devices could not enable virtual human character to move smoothly and naturally. Furthermore, high-end human motion capture systems in commercial market are expensive and complicated. In this paper, we proposed a practical and fast motion capturing system consisting of optic sensors, and linked the data with 3-D game character with real time. The prototype experiment setup is successfully applied to a boxing game which requires very fast movement of human character.

  19. Toroidal Ampere-Faraday Equations Solved Consistently with the CQL3D Fokker-Planck Time-Evolution

    Science.gov (United States)

    Harvey, R. W.; Petrov, Yu. V.

    2013-10-01

    A self-consistent, time-dependent toroidal electric field calculation is a key feature of a complete 3D Fokker-Planck kinetic distribution radial transport code for f(v,theta,rho,t). In the present CQL3D finite-difference model, the electric field E(rho,t) is either prescribed, or iteratively adjusted to obtain prescribed toroidal or parallel currents. We discuss first results of an implementation of the Ampere-Faraday equation for the self-consistent toroidal electric field, as applied to the runaway electron production in tokamaks due to rapid reduction of the plasma temperature as occurs in a plasma disruption. Our previous results assuming a constant current density (Lenz' Law) model showed that prompt ``hot-tail runaways'' dominated ``knock-on'' and Dreicer ``drizzle'' runaways; we will examine modifications due to the more complete Ampere-Faraday solution. Work supported by US DOE under DE-FG02-ER54744.

  20. 3D-SURFER 2.0: web platform for real-time search and characterization of protein surfaces.

    Science.gov (United States)

    Xiong, Yi; Esquivel-Rodriguez, Juan; Sael, Lee; Kihara, Daisuke

    2014-01-01

    The increasing number of uncharacterized protein structures necessitates the development of computational approaches for function annotation using the protein tertiary structures. Protein structure database search is the basis of any structure-based functional elucidation of proteins. 3D-SURFER is a web platform for real-time protein surface comparison of a given protein structure against the entire PDB using 3D Zernike descriptors. It can smoothly navigate the protein structure space in real-time from one query structure to another. A major new feature of Release 2.0 is the ability to compare the protein surface of a single chain, a single domain, or a single complex against databases of protein chains, domains, complexes, or a combination of all three in the latest PDB. Additionally, two types of protein structures can now be compared: all-atom-surface and backbone-atom-surface. The server can also accept a batch job for a large number of database searches. Pockets in protein surfaces can be identified by VisGrid and LIGSITE (csc) . The server is available at http://kiharalab.org/3d-surfer/.

  1. Sodium ((23)Na) ultra-short echo time imaging in the human brain using a 3D-Cones trajectory.

    Science.gov (United States)

    Riemer, Frank; Solanky, Bhavana S; Stehning, Christian; Clemence, Matthew; Wheeler-Kingshott, Claudia A M; Golay, Xavier

    2014-02-01

    Sodium magnetic resonance imaging ((23)Na-MRI) of the brain has shown changes in (23)Na signal as a hallmark of various neurological diseases such as stroke, Alzheimer's disease, Multiple Sclerosis and Huntington's disease. To improve scan times and image quality, we have implemented the 3D-Cones (CN) sequence for in vivo (23)Na brain MRI. Using signal-to-noise (SNR) as a measurement of sequence performance, CN is compared against more established 3D-radial k-space sampling schemes featuring cylindrical stack-of-stars (SOS) and 3D-spokes kooshball (KB) trajectories, on five healthy volunteers in a clinical setting. Resolution was evaluated by simulating the point-spread-functions (PSFs) and experimental measures on a phantom. All sequences were shown to have a similar SNR arbitrary units (AU) of 6-6.5 in brain white matter, 7-9 in gray matter and 17-18 AU in cerebrospinal fluid. SNR between white and gray matter were significantly different for KB and CN (p = 0.046 and time with no significant trade-off in SNR is achieved. CN is therefore more suitable for (23)Na-MRI in the brain.

  2. Second-order spherical optoelectronic detector for 3D multi-particles wave emission and propagation in space time domains

    Science.gov (United States)

    Romano, Francesco; Cimmino, Rosario F.

    2017-09-01

    This paper concerns a feasibility study on a 2nd order spherical, or three-dimensional, angular momentum and linear momentum detector for photonic radiation applications. It has been developed in order to obtain a paraxial approximation of physical events observed under Coulomb gauge condition, which is essential to compute both the longitudinal and transverse rotational components of the observed 3-D vortex field, generally neglected by conventional detection systems under current usage. Since light and laser beams are neither full transversal or rotational phenomena, to measure directly and in the same time both the energy, mainly not-rotational, related to the relevant part of the linear momentum and the potential solenoidal energy (vortex), related to the angular momentum, 2nd order spherical, or 3-D, detector techniques are required. In addition, direct 2nd order measure techniques enable development of TEM + DEM [17] studies, therefore allowing for monochromatic complex wave detection with a paraxial accuracy in the relativistic time-space domain. Light and optic or Electromagnetic 2nd order 3-D AnM energy may usefully be used in tre-dimensional optical TEM, noTEM, DEM vortex or laser communications The paper illustrates an innovative quadratic order 3-D spherical model detector applied to directly measure a light source power spectrum and compares the performances of this innovative technique with those obtained with a traditional 1st order system. Results from a number of test experiments conducted in cooperation with INAF Observatories of ArcetriFlorence and Medicina-Bologna (Italy), and focused on telescopic observations of the inter-stellar electromagnetic radiations, are also summarized. The innovative quadratic-order spherical detector turns out to be optimal for optical and/or radio telescopes application, optical and optoelectronic sensors development and gravitational wave 2nd order detectors implementation. Although the proposed method is very

  3. Reconstruction for time-domain in vivo EPR 3D multigradient oximetric imaging--a parallel processing perspective.

    Science.gov (United States)

    Dharmaraj, Christopher D; Thadikonda, Kishan; Fletcher, Anthony R; Doan, Phuc N; Devasahayam, Nallathamby; Matsumoto, Shingo; Johnson, Calvin A; Cook, John A; Mitchell, James B; Subramanian, Sankaran; Krishna, Murali C

    2009-01-01

    Three-dimensional Oximetric Electron Paramagnetic Resonance Imaging using the Single Point Imaging modality generates unpaired spin density and oxygen images that can readily distinguish between normal and tumor tissues in small animals. It is also possible with fast imaging to track the changes in tissue oxygenation in response to the oxygen content in the breathing air. However, this involves dealing with gigabytes of data for each 3D oximetric imaging experiment involving digital band pass filtering and background noise subtraction, followed by 3D Fourier reconstruction. This process is rather slow in a conventional uniprocessor system. This paper presents a parallelization framework using OpenMP runtime support and parallel MATLAB to execute such computationally intensive programs. The Intel compiler is used to develop a parallel C++ code based on OpenMP. The code is executed on four Dual-Core AMD Opteron shared memory processors, to reduce the computational burden of the filtration task significantly. The results show that the parallel code for filtration has achieved a speed up factor of 46.66 as against the equivalent serial MATLAB code. In addition, a parallel MATLAB code has been developed to perform 3D Fourier reconstruction. Speedup factors of 4.57 and 4.25 have been achieved during the reconstruction process and oximetry computation, for a data set with 23 x 23 x 23 gradient steps. The execution time has been computed for both the serial and parallel implementations using different dimensions of the data and presented for comparison. The reported system has been designed to be easily accessible even from low-cost personal computers through local internet (NIHnet). The experimental results demonstrate that the parallel computing provides a source of high computational power to obtain biophysical parameters from 3D EPR oximetric imaging, almost in real-time.

  4. Reconstruction for Time-Domain In Vivo EPR 3D Multigradient Oximetric Imaging—A Parallel Processing Perspective

    Directory of Open Access Journals (Sweden)

    Christopher D. Dharmaraj

    2009-01-01

    Full Text Available Three-dimensional Oximetric Electron Paramagnetic Resonance Imaging using the Single Point Imaging modality generates unpaired spin density and oxygen images that can readily distinguish between normal and tumor tissues in small animals. It is also possible with fast imaging to track the changes in tissue oxygenation in response to the oxygen content in the breathing air. However, this involves dealing with gigabytes of data for each 3D oximetric imaging experiment involving digital band pass filtering and background noise subtraction, followed by 3D Fourier reconstruction. This process is rather slow in a conventional uniprocessor system. This paper presents a parallelization framework using OpenMP runtime support and parallel MATLAB to execute such computationally intensive programs. The Intel compiler is used to develop a parallel C++ code based on OpenMP. The code is executed on four Dual-Core AMD Opteron shared memory processors, to reduce the computational burden of the filtration task significantly. The results show that the parallel code for filtration has achieved a speed up factor of 46.66 as against the equivalent serial MATLAB code. In addition, a parallel MATLAB code has been developed to perform 3D Fourier reconstruction. Speedup factors of 4.57 and 4.25 have been achieved during the reconstruction process and oximetry computation, for a data set with 23×23×23 gradient steps. The execution time has been computed for both the serial and parallel implementations using different dimensions of the data and presented for comparison. The reported system has been designed to be easily accessible even from low-cost personal computers through local internet (NIHnet. The experimental results demonstrate that the parallel computing provides a source of high computational power to obtain biophysical parameters from 3D EPR oximetric imaging, almost in real-time.

  5. Real-time geometric scene estimation for RGBD images using a 3D box shape grammar

    Science.gov (United States)

    Willis, Andrew R.; Brink, Kevin M.

    2016-06-01

    This article describes a novel real-time algorithm for the purpose of extracting box-like structures from RGBD image data. In contrast to conventional approaches, the proposed algorithm includes two novel attributes: (1) it divides the geometric estimation procedure into subroutines having atomic incremental computational costs, and (2) it uses a generative "Block World" perceptual model that infers both concave and convex box elements from detection of primitive box substructures. The end result is an efficient geometry processing engine suitable for use in real-time embedded systems such as those on an UAVs where it is intended to be an integral component for robotic navigation and mapping applications.

  6. Principles of 5D modeling, full integration of 3D space, time and scale

    NARCIS (Netherlands)

    Van Oosterom, P.; Stoter, J.

    2012-01-01

    This paper proposes an approach for data modelling in five dimensions. Apart from three dimensions for geometrical representation and a fourth dimension for time, we identify scale as fifth dimensional characteristic. Considering scale as an extra dimension of geographic information, fully

  7. A Smartphone Interface for a Wireless EEG Headset with Real-Time 3D Reconstruction

    DEFF Research Database (Denmark)

    Stopczynski, Arkadiusz; Larsen, Jakob Eg; Stahlhut, Carsten

    2011-01-01

    We demonstrate a fully functional handheld brain scanner consisting of a low-cost 14-channel EEG headset with a wireless connec- tion to a smartphone, enabling minimally invasive EEG monitoring in naturalistic settings. The smartphone provides a touch-based interface with real-time brain state...

  8. 3D time-dependent flow computations using a molecular stress function model with constraint release

    DEFF Research Database (Denmark)

    Rasmussen, Henrik Koblitz

    2002-01-01

    The numerical simulation of time dependent viscoelastic flow (in three dimensions) is of interest in connection with a variety of polymer processing operations. The application of the numerical simulation techniques is in the analysis and design of polymer processing problems. This is operations,...

  9. Design of a 3D virtual geographic interface for access to geoinformatin in real time

    DEFF Research Database (Denmark)

    Bodum, Lars

    2004-01-01

    region struck this part of Denmark at it has struck many other places in Europe and around the world. At about the same time the first ideas about a virtual geographic interface was initiated and launched as one of the projects at the newly build Virtual Reality Centre of Aalborg University. Later named...

  10. Accurate characterization of 3D diffraction gratings using time domain discontinuous Galerkin method with exact absorbing boundary conditions

    KAUST Repository

    Sirenko, Kostyantyn

    2013-07-01

    Exact absorbing and periodic boundary conditions allow to truncate grating problems\\' infinite physical domains without introducing any errors. This work presents exact absorbing boundary conditions for 3D diffraction gratings and describes their discretization within a high-order time-domain discontinuous Galerkin finite element method (TD-DG-FEM). The error introduced by the boundary condition discretization matches that of the TD-DG-FEM; this results in an optimal solver in terms of accuracy and computation time. Numerical results demonstrate the superiority of this solver over TD-DG-FEM with perfectly matched layers (PML)-based domain truncation. © 2013 IEEE.

  11. 3-D time-lapse electrical resistivity monitoring of injected CO2 in a shallow aquifer

    DEFF Research Database (Denmark)

    Doetsch, Joseph A. J.A.; Auken, Esben; Christiansen, Anders Vest C A.V.C.

    2013-01-01

    Contamination of potable groundwater by leaking CO2 is a potential risk of carbon sequestration. With the help of a field experiment, we investigate if surface electrical resistivity tomography (ERT) can detect dissolved CO2 in a shallow aquifer. For this purpose, we injected CO2 at a depth of 5...... inversion reveals the geology at the site consisting of aeolian sands near the surface and glacial sands below 5 m depth. Time-lapse inversions clearly image the dissolved CO2 plume with decreased electrical resistivity values. We can follow the CO2 plume as it spreads and moves with the groundwater...... and 10 m and monitored its migration using 320 surface electrodes on a 126 m × 20 m grid. A fully automated acquisition system continuously collected data and uploaded it into an online database. The large amount of data allows for time-series analysis for data quality and noise estimation. A baseline...

  12. JHelioviewer. Time-dependent 3D visualisation of solar and heliospheric data

    Science.gov (United States)

    Müller, D.; Nicula, B.; Felix, S.; Verstringe, F.; Bourgoignie, B.; Csillaghy, A.; Berghmans, D.; Jiggens, P.; García-Ortiz, J. P.; Ireland, J.; Zahniy, S.; Fleck, B.

    2017-09-01

    Context. Solar observatories are providing the world-wide community with a wealth of data, covering wide time ranges (e.g. Solar and Heliospheric Observatory, SOHO), multiple viewpoints (Solar TErrestrial RElations Observatory, STEREO), and returning large amounts of data (Solar Dynamics Observatory, SDO). In particular, the large volume of SDO data presents challenges; the data are available only from a few repositories, and full-disk, full-cadence data for reasonable durations of scientific interest are difficult to download, due to their size and the download rates available to most users. From a scientist's perspective this poses three problems: accessing, browsing, and finding interesting data as efficiently as possible. Aims: To address these challenges, we have developed JHelioviewer, a visualisation tool for solar data based on the JPEG 2000 compression standard and part of the open source ESA/NASA Helioviewer Project. Since the first release of JHelioviewer in 2009, the scientific functionality of the software has been extended significantly, and the objective of this paper is to highlight these improvements. Methods: The JPEG 2000 standard offers useful new features that facilitate the dissemination and analysis of high-resolution image data and offers a solution to the challenge of efficiently browsing petabyte-scale image archives. The JHelioviewer software is open source, platform independent, and extendable via a plug-in architecture. Results: With JHelioviewer, users can visualise the Sun for any time period between September 1991 and today; they can perform basic image processing in real time, track features on the Sun, and interactively overlay magnetic field extrapolations. The software integrates solar event data and a timeline display. Once an interesting event has been identified, science quality data can be accessed for in-depth analysis. As a first step towards supporting science planning of the upcoming Solar Orbiter mission, JHelioviewer

  13. Time-of-flight 3D Neutron Diffraction for Multigrain Crystallography

    OpenAIRE

    Cereser, Alberto; Hall, Stephen A.; Steuwer, Axel; Strobl, Markus; Schmidt, Søren

    2016-01-01

    This thesis presents a new technique for measuring spatially resolved microstructures in crystalline materials using pulsed neutron beams. The method, called Time-of-Flight Three Dimensional Neutron Diffraction (ToF 3DND), identifies the position, shape and crystallographic orientation of the individual grains within the sample. The experiments were conducted at the single crystal diffractometer SENJU at the Japanese neutron source J-PARC. The choice of this instrument was motivated by its la...

  14. Time-of-flight 3D Neutron Diffraction for Multigrain Crystallography

    DEFF Research Database (Denmark)

    Cereser, Alberto

    This thesis presents a new technique for measuring spatially resolved microstructures in crystalline materials using pulsed neutron beams. The method, called Time-of-Flight Three Dimensional Neutron Diffraction (ToF 3DND), identifies the position, shape and crystallographic orientation of the ind......This thesis presents a new technique for measuring spatially resolved microstructures in crystalline materials using pulsed neutron beams. The method, called Time-of-Flight Three Dimensional Neutron Diffraction (ToF 3DND), identifies the position, shape and crystallographic orientation...... measurements: a time resolved imaging detector, developed at University of Berkeley, California, was fitted in the interior of SENJU in order to record the extinction spots in the transmitted beam (i.e. areas with missing intensity due to Bragg diffraction of the individual grains). The arrangement of the two...... steps have been developed in this study. The work also shows that based on the transmission data alone the orientations are not uniquely determined; however, it is possible to find an unique solution by including diffraction signals from the imaging detector. The second version uses an existing method...

  15. 3D pre-stack time migration; Kiruhihoffuho ni yoru sanjigen jugo mae jikan migration shori

    Energy Technology Data Exchange (ETDEWEB)

    Nakajima, Y.; Matsuoka, T. [Japan Petroleum Exploration Corp., Tokyo (Japan); Tsuru, T. [Japan National Oil Corp., Tokyo (Japan)

    1997-05-27

    This paper reports pre-stack migration in elastic wave exploration as to its algorithm and examples of processed data. The time migration processing hypothesizes that seismic waves propagate linearly. It calculates travel time by dividing the sum of the straight distance from a vibration transmitting point to an image point and the straight distance from the image point to a vibration receiving point with RMS velocity given as a parameter. To maintain the relative relation of amplitude sizes, the signal on an elliptic body is made smaller in inverse proportion to the size of that elliptic body. With regard to apparent interval of input trace as seen from the reflection surface, or with regard to density, the signal is made smaller by cos{theta} times. While this program deals with three-dimensional migration, its output turns out as an arbitrary two-dimensional plane. The program requires a huge amount of data processing, whereas a method is used, that the input trace is divided, each group is processed by using separate computers, and the results are summed up. 3 refs., 4 figs.

  16. Diagnostic value of 3D time-of-flight magnetic resonance angiography for detecting intracranial aneurysm: a meta-analysis.

    Science.gov (United States)

    HaiFeng, Liu; YongSheng, Xu; YangQin, Xun; Yu, Dou; ShuaiWen, Wang; XingRu, Lu; JunQiang, Lei

    2017-11-01

    This meta-analysis is to comprehensively evaluate the diagnostic performance of three-dimensional time-of-flight magnetic resonance angiography (3D-TOF-MRA) for detecting intracranial aneurysm (IA). PubMed, Embase, Web of Science, and the Cochrane library were systematically searched for retrieving eligible studies. Study inclusion, data extraction, and risk of bias assessment were performed by two researchers independently. Pooled sensitivity (SEN), specificity (SPE), positive likelihood ratio (PLR), negative likelihood ratio (NLR), diagnostic odds ratio (DOR), and area under the curve (AUC) were calculated to assess the diagnostic value. In addition, heterogeneity and subgroup analysis were carried out. In total, 18 studies comprising 3463 patients were selected. The results of 3D-TOF-MRA for diagnosing IA were SEN 0.89 (95% CI 0.82-0.94), SPE 0.94 (0.86-0.97), PLR 13.79 (5.92-32.12), NLR 0.11 (0.07-0.19), DOR 121.90 (38.81-382.94), and AUC 0.96 (0.94-0.98), respectively. In the subgroup analysis, studies without subarachnoid hemorrhage (SAH) tend to perform statistical significantly better (P 3D-TOF-MRA had better SEN in aneurysms > 3 mm than the aneurysms ≤ 3 mm in diameter: 0.89 (0.87-0.92) vs. 0.78 (0.71-0.84) with P 3D-TOF-MRA has an excellent diagnostic performance for the overall assessment of IA and may serve as an alternative for further patient management with IA.

  17. The real-time interactive 3-D-DVA for robust coronary MRA.

    Science.gov (United States)

    Sachs, T S; Meyer, C H; Pauly, J M; Hu, B S; Nishimura, D G; Macovski, A

    2000-02-01

    A graphical user interface (GUI) has been developed which enables interactive feedback and control to the real-time diminishing variance algorithm (DVA). This interactivity allows the user to set scan parameters, view scan statistics, and view image updates during the course of the scan. In addition, the DVA has been extended to simultaneously reduce motion artifacts in three dimensions using three orthogonal navigators. Preliminary in vivo studies indicate that these improvements to the standard DVA allow for significantly improved consistency and robustness in eliminating respiratory motion artifacts from MR images, particularly when imaging the coronary arteries.

  18. 3D time-domain spectral elements for stress waves modelling

    International Nuclear Information System (INIS)

    Kudela, P; Ostachowicz, W

    2009-01-01

    Elastic stress waves induced by piezoelectric transducers are extensively used for damage detection purposes. Induced high frequency impulse signals cause that stress wave modelling by the finite element method is inefficient. Instead, numerical model based on the time-domain spectral element method has been developed to simulate stress wave propagation in metallic structures induced by the piezoelectric transducers. The model solves the coupled electromechanical field equations simultaneously in three-dimensional case. Visualisation of the propagating elastic waves generated by the actuator of different shapes and properties has been performed.

  19. Large Time Behavior for Weak Solutions of the 3D Globally Modified Navier-Stokes Equations

    Directory of Open Access Journals (Sweden)

    Junbai Ren

    2014-01-01

    Full Text Available This paper is concerned with the large time behavior of the weak solutions for three-dimensional globally modified Navier-Stokes equations. With the aid of energy methods and auxiliary decay estimates together with Lp-Lq estimates of heat semigroup, we derive the optimal upper and lower decay estimates of the weak solutions for the globally modified Navier-Stokes equations as C1(1+t-3/4≤uL2≤C2(1+t-3/4,  t>1. The decay rate is optimal since it coincides with that of heat equation.

  20. Time-resolved Particle Image Velocimetry measurements of the 3D random Richtmyer-Meshkov Instability

    Science.gov (United States)

    Sewell, Everest; Krivets, Vitaliy; Jacobs, Jeffrey

    2017-11-01

    The vertical shock tube at the University of Arizona is used to perform experiments on the multi-mode three-dimensional Richtmyer-Meshkov Instability (RMI). An interface of air and sulfur hexafluoride is formed in a counter flow configuration, and is excited using voice coils to produce faraday-like multi-modal perturbations.This interface is shock accelerated by an approximately Mach 1.2 shockwave to form the RMI. Time resolved Particle Image Velocimetry (PIV) is used to perform analysis of the evolving instability.

  1. Real-time 3-D SAFT-UT system evaluation and validation

    International Nuclear Information System (INIS)

    Doctor, S.R.; Schuster, G.J.; Reid, L.D.; Hall, T.E.

    1996-09-01

    SAFT-UT technology is shown to provide significant enhancements to the inspection of materials used in US nuclear power plants. This report provides guidelines for the implementation of SAFT-UT technology and shows the results from its application. An overview of the development of SAFT-UT is provided so that the reader may become familiar with the technology. Then the basic fundamentals are presented with an extensive list of references. A comprehensive operating procedure, which is used in conjunction with the SAFT-UT field system developed by Pacific Northwest Laboratory (PNL), provides the recipe for both SAFT data acquisition and analysis. The specification for the hardware implementation is provided for the SAFT-UT system along with a description of the subsequent developments and improvements. One development of technical interest is the SAFT real time processor. Performance of the real-time processor is impressive and comparison is made of this dedicated parallel processor to a conventional computer and to the newer high-speed computer architectures designed for image processing. Descriptions of other improvements, including a robotic scanner, are provided. Laboratory parametric and application studies, performed by PNL and not previously reported, are discussed followed by a section on field application work in which SAFT was used during inservice inspections of operating reactors

  2. Time domain SAR raw data simulation using CST and image focusing of 3D objects

    Science.gov (United States)

    Saeed, Adnan; Hellwich, Olaf

    2017-10-01

    This paper presents the use of a general purpose electromagnetic simulator, CST, to simulate realistic synthetic aperture radar (SAR) raw data of three-dimensional objects. Raw data is later focused in MATLAB using range-doppler algorithm. Within CST Microwave Studio a replica of TerraSAR-X chirp signal is incident upon a modeled Corner Reflector (CR) whose design and material properties are identical to that of the real one. Defining mesh and other appropriate settings reflected wave is measured at several distant points within a line parallel to the viewing direction. This is analogous to an array antenna and is synthesized to create a long aperture for SAR processing. The time domain solver in CST is based on the solution of differential form of Maxwells equations. Exported data from CST is arranged into a 2-d matrix of axis range and azimuth. Hilbert transform is applied to convert the real signal to complex data with phase information. Range compression, range cell migration correction (RCMC), and azimuth compression are applied in time domain to obtain the final SAR image. This simulation can provide valuable information to clarify which real world objects cause images suitable for high accuracy identification in the SAR images.

  3. Real-time 3-D SAFT-UT system evaluation and validation

    Energy Technology Data Exchange (ETDEWEB)

    Doctor, S.R.; Schuster, G.J.; Reid, L.D.; Hall, T.E. [Pacific Northwest National Lab., Richland, WA (United States)

    1996-09-01

    SAFT-UT technology is shown to provide significant enhancements to the inspection of materials used in US nuclear power plants. This report provides guidelines for the implementation of SAFT-UT technology and shows the results from its application. An overview of the development of SAFT-UT is provided so that the reader may become familiar with the technology. Then the basic fundamentals are presented with an extensive list of references. A comprehensive operating procedure, which is used in conjunction with the SAFT-UT field system developed by Pacific Northwest Laboratory (PNL), provides the recipe for both SAFT data acquisition and analysis. The specification for the hardware implementation is provided for the SAFT-UT system along with a description of the subsequent developments and improvements. One development of technical interest is the SAFT real time processor. Performance of the real-time processor is impressive and comparison is made of this dedicated parallel processor to a conventional computer and to the newer high-speed computer architectures designed for image processing. Descriptions of other improvements, including a robotic scanner, are provided. Laboratory parametric and application studies, performed by PNL and not previously reported, are discussed followed by a section on field application work in which SAFT was used during inservice inspections of operating reactors.

  4. Diffuse mirrors: 3D reconstruction from diffuse indirect illumination using inexpensive time-of-flight sensors

    KAUST Repository

    Heide, Felix

    2014-06-01

    The functional difference between a diffuse wall and a mirror is well understood: one scatters back into all directions, and the other one preserves the directionality of reflected light. The temporal structure of the light, however, is left intact by both: assuming simple surface reflection, photons that arrive first are reflected first. In this paper, we exploit this insight to recover objects outside the line of sight from second-order diffuse reflections, effectively turning walls into mirrors. We formulate the reconstruction task as a linear inverse problem on the transient response of a scene, which we acquire using an affordable setup consisting of a modulated light source and a time-of-flight image sensor. By exploiting sparsity in the reconstruction domain, we achieve resolutions in the order of a few centimeters for object shape (depth and laterally) and albedo. Our method is robust to ambient light and works for large room-sized scenes. It is drastically faster and less expensive than previous approaches using femtosecond lasers and streak cameras, and does not require any moving parts.

  5. Microscopic description of fission dynamics: Toward a 3D computation of the time dependent GCM equation

    Directory of Open Access Journals (Sweden)

    Regnier D.

    2017-01-01

    Full Text Available Accurate knowledge of fission fragment yields is an essential ingredient of numerous applications ranging from the formation of elements in the r-process to fuel cycle optimization in nuclear energy. The need for a predictive theory applicable where no data is available, together with the variety of potential applications, is an incentive to develop a fully microscopic approach to fission dynamics. One of the most promising theoretical frameworks is the time dependent generator coordinate method (TDGCM applied under the Gaussian overlap approximation (GOA. However, the computational cost of this method makes it difficult to perform calculations with more than two collective degree of freedom. Meanwhile, it is well-known from both semi-phenomenological and fully microscopic approaches that at least four or five dimensions may play a role in the dynamics of fission. To overcome this limitation, we develop the code FELIX aiming to solve the TDGCM+GOA equation for an arbitrary number of collective variables. In this talk, we report the recent progress toward this enriched description of fission dynamics. We will briefly present the numerical methods adopted as well as the status of the latest version of FELIX. Finally, we will discuss fragments yields obtained within this approach for the low energy fission of major actinides.

  6. Multiplexed measurements by time resolved spectroscopy using colloidal CdSe/ZnS quantum dots

    Science.gov (United States)

    Kaiser, U.; Jimenez de Aberasturi, D.; Malinowski, R.; Amin, F.; Parak, W. J.; Heimbrodt, W.

    2014-01-01

    Multiplexed measurements of analytes in parallel is a topical demand in bioanalysis and bioimaging. An interesting alternative to commonly performed spectral multiplexing is lifetime multiplexing. In this Letter, we present a proof of principle of single-color lifetime multiplexing by coupling the same fluorophore to different nanoparticles. The effective lifetime of the fluorophores can be tuned by more than one order of magnitude due to resonance energy transfer from donor states. Measurements have been done on a model systems consisting of ATTO-590 dye molecules linked to either gold particles or to CdSe/ZnS core shell quantum dots. Both systems show the same luminescence spectrum of ATTO-590 dye emission in continuous wave excitation, but can be distinguished by means of time resolved measurements. The dye molecules bound to gold particles exhibit a mono-exponential decay with a lifetime of 4.5 ns, whereas the dye molecules bound to CdSe/ZnS dots show a nonexponential decay with a slow component of about 135 ns due to the energy transfer from the quantum dots. We demonstrate the fundamental possibility to determine the mixing ratio for dyes with equal luminescence spectra but very different transients. This opens up a pathway independent of the standard optical multiplexing with many different fluorophores emitting from the near ultraviolet to the near infrared spectral region.

  7. Multiplexed measurements by time resolved spectroscopy using colloidal CdSe/ZnS quantum dots

    Energy Technology Data Exchange (ETDEWEB)

    Kaiser, U.; Jimenez de Aberasturi, D.; Malinowski, R.; Amin, F.; Parak, W. J.; Heimbrodt, W., E-mail: Wolfram.Heimbrodt@physik.uni-marburg.de [Department of Physics and Materials Sciences Center, Philipps-University of Marburg, Renthof 5, D-35032 Marburg (Germany)

    2014-01-27

    Multiplexed measurements of analytes in parallel is a topical demand in bioanalysis and bioimaging. An interesting alternative to commonly performed spectral multiplexing is lifetime multiplexing. In this Letter, we present a proof of principle of single-color lifetime multiplexing by coupling the same fluorophore to different nanoparticles. The effective lifetime of the fluorophores can be tuned by more than one order of magnitude due to resonance energy transfer from donor states. Measurements have been done on a model systems consisting of ATTO-590 dye molecules linked to either gold particles or to CdSe/ZnS core shell quantum dots. Both systems show the same luminescence spectrum of ATTO-590 dye emission in continuous wave excitation, but can be distinguished by means of time resolved measurements. The dye molecules bound to gold particles exhibit a mono-exponential decay with a lifetime of 4.5 ns, whereas the dye molecules bound to CdSe/ZnS dots show a nonexponential decay with a slow component of about 135 ns due to the energy transfer from the quantum dots. We demonstrate the fundamental possibility to determine the mixing ratio for dyes with equal luminescence spectra but very different transients. This opens up a pathway independent of the standard optical multiplexing with many different fluorophores emitting from the near ultraviolet to the near infrared spectral region.

  8. Novel real-time 3D radiological mapping solution for ALARA maximization, D and D assessments and radiological management

    Energy Technology Data Exchange (ETDEWEB)

    Dubart, Philippe; Hautot, Felix [AREVA Group, 1 route de la Noue, Gif sur Yvette (France); Morichi, Massimo; Abou-Khalil, Roger [AREVA Group, Tour AREVA-1, place Jean Millier, Paris (France)

    2015-07-01

    Good management of dismantling and decontamination (D and D) operations and activities is requiring safety, time saving and perfect radiological knowledge of the contaminated environment as well as optimization for personnel dose and minimization of waste volume. In the same time, Fukushima accident has imposed a stretch to the nuclear measurement operational approach requiring in such emergency situation: fast deployment and intervention, quick analysis and fast scenario definition. AREVA, as return of experience from his activities carried out at Fukushima and D and D sites has developed a novel multi-sensor solution as part of his D and D research, approach and method, a system with real-time 3D photo-realistic spatial radiation distribution cartography of contaminated premises. The system may be hand-held or mounted on a mobile device (robot, drone, e.g). In this paper, we will present our current development based on a SLAM technology (Simultaneous Localization And Mapping) and integrated sensors and detectors allowing simultaneous topographic and radiological (dose rate and/or spectroscopy) data acquisitions. This enabling technology permits 3D gamma activity cartography in real-time. (authors)

  9. Novel real-time 3D radiological mapping solution for ALARA maximization, D and D assessments and radiological management

    International Nuclear Information System (INIS)

    Dubart, Philippe; Hautot, Felix; Morichi, Massimo; Abou-Khalil, Roger

    2015-01-01

    Good management of dismantling and decontamination (D and D) operations and activities is requiring safety, time saving and perfect radiological knowledge of the contaminated environment as well as optimization for personnel dose and minimization of waste volume. In the same time, Fukushima accident has imposed a stretch to the nuclear measurement operational approach requiring in such emergency situation: fast deployment and intervention, quick analysis and fast scenario definition. AREVA, as return of experience from his activities carried out at Fukushima and D and D sites has developed a novel multi-sensor solution as part of his D and D research, approach and method, a system with real-time 3D photo-realistic spatial radiation distribution cartography of contaminated premises. The system may be hand-held or mounted on a mobile device (robot, drone, e.g). In this paper, we will present our current development based on a SLAM technology (Simultaneous Localization And Mapping) and integrated sensors and detectors allowing simultaneous topographic and radiological (dose rate and/or spectroscopy) data acquisitions. This enabling technology permits 3D gamma activity cartography in real-time. (authors)

  10. Precise 3D Track Reconstruction Algorithm for the ICARUS T600 Liquid Argon Time Projection Chamber Detector

    Directory of Open Access Journals (Sweden)

    M. Antonello

    2013-01-01

    Full Text Available Liquid Argon Time Projection Chamber (LAr TPC detectors offer charged particle imaging capability with remarkable spatial resolution. Precise event reconstruction procedures are critical in order to fully exploit the potential of this technology. In this paper we present a new, general approach to 3D reconstruction for the LAr TPC with a practical application to the track reconstruction. The efficiency of the method is evaluated on a sample of simulated tracks. We present also the application of the method to the analysis of stopping particle tracks collected during the ICARUS T600 detector operation with the CNGS neutrino beam.

  11. 3D Near Infrared and Ultrasound Imaging of Peripheral Blood Vessels for Real-Time Localization and Needle Guidance.

    Science.gov (United States)

    Chen, Alvin I; Balter, Max L; Maguire, Timothy J; Yarmush, Martin L

    2016-10-01

    This paper presents a portable imaging device designed to detect peripheral blood vessels for cannula insertion that are otherwise difficult to visualize beneath the skin. The device combines near infrared stereo vision, ultrasound, and real-time image analysis to map the 3D structure of subcutaneous vessels. We show that the device can identify adult forearm vessels and be used to guide manual insertions in tissue phantoms with increased first-stick accuracy compared to unassisted cannulation. We also demonstrate that the system may be coupled with a robotic manipulator to perform automated, image-guided venipuncture.

  12. Fast, free-breathing, in vivo fetal imaging using time-resolved 3D MRI technique: preliminary results

    OpenAIRE

    Liu, Jing; Glenn, Orit A.; Xu, Duan

    2014-01-01

    Fetal MR imaging is very challenging due to the movement of fetus and the breathing motion of the mother. Current clinical protocols involve quick 2D scouting scans to determine scan plane and often several attempts to reorient the scan plane when the fetus moves. This makes acquisition of fetal MR images clinically challenging and results in long scan times in order to obtain images that are of diagnostic quality. Compared to 2D imaging, 3D imaging of the fetus has many advantages such as hi...

  13. Regional Gastrointestinal Transit Times in Patients With Carcinoid Diarrhea: Assessment With the Novel 3D-Transit System.

    Science.gov (United States)

    Gregersen, Tine; Haase, Anne-Mette; Schlageter, Vincent; Gronbaek, Henning; Krogh, Klaus

    2015-07-30

    The paucity of knowledge regarding gastrointestinal motility in patients with neuroendocrine tumors and carcinoid diarrhea re-stricts targeted treatment. 3D-Transit is a novel, minimally invasive, ambulatory method for description of gastrointestinal motility. The system has not yet been evaluated in any group of patients. We aimed to test the performance of 3D-Transit in patients with carcinoid diarrhea and to compare the patients' regional gastrointestinal transit times (GITT) and colonic motility patterns with those of healthy subjects. Fifteen healthy volunteers and seven patients with neuroendocrine tumor and at least 3 bowel movements per day were inves-tigated with 3D-Transit and standard radiopaque markers. Total GITT assessed with 3D-Transit and radiopaque markers were well correlated (Spearman's rho = 0.64, P = 0.002). Median total GITT was 12.5 (range: 8.5-47.2) hours in patients versus 25.1 (range: 13.1-142.3) hours in healthy (P = 0.007). There was no difference in gastric emptying (P = 0.778). Median small intestinal transit time was 3.8 (range: 1.4-5.5) hours in patients versus 4.4 (range: 1.8-7.2) hours in healthy subjects (P = 0.044). Median colorectal transit time was 5.2 (range: 2.9-40.1) hours in patients versus 18.1 (range: 5.0-134.0) hours in healthy subjects (P = 0.012). Median frequency of pansegmental co-lonic movements was 0.45 (range: 0.03-1.02) per hour in patients and 0.07 (range: 0-0.61) per hour in healthy subjects (P = 0.045). Three-dimensional Transit allows assessment of regional GITT in patients with diarrhea. Patients with carcinoid diarrhea have faster than normal gastrointestinal transit due to faster small intestinal and colorectal transit times. The latter is caused by an increased frequency of pansegmental colonic movements.

  14. Real-Time Propagation Measurement System and Scattering Object Identification by 3D Visualization by Using VRML for ETC System

    Directory of Open Access Journals (Sweden)

    Ando Tetsuo

    2009-01-01

    Full Text Available In the early deployment of electric toll collecting (ETC system, multipath interference has caused the malfunction of the system. Therefore, radio absorbers are installed in the toll gate to suppress the scattering effects. This paper presents a novel radio propagation measurement system using the beamforming with 8-elmenet antenna array to examine the power intensity distribution of the ETC gate in real time without closing the toll gates that are already open for traffic. In addition, an identification method of the individual scattering objects with 3D visualization by using virtual reality modeling language will be proposed and the validity is also demonstrated by applying to the measurement data.

  15. Origins Space Telescope: 3D infrared surveys of star formation and black hole growth in galaxies over cosmic time

    Science.gov (United States)

    Pope, Alexandra; Armus, Lee; bradford, charles; Origins Space Telescope STDT

    2018-01-01

    In the coming decade, new telescope facilities and surveys aim to provide a 3D map of the unobscured Universe over cosmic time. However, much of galaxy formation and evolution occurs behind dust, and is only observable through infrared observations. Previous extragalactic infrared surveys were fundamentally limited to a 2D mapping of the most extreme populations of galaxies due to spatial resolution and sensitivity. The Origins Space Telescope (OST) is the mission concept for the Far-Infrared Surveyor, one of the four science and technology definition studies sponsored by NASA to provide input to the 2020 Astronomy and Astrophysics Decadal survey. OST is planned to be a large aperture, actively-cooled telescope covering a wide span of the mid- to far-infrared spectrum, which will achieve spectral line sensitivities up to 1000 times deeper than previous infrared facilities. With powerful instruments such as the Medium Resolution Survey Spectrometer (MRSS), capable of simultaneous imaging and spectroscopy, the extragalactic infrared sky can finally be surveyed in 3D. In addition to spectroscopic redshifts, the rich suite of lines in the infrared provides unique diagnostics of the ongoing star formation (both obscured and unobscured) and the central supermassive black hole growth. In this poster, we present a simulated extragalactic survey with OST/MRSS which will detect millions of galaxies down to well below the knee of the infrared luminosity function. We demonstrate how this survey can map the coeval star formation and black hole growth in galaxies over cosmic time.

  16. Lapse-time-dependent coda-wave depth sensitivity to local velocity perturbations in 3-D heterogeneous elastic media

    Science.gov (United States)

    Obermann, Anne; Planès, Thomas; Hadziioannou, Céline; Campillo, Michel

    2016-10-01

    In the context of seismic monitoring, recent studies made successful use of seismic coda waves to locate medium changes on the horizontal plane. Locating the depth of the changes, however, remains a challenge. In this paper, we use 3-D wavefield simulations to address two problems: first, we evaluate the contribution of surface- and body-wave sensitivity to a change at depth. We introduce a thin layer with a perturbed velocity at different depths and measure the apparent relative velocity changes due to this layer at different times in the coda and for different degrees of heterogeneity of the model. We show that the depth sensitivity can be modelled as a linear combination of body- and surface-wave sensitivity. The lapse-time-dependent sensitivity ratio of body waves and surface waves can be used to build 3-D sensitivity kernels for imaging purposes. Second, we compare the lapse-time behaviour in the presence of a perturbation in horizontal and vertical slabs to address, for instance, the origin of the velocity changes detected after large earthquakes.

  17. Real-time 3D visualization of the thoraco-abdominal surface during breathing with body movement and deformation extraction

    International Nuclear Information System (INIS)

    Povšič, K; Jezeršek, M; Možina, J

    2015-01-01

    Real-time 3D visualization of the breathing displacements can be a useful diagnostic tool in order to immediately observe the most active regions on the thoraco-abdominal surface. The developed method is capable of separating non-relevant torso movement and deformations from the deformations that are solely related to breathing. This makes it possible to visualize only the breathing displacements. The system is based on the structured laser triangulation principle, with simultaneous spatial and color data acquisition of the thoraco-abdominal region. Based on the tracking of the attached passive markers, the torso movement and deformation is compensated using rigid and non-rigid transformation models on the three-dimensional (3D) data. The total time of 3D data processing together with visualization equals 20 ms per cycle.In vitro verification of the rigid movement extraction was performed using the iterative closest point algorithm as a reference. Furthermore, a volumetric evaluation on a live subject was performed to establish the accuracy of the rigid and non-rigid model. The root mean square deviation between the measured and the reference volumes shows an error of  ±0.08 dm 3 for rigid movement extraction. Similarly, the error was calculated to be  ±0.02 dm 3 for torsional deformation extraction and  ±0.11 dm 3 for lateral bending deformation extraction. The results confirm that during the torso movement and deformation, the proposed method is sufficiently accurate to visualize only the displacements related to breathing. The method can be used, for example, during the breathing exercise on an indoor bicycle or a treadmill. (paper)

  18. 1D-3D hybrid modeling-from multi-compartment models to full resolution models in space and time.

    Science.gov (United States)

    Grein, Stephan; Stepniewski, Martin; Reiter, Sebastian; Knodel, Markus M; Queisser, Gillian

    2014-01-01

    Investigation of cellular and network dynamics in the brain by means of modeling and simulation has evolved into a highly interdisciplinary field, that uses sophisticated modeling and simulation approaches to understand distinct areas of brain function. Depending on the underlying complexity, these models vary in their level of detail, in order to cope with the attached computational cost. Hence for large network simulations, single neurons are typically reduced to time-dependent signal processors, dismissing the spatial aspect of each cell. For single cell or networks with relatively small numbers of neurons, general purpose simulators allow for space and time-dependent simulations of electrical signal processing, based on the cable equation theory. An emerging field in Computational Neuroscience encompasses a new level of detail by incorporating the full three-dimensional morphology of cells and organelles into three-dimensional, space and time-dependent, simulations. While every approach has its advantages and limitations, such as computational cost, integrated and methods-spanning simulation approaches, depending on the network size could establish new ways to investigate the brain. In this paper we present a hybrid simulation approach, that makes use of reduced 1D-models using e.g., the NEURON simulator-which couples to fully resolved models for simulating cellular and sub-cellular dynamics, including the detailed three-dimensional morphology of neurons and organelles. In order to couple 1D- and 3D-simulations, we present a geometry-, membrane potential- and intracellular concentration mapping framework, with which graph- based morphologies, e.g., in the swc- or hoc-format, are mapped to full surface and volume representations of the neuron and computational data from 1D-simulations can be used as boundary conditions for full 3D simulations and vice versa. Thus, established models and data, based on general purpose 1D-simulators, can be directly coupled to the

  19. Induced tauopathy in a novel 3D-culture model mediates neurodegenerative processes: a real-time study on biochips.

    Directory of Open Access Journals (Sweden)

    Diana Seidel

    Full Text Available Tauopathies including Alzheimer's disease represent one of the major health problems of aging population worldwide. Therefore, a better understanding of tau-dependent pathologies and consequently, tau-related intervention strategies is highly demanded. In recent years, several tau-focused therapies have been proposed with the aim to stop disease progression. However, to develop efficient active pharmaceutical ingredients for the broad treatment of Alzheimer's disease patients, further improvements are necessary for understanding the detailed neurodegenerative processes as well as the mechanism and side effects of potential active pharmaceutical ingredients (API in the neuronal system. In this context, there is a lack of suitable complex in vitro cell culture models recapitulating major aspects of taupathological degenerative processes in sufficient time and reproducible manner.Herewith, we describe a novel 3D SH-SY5Y cell-based, tauopathy model that shows advanced characteristics of matured neurons in comparison to monolayer cultures without the need of artificial differentiation promoting agents. Moreover, the recombinant expression of a novel highly pathologic fourfold mutated human tau variant lead to a fast and emphasized degeneration of neuritic processes. The neurodegenerative effects could be analyzed in real time and with high sensitivity using our unique microcavity array-based impedance spectroscopy measurement system. We were able to quantify a time- and concentration-dependent relative impedance decrease when Alzheimer's disease-like tau pathology was induced in the neuronal 3D cell culture model. In combination with the collected optical information, the degenerative processes within each 3D-culture could be monitored and analyzed. More strikingly, tau-specific regenerative effects caused by tau-focused active pharmaceutical ingredients could be quantitatively monitored by impedance spectroscopy.Bringing together our novel complex 3

  20. SU-E-T-353: Effects of Time and Temperature On a Potential Reusable 3D Dosimeter

    Energy Technology Data Exchange (ETDEWEB)

    Juang, T; Miles, D; Crockett, E [Medical Physics Graduate Program, Duke University Medical Center, Durham, NC (United States); Adamovics, J [Rider University, Skillman, NJ (United States); Oldham, M [Duke University Medical Center, Durham, NC (United States)

    2015-06-15

    Purpose: Preliminary studies of a novel, optically-clearing PRESAGE 3D dosimeter formulation (Presage-RU) demonstrated potential reusability. This study investigates the effects of time and temperature on the accuracy and reusability of Presage-RU, and reports on progress toward developing a reusable 3D dosimeter. Methods: Presage-RU was cast as small volume samples (1×1×4.5cm). The effect of dose response sensitivity with reirradiation and time was evaluated by irradiating samples from 0–10Gy, measuring change in optical density (ΔOD), clearing at room temperature (RT) (5–7 days to fully clear), and then repeating for a total of 5 irradiations. Effects of heating on clearing rate were investigated by irradiating samples to 8Gy, then tracking measurements with samples held at RT, 35°C, and 45°C. Two cylindrical dosimeters (11cm diameter, 9.5cm length) were evaluated for dosimetric accuracy when stored at RT and −3°C prior to irradiation. Plans delivered were 2 overlapping AP fields (RT) and VMAT (-3°C). Results: Heating the dosimeters reduced the clearing half-life from 16.3h at RT to 5.8h (35°C) and 5.1h (45°C), but also increased background ΔOD by 1.7x (35°C) and 2.3x (45°C). Reductions in dose response were more closely linked to age than reirradiation, and storage at RT showed pronounced desensitization from dosimeter edges. These results suggest desensitization from oxygen diffusion. It should be noted that atmospheric diffusion into the dosimeter is not seen in standard, single-use PRESAGE, and is likely caused by differences in the Presage-RU polyurethane matrix. The dosimeter kept in cold storage, however, showed no evidence of desensitization and exhibited accuracy on par with standard PRESAGE with a 3%/3mm 3D gamma passing rate of 98.1%. Conclusions: Presage-RU is sensitive to storage temperatures and time, both of which affect oxygen diffusion and subsequent desensitization. Development shows promising progress with further formulation

  1. A 3D Tomographic Model of Asia Based on Pn and P Travel Times from GT Events

    Science.gov (United States)

    Young, C. J.; Begnaud, M. L.; Ballard, S.; Phillips, W. S.; Hipp, J. R.; Steck, L. K.; Rowe, C. A.; Chang, M. C.

    2008-12-01

    Increasingly, nuclear explosion monitoring is focusing on detection, location, and identification of small events recorded at regional distances. Because Earth structure is highly variable on regional scales, locating events accurately at these distances requires the use of region-specific models to provide accurate travel times. Improved results have been achieved with composites of 1D models and with approximate 3D models with simplified upper mantle structures, but both approaches introduce non-physical boundaries that are problematic for operational monitoring use. Ultimately, what is needed is a true, seamless 3D model of the Earth. Towards that goal, we have developed a 3D tomographic model of the P velocity of the crust and mantle for the Asian continent. Our model is derived by an iterative least squares travel time inversion of more than one million Pn and teleseismic P picks from some 35,000 events recorded at 4,000+ stations. We invert for P velocities from the top of the crust to the core mantle boundary, along with source and receiver static time terms to account for the effects of event mislocation and unaccounted for fine-scale structure near the receiver. Because large portions of the model are under-constrained, we apply spatially varying damping, which constrains the inversion to update the starting model only where good data coverage is available. Our starting crustal model is taken from the a priori crust and upper mantle model of Asia developed through National Nuclear Security Administration laboratory collaboration, which is based on various global and regional studies, and we substantially increase the damping in the crust to discourage changes from this model. Our starting mantle model is AK135. To simplify the inversion, we fix the depths of the major mantle discontinuities (Moho, 410 km, 660 km). 3D rays are calculated using an implementation of the Um and Thurber ray pseudo-bending approach, with full enforcement of Snell's Law in 3D at

  2. Detection of three porcine vesicular viruses using multiplex real-time primer-probe energy transfer

    DEFF Research Database (Denmark)

    Rasmussen, Thomas Bruun; Uttenthal, Åse; Aguero, M.

    2006-01-01

    Rapid identification of the etiologic agent in infected animals is important for the control of an outbreak of vesicular disease in livestock. We have in the present study developed a multiplex real-time reverse transcription-PCR, based on primer-probe energy transfer (PriProET), for simultaneous...

  3. A Metaheuristic Scheduler for Time Division Multiplexed Network-on-Chip

    DEFF Research Database (Denmark)

    Sørensen, Rasmus Bo; Sparsø, Jens; Pedersen, Mark Ruvald

    2014-01-01

    This paper presents a metaheuristic scheduler for inter-processor communication in multi-processor platforms using time division multiplexed (TDM) networks on chip (NOC). Compared to previous works, the scheduler handles a broader and more general class of platforms. Another contribution, which has...

  4. Prediction of the eigenvectors for spatial multiplexing MIMO systems in time-varying channels

    DEFF Research Database (Denmark)

    Nguyen, Hung Tuan; Leus, Geert; Khaled, Nadia

    2005-01-01

    the performance of a prediction scheme for multiple input multiple output (MIMO) systems that apply spatial multiplexing. We aim at predicting the future precoder/decoder directly without going through the prediction of the channel matrix. The results show that in a slowly time varying channel an increase...

  5. Power transients in time-division multiplexed discrete Raman fibre amplifier

    Czech Academy of Sciences Publication Activity Database

    Karásek, Miroslav; Radil, J.; Vojtěch, J.

    2009-01-01

    Roč. 282, č. 14 (2009), s. 2944-2949 ISSN 0030-4018 R&D Projects: GA AV ČR 1ET300670503 Institutional research plan: CEZ:AV0Z20670512 Keywords : optical communications * optical fibre * time division multiplexing Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering Impact factor: 1.316, year: 2009

  6. DELTA 3D PRINTER

    Directory of Open Access Journals (Sweden)

    ȘOVĂILĂ Florin

    2016-07-01

    Full Text Available 3D printing is a very used process in industry, the generic name being “rapid prototyping”. The essential advantage of a 3D printer is that it allows the designers to produce a prototype in a very short time, which is tested and quickly remodeled, considerably reducing the required time to get from the prototype phase to the final product. At the same time, through this technique we can achieve components with very precise forms, complex pieces that, through classical methods, could have been accomplished only in a large amount of time. In this paper, there are presented the stages of a 3D model execution, also the physical achievement after of a Delta 3D printer after the model.

  7. SU-C-201-04: Noise and Temporal Resolution in a Near Real-Time 3D Dosimeter

    Energy Technology Data Exchange (ETDEWEB)

    Rilling, M [Department of physics, engineering physics and optics, Universite Laval, Quebec City, QC (Canada); Centre de recherche sur le cancer, Universite Laval, Quebec City, QC (Canada); Radiation oncology department, CHU de Quebec, Quebec City, QC (Canada); Center for optics, photonics and lasers, Universite Laval, Quebec City, Quebec (Canada); Goulet, M [Radiation oncology department, CHU de Quebec, Quebec City, QC (Canada); Beaulieu, L; Archambault, L [Department of physics, engineering physics and optics, Universite Laval, Quebec City, QC (Canada); Centre de recherche sur le cancer, Universite Laval, Quebec City, QC (Canada); Radiation oncology department, CHU de Quebec, Quebec City, QC (Canada); Thibault, S [Center for optics, photonics and lasers, Universite Laval, Quebec City, Quebec (Canada)

    2016-06-15

    Purpose: To characterize the performance of a real-time three-dimensional scintillation dosimeter in terms of signal-to-noise ratio (SNR) and temporal resolution of 3D dose measurements. This study quantifies its efficiency in measuring low dose levels characteristic of EBRT dynamic treatments, and in reproducing field profiles for varying multileaf collimator (MLC) speeds. Methods: The dosimeter prototype uses a plenoptic camera to acquire continuous images of the light field emitted by a 10×10×10 cm{sup 3} plastic scintillator. Using EPID acquisitions, ray tracing-based iterative tomographic algorithms allow millimeter-sized reconstruction of relative 3D dose distributions. Measurements were taken at 6MV, 400 MU/min with the scintillator centered at the isocenter, first receiving doses from 1.4 to 30.6 cGy. Dynamic measurements were then performed by closing half of the MLCs at speeds of 0.67 to 2.5 cm/s, at 0° and 90° collimator angles. A reference static half-field was obtained for measured profile comparison. Results: The SNR steadily increases as a function of dose and reaches a clinically adequate plateau of 80 at 10 cGy. Below this, the decrease in light collected and increase in pixel noise diminishes the SNR; nonetheless, the EPID acquisitions and the voxel correlation employed in the reconstruction algorithms result in suitable SNR values (>75) even at low doses. For dynamic measurements at varying MLC speeds, central relative dose profiles are characterized by gradients at %D{sub 50} of 8.48 to 22.7 %/mm. These values converge towards the 32.8 %/mm-gradient measured for the static reference field profile, but are limited by the dosimeter’s current acquisition rate of 1Hz. Conclusion: This study emphasizes the efficiency of the 3D dose distribution reconstructions, while identifying limits of the current prototype’s temporal resolution in terms of dynamic EBRT parameters. This work paves the way for providing an optimized, second

  8. Exploring Just-in-Time Teaching 3D Development as a Tool for Enhancing Knowledge and Understanding

    Directory of Open Access Journals (Sweden)

    Morag C.E. McFadyen

    2013-12-01

    Full Text Available The integumentary system (skin is the first line of defence in the body and part of the innate immune system. Within first year modules on Pharmaceutical Biology and Integrative Physiology in the Masters of Pharmacy degree at Robert Gordon University (RGU several software tools were used to support both lecture and coursework material for the immune and integumentary systems. However, students had difficulty visualizing the various layers of the skin and how they become affected by different skin lesions. As a response to these identified learning difficulties, a just-in-time teaching 3-Dimensional elearning object was developed using free-to-use 3D CAD packages alongside common elearning software. The outcome was a virtualised human arm equipped to illustrate and label primary or secondary skin lesions whilst allowing spatial manipulation of the arm. This allowed students to manipulate and identify the specific skin layers involved. Evaluation of student engagement and learning was favourable, with students reflecting that they had a better understanding of the topic. Initial findings from this study highlight the benefits of quick, low-cost 3D production processes as just-in-time teaching elearning tools that have a positive impact on students’ performance.

  9. An experimentally verified model for estimating the distance resolution capability of direct time of flight 3D optical imaging systems

    International Nuclear Information System (INIS)

    Nguyen, K Q K; Fisher, E M D; Walton, A J; Underwood, I

    2013-01-01

    This report introduces a new statistical model for time-resolved photon detection in a generic single-photon-sensitive sensor array. The model is validated by comparing modelled data with experimental data collected on a single-photon avalanche diode sensor array. Data produced by the model are used alongside corresponding experimental data to calculate, for the first time, the effective distance resolution of a pulsed direct time of flight 3D optical imaging system over a range of conditions using four peak-detection algorithms. The relative performance of the algorithms is compared. The model can be used to improve the system design process and inform selection of the optimal peak-detection algorithm. (paper)

  10. Diagnostic value of 3D time-of-flight magnetic resonance angiography for detecting intracranial aneurysm: a meta-analysis

    Energy Technology Data Exchange (ETDEWEB)

    Liu, HaiFeng; Xu, YongSheng [First Hospital of LanZhou University, Department of Radiology, Lanzhou, Gansu (China); First Clinical Medical College of LanZhou University, Lanzhou, Gansu (China); Xun, YangQin [Lanzhou University, Evidence-based Medicine Center, Lanzhou (China); Dou, Yu; Wang, ShuaiWen; Lu, XingRu; Lei, JunQiang [First Hospital of LanZhou University, Department of Radiology, Lanzhou, Gansu (China)

    2017-11-15

    This meta-analysis is to comprehensively evaluate the diagnostic performance of three-dimensional time-of-flight magnetic resonance angiography (3D-TOF-MRA) for detecting intracranial aneurysm (IA). PubMed, Embase, Web of Science, and the Cochrane library were systematically searched for retrieving eligible studies. Study inclusion, data extraction, and risk of bias assessment were performed by two researchers independently. Pooled sensitivity (SEN), specificity (SPE), positive likelihood ratio (PLR), negative likelihood ratio (NLR), diagnostic odds ratio (DOR), and area under the curve (AUC) were calculated to assess the diagnostic value. In addition, heterogeneity and subgroup analysis were carried out. In total, 18 studies comprising 3463 patients were selected. The results of 3D-TOF-MRA for diagnosing IA were SEN 0.89 (95% CI 0.82-0.94), SPE 0.94 (0.86-0.97), PLR 13.79 (5.92-32.12), NLR 0.11 (0.07-0.19), DOR 121.90 (38.81-382.94), and AUC 0.96 (0.94-0.98), respectively. In the subgroup analysis, studies without subarachnoid hemorrhage (SAH) tend to perform statistical significantly better (P < 0.05) in detecting IAs than studies with SAH 0.99 (0.98-1.00) vs. 0.89 (0.86-0.91). The diagnostic value of studies with a two-image reconstruction method was higher than studies with only one image reconstruction method: 0.99 (0.98-1.00) vs. 0.91 (0.89-0.94) with P < 0.05. The 3D-TOF-MRA had better SEN in aneurysms > 3 mm than the aneurysms ≤ 3 mm in diameter: 0.89 (0.87-0.92) vs. 0.78 (0.71-0.84) with P < 0.05. This study demonstrated that 3D-TOF-MRA has an excellent diagnostic performance for the overall assessment of IA and may serve as an alternative for further patient management with IA. (orig.)

  11. Travel time calculation in regular 3D grid in local and regional scale using fast marching method

    Science.gov (United States)

    Polkowski, M.

    2015-12-01

    Local and regional 3D seismic velocity models of crust and sediments are very important for numerous technics like mantle and core tomography, localization of local and regional events and others. Most of those techniques require calculation of wave travel time through the 3D model. This can be achieved using multiple approaches from simple ray tracing to advanced full waveform calculation. In this study simple and efficient implementation of fast marching method is presented. This method provides more information than ray tracing and is much less complicated than methods like full waveform being the perfect compromise. Presented code is written in C++, well commented and is easy to modify for different types of studies. Additionally performance is widely discussed including possibilities of multithreading and massive parallelism like GPU. Source code will be published in 2016 as it is part of the PhD thesis. National Science Centre Poland provided financial support for this work via NCN grant DEC-2011/02/A/ST10/00284.

  12. 3D Visualization of near real-time remote-sensing observation for hurricanes field campaign using Google Earth API

    Science.gov (United States)

    Li, P.; Turk, J.; Vu, Q.; Knosp, B.; Hristova-Veleva, S. M.; Lambrigtsen, B.; Poulsen, W. L.; Licata, S.

    2009-12-01

    NASA is planning a new field experiment, the Genesis and Rapid Intensification Processes (GRIP), in the summer of 2010 to better understand how tropical storms form and develop into major hurricanes. The DC-8 aircraft and the Global Hawk Unmanned Airborne System (UAS) will be deployed loaded with instruments for measurements including lightning, temperature, 3D wind, precipitation, liquid and ice water contents, aerosol and cloud profiles. During the field campaign, both the spaceborne and the airborne observations will be collected in real-time and integrated with the hurricane forecast models. This observation-model integration will help the campaign achieve its science goals by allowing team members to effectively plan the mission with current forecasts. To support the GRIP experiment, JPL developed a website for interactive visualization of all related remote-sensing observations in the GRIP’s geographical domain using the new Google Earth API. All the observations are collected in near real-time (NRT) with 2 to 5 hour latency. The observations include a 1KM blended Sea Surface Temperature (SST) map from GHRSST L2P products; 6-hour composite images of GOES IR; stability indices, temperature and vapor profiles from AIRS and AMSU-B; microwave brightness temperature and rain index maps from AMSR-E, SSMI and TRMM-TMI; ocean surface wind vectors, vorticity and divergence of the wind from QuikSCAT; the 3D precipitation structure from TRMM-PR and vertical profiles of cloud and precipitation from CloudSAT. All the NRT observations are collected from the data centers and science facilities at NASA and NOAA, subsetted, re-projected, and composited into hourly or daily data products depending on the frequency of the observation. The data products are then displayed on the 3D Google Earth plug-in at the JPL Tropical Cyclone Information System (TCIS) website. The data products offered by the TCIS in the Google Earth display include image overlays, wind vectors, clickable

  13. Cryogenic 3-D Detectors for Solar Physics

    Science.gov (United States)

    Stern, R. A.

    2003-05-01

    Space and ground-based astronomy is currently undergoing a revolution in detector technology with the advent of cryogenic sensors operating in the sub-Kelvin temperature range. These detectors provide non-dispersive energy resolution at optical through gamma ray energies (e.g, E/Δ E ˜ 1500 at 6 keV), high time resolution (msec or better), and can be made into arrays using a combination of microlithography and multiplexing using SQUID amplifiers. The application of such ``3-D'' detector technology to solar physics could lead to significant advances in our understanding of magnetic reconnection in the Sun, including X-ray jet phenomena, and active region dynamics. In this talk, I will review some of the basic principles of cryogenic 3-D detectors, current astronomical applications, and their potential for future NASA solar physics Explorer-class missions. This work was supported in part by the Lockheed Martin Independent Research Program

  14. Experimental demonstration of time- and mode-division multiplexed passive optical network

    Science.gov (United States)

    Ren, Fang; Li, Juhao; Tang, Ruizhi; Hu, Tao; Yu, Jinyi; Mo, Qi; He, Yongqi; Chen, Zhangyuan; Li, Zhengbin

    2017-07-01

    A time- and mode-division multiplexed passive optical network (TMDM-PON) architecture is proposed, in which each optical network unit (ONU) communicates with the optical line terminal (OLT) independently utilizing both different time slots and switched optical linearly polarized (LP) spatial modes. Combination of a mode multiplexer/demultiplexer (MUX/DEUX) and a simple N × 1 optical switch is employed to select the specific LP mode in each ONU. A mode-insensitive power splitter is used for signal broadcast/combination between OLT and ONUs. We theoretically propose a dynamic mode and time slot assignment scheme for TMDM-PON based on inter-ONU priority rating, in which the time delay and packet loss ratio's variation tendency are investigated by simulation. Moreover, we experimentally demonstrate 2-mode TMDM-PON transmission over 10 km FMF with 10-Gb/s on-off keying (OOK) signal and direct detection.

  15. Imaging subsurface migration of dissolved CO2 in a shallow aquifer using 3-D time-lapse electrical resistivity tomography

    DEFF Research Database (Denmark)

    Auken, Esben; Doetsch, Joseph; Fiandaca, Gianluca

    2014-01-01

    Contamination of groundwater by leaking CO2 is a potential risk of carbon sequestration. With the help of a field experiment in western Denmark, we investigate to what extent surface electrical resistivity tomography (ERT) can detect and image dissolved CO2 in a shallow aquifer. For this purpose...... of aeolian and glacial sands near the surface and marine sands below 10m depth. 3-D time-lapse ERT inversions clearly image the dissolved CO2 plume with decreased electrical resistivity values. We can image the geochemical changes induced by the dissolved CO2 until the end of the acquisition, 120days after......-intrusive surface electrical resistivity tomography. © 2013 Elsevier B.V....

  16. Single Molecule 3D Orientation in Time and Space: A 6D Dynamic Study on Fluorescently Labeled Lipid Membranes

    DEFF Research Database (Denmark)

    Börner, Richard; Ehrlich, Nicky; Hohlbein, Johannes

    2016-01-01

    . As the method is based on the detection of single photons, it additionally allows for performing fluorescence correlation spectroscopy (FCS) as well as dynamical anisotropy measurements thereby providing access to fast orientational dynamics down to the nanosecond time scale. The 3D orientation is particularly...... interesting in non-isotropic environments such as lipid membranes, which are of great importance in biology. We used giant unilamellar vesicles (GUVs) labeled with fluorescent dyes down to a single molecule concentration as a model system for both, assessing the robustness of the orientation determination...... simulations of the rotational dynamics of dipoles incorporated into lipid membranes. Our study offers a comprehensive view on the dye orientation behavior in a lipid membrane with high spatiotemporal resolution representing a six-dimensional fluorescence detection approach....

  17. Synchronization, retiming and time-division multiplexing of an asynchronous 10 gigabit NRZ Ethernet packet to Terabit Ethernet

    DEFF Research Database (Denmark)

    Hu, Hao; Laguardia Areal, Janaina; Mulvad, Hans Christian Hansen

    2011-01-01

    An asynchronous 10 Gb/s Ethernet packet with maximum packet size of 1518 bytes is synchronized and retimed to a master clock with 200 kHz frequency offset using a time lens. The NRZ packet is simultaneously converted into an RZ packet, then further pulse compressed to a FWHM of 400 fs and finally...... time-division multiplexed with a serial 1.28 Tb/s signal including a vacant time slot, thus forming a 1.29 Tb/s time-division multiplexed serial signal. Error-free performance of synchronizing, retiming, time-division multiplexing to a Terabit data stream and finally demultiplexing back to 10 Gb...

  18. A mobile sensing system for real-time 3D weld pool surface measurement in manual GTAW

    International Nuclear Information System (INIS)

    Zhang, Wei Jie; Xiao, Jun; Zhang, Yu Ming

    2016-01-01

    An innovative mobile sensing system has been developed to non-intrusively monitor the manual pipe gas tungsten arc welding (GTAW) process. The system consists of a projective torch held by a welder, and a sensory helmet on the welder’s head. The three-dimensional (3D) weld pool surface is effectively measured in real-time as the welder performs the weld despite the movements of the torch and the helmet. In this study, the sensing system is first analyzed by numerical simulations in which the adjustment boundaries of the torch and helmet, i.e. their translation and orientation ranges, for effective sensing have been determined. Then, the sensing system is further evaluated using a simulation platform in which the movements of the helmet/welder’s head is mimicked by a tripod head with 6 degree-of-freedom (DOF), and a convex spherical mirror with a comparable size of a typical weld pool in a GTAW process is applied as a weld pool substitute. The effectiveness of the proposed system is validated by successfully capturing laser reflections from the mirror without great constraints on the welder’s movements of the torch and the helmet. Based on the analysis of the spatial relations among the torch, the helmet and the weld pool, an innovative real-time algorithm is proposed to reconstruct the 3D weld pool surface. The effectiveness and robustness of the algorithm have been verified by accurately reconstructing the convex spherical mirror surface despite the movements of the torch and the helmet in the simulation platform. (paper)

  19. The Boom in 3D-Printed Sensor Technology

    Directory of Open Access Journals (Sweden)

    Yuanyuan Xu

    2017-05-01

    Full Text Available Future sensing applications will include high-performance features, such as toxin detection, real-time monitoring of physiological events, advanced diagnostics, and connected feedback. However, such multi-functional sensors require advancements in sensitivity, specificity, and throughput with the simultaneous delivery of multiple detection in a short time. Recent advances in 3D printing and electronics have brought us closer to sensors with multiplex advantages, and additive manufacturing approaches offer a new scope for sensor fabrication. To this end, we review the recent advances in 3D-printed cutting-edge sensors. These achievements demonstrate the successful application of 3D-printing technology in sensor fabrication, and the selected studies deeply explore the potential for creating sensors with higher performance. Further development of multi-process 3D printing is expected to expand future sensor utility and availability.

  20. MERRA Chem 3D IAU, Precip Mass Flux, Time average 3-hourly (eta coord edges, 1.25X1L73) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3FECHM or tavg3_3d_chm_Fe data product is the MERRA Data Assimilation System Chemistry 3-Dimensional chemistry on layers edges that is time averaged, 3D model...

  1. MERRA Chem 3D IAU States Cloud Precip, Time average 3-hourly (eta coord, 1.25x1L72) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3FVCHM or tavg3_3d_chm_Fv data product is the MERRA Data Assimilation System Chemistry 3-Dimensional chemistry on layers file that is time averaged, 3D model...

  2. 3D Vision Provides Shorter Operative Time and More Accurate Intraoperative Surgical Performance in Laparoscopic Hiatal Hernia Repair Compared With 2D Vision.

    Science.gov (United States)

    Leon, Piera; Rivellini, Roberta; Giudici, Fabiola; Sciuto, Antonio; Pirozzi, Felice; Corcione, Francesco

    2017-04-01

    The aim of this study is to evaluate if 3-dimensional high-definition (3D) vision in laparoscopy can prompt advantages over conventional 2D high-definition vision in hiatal hernia (HH) repair. Between September 2012 and September 2015, we randomized 36 patients affected by symptomatic HH to undergo surgery; 17 patients underwent 2D laparoscopic HH repair, whereas 19 patients underwent the same operation in 3D vision. No conversion to open surgery occurred. Overall operative time was significantly reduced in the 3D laparoscopic group compared with the 2D one (69.9 vs 90.1 minutes, P = .006). Operative time to perform laparoscopic crura closure did not differ significantly between the 2 groups. We observed a tendency to a faster crura closure in the 3D group in the subgroup of patients with mesh positioning (7.5 vs 8.9 minutes, P = .09). Nissen fundoplication was faster in the 3D group without mesh positioning ( P = .07). 3D vision in laparoscopic HH repair helps surgeon's visualization and seems to lead to operative time reduction. Advantages can result from the enhanced spatial perception of narrow spaces. Less operative time and more accurate surgery translate to benefit for patients and cost savings, compensating the high costs of the 3D technology. However, more data from larger series are needed to firmly assess the advantages of 3D over 2D vision in laparoscopic HH repair.

  3. Helicopter Flight Test of a Compact, Real-Time 3-D Flash Lidar for Imaging Hazardous Terrain During Planetary Landing

    Science.gov (United States)

    Roback, VIncent E.; Amzajerdian, Farzin; Brewster, Paul F.; Barnes, Bruce W.; Kempton, Kevin S.; Reisse, Robert A.; Bulyshev, Alexander E.

    2013-01-01

    A second generation, compact, real-time, air-cooled 3-D imaging Flash Lidar sensor system, developed from a number of cutting-edge components from industry and NASA, is lab characterized and helicopter flight tested under the Autonomous Precision Landing and Hazard Detection and Avoidance Technology (ALHAT) project. The ALHAT project is seeking to develop a guidance, navigation, and control (GN&C) and sensing system based on lidar technology capable of enabling safe, precise crewed or robotic landings in challenging terrain on planetary bodies under any ambient lighting conditions. The Flash Lidar incorporates a 3-D imaging video camera based on Indium-Gallium-Arsenide Avalanche Photo Diode and novel micro-electronic technology for a 128 x 128 pixel array operating at a video rate of 20 Hz, a high pulse-energy 1.06 µm Neodymium-doped: Yttrium Aluminum Garnet (Nd:YAG) laser, a remote laser safety termination system, high performance transmitter and receiver optics with one and five degrees field-of-view (FOV), enhanced onboard thermal control, as well as a compact and self-contained suite of support electronics housed in a single box and built around a PC-104 architecture to enable autonomous operations. The Flash Lidar was developed and then characterized at two NASA-Langley Research Center (LaRC) outdoor laser test range facilities both statically and dynamically, integrated with other ALHAT GN&C subsystems from partner organizations, and installed onto a Bell UH-1H Iroquois "Huey" helicopter at LaRC. The integrated system was flight tested at the NASA-Kennedy Space Center (KSC) on simulated lunar approach to a custom hazard field consisting of rocks, craters, hazardous slopes, and safe-sites near the Shuttle Landing Facility runway starting at slant ranges of 750 m. In order to evaluate different methods of achieving hazard detection, the lidar, in conjunction with the ALHAT hazard detection and GN&C system, operates in both a narrow 1deg FOV raster

  4. Non-contrast-enhanced 3D volumetric time-resolved MRA combining PCASL for intracranial vessels. President award proceedings

    International Nuclear Information System (INIS)

    Nakamura, Masanobu; Yoneyama, Masami; Tabuchi, Takashi; Tatsuno, Satoshi; Takemura, Atsushi; Obara, Makoto; Takahara, Taro

    2013-01-01

    Hemodynamic information is required for accurate diagnosis, effective treatment, and follow-up examination of numerous cerebrovascular diseases. A recently introduced technique for non-contrast 3-dimensional (3D) volumetric time-resolved magnetic resonance angiography (MRA)-contrast inherent inflow enhanced multi phase angiography (CINEMA)-provides useful qualitative information on the morphologic and dynamic filling of intracranial vessels and requires no catheter insertion or contrast agent. We propose combining CINEMA with pseudo-continuous arterial spin labeling (PCASL). We present a preliminary study of non-contrast time-resolved MRA with time-of-arrival map and discuss its clinical relevance. Studies in all volunteers and patients clearly depicted major intracranial vessels. In patients, CINEMA-PCASL demonstrated the nidus, feeding arteries, and right posterior cerebral artery, and subsequent draining into the superficial venous system was clearly observed with a temporal resolution of 200 ms. Time-of-arrival maps presented the different filling time of every segment vessel in a single colorful image. The expected pattern of delayed transit to more distal vessels is apparent as well as the earlier arrival in central portions of larger vessels. This preliminary study demonstrated the usefulness of the CINEMA-PCASL technique in evaluating the cerebral vasculature. Simultaneous acquisition of high quality temporal and spatial resolutions obviated the need for contrast agent. (author)

  5. A novel multiplex absorption spectrometer for time-resolved studies

    Science.gov (United States)

    Lewis, Thomas; Heard, Dwayne E.; Blitz, Mark A.

    2018-02-01

    A Time-Resolved Ultraviolet/Visible (UV/Vis) Absorption Spectrometer (TRUVAS) has been developed that can simultaneously monitor absorption at all wavelengths between 200 and 800 nm with millisecond time resolution. A pulsed photolysis laser (KrF 248 nm) is used to initiate chemical reactions that create the target species. The absorption signals from these species evolve as the composition of the gas in the photolysis region changes over time. The instrument can operate at pressures over the range ˜10-800 Torr and can measure time-resolved absorbances systems (in particular the Herriott cell), there are fundamental differences, most notably the ability to adjust each mirror to maximise the overlap between the probe beam and the photolysis laser. Another feature which aids the sensitivity and versatility of the system is the use of 2 high-throughput spectrographs coupled with sensitive line-array CCDs, which can measure absorbance from ˜200 to 800 nm simultaneously. The capability of the instrument is demonstrated via measurements of the absorption spectrum of the peroxy radical, HOCH2CH2O2, and its self-reaction kinetics.

  6. High-performance parallel solver for 3D time-dependent Schrodinger equation for large-scale nanosystems

    Science.gov (United States)

    Gainullin, I. K.; Sonkin, M. A.

    2015-03-01

    A parallelized three-dimensional (3D) time-dependent Schrodinger equation (TDSE) solver for one-electron systems is presented in this paper. The TDSE Solver is based on the finite-difference method (FDM) in Cartesian coordinates and uses a simple and explicit leap-frog numerical scheme. The simplicity of the numerical method provides very efficient parallelization and high performance of calculations using Graphics Processing Units (GPUs). For example, calculation of 106 time-steps on the 1000ṡ1000ṡ1000 numerical grid (109 points) takes only 16 hours on 16 Tesla M2090 GPUs. The TDSE Solver demonstrates scalability (parallel efficiency) close to 100% with some limitations on the problem size. The TDSE Solver is validated by calculation of energy eigenstates of the hydrogen atom (13.55 eV) and affinity level of H- ion (0.75 eV). The comparison with other TDSE solvers shows that a GPU-based TDSE Solver is 3 times faster for the problems of the same size and with the same cost of computational resources. The usage of a non-regular Cartesian grid or problem-specific non-Cartesian coordinates increases this benefit up to 10 times. The TDSE Solver was applied to the calculation of the resonant charge transfer (RCT) in nanosystems, including several related physical problems, such as electron capture during H+-H0 collision and electron tunneling between H- ion and thin metallic island film.

  7. A robust real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system.

    Science.gov (United States)

    Liu, Wenyang; Cheung, Yam; Sawant, Amit; Ruan, Dan

    2016-05-01

    To develop a robust and real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system. The authors have developed a robust and fast surface reconstruction method on point clouds acquired by the photogrammetry system, without explicitly solving the partial differential equation required by a typical variational approach. Taking advantage of the overcomplete nature of the acquired point clouds, their method solves and propagates a sparse linear relationship from the point cloud manifold to the surface manifold, assuming both manifolds share similar local geometry. With relatively consistent point cloud acquisitions, the authors propose a sparse regression (SR) model to directly approximate the target point cloud as a sparse linear combination from the training set, assuming that the point correspondences built by the iterative closest point (ICP) is reasonably accurate and have residual errors following a Gaussian distribution. To accommodate changing noise levels and/or presence of inconsistent occlusions during the acquisition, the authors further propose a modified sparse regression (MSR) model to model the potentially large and sparse error built by ICP with a Laplacian prior. The authors evaluated the proposed method on both clinical point clouds acquired under consistent acquisition conditions and on point clouds with inconsistent occlusions. The authors quantitatively evaluated the reconstruction performance with respect to root-mean-squared-error, by comparing its reconstruction results against that from the variational method. On clinical point clouds, both the SR and MSR models have achieved sub-millimeter reconstruction accuracy and reduced the reconstruction time by two orders of magnitude to a subsecond reconstruction time. On point clouds with inconsistent occlusions, the MSR model has demonstrated its advantage in achieving consistent and robust performance despite the introduced occlusions. The authors have

  8. A robust real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Wenyang [Department of Bioengineering, University of California, Los Angeles, Los Angeles, California 90095 (United States); Cheung, Yam [Department of Radiation Oncology, University of Texas Southwestern, Dallas, Texas 75390 (United States); Sawant, Amit [Department of Radiation Oncology, University of Texas Southwestern, Dallas, Texas, 75390 and Department of Radiation Oncology, University of Maryland, College Park, Maryland 20742 (United States); Ruan, Dan, E-mail: druan@mednet.ucla.edu [Department of Bioengineering, University of California, Los Angeles, Los Angeles, California 90095 and Department of Radiation Oncology, University of California, Los Angeles, Los Angeles, California 90095 (United States)

    2016-05-15

    Purpose: To develop a robust and real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system. Methods: The authors have developed a robust and fast surface reconstruction method on point clouds acquired by the photogrammetry system, without explicitly solving the partial differential equation required by a typical variational approach. Taking advantage of the overcomplete nature of the acquired point clouds, their method solves and propagates a sparse linear relationship from the point cloud manifold to the surface manifold, assuming both manifolds share similar local geometry. With relatively consistent point cloud acquisitions, the authors propose a sparse regression (SR) model to directly approximate the target point cloud as a sparse linear combination from the training set, assuming that the point correspondences built by the iterative closest point (ICP) is reasonably accurate and have residual errors following a Gaussian distribution. To accommodate changing noise levels and/or presence of inconsistent occlusions during the acquisition, the authors further propose a modified sparse regression (MSR) model to model the potentially large and sparse error built by ICP with a Laplacian prior. The authors evaluated the proposed method on both clinical point clouds acquired under consistent acquisition conditions and on point clouds with inconsistent occlusions. The authors quantitatively evaluated the reconstruction performance with respect to root-mean-squared-error, by comparing its reconstruction results against that from the variational method. Results: On clinical point clouds, both the SR and MSR models have achieved sub-millimeter reconstruction accuracy and reduced the reconstruction time by two orders of magnitude to a subsecond reconstruction time. On point clouds with inconsistent occlusions, the MSR model has demonstrated its advantage in achieving consistent and robust performance despite the introduced

  9. Rapid, Time-Division Multiplexed, Direct Absorption- and Wavelength Modulation-Spectroscopy

    Directory of Open Access Journals (Sweden)

    Alexander Klein

    2014-11-01

    Full Text Available We present a tunable diode laser spectrometer with a novel, rapid time multiplexed direct absorption- and wavelength modulation-spectroscopy operation mode. The new technique allows enhancing the precision and dynamic range of a tunable diode laser absorption spectrometer without sacrificing accuracy. The spectroscopic technique combines the benefits of absolute concentration measurements using calibration-free direct tunable diode laser absorption spectroscopy (dTDLAS with the enhanced noise rejection of wavelength modulation spectroscopy (WMS. In this work we demonstrate for the first time a 125 Hz time division multiplexed (TDM-dTDLAS-WMS spectroscopic scheme by alternating the modulation of a DFB-laser between a triangle-ramp (dTDLAS and an additional 20 kHz sinusoidal modulation (WMS. The absolute concentration measurement via the dTDLAS-technique allows one to simultaneously calibrate the normalized 2f/1f-signal of the WMS-technique. A dTDLAS/WMS-spectrometer at 1.37 µm for H2O detection was built for experimental validation of the multiplexing scheme over a concentration range from 50 to 3000 ppmV (0.1 MPa, 293 K. A precision of 190 ppbV was achieved with an absorption length of 12.7 cm and an averaging time of two seconds. Our results show a five-fold improvement in precision over the entire concentration range and a significantly decreased averaging time of the spectrometer.

  10. Rapid, Time-Division Multiplexed, Direct Absorption- and Wavelength Modulation-Spectroscopy

    Science.gov (United States)

    Klein, Alexander; Witzel, Oliver; Ebert, Volker

    2014-01-01

    We present a tunable diode laser spectrometer with a novel, rapid time multiplexed direct absorption- and wavelength modulation-spectroscopy operation mode. The new technique allows enhancing the precision and dynamic range of a tunable diode laser absorption spectrometer without sacrificing accuracy. The spectroscopic technique combines the benefits of absolute concentration measurements using calibration-free direct tunable diode laser absorption spectroscopy (dTDLAS) with the enhanced noise rejection of wavelength modulation spectroscopy (WMS). In this work we demonstrate for the first time a 125 Hz time division multiplexed (TDM-dTDLAS-WMS) spectroscopic scheme by alternating the modulation of a DFB-laser between a triangle-ramp (dTDLAS) and an additional 20 kHz sinusoidal modulation (WMS). The absolute concentration measurement via the dTDLAS-technique allows one to simultaneously calibrate the normalized 2f/1f-signal of the WMS-technique. A dTDLAS/WMS-spectrometer at 1.37 μm for H2O detection was built for experimental validation of the multiplexing scheme over a concentration range from 50 to 3000 ppmV (0.1 MPa, 293 K). A precision of 190 ppbV was achieved with an absorption length of 12.7 cm and an averaging time of two seconds. Our results show a five-fold improvement in precision over the entire concentration range and a significantly decreased averaging time of the spectrometer. PMID:25405508

  11. Real-time microstructure imaging by Laue microdiffraction: A sample application in laser 3D printed Ni-based superalloys

    Science.gov (United States)

    Zhou, Guangni; Zhu, Wenxin; Shen, Hao; Li, Yao; Zhang, Anfeng; Tamura, Nobumichi; Chen, Kai

    2016-06-01

    Synchrotron-based Laue microdiffraction has been widely applied to characterize the local crystal structure, orientation, and defects of inhomogeneous polycrystalline solids by raster scanning them under a micro/nano focused polychromatic X-ray probe. In a typical experiment, a large number of Laue diffraction patterns are collected, requiring novel data reduction and analysis approaches, especially for researchers who do not have access to fast parallel computing capabilities. In this article, a novel approach is developed by plotting the distributions of the average recorded intensity and the average filtered intensity of the Laue patterns. Visualization of the characteristic microstructural features is realized in real time during data collection. As an example, this method is applied to image key features such as microcracks, carbides, heat affected zone, and dendrites in a laser assisted 3D printed Ni-based superalloy, at a speed much faster than data collection. Such analytical approach remains valid for a wide range of crystalline solids, and therefore extends the application range of the Laue microdiffraction technique to problems where real-time decision-making during experiment is crucial (for instance time-resolved non-reversible experiments).

  12. Medical applications of fast 3D cameras in real-time image-guided radiotherapy (IGRT) of cancer

    Science.gov (United States)

    Li, Shidong; Li, Tuotuo; Geng, Jason

    2013-03-01

    Dynamic volumetric medical imaging (4DMI) has reduced motion artifacts, increased early diagnosis of small mobile tumors, and improved target definition for treatment planning. High speed cameras for video, X-ray, or other forms of sequential imaging allow a live tracking of external or internal movement useful for real-time image-guided radiation therapy (IGRT). However, none of 4DMI can track real-time organ motion and no camera has correlated with 4DMI to show volumetric changes. With a brief review of various IGRT techniques, we propose a fast 3D camera for live-video stereovision, an automatic surface-motion identifier to classify body or respiratory motion, a mechanical model for synchronizing the external surface movement with the internal target displacement by combination use of the real-time stereovision and pre-treatment 4DMI, and dynamic multi-leaf collimation for adaptive aiming the moving target. Our preliminary results demonstrate that the technique is feasible and efficient in IGRT of mobile targets. A clinical trial has been initiated for validation of its spatial and temporal accuracies and dosimetric impact for intensity-modulated RT (IMRT), volumetric-modulated arc therapy (VMAT), and stereotactic body radiotherapy (SBRT) of any mobile tumors. The technique can be extended for surface-guided stereotactic needle insertion in biopsy of small lung nodules.

  13. DELTA 3D PRINTER

    OpenAIRE

    ȘOVĂILĂ Florin; ȘOVĂILĂ Claudiu; BAROIU Nicuşor

    2016-01-01

    3D printing is a very used process in industry, the generic name being “rapid prototyping”. The essential advantage of a 3D printer is that it allows the designers to produce a prototype in a very short time, which is tested and quickly remodeled, considerably reducing the required time to get from the prototype phase to the final product. At the same time, through this technique we can achieve components with very precise forms, complex pieces that, through classical methods, could have been...

  14. A Time-Multiplexed Track-Trigger for the CMS HL-LHC upgrade

    CERN Document Server

    Hall, Geoffrey

    2016-01-01

    A new CMS Tracker is under development for operation at the High Luminosity LHC from 2025. It includes an outer tracker based on special modules of two different types which will construct track stubs using spatially coincident clusters in two closely spaced sensor layers, to reject low transverse momentum track hits and reduce the data volume before data transmission to the Level-1 trigger. The tracker data will be used to reconstruct track segments in dedicated processors before onward transmission to other trigger processors which will combine tracker information with data originating from the calorimeter and muon detectors, to make the final L1 trigger decision. The architecture for processing the tracker data outside the detector is under study, using several alternative approaches. One attractive possibility is to exploit a Time Multiplexed design similar to the one which is currently being implemented in the CMS calorimeter trigger as part of the Phase I trigger upgrade. The novel Time Multiplexed Trig...

  15. Projection type transparent 3D display using active screen

    Science.gov (United States)

    Kamoshita, Hiroki; Yendo, Tomohiro

    2015-05-01

    Equipment to enjoy a 3D image, such as a movie theater, television and so on have been developed many. So 3D video are widely known as a familiar image of technology now. The display representing the 3D image are there such as eyewear, naked-eye, the HMD-type, etc. They has been used for different applications and location. But have not been widely studied for the transparent 3D display. If transparent large 3D display is realized, it is useful to display 3D image overlaid on real scene in some applications such as road sign, shop window, screen in the conference room etc. As a previous study, to produce a transparent 3D display by using a special transparent screen and number of projectors is proposed. However, for smooth motion parallax, many projectors are required. In this paper, we propose a display that has transparency and large display area by time multiplexing projection image in time-division from one or small number of projectors to active screen. The active screen is composed of a number of vertically-long small rotate mirrors. It is possible to realize the stereoscopic viewing by changing the image of the projector in synchronism with the scanning of the beam.3D vision can be realized by light is scanned. Also, the display has transparency, because it is possible to see through the display when the mirror becomes perpendicular to the viewer. We confirmed the validity of the proposed method by using simulation.

  16. An Improved Model Predictive Current Controller of Switched Reluctance Machines Using Time-Multiplexed Current Sensor.

    Science.gov (United States)

    Li, Bingchu; Ling, Xiao; Huang, Yixiang; Gong, Liang; Liu, Chengliang

    2017-05-17

    This paper presents a fixed-switching-frequency model predictive current controller using multiplexed current sensor for switched reluctance machine (SRM) drives. The converter was modified to distinguish currents from simultaneously excited phases during the sampling period. The only current sensor installed in the converter was time division multiplexing for phase current sampling. During the commutation stage, the control steps of adjacent phases were shifted so that sampling time was staggered. The maximum and minimum duty ratio of pulse width modulation (PWM) was limited to keep enough sampling time for analog-to-digital (A/D) conversion. Current sensor multiplexing was realized without complex adjustment of either driver circuit nor control algorithms, while it helps to reduce the cost and errors introduced in current sampling due to inconsistency between sensors. The proposed controller is validated by both simulation and experimental results with a 1.5 kW three-phase 12/8 SRM. Satisfied current sampling is received with little difference compared with independent phase current sensors for each phase. The proposed controller tracks the reference current profile as accurately as the model predictive current controller with independent phase current sensors, while having minor tracking errors compared with a hysteresis current controller.

  17. Regional Gastrointestinal Transit Times in Patients With Carcinoid Diarrhea: Assessment With the Novel 3D-Transit System

    DEFF Research Database (Denmark)

    Gregersen, Tine; Haase, Anne-Mette; Schlageter, Vincent

    2015-01-01

    BACKGROUND/AIMS: The paucity of knowledge regarding gastrointestinal motility in patients with neuroendocrine tumors and carcinoid diarrhea re-stricts targeted treatment. 3D-Transit is a novel, minimally invasive, ambulatory method for description of gastrointestinal motility. The system has...... and seven patients with neuroendocrine tumor and at least 3 bowel movements per day were inves-tigated with 3D-Transit and standard radiopaque markers. RESULTS: Total GITT assessed with 3D-Transit and radiopaque markers were well correlated (Spearman's rho = 0.64, P = 0.002). Median total GITT was 12...

  18. MERRA 3D IAU Tendency, Wind Components, Time average 3-hourly (1.25x1.25L42) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3CPUDT or tavg3_3d_udt_Cp data product is the MERRA Data Assimilation System 3-Dimensional eastward wind tendencies that is time averaged on pressure levels...

  19. MERRA 3D IAU Diagnostic, Turbulence, Time average 3-hourly (1.25x1.25L42) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3CPTRB or tavg3_3d_trb_Cp data product is the MERRA Data Assimilation System 3-Dimensional turbulence diagnostic that is time averaged on pressure levels at a...

  20. MERRA 3D IAU Diagnostic, Cloud Properties, Time average 3-hourly (1.25x1.25L42) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3CPCLD or tavg3_3d_cld_Cp data product is the MERRA Data Assimilation System 3-Dimensional cloud diagnostic that is time averaged on pressure levels at a...

  1. MERRA 3D IAU Diagnostic, Moist Physics, Time average 3-hourly (1.25x1.25L42) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3CPMST or tavg3_3d_mst_Cp data product is the MERRA Data Assimilation System 3-Dimensional moist process diagnostic that is time averaged on pressure levels...

  2. MERRA 3D IAU Diagnostic, Radiation, Time average 3-hourly (1.25x1.25L42) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3CPRAD or tavg3_3d_rad_Cp data product is the MERRA Data Assimilation System 3-Dimensional radiation diagnostic that is time averaged on pressure levels at a...

  3. MERRA 3D IAU Tendency, Temperature, Time average 3-hourly (1.25x1.25L42) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3CPTDT or tavg3_3d_tdt_Cp data product is the MERRA Data Assimilation System 3-Dimensional temperature tendencies that is time averaged on pressure levels at...

  4. MERRA 3D IAU Tendency, Specific Humidity, Time average 3-hourly (1.25x1.25L42) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3CPQDT or tavg3_3d_qdt_Cp data product is the MERRA Data Assimilation System 3-Dimensional moisture tendencies that is time averaged on pressure levels at a...

  5. MERRA 3D IAU Tendency, Ozone, Time average 3-hourly (1.25x1.25L42) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3CPODT or tavg3_3d_odt_Cp data product is the MERRA Data Assimilation System 3-Dimensional ozone tendencies that is time averaged on pressure levels at a...

  6. 3D visualization reduces operating time when compared to high-definition 2D in laparoscopic liver resection: a case-matched study.

    Science.gov (United States)

    Velayutham, Vimalraj; Fuks, David; Nomi, Takeo; Kawaguchi, Yoshikuni; Gayet, Brice

    2016-01-01

    To evaluate the effect of three-dimensional (3D) visualization on operative performance during elective laparoscopic liver resection (LLR). Major limitations of conventional laparoscopy are lack of depth perception and tactile feedback. Introduction of robotic technology, which employs 3D imaging, has removed only one of these technical obstacles. Despite the significant advantages claimed, 3D systems have not been widely accepted. In this single institutional study, 20 patients undergoing LLR by high-definition 3D laparoscope between April 2014 and August 2014 were matched to a retrospective control group of patients who underwent LLR by two-dimensional (2D) laparoscope. The number of patients who underwent major liver resection was 5 (25%) in the 3D group and 10 (25%) in the 2D group. There was no significant difference in contralateral wedge resection or combined resections between the 3D and 2D groups. There was no difference in the proportion of patients undergoing previous abdominal surgery (70 vs. 77%, p = 0.523) or previous hepatectomy (20 vs. 27.5%, p = 0.75). The operative time was significantly shorter in the 3D group when compared to 2D (225 ± 109 vs. 284 ± 71 min, p = 0.03). There was no significant difference in blood loss in the 3D group when compared to 2D group (204 ± 226 in 3D vs. 252 ± 349 ml in 2D group, p = 0.291). The major complication rates were similar, 5% (1/20) and 7.5% (3/40), respectively, (p ≥ 0.99). 3D visualization may reduce the operating time compared to high-definition 2D. Further large studies, preferably prospective randomized control trials are required to confirm this.

  7. Time-dependent hydrogen ionisation in 3D simulations of the solar chromosphere. Methods and first results

    Science.gov (United States)

    Leenaarts, J.; Wedemeyer-Böhm, S.

    2006-12-01

    Context: .The hydrogen ionisation degree deviates substantially from statistical equilibrium under the conditions of the solar chromosphere. A realistic description of this atmospheric layer thus must account for time-dependent non-equilibrium effects. Aims: .Advancing the realism of numerical simulations of the solar chromosphere by improved numerical treatment of the relevant physics will provide more realistic models that are essential for interpretation of existing and future observations. Methods: .An approximate method for solving the rate equations for the hydrogen populations was extended and implemented in the three-dimensional radiation (magneto-)hydrodynamics code CO^5BOLD. The method is based on a model atom with six energy levels and fixed radiative rates. It has been tested extensively in one-dimensional simulations. The extended method has been used to create a three-dimensional model that extends from the upper convection zone to the chromosphere. Results: .The ionisation degree of hydrogen in our time-dependent simulation is comparable to the corresponding equilibrium value up to 500 km above optical depth unity. Above this height, the non-equilibrium ionisation degree is fairly constant over time and space, and tends to be at a value set by hot propagating shock waves. The hydrogen level populations and electron density are much more constant than the corresponding values for statistical equilibrium, too. In contrast, the equilibrium ionisation degree varies by more than 20 orders of magnitude between hot, shocked regions and cool, non-shocked regions. Conclusions: .The simulation shows for the first time in 3D that the chromospheric hydrogen ionisation degree and electron density cannot be calculated in equilibrium. Our simulation can provide realistic values of those quantities for detailed radiative transfer computations.

  8. Architecture of web services in the enhancement of real-time 3D video virtualization in cloud environment

    Science.gov (United States)

    Bada, Adedayo; Wang, Qi; Alcaraz-Calero, Jose M.; Grecos, Christos

    2016-04-01

    This paper proposes a new approach to improving the application of 3D video rendering and streaming by jointly exploring and optimizing both cloud-based virtualization and web-based delivery. The proposed web service architecture firstly establishes a software virtualization layer based on QEMU (Quick Emulator), an open-source virtualization software that has been able to virtualize system components except for 3D rendering, which is still in its infancy. The architecture then explores the cloud environment to boost the speed of the rendering at the QEMU software virtualization layer. The capabilities and inherent limitations of Virgil 3D, which is one of the most advanced 3D virtual Graphics Processing Unit (GPU) available, are analyzed through benchmarking experiments and integrated into the architecture to further speed up the rendering. Experimental results are reported and analyzed to demonstrate the benefits of the proposed approach.

  9. Toroidal Ampere-Faraday Equations Solved Simultaneously with CQL3D Fokker-Planck Time-Evolution

    Science.gov (United States)

    Harvey, R. W. (Bob); Petrov, Yu. V. (Yuri); Forest, C. B.; La Haye, R. J.

    2017-10-01

    A self-consistent, time-dependent toroidal electric field calculation is a key feature of a complete 3D Fokker-Planck kinetic distribution radial transport code for f(v,theta,rho,t). We discuss benchmarking and first applications of an implementation of the Ampere-Faraday equation for the self-consistent toroidal electric field, as applied to (1) resistive turn on of applied electron cyclotron current in the DIII-D tokamak giving initial back current adjacent to the direct CD region and having possible NTM stabilization implications, and (2) runaway electron production in tokamaks due to rapid reduction of the plasma temperature as occurs in pellet injection, massive gas injection, or a plasma disruption. Our previous results assuming a constant current density (Lenz' Law) model showed that prompt ``hot-tail runaways'' dominated ``knock-on'' and Dreicer ``drizzle'' runaways; we perform full-radius modeling and examine modifications due to the more complete Ampere-Faraday solution. Presently, the implementation relies on a fixed shape eqdsk, and this limitation will be addressed in future work. Research supported by USDOE FES award ER54744.

  10. A Real-Time Magnetoencephalography Brain-Computer Interface Using Interactive 3D Visualization and the Hadoop Ecosystem.

    Science.gov (United States)

    McClay, Wilbert A; Yadav, Nancy; Ozbek, Yusuf; Haas, Andy; Attias, Hagaii T; Nagarajan, Srikantan S

    2015-09-30

    Ecumenically, the fastest growing segment of Big Data is human biology-related data and the annual data creation is on the order of zetabytes. The implications are global across industries, of which the treatment of brain related illnesses and trauma could see the most significant and immediate effects. The next generation of health care IT and sensory devices are acquiring and storing massive amounts of patient related data. An innovative Brain-Computer Interface (BCI) for interactive 3D visualization is presented utilizing the Hadoop Ecosystem for data analysis and storage. The BCI is an implementation of Bayesian factor analysis algorithms that can distinguish distinct thought actions using magneto encephalographic (MEG) brain signals. We have collected data on five subjects yielding 90% positive performance in MEG mid- and post-movement activity. We describe a driver that substitutes the actions of the BCI as mouse button presses for real-time use in visual simulations. This process has been added into a flight visualization demonstration. By thinking left or right, the user experiences the aircraft turning in the chosen direction. The driver components of the BCI can be compiled into any software and substitute a user's intent for specific keyboard strikes or mouse button presses. The BCI's data analytics OPEN ACCESS Brain. Sci. 2015, 5 420 of a subject's MEG brainwaves and flight visualization performance are stored and analyzed using the Hadoop Ecosystem as a quick retrieval data warehouse.

  11. A Real-Time Magnetoencephalography Brain-Computer Interface Using Interactive 3D Visualization and the Hadoop Ecosystem

    Directory of Open Access Journals (Sweden)

    Wilbert A. McClay

    2015-09-01

    Full Text Available Ecumenically, the fastest growing segment of Big Data is human biology-related data and the annual data creation is on the order of zetabytes. The implications are global across industries, of which the treatment of brain related illnesses and trauma could see the most significant and immediate effects. The next generation of health care IT and sensory devices are acquiring and storing massive amounts of patient related data. An innovative Brain-Computer Interface (BCI for interactive 3D visualization is presented utilizing the Hadoop Ecosystem for data analysis and storage. The BCI is an implementation of Bayesian factor analysis algorithms that can distinguish distinct thought actions using magneto encephalographic (MEG brain signals. We have collected data on five subjects yielding 90% positive performance in MEG mid- and post-movement activity. We describe a driver that substitutes the actions of the BCI as mouse button presses for real-time use in visual simulations. This process has been added into a flight visualization demonstration. By thinking left or right, the user experiences the aircraft turning in the chosen direction. The driver components of the BCI can be compiled into any software and substitute a user’s intent for specific keyboard strikes or mouse button presses. The BCI’s data analytics OPEN ACCESS Brain. Sci. 2015, 5 420 of a subject’s MEG brainwaves and flight visualization performance are stored and analyzed using the Hadoop Ecosystem as a quick retrieval data warehouse.

  12. Short and long time effects of low temperature Plasma Activated Media on 3D multicellular tumor spheroids

    Science.gov (United States)

    Judée, Florian; Fongia, Céline; Ducommun, Bernard; Yousfi, Mohammed; Lobjois, Valérie; Merbahi, Nofel

    2016-02-01

    This work investigates the regionalized antiproliferative effects of plasma-activated medium (PAM) on colon adenocarcinoma multicellular tumor spheroid (MCTS), a model that mimics 3D organization and regionalization of a microtumor region. PAM was generated by dielectric barrier plasma jet setup crossed by helium carrier gas. MCTS were transferred in PAM at various times after plasma exposure up to 48 hours and effect on MCTS growth and DNA damage were evaluated. We report the impact of plasma exposure duration and delay before transfer on MCTS growth and DNA damage. Local accumulation of DNA damage revealed by histone H2AX phosphorylation is observed on outermost layers and is dependent on plasma exposure. DNA damage is completely reverted by catalase addition indicating that H2O2 plays major role in observed genotoxic effect while growth inhibitory effect is maintained suggesting that it is due to others reactive species. SOD and D-mannitol scavengers also reduced DNA damage by 30% indicating that and OH* are involved in H2O2 formation. Finally, PAM is able to retain its cytotoxic and genotoxic activity upon storage at +4 °C or -80 °C. These results suggest that plasma activated media may be a promising new antitumor strategy for colorectal cancer tumors.

  13. A workflow to process 3D+time microscopy images of developing organisms and reconstruct their cell lineage

    Science.gov (United States)

    Faure, Emmanuel; Savy, Thierry; Rizzi, Barbara; Melani, Camilo; Stašová, Olga; Fabrèges, Dimitri; Špir, Róbert; Hammons, Mark; Čúnderlík, Róbert; Recher, Gaëlle; Lombardot, Benoît; Duloquin, Louise; Colin, Ingrid; Kollár, Jozef; Desnoulez, Sophie; Affaticati, Pierre; Maury, Benoît; Boyreau, Adeline; Nief, Jean-Yves; Calvat, Pascal; Vernier, Philippe; Frain, Monique; Lutfalla, Georges; Kergosien, Yannick; Suret, Pierre; Remešíková, Mariana; Doursat, René; Sarti, Alessandro; Mikula, Karol; Peyriéras, Nadine; Bourgine, Paul

    2016-01-01

    The quantitative and systematic analysis of embryonic cell dynamics from in vivo 3D+time image data sets is a major challenge at the forefront of developmental biology. Despite recent breakthroughs in the microscopy imaging of living systems, producing an accurate cell lineage tree for any developing organism remains a difficult task. We present here the BioEmergences workflow integrating all reconstruction steps from image acquisition and processing to the interactive visualization of reconstructed data. Original mathematical methods and algorithms underlie image filtering, nucleus centre detection, nucleus and membrane segmentation, and cell tracking. They are demonstrated on zebrafish, ascidian and sea urchin embryos with stained nuclei and membranes. Subsequent validation and annotations are carried out using Mov-IT, a custom-made graphical interface. Compared with eight other software tools, our workflow achieved the best lineage score. Delivered in standalone or web service mode, BioEmergences and Mov-IT offer a unique set of tools for in silico experimental embryology. PMID:26912388

  14. VR-Planets : a 3D immersive application for real-time flythrough images of planetary surfaces

    Science.gov (United States)

    Civet, François; Le Mouélic, Stéphane

    2015-04-01

    During the last two decades, a fleet of planetary probes has acquired several hundred gigabytes of images of planetary surfaces. Mars has been particularly well covered thanks to the Mars Global Surveyor, Mars Express and Mars Reconnaissance Orbiter spacecrafts. HRSC, CTX, HiRISE instruments allowed the computation of Digital Elevation Models with a resolution from hundreds of meters up to 1 meter per pixel, and corresponding orthoimages with a resolution from few hundred of meters up to 25 centimeters per pixel. The integration of such huge data sets into a system allowing user-friendly manipulation either for scientific investigation or for public outreach can represent a real challenge. We are investigating how innovative tools can be used to freely fly over reconstructed landscapes in real time, using technologies derived from the game industry and virtual reality. We have developed an application based on a game engine, using planetary data, to immerse users in real martian landscapes. The user can freely navigate in each scene at full spatial resolution using a game controller. The actual rendering is compatible with several visualization devices such as 3D active screen, virtual reality headsets (Oculus Rift), and android devices.

  15. Time-lapse two-color 3D imaging of live cells with doubled resolution using structured illumination.

    Science.gov (United States)

    Fiolka, Reto; Shao, Lin; Rego, E Hesper; Davidson, Michael W; Gustafsson, Mats G L

    2012-04-03

    Previous implementations of structured-illumination microscopy (SIM) were slow or designed for one-color excitation, sacrificing two unique and extremely beneficial aspects of light microscopy: live-cell imaging in multiple colors. This is especially unfortunate because, among the resolution-extending techniques, SIM is an attractive choice for live-cell imaging; it requires no special fluorophores or high light intensities to achieve twice diffraction-limited resolution in three dimensions. Furthermore, its wide-field nature makes it light-efficient and decouples the acquisition speed from the size of the lateral field of view, meaning that high frame rates over large volumes are possible. Here, we report a previously undescribed SIM setup that is fast enough to record 3D two-color datasets of living whole cells. Using rapidly programmable liquid crystal devices and a flexible 2D grid pattern algorithm to switch between excitation wavelengths quickly, we show volume rates as high as 4 s in one color and 8.5 s in two colors over tens of time points. To demonstrate the capabilities of our microscope, we image a variety of biological structures, including mitochondria, clathrin-coated vesicles, and the actin cytoskeleton, in either HeLa cells or cultured neurons.

  16. 3D Preoperative Planning in the ER with OsiriX®: When There is No Time for Neuronavigation

    Science.gov (United States)

    Mandel, Mauricio; Amorim, Robson; Paiva, Wellingson; Prudente, Marcelo; Teixeira, Manoel Jacobsen; de Andrade, Almir Ferreira

    2013-01-01

    The evaluation of patients in the emergency room department (ER) through more accurate imaging methods such as computed tomography (CT) has revolutionized their assistance in the early 80s. However, despite technical improvements seen during the last decade, surgical planning in the ER has not followed the development of image acquisition methods. The authors present their experience with DICOM image processing as a navigation method in the ER. The authors present 18 patients treated in the Emergency Department of the Hospital das Clínicas of the University of Sao Paulo. All patients were submitted to volumetric CT. We present patients with epidural hematomas, acute/subacute subdural hematomas and contusional hematomas. Using a specific program to analyze images in DICOM format (OsiriX®), the authors performed the appropriate surgical planning. The use of 3D surgical planning made it possible to perform procedures more accurately and less invasively, enabling better postoperative outcomes. All sorts of neurosurgical emergency pathologies can be treated appropriately with no waste of time. The three-dimensional processing of images in the preoperative evaluation is easy and possible even within the emergency care. It should be used as a tool to reduce the surgical trauma and it may dispense methods of navigation in many cases. PMID:23681091

  17. Exploration of the potential of liquid scintillators for real-time 3D dosimetry of intensity modulated proton beams.

    Science.gov (United States)

    Beddar, Sam; Archambault, Louis; Sahoo, Narayan; Poenisch, Falk; Chen, George T; Gillin, Michael T; Mohan, Radhe

    2009-05-01

    In this study, the authors investigated the feasibility of using a 3D liquid scintillator (LS) detector system for the verification and characterization of proton beams in real time for intensity and energy-modulated proton therapy. A plastic tank filled with liquid scintillator was irradiated with pristine proton Bragg peaks. Scintillation light produced during the irradiation was measured with a CCD camera. Acquisition rates of 20 and 10 frames per second (fps) were used to image consecutive frame sequences. These measurements were then compared to ion chamber measurements and Monte Carlo simulations. The light distribution measured from the images acquired at rates of 20 and 10 fps have standard deviations of 1.1% and 0.7%, respectively, in the plateau region of the Bragg curve. Differences were seen between the raw LS signal and the ion chamber due to the quenching effects of the LS and due to the optical properties of the imaging system. The authors showed that this effect can be accounted for and corrected by Monte Carlo simulations. The liquid scintillator detector system has a good potential for performing fast proton beam verification and characterization.

  18. 3D Preoperative Planning in the ER with OsiriX®: When There is No Time for Neuronavigation

    Directory of Open Access Journals (Sweden)

    Almir Ferreira de Andrade

    2013-05-01

    Full Text Available The evaluation of patients in the emergency room department (ER through more accurate imaging methods such as computed tomography (CT has revolutionized their assistance in the early 80s. However, despite technical improvements seen during the last decade, surgical planning in the ER has not followed the development of image acquisition methods. The authors present their experience with DICOM image processing as a navigation method in the ER. The authors present 18 patients treated in the Emergency Department of the Hospital das Clínicas of the University of Sao Paulo. All patients were submitted to volumetric CT. We present patients with epidural hematomas, acute/subacute subdural hematomas and contusional hematomas. Using a specific program to analyze images in DICOM format (OsiriX®, the authors performed the appropriate surgical planning. The use of 3D surgical planning made it possible to perform procedures more accurately and less invasively, enabling better postoperative outcomes. All sorts of neurosurgical emergency pathologies can be treated appropriately with no waste of time. The three-dimensional processing of images in the preoperative evaluation is easy and possible even within the emergency care. It should be used as a tool to reduce the surgical trauma and it may dispense methods of navigation in many cases.

  19. 3D Non-destructive Imaging of Punctures in Polyethylene Composite Armor by THz Time Domain Spectroscopy

    Science.gov (United States)

    Palka, N.; Panowicz, R.; Ospald, F.; Beigang, R.

    2015-08-01

    An ultra-high molecular weight polyethylene composite sample totally punctured by a projectile was examined by THz TDS raster scanning method in reflection configuration. The scanning results correctly match the distribution of delaminations inside the sample, which was proven with cross-sectional and frontal views after waterjet cutting. For further analysis, a signal-processing algorithm based on the deconvolution method was developed and the modified reference signal was used to reduce disturbances. The complex refractive index of the sample was determined by transmission TDS technique and was later used for the simulation of pulse propagation by the finite difference time domain method. These simulations verified the correctness of the proposed method and showed its constraints. Using the proposed algorithm, the ambiguous raw THz image was converted into a binary 3D image of the sample, which consists only of two areas: sample—polyethylene and delamination—air. As a result, a clear image of the distribution of delaminations with their spatial extent was obtained which can be used for further comparative analysis. The limitation of the proposed method is that parts of the central area of the puncture cannot be analyzed because tilted layers deflect the incident signal.

  20. The Future Is 3D

    Science.gov (United States)

    Carter, Luke

    2015-01-01

    3D printers are a way of producing a 3D model of an item from a digital file. The model builds up in successive layers of material placed by the printer controlled by the information in the computer file. In this article the author argues that 3D printers are one of the greatest technological advances of recent times. He discusses practical uses…

  1. Development of multiplex real-time PCR assay for the detection of Brucella spp., Leptospira spp. and Campylobacter foetus.

    Science.gov (United States)

    Selim, Abdelfattah M; Elhaig, Mahmoud M; Gaede, Wolfgang

    2014-12-29

    Abortion among dairy cattle is one of the major causes of economic losses in the livestock industry. This study describes a 1-step multiplex real-time polymerase chain reaction (PCR) to detect Brucella spp., Leptospira spp. and Campylobacter foetus, these are significant bacteria commonly implicated in bovine abortion. ß-actin was added to the same PCR reaction as an internal control to detect any extraction failure or PCR inhibition. The detection limit of multiplex real-time PCR using purified DNA from cultured organisms was set to 5 fg for Leptospira spp. and C. foetus and to 50 fg for Brucella spp. The multiplex real-time PCR did not produce any non-specific amplification when tested with different strains of the 3 pathogens. This multiplex real-time PCR provides a valuable tool for diagnosis, simultaneous and rapid detection for the 3 pathogens causing abortion in bovine.

  2. Development of multiplex real-time PCR assay for the detection of Brucella spp., Leptospira spp. and Campylobacter foetus

    Directory of Open Access Journals (Sweden)

    Abdelfattah M. Selim

    2014-12-01

    Full Text Available Abortion among dairy cattle is one of the major causes of economic losses in the livestock industry. This study describes a 1-step multiplex real-time polymerase chain reaction (PCR to detect Brucella spp., Leptospira spp. and Campylobacter foetus, these are significant bacteria commonly implicated in bovine abortion. ß-actin was added to the same PCR reaction as an internal control to detect any extraction failure or PCR inhibition. The detection limit of multiplex real-time PCR using purified DNA from cultured organisms was set to 5 fg for Leptospira spp. and C. foetus and to 50 fg for Brucella spp. The multiplex real-time PCR did not produce any non-specific amplification when tested with different strains of the 3 pathogens. This multiplex real-time PCR provides a valuable tool for diagnosis, simultaneous and rapid detection for the 3 pathogens causing abortion in bovine.

  3. 3-D ion distribution and evolution in storm-time RC Retrieved from TWINS ENA by differential voxel CT technique

    Science.gov (United States)

    Ma, S.; Yan, W.; Xu, L.

    2013-12-01

    The quantitative retrieval of the 3-D spatial distribution of the parent energetic ions of ENA from a 2-D ENA image is a quite challenge task. The Two Wide-angle Imaging Neutral-atom Spectrometers (TWINS) mission of NASA is the first constellation to perform stereoscopic magnetospheric imaging of energetic neutral atoms (ENA) from a pair of spacecraft flying on two widely-separated Molniya orbits. TWINS provides a unique opportunity to retrieve the 3-D distribution of ions in the ring current (RC) by using a volumetric pixel (voxel) CT inversion method. In this study the voxel CT method is implemented for a series of differential ENA fluxes averaged over about 6 to 7 sweeps (corresponding to a time period of about 9 min.) at different energy levels ranging from 5 to 100 keV, obtained simultaneously by the two satellites during the main phase of a great magnetic storm with minimum Sym-H of -156 nT on 24-25 October 2011. The data were selected to span a period about 50 minutes during which a large substorm was undergoing its expansion phase first and then recovery. The ENA species of O and H are distinguished for some time-segments by analyzing the signals of pulse heights of second electrons emitted from the carbon foil and impacted on the MCP detector in the TWINS sensors. In order to eliminate the possible influence on retrieval induced by instrument bias error, a differential voxel CT technique is applied. The flux intensity of the ENAs' parent ions in the RC has been obtained as a function of energy, L value, MLT sector and latitude, along with their time evolution during the storm-time substorm expansion phase. Forward calculations proved the reliability of the retrieved results. It shows that the RC is highly asymmetric, with a major concentration in the midnight to dawn sector for equatorial latitudes. Halfway through the substorm expansion there occurred a large enhancement of equatorial ion flux at lower energy (5 keV) in the dusk sector, with narrow extent

  4. 3-D time-domain induced polarization tomography: a new approach based on a source current density formulation

    Science.gov (United States)

    Soueid Ahmed, A.; Revil, A.

    2018-04-01

    Induced polarization (IP) of porous rocks can be associated with a secondary source current density, which is proportional to both the intrinsic chargeability and the primary (applied) current density. This gives the possibility of reformulating the time domain induced polarization (TDIP) problem as a time-dependent self-potential-type problem. This new approach implies a change of strategy regarding data acquisition and inversion, allowing major time savings for both. For inverting TDIP data, we first retrieve the electrical resistivity distribution. Then, we use this electrical resistivity distribution to reconstruct the primary current density during the injection/retrieval of the (primary) current between the current electrodes A and B. The time-lapse secondary source current density distribution is determined given the primary source current density and a distribution of chargeability (forward modelling step). The inverse problem is linear between the secondary voltages (measured at all the electrodes) and the computed secondary source current density. A kernel matrix relating the secondary observed voltages data to the source current density model is computed once (using the electrical conductivity distribution), and then used throughout the inversion process. This recovered source current density model is in turn used to estimate the time-dependent chargeability (normalized voltages) in each cell of the domain of interest. Assuming a Cole-Cole model for simplicity, we can reconstruct the 3-D distributions of the relaxation time τ and the Cole-Cole exponent c by fitting the intrinsic chargeability decay curve to a Cole-Cole relaxation model for each cell. Two simple cases are studied in details to explain this new approach. In the first case, we estimate the Cole-Cole parameters as well as the source current density field from a synthetic TDIP data set. Our approach is successfully able to reveal the presence of the anomaly and to invert its Cole

  5. 3D full-waveform inversion of time-lapse horizontal borehole GPR data to map soil water content variability

    Science.gov (United States)

    Klotzsche, A.; Van Der Kruk, J.; Oberroehrmann, M.; Vanderborght, J.; Vereecken, H.

    2015-12-01

    Soil moisture is a key state variable that controls water and mass fluxes in soil-plant systems and is variable in space and time. Over the last year's, hydrogeophysical methods such as ground penetrating radar (GPR) have been used to determine electromagnetic properties as proxies for soil water content (SWC). Here, we combined zero-offset-profiles (ZOP) GPR measurements within multiple horizontal minirhizotubes at different depths to determine the spatial and temporal variability of SWC under a winter wheat stand at the Selhausen test site (Germany). We studied spatio-temporal variations of SWC under three different treatments: rainfed, irrigated and sheltered. We acquired 15 time-lapse ZOP GPR dataset during the growing season of the wheat in the rhizotron facility using horizontal boreholes with a separation of 0.75m and a length of 6m at six depths between 0.1-1.2m. The obtained radar velocities were converted to SWC using the 4-phase volumetric complex refractive index model. SWC values obtained using standard ray-based processing methods were not reliable close to the surface (0.1-0.2m depth) because of the inference of the critically refracted air wave and the direct wave through the subsurface. Therefore, we implemented a full-waveform inversion that uses accurate 3D forward modeling of GPRMax that incorporates the air and soil interactions. The shuffled complex evolution (SCE) method allowed us to retrieve quantitative medium properties that explained the measured data with a R² of at least 0.95, and improved SWC estimates at all depths. The final SWC distributions for wet and dry conditions showed that the vertical variability is significantly larger than the lateral variability caused by strong influence of precipitation and irrigation events.

  6. Herramientas SIG 3D

    Directory of Open Access Journals (Sweden)

    Francisco R. Feito Higueruela

    2010-04-01

    Full Text Available Applications of Geographical Information Systems on several Archeology fields have been increasing during the last years. Recent avances in these technologies make possible to work with more realistic 3D models. In this paper we introduce a new paradigm for this system, the GIS Thetrahedron, in which we define the fundamental elements of GIS, in order to provide a better understanding of their capabilities. At the same time the basic 3D characteristics of some comercial and open source software are described, as well as the application to some samples on archeological researchs

  7. An optimization algorithm for 3D real-time lung tumor tracking during arc therapy using kV projection images.

    Science.gov (United States)

    Zhuang, Ling; Liang, Jian; Yan, Di; Zhang, Tiezhi; Marina, Ovidiu; Ionascu, Dan

    2013-10-01

    To develop a real-time markerless 3D tumor tracking using kilovoltage (kV) cone-beam CT (CBCT) projection images during volumetric modulated arc therapy (VMAT) treatment of lung tumors. The authors have developed a method to identify the position of lung tumors during VMAT treatment, where the current mean 3D position is detected and subsequently the real time 3D position is obtained. The mean position is evaluated by iteratively minimizing an observation error function between the tumor coordinate detected in the imaging plane and the coordinate of the corresponding projection of the estimated mean position. The 3D trajectory is reconstructed using the same optimization formalism, where an observation error function is minimized for tumor positions confined within a predefined amplitude bin as determined from the superior-inferior tumor motion. Dynamic phantom experiments were performed and image data acquired during patient treatment were analyzed to characterize the reconstruction ability of the proposed method. The proposed algorithm needs to acquire kV projection data until a certain gantry angle is passed through, termed the black-out angle, before accurate estimation mean 3D tumor position is possible. The black-out angle for the mean position method is approximately 20°, while for the 3D trajectory reconstruction an additional ≈ 15° is required. The mean 3D position and 3D trajectory reconstruction are accurate within ± 0.5 mm. The authors present a real-time tracking framework to locate lung tumors during VMAT treatment using an optimization algorithm applied to CBCT kV projection images taken concomitantly with the treatment delivery. The authors' technique does not introduce significant additional dose and can be used for real-time treatment monitoring.

  8. Real-time 3D shape measurement with digital stripe projection by Texas Instruments Micro Mirror Devices DMD

    Science.gov (United States)

    Frankowski, Gottfried; Chen, Mai; Huth, Torsten

    2000-03-01

    The fast, contact-free and highly precise shape measurement of technical objects is of key importance in the scientific- technological area as well as the area of practical measurement technology. The application areas of contact- free surface measurement extend across widely different areas, e.g., the automation of production processes, the measurement and inspection of components in microsystem technology or the fast 3D in-vivo measurement of human skin surfaces in cosmetics and medical technology. This paper describes methodological and technological possibilities as well as measurement technology applications for fast optical 3D shape measurements using micromirror-based high-velocity stripe projection. Depending on the available projector and camera facilities, it will be possible to shoot and evaluate compete 3D surface profiles within only a few milliseconds.

  9. tavg3_3d_chm_Nv: MERRA Chem 3D IAU C-Grid Edge Mass Flux, Time Average 3-Hourly 1.25 x 1.25 degree V5.2.0 (MAT3NVCHM) at GES DISC

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3NVCHM or tavg3_3d_chm_Nv data product is the MERRA Data Assimilation System Chemistry 3-Dimensional chemistry on layers that is time averaged, 3D model...

  10. Wakefield Simulation of CLIC PETS Structure Using Parallel 3D Finite Element Time-Domain Solver T3P

    CERN Document Server

    Candel, A; Lee, L; Li, Z; Ng, C; Schussman, G; Ko, K; Syratchev, I

    2010-01-01

    In re­cent years, SLAC's Ad­vanced Com­pu­ta­tions De­part­ment (ACD) has de­vel­oped the par­al­lel 3D Fi­nite El­e­ment elec­tro­mag­net­ic time-do­main code T3P. High­er-or­der Fi­nite El­e­ment meth­ods on con­for­mal un­struc­tured mesh­es and mas­sive­ly par­al­lel pro­cess­ing allow un­prece­dent­ed sim­u­la­tion ac­cu­ra­cy for wake­field com­pu­ta­tions and sim­u­la­tions of tran­sient ef­fects in re­al­is­tic ac­cel­er­a­tor struc­tures. Ap­pli­ca­tions in­clude sim­u­la­tion of wake­field damp­ing in the Com­pact Lin­ear Col­lid­er (CLIC) Power Ex­trac­tion and Trans­fer Struc­ture (PETS).

  11. Wavelength- and Time-Selective Reconfigurable Optical Add/Drop Multiplexer Using Time-Frequency Domain Processing

    Directory of Open Access Journals (Sweden)

    Konishi Tsuyoshi

    2010-01-01

    Full Text Available We propose and demonstrate a wavelength- and time-selective reconfigurable optical add/drop multiplexer (ROADM using time-frequency domain processing. The proposed ROADM is realized by allocating wavelength channels and time slots to corresponding 2D spatial channels on a MEMS optical switch. Experimental results show the wavelength- and time-selective drop operation for a signal with equivalent 3.2 Tb/s (0.64  channels, and the reconfigurability by the switching operation of the MEMS optical switch.

  12. Wavelength- and Time-Selective Reconfigurable Optical Add/Drop Multiplexer Using Time-Frequency Domain Processing

    Directory of Open Access Journals (Sweden)

    Tsuyoshi Konishi

    2010-01-01

    Full Text Available We propose and demonstrate a wavelength- and time-selective reconfigurable optical add/drop multiplexer (ROADM using time-frequency domain processing. The proposed ROADM is realized by allocating wavelength channels and time slots to corresponding 2D spatial channels on a MEMS optical switch. Experimental results show the wavelength- and time-selective drop operation for a signal with equivalent 3.2 Tb/s (0.64 Tb/s×5 channels, and the reconfigurability by the switching operation of the MEMS optical switch.

  13. Regional Gastrointestinal Transit Times in Patients With Carcinoid Diarrhea: Assessment With the Novel 3D-Transit System

    DEFF Research Database (Denmark)

    Gregersen, Tine; Haase, Anne-Mette; Schlageter, Vincent

    2015-01-01

    BACKGROUND/AIMS: The paucity of knowledge regarding gastrointestinal motility in patients with neuroendocrine tumors and carcinoid diarrhea re-stricts targeted treatment. 3D-Transit is a novel, minimally invasive, ambulatory method for description of gastrointestinal motility. The system has not ...

  14. Optical Efficiency and R(T,I) Measurements of ACTPol TESes Using Time Domain Multiplexing Electronics

    Science.gov (United States)

    Pappas, C. G.; Beall, J.; Brevick, J.; Cho, H. M.; Devlin, M. J.; Fox, A.; Grace, E. A.; Hilton, G. C.; Hubmayr, J.; Irwin, K. D.; Klein, J.; Li, D.; Lungu, M.; Newburgh, L. B.; Nibarger, J. P.; Niemack, M. D.; McMahon, J. J.; Page, L. A.; Schmitt, B. L.; Staggs, S. T.; Van Lanen, J.; Wollack, E. J.

    2014-09-01

    We present new data on feedhorn-coupled transition-edge sensor devices fabricated for the second-generation receiver (ACTPol) for the Atacama cosmology telescope (ACT). First, we describe optical efficiency measurements of the latest ACTPol detector wafer, which has a average optical efficiency. Next, we discuss measurements of the TES resistance as a function of temperature and bias current () using the ACTPol time-domain multiplexing electronics. Qualitative agreement between data at low bias current and the two-fluid model prediction is shown. Using the two-fluid model and low bias current data, and at our operating bias current are calculated.

  15. A Metaheuristic Scheduler for Time Division Multiplexed Network-on-Chip

    DEFF Research Database (Denmark)

    Sørensen, Rasmus Bo; Sparsø, Jens; Pedersen, Mark Ruvald

    This report presents a metaheuristic scheduler for inter-processor communication in multi-core platforms using time division multiplexed (TDM) networks on chip (NOC). Input to the scheduler is a specification of the target multi-core platform and a specification of the application. Compared...... that this is possible with only negligible impact on the schedule period. We evaluate the scheduler with seven different applications from the MCSL NOC benchmark suite. We observe that the metaheuristics perform better than the greedy solution. In the special case of all-to-all communication with equal bandwidths...

  16. The value of applying nitroglycerin in 3D coronary MR angiography with real-time navigation technique

    International Nuclear Information System (INIS)

    Hackenbroch, M.; Meyer, C.; Schmiedel, A.; Hofer, U.; Flacke, S.; Kovacs, A.; Schild, H.; Sommer, T.; Tiemann, K.; Skowasch, D.

    2004-01-01

    Purpose: Nitroglycerin administration results in dilation of epicardial coronary vessels and in an increase in coronary blood flow, and has been suggested to improve MR coronary angiography. This study evaluates systematically whether administration of nitroglycerin improves the visualization of coronary arteries and, as a result, the detection of coronary artery stenosis during free breathing 3D coronary MR angiography. Materials and Methods: Coronary MR angiography was performed in 44 patients with suspected coronary artery disease at a 1.5 Tesla System (Intera, Philips Medical Systems) (a) with and (b) without continuous administration of intravenous nitroglycerin at a dose rate of 2.5 mg/h, using an ECG gated gradient echo sequence with real-time navigator correction (turbo field echo, in-plane resolution 0.70 x 0.79 mm 2 , acquisition window 80 ms). Equivalent segments of the coronary arteries in the sequences with and without nitroglycerin were evaluated for visualized vessel length and diameter, qualitative assessment of visualization using a four point grading scale and detection of stenoses >50%. Catheter coronary angiography was used as a gold-standard. Results: No significant differences were found between scans with and without nitroglycerin as to average length of the contiguously visualized vessel length (p>0.05) and diameter (p>0.05). There was also no significant difference in the coronary MR angiography with and without nitroglycerin in the average qualitative assessment score of the visualization of LM, proximal LAD, proximal CX, and proximal and distal RCA (2.1±0.8 and 2.2±0.7; p> 0.05). Sensitivity (77% [17/22] vs. 82% [18/22] p>0.05) and specificity (72% [13/18] vs. 72% [13/18] p>0.05) for the detection of coronary artery stenosis also did not differ significantly between scans with and without intravenous administration of nitroglycerin. Conclusion: Administration of nitroglycerin does not improve visualization of the coronary arteries and

  17. Time-resolved chemiluminescence strategy for multiplexed immunoassay of clenbuterol and ractopamine.

    Science.gov (United States)

    Han, Jing; Gao, Hongfei; Wang, Wenwen; Wang, Zhenxing; Fu, Zhifeng

    2013-10-15

    A novel time-resolved chemiluminescence (CL) strategy was proposed for immunoassay of multiple analytes in a single run. The strategy was performed based on the distinction of the kinetic characteristics of different CL reaction systems, which allowed detection of multiple analytes in different time windows. The strategy was evaluated by using clenbuterol and ractopamine as the model analytes. Horseradish peroxidase (HRP) and alkaline phosphatase (ALP) were adopted as the signal probes to tag the two antigens due to their very different CL kinetic characteristics. After the competitive immunoreactions, the two CL signals were simultaneously triggered by adding the CL coreactants. Then the signals for clenbuterol and ractopamine were in turn detected after 0.6 s and 25 min of the reaction triggering. Due to the distinguishable detection time windows for HRP and ALP, the cross-talk resulting from the mixed CL reaction systems was effectively avoided, which was frequently encountered in some other multiplexed immunoassays based on multi-label modes. The linear ranges for clenbuterol and ractopamine were both 1.0-500 ng/mL, with detection limits of 0.50 ng/mL (S/N=2). The results for real sample analysis demonstrated that this study could provide a simple, low-cost and fast approach toward multiplexed immunoassay. Copyright © 2013 Elsevier B.V. All rights reserved.

  18. Rectal bleeding after conformal 3D treatment of prostate cancer: Time to occurrence, response to treatment and duration of morbidity

    International Nuclear Information System (INIS)

    Teshima, Teruki; Hanks, Gerald E.; Hanlon, Alexandra L.; Peter, Ruth S.; Schultheiss, Timothy E.

    1997-01-01

    Purpose: Rectal bleeding is the most common late sequelae of high-dose 3D conformal treatment (3DCRT) for prostate cancer and may limit attempts to improve local control by dose escalation. The clinical course of this complication is reported including time to onset, response to treatment, duration of morbidity, and multivariate analysis for predictors. Methods and Materials: From March 1989 to June 1995, 670 patients with prostate cancer were treated with 3DCRT at Fox Chase Cancer Center. Eighty-nine patients developed Grade 2 or Grade 3 complications due to rectal bleeding and are analyzed. Multivariate analysis results for predictors of Grade 2 and 3 rectal bleeding are reported as well as time to development, response to initial and retreatment, and duration of morbidity. Results: The median time to occurrence is not significantly different (p = 0.09) for Grade 2 (13 months, range 4-41 months) compared to Grade 3 rectal bleeding (18 months, range 4-40 months), while the corresponding median duration of symptoms was significantly different (p < 0.0001) being 1 month (range 1-12) vs. 10 months (1-34) for Grade 2 and Grade 3 bleeding, respectively. For Grade 2 bleeding, medication or coagulation was highly effective as initial or retreatment resolving 66 of 73 patients. For Grade 3 bleeding, three patients responded without medication following blood transfusion only, while with multiple coagulations and medication 12 of 16 patients improved to ≤ Grade 1. Multivariate analysis demonstrates that dose is the only significant factor associated with Grade 2 (p = 0.01) or Grade 3 (p = 0.01) rectal bleeding. Of seven nonresponders to treatment for Grade 2 bleeding, three have died of intercurrent disease at 10, 19, and 26 months, while four are alive with continuing Grade 2 bleeding at 12, 14, 15, and 30 months after onset. The four nonresponders to treatment for Grade 3 bleeding continue to bleed 1, 9, 32, and 35 months after the third coagulation despite continuing

  19. Three-dimensional (3D) real-time conformal brachytherapy - a novel solution for prostate cancer treatment Part I. Rationale and method

    International Nuclear Information System (INIS)

    Fijalkowski, M.; Bialas, B.; Maciejewski, B.; Bystrzycka, J.; Slosarek, K.

    2005-01-01

    Recently, the system for conformal real-time high-dose-rate brachytherapy has been developed and dedicated in general for the treatment of prostate cancer. The aim of this paper is to present the 3D-conformal real-time brachytherapy technique introduced to clinical practice at the Institute of Oncology in Gliwice. Equipment and technique of 3D-conformal real time brachytherapy (3D-CBRT) is presented in detail and compared with conventional high-dose-rate brachytherapy. Step-by-step procedures of treatment planning are described, including own modifications. The 3D-CBRT offers the following advantages: (1) on-line continuous visualization of the prostate and acquisition of the series of NS images during the entire procedure of planning and treatment; (2) high precision of definition and contouring the target volume and the healthy organs at risk (urethra, rectum, bladder) based on 3D transrectal continuous ultrasound images; (3) interactive on-line dose optimization with real-time corrections of the dose-volume histograms (DVHs) till optimal dose distribution is achieved; (4) possibility to overcome internal prostate motion and set-up inaccuracies by stable positioning of the prostate with needles fixed to the template; (5) significant shortening of overall treatment time; (6) cost reduction - the treatment can be provided as an outpatient procedure. The 3D- real time CBRT can be advertised as an ideal conformal boost dose technique integrated or interdigitated with pelvic conformal external beam radiotherapy or as a monotherapy for prostate cancer. (author)

  20. 3D video

    CERN Document Server

    Lucas, Laurent; Loscos, Céline

    2013-01-01

    While 3D vision has existed for many years, the use of 3D cameras and video-based modeling by the film industry has induced an explosion of interest for 3D acquisition technology, 3D content and 3D displays. As such, 3D video has become one of the new technology trends of this century.The chapters in this book cover a large spectrum of areas connected to 3D video, which are presented both theoretically and technologically, while taking into account both physiological and perceptual aspects. Stepping away from traditional 3D vision, the authors, all currently involved in these areas, provide th

  1. 3D Animation Essentials

    CERN Document Server

    Beane, Andy

    2012-01-01

    The essential fundamentals of 3D animation for aspiring 3D artists 3D is everywhere--video games, movie and television special effects, mobile devices, etc. Many aspiring artists and animators have grown up with 3D and computers, and naturally gravitate to this field as their area of interest. Bringing a blend of studio and classroom experience to offer you thorough coverage of the 3D animation industry, this must-have book shows you what it takes to create compelling and realistic 3D imagery. Serves as the first step to understanding the language of 3D and computer graphics (CG)Covers 3D anim

  2. Router Designs for an Asynchronous Time-Division-Multiplexed Network-on-Chip

    DEFF Research Database (Denmark)

    Kasapaki, Evangelia; Sparsø, Jens; Sørensen, Rasmus Bo

    2013-01-01

    In this paper we explore the design of an asynchronous router for a time-division-multiplexed (TDM) network-on-chip (NOC) that is being developed for a multi-processor platform for hard real-time systems. TDM inherently requires a common time reference, and existing TDM-based NOC designs are either....... This adds hardware complexity and increases area and power consumption. We propose to use asynchronous routers in order to achieve a simpler, more robust and globally-asynchronous NOC, and this represents an unexplored point in the design space. The paper presents a range of alternative router designs. All...... routers have been synthesized for a 65nm CMOS technology, and the paper reports post-layout figures for area, speed and energy and compares the asynchronous designs with an existing mesochronous clocked router. The results show that an asynchronous router is 2 times smaller, marginally slower...

  3. A robust and scalable neuromorphic communication system by combining synaptic time multiplexing and MIMO-OFDM.

    Science.gov (United States)

    Srinivasa, Narayan; Zhang, Deying; Grigorian, Beayna

    2014-03-01

    This paper describes a novel architecture for enabling robust and efficient neuromorphic communication. The architecture combines two concepts: 1) synaptic time multiplexing (STM) that trades space for speed of processing to create an intragroup communication approach that is firing rate independent and offers more flexibility in connectivity than cross-bar architectures and 2) a wired multiple input multiple output (MIMO) communication with orthogonal frequency division multiplexing (OFDM) techniques to enable a robust and efficient intergroup communication for neuromorphic systems. The MIMO-OFDM concept for the proposed architecture was analyzed by simulating large-scale spiking neural network architecture. Analysis shows that the neuromorphic system with MIMO-OFDM exhibits robust and efficient communication while operating in real time with a high bit rate. Through combining STM with MIMO-OFDM techniques, the resulting system offers a flexible and scalable connectivity as well as a power and area efficient solution for the implementation of very large-scale spiking neural architectures in hardware.

  4. Detection of intestinal protozoa in paediatric patients with gastrointestinal symptoms by multiplex real-time PCR.

    Science.gov (United States)

    Maas, L; Dorigo-Zetsma, J W; de Groot, C J; Bouter, S; Plötz, F B; van Ewijk, B E

    2014-06-01

    The performance of a multiplex real-time PCR for the detection of Blastocystis, Dientamoeba fragilis, Giardia lamblia, Cryptosporidium species and Entamoeba species in faecal samples was evaluated in an observational prospective study. Paediatric patients (0-18 years) presenting with gastrointestinal symptoms and suspected of having enteroparasitic disease were included. A questionnaire on gastrointestinal symptoms and the chosen treatment was completed at the start of the study and after 6 weeks. Of 163 paediatric patients (mean age, 7.8 years), 114 (70%) had a PCR-positive faecal sample. D. fragilis was detected most frequently, in 101 patients, followed by Blastocystis in 49. In faecal samples of 47 patients, more than one protozoan was detected, mainly the combination of D. fragilis and Blastocystis. Reported gastrointestinal symptoms were abdominal pain (78%), nausea (30%), and altered bowel habits (28%). Eighty-nine of the PCR-positive patients were treated with antibiotics. A significant reduction in abdominal pain was observed both in treated and in untreated patients. This study demonstrated that multiplex real-time PCR detects a high percentage of intestinal protozoa in paediatric patients with gastrointestinal symptoms. However, interpretation and determination of the clinical relevance of a positive PCR result in this population are still difficult. © 2013 The Authors Clinical Microbiology and Infection © 2013 European Society of Clinical Microbiology and Infectious Diseases.

  5. Multiplex real-time PCR SYBR Green for detection and typing of group III Clostridium botulinum.

    Science.gov (United States)

    Anniballi, Fabrizio; Auricchio, Bruna; Delibato, Elisabetta; Antonacci, Monia; De Medici, Dario; Fenicia, Lucia

    2012-01-27

    Clostridium botulinum type C and type D belonging to the group III organisms, are mainly responsible for animal botulism outbreaks. Clinical signs alone are often insufficient to make a diagnosis of botulism and a laboratory confirmation is required. Laboratory confirmation can be performed by demonstrating the presence of botulinum neurotoxins in serum, gastrointestinal contents, liver, wound of sick or dead animals, or by demonstrating the presence of C. botulinum in gastrointestinal contents, liver, and wound. Demonstration of spores in gastrointestinal contents or tissue of animals with clinical signs indicative of botulism reinforces the clinical diagnosis. With the aim of detecting and typing C. botulinum group III organisms, a multiplex real-time PCR SYBR Green was developed and in-house validated. Selectivity, limit of detection, relative accuracy, relative specificity, relative sensitivity, and repeatability of the method were investigated. The multiplex real-time PCR SYBR green used showed a 100% selectivity, 100% relative accuracy, 100% relative specificity, 100% relative sensitivity and a limit of detection of 277 and 580 DNA copies for C. botulinum type C and C. botulinum type D, respectively. The method reported here represents a suitable tool for laboratory diagnosis of type C and D botulism and for testing a large number of samples collected during the animal botulism surveillance and prevention activities. Copyright © 2011 Elsevier B.V. All rights reserved.

  6. Finite-element-method (FEM model generation of time-resolved 3D echocardiographic geometry data for mitral-valve volumetry

    Directory of Open Access Journals (Sweden)

    Kikinis Ron

    2006-03-01

    Full Text Available Abstract Introduction Mitral Valve (MV 3D structural data can be easily obtained using standard transesophageal echocardiography (TEE devices but quantitative pre- and intraoperative volume analysis of the MV is presently not feasible in the cardiac operation room (OR. Finite element method (FEM modelling is necessary to carry out precise and individual volume analysis and in the future will form the basis for simulation of cardiac interventions. Method With the present retrospective pilot study we describe a method to transfer MV geometric data to 3D Slicer 2 software, an open-source medical visualization and analysis software package. A newly developed software program (ROIExtract allowed selection of a region-of-interest (ROI from the TEE data and data transformation for use in 3D Slicer. FEM models for quantitative volumetric studies were generated. Results ROI selection permitted the visualization and calculations required to create a sequence of volume rendered models of the MV allowing time-based visualization of regional deformation. Quantitation of tissue volume, especially important in myxomatous degeneration can be carried out. Rendered volumes are shown in 3D as well as in time-resolved 4D animations. Conclusion The visualization of the segmented MV may significantly enhance clinical interpretation. This method provides an infrastructure for the study of image guided assessment of clinical findings and surgical planning. For complete pre- and intraoperative 3D MV FEM analysis, three input elements are necessary: 1. time-gated, reality-based structural information, 2. continuous MV pressure and 3. instantaneous tissue elastance. The present process makes the first of these elements available. Volume defect analysis is essential to fully understand functional and geometrical dysfunction of but not limited to the valve. 3D Slicer was used for semi-automatic valve border detection and volume-rendering of clinical 3D echocardiographic

  7. Deriving 3-D Time-Series Ground Deformations Induced by Underground Fluid Flows with InSAR: Case Study of Sebei Gas Fields, China

    Directory of Open Access Journals (Sweden)

    Xiaoge Liu

    2017-11-01

    Full Text Available Multi-temporal Interferometric Synthetic Aperture Radar (MT-InSAR technique has proven to be a powerful tool for the monitoring of time-series ground deformations along the line-of-sight (LOS direction. However, the one-dimensional (1-D measurements cannot provide comprehensive information for interpreting the related geo-hazards. Recently, a novel method has been proposed to map the three-dimensional (3-D deformation associated with underground fluid flows based on single-track InSAR LOS measurements and the deformation modeling associated with the Green’s function. In this study, the method is extended in temporal domain by exploiting the MT-InSAR measurements, and applied for the first time to investigate the 3-D time series deformation over Sebei gas field in Qinghai, Northwest China with 37 Sentinel-1 images acquired during October 2014–July 2017. The estimated 3-D time series deformations provide a more complete view of ongoing deformation processes as compared to the 1-D time series deformations or the 3-D deformation velocities, which is of great importance for assessing the possible geohazards. In addition, the extended method allows for the retrieval of time series of fluid volume changes due to the gas extraction in the Sebei field, which agrees well with those from the PetroChina Qinghai Oilfield Company Yearbooks (PQOCYs. This provides a new way to study the variations of subsurface fluids at unprecedented resolution.

  8. Shear waves in near surface 3D media-SH-wavefield separation, refraction time migration and tomography

    Science.gov (United States)

    Woelz, Susanne; Rabbel, Wolfgang; Mueller, Christof

    2009-05-01

    When investigating topographically irregular layers in the near surface with shear waves, it is of particular importance to consider the 3D-nature of wave propagation. Depending on the layer geometry and on the spatial arrangement of source- and receiver-points significant lateral ray bending can occur causing side-swipe traveltime effects and complicated polarisation patterns. As an example we present a study where 3D-shear wave refraction measurements were applied in order to reconstruct the geometry of a silted ancient harbour basin at the archaeological site of Miletus (West Turkey). Seismic signals were generated with a three-component vector force and recorded with three-component geophones arranged in 2D-arrays of 1 m grid spacing. Since a correct identification of refracted S-wave arrivals is a precondition to traveltime interpretation we investigated a method to decompose these wavefields with respect to their polarisation and azimuth of propagation. Taking advantage of the 2D-geophone arrangement we applied the following processing approach: In case of general lateral heterogeneity a decomposition can be performed by applying the curl and divergence operations to the vector wavefields recorded in 2D-arrays. The separated tangential and normal components to the wavefront in a plane are finally enhanced by combining the different force components in order to eliminate the radiation characteristics of the source. The decomposed wavefield was then the basis for 3D-refractor imaging through a newly formulated map migration of the refracted traveltime field. This technique was developed to map coherent basement structure on the meter-scale. Supplemental tomographic inversion using the refractor topography model as input provided a plausible velocity model, exhibiting characteristic anomalies such as a prominent low velocity zone overlain by a high velocity layer in the refractor. The seismic velocity structure suggests that the harbour basin was locally filled

  9. Real-Time Perceptual Simulation of Moving Sources: Application to the Leslie Cabinet and 3D Sound Immersion

    Directory of Open Access Journals (Sweden)

    T. Voinier

    2008-07-01

    Full Text Available Perception of moving sound sources obeys different brain processes from those mediating the localization of static sound events. In view of these specificities, a preprocessing model was designed, based on the main perceptual cues involved in the auditory perception of moving sound sources, such as the intensity, timbre, reverberation, and frequency shift processes. This model is the first step toward a more general moving sound source system, including a system of spatialization. Two applications of this model are presented: the simulation of a system involving rotating sources, the Leslie Cabinet and a 3D sound immersion installation based on the sonification of cosmic particles, the Cosmophone.

  10. Real-Time Perceptual Simulation of Moving Sources: Application to the Leslie Cabinet and 3D Sound Immersion

    Directory of Open Access Journals (Sweden)

    Kronland-Martinet R

    2008-01-01

    Full Text Available Perception of moving sound sources obeys different brain processes from those mediating the localization of static sound events. In view of these specificities, a preprocessing model was designed, based on the main perceptual cues involved in the auditory perception of moving sound sources, such as the intensity, timbre, reverberation, and frequency shift processes. This model is the first step toward a more general moving sound source system, including a system of spatialization. Two applications of this model are presented: the simulation of a system involving rotating sources, the Leslie Cabinet and a 3D sound immersion installation based on the sonification of cosmic particles, the Cosmophone.

  11. Temporal multiplexing for economical measurement of power versus time on NIF

    Energy Technology Data Exchange (ETDEWEB)

    Thomas, S.; Boyd, B.; Davis, D.T.; Hall, B.

    1996-10-01

    The researchers have designed an economical device to measure the power time history in the National Ignition Facility`s (NIF) 192 beam laser. The heart of the system is a commercial, high-speed, four-channel digitizer with a 15,000 point record length. Samples of several beams are taken with fiberoptic pickoffs, separated in time with appropriate fiberoptic delays and presented to high-speed vacuum photodiodes, which convert the samples to electrical signals for the digitizer. Amplitude and time multiplexing are used to cover the required dynamic range and to record 12 samples on the digitizer, making the cost per sample competitive with alternative approaches. Forty-eight digitizers can record the required three samples from each of the 192 beams. An additional similar but lower bandwidth system is used to record the backreflected light from the main laser amplifiers and elsewhere. The recording electronics are discussed in detail.

  12. Temporal multiplexing for economical measurement of power versus time on NIF

    International Nuclear Information System (INIS)

    Thomas, S.; Boyd, B.; Davis, D.T.; Hall, B.

    1996-10-01

    The researchers have designed an economical device to measure the power time history in the National Ignition Facility's (NIF) 192 beam laser. The heart of the system is a commercial, high-speed, four-channel digitizer with a 15,000 point record length. Samples of several beams are taken with fiberoptic pickoffs, separated in time with appropriate fiberoptic delays and presented to high-speed vacuum photodiodes, which convert the samples to electrical signals for the digitizer. Amplitude and time multiplexing are used to cover the required dynamic range and to record 12 samples on the digitizer, making the cost per sample competitive with alternative approaches. Forty-eight digitizers can record the required three samples from each of the 192 beams. An additional similar but lower bandwidth system is used to record the backreflected light from the main laser amplifiers and elsewhere. The recording electronics are discussed in detail

  13. Clinical value of real time 3D sonohysterography and 2D sonohysterography in comparison to hysteroscopy with subsequent histopathological examination in perimenopausal women with abnormal uterine bleeding.

    Science.gov (United States)

    Kowalczyk, Dariusz; Guzikowski, Wojciech; Więcek, Jacek; Sioma-Markowska, Urszula

    2012-01-01

    In many publications the transvaginal ultrasound is regarded as the first step to diagnose the cause of uterine bleeding in perimenopausal women. In order to improve the sensitivity and specificity of the conventional ultrasound physiological saline solution was administered to the uterine cavity and after expansion of its walls the interior uterine cavity was examined. And this procedure is called 2D sonohysterography (SIS 2D). By the ultrasound scanners which enable to get 3D real time image a spatial evaluation of the uterine cavity is possible. Clinical value of the real time 3D sonohysterography and 2D sonohysterography compared to hysteroscopy with histopathological examination in perimenopausal women. The study concerned a group of 97 perimenopausal women with abnormal uterine bleeding. In all of them after a standard transvaginal ultrasonography a catheter was inserted into the uterine cavity. After expansion of the uterine walls by administering about 10 ml of 0,9% saline solution the uterine cavity was examined by conventional sonohysterography. Then a 3D imaging mode was activated and the uterine interior was examined by real time 3D ultrasonography. The ultrasound results were verified by hysteroscopy, the endometrial lesions were removed and underwent a histopathological examination. In two cases the SIS examination was impossible because of uterine cervix atresion. In the rest of examined group the SIS 2D sensitivity and specificity came up to 72 and 96% respectively. In the group of SIS 3D the sensitivity and specificity reached 83 and 99% respectively. Adding SIS 3D, a minimally invasive method, to conventional sonohysterography improves the precision of diagnosis of endometrial pathology, allows to get three-dimensional image of the uterine cavity and enables examination of endometrial lesions. The diagnostic precision of this procedure is similar to the results achieved by hysteroscopy.

  14. Real-time multiplex PCR assay for detection of Yersinia pestis and Yersinia pseudotuberculosis.

    Science.gov (United States)

    Matero, Pirjo; Pasanen, Tanja; Laukkanen, Riikka; Tissari, Päivi; Tarkka, Eveliina; Vaara, Martti; Skurnik, Mikael

    2009-01-01

    A multiplex real-time polymerase chain reaction (PCR) assay was developed for the detection of Yersinia pestis and Yersinia pseudotuberculosis. The assay includes four primer pairs, two of which are specific for Y. pestis, one for Y. pestis and Y. pseudotuberculosis and one for bacteriophage lambda; the latter was used as an internal amplification control. The Y. pestis-specific target genes in the assay were ypo2088, a gene coding for a putative methyltransferase, and the pla gene coding for the plasminogen activator. In addition, the wzz gene was used as a target to specifically identify both Y. pestis and the closely related Y. pseudotuberculosis group. The primer and probe sets described for the different genes can be used either in single or in multiplex PCR assays because the individual probes were designed with different fluorochromes. The assays were found to be both sensitive and specific; the lower limit of the detection was 10-100 fg of extracted Y. pestis or Y. pseudotuberculosis total DNA. The sensitivity of the tetraplex assay was determined to be 1 cfu for the ypo2088 and pla probe labelled with FAM and JOE fluorescent dyes, respectively.

  15. Head and neck paragangliomas: improved tumor detection using contrast-enhanced 3D time-of-flight MR angiography as compared with fat-suppressed MR imaging techniques

    NARCIS (Netherlands)

    van den Berg, René; Verbist, Berit M.; Mertens, Bart J. A.; van der Mey, Andel G. L.; van Buchem, Mark A.

    2004-01-01

    BACKGROUND AND PURPOSE: MR imaging techniques have proved their efficacy in imaging the head and neck region. In this study, we compared T1-weighted, dual T2-weighted, and fat-suppressed MR imaging and unenhanced and contrast-enhanced 3D time-of-flight MR angiography sequences for detection of head

  16. 3D additive-manufactured nanocomposite magnetic scaffolds: Effect of the application mode of a time-dependent magnetic field on hMSCs behavior

    Directory of Open Access Journals (Sweden)

    Ugo D'Amora

    2017-09-01

    The aim of the present study was to analyze the effect of the application mode of a time-dependent magnetic field on the behavior of human mesenchymal stem cells (hMSCs seeded on 3D additive-manufactured poly(ɛ-caprolactone/iron-doped hydroxyapatite (PCL/FeHA nanocomposite scaffolds.

  17. Development of a multiplex real-time PCR assay for phylogenetic analysis of Uropathogenic Escherichia coli.

    Science.gov (United States)

    Hasanpour, Mojtaba; Najafi, Akram

    2017-06-01

    Uropathogenic Escherichia coli (UPEC) is among major pathogens causing 80-90% of all episodes of urinary tract infections (UTIs). Recently, E. coli strains are divided into eight main phylogenetic groups including A, B1, B2, C, D, E, F, and clade I. This study was aimed to develop a rapid, sensitive, and specific multiplex real time PCR method capable of detecting phylogenetic groups of E. coli strains. This study was carried out on E. coli strains (isolated from the patient with UTI) in which the presence of all seven target genes had been confirmed in our previous phylogenetic study. An EvaGreen-based singleplex and multiplex real-time PCR with melting curve analysis was designed for simultaneous detection and differentiation of these genes. The primers were selected mainly based on the production of amplicons with melting temperatures (T m ) ranging from 82°C to 93°C and temperature difference of more than 1.5°C between each peak.The multiplex real-time PCR assays that have been developed in the present study were successful in detecting the eight main phylogenetic groups. Seven distinct melting peaks were discriminated, with Tm value of 93±0.8 for arpA, 89.2±0.1for chuA, 86.5±0.1 for yjaA, 82.3±0.2 for TspE4C2, 87.8±0.1for trpAgpC, 85.4±0.6 for arpAgpE genes, and 91±0.5 for the internal control. To our knowledge, this study is the first melting curve-based real-time PCR assay developed for simultaneous and discrete detection of these seven target genes. Our findings showed that this assay has the potential to be a rapid, reliable and cost-effective alternative for routine phylotyping of E. coli strains. Copyright © 2017 Elsevier B.V. All rights reserved.

  18. 3-D printers for libraries

    CERN Document Server

    Griffey, Jason

    2014-01-01

    As the maker movement continues to grow and 3-D printers become more affordable, an expanding group of hobbyists is keen to explore this new technology. In the time-honored tradition of introducing new technologies, many libraries are considering purchasing a 3-D printer. Jason Griffey, an early enthusiast of 3-D printing, has researched the marketplace and seen several systems first hand at the Consumer Electronics Show. In this report he introduces readers to the 3-D printing marketplace, covering such topics asHow fused deposition modeling (FDM) printing workBasic terminology such as build

  19. 3D Audio Acquisition and Reproduction Systems

    OpenAIRE

    Evrard, Marc; André, Cédric; Embrechts, Jean-Jacques; Verly, Jacques

    2011-01-01

    This presentation introduces two different research projects dealing with 3D audio for 3D-stereoscopic movies. The first project “3D audio acquisition for real time applications” studies the best method for acquiring a full 3D audio soundscape on location and for processing it in real-time for further reproduction. The second project “Adding 3D sound to 3D cinema” is aimed towards the study of reproducing a 3D soundscape consistent with the visual content of a 3D-stereoscopic movie. ...

  20. Europeana and 3D

    Science.gov (United States)

    Pletinckx, D.

    2011-09-01

    The current 3D hype creates a lot of interest in 3D. People go to 3D movies, but are we ready to use 3D in our homes, in our offices, in our communication? Are we ready to deliver real 3D to a general public and use interactive 3D in a meaningful way to enjoy, learn, communicate? The CARARE project is realising this for the moment in the domain of monuments and archaeology, so that real 3D of archaeological sites and European monuments will be available to the general public by 2012. There are several aspects to this endeavour. First of all is the technical aspect of flawlessly delivering 3D content over all platforms and operating systems, without installing software. We have currently a working solution in PDF, but HTML5 will probably be the future. Secondly, there is still little knowledge on how to create 3D learning objects, 3D tourist information or 3D scholarly communication. We are still in a prototype phase when it comes to integrate 3D objects in physical or virtual museums. Nevertheless, Europeana has a tremendous potential as a multi-facetted virtual museum. Finally, 3D has a large potential to act as a hub of information, linking to related 2D imagery, texts, video, sound. We describe how to create such rich, explorable 3D objects that can be used intuitively by the generic Europeana user and what metadata is needed to support the semantic linking.

  1. EUROPEANA AND 3D

    Directory of Open Access Journals (Sweden)

    D. Pletinckx

    2012-09-01

    Full Text Available The current 3D hype creates a lot of interest in 3D. People go to 3D movies, but are we ready to use 3D in our homes, in our offices, in our communication? Are we ready to deliver real 3D to a general public and use interactive 3D in a meaningful way to enjoy, learn, communicate? The CARARE project is realising this for the moment in the domain of monuments and archaeology, so that real 3D of archaeological sites and European monuments will be available to the general public by 2012. There are several aspects to this endeavour. First of all is the technical aspect of flawlessly delivering 3D content over all platforms and operating systems, without installing software. We have currently a working solution in PDF, but HTML5 will probably be the future. Secondly, there is still little knowledge on how to create 3D learning objects, 3D tourist information or 3D scholarly communication. We are still in a prototype phase when it comes to integrate 3D objects in physical or virtual museums. Nevertheless, Europeana has a tremendous potential as a multi-facetted virtual museum. Finally, 3D has a large potential to act as a hub of information, linking to related 2D imagery, texts, video, sound. We describe how to create such rich, explorable 3D objects that can be used intuitively by the generic Europeana user and what metadata is needed to support the semantic linking.

  2. MERRA Chem 3D IAU C-Grid Wind and Mass Flux, Time Average 3-Hourly (eta coord, 2/3x1/2L72) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3NVCHM or tavg3_3d_chm_Nv data product is the MERRA Data Assimilation System Chemistry 3-Dimensional chemistry on layers that is time averaged, 3D model...

  3. Nucleic acid programmable protein array a just-in-time multiplexed protein expression and purification platform.

    Science.gov (United States)

    Qiu, Ji; LaBaer, Joshua

    2011-01-01

    Systematic study of proteins requires the availability of thousands of proteins in functional format. However, traditional recombinant protein expression and purification methods have many drawbacks for such study at the proteome level. We have developed an innovative in situ protein expression and capture system, namely NAPPA (nucleic acid programmable protein array), where C-terminal tagged proteins are expressed using an in vitro expression system and efficiently captured/purified by antitag antibodies coprinted at each spot. The NAPPA technology presented in this chapter enable researchers to produce and display fresh proteins just in time in a multiplexed high-throughput fashion and utilize them for various downstream biochemical researches of interest. This platform could revolutionize the field of functional proteomics with it ability to produce thousands of spatially separated proteins in high density with narrow dynamic rand of protein concentrations, reproducibly and functionally. Copyright © 2011 Elsevier Inc. All rights reserved.

  4. ONU migration in dynamic Time and Wavelength Division Multiplexed Passive Optical Network (TWDM-PON).

    Science.gov (United States)

    Yang, Hongyang; Sun, Weiqiang; Hu, Weisheng; Li, Jun

    2013-09-09

    We propose a novel Optical Network Units (ONU) migration mechanism within the Time and Wavelength Division Multiplexed PON (TWDM-PON) framework by rearranging the working ONUs to a minimum number of wavelengths and turning off the rest to save power. We show through simulation that the number of working wavelengths can be minimized up to a theoretical lower bound, e.g. 23%, under the typical ONU online profiles. We further investigate how the migration interval and delay influence the user Service Level Agreement (SLA). We find that under the example ONU online profiles, 99.99% ONU SLA can be realized with the migration delay of 1000 milli-seconds. However to realize 99.999% ONU SLA, the migration delay must be 100 milli-seconds or lower.

  5. 3D Audio System

    Science.gov (United States)

    1992-01-01

    Ames Research Center research into virtual reality led to the development of the Convolvotron, a high speed digital audio processing system that delivers three-dimensional sound over headphones. It consists of a two-card set designed for use with a personal computer. The Convolvotron's primary application is presentation of 3D audio signals over headphones. Four independent sound sources are filtered with large time-varying filters that compensate for motion. The perceived location of the sound remains constant. Possible applications are in air traffic control towers or airplane cockpits, hearing and perception research and virtual reality development.

  6. Dynamic Time Multiplexing Fabrication of Holographic Polymer Dispersed Liquid Crystals for Increased Wavelength Sensitivity

    Science.gov (United States)

    Fontecchio, Adam K. (Inventor); Rai, Kashma (Inventor)

    2017-01-01

    Described herein is a new holographic polymer dispersed liquid crystal (HPDLC) medium with broadband reflective properties, and a new technique for fabrication of broadband HPDLC mediums. The new technique involves dynamic variation of the holography setup during HPDLC formation, enabling the broadening of the HPDLC medium's wavelength response. Dynamic variation of the holography setup may include the rotation and/or translation of one or more motorized stages, allowing for time and spatial, or angular, multiplexing through variation of the incident angles of one or more laser beams on a pre-polymer mixture during manufacture. An HPDLC medium manufactured using these techniques exhibits improved optical response by reflecting a broadband spectrum of wavelengths. A new broadband holographic polymer dispersed liquid crystal thin film polymeric mirror stack with electrically-switchable beam steering capability is disclosed. XXXX Described herein is a new holographic polymer dispersed liquid crystal (HPDLC) medium with broadband reflective properties, and a new technique for fabrication of broadband 10 HPDLC mediums. The new technique involves dynamic variation of the holography setup during HPDLC formation, enabling the broadening of the HPDLC medium's wavelength response. Dynamic variation of the holography setup may include the rotation and/or translation of one or more 15 motorized stages, allowing for time and spatial, or angular, multiplexing through variation of the incident angles of one or more laser beams on a pre-polymer mixture during manufacture. An HPDLC medium manufactured using these techniques exhibits improved optical response by reflecting 20 a broadband spectrum of wavelengths. A new broadband holographic polymer dispersed liquid crystal thin film polymeric mirror stack with electrically switchable beam steering capability is disclosed.

  7. Comparison of Real-Time Multiplex Human Papillomavirus (HPV) PCR Assays with INNO-LiPA HPV Genotyping Extra Assay▿

    OpenAIRE

    Else, Elizabeth A.; Swoyer, Ryan; Zhang, Yuhua; Taddeo, Frank J.; Bryan, Janine T.; Lawson, John; Van Hyfte, Inez; Roberts, Christine C.

    2011-01-01

    Real-time type-specific multiplex human papillomavirus (HPV) PCR assays were developed to detect HPV DNA in samples collected for the efficacy determination of the quadrivalent HPV (type 6, 11, 16, and 18) L1 virus-like particle (VLP) vaccine (Gardasil). Additional multiplex (L1, E6, and E7 open reading frame [ORF]) or duplex (E6 and E7 ORF) HPV PCR assays were developed to detect high-risk HPV types, including HPV type 31 (HPV31), HPV33, HPV35, HPV39, HPV45, HPV51, HPV52, HPV56, HPV58, and H...

  8. Multi-purposable filaments of HPMC for 3D printing of medications with tailored drug release and timed-absorption.

    Science.gov (United States)

    Kadry, Hossam; Al-Hilal, Taslim A; Keshavarz, Ali; Alam, Farzana; Xu, Changxue; Joy, Abraham; Ahsan, Fakhrul

    2018-04-20

    Three-dimensional printing (3DP), though developed for nonmedical applications and once regarded as futuristic only, has recently been deployed for the fabrication of pharmaceutical products. However, the existing feeding materials (inks and filaments) that are used for printing drug products have various shortcomings, including the lack of biocompatibility, inadequate extrudability and printability, poor drug loading, and instability. Here, we have sought to develop a filament using a single pharmaceutical polymer, with no additives, which can be multi-purposed and manipulated by computational design for the preparation of tablets with desired release and absorption patterns. As such, we have used hydroxypropyl-methylcellulose (HPMC) and diltiazem, a model drug, to prepare both drug-free and drug-impregnated filaments, and investigated their thermal and crystalline properties, studied the cytotoxicity of the filaments, designed and printed tablets with various infill densities and patterns. By alternating the drug-free and drug-impregnated filaments, we fabricated various types of tablets, studied the drug release profiles, and assessed oral absorption in rats. Both diltiazem and HPMC were stable at extrusion and printing temperatures, and the drug loading was 10% (w/w). The infill density, as well as infill patterns, influenced the drug release profile, and thus, when the infill density was increased to 100%, the percentage of drug released dramatically declined. Tablets with alternating drug-free and drug-loaded layers showed delayed and intermittent drug release, depending on when the drug-loaded layers encountered the dissolution media. Importantly, the oral absorption patterns accurately reproduced the drug release profiles and showed immediate, extended, delayed and episodic absorption of the drug from the rat gastrointestinal tract (GIT). Overall, we have demonstrated here that filaments for 3D printers can be prepared from a pharmaceutical polymer with no

  9. Open 3D Projects

    Directory of Open Access Journals (Sweden)

    Felician ALECU

    2010-01-01

    Full Text Available Many professionals and 3D artists consider Blender as being the best open source solution for 3D computer graphics. The main features are related to modeling, rendering, shading, imaging, compositing, animation, physics and particles and realtime 3D/game creation.

  10. Open 3D Projects

    OpenAIRE

    Felician ALECU

    2010-01-01

    Many professionals and 3D artists consider Blender as being the best open source solution for 3D computer graphics. The main features are related to modeling, rendering, shading, imaging, compositing, animation, physics and particles and realtime 3D/game creation.

  11. Validity of computational hemodynamics in human arteries based on 3D time-of-flight MR angiography and 2D electrocardiogram gated phase contrast images

    Science.gov (United States)

    Yu, Huidan (Whitney); Chen, Xi; Chen, Rou; Wang, Zhiqiang; Lin, Chen; Kralik, Stephen; Zhao, Ye

    2015-11-01

    In this work, we demonstrate the validity of 4-D patient-specific computational hemodynamics (PSCH) based on 3-D time-of-flight (TOF) MR angiography (MRA) and 2-D electrocardiogram (ECG) gated phase contrast (PC) images. The mesoscale lattice Boltzmann method (LBM) is employed to segment morphological arterial geometry from TOF MRA, to extract velocity profiles from ECG PC images, and to simulate fluid dynamics on a unified GPU accelerated computational platform. Two healthy volunteers are recruited to participate in the study. For each volunteer, a 3-D high resolution TOF MRA image and 10 2-D ECG gated PC images are acquired to provide the morphological geometry and the time-varying flow velocity profiles for necessary inputs of the PSCH. Validation results will be presented through comparisons of LBM vs. 4D Flow Software for flow rates and LBM simulation vs. MRA measurement for blood flow velocity maps. Indiana University Health (IUH) Values Fund.

  12. Relaxation time of the global order parameter on multiplex networks: The role of interlayer coupling in Kuramoto oscillators

    Science.gov (United States)

    Allen-Perkins, Alfonso; de Assis, Thiago Albuquerque; Pastor, Juan Manuel; Andrade, Roberto F. S.

    2017-10-01

    This work considers the time scales associated with the global order parameter and the interlayer synchronization of coupled Kuramoto oscillators on multiplexes. For two-layer multiplexes with an initially high degree of synchronization in each layer, the difference between the average phases in each layer is analyzed from two different perspectives: the spectral analysis and the nonlinear Kuramoto model. Both viewpoints confirm that the prior time scales are inversely proportional to the interlayer coupling strength. Thus, increasing the interlayer coupling always shortens the transient regimes of both the global order parameter and the interlayer synchronization. Surprisingly, the analytical results show that the convergence of the global order parameter is faster than the interlayer synchronization, and the latter is generally faster than the global synchronization of the multiplex. The formalism also outlines the effects of frequencies on the difference between the average phases of each layer, and it identifies the conditions for an oscillatory behavior. Computer simulations are in fairly good agreement with the analytical findings, and they reveal that the time scale of the global order parameter is half the size of the time scale of the multiplex, if not smaller.

  13. Simultaneous quantitative assessment of circulating cell-free mitochondrial and nuclear DNA by multiplex real-time PCR

    Directory of Open Access Journals (Sweden)

    Peng Xia

    2009-01-01

    Full Text Available Quantification of circulating nucleic acids in plasma and serum could be used as a non-invasive diagnostic tool for monitoring a wide variety of diseases and conditions. We describe here a rapid, simple and accurate multiplex real-time PCR method for direct synchronized analysis of circulating cell-free (ccf mitochondrial (mtDNA and nuclear (nDNA DNA in plasma and serum samples. The method is based on one-step multiplex real-time PCR using a FAM-labeled MGB probe and primers to amplify the mtDNA sequence of the ATP 8 gene, and a VIC-labeled MGB probe and primers to amplify the nDNA sequence of the glycerinaldehyde-3-phosphate-dehydrogenase (GAPDH gene, in plasma and serum samples simultaneously. The efficiencies of the multiplex assays were measured in serial dilutions. Based on the simulation of the PCR reaction kinetics, the relative quantities of ccf mtDNA were calculated using a very simple equation. Using our optimised real-time PCR conditions, close to 100% efficiency was obtained from the two assays. The two assays performed in the dilution series showed very good and reproducible correlation to each other. This optimised multiplex real-time PCR protocol can be widely used for synchronized quantification of mtDNA and nDNA in different samples, with a very high rate of efficiency.

  14. Optimized guidance of percutaneous edge-to edge repair of the mitral valve using real-time 3-D transesophageal echocardiography.

    Science.gov (United States)

    Altiok, Ertunc; Becker, Michael; Hamada, Sandra; Reith, Sebastian; Marx, Nikolaus; Hoffmann, Rainer

    2011-08-01

    Percutaneous edge-to-edge repair with the MitraClip device has been shown to allow effective treatment of mitral regurgitation. It is mainly guided by transesophageal echocardiography while fluoroscopic guidance is of less importance. The impact of real-time three-dimensional transesophageal echocardiography (RT 3-D TEE) for guidance of this complex interventional procedure has not been evaluated. In 28 high-surgical risk patients with moderate or severe mitral regurgitation (mean age 67 ± 10 years; 15 male), 2-D and RT 3-D TEE were used for the guidance of percutaneous edge-to-edge mitral valve repair using the MitraClip device. We performed a structured analysis to compare information and guidance capacity provided by RT 3-D TEE compared to 2-D TEE. RT 3-D TEE was found to provide advantages in 9 of 11 steps of the percutaneous mitral repair procedure. The advantages related to optimized definition of the transseptal puncture site, improved guidance of the clip delivery system towards the mitral valve, precise positioning of the clip delivery system simultaneously in anterior-posterior and lateral-medial direction above the mitral valve considering mitral valve scallops A2 and P2 and valvular regurgitation jet position, adjustment of the opened clip-arms perpendicular to the commissural line, visualization of the clip position relative to the valvular orifice and of the remaining regurgitant jet after clip closure from atrial as well as ventricular views providing double orifice images and thereby allowing confirmation or rejection of clip position in medial-lateral direction. RT 3-D TEE was inferior to 2-D TEE for leaflet grasping and analysis of leaflet insertion. In complex interventional edge-to-edge repair with the MitraClip device requiring optimal spatial information RT 3-D TEE allows improved guidance of the procedure. RT 3-D TEE guidance compared with 2-D TEE guidance alone resulted in greater operator confidence to adequately perform the procedure.

  15. Novel, high-definition 3-D endoscopy system with real-time compression communication system to aid diagnoses and treatment between hospitals in Thailand.

    Science.gov (United States)

    Uemura, Munenori; Kenmotsu, Hajime; Tomikawa, Morimasa; Kumashiro, Ryuichi; Yamashita, Makoto; Ikeda, Testuo; Yamashita, Hiromasa; Chiba, Toshio; Hayashi, Koichi; Sakae, Eiji; Eguchi, Mitsuo; Fukuyo, Tsuneo; Chittmittrapap, Soottiporn; Navicharern, Patpong; Chotiwan, Pornarong; Pattana-Arum, Jirawat; Hashizume, Makoto

    2015-05-01

    Traditionally, laparoscopy has been based on 2-D imaging, which represents a considerable challenge. As a result, 3-D visualization technology has been proposed as a way to better facilitate laparoscopy. We compared the latest 3-D systems with high-end 2-D monitors to validate the usefulness of new systems for endoscopic diagnoses and treatment in Thailand. We compared the abilities of our high-definition 3-D endoscopy system with real-time compression communication system with a conventional high-definition (2-D) endoscopy system by asking health-care staff to complete tasks. Participants answered questionnaires and whether procedures were easier using our system or the 2-D endoscopy system. Participants were significantly faster at suture insertion with our system (34.44 ± 15.91 s) than with the 2-D system (52.56 ± 37.51 s) (P < 0.01). Most surgeons thought that the 3-D system was good in terms of contrast, brightness, perception of the anteroposterior position of the needle, needle grasping, inserting the needle as planned, and needle adjustment during laparoscopic surgery. Several surgeons highlighted the usefulness of exposing and clipping the bile duct and gallbladder artery, as well as dissection from the liver bed during laparoscopic surgery. In an image-transfer experiment with RePure-L®, participants at Rajavithi Hospital could obtain reconstructed 3-D images that were non-inferior to conventional images from Chulalongkorn University Hospital (10 km away). These data suggest that our newly developed system could be of considerable benefit to the health-care system in Thailand. Transmission of moving endoscopic images from a center of excellence to a rural hospital could help in the diagnosis and treatment of various diseases. © 2015 Japan Society for Endoscopic Surgery, Asia Endosurgery Task Force and Wiley Publishing Asia Pty Ltd.

  16. IZDELAVA TISKALNIKA 3D

    OpenAIRE

    Brdnik, Lovro

    2015-01-01

    Diplomsko delo analizira trenutno stanje 3D tiskalnikov na trgu. Prikazan je razvoj in principi delovanja 3D tiskalnikov. Predstavljeni so tipi 3D tiskalnikov, njihove prednosti in slabosti. Podrobneje je predstavljena zgradba in delovanje koračnih motorjev. Opravljene so meritve koračnih motorjev. Opisana je programska oprema za rokovanje s 3D tiskalniki in komponente, ki jih potrebujemo za izdelavo. Diploma se oklepa vprašanja, ali je izdelava 3D tiskalnika bolj ekonomična kot pa naložba v ...

  17. Optical Synchronization of a 10-G Ethernet Packet and Time-Division Multiplexing to a 50-Gb/s Signal Using an Optical Time Lens

    DEFF Research Database (Denmark)

    Hu, Hao; Laguardia Areal, Janaina; Palushani, Evarist

    2010-01-01

    A 10-G Ethernet packet with maximum packet size of 1518 bytes is synchronized to a master clock with 200-kHz frequency offset using a time lens. The input 10-Gb/s non-return-to-zero packet is at the same time converted into a return-to-zero (RZ) packet with a pulsewidth of 10 ps and then time......-division multiplexed with four 10-Gb/s optical time-division-multiplexing (OTDM) channels, thus constituting a 50-Gb/s OTDM serial signal. Error-free performances of the synchronized RZ packet and demultiplexed packet from the aggregated 50-Gb/s OTDM signal are achieved....

  18. Fast 3D ultrashort echo-time spiral projection imaging using golden-angle: A flexible protocol for in vivo mouse imaging at high magnetic field.

    Science.gov (United States)

    Castets, Charles R; Lefrançois, William; Wecker, Didier; Ribot, Emeline J; Trotier, Aurélien J; Thiaudière, Eric; Franconi, Jean-Michel; Miraux, Sylvain

    2017-05-01

    To develop a fast three-dimensional (3D) k-space encoding method based on spiral projection imaging (SPI) with an interleaved golden-angle approach and to validate this novel sequence on small animal models. A disk-like trajectory, in which each disk contained spirals, was developed. The 3D encoding was performed by tilting the disks with a golden angle. The sharpness was first calculated at different T2* values. Then, the sharpness was measured on phantom using variable undersampling ratios. Finally, the sampling method was validated by whole brain time-of-flight angiography and ultrasmall superparamagnetic iron oxide (USPIO) enhanced free-breathing liver angiography on mouse. The in vitro results demonstrated the robustness of the method for short T2* and high undersampling ratios. In vivo experiments showed the ability to properly detect small vessels in the brain with an acquisition time shorter than 1 min. Free-breathing mice liver angiography showed the insensitivity of this protocol toward motions and flow artifacts, and enabled the visualization of liver motion during breathing. The method implemented here allowed fast 3D k-space sampling with a high undersampling ratio. Combining the advantages of center-out spirals with the flexibility of the golden angle approach could have major implications for real-time imaging. Magn Reson Med 77:1831-1840, 2017. © 2016 International Society for Magnetic Resonance in Medicine. © 2016 International Society for Magnetic Resonance in Medicine.

  19. Real-time quantitative phase reconstruction in off-axis digital holography using multiplexing.

    Science.gov (United States)

    Girshovitz, Pinhas; Shaked, Natan T

    2014-04-15

    We present a new approach for obtaining significant speedup in the digital processing of extracting unwrapped phase profiles from off-axis digital holograms. The new technique digitally multiplexes two orthogonal off-axis holograms, where the digital reconstruction, including spatial filtering and two-dimensional phase unwrapping on a decreased number of pixels, can be performed on both holograms together, without redundant operations. Using this technique, we were able to reconstruct, for the first time to our knowledge, unwrapped phase profiles from off-axis holograms with 1 megapixel in more than 30 frames per second using a standard single-core personal computer on a MATLAB platform, without using graphic-processing-unit programming or parallel computing. This new technique is important for real-time quantitative visualization and measurements of highly dynamic samples and is applicable for a wide range of applications, including rapid biological cell imaging and real-time nondestructive testing. After comparing the speedups obtained by the new technique for holograms of various sizes, we present experimental results of real-time quantitative phase visualization of cells flowing rapidly through a microchannel.

  20. The effects of object activity distribution on multiplexing multi-pinhole SPECT

    Energy Technology Data Exchange (ETDEWEB)

    Mok, Greta S P [Department of Electrical and Electronics Engineering, Faculty of Science and Technology, University of Macau, Taipa, Macau (China); Tsui, Benjamin M W [Division of Medical Imaging Physics, Department of Radiology, Johns Hopkins Medical Institutions, Baltimore, MD 21287 (United States); Beekman, Freek J, E-mail: gretamok@umac.m [Section Radiation Detection and Medical Imaging, Faculty of Applied Sciences, Delft University of Technology, 2629JB Delft (Netherlands)

    2011-04-21

    We aim to study the effects of activity distribution for multiplexing multi-pinhole (MPH) SPECT. Three digital phantoms, including a hot rod, a cold rod and a cold sphere phantom, were used. Different degrees of multiplexing were obtained by (i) adjusting the MPH pattern for the same 4-pinhole collimator (scheme 1) and (ii) increasing the number of pinholes (scheme 2). Noise-free and noisy projections were generated using a 3D analytical MPH projector based on the same acquisition time. Projections were reconstructed using OS-EM without resolution recovery. Normalized mean-square-error (NMSE), noise, image profiles and signal-to-background ratios (SBR) were assessed. For the hot rod phantom, the NMSE-noise trade-offs slightly improves for multiplexing designs in scheme 2. Substantial artifacts were observed and the NMSE-noise trade-offs slightly worsened for multiplexing designs for the cold phantoms. Resolutions slightly degraded for higher degrees of multiplexing ({approx}39-65%) for the cold rod phantom. For the cold sphere phantom, image profiles showed non-multiplexing designs better emulated the phantom, while {approx}20% multiplexing performs similarly as compared to non-multiplexing in SBR. Our results indicate that multiplexing can help for sparse objects but leads to a significant image degradation in non-sparse distributions. Since many tracers are not highly specific, and the gain of detection efficiency by allowing multiplexing is fairly offset by image degradations, multiplexing needs to be kept to a minimum for optimum MPH collimator designs.

  1. Time-multiplexed structured illumination using a DMD for optical diffraction tomography

    Science.gov (United States)

    Lee, KyeoReh; Kim, Kyoohyun; Kim, Geon; Shin, Seungwoo; Park, YongKeun

    2017-03-01

    We present a novel illumination control technique for optical diffraction tomography (ODT). Various spatial frequencies of beam illumination were controlled by displaying time-averaged sinusoidal patterns using a digital micromirror device (DMD). Compared to the previous method using binary Lee holograms, the present method eliminates unwanted diffracted beams which may deteriorate the image quality of the ODT. We demonstrated the capability of the present method by reconstructing three-dimensional refractive index (RI) distributions of various samples, with high RI sensitivity (\\sigma_\\Delta n = 3.15 +/- 10-4), and reconstructing 3-D RI tomograms of biological samples, which provided quantitative biochemical and morphological information about the samples.

  2. Evaluation of a multiplex real-time PCR assay for the detection of respiratory viruses in clinical specimens.

    Science.gov (United States)

    Rheem, Insoo; Park, Joowon; Kim, Tae-Hyun; Kim, Jong Wan

    2012-11-01

    In this study, we evaluated the analytical performance and clinical potential of a one-step multiplex real-time PCR assay for the simultaneous detection of 14 types of respiratory viruses using the AdvanSure RV real-time PCR Kit (LG Life Sciences, Korea). Three hundred and twenty clinical specimens were tested with the AdvanSure RV real-time PCR Kit and conventional multiplex reverse transcription (RT)-PCR assay. The assay results were analyzed and the one-step AdvanSure RV real-time PCR Kit was compared with the conventional multiplex RT-PCR assay with respect to the sensitivity and specificity of the detection of respiratory viruses. The limit of detection (LOD) was 1.31 plaque-forming units (PFU)/mL for human rhinoviruses (hRVs), 4.93 PFU/mL for human coronavirus HCoV-229E/NL63, 2.67 PFU/mL for human coronavirus HCoV-OC43, 18.20 PFU/mL for parainfluenza virus 1 (PIV)-1, 24.57 PFU/mL for PIV-2, 1.73 PFU/mL for PIV-3, 1.79 PFU/mL for influenza virus group (Flu) A, 59.51 PFU/mL for FluB, 5.46 PFU/mL for human respiratory syncytial virus (hRSV)-A, 17.23 PFU/mL for hRSV-B, 9.99 PFU/mL for human adenovirus (ADVs). The cross-reactivity test for this assay against 23 types of non-respiratory viruses showed negative results for all viruses tested. The agreement between the one-step AdvanSure multiplex real-time PCR assay and the conventional multiplex RT-PCR assay was 98%. The one-step AdvanSure RV multiplex real-time PCR assay is a simple assay with high potential for specific, rapid and sensitive laboratory diagnosis of respiratory viruses compared to conventional multiplex RT-PCR.

  3. A one-step real-time multiplex PCR for screening Y-chromosomal microdeletions without downstream amplicon size analysis.

    Directory of Open Access Journals (Sweden)

    Viviana Kozina

    Full Text Available BACKGROUND: Y-chromosomal microdeletions (YCMD are one of the major genetic causes for non-obstructive azoospermia. Genetic testing for YCMD by multiplex polymerase chain reaction (PCR is an established method for quick and robust screening of deletions in the AZF regions of the Y-chromosome. Multiplex PCRs have the advantage of including a control gene in every reaction and significantly reducing the number of reactions needed to screen the relevant genomic markers. PRINCIPAL FINDINGS: The widely established "EAA/EMQN best practice guidelines for molecular diagnosis of Y-chromosomal microdeletions (2004" were used as a basis for designing a real-time multiplex PCR system, in which the YCMD can simply be identified by their melting points. For this reason, some AZF primers were substituted by primers for regions in their genomic proximity, and the ZFX/ZFY control primer was exchanged by the AMELX/AMELY control primer. Furthermore, we substituted the classical SybrGreen I dye by the novel and high-performing DNA-binding dye EvaGreen™ and put substantial effort in titrating the primer combinations in respect to optimal melting peak separation and peak size. SIGNIFICANCE: With these changes, we were able to develop a platform-independent and robust real-time based multiplex PCR, which makes the need for amplicon identification by electrophoretic sizing expendable. By using an open-source system for real-time PCR analysis, we further demonstrate the applicability of automated melting point and YCMD detection.

  4. 3D Surgical Simulation

    Science.gov (United States)

    Cevidanes, Lucia; Tucker, Scott; Styner, Martin; Kim, Hyungmin; Chapuis, Jonas; Reyes, Mauricio; Proffit, William; Turvey, Timothy; Jaskolka, Michael

    2009-01-01

    This paper discusses the development of methods for computer-aided jaw surgery. Computer-aided jaw surgery allows us to incorporate the high level of precision necessary for transferring virtual plans into the operating room. We also present a complete computer-aided surgery (CAS) system developed in close collaboration with surgeons. Surgery planning and simulation include construction of 3D surface models from Cone-beam CT (CBCT), dynamic cephalometry, semi-automatic mirroring, interactive cutting of bone and bony segment repositioning. A virtual setup can be used to manufacture positioning splints for intra-operative guidance. The system provides further intra-operative assistance with the help of a computer display showing jaw positions and 3D positioning guides updated in real-time during the surgical procedure. The CAS system aids in dealing with complex cases with benefits for the patient, with surgical practice, and for orthodontic finishing. Advanced software tools for diagnosis and treatment planning allow preparation of detailed operative plans, osteotomy repositioning, bone reconstructions, surgical resident training and assessing the difficulties of the surgical procedures prior to the surgery. CAS has the potential to make the elaboration of the surgical plan a more flexible process, increase the level of detail and accuracy of the plan, yield higher operative precision and control, and enhance documentation of cases. Supported by NIDCR DE017727, and DE018962 PMID:20816308

  5. 3D multi-slab diffusion-weighted readout-segmented EPI with real-time cardiac-reordered K-space acquisition.

    Science.gov (United States)

    Frost, Robert; Miller, Karla L; Tijssen, Rob H N; Porter, David A; Jezzard, Peter

    2014-12-01

    The aim of this study was to develop, implement, and demonstrate a three-dimensional (3D) extension of the readout-segmented echo-planar imaging (rs-EPI) sequence for diffusion imaging. Potential k-space acquisition schemes were assessed by simulating their associated spatial point spread functions. Motion-induced phase artifacts were also simulated to test navigator corrections and a real-time reordering of the k-space acquisition relative to the cardiac cycle. The cardiac reordering strategy preferentially chooses readout segments closer to the center of 3D k-space during diastole. Motion-induced phase artifacts were quantified by calculating the voxel-wise temporal variation in a set of repeated diffusion-weighted acquisitions. Based on the results of these simulations, a 2D navigated multi-slab rs-EPI sequence with real-time cardiac reordering was implemented. The multi-slab implementation enables signal-to-noise ratio-optimal repetition times of 1-2 s. Cardiac reordering was validated in simulations and in vivo using the multi-slab rs-EPI sequence. In comparisons with standard k-space acquisitions, cardiac reordering was shown to reduce the variability due to motion-induced phase artifacts by 30-50%. High-resolution diffusion tensor imaging data acquired with the cardiac-reordered multi-slab rs-EPI sequence are presented. A 3D multi-slab rs-EPI sequence with cardiac reordering has been demonstrated in vivo and is shown to provide high-quality 3D diffusion-weighted data sets. © 2013 Wiley Periodicals, Inc.

  6. Improving the Sequential Time Perception of Teenagers with Mild to Moderate Mental Retardation with 3D Immersive Virtual Reality (IVR)

    Science.gov (United States)

    Passig, David

    2009-01-01

    Children with mental retardation have pronounced difficulties in using cognitive strategies and comprehending abstract concepts--among them, the concept of sequential time (Van-Handel, Swaab, De-Vries, & Jongmans, 2007). The perception of sequential time is generally tested by using scenarios presenting a continuum of actions. The goal of this…

  7. Intensive wave power and steel quenching 3-D model for cylindrical sample. Time direct and reverse formulations and solutions

    Directory of Open Access Journals (Sweden)

    Buikis Andris

    2017-01-01

    Full Text Available In this paper we develop mathematical models for three dimensional hyperbolic heat equations (wave equation or telegraph equation with inner source power and construct their analytical solutions for the determination of the initial heat flux for cylindrical sample. As additional conditions the temperature and heat flux at the end time are given. In some cases we give expression of wave energy. In some cases we give expression of wave energy. Some solutions of time inverse problems are obtained in the form of first kind Fredholm integral equation, but others has been obtained in closed analytical form as series. We viewed both direct and inverse problems at the time. For the time inverse problem we use inversion in the time argument.

  8. Which is the ideal point of time to perform intraoperative 3D imaging in dorsal stabilisation of thoracolumbar spine fractures? A matched pair analysis.

    Science.gov (United States)

    Beck, M; Mittlmeier, T; Gierer, P; Rotter, R; Harms, C; Gradl, G

    2010-10-01

    After dorsal stabilisation of vertebral fractures by an internal fixateur the postoperative computed tomography is a standard procedure to control the positions of the pedicle screws, the success of the reposition, the clearance of the spinal canal and to plane an additive secondary ventral stabilisation. An intraoperative scan with a 3D image intensifier may clarify these questions directly after the implantation with the possibility of an immediate correction of the implants. The aim of this study was to find out the optimal point of time to perform an intraoperative 3D scan and if a postoperative computed tomography is dispensable. Intraoperative 3D scans were carried out on 33 patients with thoracolumbar spine fractures (T11-L5) after bi-segmental fixateur interne montage (Group 1). A matched pair group of 33 patients (Group 2) with a 3D scan after implantation of pedicle screws was built. A postoperative computed tomography of the instrumented spinal section was done in all patients. The following measurements were done in sagittal and axial reconstruction planes and were compared: classification of screw positions, maximal axial diameter of pedicles, cortical perforation of the screws. Additionally in Group 1 the distance between the upper and lower end plates of the injured section, the height of posterior vertebral body wall, the dislocation of the posterior wall and the minimal diameter of the spinal canal were measured. The intraoperative scoring of pedicle screws positions and the measurement of pedicle width showed in both groups a significant accordance with the computed tomography determinations. The measurements "posterior wall dislocation" and "diameter of spinal canal" were only possible in 24 3D scans and showed a significant difference compared with the CT data. The picture quality in Group 2 was scored significantly better than for Group 1 with the complete assembly of the fixateur. The ideal point of time for an intraoperative 3D imaging with

  9. RAPID COMMUNICATION: A novel time frequency-based 3D Lissajous figure method and its application to the determination of oxygen saturation from the photoplethysmogram

    Science.gov (United States)

    Addison, Paul S.; Watson, James N.

    2004-11-01

    We present a novel time-frequency method for the measurement of oxygen saturation using the photoplethysmogram (PPG) signals from a standard pulse oximeter machine. The method utilizes the time-frequency transformation of the red and infrared PPGs to derive a 3D Lissajous figure. By selecting the optimal Lissajous, the method provides an inherently robust basis for the determination of oxygen saturation as regions of the time-frequency plane where high- and low-frequency signal artefacts are to be found are automatically avoided.

  10. Development of capacitive multiplexing circuit for SiPM-based time-of-flight (TOF) PET detector.

    Science.gov (United States)

    Choe, Hyeok-Jun; Choi, Yong; Hu, Wei; Yan, Jianhua; Ho Jung, Jin

    2017-04-07

    There has been great interest in developing a time-of-flight (TOF) PET to improve the signal-to-noise ratio of PET image relative to that of non-TOF PET. Silicon photomultiplier (SiPM) arrays have attracted attention for use as a fast TOF PET photosensor. Since numerous SiPM arrays are needed to construct a modern human PET, a multiplexing method providing both good timing performance and high channel reduction capability is required to develop a SiPM-based TOF PET. The purpose of this study was to develop a capacitive multiplexing circuit for the SiPM-based TOF PET. The proposed multiplexing circuit was evaluated by measuring the coincidence resolving time (CRT) and the energy resolution as a function of the overvoltage using three different capacitor values of 15, 30, and 51 pF. A flood histogram was also obtained and quantitatively assessed. Experiments were performed using a [Formula: see text] array of [Formula: see text] mm 2 SiPMs. Regarding the capacitor values, the multiplexing circuit using a smaller capacitor value showed the best timing performance. On the other hand, the energy resolution and flood histogram quality of the multiplexing circuit deteriorated as the capacitor value became smaller. The proposed circuit was able to achieve a CRT of [Formula: see text] ps FWHM and an energy resolution of 17.1[Formula: see text] with a pair of [Formula: see text] mm 3 LYSO crystals using a capacitor value of 30 pF at an overvoltage of 3.0 V. It was also possible to clearly resolve a [Formula: see text] array of LYSO crystals in the flood histogram using the multiplexing circuit. The experiment results indicate that the proposed capacitive multiplexing circuit is useful to obtain an excellent timing performance and a crystal-resolving capability in the flood histogram with a minimal degradation of the energy resolution, as well as to reduce the number of the readout channels of the SiPM-based TOF PET detector.

  11. Reorganization of the 3D matrix of polyelectrolytes complexes of chitosan/chondroitin sulfate swollen in different conditions of pH and immersion time

    International Nuclear Information System (INIS)

    Fajardo, Andre R.; Piai, Juliana F.; Rubira, Adley F.; Muniz, Edvani C.

    2009-01-01

    The chitosan (CT), a polysaccharide that has excellent properties for use as biomaterials, shows cationic nature and properties of high charge density in acidic solutions, thus CT can form complex polyelectrolyte (PEC) with polyanionic moieties such as the chondroitin sulfate (CS), a key component of cartilage matrix. We studied the reorganization of chains on 3D matrix of CT/CS PEC at swollen state in different conditions of pH and immersion time. It was verified that this PEC (QT/CS) has the capacity to reorganize its 3D matrix but it depends of the pH of the medium in which it is swelled and the time that remains immersed. The reorganization of the 3D matrix is caused by the reordering of the chains forming the PEC after the release of the CS, that occurs mainly at pH values higher than or close to the pKa of CT (pKa CT) . Such reorganization was detected by X-ray diffraction profiles and allows an increase in crystallinity, thermal stability and pore size of the PEC. This shows that the PEC produced can be processed to suit its use as bio material, applied i.e. as drugs release devices. (author)

  12. Dedicated front-end and readout electronics developments for real time 3D directional detection of dark matter with MIMAC

    OpenAIRE

    Bourrion, O.; Bosson, G.; Grignon, C.; Richer, J. P.; Guillaudin, O.; Mayet, F.; Billard, J.; Santos, D.

    2011-01-01

    A complete dedicated electronics, from front-end to back-end, was developed to instrument a MIMAC prototype. A front end ASIC able to monitor 64 strips of pixels and to provide their individual "Time Over Threshold" information has been designed. An associated acquisition electronics and a real time track reconstruction software have been developed to monitor a 512 channel prototype. This auto-triggered electronic uses embedded processing to reduce the data transfer to its useful part only, i...

  13. pySeismicFMM: Python based Travel Time Calculation in Regular 2D and 3D Grids in Cartesian and Geographic Coordinates using Fast Marching Method

    Science.gov (United States)

    Wilde-Piorko, M.; Polkowski, M.

    2016-12-01

    Seismic wave travel time calculation is the most common numerical operation in seismology. The most efficient is travel time calculation in 1D velocity model - for given source, receiver depths and angular distance time is calculated within fraction of a second. Unfortunately, in most cases 1D is not enough to encounter differentiating local and regional structures. Whenever possible travel time through 3D velocity model has to be calculated. It can be achieved using ray calculation or time propagation in space. While single ray path calculation is quick it is complicated to find the ray path that connects source with the receiver. Time propagation in space using Fast Marching Method seems more efficient in most cases, especially when there are multiple receivers. In this presentation final release of a Python module pySeismicFMM is presented - simple and very efficient tool for calculating travel time from sources to receivers. Calculation requires regular 2D or 3D velocity grid either in Cartesian or geographic coordinates. On desktop class computer calculation speed is 200k grid cells per second. Calculation has to be performed once for every source location and provides travel time to all receivers. pySeismicFMM is free and open source. Development of this tool is a part of authors PhD thesis. Source code of pySeismicFMM will be published before Fall Meeting. National Science Centre Poland provided financial support for this work via NCN grant DEC-2011/02/A/ST10/00284.

  14. tavg3_3d_chm_Ne: MERRA Chem 3D IAU C-Grid Edge Mass Flux, Time Average 3-Hourly 0.667 x 0.5 degree V5.2.0 (MAT3NECHM) at GES DISC

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3NECHM or tavg3_3d_chm_Ne data product is the MERRA Data Assimilation System Chemistry 3-Dimensional chemistry on layer Edges that is time averaged, 3D model...

  15. Refined 3d-3d correspondence

    Science.gov (United States)

    Alday, Luis F.; Genolini, Pietro Benetti; Bullimore, Mathew; van Loon, Mark

    2017-04-01

    We explore aspects of the correspondence between Seifert 3-manifolds and 3d N = 2 supersymmetric theories with a distinguished abelian flavour symmetry. We give a prescription for computing the squashed three-sphere partition functions of such 3d N = 2 theories constructed from boundary conditions and interfaces in a 4d N = 2∗ theory, mirroring the construction of Seifert manifold invariants via Dehn surgery. This is extended to include links in the Seifert manifold by the insertion of supersymmetric Wilson-'t Hooft loops in the 4d N = 2∗ theory. In the presence of a mass parameter cfor the distinguished flavour symmetry, we recover aspects of refined Chern-Simons theory with complex gauge group, and in particular construct an analytic continuation of the S-matrix of refined Chern-Simons theory.

  16. Arrayed beam steering device for advanced 3D displays

    Science.gov (United States)

    Bae, Jungmok; Choi, Yoon-Sun; Choi, Kyuhwan; Kim, Yunhee; Kwon, Yongjoo; Song, Hoon; Kim, Eoksu; Choi, Seungyeol; Lee, Junghoon; Lee, Sangyoon

    2013-03-01

    An arrayed beam steering device enables much simplified system architectures for high quality multiview 3D displays by adapting time multiplexing and eye tracking scheme. An array device consisting of microscale liquid prisms is presented, where the prism surface between two immiscible liquids is electrically controlled to steer light beams by the principle of electrowetting. An array prototype with 280×280μm pixels was fabricated and demonstrated of its full optical performances. The maximum tilting angle of each prism was measured to be 22.5° in average, with a tracking resolution of less than 0.04°. In this paper, we report a design and fabrication of eletrowetting based prism array, opto-fluidic simulations, optical characterizations, as well as applications to achieve low fatigue 3D displays.

  17. Lagrangian finite element method for 3D time-dependent non-isothermal flow of K-BKZ fluids

    DEFF Research Database (Denmark)

    Román Marín, José Manuel; Rasmussen, Henrik K.

    2009-01-01

    A new numerical approach for the simulation of non-isothermal three-dimensional time-dependent flow of viscoelastic fluids is presented. The viscoelastic fluids are of the K-BKZ integral type and the method is based on a Lagrangian kinematics description of the fluid flow. The K-BKZ fluid...... is assumed to be a thermorheological simple material using the extended Morland and Lee hypothesis by Crochet and Naghdi [M.J. Crochet, P.M. Naghdi, A class of non-isothermal viscoelastic fluids, International Journal of Engineering Science 10 (1972) 755–800], where the real time in the K-BKZ constitutive...

  18. A 3d-3d appetizer

    Energy Technology Data Exchange (ETDEWEB)

    Pei, Du; Ye, Ke [Walter Burke Institute for Theoretical Physics, California Institute of Technology, Pasadena, CA, 91125 (United States)

    2016-11-02

    We test the 3d-3d correspondence for theories that are labeled by Lens spaces. We find a full agreement between the index of the 3d N=2 “Lens space theory” T[L(p,1)] and the partition function of complex Chern-Simons theory on L(p,1). In particular, for p=1, we show how the familiar S{sup 3} partition function of Chern-Simons theory arises from the index of a free theory. For large p, we find that the index of T[L(p,1)] becomes a constant independent of p. In addition, we study T[L(p,1)] on the squashed three-sphere S{sub b}{sup 3}. This enables us to see clearly, at the level of partition function, to what extent G{sub ℂ} complex Chern-Simons theory can be thought of as two copies of Chern-Simons theory with compact gauge group G.

  19. Time-dependent hydrogen ionisation in 3D simulations of the solar chromosphere. Methods and first results

    NARCIS (Netherlands)

    Leenaarts, J.; Wedemeyer-Bohm, S.

    2006-01-01

    Context. The hydrogen ionisation degree deviates substantially from statistical equilibrium under the conditions of the solar chromosphere. A realistic description of this atmospheric layer thus must account for time-dependent non-equilibrium effects. Aims. Advancing the realism of numerical

  20. On large-time energy concentration in solutions to the Navier-Stokes equations in the whole 3D space

    Czech Academy of Sciences Publication Activity Database

    Skalák, Zdeněk

    2012-01-01

    Roč. 92, č. 10 (2012), s. 801-815 ISSN 0044-2267 R&D Projects: GA AV ČR IAA200600801 Institutional research plan: CEZ:AV0Z20600510 Keywords : Navier-Stokes equations * large-time behavior of solutions * energy concentration Subject RIV: BA - General Mathematics Impact factor: 0.948, year: 2012

  1. Multiplex recording of cellular events over time on CRISPR biological tape.

    Science.gov (United States)

    Sheth, Ravi U; Yim, Sung Sun; Wu, Felix L; Wang, Harris H

    2017-12-15

    Although dynamics underlie many biological processes, our ability to robustly and accurately profile time-varying biological signals and regulatory programs remains limited. Here we describe a framework for storing temporal biological information directly in the genomes of a cell population. We developed a "biological tape recorder" in which biological signals trigger intracellular DNA production that is then recorded by the CRISPR-Cas adaptation system. This approach enables stable recording over multiple days and accurate reconstruction of temporal and lineage information by sequencing CRISPR arrays. We further demonstrate a multiplexing strategy to simultaneously record the temporal availability of three metabolites (copper, trehalose, and fucose) in the environment of a cell population over time. This work enables the temporal measurement of dynamic cellular states and environmental changes and suggests new applications for chronicling biological events on a large scale. Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

  2. Multiplexing topologies and time scales: The gains and losses of synchrony

    Science.gov (United States)

    Makovkin, Sergey; Kumar, Anil; Zaikin, Alexey; Jalan, Sarika; Ivanchenko, Mikhail

    2017-11-01

    Inspired by the recent interest in collective dynamics of biological neural networks immersed in the glial cell medium, we investigate the frequency and phase order, i.e., Kuramoto type of synchronization in a multiplex two-layer network of phase oscillators of different time scales and topologies. One of them has a long-range connectivity, exemplified by the Erdős-Rényi random network, and supports both kinds of synchrony. The other is a locally coupled two-dimensional lattice that can reach frequency synchronization but lacks phase order. Drastically different layer frequencies disentangle intra- and interlayer synchronization. We find that an indirect but sufficiently strong coupling through the regular layer can induce both phase order in the originally nonsynchronized random layer and global order, even when an isolated regular layer does not manifest it in principle. At the same time, the route to global synchronization is complex: an initial onset of (partial) synchrony in the regular layer, when its intra- and interlayer coupling is increased, provokes the loss of synchrony even in the originally synchronized random layer. Ultimately, a developed asynchronous dynamics in both layers is abruptly taken over by the global synchrony of both kinds.

  3. Multiplex real-time PCR for detection of Campylobacter, Salmonella, and Shigella.

    Science.gov (United States)

    Barletta, F; Mercado, E H; Lluque, A; Ruiz, J; Cleary, T G; Ochoa, T J

    2013-09-01

    Infectious diarrhea can be classified based on its clinical presentation as noninflammatory or inflammatory disease. In developing countries, among inflammatory diarrhea cases, Shigella is the most common cause, followed by Campylobacter and Salmonella. Because the time frame in which treatment choices must be made is short and conventional stool cultures lack good sensitivity, there is a need for a rapid, sensitive, and inexpensive detection technique. The purpose of our study was to develop a multiplex real-time PCR procedure to simultaneously identify Campylobacter spp., Salmonella spp., and Shigella spp. Primers were designed to amplify the invA, ipaH, and 16S rRNA genes simultaneously in a single reaction to detect Salmonella, Shigella, and Campylobacter, respectively. Using this approach, we correctly identified 102 of 103 strains of the targeted enteropathogens and 34 of 34 other pathogens. The melting temperatures were 82.96 ± 0.05 °C for invA, 85.56 ± 0.28 °C for ipaH, and 89.21 ± 0.24 °C for 16S rRNA. The limit of accurate quantification for the assay in stool samples was 10(4) CFU g(-1); however, the limit of detection was 10(3) CFU g(-1). This assay is a simple, rapid, inexpensive, and reliable system for the practical detection of these three enteropathogens in clinical specimens.

  4. A two-level space-time color-coding method for 3D measurements using structured light

    International Nuclear Information System (INIS)

    Xue, Qi; Wang, Zhao; Huang, Junhui; Gao, Jianmin; Qi, Zhaoshuai

    2015-01-01

    Color-coding methods have significantly improved the measurement efficiency of structured light systems. However, some problems, such as color crosstalk and chromatic aberration, decrease the measurement accuracy of the system. A two-level space-time color-coding method is thus proposed in this paper. The method, which includes a space-code level and a time-code level, is shown to be reliable and efficient. The influence of chromatic aberration is completely mitigated when using this method. Additionally, a self-adaptive windowed Fourier transform is used to eliminate all color crosstalk components. Theoretical analyses and experiments have shown that the proposed coding method solves the problems of color crosstalk and chromatic aberration effectively. Additionally, the method guarantees high measurement accuracy which is very close to the measurement accuracy using monochromatic coded patterns. (paper)

  5. Development of a 3D circular microfluidic centrifuge for the separation of mixed particles by using their different centrifuge times

    International Nuclear Information System (INIS)

    Jeon, H J; Kim, D I; Kim, M J; Nguyen, X D; Park, D H; Go, J S

    2015-01-01

    This paper presents a circular microfluidic centrifuge with two inlets and two outlets to separate mixed microparticles with a specially designed sample injection hole. To separate the mixed particles, it uses a rotational flow, generated in a chamber by counter primary flows in the microchannels. The shape and sizes of the circular microfluidic centrifuge have been designed through numerical evaluation to have a large relative centrifugal force. The difference of centrifuge times of the mixed particles of 1 μm and 6 μm was determined to be 8.2 s at an inlet Reynolds number of 500 and a sample Reynolds number of 20. In the experiment, this was measured to be about 10 s. From the separation of the two polymer particles analogous to the representative sizes of platelets and red blood cells, the circular microfluidic centrifuge shows a potential to separate human blood cells size-selectively by using the difference of centrifuge times. (paper)

  6. TART 2000 A Coupled Neutron-Photon, 3-D, Combinatorial Geometry, Time Dependent, Monte Carlo Transport Code

    CERN Document Server

    Cullen, D

    2000-01-01

    TART2000 is a coupled neutron-photon, 3 Dimensional, combinatorial geometry, time dependent Monte Carlo radiation transport code. This code can run on any modern computer. It is a complete system to assist you with input Preparation, running Monte Carlo calculations, and analysis of output results. TART2000 is also incredibly FAST; if you have used similar codes, you will be amazed at how fast this code is compared to other similar codes. Use of the entire system can save you a great deal of time and energy. TART2000 is distributed on CD. This CD contains on-line documentation for all codes included in the system, the codes configured to run on a variety of computers, and many example problems that you can use to familiarize yourself with the system. TART2000 completely supersedes all older versions of TART, and it is strongly recommended that users only use the most recent version of TART2000 and its data files.

  7. A time-space synchronization of coherent Doppler scanning lidars for 3D measurements of wind fields

    DEFF Research Database (Denmark)

    Vasiljevic, Nikola

    This thesis consists of the results of a Ph.D. study that was focused on the development of the system of three time-space synchronized pulsed coherent Doppler scanning lidars, which are coordinated by a remote ’master computer’. This system has the unique capability to measure a complete three...... synchronization and time control of the emission, steering and acquisition were achieved, resulting that the complete lidar measurement process is controlled from the single hardware component. The system was formed using a novel approach, in which the master computer simultaneously coordinates the remote lidars...... through a UDP/IP and TCP/IP network by exchange of network packets. Since the size of the packets is roughly 1 kB, this approach allows an uninterrupted and fast coordination of the lidars, even in the case of mobile networks such as GSM. With this approach a maximum lag of 10 ms was observed in terms...

  8. TART 2000: A Coupled Neutron-Photon, 3-D, Combinatorial Geometry, Time Dependent, Monte Carlo Transport Code

    International Nuclear Information System (INIS)

    Cullen, D.E

    2000-01-01

    TART2000 is a coupled neutron-photon, 3 Dimensional, combinatorial geometry, time dependent Monte Carlo radiation transport code. This code can run on any modern computer. It is a complete system to assist you with input Preparation, running Monte Carlo calculations, and analysis of output results. TART2000 is also incredibly FAST; if you have used similar codes, you will be amazed at how fast this code is compared to other similar codes. Use of the entire system can save you a great deal of time and energy. TART2000 is distributed on CD. This CD contains on-line documentation for all codes included in the system, the codes configured to run on a variety of computers, and many example problems that you can use to familiarize yourself with the system. TART2000 completely supersedes all older versions of TART, and it is strongly recommended that users only use the most recent version of TART2000 and its data files

  9. A Sparsity-Based Approach to 3D Binaural Sound Synthesis Using Time-Frequency Array Processing

    Science.gov (United States)

    Cobos, Maximo; Lopez, JoseJ; Spors, Sascha

    2010-12-01

    Localization of sounds in physical space plays a very important role in multiple audio-related disciplines, such as music, telecommunications, and audiovisual productions. Binaural recording is the most commonly used method to provide an immersive sound experience by means of headphone reproduction. However, it requires a very specific recording setup using high-fidelity microphones mounted in a dummy head. In this paper, we present a novel processing framework for binaural sound recording and reproduction that avoids the use of dummy heads, which is specially suitable for immersive teleconferencing applications. The method is based on a time-frequency analysis of the spatial properties of the sound picked up by a simple tetrahedral microphone array, assuming source sparseness. The experiments carried out using simulations and a real-time prototype confirm the validity of the proposed approach.

  10. A Sparsity-Based Approach to 3D Binaural Sound Synthesis Using Time-Frequency Array Processing

    Directory of Open Access Journals (Sweden)

    Spors Sascha

    2010-01-01

    Full Text Available Localization of sounds in physical space plays a very important role in multiple audio-related disciplines, such as music, telecommunications, and audiovisual productions. Binaural recording is the most commonly used method to provide an immersive sound experience by means of headphone reproduction. However, it requires a very specific recording setup using high-fidelity microphones mounted in a dummy head. In this paper, we present a novel processing framework for binaural sound recording and reproduction that avoids the use of dummy heads, which is specially suitable for immersive teleconferencing applications. The method is based on a time-frequency analysis of the spatial properties of the sound picked up by a simple tetrahedral microphone array, assuming source sparseness. The experiments carried out using simulations and a real-time prototype confirm the validity of the proposed approach.

  11. Visual simultaneous localization and mapping (VSLAM) methods applied to indoor 3D topographical and radiological mapping in real-time

    International Nuclear Information System (INIS)

    Hautot, F.; Dubart, P.; Chagneau, B.; Bacri, C.O.; Abou-Khalil, R.

    2017-01-01

    New developments in the field of robotics and computer vision enable to merge sensors to allow fast real-time localization of radiological measurements in the space/volume with near real-time radioactive sources identification and characterization. These capabilities lead nuclear investigations to a more efficient way for operators' dosimetry evaluation, intervention scenarios and risks mitigation and simulations, such as accidents in unknown potentially contaminated areas or during dismantling operations. This paper will present new progresses in merging RGB-D camera based on SLAM (Simultaneous Localization and Mapping) systems and nuclear measurement in motion methods in order to detect, locate, and evaluate the activity of radioactive sources in 3-dimensions

  12. Visual Simultaneous Localization And Mapping (VSLAM) methods applied to indoor 3D topographical and radiological mapping in real-time

    Science.gov (United States)

    Hautot, Felix; Dubart, Philippe; Bacri, Charles-Olivier; Chagneau, Benjamin; Abou-Khalil, Roger

    2017-09-01

    New developments in the field of robotics and computer vision enables to merge sensors to allow fast realtime localization of radiological measurements in the space/volume with near-real time radioactive sources identification and characterization. These capabilities lead nuclear investigations to a more efficient way for operators' dosimetry evaluation, intervention scenarii and risks mitigation and simulations, such as accidents in unknown potentially contaminated areas or during dismantling operations

  13. Real-time 3-D hybrid simulation of Titan's plasma interaction during a solar wind excursion

    Directory of Open Access Journals (Sweden)

    S. Simon

    2009-09-01

    Full Text Available The plasma environment of Saturn's largest satellite Titan is known to be highly variable. Since Titan's orbit is located within the outer magnetosphere of Saturn, the moon can leave the region dominated by the magnetic field of its parent body in times of high solar wind dynamic pressure and interact with the thermalized magnetosheath plasma or even with the unshocked solar wind. By applying a three-dimensional hybrid simulation code (kinetic description of ions, fluid electrons, we study in real-time the transition that Titan's plasma environment undergoes when the moon leaves Saturn's magnetosphere and enters the supermagnetosonic solar wind. In the simulation, the transition between both plasma regimes is mimicked by a reversal of the magnetic field direction as well as a change in the composition and temperature of the impinging plasma flow. When the satellite enters the solar wind, the magnetic draping pattern in its vicinity is reconfigured due to reconnection, with the characteristic time scale of this process being determined by the convection of the field lines in the undisturbed plasma flow at the flanks of the interaction region. The build-up of a bow shock ahead of Titan takes place on a typical time scale of a few minutes as well. We also analyze the erosion of the newly formed shock front upstream of Titan that commences when the moon re-enters the submagnetosonic plasma regime of Saturn's magnetosphere. Although the model presented here is far from governing the full complexity of Titan's plasma interaction during a solar wind excursion, the simulation provides important insights into general plasma-physical processes associated with such a disruptive change of the upstream flow conditions.

  14. Finding buried metallic pipes using a non-destructive approach based on 3D time-domain induced polarization data

    Science.gov (United States)

    Shao, Zhenlu; Revil, André; Mao, Deqiang; Wang, Deming

    2018-04-01

    The location of buried utility pipes is often unknown. We use the time-domain induced polarization method to non-intrusively localize metallic pipes. A new approach, based on injecting a primary electrical current between a pair of electrodes and measuring the time-lapse voltage response on a set of potential electrodes after shutting down this primary current is used. The secondary voltage is measured on all the electrodes with respect to a single electrode used as a reference for the electrical potential, in a way similar to a self-potential time lapse survey. This secondary voltage is due to the formation of a secondary current density in the ground associated with the polarization of the metallic pipes. An algorithm is designed to localize the metallic object using the secondary voltage distribution by performing a tomography of the secondary source current density associated with the polarization of the pipes. This algorithm is first benchmarked on a synthetic case. Then, two laboratory sandbox experiments are performed with buried metallic pipes located in a sandbox filled with some clean sand. In Experiment #1, we use a horizontal copper pipe while in Experiment #2 we use an inclined stainless steel pipe. The result shows that the method is effective in localizing these two pipes. At the opposite, electrical resistivity tomography is not effective in localizing the pipes because they may appear resistive at low frequencies. This is due to the polarization of the metallic pipes which blocks the charge carriers at its external boundaries.

  15. Comparison of 'time to detection' values between BacT/ALERT VIRTUO and BacT/ALERT 3D instruments for clinical blood culture samples.

    Science.gov (United States)

    Congestrì, Francesco; Pedna, Maria Federica; Fantini, Michela; Samuelli, Michela; Schiavone, Pasqua; Torri, Arianna; Bertini, Stefania; Sambri, Vittorio

    2017-09-01

    The early detection of bacteraemia and fungemia is of paramount importance to guide antimicrobial therapy in septic patients. In this study the 'time to detection' (TTD) value for the new blood culture system BacT/ALERT VIRTUO (VIRTUO) was evaluated in 1462 positive clinical bottles and compared with the TTD for 1601 positive clinical bottles incubated in the BacT/ALERT 3D system (BTA-3D). The most representative microorganisms isolated from bottles incubated in both blood culture systems were divided into eight categories (in order of frequency): coagulase-negative staphylococci (CoNS), Escherichia coli, Enterobacteriaceae (other than E. coli), Staphylococcus aureus, Enterococcus spp, viridans group streptococci, Pseudomonas aeruginosa, and Candida spp. The comparison of TTD values for the two blood culture systems strongly indicated that growth of the first five groups listed above was detected earlier with VIRTUO than with BTA-3D (p culture system can reduce the TTD for more than 75% of isolated microorganisms. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

  16. Fully 3D list-mode time-of-flight PET image reconstruction on GPUs using CUDA.

    Science.gov (United States)

    Cui, Jing-Yu; Pratx, Guillem; Prevrhal, Sven; Levin, Craig S

    2011-12-01

    List-mode processing is an efficient way of dealing with the sparse nature of positron emission tomography (PET) data sets and is the processing method of choice for time-of-flight (ToF) PET image reconstruction. However, the massive amount of computation involved in forward projection and backprojection limits the application of list-mode reconstruction in practice, and makes it challenging to incorporate accurate system modeling. The authors present a novel formulation for computing line projection operations on graphics processing units (GPUs) using the compute unified device architecture (CUDA) framework, and apply the formulation to list-mode ordered-subsets expectation maximization (OSEM) image reconstruction. Our method overcomes well-known GPU challenges such as divergence of compute threads, limited bandwidth of global memory, and limited size of shared memory, while exploiting GPU capabilities such as fast access to shared memory and efficient linear interpolation of texture memory. Execution time comparison and image quality analysis of the GPU-CUDA method and the central processing unit (CPU) method are performed on several data sets acquired on a preclinical scanner and a clinical ToF scanner. When applied to line projection operations for non-ToF list-mode PET, this new GPU-CUDA method is >200 times faster than a single-threaded reference CPU implementation. For ToF reconstruction, we exploit a ToF-specific optimization to improve the efficiency of our parallel processing method, resulting in GPU reconstruction >300 times faster than the CPU counterpart. For a typical whole-body scan with 75 × 75 × 26 image matrix, 40.7 million LORs, 33 subsets, and 3 iterations, the overall processing time is 7.7 s for GPU and 42 min for a single-threaded CPU. Image quality and accuracy are preserved for multiple imaging configurations and reconstruction parameters, with normalized root mean squared (RMS) deviation less than 1% between CPU and GPU

  17. Acoustic and hybrid 3D-printed electrochemical biosensors for the real-time immunodetection of liver cancer cells (HepG2).

    Science.gov (United States)

    Damiati, Samar; Küpcü, Seta; Peacock, Martin; Eilenberger, Christoph; Zamzami, Mazin; Qadri, Ishtiaq; Choudhry, Hani; Sleytr, Uwe B; Schuster, Bernhard

    2017-08-15

    This study presents an efficient acoustic and hybrid three-dimensional (3D)-printed electrochemical biosensors for the detection of liver cancer cells. The biosensors function by recognizing the highly expressed tumor marker CD133, which is located on the surface of liver cancer cells. Detection was achieved by recrystallizing a recombinant S-layer fusion protein (rSbpA/ZZ) on the surface of the sensors. The fused ZZ-domain enables immobilization of the anti-CD133 antibody in a defined manner. These highly accessible anti-CD133 antibodies were employed as a sensing layer, thereby enabling the efficient detection of liver cancer cells (HepG2). The recognition of HepG2 cells was investigated in situ using a quartz crystal microbalance with dissipation monitoring (QCM-D), which enabled the label-free, real-time detection of living cells on the modified sensor surface under controlled conditions. Furthermore, the hybrid 3D additive printing strategy for biosensors facilitates both rapid development and small-scale manufacturing. The hybrid strategy of combining 3D-printed parts and more traditionally fabricated parts enables the use of optimal materials: a ceramic substrate with noble metals for the sensing element and 3D-printed capillary channels to guide and constrain the clinical sample. Cyclic voltammetry (CV) measurements confirmed the efficiency of the fabricated sensors. Most importantly, these sensors offer low-cost and disposable detection platforms for real-world applications. Thus, as demonstrated in this study, both fabricated acoustic and electrochemical sensing platforms can detect cancer cells and therefore may have further potential in other clinical applications and drug-screening studies. Copyright © 2017 Elsevier B.V. All rights reserved.

  18. Mitigating Space Weather Impacts on the Power Grid in Real-Time: Applying 3-D EarthScope Magnetotelluric Data to Forecasting Reactive Power Loss in Power Transformers

    Science.gov (United States)

    Schultz, A.; Bonner, L. R., IV

    2017-12-01

    Current efforts to assess risk to the power grid from geomagnetic disturbances (GMDs) that result in geomagnetically induced currents (GICs) seek to identify potential "hotspots," based on statistical models of GMD storm scenarios and power distribution grounding models that assume that the electrical conductivity of the Earth's crust and mantle varies only with depth. The NSF-supported EarthScope Magnetotelluric (MT) Program operated by Oregon State University has mapped 3-D ground electrical conductivity structure across more than half of the continental US. MT data, the naturally occurring time variations in the Earth's vector electric and magnetic fields at ground level, are used to determine the MT impedance tensor for each site (the ratio of horizontal vector electric and magnetic fields at ground level expressed as a complex-valued frequency domain quantity). The impedance provides information on the 3-D electrical conductivity structure of the Earth's crust and mantle. We demonstrate that use of 3-D ground conductivity information significantly improves the fidelity of GIC predictions over existing 1-D approaches. We project real-time magnetic field data streams from US Geological Survey magnetic observatories into a set of linear filters that employ the impedance data and that generate estimates of ground level electric fields at the locations of MT stations. The resulting ground electric fields are projected to and integrated along the path of power transmission lines. This serves as inputs to power flow models that represent the power transmission grid, yielding a time-varying set of quasi-real-time estimates of reactive power loss at the power transformers that are critical infrastructure for power distribution. We demonstrate that peak reactive power loss and hence peak risk for transformer damage from GICs does not necessarily occur during peak GMD storm times, but rather depends on the time-evolution of the polarization of the GMD's inducing fields

  19. SAM-CE, Time-Dependent 3-D Neutron Transport, Gamma Transport in Complex Geometry by Monte-Carlo

    International Nuclear Information System (INIS)

    2003-01-01

    1 - Nature of physical problem solved: The SAM-CE system comprises two Monte Carlo codes, SAM-F and SAM-A. SAM-F supersedes the forward Monte Carlo code, SAM-C. SAM-A is an adjoint Monte Carlo code designed to calculate the response due to fields of primary and secondary gamma radiation. The SAM-CE system is a FORTRAN Monte Carlo computer code designed to solve the time-dependent neutron and gamma-ray transport equations in complex three-dimensional geometries. SAM-CE is applicable for forward neutron calculations and for forward as well as adjoint primary gamma-ray calculations. In addition, SAM-CE is applicable for the gamma-ray stage of the coupled neutron-secondary gamma ray problem, which may be solved in either the forward or the adjoint mode. Time-dependent fluxes, and flux functionals such as dose, heating, count rates, etc., are calculated as functions of energy, time and position. Multiple scoring regions are permitted and these may be either finite volume regions or point detectors or both. Other scores of interest, e.g., collision and absorption densities, etc., are also made. 2 - Method of solution: A special feature of SAM-CE is its use of the 'combinatorial geometry' technique which affords the user geometric capabilities exceeding those available with other commonly used geometric packages. All nuclear interaction cross section data (derived from the ENDF for neutrons and from the UNC-format library for gamma-rays) are tabulated in point energy meshes. The energy meshes for neutrons are internally derived, based on built-in convergence criteria and user- supplied tolerances. Tabulated neutron data for each distinct nuclide are in unique and appropriate energy meshes. Both resolved and unresolved resonance parameters from ENDF data files are treated automatically, and extremely precise and detailed descriptions of cross section behaviour is permitted. Such treatment avoids the ambiguities usually associated with multi-group codes, which use flux

  20. A 3D simulation look-up library for real-time airborne gamma-ray spectroscopy

    Science.gov (United States)

    Kulisek, Jonathan A.; Wittman, Richard S.; Miller, Erin A.; Kernan, Warnick J.; McCall, Jonathon D.; McConn, Ron J.; Schweppe, John E.; Seifert, Carolyn E.; Stave, Sean C.; Stewart, Trevor N.

    2018-01-01

    A three-dimensional look-up library consisting of simulated gamma-ray spectra was developed to leverage, in real-time, the abundance of data provided by a helicopter-mounted gamma-ray detection system consisting of 92 CsI-based radiation sensors and exhibiting a highly angular-dependent response. We have demonstrated how this library can be used to help effectively estimate the terrestrial gamma-ray background, develop simulated flight scenarios, and to localize radiological sources. Source localization accuracy was significantly improved, particularly for weak sources, by estimating the entire gamma-ray spectra while accounting for scattering in the air, and especially off the ground.

  1. Precise 3D track reconstruction algorithm for the ICARUS T600 liquid argon time projection chamber detector

    CERN Document Server

    Antonello, M

    2013-01-01

    Liquid Argon Time Projection Chamber (LAr TPC) detectors offer charged particle imaging capability with remarkable spatial resolution. Precise event reconstruction procedures are critical in order to fully exploit the potential of this technology. In this paper we present a new, general approach of three-dimensional reconstruction for the LAr TPC with a practical application to track reconstruction. The efficiency of the method is evaluated on a sample of simulated tracks. We present also the application of the method to the analysis of real data tracks collected during the ICARUS T600 detector operation with the CNGS neutrino beam.

  2. A 3D time domain numerical model based on half-space Green's function for soil-structure interaction analysis

    Science.gov (United States)

    Galvín, P.; Romero, A.

    2014-05-01

    This paper presents a numerical method based on a three dimensional boundary element-finite element (BEM-FEM) coupled formulation in the time domain. The proposed model allows studying soil-structure interaction problems. The soil is modelled with the BEM, where the radiation condition is implicitly satisfied in the fundamental solution. Half-space Green's function including internal soil damping is considered as the fundamental solution. An effective treatment based on the integration into a complex Jordan path is proposed to avoid the singularities at the arrival time of the Rayleigh waves. The efficiency of the BEM is improved taking into account the spatial symmetry and the invariance of the fundamental solution when it is expressed in a dimensionless form. The FEM is used to represent the structure. The proposed method is validated by comparison with analytical solutions and numerical results presented in the literature. Finally, a soil-structure interaction problem concerning with a building subjected to different incident wave fields is studied.

  3. 3-D time-dependent numerical model of flow patterns within a large-scale Czochralski system

    Science.gov (United States)

    Nam, Phil-Ouk; O, Sang-Kun; Yi, Kyung-Woo

    2008-04-01

    Silicon single crystals grown through the Czochralski (Cz) method have increased in size to 300 mm, resulting in the use of larger crucibles. The objective of this study is to investigate the continuous Cz method in a large crucible (800 mm), which is performed by inserting a polycrystalline silicon rod into the melt. The numerical model is based on a time-dependent and three-dimensional standard k- ɛ turbulent model using the analytical software package CFD-ACE+, version 2007. Wood's metal melt, which has a low melting point ( Tm=70 °C), was used as the modeling fluid. Crystal rotation given in the clockwise direction with rotation rates varying from 0 to 15 rpm, while the crucible was rotated counter-clockwise, with rotation rates between 0 and 3 rpm. The results show that asymmetrical phenomena of fluid flow arise as results of crystal and crucible rotation, and that these phenomena move with the passage of time. Near the crystal, the flow moves towards the crucible at the pole of the asymmetrical phenomena. Away from the poles, a vortex begins to form, which is strongly pronounced in the region between the poles.

  4. REAL-TIME NAVIGATION SYSTEM IMPLEMENTATION WITHIN THE SCOPE OF 3D GEOGRAPHIC INFORMATION SYSTEMS FOR MULTI STOREY CAR PARK

    Directory of Open Access Journals (Sweden)

    B. Yenigun

    2016-10-01

    Full Text Available Today, a large increase in the number of vehicles in traffic with population growth and economic development are observed. This increase brings with it many problems. One of these problems is the parking problem as a result of the need to park the vehicle. Impractical and inadequate parking areas have a negative impact on drivers. To minimize these drawbacks, car parking is intended to develop a system to come to the aid of users. This system is planned to be developed which can be applied to indoor and multi-storey parking structure. Considered in this study, in the garage, drivers are intended to be directed as soon as possible in place of the convenient parking. However, the amount of fuel spent looking for parking tool that are caused by air and noise pollution, and to search for a parking lot when looking for a place to park the lost time, the resulting stress is minimized, it is expected that.

  5. A hybrid breath hold and continued respiration-triggered technique for time-resolved 3D MRI perfusion studies in lung cancer

    International Nuclear Information System (INIS)

    Hintze, C.; Stemmer, A.; Bock, M.

    2010-01-01

    Assessment of lung cancer perfusion is impaired by respiratory motion. Imaging times for contrast agent wash-out studies often exceed breath hold capabilities, and respiration triggering reduces temporal resolution. Temporally resolved volume acquisition of entire tumors is required to assess heterogeneity. Therefore, we developed and evaluated an MR measurement technique that exceeds a single breath hold, and provides a variable temporal resolution during acquisition while suspending breath-dependent motion. 20 patients with suspected lung cancer were subjected to perfusion studies using a spoiled 3D gradient echo sequence after bolus injection of 0.07 mmol/kg body weight of Gd-DTPA. 10 acquisitions in expiratory breath hold were followed by 50 navigator-triggered acquisitions under free breathing. Post-processing allowed for co-registration of the 3D data sets. An ROI-based visualization of the signal-time curves was performed. In all cases motion-suspended, time-resolved volume data sets (40 x 33 x 10 cm 3 , voxel size: 2.1 x 2.1 x 5.0 mm 3 ) were generated with a variable, initially high temporal resolution (2.25 sec) that was synchronized with the breath pattern and covered up to 8(1)/(2) min. In 7 / 20 cases a remaining offset could be reduced by rigid co-registration. The tumors showed fast wash-in, followed by rapid signal decay (8 / 20) or a plateau. The feasibility of a perfusion study with hybrid breath hold and navigator-triggered time-resolved 3D MRI which combines high initial temporal resolution during breath hold with a long wash-out period under free breathing was demonstrated. (orig.)

  6. Survivable architectures for time and wavelength division multiplexed passive optical networks

    Science.gov (United States)

    Wong, Elaine

    2014-08-01

    The increased network reach and customer base of next-generation time and wavelength division multiplexed PON (TWDM-PONs) have necessitated rapid fault detection and subsequent restoration of services to its users. However, direct application of existing solutions for conventional PONs to TWDM-PONs is unsuitable as these schemes rely on the loss of signal (LOS) of upstream transmissions to trigger protection switching. As TWDM-PONs are required to potentially use sleep/doze mode optical network units (ONU), the loss of upstream transmission from a sleeping or dozing ONU could erroneously trigger protection switching. Further, TWDM-PONs require its monitoring modules for fiber/device fault detection to be more sensitive than those typically deployed in conventional PONs. To address the above issues, three survivable architectures that are compliant with TWDM-PON specifications are presented in this work. These architectures combine rapid detection and protection switching against multipoint failure, and most importantly do not rely on upstream transmissions for LOS activation. Survivability analyses as well as evaluations of the additional costs incurred to achieve survivability are performed and compared to the unprotected TWDM-PON. Network parameters that impact the maximum achievable network reach, maximum split ratio, connection availability, fault impact, and the incremental reliability costs for each proposed survivable architecture are highlighted.

  7. Detection and quantification of Campylobacter jejuni and Campylobacter coli using real-time multiplex PCR.

    Science.gov (United States)

    Toplak, N; Kovač, M; Piskernik, S; Možina, S Smole; Jeršek, B

    2012-04-01

    We describe a real-time quantitative multiplex polymerase chain reaction (qmPCR) assay to identify and discriminate between isolates of Campylobacter jejuni and Campylobacter coli. Two novel sets of primers and hydrolysis probes were designed to amplify the unique DNA sequences within the hipO, ccoN and cadF genes that are specific to Camp. jejuni and Camp. coli. Using the designed optimized qmPCR assay conditions, the amplification efficiency is in range from 108 to 116%. These qmPCR assays are highly specific for Camp. jejuni and Camp. coli, as seen through testing of 40 Campylobacter strains and 17 non-Campylobacter strains. In chicken juice and tap water models spiked with known quantities of Camp. jejuni, qmPCR detected 10(2) -10(3) CFU ml(-1) within 4 h. The qmPCR assays developed in this study provide reliable and simultaneous detection and quantification of Camp. jejuni and Camp. coli, with good amplification reaction parameters. Following further validation, the qmPCR assay reported here has the potential to be applied to various sample types as an alternative and rapid methodology. © 2012 The Authors. Journal of Applied Microbiology © 2012 The Society for Applied Microbiology.

  8. 3D Seismic Imaging through Reverse-Time Migration on Homogeneous and Heterogeneous Multi-Core Processors

    Directory of Open Access Journals (Sweden)

    Mauricio Araya-Polo

    2009-01-01

    Full Text Available Reverse-Time Migration (RTM is a state-of-the-art technique in seismic acoustic imaging, because of the quality and integrity of the images it provides. Oil and gas companies trust RTM with crucial decisions on multi-million-dollar drilling investments. But RTM requires vastly more computational power than its predecessor techniques, and this has somewhat hindered its practical success. On the other hand, despite multi-core architectures promise to deliver unprecedented computational power, little attention has been devoted to mapping efficiently RTM to multi-cores. In this paper, we present a mapping of the RTM computational kernel to the IBM Cell/B.E. processor that reaches close-to-optimal performance. The kernel proves to be memory-bound and it achieves a 98% utilization of the peak memory bandwidth. Our Cell/B.E. implementation outperforms a traditional processor (PowerPC 970MP in terms of performance (with an 15.0× speedup and energy-efficiency (with a 10.0× increase in the GFlops/W delivered. Also, it is the fastest RTM implementation available to the best of our knowledge. These results increase the practical usability of RTM. Also, the RTM-Cell/B.E. combination proves to be a strong competitor in the seismic arena.

  9. Real-time 3D stabilization of a super-resolution microscope using an electrically tunable lens.

    Science.gov (United States)

    Tafteh, Reza; Abraham, Libin; Seo, Denny; Lu, Henry Y; Gold, Michael R; Chou, Keng C

    2016-10-03

    Single-molecule localization microscopy (SMLM) has become an essential tool for examining a wide variety of biological structures and processes. However, the relatively long acquisition time makes SMLM prone to drift-induced artifacts. Here we report an optical design with an electrically tunable lens (ETL) that actively stabilizes a SMLM in three dimensions and nearly eliminates the mechanical drift (RMS ~0.7 nm lateral and ~2.7 nm axial). The bifocal design that employed fiducial markers on the coverslip was able to stabilize the sample regardless of the imaging depth. The effectiveness of the ETL was demonstrated by imaging endosomal transferrin receptors near the apical surface of B-lymphocytes at a depth of 8 µm. The drift-free images obtained with the stabilization system showed that the transferrin receptors were present in distinct but heterogeneous clusters with a bimodal size distribution. In contrast, the images obtained without the stabilization system showed a broader unimodal size distribution. Thus, this stabilization system enables a more accurate analysis of cluster topology. Additionally, this ETL-based stabilization system is cost-effective and can be integrated into existing microscopy systems.

  10. Real-time 3D reconstruction of road curvature in far look-ahead distance from analysis of image sequences

    Science.gov (United States)

    Behringer, Reinhold

    1995-12-01

    A system for visual road recognition in far look-ahead distance, implemented in the autonomous road vehicle VaMP (a passenger car), is described. Visual cues of a road in a video image are the bright lane markings and the edges formed at the road borders. In a distance of more than 100 m, the most relevant road cue is the homogeneous road area, limited by the two border edges. These cues can be detected by the image processing module KRONOS applying edge detection techniques and areal 2D segmentation based on resolution triangles (analogous to a resolution pyramid). An estimation process performs an update of a state vector, which describes spatial road shape and vehicle orientation relative to the road. This state vector is estimated every 40 ms by exploiting knowledge about the vehicle movement (spatio-temporal model of vehicle dynamics) and the road design rules (clothoidal segments). Kalman filter techniques are applied to obtain an optimal estimate of the state vector by evaluating the measurements of the road border positions in the image sequence taken by a set of CCD cameras. The road consists of segments with piecewise constant curvature parameters. The borders between these segments can be detected by applying methods which have been developed for detection of discontinuities during time-discrete measurements. The road recognition system has been tested in autonomous rides with VaMP on public Autobahnen in real traffic at speeds up to 130 km/h.

  11. 3D virtuel udstilling

    DEFF Research Database (Denmark)

    Tournay, Bruno; Rüdiger, Bjarne

    2006-01-01

    3d digital model af Arkitektskolens gård med virtuel udstilling af afgangsprojekter fra afgangen sommer 2006. 10 s.......3d digital model af Arkitektskolens gård med virtuel udstilling af afgangsprojekter fra afgangen sommer 2006. 10 s....

  12. 3D Ground Mapping

    OpenAIRE

    Poverud, Therese Tokle; Christensen, Ole Petter; Jacop, Asadullah; Mpoyi, Giresse Kadima; Mann, Harjit Laly Singh; Albert, Ngenzi; Dalset, Bjørnar

    2015-01-01

    Utført i samarbeid med Cube AS Cube AS wants a system for 3D mapping of terrain using an UAV (unmanned aerial vehicle). We chose to equip the UAV with a camera to take aerial photos that are processed through image processing software to produce detailed, digital 3D maps.

  13. The next chapter in experimental petrology: Metamorphic dehydration of polycrystalline gypsum captured in 3D microtomographic time series datasets

    Science.gov (United States)

    Bedford, John; Fusseis, Florian; Leclere, Henry; Wheeler, John; Faulkner, Dan

    2016-04-01

    Nucleation and growth of new minerals in response to disequilibrium is the most fundamental metamorphic process. However, our current kinetic models of metamorphic reactions are largely based on inference from fossil mineral assemblages, rather than from direct observation. The experimental investigation of metamorphism has also been limited, typically to concealed vessels that restrict the possibility of direct microstructural monitoring. Here we present one of the first time series datasets that captures a metamorphic reaction, dehydration of polycrystalline gypsum to form hemihydrate, in a series of three dimensional x-ray microtomographic datasets. We achieved this by installing an x-ray transparent hydrothermal cell (Fusseis et al., 2014, J. Synchrotron Rad. 21, 251-253) in the microtomography beamline 2BM at the Advanced Photon Source (USA). In the cell, we heated a millimetre-sized sample of Volterra Alabaster to 388 K while applying an effective pressure of 5 MPa. Using hard x-rays that penetrate the pressure vessel, we imaged the specimen 40 times while it reacted for approximately 10 hours. Each microtomographic dataset was acquired in 300 seconds without interrupting the reaction. Our absorption microtomographic data have a voxel size of 1.3 μm, which suffices to analyse the reaction progress in 4D. Gypsum can clearly be distinguished from hemihydrate and pores, which form due to the large negative solid volume change. On the resolved scale, the first hemihydrate needles appear after about 2 hours. Our data allow tracking of individual needles throughout the entire experiment. We quantified their growth rates by measuring their circumference. While individual grains grow at different rates, they all start slowly during the initial nucleation stage, then accelerate and grow steadily between about 200 and 400 minutes before reaction rate decelerates again. Hemihydrate needles are surrounded by porous haloes, which grow with the needles, link up and

  14. Underwater 3D filming

    Directory of Open Access Journals (Sweden)

    Roberto Rinaldi

    2014-12-01

    Full Text Available After an experimental phase of many years, 3D filming is now effective and successful. Improvements are still possible, but the film industry achieved memorable success on 3D movie’s box offices due to the overall quality of its products. Special environments such as space (“Gravity” and the underwater realm look perfect to be reproduced in 3D. “Filming in space” was possible in “Gravity” using special effects and computer graphic. The underwater realm is still difficult to be handled. Underwater filming in 3D was not that easy and effective as filming in 2D, since not long ago. After almost 3 years of research, a French, Austrian and Italian team realized a perfect tool to film underwater, in 3D, without any constrains. This allows filmmakers to bring the audience deep inside an environment where they most probably will never have the chance to be.

  15. An Asynchronous Time-Division-Multiplexed Network-on-Chip for Real-Time Systems

    DEFF Research Database (Denmark)

    Kasapaki, Evangelia

    applied at its endpoints, the NIs. Overall this thesis presents the design and implementation of Argo, and the analysis of its elastic behavior. It shows that Argo provides hard real-time guarantees in a straightforward way, it has an efficient implementation and it is time-elastic....... the elasticity and its limits. A quantitative analysis models the Argo behavior using timed-graph models and worstcase timing separation of events analysis to evaluate the elasticity of Argo. The results show that the skew absorbed by the network of routers can be two or more cycles, depending on the frequency......Multi-processor architectures using networks-on-chip (NOCs) for communication are becoming the standard approach in the development of embedded systems and general purpose platforms. Typically, multi-processor platforms follow a globally asynchronous locally synchronous (GALS) timing organization...

  16. Comparison of culture, single and multiplex real-time PCR for detection of Sabin poliovirus shedding in recently vaccinated Indian children.

    Science.gov (United States)

    Giri, Sidhartha; Rajan, Anand K; Kumar, Nirmal; Dhanapal, Pavithra; Venkatesan, Jayalakshmi; Iturriza-Gomara, Miren; Taniuchi, Mami; John, Jacob; Abraham, Asha Mary; Kang, Gagandeep

    2017-08-01

    Although, culture is considered the gold standard for poliovirus detection from stool samples, real-time PCR has emerged as a faster and more sensitive alternative. Detection of poliovirus from the stool of recently vaccinated children by culture, single and multiplex real-time PCR was compared. Of the 80 samples tested, 55 (68.75%) were positive by culture compared to 61 (76.25%) and 60 (75%) samples by the single and one step multiplex real-time PCR assays respectively. Real-time PCR (singleplex and multiplex) is more sensitive than culture for poliovirus detection in stool, although the difference was not statistically significant. © 2017 Wiley Periodicals, Inc.

  17. Terrain Dynamics Analysis Using Space-Time Domain Hypersurfaces and Gradient Trajectories Derived From Time Series of 3D Point Clouds

    Science.gov (United States)

    2015-08-01

    episodic erosion event that occurred in the post-mill dam section and continuing smaller changes in the older sediments is evident in the isosurfaces...gradual losses in the two bottom layers over the more recent surveys. This indicates different controlling processes, such as seepage and fluvial erosion ...dynamic comet-like visualization. The raster maps representing migration rates at multiple elevations can also be stacked into a 3D raster (voxel

  18. Use of multiplex real-time PCR for detection of common diarrhea causing protozoan parasites in Egypt.

    Science.gov (United States)

    Nazeer, John T; El Sayed Khalifa, Khalifa; von Thien, Heidrun; El-Sibaei, Mahmoud Mohamed; Abdel-Hamid, Magda Youssef; Tawfik, Ranya Ayman Samir; Tannich, Egbert

    2013-02-01

    Diarrhea is an important cause of morbidity and mortality, worldwide. Giardia intestinalis, Cryptosporidium spp., and Entamoeba histolytica are the most common diarrhea-causing parasitic protozoa. Diagnosis of these parasites is usually performed by microscopy. However, microscopy lacks sensitivity and specificity. Replacing microscopy with more sensitive and specific nucleic acid based methods is hampered by the higher costs, in particular in developing countries. Multiplexing the detection of more than one parasite in a single test by real-time polymerase chain reaction (PCR) has been found to be very effective and would decrease the cost of the test. In the present study, stool samples collected from 396 Egyptian patients complaining of diarrhea along with 202 faecal samples from healthy controls were examined microscopically by direct smear method and after concentration using formol-ethyl acetate. Frozen portions of the same samples were tested by multiplex real-time for simultaneous detection of E. histolytica, G. intestinalis, and Cryptosporidium spp. The results indicate that among diarrheal patients in Egypt G. intestinalis is the most common protozoan parasite, with prevalence rates of 30.5 and 37.1 %, depending on the method used (microscopy vs. multiplex real-time PCR). Cryptosporidium spp. was detected in 1 % of the diarrheal patients by microscopy and in 3 % by real-time PCR. While E. histolytica/dispar was detected in 10.8 % by microscopy, less than one fifth of them (2 %) were found true positive for Entamoeba dispar by real-time PCR. E. histolytica DNA was not detected in any of the diarrheal patients. In comparison with multiplex real-time PCR, microscopy exhibited many false positive and negative cases with the three parasites giving sensitivities and specificities of 100 and 91 % for E. histolytica/dispar, 57.8 and 85.5 % for G. intestinalis, and 33.3 and 100 % for Cryptosporidium spp.

  19. Detection of anatomical changes in lung cancer patients with 2D time-integrated, 2D time-resolved and 3D time-integrated portal dosimetry: a simulation study

    Science.gov (United States)

    Wolfs, Cecile J. A.; Brás, Mariana G.; Schyns, Lotte E. J. R.; Nijsten, Sebastiaan M. J. J. G.; van Elmpt, Wouter; Scheib, Stefan G.; Baltes, Christof; Podesta, Mark; Verhaegen, Frank

    2017-08-01

    The aim of this work is to assess the performance of 2D time-integrated (2D-TI), 2D time-resolved (2D-TR) and 3D time-integrated (3D-TI) portal dosimetry in detecting dose discrepancies between the planned and (simulated) delivered dose caused by simulated changes in the anatomy of lung cancer patients. For six lung cancer patients, tumor shift, tumor regression and pleural effusion are simulated by modifying their CT images. Based on the modified CT images, time-integrated (TI) and time-resolved (TR) portal dose images (PDIs) are simulated and 3D-TI doses are calculated. The modified and original PDIs and 3D doses are compared by a gamma analysis with various gamma criteria. Furthermore, the difference in the D 95% (ΔD 95%) of the GTV is calculated and used as a gold standard. The correlation between the gamma fail rate and the ΔD 95% is investigated, as well the sensitivity and specificity of all combinations of portal dosimetry method, gamma criteria and gamma fail rate threshold. On the individual patient level, there is a correlation between the gamma fail rate and the ΔD 95%, which cannot be found at the group level. The sensitivity and specificity analysis showed that there is not one combination of portal dosimetry method, gamma criteria and gamma fail rate threshold that can detect all simulated anatomical changes. This work shows that it will be more beneficial to relate portal dosimetry and DVH analysis on the patient level, rather than trying to quantify a relationship for a group of patients. With regards to optimizing sensitivity and specificity, different combinations of portal dosimetry method, gamma criteria and gamma fail rate should be used to optimally detect certain types of anatomical changes.

  20. Contrast enhancement technique in brain 3D-CTA studies. Optimizing the amount of contrast medium according to scan time based on TDC

    International Nuclear Information System (INIS)

    Terasawa, Kazuaki; Hatcho, Atsushi

    2008-01-01

    In three-dimensional CT angiography (3D-CTA), good reproducibility can be obtained by maintaining the maximum CT numbers (HU) at a specified level. However, the correlation between the scan time and the injection time showed that the maximum CT numbers increased and varied due to the additional contrast enhancement effect from recirculation of the injected contrast medium for longer injection times when the dose of iodinated contrast medium per unit time (mgI/s) was maintained at a specified level based on the time-density curve (TDC) of the phantom. The amount of contrast medium employed at our hospital has been optimized based on an iodinated contrast medium dose per unit time providing a contrast enhancement effect of 300 HU in the middle cerebral artery. Using this standard, a TDC phantom was employed to obtain an iodinated contrast medium dose per unit time, permitting equivalent maximum CT values (used as standard values) to be obtained by changing the injection time. A contrast-enhancement technique that accounts for the variation in the scan time was evaluated. Strong correlations were observed between the scan time and the injection time (R 2 =0.969) and between the injection time and the dose of iodinated contrast medium per unit body weight (R 2 =0.994). We conclude that adjusting the dose of iodinated contrast medium per unit body weight per unit time according to the scan time permits optimization of the contrast-enhancement technique. (author)

  1. A GPU-based framework for modeling real-time 3D lung tumor conformal dosimetry with subject-specific lung tumor motion

    International Nuclear Information System (INIS)

    Min Yugang; Santhanam, Anand; Ruddy, Bari H; Neelakkantan, Harini; Meeks, Sanford L; Kupelian, Patrick A

    2010-01-01

    In this paper, we present a graphics processing unit (GPU)-based simulation framework to calculate the delivered dose to a 3D moving lung tumor and its surrounding normal tissues, which are undergoing subject-specific lung deformations. The GPU-based simulation framework models the motion of the 3D volumetric lung tumor and its surrounding tissues, simulates the dose delivery using the dose extracted from a treatment plan using Pinnacle Treatment Planning System, Phillips, for one of the 3DCTs of the 4DCT and predicts the amount and location of radiation doses deposited inside the lung. The 4DCT lung datasets were registered with each other using a modified optical flow algorithm. The motion of the tumor and the motion of the surrounding tissues were simulated by measuring the changes in lung volume during the radiotherapy treatment using spirometry. The real-time dose delivered to the tumor for each beam is generated by summing the dose delivered to the target volume at each increase in lung volume during the beam delivery time period. The simulation results showed the real-time capability of the framework at 20 discrete tumor motion steps per breath, which is higher than the number of 4DCT steps (approximately 12) reconstructed during multiple breathing cycles.

  2. A GPU-based framework for modeling real-time 3D lung tumor conformal dosimetry with subject-specific lung tumor motion

    Energy Technology Data Exchange (ETDEWEB)

    Min Yugang; Santhanam, Anand; Ruddy, Bari H [University of Central Florida, FL (United States); Neelakkantan, Harini; Meeks, Sanford L [M D Anderson Cancer Center Orlando, FL (United States); Kupelian, Patrick A, E-mail: anand.santhanam@orlandohealth.co [Department of Radiation Oncology, University of California, Los Angeles, CA (United States)

    2010-09-07

    In this paper, we present a graphics processing unit (GPU)-based simulation framework to calculate the delivered dose to a 3D moving lung tumor and its surrounding normal tissues, which are undergoing subject-specific lung deformations. The GPU-based simulation framework models the motion of the 3D volumetric lung tumor and its surrounding tissues, simulates the dose delivery using the dose extracted from a treatment plan using Pinnacle Treatment Planning System, Phillips, for one of the 3DCTs of the 4DCT and predicts the amount and location of radiation doses deposited inside the lung. The 4DCT lung datasets were registered with each other using a modified optical flow algorithm. The motion of the tumor and the motion of the surrounding tissues were simulated by measuring the changes in lung volume during the radiotherapy treatment using spirometry. The real-time dose delivered to the tumor for each beam is generated by summing the dose delivered to the target volume at each increase in lung volume during the beam delivery time period. The simulation results showed the real-time capability of the framework at 20 discrete tumor motion steps per breath, which is higher than the number of 4DCT steps (approximately 12) reconstructed during multiple breathing cycles.

  3. High-performance GPU-based rendering for real-time, rigid 2D/3D-image registration and motion prediction in radiation oncology

    Science.gov (United States)

    Spoerk, Jakob; Gendrin, Christelle; Weber, Christoph; Figl, Michael; Pawiro, Supriyanto Ardjo; Furtado, Hugo; Fabri, Daniella; Bloch, Christoph; Bergmann, Helmar; Gröller, Eduard; Birkfellner, Wolfgang

    2012-01-01

    A common problem in image-guided radiation therapy (IGRT) of lung cancer as well as other malignant diseases is the compensation of periodic and aperiodic motion during dose delivery. Modern systems for image-guided radiation oncology allow for the acquisition of cone-beam computed tomography data in the treatment room as well as the acquisition of planar radiographs during the treatment. A mid-term research goal is the compensation of tumor target volume motion by 2D/3D registration. In 2D/3D registration, spatial information on organ location is derived by an iterative comparison of perspective volume renderings, so-called digitally rendered radiographs (DRR) from computed tomography volume data, and planar reference x-rays. Currently, this rendering process is very time consuming, and real-time registration, which should at least provide data on organ position in less than a second, has not come into existence. We present two GPU-based rendering algorithms which generate a DRR of 512 × 512 pixels size from a CT dataset of 53 MB size at a pace of almost 100 Hz. This rendering rate is feasible by applying a number of algorithmic simplifications which range from alternative volume-driven rendering approaches – namely so-called wobbled splatting – to sub-sampling of the DRR-image by means of specialized raycasting techniques. Furthermore, general purpose graphics processing unit (GPGPU) programming paradigms were consequently utilized. Rendering quality and performance as well as the influence on the quality and performance of the overall registration process were measured and analyzed in detail. The results show that both methods are competitive and pave the way for fast motion compensation by rigid and possibly even non-rigid 2D/3D registration and, beyond that, adaptive filtering of motion models in IGRT. PMID:21782399

  4. Efficient compression of rearranged time-multiplexed elemental image arrays in MALT-based three-dimensional integral imaging

    Science.gov (United States)

    Kang, Ho-Hyun; Lee, Byung-Gook; Kim, Eun-Soo

    2011-06-01

    In this paper, an approach to efficiently compress the time-multiplexed EIAs picked up from the MALT-based integral imaging system is proposed. In this method, the time-multiplexed EIAs are rearranged by collecting the elemental images occupied at the same position in each EIA to enhance the similarity among the elemental images. Then, MPEG-4 is applied to these rearranged elemental images for compression. From the experimental results, it is shown that the average correlation quality ( ACQ) value representing a degree of similarity between the elemental images, and the resultant compression efficiency have been enhanced by 11.50% and 9.97%, respectively on the average for three kinds of test scenarios in the proposed method, compared to those of the conventional method. Good experimental results finally confirmed the feasibility of the proposed scheme.

  5. Use of Multiplex Real-Time PCR To Diagnose Scrub Typhus.

    Science.gov (United States)

    Tantibhedhyangkul, Wiwit; Wongsawat, Ekkarat; Silpasakorn, Saowaluk; Waywa, Duangdao; Saenyasiri, Nuttawut; Suesuay, Jintapa; Thipmontree, Wilawan; Suputtamongkol, Yupin

    2017-05-01

    Scrub typhus, caused by Orientia tsutsugamushi , is a common cause of acute undifferentiated febrile illness in the Asia-Pacific region. However, its nonspecific clinical manifestation often prevents early diagnosis. We propose the use of PCR and serologic tests as diagnostic tools. Here, we developed a multiplex real-time PCR assay using hydrolysis (TaqMan) probes targeting O. tsutsugamushi 47-kDa, groEL , and human interferon beta (IFN-β gene) genes to improve early diagnosis of scrub typhus. The amplification efficiency was higher than 94%, and the lower detection limit was 10 copies per reaction. We used a human gene as an internal DNA quality and quantity control. To determine the sensitivity of this PCR assay, we selected patients with confirmed scrub typhus who exhibited a clear 4-fold increase in the level of IgG and/or IgM. The PCR assay result was positive in 45 of 52 patients, indicating a sensitivity of 86.5% (95% confidence interval [CI]: 74.2 to 94.4). The PCR assessment was negative for all 136 non-scrub typhus patients, indicating a specificity of 100% (95% CI: 97.3 to 100). In addition, this test helped diagnose patients with inconclusive immunofluorescence assay (IFA) results and using single blood samples. In conclusion, the real-time PCR assay proposed here is sensitive and specific in diagnosing scrub typhus. Combining PCR and serologic tests will improve the diagnosis of scrub typhus among patients presenting with acute febrile illness. Copyright © 2017 American Society for Microbiology.

  6. Rapid detection of carbapenemase genes by multiplex real-time PCR.

    Science.gov (United States)

    Monteiro, Jussimara; Widen, Raymond H; Pignatari, Antonio C C; Kubasek, Carly; Silbert, Suzane

    2012-04-01

    To develop a single multiplex real-time PCR assay to detect six different genetic types of carbapenemases already identified in Enterobacteriaceae (KPC, GES, NDM, IMP, VIM and OXA-48). A total of 58 bacterial isolates were tested. Thirty were previously characterized as resistant to carbapenems and documented by PCR and sequencing analysis to carry the following genes: bla(KPC) type, bla(GES) type, bla(IMP) type, bla(VIM) type, bla(OXA-48) and bla(NDM-1). These positive strains included 21 Enterobacteriaceae, 1 Acinetobacter baumannii and 8 Pseudomonas aeruginosa isolates. The remaining 28 isolates previously tested susceptible to carbapenems and were negative for these genes. Bacterial DNA was extracted using the easyMag extractor (bioMérieux, France). The real-time PCR was performed using the Rotor-Gene 6000 instrument (Corbett Life Science, Australia) and specific primers for each carbapenemase target were designed using the DNAStar software (Madison, WI, USA). Each one of the six carbapenemase genes tested presented a different melting curve after PCR amplification. The melting temperature (T(m)) analysis of the amplicons identified was as follows: bla(IMP) type (T(m) 80.1°C), bla(OXA-48) (T(m) 81.6°C), bla(NDM-1) (T(m) 84°C), bla(GES) type (T(m) 88.6°C), bla(VIM) type (T(m) 90.3°C) and bla(KPC) type (T(m) 91.6°C). No amplification was detected among the negative samples. The results showed 100% concordance with the genotypes previously identified. The new assay was able to detect the presence of six different carbapenemase gene types in a single 3 h PCR.

  7. Blender 3D cookbook

    CERN Document Server

    Valenza, Enrico

    2015-01-01

    This book is aimed at the professionals that already have good 3D CGI experience with commercial packages and have now decided to try the open source Blender and want to experiment with something more complex than the average tutorials on the web. However, it's also aimed at the intermediate Blender users who simply want to go some steps further.It's taken for granted that you already know how to move inside the Blender interface, that you already have 3D modeling knowledge, and also that of basic 3D modeling and rendering concepts, for example, edge-loops, n-gons, or samples. In any case, it'

  8. TISKALNIK 3D DLP

    OpenAIRE

    Debeljak, Mitja

    2016-01-01

    Diplomska naloga opisuje različne vrste 3D tiskalnikov in izdelavo 3D tiskalnika s tehnologijo digitalnega svetlobnega procesa (Digital Light Processing ali DLP) za potrebe podjetja Doorson d.o.o. V nalogi je opisan postopek izdelave, deljen na mehanski, elektro in programski del ter podrobnejša predstavitev komponent, med katere kot pomembnejše sodijo Raspberry Pi in koračni motor. Prikazana je primerjava obstoječega 3D tiskalnika s tehnologijo ciljnega nalaganja (Fused Deposition Modeling a...

  9. High throughput multiplex real time PCR assay for the simultaneous quantification of DNA and RNA viruses infecting cassava plants

    OpenAIRE

    Otti, Gerald; Bouvaine, Sophie; Kimata, Bernadetha; Mkamillo, Geoffrey; Kumar, Lava; Tomlins, Keith; Maruthi, M.N.

    2016-01-01

    Aims: To develop a multiplex TaqMan-based real-time PCR assay (qPCR) for the simultaneous detection and quantification of both RNA and DNA viruses affecting cassava (Manihot esculenta) in eastern Africa.\\ud \\ud Methods and Results: The diagnostic assay was developed for two RNA viruses; Cassava brown streak virus (CBSV) and Uganda cassava brown streak virus (UCBSV) and two predominant DNA viruses; African cassava mosaic virus (ACMV) and East African cassava mosaic virus (EACMV), which cause t...

  10. NASA's "Eyes On The Solar System:" A Real-time, 3D-Interactive Tool to Teach the Wonder of Planetary Science

    Science.gov (United States)

    Hussey, K.

    2014-12-01

    NASA's Jet Propulsion Laboratory is using video game technology to immerse students, the general public and mission personnel in our solar system and beyond. "Eyes on the Solar System," a cross-platform, real-time, 3D-interactive application that can run on-line or as a stand-alone "video game," is of particular interest to educators looking for inviting tools to capture students interest in a format they like and understand. (eyes.nasa.gov). It gives users an extraordinary view of our solar system by virtually transporting them across space and time to make first-person observations of spacecraft, planetary bodies and NASA/ESA missions in action. Key scientific results illustrated with video presentations, supporting imagery and web links are imbedded contextually into the solar system. Educators who want an interactive, game-based approach to engage students in learning Planetary Science will see how "Eyes" can be effectively used to teach its principles to grades 3 through 14.The presentation will include a detailed demonstration of the software along with a description/demonstration of how this technology is being adapted for education. There will also be a preview of coming attractions. This work is being conducted by the Visualization Technology Applications and Development Group at NASA's Jet Propulsion Laboratory, the same team responsible for "Eyes on the Earth 3D," and "Eyes on Exoplanets," which can be viewed at eyes.nasa.gov/earth and eyes.nasa.gov/exoplanets.

  11. 3T MRI of the knee with optimised isotropic 3D sequences. Accurate delineation of intra-articular pathology without prolonged acquisition times

    Energy Technology Data Exchange (ETDEWEB)

    Abdulaal, Osamah M.; Rainford, Louise; Galligan, Marie; McGee, Allison [University College Dublin, Radiography and Diagnostic Imaging, School of Medicine, Belfield, Dublin (Ireland); MacMahon, Peter; Kavanagh, Eoin [Mater Misericordiae University Hospital, Department of Radiology, Dublin (Ireland); University College Dublin, School of Medicine, Dublin (Ireland); Cashman, James [Mater Misericordiae University Hospital, Department of Orthopaedics, Dublin (Ireland); University College Dublin, School of Medicine, Dublin (Ireland)

    2017-11-15

    To investigate optimised isotropic 3D turbo spin echo (TSE) and gradient echo (GRE)-based pulse sequences for visualisation of articular cartilage lesions within the knee joint. Optimisation of experimental imaging sequences was completed using healthy volunteers (n=16) with a 3-Tesla (3T) MRI scanner. Imaging of patients with knee cartilage abnormalities (n=57) was then performed. Acquired sequences included 3D proton density-weighted (PDW) TSE (SPACE) with and without fat-suppression (FS), and T2*W GRE (TrueFISP) sequences, with acquisition times of 6:51, 6:32 and 5:35 min, respectively. One hundred sixty-one confirmed cartilage lesions were detected and categorised (Grade II n=90, Grade III n=71). The highest sensitivity and specificity for detecting cartilage lesions were obtained with TrueFISP with values of 84.7% and 92%, respectively. Cartilage SNR mean for PDW SPACE-FS was the highest at 72.2. TrueFISP attained the highest CNR means for joint fluid/cartilage (101.5) and joint fluid/ligament (156.5), and the lowest CNR for cartilage/meniscus (48.5). Significant differences were identified across the three sequences for all anatomical structures with respect to SNR and CNR findings (p-value <0.05). Isotropic TrueFISP at 3T, optimised for acquisition time, accurately detects cartilage defects, although it demonstrated the lowest contrast between cartilage and meniscus. (orig.)

  12. "Eyes On The Solar System": A Real-time, 3D-Interactive Tool to Teach the Wonder of Planetary Science

    Science.gov (United States)

    Hussey, K. J.

    2011-10-01

    NASA's Jet Propulsion Laboratory is using videogame technology to immerse students, the general public and mission personnel in our solar system and beyond. "Eyes on the Solar System," a cross-platform, real-time, 3D-interactive application that runs inside a Web browser, was released worldwide late last year (solarsystem.nasa.gov/eyes). It gives users an extraordinary view of our solar system by virtually transporting them across space and time to make first-person observations of spacecraft and NASA/ESA missions in action. Key scientific results illustrated with video presentations and supporting imagery are imbedded contextually into the solar system. The presentation will include a detailed demonstration of the software along with a description/discussion of how this technology can be adapted for education and public outreach, as well as a preview of coming attractions. This work is being conducted by the Visualization Technology Applications and Development Group at NASA's Jet Propulsion Laboratory, the same team responsible for "Eyes on the Earth 3D," which can be viewed at climate.nasa.gov/Eyes.html.

  13. High-resolution real-time x-ray and 3D imaging for physical contamination detection in deboned poultry meat

    Science.gov (United States)

    Chen, Xin; Jing, Hansong; Tao, Yang; Cheng, Xuemei

    2004-03-01

    This paper describes a novel approach for detection of foreign materials in deboned poultry patties based on real-time imaging technologies. Uneven thickness of poultry patties could lead to a significant classification error in a typical X-ray imaging system, and we addressed this issue successfully by fusing laser range imaging (3D imaging) into the x-ray inspection system. In order for this synergic technology to work effectively for on-line industrial applications, the vision system should be able to identify various physical contaminations automatically and have viable real-time capabilities. To meet these challenges, a rule-based approach was formulated under a unified framework for detection of diversified subjects, and a multithread scheme was developed for real-time image processing. Algorithms of data fusion, feature extraction and pattern classification of this approach are described in this paper. Detection performance and overall throughput of the system are also discussed.

  14. Time-Predictable Communication on a Time-Division Multiplexing Network-on-Chip Multicore

    DEFF Research Database (Denmark)

    Sørensen, Rasmus Bo

    of the Argo NoC network interface (NI) that supports instantaneous reconfiguration, a TDM traffic scheduler that generates virtual circuit (VC) configurations for the Argo NoC, and software functions for two types of intercore communication. The new generation of the Argo NoC adds the capability...... of instantaneously reconfiguring VCs and it addresses the identified shortcomings of the previous generation. The VCs provide the guaranteed bandwidth and latency required to implement time-predictable inter-core communication on top of the Argo NoC. This new Argo generation is, in terms of hardware, less than half...

  15. A One-Step Real-Time Multiplex PCR for Screening Y-Chromosomal Microdeletions without Downstream Amplicon Size Analysis

    Science.gov (United States)

    Kozina, Viviana; Cappallo-Obermann, Heike; Gromoll, Jörg; Spiess, Andrej-Nikolai

    2011-01-01

    Backgound Y-chromosomal microdeletions (YCMD) are one of the major genetic causes for non-obstructive azoospermia. Genetic testing for YCMD by multiplex polymerase chain reaction (PCR) is an established method for quick and robust screening of deletions in the AZF regions of the Y-chromosome. Multiplex PCRs have the advantage of including a control gene in every reaction and significantly reducing the number of reactions needed to screen the relevant genomic markers. Principal Findings The widely established “EAA/EMQN best practice guidelines for molecular diagnosis of Y-chromosomal microdeletions (2004)” were used as a basis for designing a real-time multiplex PCR system, in which the YCMD can simply be identified by their melting points. For this reason, some AZF primers were substituted by primers for regions in their genomic proximity, and the ZFX/ZFY control primer was exchanged by the AMELX/AMELY control primer. Furthermore, we substituted the classical SybrGreen I dye by the novel and high-performing DNA-binding dye EvaGreen™ and put substantial effort in titrating the primer combinations in respect to optimal melting peak separation and peak size. Significance With these changes, we were able to develop a platform-independent and robust real-time based multiplex PCR, which makes the need for amplicon identification by electrophoretic sizing expendable. By using an open-source system for real-time PCR analysis, we further demonstrate the applicability of automated melting point and YCMD detection. PMID:21887237

  16. Advanced time and wavelength division multiplexing for metropolitan area optical data communication networks

    Science.gov (United States)

    Watford, M.; DeCusatis, C.

    2005-09-01

    With the advent of new regulations governing the protection and recovery of sensitive business data, including the Sarbanes-Oxley Act, there has been a renewed interest in business continuity and disaster recovery applications for metropolitan area networks. Specifically, there has been a need for more efficient bandwidth utilization and lower cost per channel to facilitate mirroring of multi-terabit data bases. These applications have further blurred the boundary between metropolitan and wide area networks, with synchronous disaster recovery applications running up to 100 km and asynchronous solutions extending to 300 km or more. In this paper, we discuss recent enhancements in the Nortel Optical Metro 5200 Dense Wavelength Division Multiplexing (DWDM) platform, including features recently qualified for data communication applications such as Metro Mirror, Global Mirror, and Geographically Distributed Parallel Sysplex (GDPS). Using a 10 Gigabit/second (Gbit/s) backbone, this solution transports significantly more Fibre Channel protocol traffic with up to five times greater hardware density in the same physical package. This is also among the first platforms to utilize forward error correction (FEC) on the aggregate signals to improve bit error rate (BER) performance beyond industry standards. When combined with encapsulation into wide area network protocols, the use of FEC can compensate for impairments in BER across a service provider infrastructure without impacting application level performance. Design and implementation of these features will be discussed, including results from experimental test beds which validate these solutions for a number of applications. Future extensions of this environment will also be considered, including ways to provide configurable bandwidth on demand, mitigate Fibre Channel buffer credit management issues, and support for other GDPS protocols.

  17. A multiplex real-time PCR assay for routine diagnosis of bacterial vaginosis

    NARCIS (Netherlands)

    Kusters, J. G.; Reuland, E. A.; Bouter, S.; Koenig, P.; Dorigo-Zetsma, J. W.

    2015-01-01

    A semi-quantitative multiplex PCR assay for the diagnosis of bacterial vaginosis (BV) was evaluated in a prospective study in a population of Dutch women with complaints of abnormal vaginal discharge. The PCR targets Gardnerella vaginalis, Atopobium vaginae, Megasphaera phylotype 1, Lactobacillus

  18. Influence of Contrast Agent Dilution on Ballon Deflation Time and Visibility During Tracheal Balloon Dilation: A 3D Printed Phantom Study

    International Nuclear Information System (INIS)

    Kim, Min Tae; Park, Jung-Hoon; Shin, Ji Hoon; Kim, Namkug; Kim, Sunghyun Daniel; Tsauo, Jiaywei; Kim, Kun Young; Kim, Guk Bae; Song, Ho-Young

    2017-01-01

    PurposeTo determine the effect of contrast medium dilution during tracheal balloon dilation on balloon deflation time and visibility using a 3-dimensional (3D) printed airway phantom.Materials and MethodsA comparison study to investigate balloon deflation times and image quality was performed using two contrast agents with different viscosities, i.e., iohexol and ioxithalamate, and six contrast dilutions with a 3D printed airway phantom.ResultsCompared to 1:0 concentration, 3:1, 2:1, 1:1, 1:2, and 1:3, contrast/saline ratios resulted in a 46% (56.2 s), 59.8% (73.1 s), 74.9% (91.6 s), 81.7% (99.8 s), and 83.5% (102 s) reduction for iohexol, respectively, and a 51.8% (54.7 s), 63.8% (67.6 s), 74.7% (79.2 s), 80.5% (85.3 s), and 82.4% (87.4 s) reduction for ioxithalamate, respectively, in the mean balloon deflation time, although at the expense of decreased balloon opacity (3.5, 6.9, 11.1, 12.4, and 13.9%, for iohexol, respectively, and 3.2, 6, 9.6, 10.8, and 12.4%, for ioxithalamate, respectively).ConclusionsUse of a lower viscosity contrast agent and higher contrast dilution is considered to be able to reduce balloon deflation times and then simultaneously decrease visualization of balloons. The rapid balloon deflation time is likely to improve the safe performance of interventional procedures.

  19. Influence of Contrast Agent Dilution on Ballon Deflation Time and Visibility During Tracheal Balloon Dilation: A 3D Printed Phantom Study.

    Science.gov (United States)

    Kim, Min Tae; Park, Jung-Hoon; Shin, Ji Hoon; Kim, Namkug; Kim, Sunghyun Daniel; Tsauo, Jiaywei; Kim, Kun Young; Kim, Guk Bae; Song, Ho-Young

    2017-02-01

    To determine the effect of contrast medium dilution during tracheal balloon dilation on balloon deflation time and visibility using a 3-dimensional (3D) printed airway phantom. A comparison study to investigate balloon deflation times and image quality was performed using two contrast agents with different viscosities, i.e., iohexol and ioxithalamate, and six contrast dilutions with a 3D printed airway phantom. Compared to 1:0 concentration, 3:1, 2:1, 1:1, 1:2, and 1:3, contrast/saline ratios resulted in a 46% (56.2 s), 59.8% (73.1 s), 74.9% (91.6 s), 81.7% (99.8 s), and 83.5% (102 s) reduction for iohexol, respectively, and a 51.8% (54.7 s), 63.8% (67.6 s), 74.7% (79.2 s), 80.5% (85.3 s), and 82.4% (87.4 s) reduction for ioxithalamate, respectively, in the mean balloon deflation time, although at the expense of decreased balloon opacity (3.5, 6.9, 11.1, 12.4, and 13.9%, for iohexol, respectively, and 3.2, 6, 9.6, 10.8, and 12.4%, for ioxithalamate, respectively). Use of a lower viscosity contrast agent and higher contrast dilution is considered to be able to reduce balloon deflation times and then simultaneously decrease visualization of balloons. The rapid balloon deflation time is likely to improve the safe performance of interventional procedures.

  20. Influence of Contrast Agent Dilution on Ballon Deflation Time and Visibility During Tracheal Balloon Dilation: A 3D Printed Phantom Study

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Min Tae; Park, Jung-Hoon; Shin, Ji Hoon, E-mail: jhshin@amc.seoul.kr; Kim, Namkug, E-mail: namkugkim@gmail.com [University of Ulsan College of Medicine, Departments of Radiology and Research Institute of Radiology, Asan Medical Center (Korea, Republic of); Kim, Sunghyun Daniel [Seoul National University College of Medicine (Korea, Republic of); Tsauo, Jiaywei; Kim, Kun Young [University of Ulsan College of Medicine, Departments of Radiology and Research Institute of Radiology, Asan Medical Center (Korea, Republic of); Kim, Guk Bae [University of Ulsan College of Medicine, Biomedical Engineering Research Center, Asan Medical Center (Korea, Republic of); Song, Ho-Young [University of Ulsan College of Medicine, Departments of Radiology and Research Institute of Radiology, Asan Medical Center (Korea, Republic of)

    2017-02-15

    PurposeTo determine the effect of contrast medium dilution during tracheal balloon dilation on balloon deflation time and visibility using a 3-dimensional (3D) printed airway phantom.Materials and MethodsA comparison study to investigate balloon deflation times and image quality was performed using two contrast agents with different viscosities, i.e., iohexol and ioxithalamate, and six contrast dilutions with a 3D printed airway phantom.ResultsCompared to 1:0 concentration, 3:1, 2:1, 1:1, 1:2, and 1:3, contrast/saline ratios resulted in a 46% (56.2 s), 59.8% (73.1 s), 74.9% (91.6 s), 81.7% (99.8 s), and 83.5% (102 s) reduction for iohexol, respectively, and a 51.8% (54.7 s), 63.8% (67.6 s), 74.7% (79.2 s), 80.5% (85.3 s), and 82.4% (87.4 s) reduction for ioxithalamate, respectively, in the mean balloon deflation time, although at the expense of decreased balloon opacity (3.5, 6.9, 11.1, 12.4, and 13.9%, for iohexol, respectively, and 3.2, 6, 9.6, 10.8, and 12.4%, for ioxithalamate, respectively).ConclusionsUse of a lower viscosity contrast agent and higher contrast dilution is considered to be able to reduce balloon deflation times and then simultaneously decrease visualization of balloons. The rapid balloon deflation time is likely to improve the safe performance of interventional procedures.

  1. A novel immunochromatographic assay based on a time-resolved chemiluminescence strategy for the multiplexed detection of ractopamine and clenbuterol.

    Science.gov (United States)

    Wang, Wenwen; Su, Xiaoxiao; Ouyang, Hui; Wang, Lin; Fu, Zhifeng

    2016-04-21

    A novel multiplexed immunochromatographic assay (ICA) based on a time-resolved chemiluminescence (CL) strategy was developed for quantitative detection of β-agonists, by utilizing ractopamine (RAC) and clenbuterol (CLE) as the models. Different from conventional multiplexed ICA methods which usually require two or more test lines, this strategy was developed for detection of two β-agonists by using only one test line on the nitrocellulose membrane. In this study, horseradish peroxidase and alkaline phosphatase were used as the signal probes to label RAC antibody and CLE antibody, respectively. The two CL reactions with flash type and glow type kinetics characteristics were triggered simultaneously by injecting the coreactants, then the signals for RAC and CLE detections were recorded at 3 s and 300 s after coreactants injection, respectively. Owing to the utilization of CL detection, this protocol showed ideal sensitivity for quantitation. Under the optimal conditions, the detection limits for RAC and CLE were 0.17 ng mL(-1) and 0.067 ng mL(-1) (S/N = 3), respectively. The whole assay process can be accomplished within 20 min without complicated sample pretreatment. The proposed method was successfully applied for the detection of RAC and CLE in spiked swine urine. It opens up a new pathway for designing a low cost, time-efficiency and multiplexed strategy for rapid screening and field assay. Copyright © 2016 Elsevier B.V. All rights reserved.

  2. A large capacity time division multiplexed (TDM) laser beam combining technique enabled by nanosecond speed KTN deflector

    Science.gov (United States)

    Yin, Stuart (Shizhuo); Chao, Ju-Hung; Zhu, Wenbin; Chen, Chang-Jiang; Campbell, Adrian; Henry, Michael; Dubinskiy, Mark; Hoffman, Robert C.

    2017-08-01

    In this paper, we present a novel large capacity (a 1000+ channel) time division multiplexing (TDM) laser beam combining technique by harnessing a state-of-the-art nanosecond speed potassium tantalate niobate (KTN) electro-optic (EO) beam deflector as the time division multiplexer. The major advantages of TDM approach are: (1) large multiplexing capability (over 1000 channels), (2) high spatial beam quality (the combined beam has the same spatial profile as the individual beam), (3) high spectral beam quality (the combined beam has the same spectral width as the individual beam, and (4) insensitive to the phase fluctuation of individual laser because of the nature of the incoherent beam combining. The quantitative analyses show that it is possible to achieve over one hundred kW average power, single aperture, single transverse mode solid state and/or fiber laser by pursuing this innovative beam combining method, which represents a major technical advance in the field of high energy lasers. Such kind of 100+ kW average power diffraction limited beam quality lasers can play an important role in a variety of applications such as laser directed energy weapons (DEW) and large-capacity high-speed laser manufacturing, including cutting, welding, and printing.

  3. Development of a multiplex real-time PCR to quantify aflatoxin, ochratoxin A and patulin producing molds in foods.

    Science.gov (United States)

    Rodríguez, Alicia; Rodríguez, Mar; Andrade, María J; Córdoba, Juan J

    2012-04-02

    A multiplex real-time PCR (qPCR) method to quantify aflatoxin, ochratoxin A (OTA) and patulin producing molds in foods was developed. For this, the primer pairs F/R-omt, F/R-npstr and F/R-idhtrb and the TaqMan probes, OMTprobe, NPSprobe and IDHprobe targeting the omt-1, otanpsPN and idh genes involved in aflatoxin, OTA and patulin biosynthesis, respectively, were used. The functionality of the developed qPCR method was demonstrated by the high linear relationship of the standard curves constructed with the omt-1, otanpsPN and idh gene copies and threshold cycle (Ct) values for the respective producing molds tested to quantify aflatoxin, OTA and patulin producing molds. The ability of the optimized qPCR protocol to quantify producing molds was evaluated in different artificially inoculated foods (fruits, nuts, cereals and dry-ripened meat and cheese products). Efficiency values ranged from 81 to 110% in all inoculated foods. The detection limit was between 3 and 1logcfu/g for aflatoxin, OTA and patulin producing molds. The developed multiplex qPCR was shown be an appropriate tool for sensitive quantification of growth of toxigenic fungi in foods throughout the incubation time. Thus, the multiplex qPCR is a useful, rapid and efficient method to quantify simultaneously aflatoxin, OTA and patulin producing molds in food products. Copyright © 2012 Elsevier B.V. All rights reserved.

  4. Multiplex real-time PCR targeting the RNase P RNA gene for detection and identification of Candida species in blood.

    Science.gov (United States)

    Innings, Asa; Ullberg, Måns; Johansson, Anders; Rubin, Carl Johan; Noreus, Niklas; Isaksson, Magnus; Herrmann, Björn

    2007-03-01

    We have developed a single-tube multiplex real-time PCR method for the detection of the eight most common Candida species causing septicemia: Candida albicans, C. dubliniensis, C. famata, C. glabrata, C. guilliermondii, C. krusei, C. parapsilosis, and C. tropicalis. The method developed targets the RNase P RNA gene RPR1. Sequences of this gene were determined for seven of the Candida species and showed surprisingly large sequence variation. C. glabrata was found to have a gene that was five times longer gene than those of the other species, and the nucleotide sequence similarity between C. krusei and C. albicans was as low as 55%. The multiplex PCR contained three probes that enabled the specific detection of C. albicans, C. glabrata, and C. krusei and a fourth probe that allowed the general detection of the remaining species. The method was able to detect 1 to 10 genome copies when the detection limit was tested repeatedly for the four species C. albicans, C. glabrata, C. krusei, and C. guilliermondii. No significant difference in the detection limit was seen when the multiplex format was compared with single-species PCR, i.e., two primers and one probe. The method detected eight clinically relevant Candida species and did not react with other tested non-Candida species or human DNA. The assay was applied to 20 blood samples from nine patients and showed a sensitivity similar to that of culture.

  5. YouDash3D: exploring stereoscopic 3D gaming for 3D movie theaters

    Science.gov (United States)

    Schild, Jonas; Seele, Sven; Masuch, Maic

    2012-03-01

    Along with the success of the digitally revived stereoscopic cinema, events beyond 3D movies become attractive for movie theater operators, i.e. interactive 3D games. In this paper, we present a case that explores possible challenges and solutions for interactive 3D games to be played by a movie theater audience. We analyze the setting and showcase current issues related to lighting and interaction. Our second focus is to provide gameplay mechanics that make special use of stereoscopy, especially depth-based game design. Based on these results, we present YouDash3D, a game prototype that explores public stereoscopic gameplay in a reduced kiosk setup. It features live 3D HD video stream of a professional stereo camera rig rendered in a real-time game scene. We use the effect to place the stereoscopic effigies of players into the digital game. The game showcases how stereoscopic vision can provide for a novel depth-based game mechanic. Projected trigger zones and distributed clusters of the audience video allow for easy adaptation to larger audiences and 3D movie theater gaming.

  6. BioCichlid: central dogma-based 3D visualization system of time-course microarray data on a hierarchical biological network.

    Science.gov (United States)

    Ishiwata, Ryosuke R; Morioka, Masaki S; Ogishima, Soichi; Tanaka, Hiroshi

    2009-02-15

    BioCichlid is a 3D visualization system of time-course microarray data on molecular networks, aiming at interpretation of gene expression data by transcriptional relationships based on the central dogma with physical and genetic interactions. BioCichlid visualizes both physical (protein) and genetic (regulatory) network layers, and provides animation of time-course gene expression data on the genetic network layer. Transcriptional regulations are represented to bridge the physical network (transcription factors) and genetic network (regulated genes) layers, thus integrating promoter analysis into the pathway mapping. BioCichlid enhances the interpretation of microarray data and allows for revealing the underlying mechanisms causing differential gene expressions. BioCichlid is freely available and can be accessed at http://newton.tmd.ac.jp/. Source codes for both biocichlid server and client are also available.

  7. ZTE MRI in high magnetic field as a time effective 3D imaging technique for monitoring water ingress in porous rocks at sub-millimetre resolution.

    Science.gov (United States)

    Węglarz, Władysław P; Krzyżak, Artur; Machowski, Grzegorz; Stefaniuk, Michał

    2018-04-01

    Zero echo time magnetic resonance imaging (ZTE MRI) at 9.4T was used to assess the local distribution of water in dolomite rocks under different saturation conditions. The results were compared with the industry standard Single Point Imaging (SPI) at 0.6T. 3D maps of the local amount of water saturating heterogeneous rock were obtained from the imaging data, and correlated with the corresponding structural images from high resolution micro-CT (μCT). The method can be applicable in the investigation of spatial kinetics of water saturation processes in porous, heterogeneous rocks where imaging methods based on spin echo, such as RARE, have failed due to short T 2 , while SPI is often impractical due to its long acquisition time. Copyright © 2017 Elsevier Inc. All rights reserved.

  8. Real-time high resolution 3D imaging of the lyme disease spirochete adhering to and escaping from the vasculature of a living host.

    Directory of Open Access Journals (Sweden)

    Tara J Moriarty

    2008-06-01

    Full Text Available Pathogenic spirochetes are bacteria that cause a number of emerging and re-emerging diseases worldwide, including syphilis, leptospirosis, relapsing fever, and Lyme borreliosis. They navigate efficiently through dense extracellular matrix and cross the blood-brain barrier by unknown mechanisms. Due to their slender morphology, spirochetes are difficult to visualize by standard light microscopy, impeding studies of their behavior in situ. We engineered a fluorescent infectious strain of Borrelia burgdorferi, the Lyme disease pathogen, which expressed green fluorescent protein (GFP. Real-time 3D and 4D quantitative analysis of fluorescent spirochete dissemination from the microvasculature of living mice at high resolution revealed that dissemination was a multi-stage process that included transient tethering-type associations, short-term dragging interactions, and stationary adhesion. Stationary adhesions and extravasating spirochetes were most commonly observed at endothelial junctions, and translational motility of spirochetes appeared to play an integral role in transendothelial migration. To our knowledge, this is the first report of high resolution 3D and 4D visualization of dissemination of a bacterial pathogen in a living mammalian host, and provides the first direct insight into spirochete dissemination in vivo.

  9. Evaluation of accuracy about 2D vs 3D real-time position management system based on couch rotation when non-coplanar respiratory gated radiation therapy

    Energy Technology Data Exchange (ETDEWEB)

    Kwon, Kyung Tae; Kim, Jung Soo [Dongnam Health University, Suwon (Korea, Republic of); Sim, Hyun Sun [College of Health Sciences, Korea University, Seoul (Korea, Republic of); Min, Jung Whan [Shingu University College, Sungnam (Korea, Republic of); Son, Soon Yong [Wonkwang Health Science University, Iksan (Korea, Republic of); Han, Dong Kyoon [College of Health Sciences, EulJi University, Daejeon (Korea, Republic of)

    2016-12-15

    Because of non-coplanar therapy with couch rotation in respiratory gated radiation therapy, the recognition of marker movement due to the change in the distance between the infrared camera and the marker due to the rotation of the couch is called RPM (Real-time The purpose of this paper is to evaluate the accuracy of motion reflections (baseline changes) of 2D gating configuration (two dot marker block) and 3D gating configuration (six dot marker block). The motion was measured by varying the couch angle in the clockwise and counterclockwise directions by 10° in the 2D gating configuration. In the 3D gating configuration, the couch angle was changed by 10° in the clockwise direction and compared with the baseline at the reference 0°. The reference amplitude was 1.173 to 1.165, the couch angle at 20° was 1.132, and the couch angle at 1.0° was 1.083. At 350° counterclockwise, the reference amplitude was 1.168 to 1.157, the couch angle at 340° was 1.124, and the couch angle at 330° was 1.079. In this study, the phantom is used to quantitatively evaluate the value of the amplitude according to couch change.

  10. Use of a graphics processing unit (GPU) to facilitate real-time 3D graphic presentation of the patient skin-dose distribution during fluoroscopic interventional procedures.

    Science.gov (United States)

    Rana, Vijay; Rudin, Stephen; Bednarek, Daniel R

    2012-02-23

    We have developed a dose-tracking system (DTS) that calculates the radiation dose to the patient's skin in real-time by acquiring exposure parameters and imaging-system-geometry from the digital bus on a Toshiba Infinix C-arm unit. The cumulative dose values are then displayed as a color map on an OpenGL-based 3D graphic of the patient for immediate feedback to the interventionalist. Determination of those elements on the surface of the patient 3D-graphic that intersect the beam and calculation of the dose for these elements in real time demands fast computation. Reducing the size of the elements results in more computation load on the computer processor and therefore a tradeoff occurs between the resolution of the patient graphic and the real-time performance of the DTS. The speed of the DTS for calculating dose to the skin is limited by the central processing unit (CPU) and can be improved by using the parallel processing power of a graphics processing unit (GPU). Here, we compare the performance speed of GPU-based DTS software to that of the current CPU-based software as a function of the resolution of the patient graphics. Results show a tremendous improvement in speed using the GPU. While an increase in the spatial resolution of the patient graphics resulted in slowing down the computational speed of the DTS on the CPU, the speed of the GPU-based DTS was hardly affected. This GPU-based DTS can be a powerful tool for providing accurate, real-time feedback about patient skin-dose to physicians while performing interventional procedures.

  11. 3D Imager and Method for 3D imaging

    NARCIS (Netherlands)

    Kumar, P.; Staszewski, R.; Charbon, E.

    2013-01-01

    3D imager comprising at least one pixel, each pixel comprising a photodetectorfor detecting photon incidence and a time-to-digital converter system configured for referencing said photon incidence to a reference clock, and further comprising a reference clock generator provided for generating the

  12. Time-division multiplexing for myoelectric closed-loop control using electrotactile feedback.

    Science.gov (United States)

    Dosen, Strahinja; Schaeffer, Marie-Caroline; Farina, Dario

    2014-09-15

    Restoring sensory feedback in myoelectric prostheses is still an open challenge. Closing the loop might lead to a more effective utilization and better integration of these systems into the body scheme of the user. Electrotactile stimulation can be employed to transmit the feedback information to the user, but it represents a strong interference to the recording of the myoelectric signals that are used for control. Time-division multiplexing (TDM) can be applied to avoid this interference by performing the stimulation and recording in dedicated, non-overlapping time windows. A closed-loop compensatory tracking task with myocontrol and electrotactile stimulation was used to investigate how the duration of the feedback window (FW) influences the ability to perceive the feedback information and react with an appropriate control action. Nine subjects performed eight trials with continuous recording and contralateral feedback (CONT-CLT) and TDM with ispilateral stimulation and recording using the FW of 40 ms (TDM40), 100 ms (TDM100) and 300 ms (TDM300). The tracking quality was evaluated by comparing the reference and generated trajectories using cross-correlation coefficient (CCCOEF), time delay, root mean square tracking error, and the amount of overshoot. The control performance in CONT-CLT was the best in all the outcome measures. The overall worst performance was obtained using TDM with the shortest FW (TDM40). There was no significant difference between TDM100 and TDM300, and the quality of tracking in these two conditions was high (CCCOEF ~ 0.95). The results demonstrated that FW duration is indeed an important parameter in TDM, which appears to have an optimal value. Among the tested cases, the FW duration of 100 ms seems to be the best trade-off between the quality of perception and a limited command update rate. This study represents the first systematic evaluation of a TDM-based approach for closing the loop using electrotactile feedback in myoelectric

  13. Tests of the standard (30 hz) NCER FM multiplex telemetry system, augmented by two timing channels and a compensation reference signal, used to record multiplexed seismic network data on magnetic tape

    Science.gov (United States)

    Eaton, Jerry P.

    1976-01-01

    The application of subtractive compensation to USGS seismic magnetic tape recording and playback systems was examined in a recent USGS Open-file report (1). It was found, for the standard (30 Hz) NCER multiplex system, that subtractive compensation utilizing a 4688 Hz reference signal multiplexed onto each data track was more effective than that utilizing a 3125 Hz reference signal recorded separately on a different track. Moreover, it was found that the portion of the spectrum between the uppermost data channel (3060 Hz + or - 125 Hz) and the compensation reference signal (4688 Hz) could be used to record an additional timing signal, with a center frequency of 3700 Hz and a broader playback bandwidth (ca 0 to 100 Hz) than that of the standard data channels. Accordingly, for the tests described in that report, the standard 8-datachannel multiplex system was augmented by one additional timing channel with a center frequency of 3700 Hz. The 3700 Hz discriminator used in those tests was not successfully set up to utilize subtractive compensation; so its output from a tape playback was quite noisy. Subsequently, further tests have been carried out on the application of subtractive compensation to a 4-channel broad-band multiplex system and to the standard multiplex system, both recorded on field tape recorders with relatively poor tape speed control (2), (3). In the course of these experiments, it was discovered that two separate timing channe1s, not just one, can be inserted between the uppermost data channel and the compensation reference signal, Furthermore, it was possible to adjust the discriminators used to playback these timing channels so that they profited significantly from subtractive compensation even though the playback bandwidth was 0 to 100 Hz (for short rise times of square wave timing signals). The advantages of recording two timing signals on each data track include: 1) one standard time signal to be used for critical timing, e.g. IRIG E, can be

  14. Simultaneous detection of five notifiable viral diseases of cattle by single-tube multiplex real-time RT-PCR.

    Science.gov (United States)

    Wernike, Kerstin; Hoffmann, Bernd; Beer, Martin

    2015-06-01

    Multiplexed real-time PCR (qPCR) assays enable the detection of several target genes in a single reaction, which is applicable for simultaneous testing for the most important viral diseases in samples obtained from ruminants with unspecific clinical symptoms. Here, reverse transcription qPCR (RT-qPCR) systems for the detection of bovine viral diarrhoea virus (BVDV) and bluetongue virus (BTV) were combined with an internal control system based on the beta-actin gene. Additionally, a background screening for three further major pathogens of cloven-hoofed animals reportable to the World Organisation for Animal Health, namely foot-and-mouth disease virus, epizootic haemorrhagic disease virus, and Rift Valley fever virus, was integrated using the identical fluorophore for the respective RT-qPCR assays. Every pathogen-specific assay had an analytical sensitivity of at least 100 genome copies per reaction within the multiplex approach, and a series of reference samples and clinical specimens obtained from cattle, but also from small ruminants, were detected reliably. The qPCR systems integrated in the background screening were even not influenced by the simultaneous amplification of very high BVDV and BTV genome copy numbers. The newly developed multiplex qPCR allows the specific and sensitive detection of five of the most important diseases of ruminants and could be used in the context of monitoring programs or for differential diagnostics. Copyright © 2015 Elsevier B.V. All rights reserved.

  15. Radiochromic 3D Detectors

    Science.gov (United States)

    Oldham, Mark

    2015-01-01

    Radiochromic materials exhibit a colour change when exposed to ionising radiation. Radiochromic film has been used for clinical dosimetry for many years and increasingly so recently, as films of higher sensitivities have become available. The two principle advantages of radiochromic dosimetry include greater tissue equivalence (radiologically) and the lack of requirement for development of the colour change. In a radiochromic material, the colour change arises direct from ionising interactions affecting dye molecules, without requiring any latent chemical, optical or thermal development, with important implications for increased accuracy and convenience. It is only relatively recently however, that 3D radiochromic dosimetry has become possible. In this article we review recent developments and the current state-of-the-art of 3D radiochromic dosimetry, and the potential for a more comprehensive solution for the verification of complex radiation therapy treatments, and 3D dose measurement in general.

  16. Impresora 3D

    OpenAIRE

    Moreno, Iveth; Serracín, Pilar

    2017-01-01

    La idea de llevar a la realidad un objeto dibujado en un software de diseño asistido por computadora, da lugar a la creación de las impresoras 3D. Los orígenes de la impresión 3D se dieron para los años 80, y desde aquella época hasta hoy en día, este tipo de impresión ha contribuido en diversos campos del saber, que van desde la ingeniería hasta la medicina. En sus inicios las impresoras 3D además de costosas, eran de uso exclusivo para la creación de piezas de prototipado con una fuerte apl...

  17. 3D Digital Modelling

    DEFF Research Database (Denmark)

    Hundebøl, Jesper

    wave of new building information modelling tools demands further investigation, not least because of industry representatives' somewhat coarse parlance: Now the word is spreading -3D digital modelling is nothing less than a revolution, a shift of paradigm, a new alphabet... Research qeustions. Based...... on empirical probes (interviews, observations, written inscriptions) within the Danish construction industry this paper explores the organizational and managerial dynamics of 3D Digital Modelling. The paper intends to - Illustrate how the network of (non-)human actors engaged in the promotion (and arrest) of 3...... important to appreciate the analysis. Before turning to the presentation of preliminary findings and a discussion of 3D digital modelling, it begins, however, with an outline of industry specific ICT strategic issues. Paper type. Multi-site field study...

  18. A Modular and Affordable Time-Lapse Imaging and Incubation System Based on 3D-Printed Parts, a Smartphone, and Off-The-Shelf Electronics.

    Science.gov (United States)

    Hernández Vera, Rodrigo; Schwan, Emil; Fatsis-Kavalopoulos, Nikos; Kreuger, Johan

    2016-01-01

    Time-lapse imaging is a powerful tool for studying cellular dynamics and cell behavior over long periods of time to acquire detailed functional information. However, commercially available time-lapse imaging systems are expensive and this has limited a broader implementation of this technique in low-resource environments. Further, the availability of time-lapse imaging systems often present workflow bottlenecks in well-funded institutions. To address these limitations we have designed a modular and affordable time-lapse imaging and incubation system (ATLIS). The ATLIS enables the transformation of simple inverted microscopes into live cell imaging systems using custom-designed 3D-printed parts, a smartphone, and off-the-shelf electronic components. We demonstrate that the ATLIS provides stable environmental conditions to support normal cell behavior during live imaging experiments in both traditional and evaporation-sensitive microfluidic cell culture systems. Thus, the system presented here has the potential to increase the accessibility of time-lapse microscopy of living cells for the wider research community.

  19. Modelling of the concentration-time relationship based on global diffusion-charge transfer parameters in a flow-by reactor with a 3D electrode

    Energy Technology Data Exchange (ETDEWEB)

    Nava, J.L. [Universidad Autonoma Metropolitana-Iztapalapa, Departamento de Quimica, Av. San Rafael Atlixco 186, A.P. 55-534, C.P. 09340, Mexico D.F. (Mexico); Sosa, E. [Instituto Mexicano del Petroleo, Programa de Investigacion en Ingenieria Molecular, Eje Central 152, C.P. 07730, Mexico D.F. (Mexico); Carreno, G. [Universidad de Guanajuato, Facultad de Ingenieria en Geomatica e Hidraulica, Av. Juarez 77, C.P. 36000, Guanajuato, Gto. (Mexico); Ponce-de-Leon, C. [Electrochemical Engineering Group, School of Engineering Sciences, University of Southampton, Highfield, Southampton SO17 1BJ (United Kingdom)]. E-mail: capla@soton.ac.uk; Oropeza, M.T. [Centro de Graduados e Investigacion del Instituto Tecnologico de Tijuana, Blvd. Industrial, s/n, C.P. 22500, Tijuana B.C. (Mexico)

    2006-05-25

    A concentration versus time relationship model based on the isothermal diffusion-charge transfer mechanism was developed for a flow-by reactor with a three-dimensional (3D) reticulated vitreous carbon (RVC) electrode. The relationship was based on the effectiveness factor ({eta}) which lead to the simulation of the concentration decay at different electrode polarisation conditions, i.e. -0.1, -0.3 and -0.59 V versus SCE; the charge transfer process was used for the former and mix and a mass transport control was used for the latter. Charge transfer and mass transport parameters were estimated from experimental data using Electrochemical Impedance Spectroscopy (EIS) and Linear Voltammetry (LV) techniques, respectively.

  20. 3D Projection Installations

    DEFF Research Database (Denmark)

    Halskov, Kim; Johansen, Stine Liv; Bach Mikkelsen, Michelle

    2014-01-01

    contributes to the understanding of the distinctive characteristics of such a new medium, and identifies three strategies for designing 3-D projection installations: establishing space; interplay between the digital and the physical; and transformation of materiality. The principal empirical case, From......Three-dimensional projection installations are particular kinds of augmented spaces in which a digital 3-D model is projected onto a physical three-dimensional object, thereby fusing the digital content and the physical object. Based on interaction design research and media studies, this article...

  1. Optical coherence tomography for ultrahigh-resolution 3D imaging of cell development and real-time guiding for photodynamic therapy

    Science.gov (United States)

    Wang, Tianshi; Zhen, Jinggao; Wang, Bo; Xue, Ping

    2009-11-01

    Optical coherence tomography is a new emerging technique for cross-sectional imaging with high spatial resolution of micrometer scale. It enables in vivo and non-invasive imaging with no need to contact the sample and is widely used in biological and clinic application. In this paper optical coherence tomography is demonstrated for both biological and clinic applications. For biological application, a white-light interference microscope is developed for ultrahigh-resolution full-field optical coherence tomography (full-field OCT) to implement 3D imaging of biological tissue. Spatial resolution of 0.9μm×1.1μm (transverse×axial) is achieved A system sensitivity of 85 dB is obtained at an acquisition time of 5s per image. The development of a mouse embryo is studied layer by layer with our ultrahigh-resolution full-filed OCT. For clinic application, a handheld optical coherence tomography system is designed for real-time and in situ imaging of the port wine stains (PWS) patient and supplying surgery guidance for photodynamic therapy (PDT) treatment. The light source with center wavelength of 1310nm, -3 dB wavelength range of 90 nm and optical power of 9mw is utilized. Lateral resolution of 8 μm and axial resolution of 7μm at a rate of 2 frames per second and with 102dB sensitivity are achieved in biological tissue. It is shown that OCT images distinguish very well the normal and PWS tissues in clinic and are good to serve as a valuable diagnosis tool for PDT treatment.

  2. MERRA Chem 3D IAU C-Grid Edge Mass Flux, Time Average 3-Hourly (eta coord, 2/3x1/2L73) V5.2.0

    Data.gov (United States)

    National Aeronautics and Space Administration — The MAT3NECHM or tavg3_3d_chm_Ne data product is the MERRA Data Assimilation System Chemistry 3-Dimensional chemistry on layer Edges that is time averaged, 3D model...

  3. Reduced γ–γ time walk to below 50 ps using the multiplexed-start and multiplexed-stop fast-timing technique with LaBr3(Ce) detectors

    International Nuclear Information System (INIS)

    Régis, J.-M.; Saed-Samii, N.; Rudigier, M.; Ansari, S.; Dannhoff, M.; Esmaylzadeh, A.; Fransen, C.; Gerst, R.-B.; Jolie, J.; Karayonchev, V.; Müller-Gatermann, C.; Stegemann, S.

    2016-01-01

    The electronic γ–γ fast-timing technique using arrays consisting of many LaBr 3 (Ce) detectors is a powerful method to determine lifetimes of nuclear excited states with a lower limit of about 5 ps. This method requires the determination of the energy-dependent time walk of the zero time which is represented by the centroid of a prompt γ–γ time distribution. The full-energy peak versus full-energy peak prompt response difference which represents the linearly combined mean γ–γ time walk of a fast-timing array consisting of 8 LaBr 3 (Ce) detectors was measured using a standard 152 Eu γ-ray source for the energy region of 40–1408 keV. The data were acquired using a “multiplexed-start and multiplexed-stop” analogue electronics circuitry and analysed by employing the generalized centroid difference method. Concerning the cylindrical 1.5 in.×1.5 in. LaBr 3 (Ce) crystals which are coupled to the Hamamatsu R9779 photomultiplier tubes, the best fast-timing array time resolution of 202(3) ps is obtained for the two prompt γ lines of 60 Co by using the leading-edge timing principle. When using the zero-crossover timing principle the time resolution is degraded by up to 30%, dependent on the energy and the shaping delay time of the constant fraction discriminator model Ortec 935. The smallest γ–γ time walk to below 50 ps is obtained by using a shaping delay time of about 17 ns and an optimum “time-walk adjustment” needed for detector output pulses with amplitudes smaller than 400 mV.

  4. Precise and real-time measurement of 3D tumor motion in lung due to breathing and heartbeat, measured during radiotherapy

    International Nuclear Information System (INIS)

    Seppenwoolde, Yvette; Shirato, Hiroki; Kitamura, Kei; Shimizu, Shinichi; Herk, Marcel van; Lebesque, Joos V.; Miyasaka, Kazuo

    2002-01-01

    Purpose: In this work, three-dimensional (3D) motion of lung tumors during radiotherapy in real time was investigated. Understanding the behavior of tumor motion in lung tissue to model tumor movement is necessary for accurate (gated or breath-hold) radiotherapy or CT scanning. Methods: Twenty patients were included in this study. Before treatment, a 2-mm gold marker was implanted in or near the tumor. A real-time tumor tracking system using two fluoroscopy image processor units was installed in the treatment room. The 3D position of the implanted gold marker was determined by using real-time pattern recognition and a calibrated projection geometry. The linear accelerator was triggered to irradiate the tumor only when the gold marker was located within a certain volume. The system provided the coordinates of the gold marker during beam-on and beam-off time in all directions simultaneously, at a sample rate of 30 images per second. The recorded tumor motion was analyzed in terms of the amplitude and curvature of the tumor motion in three directions, the differences in breathing level during treatment, hysteresis (the difference between the inhalation and exhalation trajectory of the tumor), and the amplitude of tumor motion induced by cardiac motion. Results: The average amplitude of the tumor motion was greatest (12±2 mm [SD]) in the cranial-caudal direction for tumors situated in the lower lobes and not attached to rigid structures such as the chest wall or vertebrae. For the lateral and anterior-posterior directions, tumor motion was small both for upper- and lower-lobe tumors (2±1 mm). The time-averaged tumor position was closer to the exhale position, because the tumor spent more time in the exhalation than in the inhalation phase. The tumor motion was modeled as a sinusoidal movement with varying asymmetry. The tumor position in the exhale phase was more stable than the tumor position in the inhale phase during individual treatment fields. However, in many

  5. Rotator cuff tendon assessment using magic-angle insensitive 3D ultrashort echo time cones magnetization transfer (UTE-Cones-MT) imaging and modeling with histological correlation.

    Science.gov (United States)

    Zhu, Yanchun; Cheng, Xin; Ma, Yajun; Wong, Jonathan H; Xie, Yaoqin; Du, Jiang; Chang, Eric Y

    2017-12-08

    Rotator cuff tendons (RCTs) are challenging to image due to the "magic angle effect" and their short T 2 . To assess the degree of magic angle sensitivity of human RCTs and to utilize a 3D ultrashort echo time Cones sequence with magnetization transfer preparation (UTE-Cones-MT) and two-pool quantitative MT modeling with histological correlation. We hypothesized that MT parameters would be less sensitive to the magic angle compared with conventional T 2 measurements. Prospective imaging pathologic correlation. Twenty cadaveric rotator cuff tendons were imaged at five sample orientations ranging from 0-90° relative to the B 0 field. 3T/3D UTE-Cones-MT and Carr-Purcell-Meiboom-Gill (CPMG). Two-pool quantitative MT modeling parameters and T 2 values were calculated in regions of interest drawn by a medical physicist. Histopathological analysis was performed and mild and severe tendinopathy groups were assigned by a histopathologist and histotechnician. Coefficients of variations (CVs) were calculated for measures between the different orientations and group means were compared for each measure. CVs of T 2 and macromolecular fractions between orientations were 26.14 ± 16.82% and 6.18 ± 2.77% (mean ± SD), respectively. T 2 measurements at 0°, 27°, 70°, and 90° showed significant differences between the two histological groups (P = 0.004, 0.008, 0.003, and 0.015, respectively), but not at 55° (P = 0.611). Mean T 2 value ranges between orientations for the mild and severe tendinopathy groups were 15.27-30.32 msec and 20.81-35.85 msec, respectively, showing overlap despite statistically significant differences (P = 0.003). Macromolecular fractions at all angles showed significant differences between the two groups (P 3D UTE-Cones-MT technique is resistant to the magic angle effect and is more sensitive to RCT degeneration. 1 Technical Efficacy: Stage 2 J. Magn. Reson. Imaging 2017. © 2017 International Society for Magnetic Resonance in Medicine.

  6. CROSS DRIVE: A New Interactive and Immersive Approach for Exploring 3D Time-Dependent Mars Atmospheric Data in Distributed Teams

    Science.gov (United States)

    Gerndt, Andreas M.; Engelke, Wito; Giuranna, Marco; Vandaele, Ann C.; Neary, Lori; Aoki, Shohei; Kasaba, Yasumasa; Garcia, Arturo; Fernando, Terrence; Roberts, David; CROSS DRIVE Team

    2016-10-01

    Atmospheric phenomena of Mars can be highly dynamic and have daily and seasonal variations. Planetary-scale wavelike disturbances, for example, are frequently observed in Mars' polar winter atmosphere. Possible sources of the wave activity were suggested to be dynamical instabilities and quasi-stationary planetary waves, i.e. waves that arise predominantly via zonally asymmetric surface properties. For a comprehensive understanding of these phenomena, single layers of altitude have to be analyzed carefully and relations between different atmospheric quantities and interaction with the surface of Mars have to be considered. The CROSS DRIVE project tries to address the presentation of those data with a global view by means of virtual reality techniques. Complex orbiter data from spectrometer and observation data from Earth are combined with global circulation models and high-resolution terrain data and images available from Mars Express or MRO instruments. Scientists can interactively extract features from those dataset and can change visualization parameters in real-time in order to emphasize findings. Stereoscopic views allow for perception of the actual 3D behavior of Mars's atmosphere. A very important feature of the visualization system is the possibility to connect distributed workspaces together. This enables discussions between distributed working groups. The workspace can scale from virtual reality systems to expert desktop applications to web-based project portals. If multiple virtual environments are connected, the 3D position of each individual user is captured and used to depict the scientist as an avatar in the virtual world. The appearance of the avatar can also scale from simple annotations to complex avatars using tele-presence technology to reconstruct the users in 3D. Any change of the feature set (annotations, cutplanes, volume rendering, etc.) within the VR is immediately exchanged between all connected users. This allows that everybody is always

  7. Tangible 3D Modelling

    DEFF Research Database (Denmark)

    Hejlesen, Aske K.; Ovesen, Nis

    2012-01-01

    This paper presents an experimental approach to teaching 3D modelling techniques in an Industrial Design programme. The approach includes the use of tangible free form models as tools for improving the overall learning. The paper is based on lecturer and student experiences obtained through...

  8. From 3D view to 3D print

    Science.gov (United States)

    Dima, M.; Farisato, G.; Bergomi, M.; Viotto, V.; Magrin, D.; Greggio, D.; Farinato, J.; Marafatto, L.; Ragazzoni, R.; Piazza, D.

    2014-08-01

    thickness, in the Z direction, and in drop-per-inch, in X and Y directions. 3D printing is also an easy and quick production technique, which can become useful in the ad-hoc realization of mechanical components for optical setups to be used in a laboratory for new concept studies and validation, reducing the manufacturing time. With this technique, indeed, it is possible to realize in few hours custom-made mechanical parts, without any specific knowledge and expertise in tool machinery, as long as the resolution and size are compliant with the requirements.

  9. SUPRA: open-source software-defined ultrasound processing for real-time applications : A 2D and 3D pipeline from beamforming to B-mode.

    Science.gov (United States)

    Göbl, Rüdiger; Navab, Nassir; Hennersperger, Christoph

    2018-03-28

    Research in ultrasound imaging is limited in reproducibility by two factors: First, many existing ultrasound pipelines are protected by intellectual property, rendering exchange of code difficult. Second, most pipelines are implemented in special hardware, resulting in limited flexibility of implemented processing steps on such platforms. With SUPRA, we propose an open-source pipeline for fully software-defined ultrasound processing for real-time applications to alleviate these problems. Covering all steps from beamforming to output of B-mode images, SUPRA can help improve the reproducibility of results and make modifications to the image acquisition mode accessible to the research community. We evaluate the pipeline qualitatively, quantitatively, and regarding its run time. The pipeline shows image quality comparable to a clinical system and backed by point spread function measurements a comparable resolution. Including all processing stages of a usual ultrasound pipeline, the run-time analysis shows that it can be executed in 2D and 3D on consumer GPUs in real time. Our software ultrasound pipeline opens up the research in image acquisition. Given access to ultrasound data from early stages (raw channel data, radiofrequency data), it simplifies the development in imaging. Furthermore, it tackles the reproducibility of research results, as code can be shared easily and even be executed without dedicated ultrasound hardware.

  10. Analysis of ancient-river systems by 3D seismic time-slice technique: A case study in northeast Malay Basin, offshore Terengganu, Malaysia

    Science.gov (United States)

    Sulaiman, Noorzamzarina; Hamzah, Umar; Samsudin, Abdul Rahim

    2014-09-01

    Fluvial sandstones constitute one of the major clastic petroleum reservoir types in many sedimentary basins around the world. This study is based on the analysis of high-resolution, shallow (seabed to 500 m depth) 3D seismic data which generated three-dimensional (3D) time slices that provide exceptional imaging of the geometry, dimension and temporal and spatial distribution of fluvial channels. The study area is in the northeast of Malay Basin about 280 km to the east of Terengganu offshore. The Malay Basin comprises a thick (> 8 km), rift to post-rift Oligo-Miocene to Pliocene basin-fill. The youngest (Miocene to Pliocene), post-rift succession is dominated by a thick (1-5 km), cyclic succession of coastal plain and coastal deposits, which accumulated in a humid-tropical climatic setting. This study focuses on the Pleistocene to Recent (500 m thick) succession, which comprises a range of seismic facies analysis of the two-dimensional (2D) seismic sections, mainly reflecting changes in fluvial channel style and river architecture. The succession has been divided into four seismic units (Unit S1-S4), bounded by basin-wide strata surfaces. Two types of boundaries have been identified: 1) a boundary that is defined by a regionally-extensive erosion surface at the base of a prominent incised valley (S3 and S4); 2) a sequence boundary that is defined by more weakly-incised, straight and low-sinuosity channels which is interpreted as low-stand alluvial bypass channel systems (S1 and S2). Each unit displays a predictable vertical change of the channel pattern and scale, with wide low-sinuosity channels at the base passing gradationally upwards into narrow high-sinuosity channels at the top. The wide variation in channel style and size is interpreted to be controlled mainly by the sea-level fluctuations on the widely flat Sunda land Platform.

  11. Magnetization transfer in human achilles tendon assessed by a 3D ultrashort echo time sequence. Quantitative examinations in healthy volunteers at 3T

    Energy Technology Data Exchange (ETDEWEB)

    Syha, R.; Grosse, U.; Springer, F. [Tuebingen Univ. (Germany). Diagnostic and Interventional Radiology; Tuebingen Univ. (Germany). Section on Experimental Radiology; Martirosian, P.; Schick, F. [Tuebingen Univ. (Germany). Section on Experimental Radiology; Ketelsen, D.; Claussen, C.D. [Tuebingen Univ. (Germany). Diagnostic and Interventional Radiology

    2011-11-15

    Magnetization transfer contrast (MTC) imaging provides insight into interactions between free and bounded water. Newly developed ultrashort echo time (UTE) sequences implemented on whole-body magnetic resonance (MR) scanners allow MTC imaging in tissues with extremely fast signal decay such as tendons. The aim of this study was to develop a technique for the quantification of the MT effect in healthy Achilles tendons in-vivo at 3 Tesla. 16 normal tendons of volunteers with no history of tendinopathy were examined using a 3D-UTE sequence with a rectangular on-resonant excitation pulse and a Fermi-shaped off-resonant MT preparation pulse. The frequency of the MT pulse was varied from 1 to 5 kHz. MT effects were calculated in terms of the MT ratio (MTR) between measurements without and with MT preparation. Direct saturation effects of MT preparation on the signal intensity were evaluated using numerical simulation of Bloch equations. One patient with tendinopathy was examined to exemplarily show changes of MTR under pathologic conditions. Calculation of MTR data was feasible in all examined tendons and showed a decrease from 0.53 {+-} 0.05 to 0.25 {+-} 0.03 (1 kHz to 5 kHz) for healthy volunteers. Evaluation of variation with gender and dominance of ankle revealed no significant differences (p > 0.05). In contrast, the patient with confirmed tendinopathy showed MTR values between 0.36 (1 kHz) and 0.19 (5 kHz). MT effects in human Achilles tendons can be reliably assessed in-vivo using a 3D UTE sequence at 3 T. All healthy tendons showed similar MTR values (coefficient of variation 10.0 {+-} 1.2 %). The examined patient showed a clearly different MT effect revealing a changed microstructure in the case of tendinopathy. (orig.)

  12. Analysis of ancient-river systems by 3D seismic time-slice technique: A case study in northeast Malay Basin, offshore Terengganu, Malaysia

    International Nuclear Information System (INIS)

    Sulaiman, Noorzamzarina; Hamzah, Umar; Samsudin, Abdul Rahim

    2014-01-01

    Fluvial sandstones constitute one of the major clastic petroleum reservoir types in many sedimentary basins around the world. This study is based on the analysis of high-resolution, shallow (seabed to 500 m depth) 3D seismic data which generated three-dimensional (3D) time slices that provide exceptional imaging of the geometry, dimension and temporal and spatial distribution of fluvial channels. The study area is in the northeast of Malay Basin about 280 km to the east of Terengganu offshore. The Malay Basin comprises a thick (> 8 km), rift to post-rift Oligo-Miocene to Pliocene basin-fill. The youngest (Miocene to Pliocene), post-rift succession is dominated by a thick (1–5 km), cyclic succession of coastal plain and coastal deposits, which accumulated in a humid-tropical climatic setting. This study focuses on the Pleistocene to Recent (500 m thick) succession, which comprises a range of seismic facies analysis of the two-dimensional (2D) seismic sections, mainly reflecting changes in fluvial channel style and river architecture. The succession has been divided into four seismic units (Unit S1-S4), bounded by basin-wide strata surfaces. Two types of boundaries have been identified: 1) a boundary that is defined by a regionally-extensive erosion surface at the base of a prominent incised valley (S3 and S4); 2) a sequence boundary that is defined by more weakly-incised, straight and low-sinuosity channels which is interpreted as low-stand alluvial bypass channel systems (S1 and S2). Each unit displays a predictable vertical change of the channel pattern and scale, with wide low-sinuosity channels at the base passing gradationally upwards into narrow high-sinuosity channels at the top. The wide variation in channel style and size is interpreted to be controlled mainly by the sea-level fluctuations on the widely flat Sunda land Platform

  13. FIMic: design for ultimate 3D-integral microscopy of in-vivo biological samples.

    Science.gov (United States)

    Scrofani, G; Sola-Pikabea, J; Llavador, A; Sanchez-Ortiga, E; Barreiro, J C; Saavedra, G; Garcia-Sucerquia, J; Martínez-Corral, M

    2018-01-01

    In this work, Fourier integral microscope (FIMic), an ultimate design of 3D-integral microscopy, is presented. By placing a multiplexing microlens array at the aperture stop of the microscope objective of the host microscope, FIMic shows extended depth of field and enhanced lateral resolution in comparison with regular integral microscopy. As FIMic directly produces a set of orthographic views of the 3D-micrometer-sized sample, it is suitable for real-time imaging. Following regular integral-imaging reconstruction algorithms, a 2.75-fold enhanced depth of field and [Formula: see text]-time better spatial resolution in comparison with conventional integral microscopy is reported. Our claims are supported by theoretical analysis and experimental images of a resolution test target, cotton fibers, and in-vivo 3D-imaging of biological specimens.

  14. Usefulness of Multiplex Real-Time PCR for Simultaneous Pathogen Detection and Resistance Profiling of Staphylococcal Bacteremia

    Directory of Open Access Journals (Sweden)

    Yousun Chung

    2016-01-01

    Full Text Available Staphylococci are the leading cause of nosocomial blood stream infections. Fast and accurate identification of staphylococci and confirmation of their methicillin resistance are crucial for immediate treatment with effective antibiotics. A multiplex real-time PCR assay that targets mecA, femA specific for S. aureus, femA specific for S. epidermidis, 16S rRNA for universal bacteria, and 16S rRNA specific for staphylococci was developed and evaluated with 290 clinical blood culture samples containing Gram-positive cocci in clusters (GPCC. For the 262 blood cultures identified to the species level with the MicroScan WalkAway system (Siemens Healthcare Diagnostics, USA, the direct real-time PCR assay of positive blood cultures showed very good agreement for the categorization of staphylococci into methicillin-resistant S. aureus (MRSA, methicillin-susceptible S. aureus (MSSA, methicillin-resistant S. epidermidis (MRSE, methicillin-susceptible S. epidermidis (MSSE, methicillin-resistant non-S. epidermidis CoNS (MRCoNS, and methicillin-susceptible non-S. epidermidis CoNS (MSCoNS (κ=0.9313. The direct multiplex real-time PCR assay of positive blood cultures containing GPCC can provide essential information at the critical point of infection with a turnaround time of no more than 4 h. Further studies should evaluate the clinical outcome of using this rapid real-time PCR assay in glycopeptide antibiotic therapy in clinical settings.

  15. An embedded real-time red peach detection system based on an OV7670 camera, ARM cortex-M4 processor and 3D look-up tables.

    Science.gov (United States)

    Teixidó, Mercè; Font, Davinia; Pallejà, Tomàs; Tresanchez, Marcel; Nogués, Miquel; Palacín, Jordi

    2012-10-22

    This work proposes the development of an embedded real-time fruit detection system for future automatic fruit harvesting. The proposed embedded system is based on an ARM Cortex-M4 (STM32F407VGT6) processor and an Omnivision OV7670 color camera. The future goal of this embedded vision system will be to control a robotized arm to automatically select and pick some fruit directly from the tree. The complete embedded system has been designed to be placed directly in the gripper tool of the future robotized harvesting arm. The embedded system will be able to perform real-time fruit detection and tracking by using a three-dimensional look-up-table (LUT) defined in the RGB color space and optimized for fruit picking. Additionally, two different methodologies for creating optimized 3D LUTs based on existing linear color models and fruit histograms were implemented in this work and compared for the case of red peaches. The resulting system is able to acquire general and zoomed orchard images and to update the relative tracking information of a red peach in the tree ten times per second.

  16. An Embedded Real-Time Red Peach Detection System Based on an OV7670 Camera, ARM Cortex-M4 Processor and 3D Look-Up Tables

    Science.gov (United States)

    Teixidó, Mercè; Font, Davinia; Pallejà, Tomàs; Tresanchez, Marcel; Nogués, Miquel; Palacín, Jordi

    2012-01-01

    This work proposes the development of an embedded real-time fruit detection system for future automatic fruit harvesting. The proposed embedded system is based on an ARM Cortex-M4 (STM32F407VGT6) processor and an Omnivision OV7670 color camera. The future goal of this embedded vision system will be to control a robotized arm to automatically select and pick some fruit directly from the tree. The complete embedded system has been designed to be placed directly in the gripper tool of the future robotized harvesting arm. The embedded system will be able to perform real-time fruit detection and tracking by using a three-dimensional look-up-table (LUT) defined in the RGB color space and optimized for fruit picking. Additionally, two different methodologies for creating optimized 3D LUTs based on existing linear color models and fruit histograms were implemented in this work and compared for the case of red peaches. The resulting system is able to acquire general and zoomed orchard images and to update the relative tracking information of a red peach in the tree ten times per second. PMID:23202040

  17. An Embedded Real-Time Red Peach Detection System Based on an OV7670 Camera, ARM Cortex-M4 Processor and 3D Look-Up Tables

    Directory of Open Access Journals (Sweden)

    Marcel Tresanchez

    2012-10-01

    Full Text Available This work proposes the development of an embedded real-time fruit detection system for future automatic fruit harvesting. The proposed embedded system is based on an ARM Cortex-M4 (STM32F407VGT6 processor and an Omnivision OV7670 color camera. The future goal of this embedded vision system will be to control a robotized arm to automatically select and pick some fruit directly from the tree. The complete embedded system has been designed to be placed directly in the gripper tool of the future robotized harvesting arm. The embedded system will be able to perform real-time fruit detection and tracking by using a three-dimensional look-up-table (LUT defined in the RGB color space and optimized for fruit picking. Additionally, two different methodologies for creating optimized 3D LUTs based on existing linear color models and fruit histograms were implemented in this work and compared for the case of red peaches. The resulting system is able to acquire general and zoomed orchard images and to update the relative tracking information of a red peach in the tree ten times per second.

  18. 2D and 3D Modeling Comparison

    OpenAIRE

    Gaidyte, Rita

    2010-01-01

    Many inventors and companies still use 2D drawings and are starting to realize a 3D design because 3D modeling can save time and money. In this project I am going to compare 2D and 3D drawings and modeling. 2D modeling and 3D modeling have advantages and disadvantages. For this comparison I made 2D and 3D models using AutoCAD, Autodesk Revit Architectural and Revit MEP software. So, I am going to compare CAD (Computer-aided design) and BIM (Building Information Modeling) technologies, beca...

  19. MO-F-BRA-05: Real-Time 3D Tumor Localization for Lung IGRT Using a Single X-Ray Projection.

    Science.gov (United States)

    Chou, C; Frederick, C; Chang, S; Pizer, S

    2012-06-01

    To study the feasibility of a novel 2D/3D image registration method, called Projection Metric Learning for Shape Kernel Regression (PML-SKR), in supporting on-board x-ray imaging systems to perform real-time image-guided radiation therapy in the lung. PML-SKR works in two stages: planning and treatment. At planning stage, firstly it parameterizes the patient's respiratory deformation from the patient's treatment-planning Respiratory-Correlated CTs (RCCTs) by doing PCA analysis on the inter-phase respiratory deformations. Secondly, it simulates a set of training projection images from a set of deformed CTs where their associated deformation parameters are sampled within 3 standard deviations of the parameter's values observed in the RCCTs. Finally, it learns a Riemannian distance metric on projection intensity for each deformation parameter. The learned distance metric forms a Gaussian kernel of a kernel regression that minimizes the leave-one-out regression residual of the corresponding deformation parameter. At treatment stage, PML-SKR interpolates the patient's 3D deformation parameters from the parameter's values in the training cases using the kernel regression with the learned distance metrics. We tested PML-SKR on the NST (Nanotube Stationary Tomosynthesis) x-ray imaging system. In each test case, a DRR (dimension: 64×64) of an x-ray source in the NST was simulated from a target CT for registration. The target CTs were deformed by normally distributed random samples of the first three deformation parameters. We generated 300 synthetic test cases from 3 lung datasets and measured the registration quality by the mTRE (mean Target Registration Error) over all cases and all voxels at tumor sites. With PML-SKR's registrations, the average mTRE and its standard deviation are down from 10.89±4.44 to 0.67±0.46 mm using 125 training projection images. The computation time for each registration is 12.71±0.70 ms. The synthetic results have shown PML-SKR's promise in

  20. Multiplex real-time PCR using SYBR® GreenER™ for the detection of DNA allergens in food.

    Science.gov (United States)

    Pafundo, Simona; Gullì, Mariolina; Marmiroli, Nelson

    2010-03-01

    We describe the development of a six-target real-time multiplex PCR assay with the SYBR® GreenER™ fluorescent dye, targeted to genes encoding for allergenic proteins commonly present in many processed food products (patent application pending). The assay was successfully trialled on reconstructed food matrices and on a range of commercial foodstuffs, and is proposed as a ready-to-use analytical tool for food manufacturers to detect the presence or confirm the absence of sequences encoding for important allergenic proteins of plant origin.

  1. A framework for inverse planning of beam-on times for 3D small animal radiotherapy using interactive multi-objective optimisation

    International Nuclear Information System (INIS)

    Balvert, Marleen; Den Hertog, Dick; Van Hoof, Stefan J; Granton, Patrick V; Trani, Daniela; Hoffmann, Aswin L; Verhaegen, Frank

    2015-01-01

    Advances in precision small animal radiotherapy hardware enable the delivery of increasingly complicated dose distributions on the millimeter scale. Manual creation and evaluation of treatment plans becomes difficult or even infeasible with an increasing number of degrees of freedom for dose delivery and available image data. The goal of this work is to develop an optimisation model that determines beam-on times for a given beam configuration, and to assess the feasibility and benefits of an automated treatment planning system for small animal radiotherapy.The developed model determines a Pareto optimal solution using operator-defined weights for a multiple-objective treatment planning problem. An interactive approach allows the planner to navigate towards, and to select the Pareto optimal treatment plan that yields the most preferred trade-off of the conflicting objectives. This model was evaluated using four small animal cases based on cone-beam computed tomography images. Resulting treatment plan quality was compared to the quality of manually optimised treatment plans using dose-volume histograms and metrics.Results show that the developed framework is well capable of optimising beam-on times for 3D dose distributions and offers several advantages over manual treatment plan optimisation. For all cases but the simple flank tumour case, a similar amount of time was needed for manual and automated beam-on time optimisation. In this time frame, manual optimisation generates a single treatment plan, while the inverse planning system yields a set of Pareto optimal solutions which provides quantitative insight on the sensitivity of conflicting objectives. Treatment planning automation decreases the dependence on operator experience and allows for the use of class solutions for similar treatment scenarios. This can shorten the time required for treatment planning and therefore increase animal throughput. In addition, this can improve treatment standardisation and

  2. The mechanism study between 3D Space-time deformation and injection or extraction of gas pressure change, the Hutubi Underground gas storage

    Science.gov (United States)

    Xiaoqiang, W.; Li, J.; Daiqing, L.; Li, C.

    2017-12-01

    The surface deformation of underground gas reservoir with the change of injection pressure is an excellent opportunity to study the load response under the action of tectonic movement and controlled load. This paper mainly focuses on the elastic deformation of underground structure caused by the change of the pressure state of reservoir rock under the condition of the irregular change of pressure in the underground gas storage of Hutubi, the largest underground gas storage in Xinjiang, at the same time, it makes a fine study on the fault activities of reservoir and induced earthquakes along with the equilibrium instability caused by the reservoir. Based on the 34 deformation integrated observation points and 3 GPS continuous observation stations constructed in the underground gas storage area of Hutubi, using modern measurement techniques such as GPS observation, precise leveling survey, flow gravity observation and so on, combined with remote sensing technology such as InSAR, the 3d space-time sequence images of the surface of reservoir area under pressure change were obtained. Combined with gas well pressure, physical parameters and regional seismic geology and geophysical data, the numerical simulation and analysis of internal changes of reservoir were carried out by using elastic and viscoelastic model, the deformation mechanical relationship of reservoir was determined and the storage layer under controlled load was basically determined. This research is financially supported by National Natural Science Foundation of China (Grant No.41474016, 41474051, 41474097)

  3. 4D ICE: A 2D Array Transducer with Integrated ASIC in a 10 Fr Catheter for Real-Time 3D Intracardiac Echocardiography.

    Science.gov (United States)

    Wildes, Douglas; Lee, Warren; Haider, Bruno; Cogan, Scott; Sundaresan, Krishnakumar; Mills, David; Yetter, Christopher; Hart, Patrick; Haun, Christopher; Concepcion, Mikael; Kirkhorn, Johan; Bitoun, Marc

    2016-10-12

    We developed a 2.5 x 6.6 mm 2D array transducer with integrated transmit/receive ASIC for 4D ICE (real-