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Sample records for three-dimensional numerical modeling

  1. Numerical Three-Dimensional Model of Airport Terminal Drainage System

    Directory of Open Access Journals (Sweden)

    Strzelecki Michał

    2014-03-01

    Full Text Available During the construction of an airport terminal it was found that as a result of the hydrostatic pressure of underground water the foundation plate of the building had dangerously shifted in the direction opposite to that of the gravitational forces. The only effective measure was to introduce a drainage system on the site. The complex geology of the area indicated that two independent drainage systems, i.e., a horizontal system in the Quaternary beds and a vertical system in the Tertiary water-bearing levels, were necessary. This paper presents numerical FEM calculations of the two drainage systems being part of the airport terminal drainaged esign. The computer simulation which was carried out took into consideration the actual effect of the drainage systems and their impact on the depression cone being formed in the two aquifers.

  2. Three-Dimensional Numerical Modeling of Acoustic Trapping in Glass Capillaries

    DEFF Research Database (Denmark)

    Ley, Mikkel Wennemoes Hvitfeld; Bruus, Henrik

    2017-01-01

    Acoustic traps are used to capture and handle suspended microparticles and cells in microfluidic applications. A particular simple and much-used acoustic trap consists of a commercially available, millimeter-sized, liquid-filled straight glass capillary actuated by a piezoelectric transducer. Here......, we present a three-dimensional numerical model of the acoustic pressure field in the liquid coupled to the displacement field of the glass wall, taking into account mixed standing and traveling waves as well as absorption. The model explains the dynamical mechanism that leads to the formation...

  3. Three-Dimensional Numerical Modeling of Macrosegregation in Continuously Cast Billets

    Directory of Open Access Journals (Sweden)

    Qipeng Dong

    2017-06-01

    Full Text Available Macrosegregation, serving as a major defect in billets, can severely degrade material homogeneity. Better understanding of the physical characteristics of macrosegregation through numerical simulation could significantly contribute to the segregation control. The main purpose of this study was to predict macrosegregation in continuously cast billets with a newly developed three-dimensional macrosegregation model. The fluid flow, solidification, and solute transport in the entire billet region were solved and analyzed. Flow patterns, revealing a typical melt recirculation at the upper region of mold and thermosolutal convection at the secondary cooling zone, significantly affect the solidification and solute distribution. The solute redistribution occurring with thermosolutal convection at the solidification front contributes significantly to continued macrosegregation as solidification proceeds. The results of this study show that the equilibrium partition coefficient is mostly responsible for the magnitude of macrosegregation, while comparison between solute P and S indicated that diffusion coefficients also have some amount of influence. Typical macrosegregation patterns containing a positively segregated peak at the centerline and negatively segregated minima at either side were obtained via the proposed three-dimensional macrosegregation model, which validated by the measured surface temperatures and segregation degree.

  4. Interaction Deep Excavation Adjacent Structure Numerical Two and Three Dimensional Modeling

    International Nuclear Information System (INIS)

    Abdallah, M.; Chehade, F. H.; Chehade, W.; Fawaz, A.

    2011-01-01

    Urban development often requires the construction of deep excavations near to buildings or other structures. We have to study complex material structure interactions where we should take into consideration several particularities. In this paper, we perform a numerical modeling with the finite element method, using PLAXIS software, of the interaction deep excavation-diaphragm wall-soil-structure in the case of non linear soil behavior. We focus our study on a comparison of the results given respectively by two and three dimensional modelings. This allows us to give some recommendations concerning the validity of twodimensional study. We perform a parametric study according to the initial loading on the structure and the struts number. (author)

  5. Three-dimensional numerical modelling of a magnetically deflected dc transferred arc in argon

    CERN Document Server

    Blais, A; Boulos, M I

    2003-01-01

    The aim of this work is to develop a numerical model for the deflection of dc transferred arcs using an external magnetic field as a first step into the modelling of industrial arc furnaces. The arc is deflected by the use of a conductor aligned parallel to the arc axis through which flows an electric current. The model is validated by comparing the results of axisymmetric calculations to modelling results from the scientific literature. The present model is found to be a good representation of the electric dc arc as differences with the literature are easily explained by model parameters such as the critical boundary conditions at the electrodes. Transferred arc cases exhibit the expected behaviour as the temperature T, the velocity v-vector and the electrical potential drop DELTA phi all increase with the arc current I and the argon flow rate Q. Three-dimensional geometry is implemented, enabling one to numerically deflect the arc. For the deflected arc cases, the deflection increases with the arc current I...

  6. Three-dimensional numerical modelling of a magnetically deflected dc transferred arc in argon

    International Nuclear Information System (INIS)

    Blais, A; Proulx, P; Boulos, M I

    2003-01-01

    The aim of this work is to develop a numerical model for the deflection of dc transferred arcs using an external magnetic field as a first step into the modelling of industrial arc furnaces. The arc is deflected by the use of a conductor aligned parallel to the arc axis through which flows an electric current. The model is validated by comparing the results of axisymmetric calculations to modelling results from the scientific literature. The present model is found to be a good representation of the electric dc arc as differences with the literature are easily explained by model parameters such as the critical boundary conditions at the electrodes. Transferred arc cases exhibit the expected behaviour as the temperature T, the velocity v-vector and the electrical potential drop Δφ all increase with the arc current I and the argon flow rate Q. Three-dimensional geometry is implemented, enabling one to numerically deflect the arc. For the deflected arc cases, the deflection increases with the arc current I and conductor current I conductor and decreases with the flow rate Q and x 0 , the arc-conductor distance. These deflection behaviours are explained using physical arguments

  7. Three dimensional numerical modeling of flow and pollutant transport in a flooding area of 2008 US Midwest Flood

    Science.gov (United States)

    This paper presents the development and application of a three-dimensional numerical model for simulating the flow field and pollutant transport in a flood zone near the confluence of the Mississippi River and Iowa River in Oakville, Iowa. Due to a levee breaching along the Iowa River during the US ...

  8. Three-Dimensional Numerical Modeling of Crustal Growth at Active Continental Margins

    Science.gov (United States)

    Zhu, G.; Gerya, T.; Tackley, P. J.

    2011-12-01

    Active margins are important sites of new continental crust formation by magmatic processes related to the subduction of oceanic plates. We investigate these phenomena using a three-dimensional coupled petrological-geochemical-thermomechanical numerical model, which combines a finite-difference flow solver with a non-diffusive marker-in-cell technique for advection (I3ELVIS code, Gerya and Yuen, PEPI,2007). The model includes mantle flow associated with the subducting plate, water release from the slab, fluid propagation that triggers partial melting at the slab surface, melt extraction and the resulting volcanic crustal growth at the surface. The model also accounts for variations in physical properties (mainly density and viscosity) of both fluids and rocks as a function of local conditions in temperature, pressure, deformation, nature of the rocks, and chemical exchanges. Our results show different patterns of crustal growth and surface topography, which are comparable to nature, during subduction at active continental margins. Often, two trench-parallel lines of magmatic activity, which reflect two maxima of melt production atop the slab, are formed on the surface. The melt extraction rate controls the patterns of new crust at different ages. Moving free water reflects the path of fluids, and the velocity of free water shows the trend of two parallel lines of magmatic activity. The formation of new crust in particular time intervals is distributed in finger-like shapes, corresponding to finger-like and ridge-like cold plumes developed atop the subducting slabs (Zhu et al., G-cubed,2009; PEPI,2011). Most of the new crust is basaltic, formed from peridotitic mantle. Granitic crust extracted from melted sediment and upper crust forms in a line closer to the trench, and its distribution reflects the finger-like cold plumes. Dacitic crust extracted from the melted lower crust forms in a line farther away from the trench, and its distribution is anticorrelated with

  9. Numerical Simulation on Hydromechanical Coupling in Porous Media Adopting Three-Dimensional Pore-Scale Model

    Science.gov (United States)

    Liu, Jianjun; Song, Rui; Cui, Mengmeng

    2014-01-01

    A novel approach of simulating hydromechanical coupling in pore-scale models of porous media is presented in this paper. Parameters of the sandstone samples, such as the stress-strain curve, Poisson's ratio, and permeability under different pore pressure and confining pressure, are tested in laboratory scale. The micro-CT scanner is employed to scan the samples for three-dimensional images, as input to construct the model. Accordingly, four physical models possessing the same pore and rock matrix characteristics as the natural sandstones are developed. Based on the micro-CT images, the three-dimensional finite element models of both rock matrix and pore space are established by MIMICS and ICEM software platform. Navier-Stokes equation and elastic constitutive equation are used as the mathematical model for simulation. A hydromechanical coupling analysis in pore-scale finite element model of porous media is simulated by ANSYS and CFX software. Hereby, permeability of sandstone samples under different pore pressure and confining pressure has been predicted. The simulation results agree well with the benchmark data. Through reproducing its stress state underground, the prediction accuracy of the porous rock permeability in pore-scale simulation is promoted. Consequently, the effects of pore pressure and confining pressure on permeability are revealed from the microscopic view. PMID:24955384

  10. A numerical three-dimensional ocean general circulation and radionuclides dispersion model

    International Nuclear Information System (INIS)

    Chartier, M.; Marti, O.

    1988-01-01

    The dispersion of radioactive waste disposed of in the deep-sea or transferred from the atmosphere is a complex hydrodynamic problem concerned by space scales as large as the world ocean. The recent development in the high-speed computers has led to significant progress in ocean modelling and now allows a thorough improvement in the accuracy of the simulations of the nuclides dispersion in the sea. A three-dimensional ocean general circulation model has been recently developed in France for research and engineering purposes. The model solves the primitive equation of the ocean hydrodynamics and the advection-diffusion equation for any dissolved tracer. The code has been fully vectorized and multitasked on 1 to 4 processors of the CRAY-2

  11. Three-dimensional direct numerical simulation of electromagnetically driven multiscale shallow layer flows: Numerical modeling and physical properties

    Science.gov (United States)

    Lardeau, Sylvain; Ferrari, Simone; Rossi, Lionel

    2008-12-01

    Three-dimensional (3D) direct numerical simulations of a flow driven by multiscale electromagnetic forcing are performed in order to reproduce with maximum accuracy the quasi-two-dimensional (2D) flow generated by the same multiscale forcing in the laboratory. The method presented is based on a 3D description of the flow and the electromagnetic forcing. Very good agreements between our simulations and the experiments are found both on velocity and acceleration field, this last comparison being, to our knowledge, done for the first time. Such agreement requires that both experiments and simulations are carefully performed and, more importantly, that the underlying simplification to model the experiments and the multiscale electromagnetic forcing do not introduce significant errors. The results presented in this paper differ significantly from previous 2D direct numerical simulation in which a classical linear Rayleigh friction modeling term was used to mimic the effect of the wall-normal friction. Indeed, purely 2D simulations are found to underestimate the Reynolds number and, due to the dominance of nonhomogeneous bottom friction, lead to the wrong physical mechanism. For the range of conditions presented in this paper, the Reynolds number, defined by the ratio between acceleration and viscous terms, remains the order of unity, and the Hartmann number, defined by the ratio between electromagnetic force terms and viscous terms, is about 2. The main conclusion is that 3D simulations are required to model the (3D) electromagnetic forces and the wall-normal shear. Indeed, even if the flow is quasi-2D in terms of energy, a full 3D approach is required to simulate these shallow layer flows driven by multiscale electromagnetic forcing. In the range of forcing intensity investigated in this paper, these multiscale flows remain quasi-2D, with negligible energy in the wall-normal velocity component. It is also shown that the driving terms are the electromagnetic forcing and

  12. Physical modeling and numerical simulation of subcooled boiling in one- and three-dimensional representation of bundle geometry

    International Nuclear Information System (INIS)

    Bottoni, M.; Lyczkowski, R.; Ahuja, S.

    1995-01-01

    Numerical simulation of subcooled boiling in one-dimensional geometry with the Homogeneous Equilibrium Model (HEM) may yield difficulties related to the very low sonic velocity associated with the HEM. These difficulties do not arise with subcritical flow. Possible solutions of the problem include introducing a relaxation of the vapor production rate. Three-dimensional simulations of subcooled boiling in bundle geometry typical of fast reactors can be performed by using two systems of conservation equations, one for the HEM and the other for a Separated Phases Model (SPM), with a smooth transition between the two models

  13. Three dimensional modelling and numerical analysis of super-radiant harmonic emission in FEL (optical klystron)

    International Nuclear Information System (INIS)

    Gover, A.; Friedman, A.; Luccio, A.

    1986-09-01

    A full 3-D Analysis of super-radiant (bunched electron) free electron harmonic radiation is presented. A generalized form of the FEL pendulum equation was derived and numerically solved. Both spectral and phasor formulation were developed to treat the radiation in the time domain. In space the radiation field is expanded in terms of either a set of free space discrete modes or plane waves. The numerical solutions reveal some new distinctly 3-D effects to which we provide a physical explanation. 12 refs., 9 figs., 5 tabs

  14. Three-dimensional biomechanical properties of human vocal folds: Parameter optimization of a numerical model to match in vitro dynamics

    Science.gov (United States)

    Yang, Anxiong; Berry, David A.; Kaltenbacher, Manfred; Döllinger, Michael

    2012-01-01

    The human voice signal originates from the vibrations of the two vocal folds within the larynx. The interactions of several intrinsic laryngeal muscles adduct and shape the vocal folds to facilitate vibration in response to airflow. Three-dimensional vocal fold dynamics are extracted from in vitro hemilarynx experiments and fitted by a numerical three-dimensional-multi-mass-model (3DM) using an optimization procedure. In this work, the 3DM dynamics are optimized over 24 experimental data sets to estimate biomechanical vocal fold properties during phonation. Accuracy of the optimization is verified by low normalized error (0.13 ± 0.02), high correlation (83% ± 2%), and reproducible subglottal pressure values. The optimized, 3DM parameters yielded biomechanical variations in tissue properties along the vocal fold surface, including variations in both the local mass and stiffness of vocal folds. That is, both mass and stiffness increased along the superior-to-inferior direction. These variations were statistically analyzed under different experimental conditions (e.g., an increase in tension as a function of vocal fold elongation and an increase in stiffness and a decrease in mass as a function of glottal airflow). The study showed that physiologically relevant vocal fold tissue properties, which cannot be directly measured during in vivo human phonation, can be captured using this 3D-modeling technique. PMID:22352511

  15. Three-dimensional numerical modeling of turbulent single-phase and two-phase flow in curved pipes

    International Nuclear Information System (INIS)

    Xin, R.C.; Dong, Z.F.; Ebadian, M.A.

    1996-01-01

    In this study, three-dimensional single-phase and two-phase flows in curved pipes have been investigated numerically. Two different pipe configurations were computed. When the results of the single-phase flow simulation were compared with the experimental data, a fairly good agreement was achieved. A flow-developing process has been suggested in single-phase flow, in which the turbulence is stronger near the outer tube wall than near the inner tube wall. For two-phase flow, the Eulerian multiphase model was used to simulate the phase distribution of a three-dimensional gas-liquid bubble flow in curved pipe. The RNG/κ-ε turbulence model was used to determine the turbulence field. An inlet gas void fraction of 5 percent was simulated. The gas phase effects on the liquid phase flow velocity have been examined by comparing the results of single-phase flow and two-phase flow. The findings show that for the downward flow in the U bend, the gas concentrates at the inner portion of the cross section at φ = π/18 - π/6 in most cases. The results of the phase distribution simulation are compared to experimental observations qualitatively and topologically

  16. A three-dimensional stratigraphic model for aggrading submarine channels based on laboratory experiments, numerical modeling, and sediment cores

    Science.gov (United States)

    Limaye, A. B.; Komatsu, Y.; Suzuki, K.; Paola, C.

    2017-12-01

    Turbidity currents deliver clastic sediment from continental margins to the deep ocean, and are the main driver of landscape and stratigraphic evolution in many low-relief, submarine environments. The sedimentary architecture of turbidites—including the spatial organization of coarse and fine sediments—is closely related to the aggradation, scour, and lateral shifting of channels. Seismic stratigraphy indicates that submarine, meandering channels often aggrade rapidly relative to lateral shifting, and develop channel sand bodies with high vertical connectivity. In comparison, the stratigraphic architecture developed by submarine, braided is relatively uncertain. We present a new stratigraphic model for submarine braided channels that integrates predictions from laboratory experiments and flow modeling with constraints from sediment cores. In the laboratory experiments, a saline density current developed subaqueous channels in plastic sediment. The channels aggraded to form a deposit with a vertical scale of approximately five channel depths. We collected topography data during aggradation to (1) establish relative stratigraphic age, and (2) estimate the sorting patterns of a hypothetical grain size distribution. We applied a numerical flow model to each topographic surface and used modeled flow depth as a proxy for relative grain size. We then conditioned the resulting stratigraphic model to observed grain size distributions using sediment core data from the Nankai Trough, offshore Japan. Using this stratigraphic model, we establish new, quantitative predictions for the two- and three-dimensional connectivity of coarse sediment as a function of fine-sediment fraction. Using this case study as an example, we will highlight outstanding challenges in relating the evolution of low-relief landscapes to the stratigraphic record.

  17. Three-dimensional modelling and numerical optimisation of the W7-X ICRH antenna

    Energy Technology Data Exchange (ETDEWEB)

    Louche, F., E-mail: fabrice.louche@rma.ac.be [Laboratoire de physique des plasmas de l’ERM, Laboratorium voor plasmafysica van de KMS (LPP-ERM/KMS), Ecole Royale Militaire, Koninklijke Militaire School, Brussels (Belgium); Křivská, A.; Messiaen, A.; Ongena, J. [Laboratoire de physique des plasmas de l’ERM, Laboratorium voor plasmafysica van de KMS (LPP-ERM/KMS), Ecole Royale Militaire, Koninklijke Militaire School, Brussels (Belgium); Borsuk, V. [Institute of Energy and Climate Research – Plasma Physics, Forschungszentrum Juelich (Germany); Durodié, F.; Schweer, B. [Laboratoire de physique des plasmas de l’ERM, Laboratorium voor plasmafysica van de KMS (LPP-ERM/KMS), Ecole Royale Militaire, Koninklijke Militaire School, Brussels (Belgium)

    2015-10-15

    Highlights: • A simplified version of the ICRF antenna for the stellarator W7-X has been modelled with the 3D electromagnetic software Microwave Studio. This antenna can be tuned between 25 and 38 MHz with the help of adjustable capacitors. • In previous modellings the front of the antenna was modelled with the help of 3D codes, while the capacitors were modelled as lumped elements with a given DC capacitance. As this approach does not take into account the effect of the internal inductance, a MWS model of these capacitors has been developed. • The initial geometry does not permit the operation at 38 MHz. By modifying some geometrical parameters of the front face, it was possible to increase the frequency band of the antenna, and to increase (up to 25%) the maximum coupled power accounting for the technical constraints on the capacitors. • The W7-X ICRH antenna must be operated at 25 and 38 MHz, and for various toroidal phasings of the strap RF currents. Due to the considered duty cycle it is shown that thanks to a special procedure based on minimisation techniques, it is possible to define a satisfactory optimum geometry in agreement with the specifications of the capacitors. • The various steps of the optimisation are validated with TOPICA simulations. For a given density profile the RF power coupling expectancy can be precisely computed. - Abstract: Ion Cyclotron Resonance Heating (ICRH) is a promising heating and wall conditioning method considered for the W7-X stellarator and a dedicated ICRH antenna has been designed. This antenna must perform several tasks in a long term physics programme: fast particles generation, heating at high densities, current drive and ICRH physics studies. Various minority heating scenarios are considered and two frequency bands will be used. In the present work a design for the low frequency range (25–38 MHz) only is developed. The antenna is made of 2 straps with tap feeds and tuning capacitors with DC capacitance in

  18. Three-dimensional numerical modeling of an induction heated injection molding tool with flow visualization

    DEFF Research Database (Denmark)

    Guerrier, Patrick; Tosello, Guido; Nielsen, Kaspar Kirstein

    2016-01-01

    , comparison of the induction heating and filling of the cavity is compared and validated with simulations. Two polymer materials ABS and HVPC were utilized during the injection molding experiments carried out in this work. A nonlinear electromagnetic model was employed to establish an effective linear......Using elevated mold temperature is known to have a positive influence of final injection molded parts. Induction heating is a method that allow obtaining a rapid thermal cycle, so the overall molding cycle time is not increased. In the present research work, an integrated multi-turn induction...... heating coil has been developed and assembled into an injection molding tool provided with a glass window, so the effect of induction heating can directly be captured by a high speed camera. In addition, thermocouples and pressure sensors are also installed, and together with the high speed videos...

  19. CHANGE: A numerical model for three-dimensional modelling of channelized flow in rock: Theory and design

    International Nuclear Information System (INIS)

    Billaux, D.; Long, J.C.S.; Peterson, J.E. Jr.

    1990-03-01

    A model for channelized flow in three-dimensional, random networks of fractures has been developed. In this model, the fractures are disc-shaped discontinuities in an impermeable matrix. Within each fracture, flow occurs only in a network of random channels. The channels in each fracture can be generated independently with random distributions of length, conductivity, and orientation in the fracture plane. Boundary conditions are specified on the sides of a ''flow region,'' and at the intersections of the channels with interior ''holes'' specified by the user to simulate boreholes or drifts. This code is part of a set of programs used to generate two-dimensional or three-dimensional random fracture networks, plot them, compute flow through them and analyze the results. 8 refs., 13 figs

  20. Numerical investigation of fluid mud motion using a three-dimensional hydrodynamic and two-dimensional fluid mud coupling model

    Science.gov (United States)

    Yang, Xiaochen; Zhang, Qinghe; Hao, Linnan

    2015-03-01

    A water-fluid mud coupling model is developed based on the unstructured grid finite volume coastal ocean model (FVCOM) to investigate the fluid mud motion. The hydrodynamics and sediment transport of the overlying water column are solved using the original three-dimensional ocean model. A horizontal two-dimensional fluid mud model is integrated into the FVCOM model to simulate the underlying fluid mud flow. The fluid mud interacts with the water column through the sediment flux, current, and shear stress. The friction factor between the fluid mud and the bed, which is traditionally determined empirically, is derived with the assumption that the vertical distribution of shear stress below the yield surface of fluid mud is identical to that of uniform laminar flow of Newtonian fluid in the open channel. The model is validated by experimental data and reasonable agreement is found. Compared with numerical cases with fixed friction factors, the results simulated with the derived friction factor exhibit the best agreement with the experiment, which demonstrates the necessity of the derivation of the friction factor.

  1. Investigation of Rock Mass Stability Around the Tunnels in an Underground Mine in USA Using Three-Dimensional Numerical Modeling

    Science.gov (United States)

    Xing, Yan; Kulatilake, P. H. S. W.; Sandbak, L. A.

    2018-02-01

    The stability of the rock mass around the tunnels in an underground mine was investigated using the distinct element method. A three-dimensional model was developed based on the available geological, geotechnical, and mine construction information. It incorporates a complex lithological system, persistent and non-persistent faults, and a complex tunnel system including backfilled tunnels. The strain-softening constitutive model was applied for the rock masses. The rock mass properties were estimated using the Hoek-Brown equations based on the intact rock properties and the RMR values. The fault material behavior was modeled using the continuously yielding joint model. Sequential construction and rock supporting procedures were simulated based on the way they progressed in the mine. Stress analyses were performed to study the effect of the horizontal in situ stresses and the variability of rock mass properties on tunnel stability, and to evaluate the effectiveness of rock supports. The rock mass behavior was assessed using the stresses, failure zones, deformations around the tunnels, and the fault shear displacement vectors. The safety of rock supports was quantified using the bond shear and bolt tensile failures. Results show that the major fault and weak interlayer have distinct influences on the displacements and stresses around the tunnels. Comparison between the numerical modeling results and the field measurements indicated the cases with the average rock mass properties, and the K 0 values between 0.5 and 1.25 provide satisfactory agreement with the field measurements.

  2. Three-dimensional transport coefficient model and prediction-correction numerical method for thermal margin analysis of PWR cores

    International Nuclear Information System (INIS)

    Chiu, C.

    1981-01-01

    Combustion Engineering Inc. designs its modern PWR reactor cores using open-core thermal-hydraulic methods where the mass, momentum and energy equations are solved in three dimensions (one axial and two lateral directions). The resultant fluid properties are used to compute the minimum Departure from Nuclear Boiling Ratio (DNBR) which ultimately sets the power capability of the core. The on-line digital monitoring and protection systems require a small fast-running algorithm of the design code. This paper presents two techniques used in the development of the on-line DNB algorithm. First, a three-dimensional transport coefficient model is introduced to radially group the flow subchannel into channels for the thermal-hydraulic fluid properties calculation. Conservation equations of mass, momentum and energy for this channels are derived using transport coefficients to modify the calculation of the radial transport of enthalpy and momentum. Second, a simplified, non-iterative numerical method, called the prediction-correction method, is applied together with the transport coefficient model to reduce the computer execution time in the determination of fluid properties. Comparison of the algorithm and the design thermal-hydraulic code shows agreement to within 0.65% equivalent power at a 95/95 confidence/probability level for all normal operating conditions of the PWR core. This algorithm accuracy is achieved with 1/800th of the computer processing time of its parent design code. (orig.)

  3. Numerical analysis of three-dimensional turbulent flow in a 90deg bent tube by algebraic Reynolds stress model

    International Nuclear Information System (INIS)

    Sugiyama, Hitoshi; Akiyama, Mitsunobu; Shinohara, Yasunori; Hitomi, Daisuke

    1997-01-01

    A numerical analysis has been performed for three dimensional developing turbulent flow in a 90deg bent tube with straight inlet and outlet sections by an algebraic Reynolds stress model. To our knowledge, very little has been reported about detailed comparison between calculated results and experimental data containing Reynolds stresses. In calculation, an algebraic Reynolds stress model together with a boundary-fitted coordinate system is applied to a 90deg bent tube in order to solve anisotropic turbulent flow precisely. The calculated results display comparatively good agreement with the experimental data of time averaged velocity and secondary vectors. In addition, the present method predicts as a characteristic feature that the intensity of secondary flow near the inner wall is increased immediately downstream from the bend outlet by the pressure gradient. With regard to comparison of Reynolds stresses, the present method is able to reproduce well the distributions of streamwise normal stress and shear stress defined streamwise and radial velocity fluctuation except for the shear stress defined streamwise and circumferential velocity fluctuation. The present calculation has been found to simulate many features of the developing flow in bent tube satisfactorily, but it has a tendency to underpredict the Reynolds stresses. (author)

  4. A numerical model of mantle convection with deformable, mobile continental lithosphere within three-dimensional spherical geometry

    Science.gov (United States)

    Yoshida, M.

    2010-12-01

    A new numerical simulation model of mantle convection with a compositionally and rheologically heterogeneous, deformable, mobile continental lithosphere is presented for the first time by using three-dimensional regional spherical-shell geometry (Yoshida, 2010, Earth Planet. Sci. Lett.). The numerical results revealed that one of major factor that realizes the supercontinental breakup and subsequent continental drift is a pre-existing, weak (low-viscosity) continental margin (WCM) in the supercontinent. Characteristic tectonic structures such as young orogenic belts and suture zones in a continent are expected to be mechanically weaker than the stable part of the continental lithosphere with the cratonic root (or cratonic lithosphere) and yield lateral viscosity variations in the continental lithosphere. In the present-day Earth's lithosphere, the pre-existing, mechanically weak zones emerge as a diffuse plate boundary. However, the dynamic role of the WCM in the stability of continental lithosphere has not been understood in terms of geophysics. In my numerical model, a compositionally buoyant and highly viscous continental assemblage with pre-existing WCMs, analogous to the past supercontinent, is modeled and imposed on well-developed mantle convection whose vigor of convection, internal heating rate, and rheological parameters are appropriate for the Earth's mantle. The visco-plastic oceanic lithosphere and the associated subduction of oceanic plates are incorporated. The time integration of the advection of continental materials with zero chemical diffusion is performed by a tracer particle method. The time evolution of mantle convection after setting the model supercontinent is followed over 800 Myr. Earth-like continental drift is successfully reproduced, and the characteristic thermal interaction between the mantle and the continent/supercontinent is observed in my new numerical model. Results reveal that the WCM protects the cratonic lithosphere from being

  5. Three-Dimensional Numerical Simulation to Mud Turbine for LWD

    Science.gov (United States)

    Yao, Xiaojiang; Dong, Jingxin; Shang, Jie; Zhang, Guanqi

    Hydraulic performance analysis was discussed for a type of turbine on generator used for LWD. The simulation models were built by CFD analysis software FINE/Turbo, and full three-dimensional numerical simulation was carried out for impeller group. The hydraulic parameter such as power, speed and pressure drop, were calculated in two kinds of medium water and mud. Experiment was built in water environment. The error of numerical simulation was less than 6%, verified by experiment. Based on this rationalization proposals would be given to choice appropriate impellers, and the rationalization of methods would be explored.

  6. Study of the Evolution of the Electric Structure of a Convective Cloud Using the Data of a Numerical Nonstationary Three-Dimensional Model

    Science.gov (United States)

    Veremey, N. E.; Dovgalyuk, Yu. A.; Zatevakhin, M. A.; Ignatyev, A. A.; Morozov, V. N.

    2014-04-01

    Numerical nonstationary three-dimensional model of a convective cloud with parameterized description of microphysical processes with allowance for the electrization processes is considered. The results of numerical modeling of the cloud evolution for the specified atmospheric conditions are presented. The spatio-temporal distribution of the main cloud characteristics including the volume charge density and the electric field is obtained. The calculation results show that the electric structure of the cloud is different at its various life stages, i.e., it varies from unipolar to dipolar and then to tripolar. This conclusion is in fair agreement with the field studies.

  7. A full three dimensional Navier-Stokes numerical simulation of flow field inside a power plant Kaplan turbine using some model test turbine hill chart points

    Science.gov (United States)

    Hosseinalipour, S. M.; Raja, A.; Hajikhani, S.

    2012-06-01

    A full three dimensional Navier - Stokes numerical simulation has been performed for performance analysis of a Kaplan turbine which is installed in one of the Irans south dams. No simplifications have been enforced in the simulation. The numerical results have been evaluated using some integral parameters such as the turbine efficiency via comparing the results with existing experimental data from the prototype Hill chart. In part of this study the numerical simulations were performed in order to calculate the prototype turbine efficiencies in some specific points which comes from the scaling up of the model efficiency that are available in the model experimental Hill chart. The results are very promising which shows the good ability of the numerical techniques for resolving the flow characteristics in these kind of complex geometries. A parametric study regarding the evaluation of turbine performance in three different runner angles of the prototype is also performed and the results are cited in this paper.

  8. Development of three dimensional solid modeler

    International Nuclear Information System (INIS)

    Zahoor, R.M.A.

    1999-01-01

    The work presented in this thesis is aimed at developing a three dimensional solid modeler employing computer graphics techniques using C-Language. Primitives have been generated, by combination of plane surfaces, for various basic geometrical shapes including cylinder, cube and cone. Back face removal technique for hidden surface removal has also been incorporated. Various transformation techniques such as scaling, translation, and rotation have been included for the object animation. Three dimensional solid modeler has been created by the union of two primitives to demonstrate the capabilities of the developed program. (author)

  9. Three-dimensional numerical modeling of the influence of faults on groundwater flow at Yucca Mountain, Nevada

    Energy Technology Data Exchange (ETDEWEB)

    Cohen, Andrew J.B. [Univ. of California, Berkeley, CA (United States)

    1999-06-01

    Numerical simulations of groundwater flow at Yucca Mountain, Nevada are used to investigate how the faulted hydrogeologic structure influences groundwater flow from a proposed high-level nuclear waste repository. Simulations are performed using a 3-D model that has a unique grid block discretization to accurately represent the faulted geologic units, which have variable thicknesses and orientations. Irregular grid blocks enable explicit representation of these features. Each hydrogeologic layer is discretized into a single layer of irregular and dipping grid blocks, and faults are discretized such that they are laterally continuous and displacement varies along strike. In addition, the presence of altered fault zones is explicitly modeled, as appropriate. The model has 23 layers and 11 faults, and approximately 57,000 grid blocks and 200,000 grid block connections. In the past, field measurement of upward vertical head gradients and high water table temperatures near faults were interpreted as indicators of upwelling from a deep carbonate aquifer. Simulations show, however, that these features can be readily explained by the geometry of hydrogeologic layers, the variability of layer permeabilities and thermal conductivities, and by the presence of permeable fault zones or faults with displacement only. In addition, a moderate water table gradient can result from fault displacement or a laterally continuous low permeability fault zone, but not from a high permeability fault zone, as others postulated earlier. Large-scale macrodispersion results from the vertical and lateral diversion of flow near the contact of high and low permeability layers at faults, and from upward flow within high permeability fault zones. Conversely, large-scale channeling can occur due to groundwater flow into areas with minimal fault displacement. Contaminants originating at the water table can flow in a direction significantly different than that of the water table gradient, and isolated

  10. Three-dimensional numerical modeling of the influence of faults on groundwater flow at Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Cohen, Andrew J.B.

    1999-01-01

    Numerical simulations of groundwater flow at Yucca Mountain, Nevada are used to investigate how the faulted hydrogeologic structure influences groundwater flow from a proposed high-level nuclear waste repository. Simulations are performed using a 3-D model that has a unique grid block discretization to accurately represent the faulted geologic units, which have variable thicknesses and orientations. Irregular grid blocks enable explicit representation of these features. Each hydrogeologic layer is discretized into a single layer of irregular and dipping grid blocks, and faults are discretized such that they are laterally continuous and displacement varies along strike. In addition, the presence of altered fault zones is explicitly modeled, as appropriate. The model has 23 layers and 11 faults, and approximately 57,000 grid blocks and 200,000 grid block connections. In the past, field measurement of upward vertical head gradients and high water table temperatures near faults were interpreted as indicators of upwelling from a deep carbonate aquifer. Simulations show, however, that these features can be readily explained by the geometry of hydrogeologic layers, the variability of layer permeabilities and thermal conductivities, and by the presence of permeable fault zones or faults with displacement only. In addition, a moderate water table gradient can result from fault displacement or a laterally continuous low permeability fault zone, but not from a high permeability fault zone, as others postulated earlier. Large-scale macrodispersion results from the vertical and lateral diversion of flow near the contact of high and low permeability layers at faults, and from upward flow within high permeability fault zones. Conversely, large-scale channeling can occur due to groundwater flow into areas with minimal fault displacement. Contaminants originating at the water table can flow in a direction significantly different than that of the water table gradient, and isolated

  11. Three dimensional transport model for toroidal plasmas

    International Nuclear Information System (INIS)

    Copenhauer, C.

    1980-12-01

    A nonlinear MHD model, developed for three-dimensional toroidal geometries (asymmetric) and for high β (β approximately epsilon), is used as a basis for a three-dimensional transport model. Since inertia terms are needed in describing evolving magnetic islands, the model can calculate transport, both in the transient phase before nonlinear saturation of magnetic islands and afterwards on the resistive time scale. In the β approximately epsilon ordering, the plasma does not have sufficient energy to compress the parallel magnetic field, which allows the Alfven wave to be eliminated in the reduced nonlinear equations, and the model then follows the slower time scales. The resulting perpendicular and parallel plasma drift velocities can be identified with those of guiding center theory

  12. Three-Dimensional Numerical Modelling of Flow and Sediment Transport for Field Scale Application of Stream Barbs at Sawmill Creek, Ottawa

    Science.gov (United States)

    Jamieson, E. C.; Rennie, C. D.; Townsend, R. D.

    2009-05-01

    Stream barbs (a type of submerged groyne or spur dike) are low-profile linear rock structures that prevent the erosion of stream banks by redirecting high velocity flow away from the bank. Stream barbs are becoming a popular method for stream bank protection as they can be built at a relatively low cost and provide added ecological benefit. The design and construction of stream barbs in Sawmill Creek, a small urban stream in the city of Ottawa, Canada, will serve as a demonstration project for the use of barbs as a bank stabilization technique that will contribute to the rehabilitation of urban creeks while reducing erosion threats to property and infrastructure. As well as providing bank protection, these structures promote vegetated stream banks, create resting pools and scour holes for fish habitat, and increase bio-diversity for aquatic species. Despite these benefits, stream barbs are not a common means of stream bank protection in Canada, due largely to a lack of suitable design guidelines. The overall goal of stream habitat restoration in incising channel systems should be to accelerate natural processes of channel equilibrium recovery, riparian re-vegetation, and stream-floodplain interaction. Incorporating stream barbs, instead of traditional bank protection measures, attempts to achieve these goals. A three-dimensional numerical model: 'Simulation in Intakes with Multiblock option' (SSIIM), was used to model the effects of placing a series of stream barbs along an unstable section of Sawmill Creek. The average bankfull depth, width, and discharge of the creek are 1.2 m, 7.5 m, and 9 m3/s respectively. The model was used to assess various design alternatives for a series of seven stream barbs at two consecutive channel bends requiring stabilization measures along their outer banks. Design criteria were principally based on the reduction of velocity, shear stress and subsequent erosion at the outside bank of each bend, and on the relocation of a new thalweg

  13. Three dimensional numerical modeling for investigation of fracture zone filled with water by borehole radar; Borehole radar ni yoru gansui hasaitai kenshutsu no sanjigen suchi modeling

    Energy Technology Data Exchange (ETDEWEB)

    Sanada, Y; Watanabe, T; Ashida, Y [Kyoto University, Kyoto (Japan); Hasegawa, K; Yabuuchi, S [Power Reactor and Nuclear Fuel Development Corp., Tokyo (Japan)

    1997-05-27

    Water bearing fracture zones existing in rock mass largely influence the underground water flow and dynamic property of rock mass. The detailed survey of the location and size of water bearing fracture zones is an important task in the fields such as civil engineering, environment and disaster prevention. Electromagnetic waves of high frequency zones can be grasped as a wave phenomenon, and the record obtained in the actual measurement is wave forms of time series. In the exploration using borehole radar, this water bearing fracture zone becomes the reflection surface, and also becomes a factor of damping in the transmitted wave. By examining changes which these give to the observed wave forms, therefore, water bearing fracture zones can be detected. This study made three dimensional numerical modeling using the time domain finite difference method, and obtained the same output as the observed wave form obtained using borehole radar. By using this program and changing each of the parameters such as frequency and resistivity in the homogeneous medium, changes of the wave forms were observed. Further, examples were shown of modeling of detection of water bearing fracture zones. 5 refs., 16 figs., 1 tab.

  14. Specifications for the development of a fully three-dimensional numerical groundwater model for regional mass transport of radionuclides from a deep waste repository

    Energy Technology Data Exchange (ETDEWEB)

    Prickett, T.A.

    1980-04-01

    Specifications are given which are necessary to develop a three-dimensional numerical model capable of simulating regional mass transport of radionuclides from a deep waste repository. The model to be developed will include all of the significant mass transport processes including flow, chemical, and thermal advection, mechanical dispersion, molecular diffusion, ion exchange reactions, and radioactive decay. The model specifications also include that density and viscosity fluid properties be functions of pressure, temperature, and concentration and take into account fluid and geologic heterogenieties by allowing possible assignment of individual values to every block of the model. The model specifications furthermore include the repository shape, input/output information, boundary conditions, and the need for documentation and a user's manual. Model code validation can be accomplished with the included known analytical or laboratory solutions. It is recommended that an existing finite-difference model (developed by INTERCOMP and INTERA, Inc.) be used as a starting point either as an acceptable basic code for modification or as a pattern for the development of a completely different numerical scheme. A ten-step plan is given to outline the general procedure for development of the code.

  15. Specifications for the development of a fully three-dimensional numerical groundwater model for regional mass transport of radionuclides from a deep waste repository

    International Nuclear Information System (INIS)

    Prickett, T.A.

    1980-04-01

    Specifications are given which are necessary to develop a three-dimensional numerical model capable of simulating regional mass transport of radionuclides from a deep waste repository. The model to be developed will include all of the significant mass transport processes including flow, chemical, and thermal advection, mechanical dispersion, molecular diffusion, ion exchange reactions, and radioactive decay. The model specifications also include that density and viscosity fluid properties be functions of pressure, temperature, and concentration and take into account fluid and geologic heterogenieties by allowing possible assignment of individual values to every block of the model. The model specifications furthermore include the repository shape, input/output information, boundary conditions, and the need for documentation and a user's manual. Model code validation can be accomplished with the included known analytical or laboratory solutions. It is recommended that an existing finite-difference model (developed by INTERCOMP and INTERA, Inc.) be used as a starting point either as an acceptable basic code for modification or as a pattern for the development of a completely different numerical scheme. A ten-step plan is given to outline the general procedure for development of the code

  16. A numerical study of three-dimensional droplets spreading on chemically patterned surfaces

    KAUST Repository

    Zhong, Hua; Wang, Xiao-Ping; Sun, Shuyu

    2016-01-01

    We study numerically the three-dimensional droplets spreading on physically flat chemically patterned surfaces with periodic squares separated by channels. Our model consists of the Navier-Stokes-Cahn-Hilliard equations with the generalized Navier

  17. Three-dimensional computer models of electrospinning systems

    Directory of Open Access Journals (Sweden)

    Smółka Krzysztof

    2017-12-01

    Full Text Available Electrospinning is a very interesting method that allows the fabrication of continuous fibers with diameters down to a few nanometers. This paper presents an overview of electrospinning systems as well as their comparison using proposed three-dimensional parameterized numerical models. The presented solutions allow an analysis of the electric field distribution.

  18. Numerical Simulation for a Three-Dimensional Air Pollution Measurement Model in a Heavy Traffic Area under the Bangkok Sky Train Platform

    Directory of Open Access Journals (Sweden)

    Kewalee Suebyat

    2018-01-01

    Full Text Available Air pollutant levels in Bangkok are generally high in street tunnels. They are particularly elevated in almost closed street tunnels such as an area under the Bangkok sky train platform with high traffic volume where dispersion is limited. There are no air quality measurement stations in the vicinity, while the human population is high. In this research, the numerical simulation is used to measure the air pollutant levels. The three-dimensional air pollution measurement model in a heavy traffic area under the Bangkok sky train platform is proposed. The finite difference techniques are employed to approximate the modelled solutions. The vehicle air pollutant emission due to the high traffic volume is mathematically assumed by the pollutant sources term. The simulation is also considered in averaged and moving pollutant sources due to manner vehicle emission. The proposed approximated air pollutant concentration indicators can be replaced by user required gaseous pollutants indices such as NOx, SO2, CO, and PM2.5.

  19. Multiscale modeling of three-dimensional genome

    Science.gov (United States)

    Zhang, Bin; Wolynes, Peter

    The genome, the blueprint of life, contains nearly all the information needed to build and maintain an entire organism. A comprehensive understanding of the genome is of paramount interest to human health and will advance progress in many areas, including life sciences, medicine, and biotechnology. The overarching goal of my research is to understand the structure-dynamics-function relationships of the human genome. In this talk, I will be presenting our efforts in moving towards that goal, with a particular emphasis on studying the three-dimensional organization, the structure of the genome with multi-scale approaches. Specifically, I will discuss the reconstruction of genome structures at both interphase and metaphase by making use of data from chromosome conformation capture experiments. Computationally modeling of chromatin fiber at atomistic level from first principles will also be presented as our effort for studying the genome structure from bottom up.

  20. Experimental and numerical models of three-dimensional gravity-driven flow of shear-thinning polymer solutions used in vaginal delivery of microbicides.

    Science.gov (United States)

    Kheyfets, Vitaly O; Kieweg, Sarah L

    2013-06-01

    HIV/AIDS is a growing global pandemic. A microbicide is a formulation of a pharmaceutical agent suspended in a delivery vehicle, and can be used by women to protect themselves against HIV infection during intercourse. We have developed a three-dimensional (3D) computational model of a shear-thinning power-law fluid spreading under the influence of gravity to represent the distribution of a microbicide gel over the vaginal epithelium. This model, accompanied by a new experimental methodology, is a step in developing a tool for optimizing a delivery vehicle's structure/function relationship for clinical application. We compare our model with experiments in order to identify critical considerations for simulating 3D free-surface flows of shear-thinning fluids. Here we found that neglecting lateral spreading, when modeling gravity-induced flow, resulted in up to 47% overestimation of the experimental axial spreading after 90 s. In contrast, the inclusion of lateral spreading in 3D computational models resulted in rms errors in axial spreading under 7%. In addition, the choice of the initial condition for shape in the numerical simulation influences the model's ability to describe early time spreading behavior. Finally, we present a parametric study and sensitivity analysis of the power-law parameters' influence on axial spreading, and to examine the impact of changing rheological properties as a result of dilution or formulation conditions. Both the shear-thinning index (n) and consistency (m) impacted the spreading length and deceleration of the moving front. The sensitivity analysis showed that gels with midrange m and n values (for the ranges in this study) would be most sensitive (over 8% changes in spreading length) to 10% changes (e.g., from dilution) in both rheological properties. This work is applicable to many industrial and geophysical thin-film flow applications of non-Newtonian fluids; in addition to biological applications in microbicide drug delivery.

  1. Three-dimensional numerical simulation during laser processing of CFRP

    Science.gov (United States)

    Ohkubo, Tomomasa; Sato, Yuji; Matsunaga, Ei-ichi; Tsukamoto, Masahiro

    2017-09-01

    We performed three-dimensional numerical simulation about laser processing of carbon-fiber-reinforced plastic (CFRP) using OpenFOAM as libraries of finite volume method (FVM). Although a little theoretical or numerical studies about heat affected zone (HAZ) formation were performed, there is no research discussing how HAZ is generated considering time development about removal of each material. It is important to understand difference of removal speed of carbon fiber and resin in order to improve quality of cut surface of CFRP. We demonstrated how the carbon fiber and resin are removed by heat of ablation plume by our simulation. We found that carbon fiber is removed faster than resin at first stage because of the difference of thermal conductivity, and after that, the resin is removed faster because of its low combustion temperature. This result suggests the existence of optimal contacting time of the laser ablation and kerf of the target.

  2. Development of three dimensional ocean current model for coastal region

    International Nuclear Information System (INIS)

    Kobayashi, Takuya

    1999-12-01

    In order to study the migration behavior of radionuclides released into a coastal region around Japan, Princeton Ocean Model (POM) was introduced. This three-dimensional ocean current model was modified to be applied for oceanic simulations around Japan. This report describes the governing equations, numerical methods and model improvements. In addition, database system which is utilized for calculations and visualization system for graphical outputs are also described. Model simulation was carried out at off the area of Shimokita. Aomori-ken, Japan to investigate the effects of the boundary conditions on simulated results. (author)

  3. Validation of a Numerical Model for Dynamic Three-Dimensional Railway Bridge Analysis by Comparison with a Small-Scale Laboratory Model

    DEFF Research Database (Denmark)

    Bucinskas, Paulius; Sneideris, Jonas; Agapii, Liuba

    2018-01-01

    The aim of the paper is analyse to what extent a small-scale experimental model can be applied in order to develop and validate a numerical model for dynamic analysis of a multi-span railway bridge interacting with the underlying soil. For this purpose a small-scale model of a bridge structure is...

  4. Three-dimensional magnetotelluric axial anisotropic forward modeling and inversion

    Science.gov (United States)

    Cao, Hui; Wang, Kunpeng; Wang, Tao; Hua, Boguang

    2018-06-01

    Magnetotelluric (MT) data has been widely used to image underground electrical structural. However, when the significant axial resistivity anisotropy presents, how this influences three-dimensional MT data has not been resolved clearly yet. We here propose a scheme for three-dimensional modeling of MT data in presence of axial anisotropic resistivity, where the electromagnetic fields are decomposed into primary and secondary components. A 3D staggered-grid finite difference method is then used to resolve the resulting 3D governing equations. Numerical tests have completed to validate the correctness and accuracy of the present algorithm. A limited-memory Broyden-Fletcher-Goldfarb-Shanno method is then utilized to realize the 3D MT axial anisotropic inversion. The testing results show that, compared to the results of isotropic resistivity inversion, taking account the axial anisotropy can much improve the inverted results.

  5. Numerical study on the three-dimensional scroll volute flow of centrifugal compressor

    International Nuclear Information System (INIS)

    Bae, Hwang; Chang, Keun Shik; Yoon, Ju Sig; Park, Ki Cheol

    2005-01-01

    Three dimensional turbulent flow in the scroll volute of centrifugal compressor has been numerically investigated in this paper by solving the Navier-Stokes equations and k -ε equation model. The computational grid for the flow field of the scroll volute has been constructed based on the multi-block grid, which is good to avoid the central grid singularity as well as to make grid stretching toward the volute wall. Numerical result has been obtained for the three-dimensional flow of scroll volute. The straight conical volute flow is also solved and compared with the scroll volute data. This comparison contributed to comprehend the effect of scroll in the three-dimensional volute flow of a centrifugal compressor

  6. Numerical Investigation of Three-dimensional Instability of Standing Waves

    Science.gov (United States)

    Zhu, Qiang; Liu, Yuming; Yue, Dick K. P.

    2002-11-01

    We study the three-dimensional instability of finite-amplitude standing waves under the influence of gravity using the transition matrix method. For accurate calculation of the transition matrices, we apply an efficient high-order spectral element method for nonlinear wave dynamics in complex domain. We consider two types of standing waves: (a) plane standing waves; and (b) standing waves in a circular tank. For the former, in addition to the confirmation of the side-band-like instability, we find a new three-dimensional instability for arbitrary base standing waves. The dominant component of the unstable disturbance is an oblique standing wave, with an arbitrary angle relative to the base flow, whose frequency is approximately equal to that of the base standing wave. Based on direct simulations, we confirm such a three-dimensional instability and show the occurrence of the Fermi-Pasta-Ulam recurrence phenomenon during nonlinear evolution. For the latter, we find that beyond a threshold wave steepness, the standing wave with frequency Ω becomes unstable to a small three-dimensional disturbance, which contains two dominant standing-wave components with frequencies ω1 and ω_2, provided that 2Ω ω1 + ω_2. The threshold wave steepness is found to decrease/increase as the radial/azimuthal wavenumber of the base standing wave increases. We show that the instability of standing waves in rectangular and circular tanks is caused by third-order quartet resonances between base flow and disturbance.

  7. Three dimensional numerical modeling for ground penetrating radar using finite difference time domain (FDTD) method; Jikan ryoiki yugen sabunho ni yoru chika radar no sanjigen suchi modeling

    Energy Technology Data Exchange (ETDEWEB)

    Sanada, Y; Ashida, Y; Sassa, K [Kyoto University, Kyoto (Japan)

    1996-10-01

    3-D numerical modeling by FDTD method was studied for ground penetrating radar. Radar radiates electromagnetic wave, and determines the existence and distance of objects by reflection wave. Ground penetrating radar uses the above functions for underground surveys, however, its resolution and velocity analysis accuracy are problems. In particular, propagation characteristics of electromagnetic wave in media such as heterogeneous and anisotropic soil and rock are essential. The behavior of electromagnetic wave in the ground could be precisely reproduced by 3-D numerical modeling using FDTD method. FDTD method makes precise analysis in time domain and electric and magnetic fields possible by sequentially calculating the difference equation of Maxwell`s equation. Because of the high calculation efficiency of FDTD method, more precise complicated analysis can be expected by using the latest advanced computers. The numerical model and calculation example are illustrated for surface type electromagnetic pulse ground penetrating radar assuming the survey of steel pipes of 1m deep. 4 refs., 3 figs., 1 tab.

  8. Accuracy of three-dimensional seismic ground response analysis in time domain using nonlinear numerical simulations

    Science.gov (United States)

    Liang, Fayun; Chen, Haibing; Huang, Maosong

    2017-07-01

    To provide appropriate uses of nonlinear ground response analysis for engineering practice, a three-dimensional soil column with a distributed mass system and a time domain numerical analysis were implemented on the OpenSees simulation platform. The standard mesh of a three-dimensional soil column was suggested to be satisfied with the specified maximum frequency. The layered soil column was divided into multiple sub-soils with a different viscous damping matrix according to the shear velocities as the soil properties were significantly different. It was necessary to use a combination of other one-dimensional or three-dimensional nonlinear seismic ground analysis programs to confirm the applicability of nonlinear seismic ground motion response analysis procedures in soft soil or for strong earthquakes. The accuracy of the three-dimensional soil column finite element method was verified by dynamic centrifuge model testing under different peak accelerations of the earthquake. As a result, nonlinear seismic ground motion response analysis procedures were improved in this study. The accuracy and efficiency of the three-dimensional seismic ground response analysis can be adapted to the requirements of engineering practice.

  9. Magnetic properties of three-dimensional Hubbard-sigma model

    International Nuclear Information System (INIS)

    Yamamoto, Hisashi; Ichinose, Ikuo; Tatara, Gen; Matsui, Tetsuo.

    1989-11-01

    It is broadly viewed that the magnetism may play an important role in the high-T c superconductivity in the lamellar CuO 2 materials. In this paper, based on a Hubbard-inspired CP 1 or S 2 nonlinear σ model, we give a quantitative study of some magnetic properties in and around the Neel ordered state of three-dimensional quantum antiferromagnets such as La 2 CuO 4 with and without small hole doping. Our model is a (3+1) dimensional effective field theory describing the low energy spin dynamics of a three-dimensional Hubbard model with a very weak interlayer coupling. The effect of hole dynamics is taken into account in the leading approximation by substituting the CP 1 coupling with an 'effective' one determined by the concentration and the one-loop correction of hole fermions. A stationary-phase equation for the one-loop effective potential of S 2 model is analyzed numerically. The behavior of Neel temperature, magnetization (long range Neel order), spin correlation length, etc as functions of anisotropic parameter, temperature, hole concentrations, etc are investigated in detail. A phase diagram is also supported by the renormlization group analysis. The results show that our anisotropic field theory model with certain values of parameters could give a reasonably well description of the magnetic properties indicated by some experiments on pure and doped La 2 CuO 4 . (author)

  10. A three-dimensional constitutive model for shape memory alloy

    International Nuclear Information System (INIS)

    Zhou, Bo; Yoon, Sung-Ho; Leng, Jin-Song

    2009-01-01

    Shape memory alloy (SMA) has a wide variety of practical applications due to its unique super-elasticity and shape memory effect. It is of practical interest to establish a constitutive model which predicts its phase transformation and mechanical behaviors. In this paper, a new three-dimensional phase transformation equation, which predicts the phase transformation behaviors of SMA, is developed based on the results of a differential scanning calorimetry (DSC) test. It overcomes both limitations: that Zhou's phase transformation equations fail to describe the phase transformation from twinned martensite to detwinned martensite of SMA and Brinson's phase transformation equation fails to express the influences of phase transformation peak temperatures on the phase transformation behaviors of SMA. A new three-dimensional constitutive equation, which predicts the mechanical behaviors associated with the super-elasticity and shape memory effect of SMA, is developed on the basis of thermodynamics and solid mechanics. Results of numerical simulations show that the new constitutive model, which includes the new phase transformation equation and constitutive equation, can predict the phase transformation and mechanical behaviors associated with the super-elasticity and shape memory effect of SMA precisely and comprehensively. It is proved that Brinson's constitutive model of SMA can be considered as one special case of the new constitutive model

  11. Three-dimensional numerical modeling and computational fluid dynamics simulations to analyze and improve oxygen availability in the AMC bioartificial liver

    NARCIS (Netherlands)

    Mareels, Guy; Poyck, Paul P. C.; Eloot, Sunny; Chamuleau, Robert A. F. M.; Verdonck, Pascal R.

    2006-01-01

    A numerical model to investigate fluid flow and oxygen (O(2)) transport and consumption in the AMC-Bioartificial Liver (AMC-BAL) was developed and applied to two representative micro models of the AMC-BAL with two different gas capillary patterns, each combined with two proposed hepatocyte

  12. Numerical solution of three-dimensional magnetic differential equations

    International Nuclear Information System (INIS)

    Reiman, A.H.; Greenside, H.S.

    1987-02-01

    A computer code is described that solves differential equations of the form B . del f = h for a single-valued solution f, given a toroidal three-dimensional divergence-free field B and a single-valued function h. The code uses a new algorithm that Fourier decomposes a given function in a set of flux coordinates in which the field lines are straight. The algorithm automatically adjusts the required integration lengths to compensate for proximity to low order rational surfaces. Applying this algorithm to the Cartesian coordinates defines a transformation to magnetic coordinates, in which the magnetic differential equation can be accurately solved. Our method is illustrated by calculating the Pfirsch-Schlueter currents for a stellarator

  13. High-order accurate numerical algorithm for three-dimensional transport prediction

    Energy Technology Data Exchange (ETDEWEB)

    Pepper, D W [Savannah River Lab., Aiken, SC; Baker, A J

    1980-01-01

    The numerical solution of the three-dimensional pollutant transport equation is obtained with the method of fractional steps; advection is solved by the method of moments and diffusion by cubic splines. Topography and variable mesh spacing are accounted for with coordinate transformations. First estimate wind fields are obtained by interpolation to grid points surrounding specific data locations. Numerical results agree with results obtained from analytical Gaussian plume relations for ideal conditions. The numerical model is used to simulate the transport of tritium released from the Savannah River Plant on 2 May 1974. Predicted ground level air concentration 56 km from the release point is within 38% of the experimentally measured value.

  14. Three-dimensional model analysis and processing

    CERN Document Server

    Yu, Faxin; Luo, Hao; Wang, Pinghui

    2011-01-01

    This book focuses on five hot research directions in 3D model analysis and processing in computer science:  compression, feature extraction, content-based retrieval, irreversible watermarking and reversible watermarking.

  15. Discretization model for nonlinear dynamic analysis of three dimensional structures

    International Nuclear Information System (INIS)

    Hayashi, Y.

    1982-12-01

    A discretization model for nonlinear dynamic analysis of three dimensional structures is presented. The discretization is achieved through a three dimensional spring-mass system and the dynamic response obtained by direct integration of the equations of motion using central diferences. First the viability of the model is verified through the analysis of homogeneous linear structures and then its performance in the analysis of structures subjected to impulsive or impact loads, taking into account both geometrical and physical nonlinearities is evaluated. (Author) [pt

  16. Three-dimensional model for fusion processes

    International Nuclear Information System (INIS)

    Olson, A.P.

    1984-01-01

    Active galactic nuclei (AGN) emit unusual spectra of radiation which is interpreted to signify extreme distance, extreme power, or both. The status of AGNs was recently reviewed by Balick and Heckman. It seems that the greatest conceptual difficulty with understanding AGNs is how to form a coherent phenomenological model of their properties. What drives the galactic engine. What and where are the mass-flows of fuel to this engine. Are there more than one engine. Do the engines have any symmetry properties. Is observed radiation isotropically emitted from the source. If it is polarized, what causes the polarization. Why is there a roughly spherical cloud of ionized gas about the center of our own galaxy, the Milky Way. The purpose of this paper is to discuss a new model, based on fusion processes which are not axisymmetric, uniform, isotropic, or even time-invariant. Then, the relationship to these questions will be developed. A unified model of fusion processes applicable to many astronomical phenomena will be proposed and discussed

  17. [Three-dimensional modeling of mandibular distraction].

    Science.gov (United States)

    Morgon, L A; Trunde, F; Coudert, J L; Disant, F

    2003-12-01

    Facial hemi-atrophy affects 1 in 4000 or 5000 children. We propose treating this deformation of the 1st branchial arch with the "bone distraction" lengthening technique first described by Ilizarov in the 1950s, which has already been employed with the mandible. We have modelled mandibular distraction in facial hemi-atrophy patients and discuss the benefits of such pre-surgical planning encompassing the assistance of pre- and post-operative as well as surgically coordinated orthodontic therapy. Using X scanner views of a 5 year-old girl patient, we have developed a distraction-simulation software, which makes the pathological side harmonious with the healthy side along the medial sagittal plane. In order to obtain facial symmetry, put bones in balance, and orient the occlusal plane horizontally, essential requisites of occlusal stability, it is necessary: to employ a 2 or 3-dimensional distractor, to pre-plan the distraction and screw positioning, to set up a fixed orthodontic treatment plan prior to beginning distraction therapy.

  18. Experimental Validation of a Numerical Model for Three-Dimensional High-Speed Railway Bridge Analysis by Comparison with a Small-Scale Model

    DEFF Research Database (Denmark)

    Sneideris, J.; Bucinskas, Paulius; Agapii, L.

    2015-01-01

    The aim of this paper is to perform dynamic analysis of a multi-span railway bridge interacting with the underlying soil. A small-scale model of a bridge structure is constructed for experimental testing and the results are compared with a computational model. The computational model in this paper...... dimensional 10-degrees-of-freedom system. The subsoil model utilizes Green’s function for a horizontally layered half-space. The small-scale experimental model consists of bridge deck, columns and footings which are made from Plexiglas. An electric vehicle travels along the bridge deck on a track to simulate...

  19. Standalone visualization tool for three-dimensional DRAGON geometrical models

    International Nuclear Information System (INIS)

    Lukomski, A.; McIntee, B.; Moule, D.; Nichita, E.

    2008-01-01

    DRAGON is a neutron transport and depletion code able to solve one-, two- and three-dimensional problems. To date DRAGON provides two visualization modules, able to represent respectively two- and three-dimensional geometries. The two-dimensional visualization module generates a postscript file, while the three dimensional visualization module generates a MATLAB M-file with instructions for drawing the tracks in the DRAGON TRACKING data structure, which implicitly provide a representation of the geometry. The current work introduces a new, standalone, tool based on the open-source Visualization Toolkit (VTK) software package which allows the visualization of three-dimensional geometrical models by reading the DRAGON GEOMETRY data structure and generating an axonometric image which can be manipulated interactively by the user. (author)

  20. Numerical method for three dimensional steady-state two-phase flow calculations

    International Nuclear Information System (INIS)

    Raymond, P.; Toumi, I.

    1992-01-01

    This paper presents the numerical scheme which was developed for the FLICA-4 computer code to calculate three dimensional steady state two phase flows. This computer code is devoted to steady state and transient thermal hydraulics analysis of nuclear reactor cores 1,3 . The first section briefly describes the FLICA-4 flow modelling. Then in order to introduce the numerical method for steady state computations, some details are given about the implicit numerical scheme based upon an approximate Riemann solver which was developed for calculation of flow transients. The third section deals with the numerical method for steady state computations, which is derived from this previous general scheme and its optimization. We give some numerical results for steady state calculations and comparisons on required CPU time and memory for various meshing and linear system solvers

  1. Three-dimensional modelling and three-dimensional printing in pediatric and congenital cardiac surgery.

    Science.gov (United States)

    Kiraly, Laszlo

    2018-04-01

    Three-dimensional (3D) modelling and printing methods greatly support advances in individualized medicine and surgery. In pediatric and congenital cardiac surgery, personalized imaging and 3D modelling presents with a range of advantages, e.g., better understanding of complex anatomy, interactivity and hands-on approach, possibility for preoperative surgical planning and virtual surgery, ability to assess expected results, and improved communication within the multidisciplinary team and with patients. 3D virtual and printed models often add important new anatomical findings and prompt alternative operative scenarios. For the lack of critical mass of evidence, controlled randomized trials, however, most of these general benefits remain anecdotal. For an individual surgical case-scenario, prior knowledge, preparedness and possibility of emulation are indispensable in raising patient-safety. It is advocated that added value of 3D printing in healthcare could be raised by establishment of a multidisciplinary centre of excellence (COE). Policymakers, research scientists, clinicians, as well as health care financers and local entrepreneurs should cooperate and communicate along a legal framework and established scientific guidelines for the clinical benefit of patients, and towards financial sustainability. It is expected that besides the proven utility of 3D printed patient-specific anatomical models, 3D printing will have a major role in pediatric and congenital cardiac surgery by providing individually customized implants and prostheses, especially in combination with evolving techniques of bioprinting.

  2. Three-dimensional deformation response of a NiTi shape memory helical-coil actuator during thermomechanical cycling: experimentally validated numerical model

    Science.gov (United States)

    Dhakal, B.; Nicholson, D. E.; Saleeb, A. F.; Padula, S. A., II; Vaidyanathan, R.

    2016-09-01

    Shape memory alloy (SMA) actuators often operate under a complex state of stress for an extended number of thermomechanical cycles in many aerospace and engineering applications. Hence, it becomes important to account for multi-axial stress states and deformation characteristics (which evolve with thermomechanical cycling) when calibrating any SMA model for implementation in large-scale simulation of actuators. To this end, the present work is focused on the experimental validation of an SMA model calibrated for the transient and cyclic evolutionary behavior of shape memory Ni49.9Ti50.1, for the actuation of axially loaded helical-coil springs. The approach requires both experimental and computational aspects to appropriately assess the thermomechanical response of these multi-dimensional structures. As such, an instrumented and controlled experimental setup was assembled to obtain temperature, torque, degree of twist and extension, while controlling end constraints during heating and cooling of an SMA spring under a constant externally applied axial load. The computational component assesses the capabilities of a general, multi-axial, SMA material-modeling framework, calibrated for Ni49.9Ti50.1 with regard to its usefulness in the simulation of SMA helical-coil spring actuators. Axial extension, being the primary response, was examined on an axially-loaded spring with multiple active coils. Two different conditions of end boundary constraint were investigated in both the numerical simulations as well as the validation experiments: Case (1) where the loading end is restrained against twist (and the resulting torque measured as the secondary response) and Case (2) where the loading end is free to twist (and the degree of twist measured as the secondary response). The present study focuses on the transient and evolutionary response associated with the initial isothermal loading and the subsequent thermal cycles under applied constant axial load. The experimental

  3. Numerical simulation of three-dimensional fields of Chernobyl's radionuclides in the Kiev water reservoir

    International Nuclear Information System (INIS)

    Zheleznyak, M.I.; Margvelashvili, N.Yu.

    1997-01-01

    On the base of the three-dimensional numerical model of water circulation and radionuclide transport, the high flood water influence on the radionuclide dispersion in the Kiev water reservoir is studied. The model was verified on the base of data of the measurements of moderate flood phenomena in April-May 1987. Redistribution of the bottom sediment contamination is demonstrated. It is shown that even an extremely high flood water discharge does not change drastically the 137 Cs concentration in the water body of the Kiev water reservoir

  4. THREE DIMENSIONAL CFD MODELLING OF FLOW STRUCTURE IN COMPOUND CHANNELS

    Directory of Open Access Journals (Sweden)

    Usman Ghani

    2010-10-01

    Full Text Available The computational modeling of three dimensional flows in a meandering compound channel has been performed in this research work. The flow calculations are performed by solving 3D steady state continuity and Reynolds averaged Navier-Stokes equations. The turbulence closure is approximated with standard - turbulence model. The model equations are solved numerically with a general purpose software package. A comprehensive validation of the simulated results against the experimental data and a demonstration that the software used in this study has matured enough for investigating practical engineering problems are the major contributions of this paper. The model was initially validated. This was achieved by computing streamwise point velocities at different depths of various sections and depth averaged velocities at three cross sections along the main channel and comparing these results with experimental data. After the validation of the model, predictions were made for different flow parameters including velocity contours at the surface, pressure distribution, turbulence intensity etc. The results gave an overall understanding of these flow variables in meandering channels. The simulation also established the good prediction capability of the standard - turbulence model for flows in compound channels.

  5. Modeling emissions for three-dimensional atmospheric chemistry transport models.

    Science.gov (United States)

    Matthias, Volker; Arndt, Jan A; Aulinger, Armin; Bieser, Johannes; Denier Van Der Gon, Hugo; Kranenburg, Richard; Kuenen, Jeroen; Neumann, Daniel; Pouliot, George; Quante, Markus

    2018-01-24

    Poor air quality is still a threat for human health in many parts of the world. In order to assess measures for emission reductions and improved air quality, three-dimensional atmospheric chemistry transport modeling systems are used in numerous research institutions and public authorities. These models need accurate emission data in appropriate spatial and temporal resolution as input. This paper reviews the most widely used emission inventories on global and regional scale and looks into the methods used to make the inventory data model ready. Shortcomings of using standard temporal profiles for each emission sector are discussed and new methods to improve the spatio-temporal distribution of the emissions are presented. These methods are often neither top-down nor bottom-up approaches but can be seen as hybrid methods that use detailed information about the emission process to derive spatially varying temporal emission profiles. These profiles are subsequently used to distribute bulk emissions like national totals on appropriate grids. The wide area of natural emissions is also summarized and the calculation methods are described. Almost all types of natural emissions depend on meteorological information, which is why they are highly variable in time and space and frequently calculated within the chemistry transport models themselves. The paper closes with an outlook for new ways to improve model ready emission data, for example by using external databases about road traffic flow or satellite data to determine actual land use or leaf area. In a world where emission patterns change rapidly, it seems appropriate to use new types of statistical and observational data to create detailed emission data sets and keep emission inventories up-to-date. Emission data is probably the most important input for chemistry transport model (CTM) systems. It needs to be provided in high temporal and spatial resolution and on a grid that is in agreement with the CTM grid. Simple

  6. Advanced numerical methods for three dimensional two-phase flow calculations

    Energy Technology Data Exchange (ETDEWEB)

    Toumi, I. [Laboratoire d`Etudes Thermiques des Reacteurs, Gif sur Yvette (France); Caruge, D. [Institut de Protection et de Surete Nucleaire, Fontenay aux Roses (France)

    1997-07-01

    This paper is devoted to new numerical methods developed for both one and three dimensional two-phase flow calculations. These methods are finite volume numerical methods and are based on the use of Approximate Riemann Solvers concepts to define convective fluxes versus mean cell quantities. The first part of the paper presents the numerical method for a one dimensional hyperbolic two-fluid model including differential terms as added mass and interface pressure. This numerical solution scheme makes use of the Riemann problem solution to define backward and forward differencing to approximate spatial derivatives. The construction of this approximate Riemann solver uses an extension of Roe`s method that has been successfully used to solve gas dynamic equations. As far as the two-fluid model is hyperbolic, this numerical method seems very efficient for the numerical solution of two-phase flow problems. The scheme was applied both to shock tube problems and to standard tests for two-fluid computer codes. The second part describes the numerical method in the three dimensional case. The authors discuss also some improvements performed to obtain a fully implicit solution method that provides fast running steady state calculations. Such a scheme is not implemented in a thermal-hydraulic computer code devoted to 3-D steady-state and transient computations. Some results obtained for Pressurised Water Reactors concerning upper plenum calculations and a steady state flow in the core with rod bow effect evaluation are presented. In practice these new numerical methods have proved to be stable on non staggered grids and capable of generating accurate non oscillating solutions for two-phase flow calculations.

  7. Advanced numerical methods for three dimensional two-phase flow calculations

    International Nuclear Information System (INIS)

    Toumi, I.; Caruge, D.

    1997-01-01

    This paper is devoted to new numerical methods developed for both one and three dimensional two-phase flow calculations. These methods are finite volume numerical methods and are based on the use of Approximate Riemann Solvers concepts to define convective fluxes versus mean cell quantities. The first part of the paper presents the numerical method for a one dimensional hyperbolic two-fluid model including differential terms as added mass and interface pressure. This numerical solution scheme makes use of the Riemann problem solution to define backward and forward differencing to approximate spatial derivatives. The construction of this approximate Riemann solver uses an extension of Roe's method that has been successfully used to solve gas dynamic equations. As far as the two-fluid model is hyperbolic, this numerical method seems very efficient for the numerical solution of two-phase flow problems. The scheme was applied both to shock tube problems and to standard tests for two-fluid computer codes. The second part describes the numerical method in the three dimensional case. The authors discuss also some improvements performed to obtain a fully implicit solution method that provides fast running steady state calculations. Such a scheme is not implemented in a thermal-hydraulic computer code devoted to 3-D steady-state and transient computations. Some results obtained for Pressurised Water Reactors concerning upper plenum calculations and a steady state flow in the core with rod bow effect evaluation are presented. In practice these new numerical methods have proved to be stable on non staggered grids and capable of generating accurate non oscillating solutions for two-phase flow calculations

  8. Three-dimensional models of the tracheostoma using stereolithography

    NARCIS (Netherlands)

    Grolman, W.; Schouwenburg, P. F.; Verbeeten, B.; de Boer, M. F.; Meeuwis, C. A.

    1995-01-01

    The availability of an accurate three-dimensional (3-D) model of the tracheostoma and trachea of the laryngectomy patient would be of great help in prototyping of endotracheal prostheses. Stereolithography has been described for skull and jaw models but never for soft-tissue reconstructions of the

  9. A comprehensive three-dimensional model of the cochlea

    International Nuclear Information System (INIS)

    Givelberg, Edward; Bunn, Julian

    2003-01-01

    The human cochlea is a remarkable device, able to discern extremely small amplitude sound pressure waves, and discriminate between very close frequencies. Simulation of the cochlea is computationally challenging due to its complex geometry, intricate construction and small physical size. We have developed, and are continuing to refine, a detailed three-dimensional computational model based on an accurate cochlear geometry obtained from physical measurements. In the model, the immersed boundary method is used to calculate the fluid-structure interactions produced in response to incoming sound waves. The model includes a detailed and realistic description of the various elastic structures present. In this paper, we describe the computational model and its performance on the latest generation of shared memory servers from Hewlett Packard. Using compiler generated threads and OpenMP directives, we have achieved a high degree of parallelism in the executable, which has made possible several large scale numerical simulation experiments that study the interesting features of the cochlear system. We show several results from these simulations, reproducing some of the basic known characteristics of cochlear mechanics

  10. Three-dimensional dust aerosol distribution and extinction climatology over northern Africa simulated with the ALADIN numerical prediction model from 2006 to 2010

    Science.gov (United States)

    Mokhtari, M.; Tulet, P.; Fischer, C.; Bouteloup, Y.; Bouyssel, F.; Brachemi, O.

    2015-08-01

    The seasonal cycle and optical properties of mineral dust aerosols in northern Africa were simulated for the period from 2006 to 2010 using the numerical atmospheric model ALADIN (Aire Limitée Adaptation dynamique Développement InterNational) coupled to the surface scheme SURFEX (SURFace EXternalisée). The particularity of the simulations is that the major physical processes responsible for dust emission and transport, as well as radiative effects, are taken into account on short timescales and at mesoscale resolution. The aim of these simulations is to quantify the dust emission and deposition, locate the major areas of dust emission and establish a climatology of aerosol optical properties in northern Africa. The mean monthly aerosol optical thickness (AOT) simulated by ALADIN is compared with the AOTs derived from the standard Dark Target (DT) and Deep Blue (DB) algorithms of the Aqua-MODIS (MODerate resolution Imaging Spectroradiometer) products over northern Africa and with a set of sun photometer measurements located at Banizoumbou, Cinzana, Soroa, Mbour and Cape Verde. The vertical distribution of dust aerosol represented by extinction profiles is also analysed using CALIOP (Cloud-Aerosol Lidar with Orthogonal Polarization) observations. The annual dust emission simulated by ALADIN over northern Africa is 878 Tg year-1. The Bodélé Depression appears to be the main area of dust emission in northern Africa, with an average estimate of about 21.6 Tg year-1. The simulated AOTs are in good agreement with satellite and sun photometer observations. The positions of the maxima of the modelled AOTs over northern Africa match the observed positions, and the ALADIN simulations satisfactorily reproduce the various dust events over the 2006-2010 period. The AOT climatology proposed in this paper provides a solid database of optical properties and consolidates the existing climatology over this region derived from satellites, the AERONET network and regional climate

  11. Three-Dimensional Modeling of Fracture Clusters in Geothermal Reservoirs

    Energy Technology Data Exchange (ETDEWEB)

    Ghassemi, Ahmad [Univ. of Oklahoma, Norman, OK (United States)

    2017-08-11

    The objective of this is to develop a 3-D numerical model for simulating mode I, II, and III (tensile, shear, and out-of-plane) propagation of multiple fractures and fracture clusters to accurately predict geothermal reservoir stimulation using the virtual multi-dimensional internal bond (VMIB). Effective development of enhanced geothermal systems can significantly benefit from improved modeling of hydraulic fracturing. In geothermal reservoirs, where the temperature can reach or exceed 350oC, thermal and poro-mechanical processes play an important role in fracture initiation and propagation. In this project hydraulic fracturing of hot subsurface rock mass will be numerically modeled by extending the virtual multiple internal bond theory and implementing it in a finite element code, WARP3D, a three-dimensional finite element code for solid mechanics. The new constitutive model along with the poro-thermoelastic computational algorithms will allow modeling the initiation and propagation of clusters of fractures, and extension of pre-existing fractures. The work will enable the industry to realistically model stimulation of geothermal reservoirs. The project addresses the Geothermal Technologies Office objective of accurately predicting geothermal reservoir stimulation (GTO technology priority item). The project goal will be attained by: (i) development of the VMIB method for application to 3D analysis of fracture clusters; (ii) development of poro- and thermoelastic material sub-routines for use in 3D finite element code WARP3D; (iii) implementation of VMIB and the new material routines in WARP3D to enable simulation of clusters of fractures while accounting for the effects of the pore pressure, thermal stress and inelastic deformation; (iv) simulation of 3D fracture propagation and coalescence and formation of clusters, and comparison with laboratory compression tests; and (v) application of the model to interpretation of injection experiments (planned by our

  12. Mathematical modeling of three-dimensional images in emission tomography

    International Nuclear Information System (INIS)

    Koblik, Yu.N.; Khugaev, A. V.; Mktchyan, G.A.; Ioannou, P.; Dimovasili, E.

    2002-01-01

    The model of processing results of three-dimensional measurements in positron-emissive tomograph is proposed in this work. The algorithm of construction and visualization of phantom objects of arbitrary shape was developed and its concrete realization in view of program packet for PC was carried out

  13. Three dimensional simulated modelling of diffusion capacitance of ...

    African Journals Online (AJOL)

    A three dimensional (3-D) simulated modelling was developed to analyse the excess minority carrier density in the base of a polycrystalline bifacial silicon solar cell. The concept of junction recombination velocity was ado-pted to quantify carrier flow through the junction, and to examine the solar cell diffusion capacitance for ...

  14. A three dimensional model of a vane rheometer

    International Nuclear Information System (INIS)

    Nazari, Behzad; Moghaddam, Ramin Heidari; Bousfield, Douglas

    2013-01-01

    Highlights: • FEM was used to calculate the isothermal flow parameters in a vane geometry. • Velocity, pressure and then stress fields were obtained. • Using total stress, shaft torque was calculated to compare with experimental data. • A modified cell Reynolds number and power number were used to study flow pattern. • A comparison between 2D and 3D modeling was done based on calculated torques. -- Abstract: Vane type geometries are often used in rheometers to avoid slippage between the sample and the fixtures. While yield stress and other rheological properties can be obtained with this geometry, a complete analysis of this complex flow field is lacking in the literature. In this work, a finite element method is used to calculate the isothermal flow parameters in a vane geometry. The method solves the mass and momentum continuity equations to obtain velocity, pressure and then stress fields. Using the total stress numerical data, we calculated the torque applied on solid surfaces. The validity of the computational model was established by comparing the results to experimental results of shaft torque at different angular velocities. The conditions where inertial terms become important and the linear relationship between torque and stress are quantified with dimensionless groups. The accuracy of a two dimensional analysis is compared to the three dimensional results

  15. Preliminary result of a three dimensional numerical simulation of cloud formation over a cooling pond

    International Nuclear Information System (INIS)

    Yamada, T.

    1978-01-01

    Cooling ponds receive large amounts of waste heat from industrial sources and release the heat to the atmosphere. These large area sources of warm and moist air may have significant inadvertent effects. This paper is a preliminary step in the development of a method for estimating the perturbations in the atmosphere produced by a cooling pond. A three-dimensional numerical model based on turbulence second-moment closure equations and Gaussian cloud relations has been developed. A simplified version of the model, in which only turbulent energy and length-scale equations are solved prognostically, is used. Numerical simulations are conducted using as boundary conditions the data from a cooling pond study conducted in northern Illinois during the winter of 1976-1977. Preliminary analyses of these simulations indicate that formation of clouds over a cooling pond is sensitive to the moisture content in the ambient atmosphere

  16. Three-Dimensional Numerical Simulation of Plate Forming by Line Heating

    DEFF Research Database (Denmark)

    Clausen, Henrik Bisgaard

    1999-01-01

    addressed the problem of simulating the process, and although very few have been successful in gaining accurate results valuable information about the mechanics have been derived. However, the increasing power of computers now allows for numerical simulations of the forming process using a three......Line Heating is the process of forming (steel) plates into shape by means of localised heating often along a line. Though any focussed heat source will do, the inexpensive and widely available oxyacettylene gas torch is commonly applied in ship production.Over the years, many researchers have......-dimensional thermo-mechanical model. Although very few have been successful in gaining accurate results valuable information about the mechanics has been derived. However, the increasing power of computers now allows for numerical simulations of the forming process using a three-dimensional thermo-mechanical model....

  17. Three-Dimensional Analysis and Modeling of a Wankel Engine

    Science.gov (United States)

    Raju, M. S.; Willis, E. A.

    1991-01-01

    A new computer code, AGNI-3D, has been developed for the modeling of combustion, spray, and flow properties in a stratified-charge rotary engine (SCRE). The mathematical and numerical details of the new code are described by the first author in a separate NASA publication. The solution procedure is based on an Eulerian-Lagrangian approach where the unsteady, three-dimensional Navier-Stokes equations for a perfect gas-mixture with variable properties are solved in generalized, Eulerian coordinates on a moving grid by making use of an implicit finite-volume, Steger-Warming flux vector splitting scheme. The liquid-phase equations are solved in Lagrangian coordinates. The engine configuration studied was similar to existing rotary engine flow-visualization and hot-firing test rigs. The results of limited test cases indicate a good degree of qualitative agreement between the predicted and measured pressures. It is conjectured that the impulsive nature of the torque generated by the observed pressure nonuniformity may be one of the mechanisms responsible for the excessive wear of the timing gears observed during the early stages of the rotary combustion engine (RCE) development. It was identified that the turbulence intensities near top-dead-center were dominated by the compression process and only slightly influenced by the intake and exhaust processes. Slow mixing resulting from small turbulence intensities within the rotor pocket and also from a lack of formation of any significant recirculation regions within the rotor pocket were identified as the major factors leading to incomplete combustion. Detailed flowfield results during exhaust and intake, fuel injection, fuel vaporization, combustion, mixing and expansion processes are also presented. The numerical procedure is very efficient as it takes 7 to 10 CPU hours on a CRAY Y-MP for one entire engine cycle when the computations are performed over a 31 x16 x 20 grid.

  18. Three-dimensional Electromagnetic Modeling of the Hawaiian Swell

    Science.gov (United States)

    Avdeev, D.; Utada, H.; Kuvshinov, A.; Koyama, T.

    2004-12-01

    An anomalous behavior of the geomagnetic deep sounding (GDS) responses at the Honolulu geomagnetic observatory has been reported by many researchers. Kuvshinov et al (2004) found that the predicted GDS Dst C-response does not match the experimental data -- 10-20% disagreement occurs for all periods of 2 to 30 days, qualitatively implying a more resistive, rather than conductive, structure beneath the Hawaiian Islands. Simpson et al. (2000) found that the GDS Sq C-response at the Honolulu observatory is about 4 times larger than that at a Hawaii island site, again suggesting a more resistive (than elsewhere around) structure beneath the observatory. Constable and Heinson (2004, http://mahi.ucsd.edu/Steve/swell.pdf), presenting a 2-D interpretation of the magnetotelluric (MT) and GDS responses recently obtained at 7 seafloor sites to the south of the Hawaii Islands, concluded that the dataset require the presence of a narrow conducting plume just beneath the islands. The main motivation of our work is to reveal the reason of the anomalous behavior of the Honolulu response. Obviously, the cause may be due to heterogeneity of either the conductivity or the source field. We examine this problem in some detail with reference to the Constable and Heinson's seafloor dataset, as well as the available dataset from the Honolulu observatory. To address the problem we apply numerical modeling using the three-dimensional (3-D) forward modeling code of Avdeev et al. (1997, 2002). With this code we simulate various regional 3-D conductivity models that may produce EM responses that better fit the experimental datasets, at least qualitatively. Also, to explain some features of the experimental long-period GDS responses we numerically studied a possible effect in the responses caused by the equatorial electrojet. Our 3-D modeling results show that, in particular: (1) The GDS responses are better explained by models with a resistive lithosphere whereas the MT data are better fit by

  19. Three dimensional numerical simulation of a full scale CANDU reactor moderator to study temperature fluctuations

    International Nuclear Information System (INIS)

    Sarchami, Araz; Ashgriz, Nasser; Kwee, Marc

    2014-01-01

    Highlights: • 3D model of a Candu reactor is modeled to investigate flow distribution. • The results show the temperature distribution is not symmetrical. • Temperature contours show the hot regions at the top left-hand side of the tank. • Interactions of momentum flows and buoyancy flows create circulation zones. • The results indicate that the moderator tank operates in the buoyancy driven mode. -- Abstract: Three dimensional numerical simulations are conducted on a full scale CANDU Moderator and transient variations of the temperature and velocity distributions inside the tank are determined. The results show that the flow and temperature distributions inside the moderator tank are three dimensional and no symmetry plane can be identified. Competition between the upward moving buoyancy driven flows and the downward moving momentum driven flows in the center region of the tank, results in the formation of circulation zones. The moderator tank operates in the buoyancy driven mode and any small disturbances in the flow or temperature makes the system unstable and asymmetric. Different types of temperature fluctuations are noted inside the tank: (i) large amplitude are at the boundaries between the hot and cold; (ii) low amplitude are in the core of the tank; (iii) high frequency fluctuations are in the regions with high velocities and (iv) low frequency fluctuations are in the regions with lower velocities

  20. Three-dimensional Modeling of Type Ia Supernova Explosions

    Science.gov (United States)

    Khokhlov, Alexei

    2001-06-01

    A deflagration explosion of a Type Ia Supernova (SNIa) is studied using three-dimensional, high-resolution, adaptive mesh refinement fluid dynamic calculations. Deflagration speed in an exploding Chandrasekhar-mass carbon-oxygen white dwarf (WD) grows exponentially, reaches approximately 30the speed of sound, and then declines due to a WD expansion. Outermost layers of the WD remain unburned. The explosion energy is comparable to that of a Type Ia supernova. The freezing of turbulent motions by expansion appears to be a crucial physical mechanism regulating the strength of a supernova explosion. In contrast to one-dimensional models, three-dimensional calculations predict the formation of Si-group elements and pockets of unburned CO in the middle and in central regions of a supernova ejecta. This, and the presence of unburned outer layer of carbon-oxygen may pose problems for SNIa spectra. Explosion sensitivity to initial conditions and its relation to a diversity of SNIa is discussed.

  1. Numerical investigation of three-dimensional single-species plasma equilibria on magnetic surfaces

    International Nuclear Information System (INIS)

    Lefrancois, Remi G.; Pedersen, Thomas Sunn; Boozer, Allen H.; Kremer, Jason P.

    2005-01-01

    Presented for the first time are numerical solutions to the three-dimensional nonlinear equilibrium equation for single-species plasmas confined on magnetic surfaces and surrounded by an equipotential boundary. The major-radial shift of such plasmas is found to be outward, qualitatively similar to the Shafranov shift of quasineutral plasmas confined on magnetic surfaces. However, this is the opposite of what occurs in the pure toroidal field equilibria of non-neutral plasmas (i.e., in the absence of magnetic surfaces). The effect of varying the number of Debye lengths in the plasma for the three-dimensional (3D) model is in agreement with previous 2D calculations: the potential varies significantly on magnetic surfaces for plasmas with few Debye lengths (a d ), and tends to be constant on surfaces when many Debye lengths are present (a > or approx. 10λ d ). For the case of a conducting boundary that does not conform to the outer magnetic surface, the plasma is shifted towards the conductor and the potential varies significantly on magnetic surfaces near the plasma edge. Debye shielding effects are clearly demonstrated when a nonuniform bias is applied to the boundary. Computed equilibrium profiles are presented for the Columbia Non-Neutral Torus [T. S. Pedersen, A. H. Boozer, J. P. Kermer, R. Lefrancois, F. Dahlgren, N. Pomphrey, W. Reiersen, and W. Dorland, Fusion Sci. Technol. 46, 200 (2004)], a stellarator designed to confine non-neutral plasmas

  2. A Three-dimensional Topological Model of Ternary Phase Diagram

    International Nuclear Information System (INIS)

    Mu, Yingxue; Bao, Hong

    2017-01-01

    In order to obtain a visualization of the complex internal structure of ternary phase diagram, the paper realized a three-dimensional topology model of ternary phase diagram with the designed data structure and improved algorithm, under the guidance of relevant theories of computer graphics. The purpose of the model is mainly to analyze the relationship between each phase region of a ternary phase diagram. The model not only obtain isothermal section graph at any temperature, but also extract a particular phase region in which users are interested. (paper)

  3. A numerical study of three-dimensional droplets spreading on chemically patterned surfaces

    KAUST Repository

    Zhong, Hua

    2016-09-26

    We study numerically the three-dimensional droplets spreading on physically flat chemically patterned surfaces with periodic squares separated by channels. Our model consists of the Navier-Stokes-Cahn-Hilliard equations with the generalized Navier boundary conditions. Stick-slip behavior and con-tact angle hysteresis are observed. Moreover, we also study the relationship between the effective advancing/receding angle and the two intrinsic angles of the surface patterns. By increasing the volume of droplet gradually, we find that the advancing contact line tends gradually to an equiangular octagon with the length ratio of the two adjacent sides equal to a fixed value that depends on the geometry of the pattern.

  4. Three-dimensional two-fluid numerical treatment of a reactor vessel in TRAC

    International Nuclear Information System (INIS)

    Liles, D.R.

    1979-01-01

    A three-dimensional two-fluid finite difference model has been used in TRAC (Transient Reactor Analysis Code) to represent a pressurized water reactor vessel. Mesh cells may be blocked off completely to represent large flow obstructions such as downcomer walls. The hydrodynamic volumes and flow areas may also be reduced in order to provide a porous matrix simulation of smaller scale strucuture. The finite difference equations are semi-implicit so that stability time scales are associated with material movement and not wave propagation. The block matrix structure is reduced during the implicit pass to a single element seven stripe system which is easily solved iteratively. This procedure has successfully performed numerous simulations of both full sized reactor accidents and smaller scale experments. It has proven to be a useful feature of the TRAC effort

  5. Processing And Display Of Medical Three Dimensional Arrays Of Numerical Data Using Octree Encoding

    Science.gov (United States)

    Amans, Jean-Louis; Darier, Pierre

    1986-05-01

    imaging modalities such as X-Ray computerized Tomography (CT), Nuclear Medecine and Nuclear Magnetic Resonance can produce three-dimensional (3-D) arrays of numerical data of medical object internal structures. The analysis of 3-D data by synthetic generation of realistic images is an important area of computer graphics and imaging.

  6. Numerical simulation of the control of the three-dimensional transition process in boundary layers

    Science.gov (United States)

    Kral, L. D.; Fasel, H. F.

    1990-01-01

    Surface heating techniques to control the three-dimensional laminar-turbulent transition process are numerically investigated for a water boundary layer. The Navier-Stokes and energy equations are solved using a fully implicit finite difference/spectral method. The spatially evolving boundary layer is simulated. Results of both passive and active methods of control are shown for small amplitude two-dimensional and three-dimensional disturbance waves. Control is also applied to the early stages of the secondary instability process using passive or active control techniques.

  7. Recurrence relations in the three-dimensional Ising model

    International Nuclear Information System (INIS)

    Yukhnovskij, I.R.; Kozlovskij, M.P.

    1977-01-01

    Recurrence relations between the coefficients asub(2)sup((i)), asub(4)sup((i)) and Psub(2)sup((i)), Psub(4)sup((i)) which characterize the probabilities of distribution for the three-dimensional Ising model are studied. It is shown that for large arguments z of the Makdonald functions Ksub(ν)(z) the recurrence relations correspond to the known Wilson relations. But near the critical point for small values of the transfer momentum k this limit case does not take place. In the pointed region the argument z tends to zero, and new recurrence relations take place

  8. Three-dimensional numerical simulation of wave interaction with perforated quasi-ellipse caisson

    Directory of Open Access Journals (Sweden)

    Yong-xue Wang

    2011-03-01

    Full Text Available The finite difference method and the volume of fluid (VOF method were used to develop a three-dimensional numerical model to study wave interaction with a perforated caisson. The partial cell method was adopted to solve this type of problem for the first time. The validity of the present model, with and without the presence of caisson structures, was examined by comparing the model results with experimental data. Then, the numerical model was used to investigate the effects of various wave and structure parameters on the wave force and wave runup of the perforated quasi-ellipse caisson. Compared with the solid quasi-ellipse caisson, the wave force on the perforated quasi-ellipse caisson is significantly reduced with increasing porosity of the perforated quasi-ellipse caisson. Furthermore, the perforated quasi-ellipse caisson can also reduce the wave runup, and it tends to decrease with the increase of the porosity of the perforated quasi-ellipse caisson and the relative wave height.

  9. Residual estuarine circulation in the Mandovi, a monsoonal estuary: A three-dimensional model study

    Digital Repository Service at National Institute of Oceanography (India)

    Vijith, V.; Shetye, S.R.; Baetens, K.; Luyten, P.; Michael, G.S.

    -dependence is forced by the Indian Summer Monsoon (ISM) and hence the estuary is referred to as a monsoonal estuary. In this paper, we use a three-dimensional, open source, hydrodynamic, numerical model to reproduce the observed annual salinity field in the Mandovi. We...

  10. Three-dimensional conceptual model for the Hanford Site unconfined aquifer system, FY 1993 status report

    International Nuclear Information System (INIS)

    Thorne, P.D.; Chamness, M.A.; Spane, F.A. Jr.; Vermeul, V.R.; Webber, W.D.

    1993-12-01

    The ground water underlying parts of the Hanford Site (Figure 1.1) contains radioactive and chemical contaminants at concentrations exceeding regulatory standards (Dresel et al. 1993). The Hanford Site Ground-Water Surveillance Project, operated by Pacific Northwest Laboratory (PNL), is responsible for monitoring the movement of these contaminants to ensure that public health and the environment are protected. To support the monitoring effort, a sitewide three-dimensional ground-water flow model is being developed. This report provides an update on the status of the conceptual model that will form the basis for constructing a numerical three-dimensional flow model for, the site. Thorne and Chamness (1992) provide additional information on the initial development of the three-dimensional conceptual model

  11. Three-dimensional modeler for animated images display system

    International Nuclear Information System (INIS)

    Boubekeur, Rania

    1987-01-01

    The mv3d software allows the modeling and display of three dimensional objects in interpretative mode with animation possibility in real time. This system is intended for a graphical extension of a FORTH interpreter (implemented by CEA/IRDI/D.LETI/DEIN) in order to control a specific hardware (3.D card designed and implemented by DEIN) allowing the generation of three dimensional objects. The object description is carried out with a specific graphical language integrated in the FORTH interpreter. Objects are modeled using elementary solids called basic forms (cube, cone, cylinder...) assembled with classical geometric transformations (rotation, translation and scaling). These basic forms are approximated by plane polygonal facets further divided in triangles. Coordinates of the summits of triangles constitute the geometrical data. These are sent to the 3.D. card for processing and display. Performed processing are: geometrical transformations on display, hidden surface elimination, shading and clipping. The mv3d software is not an entire modeler but a simple, modular and extensible tool, to which other specific functions may be easily added such as: robots motion, collisions... (author) [fr

  12. A three-dimensional viscous topography mesoscale model

    Energy Technology Data Exchange (ETDEWEB)

    Eichhorn, J; Flender, M; Kandlbinder, T; Panhans, W G; Trautmann, T; Zdunkowski, W G [Mainz Univ. (Germany). Inst. fuer Physik der Atmosphaere; Cui, K; Ries, R; Siebert, J; Wedi, N

    1997-11-01

    This study describes the theoretical foundation and applications of a newly designed mesoscale model named CLIMM (climate model Mainz). In contrast to terrain following coordinates, a cartesian grid is used to keep the finite difference equations as simple as possible. The method of viscous topography is applied to the flow part of the model. Since the topography intersects the cartesian grid cells, the new concept of boundary weight factors is introduced for the solution of Poisson`s equation. A three-dimensional radiosity model was implemented to handle radiative transfer at the ground. The model is applied to study thermally induced circulations and gravity waves at an idealized mountain. Furthermore, CLIMM was used to simulate typical wind and temperature distributions for the city of Mainz and its rural surroundings. It was found that the model in all cases produced realistic results. (orig.) 38 refs.

  13. Three-dimensional modeling of nuclear steam generator

    International Nuclear Information System (INIS)

    Bogdan, Z.; Afgan, N.

    1985-01-01

    In this paper mathematical model for steady-state simulation of thermodynamic and hydraulic behaviour of U-tube nuclear steam generator is described. The model predicts three-dimensional distribution of temperatures, pressures, steam qualities and velocities in the steam generator secondary loop. In this analysis homogeneous two phase flow model is utilized. Foe purpose of the computer implementation of the mathematical model, a special flow distribution code NUGEN was developed. Calculations are performed with the input data and geometrical characteristics related to the D-4 (westinghouse) model of U-tube nuclear steam generator built in Krsko, operating under 100% load conditions. Results are shown in diagrams giving spatial distribution of pertinent variables in the secondary loop. (author)

  14. Development of a three dimensional circulation model based on fractional step method

    Directory of Open Access Journals (Sweden)

    Mazen Abualtayef

    2010-03-01

    Full Text Available A numerical model was developed for simulating a three-dimensional multilayer hydrodynamic and thermodynamic model in domains with irregular bottom topography. The model was designed for examining the interactions between flow and topography. The model was based on the three-dimensional Navier-Stokes equations and was solved using the fractional step method, which combines the finite difference method in the horizontal plane and the finite element method in the vertical plane. The numerical techniques were described and the model test and application were presented. For the model application to the northern part of Ariake Sea, the hydrodynamic and thermodynamic results were predicted. The numerically predicted amplitudes and phase angles were well consistent with the field observations.

  15. Bioprinted three dimensional human tissues for toxicology and disease modeling.

    Science.gov (United States)

    Nguyen, Deborah G; Pentoney, Stephen L

    2017-03-01

    The high rate of attrition among clinical-stage therapies, due largely to an inability to predict human toxicity and/or efficacy, underscores the need for in vitro models that better recapitulate in vivo human biology. In much the same way that additive manufacturing has revolutionized the production of solid objects, three-dimensional (3D) bioprinting is enabling the automated production of more architecturally and functionally accurate in vitro tissue culture models. Here, we provide an overview of the most commonly used bioprinting approaches and how they are being used to generate complex in vitro tissues for use in toxicology and disease modeling research. Copyright © 2017 Elsevier Ltd. All rights reserved.

  16. ANS main control complex three-dimensional computer model development

    International Nuclear Information System (INIS)

    Cleaves, J.E.; Fletcher, W.M.

    1993-01-01

    A three-dimensional (3-D) computer model of the Advanced Neutron Source (ANS) main control complex is being developed. The main control complex includes the main control room, the technical support center, the materials irradiation control room, computer equipment rooms, communications equipment rooms, cable-spreading rooms, and some support offices and breakroom facilities. The model will be used to provide facility designers and operations personnel with capabilities for fit-up/interference analysis, visual ''walk-throughs'' for optimizing maintain-ability, and human factors and operability analyses. It will be used to determine performance design characteristics, to generate construction drawings, and to integrate control room layout, equipment mounting, grounding equipment, electrical cabling, and utility services into ANS building designs. This paper describes the development of the initial phase of the 3-D computer model for the ANS main control complex and plans for its development and use

  17. A three-dimensional model of a gap junction

    International Nuclear Information System (INIS)

    Xylouris, K.; Wittum, G.

    2009-01-01

    Gap junctions are effective electric couplings between neurons and form a very important way of communication between them. Since they can be considered as the points on the neuron's membrane on which for example dendrites of different cells become one piece, in three dimensions they can be modelled by observing this property in the created geometry. Thus they can be easily made part in an already existing 3-dimensional model for signal propagation on the neuron's membrane, if the geometries are chosen in such a way respect the blending of the membranes. A small network of two cells was created, which blend in their dendrites and a simulation of the three-dimensional model was carried out which reveals the fast transmission of the signal from one cell to the other.

  18. Three-dimensional temporomandibular joint modeling and animation.

    Science.gov (United States)

    Cascone, Piero; Rinaldi, Fabrizio; Pagnoni, Mario; Marianetti, Tito Matteo; Tedaldi, Massimiliano

    2008-11-01

    The three-dimensional (3D) temporomandibular joint (TMJ) model derives from a study of the cranium by 3D virtual reality and mandibular function animation. The starting point of the project is high-fidelity digital acquisition of a human dry skull. The cooperation between the maxillofacial surgeon and the cartoonist enables the reconstruction of the fibroconnective components of the TMJ that are the keystone for comprehension of the anatomic and functional features of the mandible. The skeletal model is customized with the apposition of the temporomandibular ligament, the articular disk, the retrodiskal tissue, and the medial and the lateral ligament of the disk. The simulation of TMJ movement is the result of the integration of up-to-date data on the biomechanical restrictions. The 3D TMJ model is an easy-to-use application that may be run on a personal computer for the study of the TMJ and its biomechanics.

  19. Phase Diagrams of Three-Dimensional Anderson and Quantum Percolation Models Using Deep Three-Dimensional Convolutional Neural Network

    Science.gov (United States)

    Mano, Tomohiro; Ohtsuki, Tomi

    2017-11-01

    The three-dimensional Anderson model is a well-studied model of disordered electron systems that shows the delocalization-localization transition. As in our previous papers on two- and three-dimensional (2D, 3D) quantum phase transitions [J. Phys. Soc. Jpn. 85, 123706 (2016), 86, 044708 (2017)], we used an image recognition algorithm based on a multilayered convolutional neural network. However, in contrast to previous papers in which 2D image recognition was used, we applied 3D image recognition to analyze entire 3D wave functions. We show that a full phase diagram of the disorder-energy plane is obtained once the 3D convolutional neural network has been trained at the band center. We further demonstrate that the full phase diagram for 3D quantum bond and site percolations can be drawn by training the 3D Anderson model at the band center.

  20. Three-dimensional modeling of electron quasiviscous dissipation in guide-field magnetic reconnection

    International Nuclear Information System (INIS)

    Hesse, Michael; Kuznetsova, Masha; Schindler, Karl; Birn, Joachim

    2005-01-01

    A numerical study of guide-field magnetic reconnection in a three-dimensional model is presented. Starting from an initial, perturbed, force-free current sheet, it is shown that reconnection develops to an almost translationally invariant state, where magnetic perturbations are aligned primarily along the main current flow direction. An analysis of guide-field and electron flow signatures indicates behavior that is very similar to earlier, albeit not three-dimensional, simulations. Furthermore, a detailed investigation of electron pressure nongyrotropies in the central diffusion region confirms the major role the associated dissipation process plays in establishing the reconnection electric field

  1. Three-dimensional discrete-time Lotka-Volterra models with an application to industrial clusters

    Science.gov (United States)

    Bischi, G. I.; Tramontana, F.

    2010-10-01

    We consider a three-dimensional discrete dynamical system that describes an application to economics of a generalization of the Lotka-Volterra prey-predator model. The dynamic model proposed is used to describe the interactions among industrial clusters (or districts), following a suggestion given by [23]. After studying some local and global properties and bifurcations in bidimensional Lotka-Volterra maps, by numerical explorations we show how some of them can be extended to their three-dimensional counterparts, even if their analytic and geometric characterization becomes much more difficult and challenging. We also show a global bifurcation of the three-dimensional system that has no two-dimensional analogue. Besides the particular economic application considered, the study of the discrete version of Lotka-Volterra dynamical systems turns out to be a quite rich and interesting topic by itself, i.e. from a purely mathematical point of view.

  2. TRANSMISSION SPECTRA OF THREE-DIMENSIONAL HOT JUPITER MODEL ATMOSPHERES

    International Nuclear Information System (INIS)

    Fortney, J. J.; Shabram, M.; Showman, A. P.; Lian, Y.; Lewis, N. K.; Freedman, R. S.; Marley, M. S.

    2010-01-01

    We compute models of the transmission spectra of planets HD 209458b, HD 189733b, and generic hot Jupiters. We examine the effects of temperature, surface gravity, and metallicity for the generic planets as a guide to understanding transmission spectra in general. We find that carbon dioxide absorption at 4.4 and 15 μm is prominent at high metallicity, and is a clear metallicity indicator. For HD 209458b and HD 189733b, we compute spectra for both one-dimensional and three-dimensional model atmospheres and examine the differences between them. The differences are usually small, but can be large if atmospheric temperatures are near important chemical abundance boundaries. The calculations for the three-dimensional atmospheres, and their comparison with data, serve as constraints on these dynamical models that complement the secondary eclipse and light curve data sets. For HD 209458b, even if TiO and VO gases are abundant on the dayside, their abundances can be considerably reduced on the cooler planetary limb. However, given the predicted limb temperatures and TiO abundances, the model's optical opacity is too high. For HD 189733b we find a good match with some infrared data sets and constrain the altitude of a postulated haze layer. For this planet, substantial differences can exist between the transmission spectra of the leading and trailing hemispheres, which are an excellent probe of carbon chemistry. In thermochemical equilibrium, the cooler leading hemisphere is methane-dominated, and the hotter trailing hemisphere is CO-dominated, but these differences may be eliminated by non-equilibrium chemistry due to vertical mixing. It may be possible to constrain the carbon chemistry of this planet, and its spatial variation, with James Webb Space Telescope.

  3. Three-dimensional lattice Boltzmann model for compressible flows.

    Science.gov (United States)

    Sun, Chenghai; Hsu, Andrew T

    2003-07-01

    A three-dimensional compressible lattice Boltzmann model is formulated on a cubic lattice. A very large particle-velocity set is incorporated in order to enable a greater variation in the mean velocity. Meanwhile, the support set of the equilibrium distribution has only six directions. Therefore, this model can efficiently handle flows over a wide range of Mach numbers and capture shock waves. Due to the simple form of the equilibrium distribution, the fourth-order velocity tensors are not involved in the formulation. Unlike the standard lattice Boltzmann model, no special treatment is required for the homogeneity of fourth-order velocity tensors on square lattices. The Navier-Stokes equations were recovered, using the Chapman-Enskog method from the Bhatnagar-Gross-Krook (BGK) lattice Boltzmann equation. The second-order discretization error of the fluctuation velocity in the macroscopic conservation equation was eliminated by means of a modified collision invariant. The model is suitable for both viscous and inviscid compressible flows with or without shocks. Since the present scheme deals only with the equilibrium distribution that depends only on fluid density, velocity, and internal energy, boundary conditions on curved wall are easily implemented by an extrapolation of macroscopic variables. To verify the scheme for inviscid flows, we have successfully simulated a three-dimensional shock-wave propagation in a box and a normal shock of Mach number 10 over a wedge. As an application to viscous flows, we have simulated a flat plate boundary layer flow, flow over a cylinder, and a transonic flow over a NACA0012 airfoil cascade.

  4. Three-dimensional transition in the wake of a circular cylinder by direct numerical simulation

    International Nuclear Information System (INIS)

    Kang, S. J.; Mo, J. O.; Lee, Y. H.; Tanahashi, M.; Miyauchi, T.

    2001-01-01

    Three-dimensional time-dependent flow past a circular cylinder is numerically investigated using direct numerical simulation for Reynolds number 280 and 300. The higher-order finite difference scheme is employed for the spatial distributions along with the second order Adams-Bashforth and the first order backward-Euler time integration. In x-y plane, the convection term is applied by the 5th order upwind scheme and the pressure and viscosity terms are applied by the 4th order central difference. And in spanwise, Navier-Stokes equation is distributed using of spectral method. At Reynolds number 259 the two-dimensional wake becomes linearly unstable to a second branch of modes with wavelength about 1.0 diameters at onset (B-mode). Present results of three-dimensional effects of in wake of a circular cylinder is represented with spanwise and streamwise vorticity contours as Reynolds numbers

  5. Three-dimensional numerical simulation of natural convection under the influence of magnetic fields

    International Nuclear Information System (INIS)

    Moessner, R.

    1996-04-01

    This report deals with the influence of strong magnetic fields on three-dimensional natural convection. First the dimensionless basic equations are derived in cartesian coordinates. This equations are solved numerically in rectangular domains with a Finite-Difference-Method. The following calculations investigate the flow in an electrically insulated cube which is heated and cooled at side walls. It is possible to perform systematic computations for the variation of the direction of the magnetic field and thermal boundary conditions. (orig.)

  6. Three-dimensional in vitro cancer models: a short review

    International Nuclear Information System (INIS)

    Wang, Chengyang; Sun, Wei; Tang, Zhenyu; Li, Lingsong; Zhao, Yu; Yao, Rui

    2014-01-01

    The re-creation of the tumor microenvironment including tumor–stromal interactions, cell–cell adhesion and cellular signaling is essential in cancer-related studies. Traditional two-dimensional (2D) cell culture and animal models have been proven to be valid in some areas of explaining cancerous cell behavior and interpreting hypotheses of possible mechanisms. However, a well-defined three-dimensional (3D) in vitro cancer model, which mimics tumor structures found in vivo and allows cell–cell and cell–matrix interactions, has gained strong interest for a wide variety of diagnostic and therapeutic applications. This communication attempts to provide a representative overview of applying 3D in vitro biological model systems for cancer related studies. The review compares and comments on the differences in using 2D models, animal models and 3D in vitro models for cancer research. Recent technologies to construct and develop 3D in vitro cancer models are summarized in aspects of modeling design, fabrication technique and potential application to biology, pathogenesis study and drug testing. With the help of advanced engineering techniques, the development of a novel complex 3D in vitro cancer model system will provide a better opportunity to understand crucial cancer mechanisms and to develop new clinical therapies. (topical review)

  7. A THREE-DIMENSIONAL BABCOCK-LEIGHTON SOLAR DYNAMO MODEL

    International Nuclear Information System (INIS)

    Miesch, Mark S.; Dikpati, Mausumi

    2014-01-01

    We present a three-dimensional (3D) kinematic solar dynamo model in which poloidal field is generated by the emergence and dispersal of tilted sunspot pairs (more generally bipolar magnetic regions, or BMRs). The axisymmetric component of this model functions similarly to previous 2.5 dimensional (2.5D, axisymmetric) Babcock-Leighton (BL) dynamo models that employ a double-ring prescription for poloidal field generation but we generalize this prescription into a 3D flux emergence algorithm that places BMRs on the surface in response to the dynamo-generated toroidal field. In this way, the model can be regarded as a unification of BL dynamo models (2.5D in radius/latitude) and surface flux transport models (2.5D in latitude/longitude) into a more self-consistent framework that builds on the successes of each while capturing the full 3D structure of the evolving magnetic field. The model reproduces some basic features of the solar cycle including an 11 yr periodicity, equatorward migration of toroidal flux in the deep convection zone, and poleward propagation of poloidal flux at the surface. The poleward-propagating surface flux originates as trailing flux in BMRs, migrates poleward in multiple non-axisymmetric streams (made axisymmetric by differential rotation and turbulent diffusion), and eventually reverses the polar field, thus sustaining the dynamo. In this Letter we briefly describe the model, initial results, and future plans

  8. Three-dimensional decomposition models for carbon productivity

    International Nuclear Information System (INIS)

    Meng, Ming; Niu, Dongxiao

    2012-01-01

    This paper presents decomposition models for the change in carbon productivity, which is considered a key indicator that reflects the contributions to the control of greenhouse gases. Carbon productivity differential was used to indicate the beginning of decomposition. After integrating the differential equation and designing the Log Mean Divisia Index equations, a three-dimensional absolute decomposition model for carbon productivity was derived. Using this model, the absolute change of carbon productivity was decomposed into a summation of the absolute quantitative influences of each industrial sector, for each influence factor (technological innovation and industrial structure adjustment) in each year. Furthermore, the relative decomposition model was built using a similar process. Finally, these models were applied to demonstrate the decomposition process in China. The decomposition results reveal several important conclusions: (a) technological innovation plays a far more important role than industrial structure adjustment; (b) industry and export trade exhibit great influence; (c) assigning the responsibility for CO 2 emission control to local governments, optimizing the structure of exports, and eliminating backward industrial capacity are highly essential to further increase China's carbon productivity. -- Highlights: ► Using the change of carbon productivity to measure a country's contribution. ► Absolute and relative decomposition models for carbon productivity are built. ► The change is decomposed to the quantitative influence of three-dimension. ► Decomposition results can be used for improving a country's carbon productivity.

  9. Three-dimensional models of metal-poor stars

    International Nuclear Information System (INIS)

    Collet, R

    2008-01-01

    I present here the main results of recent realistic, three-dimensional (3D), hydrodynamical simulations of convection at the surface of metal-poor red giant stars. I discuss the application of these convection simulations as time-dependent, 3D, hydrodynamical model atmospheres to spectral line formation calculations and abundance analyses. The impact of 3D models on derived elemental abundances is investigated by means of a differential comparison of the line strengths predicted in 3D under the assumption of local thermodynamic equilibrium (LTE) with the results of analogous line formation calculations performed with classical, 1D, hydrostatic model atmospheres. The low surface temperatures encountered in the upper photospheric layers of 3D model atmospheres of very metal-poor stars cause spectral lines of neutral metals and molecules to appear stronger in 3D than in 1D calculations. Hence, 3D elemental abundances derived from such lines are significantly lower than estimated by analyses with 1D models. In particular, differential 3D-1D LTE abundances for C, N and O derived from CH, NH and OH lines are found to be in the range -0.5 to - 1 dex. Large negative differential 3D-1D corrections to the Fe abundance are also computed for weak low-excitation Fe i lines. The application of metal-poor 3D models to the spectroscopic analysis of extremely iron-poor halo stars is discussed.

  10. Numerical method for solving the three-dimensional time-dependent neutron diffusion equation

    International Nuclear Information System (INIS)

    Khaled, S.M.; Szatmary, Z.

    2005-01-01

    A numerical time-implicit method has been developed for solving the coupled three-dimensional time-dependent multi-group neutron diffusion and delayed neutron precursor equations. The numerical stability of the implicit computation scheme and the convergence of the iterative associated processes have been evaluated. The computational scheme requires the solution of large linear systems at each time step. For this purpose, the point over-relaxation Gauss-Seidel method was chosen. A new scheme was introduced instead of the usual source iteration scheme. (author)

  11. Three dimensional modelling for the target asteroid of HAYABUSA

    Science.gov (United States)

    Demura, H.; Kobayashi, S.; Asada, N.; Hashimoto, T.; Saito, J.

    Hayabusa program is the first sample return mission of Japan. This was launched at May 9 2003, and will arrive at the target asteroid 25143 Itokawa on June 2005. The spacecraft has three optical navigation cameras, which are two wide angle ones and a telescopic one. The telescope with a filter wheel was named AMICA (Asteroid Multiband Imaging CAmera). We are going to model a shape of the target asteroid by this telescope; expected resolution: 1m/pixel at 10 km in distanc, field of view: 5.7 squared degrees, MPP-type CCD with 1024 x 1000 pixels. Because size of the Hayabusa is about 1x1x1 m, our goal is shape modeling with about 1m in precision on the basis of a camera system with scanning by rotation of the asteroid. This image-based modeling requires sequential images via AMICA and a history of distance between the asteroid and Hayabusa provided by a Laser Range Finder. We established a system of hierarchically recursive search with sub-pixel matching of Ground Control Points, which are picked up with Susan Operator. The matched dataset is restored with a restriction of epipolar geometry, and the obtained a group of three dimensional points are converted to a polygon model with Delaunay Triangulation. The current status of our development for the shape modeling is displayed.

  12. A three-dimensional computational model of collagen network mechanics.

    Directory of Open Access Journals (Sweden)

    Byoungkoo Lee

    Full Text Available Extracellular matrix (ECM strongly influences cellular behaviors, including cell proliferation, adhesion, and particularly migration. In cancer, the rigidity of the stromal collagen environment is thought to control tumor aggressiveness, and collagen alignment has been linked to tumor cell invasion. While the mechanical properties of collagen at both the single fiber scale and the bulk gel scale are quite well studied, how the fiber network responds to local stress or deformation, both structurally and mechanically, is poorly understood. This intermediate scale knowledge is important to understanding cell-ECM interactions and is the focus of this study. We have developed a three-dimensional elastic collagen fiber network model (bead-and-spring model and studied fiber network behaviors for various biophysical conditions: collagen density, crosslinker strength, crosslinker density, and fiber orientation (random vs. prealigned. We found the best-fit crosslinker parameter values using shear simulation tests in a small strain region. Using this calibrated collagen model, we simulated both shear and tensile tests in a large linear strain region for different network geometry conditions. The results suggest that network geometry is a key determinant of the mechanical properties of the fiber network. We further demonstrated how the fiber network structure and mechanics evolves with a local formation, mimicking the effect of pulling by a pseudopod during cell migration. Our computational fiber network model is a step toward a full biomechanical model of cellular behaviors in various ECM conditions.

  13. Development of an interactive anatomical three-dimensional eye model.

    Science.gov (United States)

    Allen, Lauren K; Bhattacharyya, Siddhartha; Wilson, Timothy D

    2015-01-01

    The discrete anatomy of the eye's intricate oculomotor system is conceptually difficult for novice students to grasp. This is problematic given that this group of muscles represents one of the most common sites of clinical intervention in the treatment of ocular motility disorders and other eye disorders. This project was designed to develop a digital, interactive, three-dimensional (3D) model of the muscles and cranial nerves of the oculomotor system. Development of the 3D model utilized data from the Visible Human Project (VHP) dataset that was refined using multiple forms of 3D software. The model was then paired with a virtual user interface in order to create a novel 3D learning tool for the human oculomotor system. Development of the virtual eye model was done while attempting to adhere to the principles of cognitive load theory (CLT) and the reduction of extraneous load in particular. The detailed approach, digital tools employed, and the CLT guidelines are described herein. © 2014 American Association of Anatomists.

  14. Advanced numerical methods for three dimensional two-phase flow calculations in PWR

    International Nuclear Information System (INIS)

    Toumi, I.; Gallo, D.; Royer, E.

    1997-01-01

    This paper is devoted to new numerical methods developed for three dimensional two-phase flow calculations. These methods are finite volume numerical methods. They are based on an extension of Roe's approximate Riemann solver to define convective fluxes versus mean cell quantities. To go forward in time, a linearized conservative implicit integrating step is used, together with a Newton iterative method. We also present here some improvements performed to obtain a fully implicit solution method that provides fast running steady state calculations. This kind of numerical method, which is widely used for fluid dynamic calculations, is proved to be very efficient for the numerical solution to two-phase flow problems. This numerical method has been implemented for the three dimensional thermal-hydraulic code FLICA-4 which is mainly dedicated to core thermal-hydraulic transient and steady-state analysis. Hereafter, we will also find some results obtained for the EPR reactor running in a steady-state at 60% of nominal power with 3 pumps out of 4, and a thermal-hydraulic core analysis for a 1300 MW PWR at low flow steam-line-break conditions. (author)

  15. Three-dimensional transient electromagnetic modeling in the Laplace Domain

    International Nuclear Information System (INIS)

    Mizunaga, H.; Lee, Ki Ha; Kim, H.J.

    1998-01-01

    In modeling electromagnetic responses, Maxwell's equations in the frequency domain are popular and have been widely used (Nabighian, 1994; Newman and Alumbaugh, 1995; Smith, 1996, to list a few). Recently, electromagnetic modeling in the time domain using the finite difference (FDTD) method (Wang and Hohmann, 1993) has also been used to study transient electromagnetic interactions in the conductive medium. This paper presents a new technique to compute the electromagnetic response of three-dimensional (3-D) structures. The proposed new method is based on transforming Maxwell's equations to the Laplace domain. For each discrete Laplace variable, Maxwell's equations are discretized in 3-D using the staggered grid and the finite difference method (FDM). The resulting system of equations is then solved for the fields using the incomplete Cholesky conjugate gradient (ICCG) method. The new method is particularly effective in saving computer memory since all the operations are carried out in real numbers. For the same reason, the computing speed is faster than frequency domain modeling. The proposed approach can be an extremely useful tool in developing an inversion algorithm using the time domain data

  16. [Preparation of simulate craniocerebral models via three dimensional printing technique].

    Science.gov (United States)

    Lan, Q; Chen, A L; Zhang, T; Zhu, Q; Xu, T

    2016-08-09

    Three dimensional (3D) printing technique was used to prepare the simulate craniocerebral models, which were applied to preoperative planning and surgical simulation. The image data was collected from PACS system. Image data of skull bone, brain tissue and tumors, cerebral arteries and aneurysms, and functional regions and relative neural tracts of the brain were extracted from thin slice scan (slice thickness 0.5 mm) of computed tomography (CT), magnetic resonance imaging (MRI, slice thickness 1mm), computed tomography angiography (CTA), and functional magnetic resonance imaging (fMRI) data, respectively. MIMICS software was applied to reconstruct colored virtual models by identifying and differentiating tissues according to their gray scales. Then the colored virtual models were submitted to 3D printer which produced life-sized craniocerebral models for surgical planning and surgical simulation. 3D printing craniocerebral models allowed neurosurgeons to perform complex procedures in specific clinical cases though detailed surgical planning. It offered great convenience for evaluating the size of spatial fissure of sellar region before surgery, which helped to optimize surgical approach planning. These 3D models also provided detailed information about the location of aneurysms and their parent arteries, which helped surgeons to choose appropriate aneurismal clips, as well as perform surgical simulation. The models further gave clear indications of depth and extent of tumors and their relationship to eloquent cortical areas and adjacent neural tracts, which were able to avoid surgical damaging of important neural structures. As a novel and promising technique, the application of 3D printing craniocerebral models could improve the surgical planning by converting virtual visualization into real life-sized models.It also contributes to functional anatomy study.

  17. ALGE3D: A Three-Dimensional Transport Model

    Science.gov (United States)

    Maze, G. M.

    2017-12-01

    Of the top 10 most populated US cities from a 2015 US Census Bureau estimate, 7 of the cities are situated near the ocean, a bay, or on one of the Great Lakes. A contamination of the water ways in the United States could be devastating to the economy (through tourism and industries such as fishing), public health (from direct contact, or contaminated drinking water), and in some cases even infrastructure (water treatment plants). Current national response models employed by emergency response agencies have well developed models to simulate the effects of hazardous contaminants in riverine systems that are primarily driven by one-dimensional flows; however in more complex systems, such as tidal estuaries, bays, or lakes, a more complex model is needed. While many models exist, none are capable of quick deployment in emergency situations that could contain a variety of release situations including a mixture of both particulate and dissolved chemicals in a complex flow area. ALGE3D, developed at the Department of Energy's (DOE) Savannah River National Laboratory (SRNL), is a three-dimensional hydrodynamic code which solves the momentum, mass, and energy conservation equations to predict the movement and dissipation of thermal or dissolved chemical plumes discharged into cooling lakes, rivers, and estuaries. ALGE3D is capable of modeling very complex flows, including areas with tidal flows which include wetting and drying of land. Recent upgrades have increased the capabilities including the transport of particulate tracers, allowing for more complete modeling of the transport of pollutants. In addition the model is capable of coupling with a one-dimension riverine transport model or a two-dimension atmospheric deposition model in the event that a contamination event occurs upstream or upwind of the water body.

  18. Direct numerical simulation of steady state, three dimensional, laminar flow around a wall mounted cube

    Science.gov (United States)

    Liakos, Anastasios; Malamataris, Nikolaos

    2014-11-01

    The topology and evolution of flow around a surface mounted cubical object in three dimensional channel flow is examined for low to moderate Reynolds numbers. Direct numerical simulations were performed via a home made parallel finite element code. The computational domain has been designed according to actual laboratory experimental conditions. Analysis of the results is performed using the three dimensional theory of separation. Our findings indicate that a tornado-like vortex by the side of the cube is present for all Reynolds numbers for which flow was simulated. A horse-shoe vortex upstream from the cube was formed at Reynolds number approximately 1266. Pressure distributions are shown along with three dimensional images of the tornado-like vortex and the horseshoe vortex at selected Reynolds numbers. Finally, and in accordance to previous work, our results indicate that the upper limit for the Reynolds number for which steady state results are physically realizable is roughly 2000. Financial support of author NM from the Office of Naval Research Global (ONRG-VSP, N62909-13-1-V016) is acknowledged.

  19. A Three-Dimensional Model of the Yeast Genome

    Science.gov (United States)

    Noble, William; Duan, Zhi-Jun; Andronescu, Mirela; Schutz, Kevin; McIlwain, Sean; Kim, Yoo Jung; Lee, Choli; Shendure, Jay; Fields, Stanley; Blau, C. Anthony

    Layered on top of information conveyed by DNA sequence and chromatin are higher order structures that encompass portions of chromosomes, entire chromosomes, and even whole genomes. Interphase chromosomes are not positioned randomly within the nucleus, but instead adopt preferred conformations. Disparate DNA elements co-localize into functionally defined aggregates or factories for transcription and DNA replication. In budding yeast, Drosophila and many other eukaryotes, chromosomes adopt a Rabl configuration, with arms extending from centromeres adjacent to the spindle pole body to telomeres that abut the nuclear envelope. Nonetheless, the topologies and spatial relationships of chromosomes remain poorly understood. Here we developed a method to globally capture intra- and inter-chromosomal interactions, and applied it to generate a map at kilobase resolution of the haploid genome of Saccharomyces cerevisiae. The map recapitulates known features of genome organization, thereby validating the method, and identifies new features. Extensive regional and higher order folding of individual chromosomes is observed. Chromosome XII exhibits a striking conformation that implicates the nucleolus as a formidable barrier to interaction between DNA sequences at either end. Inter-chromosomal contacts are anchored by centromeres and include interactions among transfer RNA genes, among origins of early DNA replication and among sites where chromosomal breakpoints occur. Finally, we constructed a three-dimensional model of the yeast genome. Our findings provide a glimpse of the interface between the form and function of a eukaryotic genome.

  20. Three-Dimensional Numerical Analysis of Compound Lining in Complex Underground Surge-Shaft Structure

    Directory of Open Access Journals (Sweden)

    Juntao Chen

    2015-01-01

    Full Text Available The mechanical behavior of lining structure of deep-embedded cylinder surge shaft with multifork tunnel is analyzed using three-dimensional nonlinear FEM. With the elastic-plastic constitutive relations of rock mass imported and the implicit bolt element and distributed concrete cracking model adopted, a computing method of complex surge shaft is presented for the simulation of underground excavations and concrete lining cracks. In order to reflect the interaction and initial gap between rock mass and concrete lining, a three-dimensional nonlinear interface element is adopted, which can take into account both the normal and tangential characteristics. By an actual engineering computation, the distortion characteristics and stress distribution rules of the dimensional multifork surge-shaft lining structure under different behavior are revealed. The results verify the rationality and feasibility of this computation model and method and provide a new idea and reference for the complex surge-shaft design and construction.

  1. Ground-water solute transport modeling using a three-dimensional scaled model

    International Nuclear Information System (INIS)

    Crider, S.S.

    1987-01-01

    Scaled models are used extensively in current hydraulic research on sediment transport and solute dispersion in free surface flows (rivers, estuaries), but are neglected in current ground-water model research. Thus, an investigation was conducted to test the efficacy of a three-dimensional scaled model of solute transport in ground water. No previous results from such a model have been reported. Experiments performed on uniform scaled models indicated that some historical problems (e.g., construction and scaling difficulties; disproportionate capillary rise in model) were partly overcome by using simple model materials (sand, cement and water), by restricting model application to selective classes of problems, and by physically controlling the effect of the model capillary zone. Results from these tests were compared with mathematical models. Model scaling laws were derived for ground-water solute transport and used to build a three-dimensional scaled model of a ground-water tritium plume in a prototype aquifer on the Savannah River Plant near Aiken, South Carolina. Model results compared favorably with field data and with a numerical model. Scaled models are recommended as a useful additional tool for prediction of ground-water solute transport

  2. New numerical solutions of three-dimensional compressible hydrodynamic convection. [in stars

    Science.gov (United States)

    Hossain, Murshed; Mullan, D. J.

    1990-01-01

    Numerical solutions of three-dimensional compressible hydrodynamics (including sound waves) in a stratified medium with open boundaries are presented. Convergent/divergent points play a controlling role in the flows, which are dominated by a single frequency related to the mean sound crossing time. Superposed on these rapid compressive flows, slower eddy-like flows eventually create convective transport. The solutions contain small structures stacked on top of larger ones, with vertical scales equal to the local pressure scale heights, H sub p. Although convective transport starts later in the evolution, vertical scales of H sub p are apparently selected at much earlier times by nonlinear compressive effects.

  3. Comparison of one-, two-, and three-dimensional models for mass transport of radionuclides

    International Nuclear Information System (INIS)

    Prickett, T.A.; Voorhees, M.L.; Herzog, B.L.

    1980-02-01

    This technical memorandum compares one-, two-, and three-dimensional models for studying regional mass transport of radionuclides in groundwater associated with deep repository disposal of high-level radioactive wastes. In addition, this report outlines the general conditions for which a one- or two-dimensional model could be used as an alternate to a three-dimensional model analysis. The investigation includes a review of analytical and numerical models in addition to consideration of such conditions as rock and fluid heterogeneity, anisotropy, boundary and initial conditions, and various geometric shapes of repository sources and sinks. Based upon current hydrologic practice, each review is taken separately and discussed to the extent that the researcher can match his problem conditions with the minimum number of model dimensions necessary for an accurate solution

  4. Numerical simulation of three-dimensional unsteady flow in a scroll expander applied in waste heat recovery

    International Nuclear Information System (INIS)

    Song, P P; Wei, M S; Shi, L; Ma, C C

    2013-01-01

    Three-dimensional numerical simulations of a scroll expander were performed with dynamic mesh technology. R245fa was selected as the working fluid in the simulations. The PISO algorithm was applied to solve the governing equations with RNG k-ε turbulent model. The distribution and variation of three-dimensional flow field inside the scroll expander were obtained. The research indicates that the flow field is nonuniform and asymmetrical distributions exist inside the expander. Vortex flows also exist in some working chambers. Dynamic clearance leakage flows and inlet orifice throttling have great effects on the flow field distribution. Transient output torque and the mass flux have periodic fluctuations during the working cycles

  5. A Synthesizable VHDL Model of the Exact Solution for Three-dimensional Hyperbolic Positioning System

    Directory of Open Access Journals (Sweden)

    Ralph Bucher

    2002-01-01

    Full Text Available This paper presents a synthesizable VHDL model of a three-dimensional hyperbolic positioning system algorithm. The algorithm obtains an exact solution for the three-dimensional location of a mobile given the locations of four fixed stations (like a global positioning system [GPS] satellite or a base station in a cell and the signal time of arrival (TOA from the mobile to each station. The detailed derivation of the steps required in the algorithm is presented. A VHDL model of the algorithm was implemented and simulated using the IEEE numeric_std package. Signals were described by a 32-bit vector. Simulation results predict location of the mobile is off by 1 m for best case and off by 36 m for worst case. A C + + program using real numbers was used as a benchmark for the accuracy and precision of the VHDL model. The model can be easily synthesized for low power hardware implementation.

  6. A three-dimensional model for solar prominences

    International Nuclear Information System (INIS)

    Demoulin, P.; Priest, E.R.; Anzer, U.

    1989-01-01

    Prominences have been modelled largely as one-or two-dimensional structures, and yet observations show them to possess important variations in the third dimension along the prominence axis with great arches with feet reaching down towards the solar surface. As an initial attempt to understand this structure we consider a three-dimensional linear force-free field model for the global magnetic field around a quiescent prominence. It consists of a fundamental together with a harmonic that is periodic along the prominence. At the solar surface there is a series of flux concentrations spaced out periodically on both sides of the prominence. Between a pair of oppositely directed flux concentration, the magnetic field in the prominence is stronger and tends to be less highly sheared than elsewhere. This modulation of the field strength and shear angle along the prominence decreases with height and almost disappears above 10 Mm. Prominence fields that increase with height occur when the shear is large and the length-scale for field variations perpendicular to the prominence exceeds that along it. The variation of the prominence height along the prominence is calculated and it is suggested that feet occur where the prominence sags down to low heights. For prominences of Normal polarity this tends to occur near supergranule centres where the transverse field is least, whereas for those of Inverse polarity it usually takes place near the chromospheric network where the transverse field is greatest. The effect of concentrating the base flux by including extra harmonics is also included. For Normal polarity prominences it tends to make the foot wider, and for Inverse polarity configurations, it usually creates deeper and narrower feet

  7. Three-dimensional numerical simulation of the 20 June 1991, Orlando microburst

    Science.gov (United States)

    Proctor, Fred H.

    1992-01-01

    On 20 June 1991, NASA's Boeing 737, equipped with in-situ and look-ahead wind-shear detection systems, made direct low-level penetrations (300-350 m AGL) through a microburst during several stages of its evolution. This microburst was located roughly 20 km northeast of Orlando International Airport and was monitored by a Terminal Doppler Weather Radar (TDWR) located about 10 km south of the airport. The first NASA encounter with this microburst (Event 142), at approximately 2041 UTC, was during its intensification phase. At flight level, in-situ measurements indicated a peak 1-km (averaged) F-factor of approximately 0.1. The second NASA encounter (Event 143) occurred at approximately 2046 UTC, about the time of microburst peak intensity. It was during this penetration that a peak 1-km F-factor of approximately 17 was encountered, which was the largest in-situ measurement of the 1991 summer deployment. By the third encounter (Event 144), at approximately 2051 UTC, the microburst had expanded into a macroburst. During this phase of evolution, an in-situ 1-km F-factor of 0.08 was measured. The focus of this paper is to examine this microburst via numerical simulation from an unsteady, three-dimensional meteorological cloud model. The simulated high-resolution data fields of wind, temperature, radar reflectivity factor, and precipitation are closely examined so as to derive information not readily available from 'observations' and to enhance our understanding of the actual event. Characteristics of the simulated microburst evolution are compared with TDWR and in-situ measurements.

  8. Three-dimensional numerical study of heat transfer enhancement in separated flows

    Science.gov (United States)

    Kumar, Saurav; Vengadesan, S.

    2017-11-01

    The flow separation appears in a wide range of heat transfer applications and causes poor heat transfer performance. It motivates the study of heat transfer enhancement in laminar as well as turbulent flows over a backward facing step by means of an adiabatic fin mounted on the top wall. Recently, we have studied steady, 2-D numerical simulations in laminar flow and investigated the effect of fin length, location, and orientation. It revealed that the addition of fin causes enhancement of heat transfer and it is very effective to control the flow and thermal behavior. The fin is most effective and sensitive when it is placed exactly above the step. A slight displacement of the fin in upstream of the step causes the complete change of flow and thermal behavior. Based on the obtained 2-D results it is interesting to investigate the side wall effect in three-dimensional simulations. The comparison of two-dimensional and three-dimensional numerical simulations with the available experimental results will be presented. Special attention has to be given to capture unsteadiness in the flow and thermal field.

  9. Three-dimensional hydrogeologic framework model for use with a steady-state numerical ground-water flow model of the Death Valley regional flow system, Nevada and California

    International Nuclear Information System (INIS)

    Belcher, W.R.; Faunt, C.C.; D'Agnese, F.A.

    2002-01-01

    The U.S. Geological Survey, in cooperation with the Department of Energy and other Federal, State, and local agencies, is evaluating the hydrogeologic characteristics of the Death Valley regional ground-water flow system. The ground-water flow system covers and area of about 100,000 square kilometers from latitude 35 degrees to 38 degrees 15 minutes North to longitude 115 degrees to 118 degrees West, with the flow system proper comprising about 45,000 square kilometers. The Death Valley regional ground-water flow system is one of the larger flow systems within the Southwestern United States and includes in its boundaries the Nevada Test Site, Yucca Mountain, and much of Death Valley. Part of this study includes the construction of a three-dimensional hydrogeologic framework model to serve as the foundation for the development of a steady-state regional ground-water flow model. The digital framework model provides a computer-based description of the geometry and composition of the hydro geologic units that control regional flow. The framework model of the region was constructed by merging two previous framework models constructed for the Yucca Mountain Project and the Environmental Restoration Program Underground Test Area studies at the Nevada Test Site. The hydrologic characteristics of the region result from a currently arid climate and complex geology. Interbasinal regional ground-water flow occurs through a thick carbonate-rock sequence of Paleozoic age, a locally thick volcanic-rock sequence of Tertiary age, and basin-fill alluvium of Tertiary and Quaternary age. Throughout the system, deep and shallow ground-water flow may be controlled by extensive and pervasive regional and local faults and fractures. The framework model was constructed using data from several sources to define the geometry of the regional hydrogeologic units. These data sources include (1) a 1:250,000-scale hydrogeologic-map compilation of the region; (2) regional-scale geologic cross

  10. Three-Dimensional Numerical Evaluation of Thermal Performance of Uninsulated Wall Assemblies: Preprint

    Energy Technology Data Exchange (ETDEWEB)

    Ridouane, E. H.; Bianchi, M.

    2011-11-01

    This study describes a detailed three-dimensional computational fluid dynamics modeling to evaluate the thermal performance of uninsulated wall assemblies accounting for conduction through framing, convection, and radiation. The model allows for material properties variations with temperature. Parameters that were varied in the study include ambient outdoor temperature and cavity surface emissivity. Understanding the thermal performance of uninsulated wall cavities is essential for accurate prediction of energy use in residential buildings. The results can serve as input for building energy simulation tools for modeling the temperature dependent energy performance of homes with uninsulated walls.

  11. Multi-GPU hybrid programming accelerated three-dimensional phase-field model in binary alloy

    Directory of Open Access Journals (Sweden)

    Changsheng Zhu

    2018-03-01

    Full Text Available In the process of dendritic growth simulation, the computational efficiency and the problem scales have extremely important influence on simulation efficiency of three-dimensional phase-field model. Thus, seeking for high performance calculation method to improve the computational efficiency and to expand the problem scales has a great significance to the research of microstructure of the material. A high performance calculation method based on MPI+CUDA hybrid programming model is introduced. Multi-GPU is used to implement quantitative numerical simulations of three-dimensional phase-field model in binary alloy under the condition of multi-physical processes coupling. The acceleration effect of different GPU nodes on different calculation scales is explored. On the foundation of multi-GPU calculation model that has been introduced, two optimization schemes, Non-blocking communication optimization and overlap of MPI and GPU computing optimization, are proposed. The results of two optimization schemes and basic multi-GPU model are compared. The calculation results show that the use of multi-GPU calculation model can improve the computational efficiency of three-dimensional phase-field obviously, which is 13 times to single GPU, and the problem scales have been expanded to 8193. The feasibility of two optimization schemes is shown, and the overlap of MPI and GPU computing optimization has better performance, which is 1.7 times to basic multi-GPU model, when 21 GPUs are used.

  12. Three dimensional heat transport modeling in Vossoroca reservoir

    Science.gov (United States)

    Arcie Polli, Bruna; Yoshioka Bernardo, Julio Werner; Hilgert, Stephan; Bleninger, Tobias

    2017-04-01

    Freshwater reservoirs are used for many purposes as hydropower generation, water supply and irrigation. In Brazil, according to the National Energy Balance of 2013, hydropower energy corresponds to 70.1% of the Brazilian demand. Superficial waters (which include rivers, lakes and reservoirs) are the most used source for drinking water supply - 56% of the municipalities use superficial waters as a source of water. The last two years have shown that the Brazilian water and electricity supply is highly vulnerable and that improved management is urgently needed. The construction of reservoirs affects physical, chemical and biological characteristics of the water body, e.g. stratification, temperature, residence time and turbulence reduction. Some water quality issues related to reservoirs are eutrophication, greenhouse gas emission to the atmosphere and dissolved oxygen depletion in the hypolimnion. The understanding of the physical processes in the water body is fundamental to reservoir management. Lakes and reservoirs may present a seasonal behavior and stratify due to hydrological and meteorological conditions, and especially its vertical distribution may be related to water quality. Stratification can control heat and dissolved substances transport. It has been also reported the importance of horizontal temperature gradients, e.g. inflows and its density and processes of mass transfer from shallow to deeper regions of the reservoir, that also may impact water quality. Three dimensional modeling of the heat transport in lakes and reservoirs is an important tool to the understanding and management of these systems. It is possible to estimate periods of large vertical temperature gradients, inhibiting vertical transport and horizontal gradients, which could be responsible for horizontal transport of heat and substances (e.g. differential cooling or inflows). Vossoroca reservoir was constructed in 1949 by the impoundment of São João River and is located near to

  13. Numerical investigation on layout optimization of obstacles in a three-dimensional passive micromixer.

    Science.gov (United States)

    Chen, Xueye; Zhao, Zhongyi

    2017-04-29

    This paper aims at layout optimization design of obstacles in a three-dimensional T-type micromixer. Numerical analysis shows that the direction of flow velocity change constantly due to the obstacles blocking, which produces the chaotic convection and increases species mixing effectively. The orthogonal experiment method was applied for determining the effects of some key parameters on mixing efficiency. The weights in the order are: height of obstacles > geometric shape > symmetry = number of obstacles. Based on the optimized results, a multi-units obstacle micromixer was designed. Compared with T-type micromixer, the multi-units obstacle micromixer is more efficient, and more than 90% mixing efficiency were obtained for a wide range of peclet numbers. It can be demonstrated that the presented optimal design method of obstacles layout in three-dimensional microchannels is a simple and effective technology to improve species mixing in microfluidic devices. The obstacles layout methodology has the potential for applications in chemical engineering and bioengineering. Copyright © 2017 Elsevier B.V. All rights reserved.

  14. A three-dimensional non-isothermal model for a membraneless direct methanol redox fuel cell

    Science.gov (United States)

    Wei, Lin; Yuan, Xianxia; Jiang, Fangming

    2018-05-01

    In the membraneless direct methanol redox fuel cell (DMRFC), three-dimensional electrodes contribute to the reduction of methanol crossover and the open separator design lowers the system cost and extends its service life. In order to better understand the mechanisms of this configuration and further optimize its performance, the development of a three-dimensional numerical model is reported in this work. The governing equations of the multi-physics field are solved based on computational fluid dynamics methodology, and the influence of the CO2 gas is taken into consideration through the effective diffusivities. The numerical results are in good agreement with experimental data, and the deviation observed for cases of large current density may be related to the single-phase assumption made. The three-dimensional electrode is found to be effective in controlling methanol crossover in its multi-layer structure, while it also increases the flow resistance for the discharging products. It is found that the current density distribution is affected by both the electronic conductivity and the concentration of reactants, and the temperature rise can be primarily attributed to the current density distribution. The sensitivity and reliability of the model are analyzed through the investigation of the effects of cell parameters, including porosity values of gas diffusion layers and catalyst layers, methanol concentration and CO2 volume fraction, on the polarization characteristics.

  15. Modelo numérico tri-dimensional linear da plataforma continental do Estado do Maranhão Linear three-dimensional numerical model of Maranhão State continental shelf

    Directory of Open Access Journals (Sweden)

    José Edson Rodrigues Pereira

    1995-01-01

    Full Text Available Um modelo numérico hidrodinámico tri-dimensional linear, do tipo Heaps, foi implementado para a plataforma continental do Estado do Maranhão, visando a simulação da circulação gerada por efeitos astronômicos e meteorológicos na área. O modelo foi processado para cinco condições, a fim de calcular a circulação na plataforma devida aos seguintes efeitos: componente de maré semi-diurna lunar principal (M2, composição das principais componentes astronômicas de maré na área, condições meteorológicas médias de verão, condições meteorológicas médias de inverno e forçantes de maré em períodos específicos de interesse. Mapas cotidais e elipses de correntes da componente M2 foram obtidos, sendo esta componente preponderante na circulação local. Elevações e correntes sazonais médias são, em geral, muito menores que as astronômicas, permitindo o uso apenas de forçantes de maré em previsões hidrodinámicas. As simulações do modelo foram satisfatórias na plataforma e menos precisas nas baías e áreas internas rasas, onde atrasos de fase significativos são observados, devido a efeitos de menor escala que a adotada pelo modelo.A linear three-dimensional hydrodynamical numerical model, Heaps type, was implemented to the continental shelf of Maranhão State, aiming the simulation of the circulation generated by astronomical and meteorological effects in that area. Five runs of the model were performed, in order to compute the circulation in the shelf due to the following effects: principal lunar semi-diurnal component (M2, composition of the principal astronomical components in the area, mean summer meteorological conditions, mean winter meteorological conditions and tidal forcing in specific periods of interest. M2 cotidal maps and currents ellipses were obtained, that one being the most important component in the tidal circulation. Mean seasonal elevations and currents are generally much smaller than the

  16. Pseudo three-dimensional modeling of particle-fuel packing using distinct element method

    International Nuclear Information System (INIS)

    Yuki, Daisuke; Takata, Takashi; Yamaguchi, Akira

    2007-01-01

    Vibration-based packing of sphere-pac fuel is a key technology in a nuclear fuel manufacturing. In the production process of sphere-pac fuel, a Mixed Oxide (MOX) fuel is formed to spherical form and is packed in a cladding tube by adding a vibration force. In the present study, we have developed a numerical simulation method to investigate the behavior of the particles in a vibrated tube using the Distinct Element Method (DEM). In general, the DEM requires a significant computational cost. Therefore we propose a new approach in which a small particle can move through the space between three larger particles even in the two-dimensional simulation. We take into account an equivalent three-dimensional effect in the equations of motion. Thus it is named pseudo three-dimensional modeling. (author)

  17. 3D-Ising model as a string theory in three-dimensional euclidean space

    International Nuclear Information System (INIS)

    Sedrakyan, A.

    1992-11-01

    A three-dimensional string model is analyzed in the strong coupling regime. The contribution of surfaces with different topology to the partition function is essential. A set of corresponding models is discovered. Their critical indices, which depend on two integers (m,n) are calculated analytically. The critical indices of the three-dimensional Ising model should belong to this set. A possible connection with the chain of three dimensional lattice Pott's models is pointed out. (author) 22 refs.; 2 figs

  18. Alternating-direction implicit numerical solution of the time-dependent, three-dimensional, single fluid, resistive magnetohydrodynamic equations

    Energy Technology Data Exchange (ETDEWEB)

    Finan, C.H. III

    1980-12-01

    Resistive magnetohydrodynamics (MHD) is described by a set of eight coupled, nonlinear, three-dimensional, time-dependent, partial differential equations. A computer code, IMP (Implicit MHD Program), has been developed to solve these equations numerically by the method of finite differences on an Eulerian mesh. In this model, the equations are expressed in orthogonal curvilinear coordinates, making the code applicable to a variety of coordinate systems. The Douglas-Gunn algorithm for Alternating-Direction Implicit (ADI) temporal advancement is used to avoid the limitations in timestep size imposed by explicit methods. The equations are solved simultaneously to avoid syncronization errors.

  19. Processing and display of three-dimensional arrays of numerical data using octree encoding

    International Nuclear Information System (INIS)

    Amans, J.L.; Antoine, M.; Darier, P.

    1986-04-01

    The analysis of three-dimensional (3-D) arrays of numerical data from medical, industrial or scientific imaging, by synthetic generation of realistic images, has been widely developed. The Octree encoding, that organizes the volume data in a hierarchical tree structure, has some interesting features for 3-D arrays of data processing. The Octree encoding method, based on the recursive subdivision of a 3-D array, is an extension of the Quadtree encoding in the two-dimensional plane. We have developed a software package to validate the basic Octree encoding methodology for some manipulation and display operations of volume data. The contribution introduces the technique we have used (called ''overlay technique'') to make the projection operation of an Octree on a Quadtree encoded image plane. The application of this technique to the hidden surface display is presented [fr

  20. Survey of a numerical procedure for the solution of hyperbolic systems of three dimensional fluid flow

    International Nuclear Information System (INIS)

    Graf, U.

    1986-01-01

    A combination of several numerical methods is used to construct a procedure for effective calculation of complex three-dimensional fluid flow problems. The split coefficient matrix (SCM) method is used so that the differenced equations of the hyperbolic system do not disturb correct signal propagation. The semi-discretisation of the equations of the SCM method is done with the asymmetric, separated region, weighted residual (ASWR) method to give accurate solutions on a relatively coarse mesh. For the resulting system of ordinary differential equations, a general-purpose ordinary differential equation solver is used in conjunction with a method of fractional steps for an economic solution of the large system of linear equations. (orig.) [de

  1. Numerical Experiments on Advective Transport in Large Three-Dimensional Discrete Fracture Networks

    Science.gov (United States)

    Makedonska, N.; Painter, S. L.; Karra, S.; Gable, C. W.

    2013-12-01

    Modeling of flow and solute transport in discrete fracture networks is an important approach for understanding the migration of contaminants in impermeable hard rocks such as granite, where fractures provide dominant flow and transport pathways. The discrete fracture network (DFN) model attempts to mimic discrete pathways for fluid flow through a fractured low-permeable rock mass, and may be combined with particle tracking simulations to address solute transport. However, experience has shown that it is challenging to obtain accurate transport results in three-dimensional DFNs because of the high computational burden and difficulty in constructing a high-quality unstructured computational mesh on simulated fractures. An integrated DFN meshing [1], flow, and particle tracking [2] simulation capability that enables accurate flow and particle tracking simulation on large DFNs has recently been developed. The new capability has been used in numerical experiments on advective transport in large DFNs with tens of thousands of fractures and millions of computational cells. The modeling procedure starts from the fracture network generation using a stochastic model derived from site data. A high-quality computational mesh is then generated [1]. Flow is then solved using the highly parallel PFLOTRAN [3] code. PFLOTRAN uses the finite volume approach, which is locally mass conserving and thus eliminates mass balance problems during particle tracking. The flow solver provides the scalar fluxes on each control volume face. From the obtained fluxes the Darcy velocity is reconstructed for each node in the network [4]. Velocities can then be continuously interpolated to any point in the domain of interest, thus enabling random walk particle tracking. In order to describe the flow field on fractures intersections, the control volume cells on intersections are split into four planar polygons, where each polygon corresponds to a piece of a fracture near the intersection line. Thus

  2. Three-Dimensional Modeling of Glass Lens Molding

    DEFF Research Database (Denmark)

    Sarhadi, Ali; Hattel, Jesper Henri; Hansen, Hans Nørgaard

    2015-01-01

    The required accuracy for the final dimensions of the molded lenses in wafer-based precision glass molding as well as the need for elimination of costly experimental trial and error calls for numerical simulations. This study deals with 3D thermo-mechanical modeling of the wafer-based precision...... glass lens molding process. First, a comprehensive 3D thermo-mechanical model of glass is implemented into a FORTRAN user subroutine (UMAT) in the FE program ABAQUS, and the developed FE model is validated with both a well-known sandwich seal test and experimental results of precision molding of several...... glass rings. Afterward, 3D thermo-mechanical modeling of the wafer-based glass lens manufacturing is performed to suggest a proper molding program (i.e., the proper set of process parameters including preset force-time and temperature-time histories) for molding a wafer to a desired dimension...

  3. Three-dimensional numerical reservoir simulation of the EGS Demonstration Project at The Geysers geothermal field

    Science.gov (United States)

    Borgia, Andrea; Rutqvist, Jonny; Oldenburg, Curt M.; Hutchings, Lawrence; Garcia, Julio; Walters, Mark; Hartline, Craig; Jeanne, Pierre; Dobson, Patrick; Boyle, Katie

    2013-04-01

    The Enhanced Geothermal System (EGS) Demonstration Project, currently underway at the Northwest Geysers, California, aims to demonstrate the feasibility of stimulating a deep high-temperature reservoir (up to 400 °C) through water injection over a 2-year period. On October 6, 2011, injection of 25 l/s started from the Prati 32 well at a depth interval of 1850-2699 m below sea level. After a period of almost 2 months, the injection rate was raised to 63 l/s. The flow rate was then decreased to 44 l/s after an additional 3.5 months and maintained at 25 l/s up to August 20, 2012. Significant well-head pressure changes were recorded at Prati State 31 well, which is separated from Prati 32 by about 500 m at reservoir level. More subdued pressure increases occur at greater distances. The water injection caused induced seismicity in the reservoir in the vicinity of the well. Microseismic monitoring and interpretation shows that the cloud of seismic events is mainly located in the granitic intrusion below the injection zone, forming a cluster elongated SSE-NNW (azimuth 170°) that dips steeply to the west. In general, the magnitude of the events increases with depth and the hypocenter depth increases with time. This seismic cloud is hypothesized to correlate with enhanced permeability in the high-temperature reservoir and its variation with time. Based on the existing borehole data, we use the GMS™ GUI to construct a realistic three-dimensional (3D) geologic model of the Northwest Geysers geothermal field. This model includes, from the top down, a low permeability graywacke layer that forms the caprock for the reservoir, an isothermal steam zone (known as the normal temperature reservoir) within metagraywacke, a hornfels zone (where the high-temperature reservoir is located), and a felsite layer that is assumed to extend downward to the magmatic heat source. We then map this model onto a rectangular grid for use with the TOUGH2 multiphase, multicomponent, non

  4. Three dimensional grain boundary modeling in polycrystalline plasticity

    Science.gov (United States)

    Yalçinkaya, Tuncay; Özdemir, Izzet; Fırat, Ali Osman

    2018-05-01

    At grain scale, polycrystalline materials develop heterogeneous plastic deformation fields, localizations and stress concentrations due to variation of grain orientations, geometries and defects. Development of inter-granular stresses due to misorientation are crucial for a range of grain boundary (GB) related failure mechanisms, such as stress corrosion cracking (SCC) and fatigue cracking. Local crystal plasticity finite element modelling of polycrystalline metals at micron scale results in stress jumps at the grain boundaries. Moreover, the concepts such as the transmission of dislocations between grains and strength of the grain boundaries are not included in the modelling. The higher order strain gradient crystal plasticity modelling approaches offer the possibility of defining grain boundary conditions. However, these conditions are mostly not dependent on misorientation of grains and can define only extreme cases. For a proper definition of grain boundary behavior in plasticity, a model for grain boundary behavior should be incorporated into the plasticity framework. In this context, a particular grain boundary model ([l]) is incorporated into a strain gradient crystal plasticity framework ([2]). In a 3-D setting, both bulk and grain boundary models are implemented as user-defined elements in Abaqus. The strain gradient crystal plasticity model works in the bulk elements and considers displacements and plastic slips as degree of freedoms. Interface elements model the plastic slip behavior, yet they do not possess any kind of mechanical cohesive behavior. The physical aspects of grain boundaries and the performance of the model are addressed through numerical examples.

  5. Micromechanical Modeling of Solid Oxide Fuel Cell Anode Supports based on Three-dimensional Reconstructions

    DEFF Research Database (Denmark)

    Kwok, Kawai; Jørgensen, Peter Stanley; Frandsen, Henrik Lund

    2014-01-01

    Ni-3YSZ in the operating temperature through numerical micromechanical modeling. Three-dimensional microstructures of Ni-3YSZ anode supports are reconstructed from a two-dimensional image stack obtained via focused ion beam tomography. Time-dependent stress distributions in the microscopic scale...... are computed by the finite element method. The macroscopic creep response of the porous anode support is determined based on homogenization theory. It is shown that micromechanical modeling provides an effective tool to study the effect of microstructures on the macroscopic properties....

  6. Processing and display of medical three dimensional arrays of numerical data using octree encoding

    International Nuclear Information System (INIS)

    Amans, J.L.; Darier, P.

    1985-01-01

    Imaging modalities such as X-ray computerized Tomography (CT), Nuclear Medicine and Nuclear Magnetic Resonance can produce three-dimensional (3-D) arrays of numerical data of medical object internal structures. The analysis of 3-D data by synthetic generation of realistic images is an important area of computer graphics and imaging. We are currently developing experimental software that allows the analysis, processing and display of 3-D arrays of numerical data that are organized in a related hierarchical data structure using OCTREE (octal-tree) encoding technique based on a recursive subdivision of the data volume. The OCTREE encoding structure is an extension of the two-dimensional tree structure: the quadtree, developed for image processing applications. Before any operations, the 3-D array of data is OCTREE encoded, thereafter all processings are concerned with the encoded object. The elementary process for the elaboration of a synthetic image includes: conditioning the volume: volume partition (numerical and spatial segmentation), choice of the view-point..., two dimensional display, either by spatial integration (radiography) or by shaded surface representation. This paper introduces these different concepts and specifies the advantages of OCTREE encoding techniques in realizing these operations. Furthermore the application of the OCTREE encoding scheme to the display of 3-D medical volumes generated from multiple CT scans is presented

  7. Semantic description of three-dimensional models of Bologna porches

    Directory of Open Access Journals (Sweden)

    Massimo Ballabeni

    2015-07-01

    Full Text Available The study is part of a broader search coordinated by the Department of Architecture of the University of Bologna, the Cineca and the city of Bologna for the nomination of the city porticoes in the UNESCO World Heritage Site. The study describes, first, the problems and the methods adopted for the survey, the numerical modeling and visualization of the arcades models. In addition, the paper aims to describe a method for the semantic studying of the porticoes architecture and the segmentation of the models. The goal is also to establish an integrated approach to the semantic cataloguing of the Bologna arcades based on historical, material, formal, dimensional and theoretical data, and to make this information easily readable and communicable.

  8. Accuracy of three-dimensional, paper-based models generated using a low-cost, three-dimensional printer.

    Science.gov (United States)

    Olszewski, Raphael; Szymor, Piotr; Kozakiewicz, Marcin

    2014-12-01

    Our study aimed to determine the accuracy of a low-cost, paper-based 3D printer by comparing a dry human mandible to its corresponding three-dimensional (3D) model using a 3D measuring arm. One dry human mandible and its corresponding printed model were evaluated. The model was produced using DICOM data from cone beam computed tomography. The data were imported into Maxilim software, wherein automatic segmentation was performed, and the STL file was saved. These data were subsequently analysed, repaired, cut and prepared for printing with netfabb software. These prepared data were used to create a paper-based model of a mandible with an MCor Matrix 300 printer. Seventy-six anatomical landmarks were chosen and measured 20 times on the mandible and the model using a MicroScribe G2X 3D measuring arm. The distances between all the selected landmarks were measured and compared. Only landmarks with a point inaccuracy less than 30% were used in further analyses. The mean absolute difference for the selected 2016 measurements was 0.36 ± 0.29 mm. The mean relative difference was 1.87 ± 3.14%; however, the measurement length significantly influenced the relative difference. The accuracy of the 3D model printed using the paper-based, low-cost 3D Matrix 300 printer was acceptable. The average error was no greater than that measured with other types of 3D printers. The mean relative difference should not be considered the best way to compare studies. The point inaccuracy methodology proposed in this study may be helpful in future studies concerned with evaluating the accuracy of 3D rapid prototyping models. Copyright © 2014 European Association for Cranio-Maxillo-Facial Surgery. Published by Elsevier Ltd. All rights reserved.

  9. Three-dimensional numerical simulations of turbulent cavitating flow in a rectangular channel

    Science.gov (United States)

    Iben, Uwe; Makhnov, Andrei; Schmidt, Alexander

    2018-05-01

    Cavitation is a phenomenon of formation of bubbles (cavities) in liquid as a result of pressure drop. Cavitation plays an important role in a wide range of applications. For example, cavitation is one of the key problems of design and manufacturing of pumps, hydraulic turbines, ship's propellers, etc. Special attention is paid to cavitation erosion and to performance degradation of hydraulic devices (noise, fluctuations of the mass flow rate, etc.) caused by the formation of a two-phase system with an increased compressibility. Therefore, development of a model to predict cavitation inception and collapse of cavities in high-speed turbulent flows is an important fundamental and applied task. To test the algorithm three-dimensional simulations of turbulent flow of a cavitating liquid in a rectangular channel have been conducted. The obtained results demonstrate the efficiency and robustness of the formulated model and the algorithm.

  10. NUMERICAL RESEARCH ON THE THREE-DIMENSIONAL FIBER ORIENTATION DISTRIBUTION IN PLANAR SUSPENSION FLOWS

    Directory of Open Access Journals (Sweden)

    Qihua Zhang

    Full Text Available Abstract To describe flow-induced fiber orientation, the Fokker-Planck equation is widely applied in the processing of composites and fiber suspensions. The analytical solution only exists when the Péclet number is infinite. So developing a numerical method covering a full range of Péclet number is of great significance. To accurately solve the Fokker-Planck equation, a numerical scheme based on the finite volume method is developed. Using spherical symmetry, the boundary is discretized and formulated into a cyclic tridiagonal matrix which is further solved by the CTDMA algorithm. To examine its validity, benchmark tests over a wide range of Péclet number are performed in a simple shear flow. For Pe=∞, the results agree well with the analytical solutions. For the other Pe numbers, the results are compared to results available in the literature. The tests show that this algorithm is accurate, stable, and globally conservative. Furthermore, this algorithm can be extended and used to predict the three-dimensional orientation distribution of complex suspension flows.

  11. Optical asymmetric cryptography using a three-dimensional space-based model

    International Nuclear Information System (INIS)

    Chen, Wen; Chen, Xudong

    2011-01-01

    In this paper, we present optical asymmetric cryptography combined with a three-dimensional (3D) space-based model. An optical multiple-random-phase-mask encoding system is developed in the Fresnel domain, and one random phase-only mask and the plaintext are combined as a series of particles. Subsequently, the series of particles is translated along an axial direction, and is distributed in a 3D space. During image decryption, the robustness and security of the proposed method are further analyzed. Numerical simulation results are presented to show the feasibility and effectiveness of the proposed optical image encryption method

  12. A three-dimensional numerical study and comparison between the air side model and the air/water side model of a plain fin-and-tube heat exchanger

    International Nuclear Information System (INIS)

    Borrajo-Pelaez, R.; Ortega-Casanova, J.; Cejudo-Lopez, J.M.

    2010-01-01

    CFD is becoming an important heat exchanger research technique. It constitutes an inexpensive prediction method, avoiding the need of testing numerous prototypes. Current work in this field is mostly based on air flow models assuming constant temperature of fin-and-tube surface. The purpose of this paper is to present an enhanced model, whose innovation lies in considering additionally the water flow in the tubes and the conduction heat transfer through the fin and tubes, to demonstrate that the neglect of these two phenomena causes a simulation result accuracy reduction. 3-D Numerical simulations were accomplished to compare both an air side and an air/water side model. The influence of Reynolds number, fin pitch, tube diameter, fin length and fin thickness was studied. The exchanger performance was evaluated through two non-dimensional parameters: the air side Nusselt number and a friction factor. It was found that the influence of the five parameters over the mechanical and thermal efficiencies can be well reported using these non-dimensional coefficients. The results from the improved model showed more real temperature contours, with regard to those of the simplified model. Therefore, a higher accuracy of the heat transfer was achieved, yielding better predictions on the exchanger performance.

  13. Three-dimensional FDEM numerical simulation of failure processes observed in Opalinus Clay laboratory samples

    Directory of Open Access Journals (Sweden)

    Omid Mahabadi

    2014-12-01

    Full Text Available This study presents the first step of a research project that aims at using a three-dimensional (3D hybrid finite-discrete element method (FDEM to investigate the development of an excavation damaged zone (EDZ around tunnels in a clay shale formation known as Opalinus Clay. The 3D FDEM was first calibrated against standard laboratory experiments, including Brazilian disc test and uniaxial compression test. The effect of increasing confining pressure on the mechanical response and fracture propagation of the rock was quantified under triaxial compression tests. Polyaxial (or true triaxial simulations highlighted the effect of the intermediate principal stress (σ2 on fracture directions in the model: as the intermediate principal stress increased, fractures tended to align in the direction parallel to the plane defined by the major and intermediate principal stresses. The peak strength was also shown to vary with changing σ2.

  14. Three-dimensional two-phase mass transport model for direct methanol fuel cells

    International Nuclear Information System (INIS)

    Yang, W.W.; Zhao, T.S.; Xu, C.

    2007-01-01

    A three-dimensional (3D) steady-state model for liquid feed direct methanol fuel cells (DMFC) is presented in this paper. This 3D mass transport model is formed by integrating five sub-models, including a modified drift-flux model for the anode flow field, a two-phase mass transport model for the porous anode, a single-phase model for the polymer electrolyte membrane, a two-phase mass transport model for the porous cathode, and a homogeneous mist-flow model for the cathode flow field. The two-phase mass transport models take account the effect of non-equilibrium evaporation/ condensation at the gas-liquid interface. A 3D computer code is then developed based on the integrated model. After being validated against the experimental data reported in the literature, the code was used to investigate numerically transport behaviors at the DMFC anode and their effects on cell performance

  15. Three-dimensional simulations of Bingham plastic flows with the multiple-relaxation-time lattice Boltzmann model

    OpenAIRE

    Song-Gui Chen; Chuan-Hu Zhang; Yun-Tian Feng; Qi-Cheng Sun; Feng Jin

    2016-01-01

    This paper presents a three-dimensional (3D) parallel multiple-relaxation-time lattice Boltzmann model (MRT-LBM) for Bingham plastics which overcomes numerical instabilities in the simulation of non-Newtonian fluids for the Bhatnagar–Gross–Krook (BGK) model. The MRT-LBM and several related mathematical models are briefly described. Papanastasiou’s modified model is incorporated for better numerical stability. The impact of the relaxation parameters of the model is studied in detail. The MRT-L...

  16. A three-dimensional thermal and electromagnetic model of whole limb heating with a MAPA.

    Science.gov (United States)

    Charny, C K; Levin, R L

    1991-10-01

    Previous studies by the authors have shown that if properly implemented, the Pennes assumptions can be applied to quantify bioheat transfer during extremity heating. Given its relative numerical simplicity and its ability to predict temperatures in thermoregulated tissue, the Pennes model of bioheat transfer was utilized in a three-dimensional thermal model of limb heating. While the arterial blood temperature was assumed to be radially uniform within a cross section of the limb, axial gradients in the arterial and venous blood temperatures were computed with this three-dimensional model. A realistically shaped, three-dimensional finite element model of a tumor-bearing human lower leg was constructed and was "attached" mathematically to the whole body thermal model of man described in previous studies by the authors. The central as well as local thermoregulatory feedback control mechanisms which determine blood perfusion to the various tissues and rate of evaporation by sweating were input into the limb model. In addition, the temperature of the arterial blood which feeds into the most proximal section of the lower leg was computed by the whole body thermal model. The variations in the shape of the tissues which comprise the limb were obtained from computerized tomography scans. Axial variations in the energy deposition patterns along the length of the limb exposed to a miniannular phased array (MAPA) applicator were also input into this model of limb heating. Results indicate that proper positioning of the limb relative to the MAPA is a significant factor in determining the effectiveness of the treatment. A patient-specific hyperthermia protocol can be designed using this coupled electromagnetic and thermal model.

  17. Three-Dimensional Numerical Analysis of LOX/Kerosene Engine Exhaust Plume Flow Field Characteristics

    Directory of Open Access Journals (Sweden)

    Hong-hua Cai

    2017-01-01

    Full Text Available Aiming at calculating and studying the flow field characteristics of engine exhaust plume and comparative analyzing the effects of different chemical reaction mechanisms on the engine exhaust plume flow field characteristics, a method considering fully the combustion state influence is put forward, which is applied to exhaust plume flow field calculation of multinozzle engine. On this basis, a three-dimensional numerical analysis of the effects of different chemical reaction mechanisms on LOX/kerosene engine exhaust plume flow field characteristics was carried out. It is found that multistep chemical reaction can accurately describe the combustion process in the LOX/kerosene engine, the average chamber pressure from the calculation is 4.63% greater than that of the test, and the average chamber temperature from the calculation is 3.34% greater than that from the thermodynamic calculation. The exhaust plumes of single nozzle and double nozzle calculated using the global chemical reaction are longer than those using the multistep chemical reaction; the highest temperature and the highest velocity on the plume axis calculated using the former are greater than that using the latter. The important influence of chemical reaction mechanism must be considered in the study of the fixing structure of double nozzle engine on the rocket body.

  18. Three-dimensional semi-idealized model for estuarine turbidity maxima in tidally dominated estuaries

    NARCIS (Netherlands)

    Kumar, Mohit; Schuttelaars, Henk M.; Roos, Pieter C.

    2017-01-01

    We develop a three-dimensional idealized model that is specifically aimed at gaining insight in the physical mechanisms resulting in the formation of estuarine turbidity maxima in tidally dominated estuaries. First, the three-dimensional equations for water motion and suspended sediment

  19. Usefulness Of Three-Dimensional Printing Models for Patients with Stoma Construction

    Directory of Open Access Journals (Sweden)

    Tetsuro Tominaga

    2016-04-01

    Full Text Available The use of patient-specific organ models in three-dimensional printing systems could be helpful for the education of patients and medical students. The aim of this study was to clarify whether the use of patient-specific stoma models is helpful for patient education. From January 2014 to September 2014, 5 patients who underwent colorectal surgery and for whom a temporary or permanent stoma had been created were involved in this study. Three-dimensional stoma models and three-dimensional face plates were created. The patients’ ages ranged from 59 to 81 years. Four patients underwent stoma construction because of rectal cancer, and 1 underwent stoma construction because of colon stenosis secondary to recurrent cancer. All patients were educated about their stoma and potential stoma-associated problems using three-dimensional stoma models, and all practiced cutting face plates using three-dimensional face plates. The models were also used during medical staff conferences to discuss current issues. All patients understood their problems and finally became self-reliant. The recent availability of three-dimensional printers has enabled the creation of many organ models, and full-scale stoma and face plate models are now available for patient education on cutting an appropriately individualized face plate. Thus, three-dimensional printers could enable fewer skin problems than are currently associated with daily stomal care.

  20. Three-Dimensional Assembly Tolerance Analysis Based on the Jacobian-Torsor Statistical Model

    Directory of Open Access Journals (Sweden)

    Peng Heping

    2017-01-01

    Full Text Available The unified Jacobian-Torsor model has been developed for deterministic (worst case tolerance analysis. This paper presents a comprehensive model for performing statistical tolerance analysis by integrating the unified Jacobian-Torsor model and Monte Carlo simulation. In this model, an assembly is sub-divided into surfaces, the Small Displacements Torsor (SDT parameters are used to express the relative position between any two surfaces of the assembly. Then, 3D dimension-chain can be created by using a surface graph of the assembly and the unified Jacobian-Torsor model is developed based on the effect of each functional element on the whole functional requirements of products. Finally, Monte Carlo simulation is implemented for the statistical tolerance analysis. A numerical example is given to demonstrate the capability of the proposed method in handling three-dimensional assembly tolerance analysis.

  1. Three-dimensional hydrological and thermal property models of Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Rautman, C.A.; McKenna, S.A.

    1997-11-01

    This report describes the creation of three-dimensional numerical models of selected rock-matrix properties for the region of the potential high-level nuclear waste repository site at Yucca Mountain, which is located in southern Nevada. The models have been generated for a majority of the unsaturated and shallow saturated zone within an area referred to within the Yucca Mountain Site Characterization project as the site area. They comprise a number of material properties of importance both to detailed process-level modeling activities and to more summary-style performance assessment modeling. The material properties within these models are both spatially variable (heterogeneous) and spatially correlated, as the rocks are understood from data obtained from site-characterization drill holes widely scattered across the site area

  2. Electronic transport on the spatial structure of the protein: Three-dimensional lattice model

    International Nuclear Information System (INIS)

    Sarmento, R.G.; Frazão, N.F.; Macedo-Filho, A.

    2017-01-01

    Highlights: • The electronic transport on the structure of the three-dimensional lattice model of the protein is studied. • The signing of the current–voltage is directly affected by permutations of the weak bonds in the structure. • Semiconductor behave of the proteins suggest a potential application in the development of novel biosensors. - Abstract: We report a numerical analysis of the electronic transport in protein chain consisting of thirty-six standard amino acids. The protein chains studied have three-dimensional structure, which can present itself in three distinct conformations and the difference consist in the presence or absence of thirteen hydrogen-bondings. Our theoretical method uses an electronic tight-binding Hamiltonian model, appropriate to describe the protein segments modeled by the amino acid chain. We note that the presence and the permutations between weak bonds in the structure of proteins are directly related to the signing of the current–voltage. Furthermore, the electronic transport depends on the effect of temperature. In addition, we have found a semiconductor behave in the models investigated and it suggest a potential application in the development of novel biosensors for molecular diagnostics.

  3. Electronic transport on the spatial structure of the protein: Three-dimensional lattice model

    Energy Technology Data Exchange (ETDEWEB)

    Sarmento, R.G. [Departamento de Ciências Biológicas, Universidade Federal do Piauí, 64800-000 Floriano, PI (Brazil); Frazão, N.F. [Centro de Educação e Saúde, Universidade Federal de Campina Grande, 581750-000 Cuité, PB (Brazil); Macedo-Filho, A., E-mail: amfilho@gmail.com [Campus Prof. Antonio Geovanne Alves de Sousa, Universidade Estadual do Piauí, 64260-000 Piripiri, PI (Brazil)

    2017-01-30

    Highlights: • The electronic transport on the structure of the three-dimensional lattice model of the protein is studied. • The signing of the current–voltage is directly affected by permutations of the weak bonds in the structure. • Semiconductor behave of the proteins suggest a potential application in the development of novel biosensors. - Abstract: We report a numerical analysis of the electronic transport in protein chain consisting of thirty-six standard amino acids. The protein chains studied have three-dimensional structure, which can present itself in three distinct conformations and the difference consist in the presence or absence of thirteen hydrogen-bondings. Our theoretical method uses an electronic tight-binding Hamiltonian model, appropriate to describe the protein segments modeled by the amino acid chain. We note that the presence and the permutations between weak bonds in the structure of proteins are directly related to the signing of the current–voltage. Furthermore, the electronic transport depends on the effect of temperature. In addition, we have found a semiconductor behave in the models investigated and it suggest a potential application in the development of novel biosensors for molecular diagnostics.

  4. Three-dimensional modeling and simulation of asphalt concrete mixtures based on X-ray CT microstructure images

    Directory of Open Access Journals (Sweden)

    Hainian Wang

    2014-02-01

    Full Text Available X-ray CT (computed tomography was used to scan asphalt mixture specimen to obtain high resolution continuous cross-section images and the meso-structure. According to the theory of three-dimensional (3D reconstruction, the 3D reconstruction algorithm was investigated in this paper. The key to the reconstruction technique is the acquisition of the voxel positions and the relationship between the pixel element and node. Three-dimensional numerical model of asphalt mixture specimen was created by a self-developed program. A splitting test was conducted to predict the stress distributions of the asphalt mixture and verify the rationality of the 3D model.

  5. MMIC Structures Based on A Three-Dimensional Model

    Directory of Open Access Journals (Sweden)

    R. Makri

    2002-01-01

    current distribution is also being taken into account in terms of incident, reflected and transferred waves. The derived matrix is being inverted and the obtained results are the unknown coefficients of the plane waves inside the ‘cells’ and also the reflection R and transfer T coefficients. The derived numerical results concern linear cases, while the examination of non-linear structures have been taken into account in the analytical formulation.

  6. Three-dimensional simplicial quantum gravity and generalized matrix models

    International Nuclear Information System (INIS)

    Ambjoern, J.; Durhuus, B.; Jonsson, T.

    1990-11-01

    We consider a discrete model of Euclidean quantum gravity in three dimensions based on a summation over random simplicial manifolds. We derive some elementary properties of the model and discuss possible 'matrix' models for 3d gravity. (orig.)

  7. Three-dimensional temperature effect modelling of piezoceramic transducers used for Lamb wave based damage detection

    International Nuclear Information System (INIS)

    Kijanka, Piotr; Packo, Pawel; Staszewski, Wieslaw J; Zhu, Xuan; Di Scalea, Francesco Lanza

    2015-01-01

    The paper presents a three-dimensional temperature-dependent model of surface-bonded, low-profile piezoceramic transducers (PZT) used for Lamb wave propagation. The effect of temperature on Lamb wave actuation, propagation and sensing is investigated. The major focus is on the study of actuation and sensing properties of PZT for various temperature levels. These properties are investigated through the electric field analysis of transducers. The temperature effect on transducer bond layers is also investigated. Numerically simulated amplitude responses are analysed for various temperatures and excitation frequencies. Numerical simulations are validated experimentally. The results demonstrate that temperature-dependent physical properties of PZT, bond layers and particularly host structures significantly affect the amplitude and phase of Lamb wave responses. (paper)

  8. [Research progress of three-dimensional digital model for repair and reconstruction of knee joint].

    Science.gov (United States)

    Tong, Lu; Li, Yanlin; Hu, Meng

    2013-01-01

    To review recent advance in the application and research of three-dimensional digital knee model. The recent original articles about three-dimensional digital knee model were extensively reviewed and analyzed. The digital three-dimensional knee model can simulate the knee complex anatomical structure very well. Based on this, there are some developments of new software and techniques, and good clinical results are achieved. With the development of computer techniques and software, the knee repair and reconstruction procedure has been improved, the operation will be more simple and its accuracy will be further improved.

  9. Usefulness Of Three-Dimensional Printing Models for Patients with Stoma Construction

    OpenAIRE

    Tominaga, Tetsuro; Takagi, Katsunori; Takeshita, Hiroaki; Miyamoto, Tomo; Shimoda, Kozue; Matsuo, Ayano; Matsumoto, Keitaro; Hidaka, Shigekazu; Yamasaki, Naoya; Sawai, Terumitsu; Nagayasu, Takeshi

    2016-01-01

    The use of patient-specific organ models in three-dimensional printing systems could be helpful for the education of patients and medical students. The aim of this study was to clarify whether the use of patient-specific stoma models is helpful for patient education. From January 2014 to September 2014, 5 patients who underwent colorectal surgery and for whom a temporary or permanent stoma had been created were involved in this study. Three-dimensional stoma models and three-dimensional face ...

  10. Three-dimensional point-cloud room model in room acoustics simulations

    DEFF Research Database (Denmark)

    Markovic, Milos; Olesen, Søren Krarup; Hammershøi, Dorte

    2013-01-01

    acquisition and its representation with a 3D point-cloud model, as well as utilization of such a model for the room acoustics simulations. A room is scanned with a commercially available input device (Kinect for Xbox360) in two different ways; the first one involves the device placed in the middle of the room...... and rotated around the vertical axis while for the second one the device is moved within the room. Benefits of both approaches were analyzed. The device's depth sensor provides a set of points in a three-dimensional coordinate system which represents scanned surfaces of the room interior. These data are used...... to build a 3D point-cloud model of the room. Several models are created to meet requirements of different room acoustics simulation algorithms: plane fitting and uniform voxel grid for geometric methods and triangulation mesh for the numerical methods. Advantages of the proposed method over the traditional...

  11. Three-dimensional point-cloud room model for room acoustics simulations

    DEFF Research Database (Denmark)

    Markovic, Milos; Olesen, Søren Krarup; Hammershøi, Dorte

    2013-01-01

    acquisition and its representation with a 3D point-cloud model, as well as utilization of such a model for the room acoustics simulations. A room is scanned with a commercially available input device (Kinect for Xbox360) in two different ways; the first one involves the device placed in the middle of the room...... and rotated around the vertical axis while for the second one the device is moved within the room. Benefits of both approaches were analyzed. The device's depth sensor provides a set of points in a three-dimensional coordinate system which represents scanned surfaces of the room interior. These data are used...... to build a 3D point-cloud model of the room. Several models are created to meet requirements of different room acoustics simulation algorithms: plane fitting and uniform voxel grid for geometric methods and triangulation mesh for the numerical methods. Advantages of the proposed method over the traditional...

  12. Three-dimensional ray-tracing model for the study of advanced refractive errors in keratoconus.

    Science.gov (United States)

    Schedin, Staffan; Hallberg, Per; Behndig, Anders

    2016-01-20

    We propose a numerical three-dimensional (3D) ray-tracing model for the analysis of advanced corneal refractive errors. The 3D modeling was based on measured corneal elevation data by means of Scheimpflug photography. A mathematical description of the measured corneal surfaces from a keratoconus (KC) patient was used for the 3D ray tracing, based on Snell's law of refraction. A model of a commercial intraocular lens (IOL) was included in the analysis. By modifying the posterior IOL surface, it was shown that the imaging quality could be significantly improved. The RMS values were reduced by approximately 50% close to the retina, both for on- and off-axis geometries. The 3D ray-tracing model can constitute a basis for simulation of customized IOLs that are able to correct the advanced, irregular refractive errors in KC.

  13. Development of a three-dimensional local scale atmospheric model with turbulence closure model

    International Nuclear Information System (INIS)

    Yamazawa, Hiromi

    1989-05-01

    Through the study to improve SPEEDI's capability, a three-dimensional numerical atmospheric model PHYSIC (Prognostic HYdroStatic model Including turbulence Closure model) was developed to apply it to the transport and diffusion evaluation over complex terrains. The detailed description of the atmospheric model was given. This model consists of five prognostic equations; the momentum equations of horizontal components with the so-called Boussinesq and hydrostatic assumptions, the conservation equations of heat, turbulence kinetic energy and turbulence length scale. The coordinate system used is the terrain following z * coordinate system which allows the existence of complex terrain. The minute formula of the turbulence closure calculation, the surface layer process, the ground surface heat budget, and the atmospheric and solar radiation were also presented. The time integration method used in this model is the Alternating Direction Implicit (A.D.I.) method with a vertically and horizontally staggered grid system. The memory storage needed to execute this model with 31 x 31 x 16 grid points, five layers in soil and double precision variables is about 5.3 MBytes. The CPU time is about 2.2 x 10 -5 s per one step per one grid point with a vector processor FACOM VP-100. (author)

  14. Continuum modeling of three-dimensional truss-like space structures

    Science.gov (United States)

    Nayfeh, A. H.; Hefzy, M. S.

    1978-01-01

    A mathematical and computational analysis capability has been developed for calculating the effective mechanical properties of three-dimensional periodic truss-like structures. Two models are studied in detail. The first, called the octetruss model, is a three-dimensional extension of a two-dimensional model, and the second is a cubic model. Symmetry considerations are employed as a first step to show that the specific octetruss model has four independent constants and that the cubic model has two. The actual values of these constants are determined by averaging the contributions of each rod element to the overall structure stiffness. The individual rod member contribution to the overall stiffness is obtained by a three-dimensional coordinate transformation. The analysis shows that the effective three-dimensional elastic properties of both models are relatively close to each other.

  15. Three dimensional mathematical model of tooth for finite element analysis

    Directory of Open Access Journals (Sweden)

    Puškar Tatjana

    2010-01-01

    Full Text Available Introduction. The mathematical model of the abutment tooth is the starting point of the finite element analysis of stress and deformation of dental structures. The simplest and easiest way is to form a model according to the literature data of dimensions and morphological characteristics of teeth. Our method is based on forming 3D models using standard geometrical forms (objects in programmes for solid modeling. Objective. Forming the mathematical model of abutment of the second upper premolar for finite element analysis of stress and deformation of dental structures. Methods. The abutment tooth has a form of a complex geometric object. It is suitable for modeling in programs for solid modeling SolidWorks. After analyzing the literature data about the morphological characteristics of teeth, we started the modeling dividing the tooth (complex geometric body into simple geometric bodies (cylinder, cone, pyramid,.... Connecting simple geometric bodies together or substricting bodies from the basic body, we formed complex geometric body, tooth. The model is then transferred into Abaqus, a computational programme for finite element analysis. Transferring the data was done by standard file format for transferring 3D models ACIS SAT. Results. Using the programme for solid modeling SolidWorks, we developed three models of abutment of the second maxillary premolar: the model of the intact abutment, the model of the endodontically treated tooth with two remaining cavity walls and the model of the endodontically treated tooth with two remaining walls and inserted post. Conclusion Mathematical models of the abutment made according to the literature data are very similar with the real abutment and the simplifications are minimal. These models enable calculations of stress and deformation of the dental structures. The finite element analysis provides useful information in understanding biomechanical problems and gives guidance for clinical research.

  16. Three-dimensional modeling with finite element codes

    Energy Technology Data Exchange (ETDEWEB)

    Druce, R.L.

    1986-01-17

    This paper describes work done to model magnetostatic field problems in three dimensions. Finite element codes, available at LLNL, and pre- and post-processors were used in the solution of the mathematical model, the output from which agreed well with the experimentally obtained data. The geometry used in this work was a cylinder with ports in the periphery and no current sources in the space modeled. 6 refs., 8 figs.

  17. Development of a Three-Dimensional Hand Model Using Three-Dimensional Stereophotogrammetry: Assessment of Image Reproducibility.

    Directory of Open Access Journals (Sweden)

    Inge A Hoevenaren

    Full Text Available Using three-dimensional (3D stereophotogrammetry precise images and reconstructions of the human body can be produced. Over the last few years, this technique is mainly being developed in the field of maxillofacial reconstructive surgery, creating fusion images with computed tomography (CT data for precise planning and prediction of treatment outcome. Though, in hand surgery 3D stereophotogrammetry is not yet being used in clinical settings.A total of 34 three-dimensional hand photographs were analyzed to investigate the reproducibility. For every individual, 3D photographs were captured at two different time points (baseline T0 and one week later T1. Using two different registration methods, the reproducibility of the methods was analyzed. Furthermore, the differences between 3D photos of men and women were compared in a distance map as a first clinical pilot testing our registration method.The absolute mean registration error for the complete hand was 1.46 mm. This reduced to an error of 0.56 mm isolating the region to the palm of the hand. When comparing hands of both sexes, it was seen that the male hand was larger (broader base and longer fingers than the female hand.This study shows that 3D stereophotogrammetry can produce reproducible images of the hand without harmful side effects for the patient, so proving to be a reliable method for soft tissue analysis. Its potential use in everyday practice of hand surgery needs to be further explored.

  18. TEMPEST: A three-dimensional time-dependent computer program for hydrothermal analysis: Volume 1, Numerical methods and input instructions

    International Nuclear Information System (INIS)

    Trent, D.S.; Eyler, L.L.; Budden, M.J.

    1983-09-01

    This document describes the numerical methods, current capabilities, and the use of the TEMPEST (Version L, MOD 2) computer program. TEMPEST is a transient, three-dimensional, hydrothermal computer program that is designed to analyze a broad range of coupled fluid dynamic and heat transfer systems of particular interest to the Fast Breeder Reactor thermal-hydraulic design community. The full three-dimensional, time-dependent equations of motion, continuity, and heat transport are solved for either laminar or turbulent fluid flow, including heat diffusion and generation in both solid and liquid materials. 10 refs., 22 figs., 2 tabs

  19. Three dimensional hair model by means particles using Blender

    Science.gov (United States)

    Alvarez-Cedillo, Jesús Antonio; Almanza-Nieto, Roberto; Herrera-Lozada, Juan Carlos

    2010-09-01

    The simulation and modeling of human hair is a process whose computational complexity is very large, this due to the large number of factors that must be calculated to give a realistic appearance. Generally, the method used in the film industry to simulate hair is based on particle handling graphics. In this paper we present a simple approximation of how to model human hair using particles in Blender. [Figure not available: see fulltext.

  20. Three-dimensional models of metal-poor stars

    OpenAIRE

    Collet, R.

    2008-01-01

    I present here the main results of recent realistic, 3D, hydrodynamical simulations of convection at the surface of metal-poor red giant stars. I discuss the application of these convection simulations as time-dependent, 3D, hydrodynamical model atmospheres to spectral line formation calculations and abundance analyses. The impact of 3D models on derived elemental abundances is investigated by means of a differential comparison of the line strengths predicted in 3D under the assumption of loc...

  1. String tension in the three-dimensional Abelian Higgs model

    International Nuclear Information System (INIS)

    Farakos, K.; Koutsoumbas, G.; Sarantakos, S.

    1988-01-01

    We measure the expectation values of the Wilson loops for the radially active Abelian Higgs model in three dimensions with Higgs charge q = 1 and q = 2. We observe a drastic fall-off of the area term as we pass to the Higgs phase, as well as a peak of the perimetric term at the phase transition. Implications of our results for other Higgs models are also discussed. (orig.)

  2. Three-dimensional modelling of metal evaporated tape

    International Nuclear Information System (INIS)

    Kay, G.E.

    1999-06-01

    As developments in magnetic recording increase, the demands for high density recording media continue to rise. One particular medium developed towards meeting these needs is the commercially successful metal evaporated (ME) tape. To provide a deeper understanding of the magnetic processes occurring in recording media, theoretical studies are carried out to complement experimental observations. Therefore, this thesis is concerned with developing a micromagnetic model to simulate the magnetic behaviour of ME tape. ME tape consists of bundles of granular columns which are tilted towards the film normal. The morphology of the film influences the magnetic behaviour and a 3D model is developed in this thesis to represent the columnar structure and the granular nature of ME tape. A Monte Carlo algorithm, consisting of a 'move and grow' procedure, is developed to generate an irregular system of spherical grains whose radii were generated from a log-normal distribution. This structure provides the foundation for modelling columns of ME tape. Initially an isolated column of ME tape was investigated. Grains were considered to be single domain and the dynamic process of the magnetic moments was explored by the Landau-Lifschitz equation. The model demonstrated that as the strength of the exchange coupling parameter increased, then moments which were strongly coupled resisted large negative fields and square hysteresis loops with a high coercivity were produced. Reversal of the moments was observed to be initiated at the ends of a column and then propagated throughout the column. This was attributed to large demagnetising fields and was particularly evident in the model with aligned easy axes. If the easy axes were randomly orientated then more disorder was present in the model and moments rotated incoherently. This produced hysteresis loops that were less square than those of the aligned model. The results also showed how the microstructure influenced the reversal processes

  3. Large eddy simulation of new subgrid scale model for three-dimensional bundle flows

    International Nuclear Information System (INIS)

    Barsamian, H.R.; Hassan, Y.A.

    2004-01-01

    Having led to increased inefficiencies and power plant shutdowns fluid flow induced vibrations within heat exchangers are of great concern due to tube fretting-wear or fatigue failures. Historically, scaling law and measurement accuracy problems were encountered for experimental analysis at considerable effort and expense. However, supercomputers and accurate numerical methods have provided reliable results and substantial decrease in cost. In this investigation Large Eddy Simulation has been successfully used to simulate turbulent flow by the numeric solution of the incompressible, isothermal, single phase Navier-Stokes equations. The eddy viscosity model and a new subgrid scale model have been utilized to model the smaller eddies in the flow domain. A triangular array flow field was considered and numerical simulations were performed in two- and three-dimensional fields, and were compared to experimental findings. Results show good agreement of the numerical findings to that of the experimental, and solutions obtained with the new subgrid scale model represent better energy dissipation for the smaller eddies. (author)

  4. The Acceptance of Exceptionality: A Three Dimensional Model.

    Science.gov (United States)

    Martin, Larry L.; Nivens, Maryruth K.

    A model extrapolates from E. Kubler-Ross' conception of the stages of grief to apply to parent and family reactions when an exceptionality is identified. A chart lists possible parent feelings and reactions, possible school reactions to the parent in grief, and the child's reactions during each of five stages: denial, rage and anger, bargaining,…

  5. Three-Dimensional Models for Teaching Neuroanatomy to Blind Students.

    Science.gov (United States)

    Pietsch, Paul

    1980-01-01

    An audio/tactile course enables blind college students to understand the anatomy of the human brain. Models were designed which allow tactile exploration of the visual fields, retina, optic nerves, and the subdivisions of the tracts and radiations in the brain. (Author/PHR)

  6. Interplay of universality classes in a three-dimensional Yukawa model

    International Nuclear Information System (INIS)

    Focht, E.; Jersak, J.; Paul, J.

    1996-01-01

    We investigate numerically on the lattice the interplay of universality classes of the three-dimensional Yukawa model with U(1) chiral symmetry, using the Binder method of finite size scaling. At zero Yukawa coupling the scaling related to the magnetic Wilson-Fisher fixed point is confirmed. At sufficiently strong Yukawa coupling the dominance of the chiral fixed point associated with the 3D Gross-Neveu model is observed for various values of the coupling parameters, including infinite scalar self-coupling. In both cases the Binder method works consistently in a broad range of lattice sizes. However, when the Yukawa coupling is decreased the finite size behavior gets complicated and the Binder method gives inconsistent results for different lattice sizes. This signals a crossover between the universality classes of the two fixed points. copyright 1996 The American Physical Society

  7. Pushing the limits of Monte Carlo simulations for the three-dimensional Ising model

    Science.gov (United States)

    Ferrenberg, Alan M.; Xu, Jiahao; Landau, David P.

    2018-04-01

    While the three-dimensional Ising model has defied analytic solution, various numerical methods like Monte Carlo, Monte Carlo renormalization group, and series expansion have provided precise information about the phase transition. Using Monte Carlo simulation that employs the Wolff cluster flipping algorithm with both 32-bit and 53-bit random number generators and data analysis with histogram reweighting and quadruple precision arithmetic, we have investigated the critical behavior of the simple cubic Ising Model, with lattice sizes ranging from 163 to 10243. By analyzing data with cross correlations between various thermodynamic quantities obtained from the same data pool, e.g., logarithmic derivatives of magnetization and derivatives of magnetization cumulants, we have obtained the critical inverse temperature Kc=0.221 654 626 (5 ) and the critical exponent of the correlation length ν =0.629 912 (86 ) with precision that exceeds all previous Monte Carlo estimates.

  8. COSMO-PAFOG: Three-dimensional fog forecasting with the high-resolution COSMO-model

    Science.gov (United States)

    Hacker, Maike; Bott, Andreas

    2017-04-01

    The presence of fog can have critical impact on shipping, aviation and road traffic increasing the risk of serious accidents. Besides these negative impacts of fog, in arid regions fog is explored as a supplementary source of water for human settlements. Thus the improvement of fog forecasts holds immense operational value. The aim of this study is the development of an efficient three-dimensional numerical fog forecast model based on a mesoscale weather prediction model for the application in the Namib region. The microphysical parametrization of the one-dimensional fog forecast model PAFOG (PArameterized FOG) is implemented in the three-dimensional nonhydrostatic mesoscale weather prediction model COSMO (COnsortium for Small-scale MOdeling) developed and maintained by the German Meteorological Service. Cloud water droplets are introduced in COSMO as prognostic variables, thus allowing a detailed description of droplet sedimentation. Furthermore, a visibility parametrization depending on the liquid water content and the droplet number concentration is implemented. The resulting fog forecast model COSMO-PAFOG is run with kilometer-scale horizontal resolution. In vertical direction, we use logarithmically equidistant layers with 45 of 80 layers in total located below 2000 m. Model results are compared to satellite observations and synoptic observations of the German Meteorological Service for a domain in the west of Germany, before the model is adapted to the geographical and climatological conditions in the Namib desert. COSMO-PAFOG is able to represent the horizontal structure of fog patches reasonably well. Especially small fog patches typical of radiation fog can be simulated in agreement with observations. Ground observations of temperature are also reproduced. Simulations without the PAFOG microphysics yield unrealistically high liquid water contents. This in turn reduces the radiative cooling of the ground, thus inhibiting nocturnal temperature decrease. The

  9. Three dimensional plastic model of the skull from CT images by using photocurable polymer

    International Nuclear Information System (INIS)

    Goto, Masaaki; Katsuki, Takeshi; Uchida, Yuuki; Ihara, Kouichiro; Noguchi, Nobuhiro

    1992-01-01

    Three dimensional analysis in medicine is increasingly becoming a valuable tool in preoperative planning, educating to students, and explaining to patients. Recently three dimensional reconstruction technology has been coupled with computerized resin hardening processes to create acrylic models from the three dimensional reconstruction data. We have fabricated two anatomical models of the skull by the computer controlled resin hardening device. Three dimensional data were created by the three-dimensional reformation system (TRI). As data entry and storage process, contour of bone tissue is manually drawn from each serial CT photographic image of transverse skull sections. These traces are then input to the frame memory by way of the video camera. The computer stores the X, Y coordinates of points along an outline as it is traced. A depth value into the structure, assigned to each section, provides the Z coordinate, that is, the third dimension. Wire frame image is generated by using the storage data. The final image produced by hidden surface removal and shading is displayed on a full color graphic display monitor. Anatomical resin models were generated by a photo hardening device which is controlled by a minicomputer and three dimensional reconstruction data. He-Cd laser beam (wave length: 325 nm) conducted through the fibers scans the bottom of the monometer liquid surface according to the each CT contour data. The elevator moves up after the polymerization of the liquid has been performed in one slice. This device is suitable for the creation of human anatomical structure because the branched form and hollow model can be made easily. Three dimensional resin models are more useful for simulation surgery, education, and explanation than computer aided three-dimensional images. (author)

  10. Three-fluid, three-dimensional magnetohydrodynamic solar wind model with eddy viscosity and turbulent resistivity

    Energy Technology Data Exchange (ETDEWEB)

    Usmanov, Arcadi V.; Matthaeus, William H. [Department of Physics and Astronomy, University of Delaware, Newark, DE 19716 (United States); Goldstein, Melvyn L., E-mail: arcadi.usmanov@nasa.gov [Code 672, NASA Goddard Space Flight Center, Greenbelt, MD 20771 (United States)

    2014-06-10

    We have developed a three-fluid, three-dimensional magnetohydrodynamic solar wind model that incorporates turbulence transport, eddy viscosity, turbulent resistivity, and turbulent heating. The solar wind plasma is described as a system of co-moving solar wind protons, electrons, and interstellar pickup protons, with separate energy equations for each species. Numerical steady-state solutions of Reynolds-averaged solar wind equations coupled with turbulence transport equations for turbulence energy, cross helicity, and correlation length are obtained by the time relaxation method in the corotating with the Sun frame of reference in the region from 0.3 to 100 AU (but still inside the termination shock). The model equations include the effects of electron heat conduction, Coulomb collisions, photoionization of interstellar hydrogen atoms and their charge exchange with the solar wind protons, turbulence energy generation by pickup protons, and turbulent heating of solar wind protons and electrons. The turbulence transport model is based on the Reynolds decomposition and turbulence phenomenologies that describe the conversion of fluctuation energy into heat due to a turbulent cascade. In addition to using separate energy equations for the solar wind protons and electrons, a significant improvement over our previous work is that the turbulence model now uses an eddy viscosity approximation for the Reynolds stress tensor and the mean turbulent electric field. The approximation allows the turbulence model to account for driving of turbulence by large-scale velocity gradients. Using either a dipole approximation for the solar magnetic field or synoptic solar magnetograms from the Wilcox Solar Observatory for assigning boundary conditions at the coronal base, we apply the model to study the global structure of the solar wind and its three-dimensional properties, including embedded turbulence, heating, and acceleration throughout the heliosphere. The model results are

  11. Resonance phenomena in a time-dependent, three-dimensional model of an idealized eddy

    Science.gov (United States)

    Rypina, I. I.; Pratt, L. J.; Wang, P.; Äe; -zgökmen, T. M.; Mezic, I.

    2015-08-01

    We analyze the geometry of Lagrangian motion and material barriers in a time-dependent, three-dimensional, Ekman-driven, rotating cylinder flow, which serves as an idealization for an isolated oceanic eddy and other overturning cells with cylindrical geometry in the ocean and atmosphere. The flow is forced at the top through an oscillating upper lid, and the response depends on the frequency and amplitude of lid oscillations. In particular, the Lagrangian geometry changes near the resonant tori of the unforced flow, whose frequencies are rationally related to the forcing frequencies. Multi-scale analytical expansions are used to simplify the flow in the vicinity of resonant trajectories and to investigate the resonant flow geometries. The resonance condition and scaling can be motivated by simple physical argument. The theoretically predicted flow geometries near resonant trajectories have then been confirmed through numerical simulations in a phenomenological model and in a full solution of the Navier-Stokes equations.

  12. Three-dimensional Einstein-Klein-Gordon system in characteristic numerical relativity

    International Nuclear Information System (INIS)

    Barreto, W.; Silva, A. da; Lehner, L.; Gomez, R.; Rosales, L.; Winicour, J.

    2005-01-01

    We incorporate a massless scalar field into a three-dimensional code for the characteristic evolution of the gravitational field. The extended three-dimensional code for the Einstein-Klein-Gordon system is calibrated to be second-order convergent. It provides an accurate calculation of the gravitational and scalar radiation at infinity. As an application, we simulate the fully nonlinear evolution of an asymmetric scalar pulse of ingoing radiation propagating toward an interior Schwarzschild black hole and compute the backscattered scalar and gravitational outgoing radiation patterns. The amplitudes of the scalar and gravitational outgoing radiation modes exhibit the predicted power law scaling with respect to the amplitude of the initial data. For the scattering of an axisymmetric scalar field, the final ring down matches the complex frequency calculated perturbatively for the l=2 quasinormal mode

  13. Liquid phase electro epitaxy growth kinetics of GaAs-A three-dimensional numerical simulation study

    International Nuclear Information System (INIS)

    Mouleeswaran, D.; Dhanasekaran, R.

    2006-01-01

    A three-dimensional numerical simulation study for the liquid phase electro epitaxial growth kinetic of GaAs is presented. The kinetic model is constructed considering (i) the diffusive and convective mass transport, (ii) the heat transfer due to thermoelectric effects such as Peltier effect, Joule effect and Thomson effect, (iii) the electric current distribution with electromigration and (iv) the fluid flow coupled with concentration and temperature fields. The simulations are performed for two configurations namely (i) epitaxial growth from the arsenic saturated gallium rich growth solution, i.e., limited solution model and (ii) epitaxial growth from the arsenic saturated gallium rich growth solution with polycrystalline GaAs feed. The governing equations of liquid phase electro epitaxy are solved numerically with appropriate initial and boundary conditions using the central difference method. Simulations are performed to determine the following, a concentration profiles of solute atoms (As) in the Ga-rich growth solution, shape of the substrate evolution, the growth rate of the GaAs epitaxial film, the contributions of Peltier effect and electromigration of solute atoms to the growth with various experimental growth conditions. The growth rate is found to increase with increasing growth temperature and applied current density. The results are discussed in detail

  14. Three-dimensional modelling of the human carotid artery using the lattice Boltzmann method: I. Model and velocity analysis

    Energy Technology Data Exchange (ETDEWEB)

    Boyd, J [Cardiovascular Research Group Physics, University of New England, Armidale, NSW 2351 (Australia); Buick, J M [Department of Mechanical and Design Engineering, University of Portsmouth, Anglesea Building, Anglesea Road, Portsmouth PO1 3DJ (United Kingdom)

    2008-10-21

    Numerical modelling is a powerful tool in the investigation of human blood flow and arterial diseases such as atherosclerosis. It is known that near wall velocity and shear are important in the pathogenesis and progression of atherosclerosis. In this paper results for a simulation of blood flow in a three-dimensional carotid artery geometry using the lattice Boltzmann method are presented. The velocity fields in the body of the fluid are analysed at six times of interest during a physiologically accurate velocity waveform. It is found that the three-dimensional model agrees well with previous literature results for carotid artery flow. Regions of low near wall velocity and circulatory flow are observed near the outer wall of the bifurcation and in the lower regions of the external carotid artery, which are regions that are typically prone to atherosclerosis.

  15. Three-dimensional modelling of the human carotid artery using the lattice Boltzmann method: I. Model and velocity analysis

    International Nuclear Information System (INIS)

    Boyd, J; Buick, J M

    2008-01-01

    Numerical modelling is a powerful tool in the investigation of human blood flow and arterial diseases such as atherosclerosis. It is known that near wall velocity and shear are important in the pathogenesis and progression of atherosclerosis. In this paper results for a simulation of blood flow in a three-dimensional carotid artery geometry using the lattice Boltzmann method are presented. The velocity fields in the body of the fluid are analysed at six times of interest during a physiologically accurate velocity waveform. It is found that the three-dimensional model agrees well with previous literature results for carotid artery flow. Regions of low near wall velocity and circulatory flow are observed near the outer wall of the bifurcation and in the lower regions of the external carotid artery, which are regions that are typically prone to atherosclerosis.

  16. Three-dimensional time-dependent computer modeling of the electrothermal atomizers for analytical spectrometry

    Science.gov (United States)

    Tsivilskiy, I. V.; Nagulin, K. Yu.; Gilmutdinov, A. Kh.

    2016-02-01

    A full three-dimensional nonstationary numerical model of graphite electrothermal atomizers of various types is developed. The model is based on solution of a heat equation within solid walls of the atomizer with a radiative heat transfer and numerical solution of a full set of Navier-Stokes equations with an energy equation for a gas. Governing equations for the behavior of a discrete phase, i.e., atomic particles suspended in a gas (including gas-phase processes of evaporation and condensation), are derived from the formal equations molecular kinetics by numerical solution of the Hertz-Langmuir equation. The following atomizers test the model: a Varian standard heated electrothermal vaporizer (ETV), a Perkin Elmer standard THGA transversely heated graphite tube with integrated platform (THGA), and the original double-stage tube-helix atomizer (DSTHA). The experimental verification of computer calculations is carried out by a method of shadow spectral visualization of the spatial distributions of atomic and molecular vapors in an analytical space of an atomizer.

  17. Three-dimensional modelling of an injection experiment in the anaerobic part of a landfill plume

    DEFF Research Database (Denmark)

    Juul Petersen, Michael; Engesgaard, Peter Knudegaard; Bjerg, Poul Løgstrup

    1998-01-01

    Analytical and numerical three-dimensional (3-D) simulations have been conducted and compared to data obtained from a large-scale (50 m), natural gradient field injection experiment. Eighteen different xenobiotic compounds (i.e. benzene, toluene, o-xylene, naphthalene, 1,1,1-TCA, PCE, and TCE...

  18. QUALITY INSPECTION AND ANALYSIS OF THREE-DIMENSIONAL GEOGRAPHIC INFORMATION MODEL BASED ON OBLIQUE PHOTOGRAMMETRY

    Directory of Open Access Journals (Sweden)

    S. Dong

    2018-04-01

    Full Text Available In order to promote the construction of digital geo-spatial framework in China and accelerate the construction of informatization mapping system, three-dimensional geographic information model emerged. The three-dimensional geographic information model based on oblique photogrammetry technology has higher accuracy, shorter period and lower cost than traditional methods, and can more directly reflect the elevation, position and appearance of the features. At this stage, the technology of producing three-dimensional geographic information models based on oblique photogrammetry technology is rapidly developing. The market demand and model results have been emerged in a large amount, and the related quality inspection needs are also getting larger and larger. Through the study of relevant literature, it is found that there are a lot of researches on the basic principles and technical characteristics of this technology, and relatively few studies on quality inspection and analysis. On the basis of summarizing the basic principle and technical characteristics of oblique photogrammetry technology, this paper introduces the inspection contents and inspection methods of three-dimensional geographic information model based on oblique photogrammetry technology. Combined with the actual inspection work, this paper summarizes the quality problems of three-dimensional geographic information model based on oblique photogrammetry technology, analyzes the causes of the problems and puts forward the quality control measures. It provides technical guidance for the quality inspection of three-dimensional geographic information model data products based on oblique photogrammetry technology in China and provides technical support for the vigorous development of three-dimensional geographic information model based on oblique photogrammetry technology.

  19. Quality Inspection and Analysis of Three-Dimensional Geographic Information Model Based on Oblique Photogrammetry

    Science.gov (United States)

    Dong, S.; Yan, Q.; Xu, Y.; Bai, J.

    2018-04-01

    In order to promote the construction of digital geo-spatial framework in China and accelerate the construction of informatization mapping system, three-dimensional geographic information model emerged. The three-dimensional geographic information model based on oblique photogrammetry technology has higher accuracy, shorter period and lower cost than traditional methods, and can more directly reflect the elevation, position and appearance of the features. At this stage, the technology of producing three-dimensional geographic information models based on oblique photogrammetry technology is rapidly developing. The market demand and model results have been emerged in a large amount, and the related quality inspection needs are also getting larger and larger. Through the study of relevant literature, it is found that there are a lot of researches on the basic principles and technical characteristics of this technology, and relatively few studies on quality inspection and analysis. On the basis of summarizing the basic principle and technical characteristics of oblique photogrammetry technology, this paper introduces the inspection contents and inspection methods of three-dimensional geographic information model based on oblique photogrammetry technology. Combined with the actual inspection work, this paper summarizes the quality problems of three-dimensional geographic information model based on oblique photogrammetry technology, analyzes the causes of the problems and puts forward the quality control measures. It provides technical guidance for the quality inspection of three-dimensional geographic information model data products based on oblique photogrammetry technology in China and provides technical support for the vigorous development of three-dimensional geographic information model based on oblique photogrammetry technology.

  20. Three-dimensional numerical simulation of crown spike due to coupling effect between bubbles and free surface

    International Nuclear Information System (INIS)

    Han Rui; Zhang A-Man; Li Shuai

    2014-01-01

    The motion of gas bubbles beneath a free surface will lead to a spike of fluid on the free surface. The distance of the bubbles to the free surface is the key factor to different phenomena. When the inception distance varies in some range, crown phenomenon would happen after the impact of weak buoyancy bubbles, so this kind of spike is defined as crown spike in the present paper. Based on potential flow theory, a three-dimensional numerical model is established to simulate the motion of the free-surface spike generated by one bubble or a horizontal line of two in-phase bubbles. After the downward jet formed near the end of the collapse phase, the simulation of the free surface is performed to study the crown spike without regard to the toroidal bubble's effect. Calculations about the interaction between one bubble and free surface agree well with the experimental results conducted with a high-speed camera, and relative error is within 15%. Crown spike in both single- and two-bubble cases are simulated numerically. Different features and laws of the motion of crown spike, depending on the bubble-boundary distances and the inter-bubble distances, have been investigated

  1. Generation of three-dimensional prototype models based on cone beam computed tomography

    Energy Technology Data Exchange (ETDEWEB)

    Lambrecht, J.T.; Berndt, D.C.; Zehnder, M. [University of Basel, Department of Oral Surgery, University Hospital for Oral Surgery, Oral Radiology and Oral Medicine, Basel (Switzerland); Schumacher, R. [University of Applied Sciences Northwestern Switzerland, School of Life Sciences, Institute for Medical and Analytical Technologies, Muttenz (Switzerland)

    2009-03-15

    The purpose of this study was to generate three-dimensional models based on digital volumetric data that can be used in basic and advanced education. Four sets of digital volumetric data were established by cone beam computed tomography (CBCT) (Accuitomo, J. Morita, Kyoto, Japan). Datasets were exported as Dicom formats and imported into Mimics and Magic software programs to separate the different tissues such as nerve, tooth and bone. These data were transferred to a Polyjet 3D Printing machine (Eden 330, Object, Israel) to generate the models. Three-dimensional prototype models of certain limited anatomical structures as acquired volumetrically were fabricated. Generating three-dimensional models based on CBCT datasets is possible. Automated routine fabrication of these models, with the given infrastructure, is too time-consuming and therefore too expensive. (orig.)

  2. Generation of three-dimensional prototype models based on cone beam computed tomography

    International Nuclear Information System (INIS)

    Lambrecht, J.T.; Berndt, D.C.; Zehnder, M.; Schumacher, R.

    2009-01-01

    The purpose of this study was to generate three-dimensional models based on digital volumetric data that can be used in basic and advanced education. Four sets of digital volumetric data were established by cone beam computed tomography (CBCT) (Accuitomo, J. Morita, Kyoto, Japan). Datasets were exported as Dicom formats and imported into Mimics and Magic software programs to separate the different tissues such as nerve, tooth and bone. These data were transferred to a Polyjet 3D Printing machine (Eden 330, Object, Israel) to generate the models. Three-dimensional prototype models of certain limited anatomical structures as acquired volumetrically were fabricated. Generating three-dimensional models based on CBCT datasets is possible. Automated routine fabrication of these models, with the given infrastructure, is too time-consuming and therefore too expensive. (orig.)

  3. Numerical analysis of the three-dimensional aerodynamics of a hovering rufous hummingbird ( Selasphorus rufus)

    Science.gov (United States)

    Yang, Songyuan; Zhang, Weiping

    2015-12-01

    Hummingbirds have a unique way of hovering. However, only a few published papers have gone into details of the corresponding three-dimensional vortex structures and transient aerodynamic forces. In order to deepen the understanding in these two realms, this article presents an integrated computational fluid dynamics study on the hovering aerodynamics of a rufous hummingbird. The original morphological and kinematic data came from a former researcher's experiments. We found that conical and stable leading-edge vortices (LEVs) with spanwise flow inside their cores existed on the hovering hummingbird's wing surfaces. When the LEVs and other near-field vortices were all shed into the wake after stroke reversals, periodically shed bilateral vortex rings were formed. In addition, a strong downwash was present throughout the flapping cycle. Time histories of lift and drag were also obtained. Combining the three-dimensional flow field and time history of lift, we believe that high lift mechanisms (i.e., rotational circulation and wake capture) which take place at stroke reversals in insect flight was not evident here. For mean lift throughout a whole cycle, it is calculated to be 3.60 g (104.0 % of the weight support). The downstroke and upstroke provide 64.2 % and 35.8 % of the weight support, respectively.

  4. Three-dimensional modeling of chloroprene rubber surface topography upon composition

    Energy Technology Data Exchange (ETDEWEB)

    Žukienė, Kristina, E-mail: kristina.zukiene@ktu.lt [Department of Clothing and Polymer Products Technology, Kaunas University of Technology, Studentu St. 56, LT-51424 Kaunas (Lithuania); Jankauskaitė, Virginija [Department of Clothing and Polymer Products Technology, Kaunas University of Technology, Studentu St. 56, LT-51424 Kaunas (Lithuania); Petraitienė, Stase [Department of Applied Mathematics, Kaunas University of Technology, Studentu 50, LT-51368 Kaunas (Lithuania)

    2014-02-15

    In this study the effect of polymer blend composition on the surface roughness has been investigated and simulated. Three-dimensional modeling of chloroprene rubber film surface upon piperylene-styrene copolymer content was conducted. The efficiency of various surface roughness modeling methods, including Monte Carlo, surface growth and proposed method, named as parabolas, were compared. The required parameters for modeling were obtained from atomic force microscopy topographical images of polymer films surface. It was shown that experimental and modeled surfaces have the same correlation function. The quantitative comparison of function parameters was made. It was determined that novel parabolas method is suitable for three-dimensional polymer blends surface roughness description.

  5. Development Report on the Idaho National Laboratory Sitewide Three-Dimensional Aquifer Model

    Energy Technology Data Exchange (ETDEWEB)

    Thomas R. Wood; Catherine M. Helm-Clark; Hai Huang; Swen Magnuson; Travis McLing; Brennon Orr; Michael J. Rohe; Mitchell A. Plummer; Robert Podgorney; Erik Whitmore; Michael S. Roddy

    2007-09-01

    A sub-regional scale, three-dimensional flow model of the Snake River Plain Aquifer was developed to support remediation decisions for Waste Area Group 10, Operable Unit 10 08 at the Idaho National Laboratory (INL) Site. This model has been calibrated primarily to water levels and secondarily to groundwater velocities interpreted from stable isotope disequilibrium studies and the movement of anthropogenic contaminants in the aquifer from facilities at the INL. The three-dimensional flow model described in this report is one step in the process of constructing a fully three-dimensional groundwater flow and contaminant transport model as prescribed in the Idaho National Engineering and Environmental Laboratory Operable Unit 10-08 Sitewide Groundwater Model Work Plan. An updated three-dimensional hydrogeologic conceptual model is presented along with the geologic basis for the conceptual model. Sediment-dominated three-dimensional volumes were used to represent the geology and constrain groundwater flow as part of the conceptual model. Hydrological, geochemical, and geological data were summarized and evaluated to infer aquifer behavior. A primary observation from development and evaluation of the conceptual model was that relative to flow on a regional scale, the aquifer can be treated with steady-state conditions. Boundary conditions developed for the three-dimensional flow model are presented along with inverse simulations that estimate parameterization of hydraulic conductivity. Inverse simulations were performed using the pilot-point method to estimate permeability distributions. Thermal modeling at the regional aquifer scale and at the sub-regional scale using the inverted permeabilities is presented to corroborate the results of the flow model. The results from the flow model show good agreement with simulated and observed water levels almost always within 1 meter. Simulated velocities show generally good agreement with some discrepancies in an interpreted low

  6. Creating physically-based three-dimensional microstructures: Bridging phase-field and crystal plasticity models.

    Energy Technology Data Exchange (ETDEWEB)

    Lim, Hojun [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Owen, Steven J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Abdeljawad, Fadi F. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Hanks, Byron [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Battaile, Corbett Chandler [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-09-01

    In order to better incorporate microstructures in continuum scale models, we use a novel finite element (FE) meshing technique to generate three-dimensional polycrystalline aggregates from a phase field grain growth model of grain microstructures. The proposed meshing technique creates hexahedral FE meshes that capture smooth interfaces between adjacent grains. Three dimensional realizations of grain microstructures from the phase field model are used in crystal plasticity-finite element (CP-FE) simulations of polycrystalline a -iron. We show that the interface conformal meshes significantly reduce artificial stress localizations in voxelated meshes that exhibit the so-called "wedding cake" interfaces. This framework provides a direct link between two mesoscale models - phase field and crystal plasticity - and for the first time allows mechanics simulations of polycrystalline materials using three-dimensional hexahedral finite element meshes with realistic topological features.

  7. Numerical Analysis of the Three-Dimensional Nonstationary Flow of Ideal Gas in the Last Stage of Turbine Machine Taking into Consideration the Nonaxisymmetric Exhaust Pipe Branch

    OpenAIRE

    Kolodyazhnaya, Lyubov Vladimirovna; Rzadkowski, Romuald; Gnesin, Vitaly Isaevich

    2016-01-01

    A problem related to the forecast of the aeroelastic behavior and aeroelastic instability of blades (in particular self-oscillations, flutter, and resonance vibrations) becomes of great importance for the development of high-loaded compressor and vent rows and the last turbine stages whose long and flexible blades can be exposed to such phenomena. The solution of this problem requires the development of new models for the nonstationary three-dimensional flow, the use of contemporary numeric m...

  8. Dynamic model of organic pollutant degradation in three dimensional packed bed electrode reactor.

    Science.gov (United States)

    Pang, Tianting; Wang, Yan; Yang, Hui; Wang, Tianlei; Cai, Wangfeng

    2018-04-21

    A dynamic model of semi-batch three-dimensional electrode reactor was established based on the limiting current density, Faraday's law, mass balance and a series of assumptions. Semi-batch experiments of phenol degradation were carried out in a three-dimensional electrode reactor packed with activated carbon under different conditions to verify the model. The factors such as the current density, the electrolyte concentration, the initial pH value, the flow rate of organic and the initial organic concentration were examined to know about the pollutant degradation in the three-dimensional electrode reactor. The various concentrations and logarithm of concentration of phenol with time were compared with the dynamic model. It was shown that the calculated data were in good agreement with experimental data in most cases. Copyright © 2018 Elsevier Ltd. All rights reserved.

  9. Three-Dimensional Computer-Assisted Two-Layer Elastic Models of the Face.

    Science.gov (United States)

    Ueda, Koichi; Shigemura, Yuka; Otsuki, Yuki; Fuse, Asuka; Mitsuno, Daisuke

    2017-11-01

    To make three-dimensional computer-assisted elastic models for the face, we decided on five requirements: (1) an elastic texture like skin and subcutaneous tissue; (2) the ability to take pen marking for incisions; (3) the ability to be cut with a surgical knife; (4) the ability to keep stitches in place for a long time; and (5) a layered structure. After testing many elastic solvents, we have made realistic three-dimensional computer-assisted two-layer elastic models of the face and cleft lip from the computed tomographic and magnetic resonance imaging stereolithographic data. The surface layer is made of polyurethane and the inner layer is silicone. Using this elastic model, we taught residents and young doctors how to make several typical local flaps and to perform cheiloplasty. They could experience realistic simulated surgery and understand three-dimensional movement of the flaps.

  10. Evaluating the effects of modeling errors for isolated finite three-dimensional targets

    Science.gov (United States)

    Henn, Mark-Alexander; Barnes, Bryan M.; Zhou, Hui

    2017-10-01

    Optical three-dimensional (3-D) nanostructure metrology utilizes a model-based metrology approach to determine critical dimensions (CDs) that are well below the inspection wavelength. Our project at the National Institute of Standards and Technology is evaluating how to attain key CD and shape parameters from engineered in-die capable metrology targets. More specifically, the quantities of interest are determined by varying the input parameters for a physical model until the simulations agree with the actual measurements within acceptable error bounds. As in most applications, establishing a reasonable balance between model accuracy and time efficiency is a complicated task. A well-established simplification is to model the intrinsically finite 3-D nanostructures as either periodic or infinite in one direction, reducing the computationally expensive 3-D simulations to usually less complex two-dimensional (2-D) problems. Systematic errors caused by this simplified model can directly influence the fitting of the model to the measurement data and are expected to become more apparent with decreasing lengths of the structures. We identify these effects using selected simulation results and present experimental setups, e.g., illumination numerical apertures and focal ranges, that can increase the validity of the 2-D approach.

  11. Numerical Study of Single Bubble Growth on and Departure from a Horizontal Superheated Wall by Three-dimensional Lattice Boltzmann Method

    Science.gov (United States)

    Feng, Yuan; Li, Hui-Xiong; Guo, Kai-Kai; Zhao, Jian-Fu; Wang, Tai

    2018-05-01

    A three-dimensional hybrid lattice Boltzmann method was used to simulate the progress of a single bubble's growth and departure from a horizontal superheated wall. The evolutionary process of the bubble shapes and also the temperature fields during pool nucleate boiling were obtained and the influence of the gravitational acceleration on the bubble departure diameter (BDD), the bubble release frequency (BRF) and the heat flux on the superheated wall was analyzed. The simulation results obtained by the present three-dimensional numerical studies demonstrate that the BDD is proportional to g^{-0.301}, the BRF is proportional to g^{-0.58}, and the averaged wall heat flux is proportional to g^{0.201}, where g is the gravitational acceleration. These results are in good agreement with the common-used experimental correlations, indicating the rationality of the present numerical model and results.

  12. Three dimensional force prediction in a model linear brushless dc motor

    Energy Technology Data Exchange (ETDEWEB)

    Moghani, J.S.; Eastham, J.F.; Akmese, R.; Hill-Cottingham, R.J. (Univ. of Bath (United Kingdom). School of Electronic and Electric Engineering)

    1994-11-01

    Practical results are presented for the three axes forces produced on the primary of a linear brushless dc machine which is supplied from a three-phase delta-modulated inverter. Conditions of both lateral alignment and lateral displacement are considered. Finite element analysis using both two and three dimensional modeling is compared with the practical results. It is shown that a modified two dimensional model is adequate, where it can be used, in the aligned position and that the full three dimensional method gives good results when the machine is axially misaligned.

  13. Simulations of NLC formation using a microphysical model driven by three-dimensional dynamics

    Science.gov (United States)

    Kirsch, Annekatrin; Becker, Erich; Rapp, Markus; Megner, Linda; Wilms, Henrike

    2014-05-01

    Noctilucent clouds (NLCs) represent an optical phenomenon occurring in the polar summer mesopause region. These clouds have been known since the late 19th century. Current physical understanding of NLCs is based on numerous observational and theoretical studies, in recent years especially observations from satellites and by lidars from ground. Theoretical studies based on numerical models that simulate NLCs with the underlying microphysical processes are uncommon. Up to date no three-dimensional numerical simulations of NLCs exist that take all relevant dynamical scales into account, i.e., from the planetary scale down to gravity waves and turbulence. Rather, modeling is usually restricted to certain flow regimes. In this study we make a more rigorous attempt and simulate NLC formation in the environment of the general circulation of the mesopause region by explicitly including gravity waves motions. For this purpose we couple the Community Aerosol and Radiation Model for Atmosphere (CARMA) to gravity-wave resolving dynamical fields simulated beforehand with the Kuehlungsborn Mechanistic Circulation Model (KMCM). In our case, the KMCM is run with a horizontal resolution of T120 which corresponds to a minimum horizontal wavelength of 350 km. This restriction causes the resolved gravity waves to be somewhat biased to larger scales. The simulated general circulation is dynamically controlled by these waves in a self-consitent fashion and provides realistic temperatures and wind-fields for July conditions. Assuming a water vapor mixing ratio profile in agreement with current observations results in reasonable supersaturations of up to 100. In a first step, CARMA is applied to a horizontal section covering the Northern hemisphere. The vertical resolution is 120 levels ranging from 72 to 101 km. In this paper we will present initial results of this coupled dynamical microphysical model focussing on the interaction of waves and turbulent diffusion with NLC-microphysics.

  14. Three Dimensional Thermal Modeling of Li-Ion Battery Pack Based on Multiphysics and Calorimetric Measurement

    DEFF Research Database (Denmark)

    Khan, Mohammad Rezwan; Kær, Søren Knudsen

    2016-01-01

    A three-dimensional multiphysics-based thermal model of a battery pack is presented. The model is intended to demonstrate the cooling mechanism inside the battery pack. Heat transfer (HT) and computational fluid dynamics (CFD) physics are coupled for both time-dependent and steady-state simulatio...

  15. Three-Dimensional Model Test Study of Xbloc Armoured Breakwaters at Punta Catalina, Dominican Republic

    DEFF Research Database (Denmark)

    Røge, Mads Sønderstrup; Andersen, Thomas Lykke

    The present report presents results from a three-dimensional model test study carried out at Aalborg University in the period June 2015 – August 2015. The objectives of the model tests were to study the stability of the Xbloc armoured breakwaters at Punta Catalina under short-crested wave attack...

  16. Modeling Dispersion of Chemical-Biological Agents in Three Dimensional Living Space

    International Nuclear Information System (INIS)

    William S. Winters

    2002-01-01

    This report documents a series of calculations designed to demonstrate Sandia's capability in modeling the dispersal of chemical and biological agents in complex three-dimensional spaces. The transport of particles representing biological agents is modeled in a single room and in several connected rooms. The influence of particle size, particle weight and injection method are studied

  17. Three-dimensional lattice Boltzmann model for immiscible two-phase flow simulations.

    Science.gov (United States)

    Liu, Haihu; Valocchi, Albert J; Kang, Qinjun

    2012-04-01

    We present an improved three-dimensional 19-velocity lattice Boltzmann model for immisicible binary fluids with variable viscosity and density ratios. This model uses a perturbation step to generate the interfacial tension and a recoloring step to promote phase segregation and maintain surfaces. A generalized perturbation operator is derived using the concept of a continuum surface force together with the constraints of mass and momentum conservation. A theoretical expression for the interfacial tension is determined directly without any additional analysis and assumptions. The recoloring algorithm proposed by Latva-Kokko and Rothman is applied for phase segregation, which minimizes the spurious velocities and removes lattice pinning. This model is first validated against the Laplace law for a stationary bubble. It is found that the interfacial tension is predicted well for density ratios up to 1000. The model is then used to simulate droplet deformation and breakup in simple shear flow. We compute droplet deformation at small capillary numbers in the Stokes regime and find excellent agreement with the theoretical Taylor relation for the segregation parameter β=0.7. In the limit of creeping flow, droplet breakup occurs at a critical capillary number 0.35numerical simulations and experiments. Droplet breakup can also be promoted by increasing the Reynolds number. Finally, we numerically investigate a single bubble rising under buoyancy force in viscous fluids for a wide range of Eötvös and Morton numbers. Numerical results are compared with theoretical predictions and experimental results, and satisfactory agreement is shown.

  18. Three-dimensional model of heat transport during In Situ Vitrification with melting and cool down

    International Nuclear Information System (INIS)

    Hawkes, G.L.

    1993-01-01

    A potential technology for permanent remediation of buried wastes is the In Situ Vitrification (ISV) process. This process uses electrical resistance heating to melt waste and contaminated soil in place to produce a durable, glasslike material that encapsulates and immobilizes buried wastes. The magnitude of the resulting electrical resistance heating is sufficient to cause soil melting. As the molten region grows, surface heat losses cause the soil near the surface to re solidify. This paper presents numerical results obtained by considering heat transport and melting when solving the conservation of mass and energy equations using finite element methods. A local heat source is calculated by solving the electric field equation and calculating a Joule Heat source term. The model considered is a three-dimensional model of the electrodes and surrounding soil. Also included in the model is subsidence; where the surface of the melted soil subsides due to the change in density when the soil melts. A power vs. time profile is implemented for typical ISV experiments. The model agrees well with experimental data for melt volume and melt shape

  19. Three dimensional, numerical analysis of an elasto hydrodynamic lubrication using fluid structure interaction (FSI) approach

    Science.gov (United States)

    Hanoca, P.; Ramakrishna, H. V.

    2018-03-01

    This work is related to develop a methodology to model and simulate the TEHD using the sequential application of CFD and CSD. The FSI analyses are carried out using ANSYS Workbench. In this analysis steady state, 3D Navier-Stoke equations along with energy equation are solved. Liquid properties are introduced where the viscosity and density are the function of pressure and temperature. The cavitation phenomenon is adopted in the analysis. Numerical analysis has been carried at different speeds and surfaces temperatures. During the analysis, it was found that as speed increases, hydrodynamic pressures will also increases. The pressure profile obtained from the Roelands equation is more sensitive to the temperature as compared to the Barus equation. The stress distributions specify the significant positions in the bearing structure. The developed method is capable of giving latest approaching into the physics of elasto hydrodynamic lubrication.

  20. A three-dimensional breakdown model of SOI lateral power transistors with a circular layout

    International Nuclear Information System (INIS)

    Guo Yufeng; Wang Zhigong; Sheu Gene

    2009-01-01

    This paper presents an analytical three-dimensional breakdown model of SOI lateral power devices with a circular layout. The Poisson equation is solved in cylindrical coordinates to obtain the radial surface potential and electric field distributions for both fully- and partially-depleted drift regions. The breakdown voltages for N + N and P + N junctions are derived and employed to investigate the impact of cathode region curvature. A modified RESURF criterion is proposed to provide a design guideline for optimizing the breakdown voltage and doping concentration in the drift region in three dimensional space. The analytical results agree well with MEDICI simulation results and experimental data from earlier publications. (semiconductor devices)

  1. Three-dimensional FDTD Modeling of Earth-ionosphere Cavity Resonances

    Science.gov (United States)

    Yang, H.; Pasko, V. P.

    2003-12-01

    Resonance properties of the earth-ionosphere cavity were first predicted by W. O. Schumann in 1952 [Schumann, Z. Naturforsch. A, 7, 149, 1952]. Since then observations of extremely low frequency (ELF) signals in the frequency range 1-500 Hz have become a powerful tool for monitoring of global lightning activity and planetary scale variability of the lower ionosphere, as well as, in recent years, for location and remote sensing of sprites, jets and elves and associated lightning discharges [e.g., Sato et al., JASTP, 65, 607, 2003; Su et al., Nature, 423, 974, 2003; and references cited therein]. The simplicity and flexibility of finite difference time domain (FDTD) technique for finding first principles solutions of electromagnetic problems in a medium with arbitrary inhomogeneities and ever-increasing computer power make FDTD an excellent candidate to be the technique of the future in development of realistic numerical models of VLF/ELF propagation in Earth-ionosphere waveguide [Cummer, IEEE Trans. Antennas Propagat., 48, 1420, 2000], and several reports about successful application of the FDTD technique for solution of related problems have recently appeared in the literature [e.g., Thevenot et al., Ann. Telecommun., 54, 297, 1999; Cummer, 2000; Berenger, Ann. Telecommun., 57, 1059, 2002, Simpson and Taflove, IEEE Antennas Wireless Propagat. Lett., 1, 53, 2002]. In this talk we will present results from a new three-dimensional spherical FDTD model, which is designed for studies of ELF electromagnetic signals under 100 Hz in the earth-ionosphere cavity. The model accounts for a realistic latitudinal and longitudinal variation of ground conductivity (i.e., for the boundaries between oceans and continents) by employing a broadband surface impedance technique proposed in [Breggs et al., IEEE Trans. Antenna Propagat., 41, 118, 1993]. The realistic distributions of atmospheric/lower ionospheric conductivity are derived from the international reference ionosphere model

  2. A phasor approach analysis of multiphoton FLIM measurements of three-dimensional cell culture models

    Science.gov (United States)

    Lakner, P. H.; Möller, Y.; Olayioye, M. A.; Brucker, S. Y.; Schenke-Layland, K.; Monaghan, M. G.

    2016-03-01

    Fluorescence lifetime imaging microscopy (FLIM) is a useful approach to obtain information regarding the endogenous fluorophores present in biological samples. The concise evaluation of FLIM data requires the use of robust mathematical algorithms. In this study, we developed a user-friendly phasor approach for analyzing FLIM data and applied this method on three-dimensional (3D) Caco-2 models of polarized epithelial luminal cysts in a supporting extracellular matrix environment. These Caco-2 based models were treated with epidermal growth factor (EGF), to stimulate proliferation in order to determine if FLIM could detect such a change in cell behavior. Autofluorescence from nicotinamide adenine dinucleotide (phosphate) (NAD(P)H) in luminal Caco-2 cysts was stimulated by 2-photon laser excitation. Using a phasor approach, the lifetimes of involved fluorophores and their contribution were calculated with fewer initial assumptions when compared to multiexponential decay fitting. The phasor approach simplified FLIM data analysis, making it an interesting tool for non-experts in numerical data analysis. We observed that an increased proliferation stimulated by EGF led to a significant shift in fluorescence lifetime and a significant alteration of the phasor data shape. Our data demonstrates that multiphoton FLIM analysis with the phasor approach is a suitable method for the non-invasive analysis of 3D in vitro cell culture models qualifying this method for monitoring basic cellular features and the effect of external factors.

  3. Three dimensional numeric quench simulation of Super-FRS dipole test coil for FAIR project

    International Nuclear Information System (INIS)

    Wu Wei; Ma Lizhen; He Yuan; Yuan Ping

    2013-01-01

    The prototype of superferric dipoles for Super-FRS of Facility for Antiprotons and Ion Research (FAIR) project was designed, fabricated, and tested in China. To investigate the performance of the superconducting coil, a so-called test coil was fabricated and tested in advance. A 3D model based on ANSYS and OPERA 3D was developed in parallel, not only to check if the design matches the numerical simulation, but also to study more details of quench phenomena. The model simplifies the epoxy impregnated coil into an anisotropic continuum medium. The simulation combines ANSYS solver routines for nonlinear transient thermal analysis, the OPERA 3D for magnetic field evaluation and the ANSYS script language for calculations of Joule heat and differential equations of the protection circuits. The time changes of temperature, voltage and current decay, and quench propagation during quench process were analyzed and illustrated. Finally, the test results of the test coil were demonstrated and compared with the results of simulation. (authors)

  4. Modelling three-dimensional distribution of photosynthetically active radiation in sloping coniferous stands

    International Nuclear Information System (INIS)

    Knyazikhin, Yu.; Kranigk, J.; Miessen, G.; Panfyorov, O.; Vygodskaya, N.; Gravenhorst, G.

    1996-01-01

    Solar irradiance is a major environmental factor governing biological and physiological processes in a vegetation canopy. Solar radiation distribution in a canopy and its effect are three-dimensional in nature. However, most of the radiation models up to now have been one-dimensional. They can be successfully applied to large-scale studies of forest functioning. The one-dimensional modelling technique, however, does not provide adequate interpretation of small scale processes leading to forest growth. In this article we discuss a modelling strategy for the simulation of three-dimensional radiation distribution in a vegetation canopy of a small area (about 0.25–0.3 ha). We demonstrate its realisation to predict the three-dimensional radiative regime of phytosynthetically active radiation in a real coniferous stand located on hilly surroundings. Our model can be used to investigate the influence of different climatic conditions, forest management methods and field sites on the solar energy available for forest growth in small heterogeneous areas. Further, a three-dimensional process-oriented model helps to derive global variables affecting bio-physiological processes in a vegetation canopy shifting from small scale studies of the functioning of forests to regional, continental, and global scale problems. (author)

  5. The Two- and Three-Dimensional Models of the HK-WISC: A Confirmatory Factor Analysis.

    Science.gov (United States)

    Chan, David W.; Lin, Wen-Ying

    1996-01-01

    Confirmatory analyses on the Hong Kong Wechsler Intelligence Scale for Children (HK-WISC) provided support for composite score interpretation based on the two- and three-dimensional models across age levels. Test sample was comprised of 1,100 children, ranging in age from 5 to 15 years at all 11 age levels specified by the HK-WISC. (KW)

  6. Recurrence relations and time evolution in the three-dimensional Sawada model

    International Nuclear Information System (INIS)

    Lee, M.H.; Hong, J.

    1984-01-01

    Time-dependent behavior of the three-dimensional Sawada model is obtained by a method of recurrence relations. Exactly calculated quantities are the time evolution of the density-fluctuation operator and its random force. As an application, their linear coefficients, the relaxation and memory functions are used to obtain certain dynamic quantities, e.g., the mobility

  7. Articular contact in a three-dimensional model of the knee

    NARCIS (Netherlands)

    Blankevoort, L.; Kuiper, J. H.; Huiskes, R.; Grootenboer, H. J.

    1991-01-01

    This study is aimed at the analysis of articular contact in a three-dimensional mathematical model of the human knee-joint. In particular the effect of articular contact on the passive motion characteristics is assessed in relation to experimentally obtained joint kinematics. Two basically different

  8. Exact quantum cross sections for a three dimensional angle dependent model for three body reactions.

    Science.gov (United States)

    Baer, M.; Kouri, D. J.

    1971-01-01

    Exact quantum mechanical reactive cross sections are reported for a three dimensional angle dependent model surface. The surface simulates an atom-heteronuclear diatom system A + BC leading to AB + C where atom B is much heavier than A or C. The molecules BC and AB are taken to be rotating vibrators which can dissociate. Results for two angle dependent potentials are given.

  9. On two-dimensionalization of three-dimensional turbulence in shell models

    DEFF Research Database (Denmark)

    Chakraborty, Sagar; Jensen, Mogens Høgh; Sarkar, A.

    2010-01-01

    Applying a modified version of the Gledzer-Ohkitani-Yamada (GOY) shell model, the signatures of so-called two-dimensionalization effect of three-dimensional incompressible, homogeneous, isotropic fully developed unforced turbulence have been studied and reproduced. Within the framework of shell m......-similar PDFs for longitudinal velocity differences are also presented for the rotating 3D turbulence case....

  10. Fusing range and intensity images for generating dense models of three-dimensional environments

    DEFF Research Database (Denmark)

    Ellekilde, Lars-Peter; Miró, Jaime Valls; Dissanayake., Gamini

    This paper presents a novel strategy for the construction of dense three-dimensional environment models by combining images from a conventional camera and a range imager. Ro- bust data association is ?rst accomplished by exploiting the Scale Invariant Feature Transformation (SIFT) technique...

  11. Magnetic properties of the three-dimensional Ising model with an interface amorphization

    International Nuclear Information System (INIS)

    Benyoussef, A.; El Kenz, A.; Saber, M.

    1993-09-01

    A three-dimensional ferromagnetic Ising model with an interface amorphization is investigated with the use of the effective field theory. Phase diagrams and reduced magnetization curves of interface and bulks are studied. We obtain a number of characteristic behaviour such as the possibility of the reentrant phenomena and a large depression of interface magnetization. (author). 21 refs, 5 figs

  12. Development of a three-dimensional ground-water model of the Hanford Site unconfined aquifer system: FY 1995 status report

    International Nuclear Information System (INIS)

    Wurstner, S.K.; Thorne, P.D.; Chamness, M.A.; Freshley, M.D.; Williams, M.D.

    1995-12-01

    A three-dimensional numerical model of ground-water flow was developed for the uppermost unconfined aquifer at the Hanford Site in south-central Washington. Development of the model is supported by the Hanford Site Ground-Water Surveillance Project, managed by the Pacific Northwest National Laboratory, which is responsible for monitoring the sitewide movement of contaminants in ground water beneath the Hanford Site. Two objectives of the Ground-Water Surveillance Project are to (1) identify and quantify existing, emerging, or potential ground-water quality problems, and (2) assess the potential for contaminants to migrate from the Hanford Site through the ground-water pathway. Numerical models of the ground-water flow system are important tools for estimating future aquifer conditions and predicting the movement of contaminants through ground water. The Ground-Water Surveillance Project has supported development and maintenance of a two-dimensional model of the unconfined aquifer. This report describes upgrade of the two-dimensional model to a three-dimensional model. The numerical model is based on a three-dimensional conceptual model that will be continually refined and updated as additional information becomes available. This report presents a description of the three-dimensional conceptual model of ground-water flow in the unconfined aquifer system and then discusses the cur-rent state of the three-dimensional numerical model

  13. Effective potential of the three-dimensional Ising model: The pseudo-ɛ expansion study

    Science.gov (United States)

    Sokolov, A. I.; Kudlis, A.; Nikitina, M. A.

    2017-08-01

    The ratios R2k of renormalized coupling constants g2k that enter the effective potential and small-field equation of state acquire the universal values at criticality. They are calculated for the three-dimensional scalar λϕ4 field theory (3D Ising model) within the pseudo-ɛ expansion approach. Pseudo-ɛ expansions for the critical values of g6, g8, g10, R6 =g6 / g42, R8 =g8 / g43 and R10 =g10 / g44 originating from the five-loop renormalization group (RG) series are derived. Pseudo-ɛ expansions for the sextic coupling have rapidly diminishing coefficients, so addressing Padé approximants yields proper numerical results. Use of Padé-Borel-Leroy and conformal mapping resummation techniques further improves the accuracy leading to the values R6* = 1.6488 and R6* = 1.6490 which are in a brilliant agreement with the result of advanced lattice calculations. For the octic coupling the numerical structure of the pseudo-ɛ expansions is less favorable. Nevertheless, the conform-Borel resummation gives R8* = 0.868, the number being close to the lattice estimate R8* = 0.871 and compatible with the result of 3D RG analysis R8* = 0.857. Pseudo-ɛ expansions for R10* and g10* are also found to have much smaller coefficients than those of the original RG series. They remain, however, fast growing and big enough to prevent obtaining fair numerical estimates.

  14. An analytic, approximate method for modeling steady, three-dimensional flow to partially penetrating wells

    Science.gov (United States)

    Bakker, Mark

    2001-05-01

    An analytic, approximate solution is derived for the modeling of three-dimensional flow to partially penetrating wells. The solution is written in terms of a correction on the solution for a fully penetrating well and is obtained by dividing the aquifer up, locally, in a number of aquifer layers. The resulting system of differential equations is solved by application of the theory for multiaquifer flow. The presented approach has three major benefits. First, the solution may be applied to any groundwater model that can simulate flow to a fully penetrating well; the solution may be superimposed onto the solution for the fully penetrating well to simulate the local three-dimensional drawdown and flow field. Second, the approach is applicable to isotropic, anisotropic, and stratified aquifers and to both confined and unconfined flow. Third, the solution extends over a small area around the well only; outside this area the three-dimensional effect of the partially penetrating well is negligible, and no correction to the fully penetrating well is needed. A number of comparisons are made to existing three-dimensional, analytic solutions, including radial confined and unconfined flow and a well in a uniform flow field. It is shown that a subdivision in three layers is accurate for many practical cases; very accurate solutions are obtained with more layers.

  15. Three-dimensional dose-response models of risk for radiation injury carcinogenesis

    International Nuclear Information System (INIS)

    Raabe, O.G.

    1988-01-01

    The use of computer graphics in conjunction with three-dimensional models of dose-response relationships for chronic exposure to ionizing radiation dramaticly clarifies the separate and interactive roles of competing risks. The three dimensions are average dose rate, exposure time, and risk. As an example, the functionally injurious and carcinogenic responses after systemic uptake of Ra-226 by beagles, mice and people with consequent alpha particle irradiation of the bone are represented by three-dimensional dose-rate/time/response surfaces that demonstrate the contributions with the passage of time of the competing deleterious responses. These relationships are further evaluated by mathematical stripping with three-dimensional illustrations that graphically show the resultant separate contribution of each effect. Radiation bone injury predominates at high dose rates and bone cancer at intermediate dose rates. Low dose rates result in spontaneous deaths from natural aging, yielding a type of practical threshold for bone cancer induction. Risk assessment is benefited by the insights that become apparent with these three-dimensional models. The improved conceptualization afforded by them contributes to planning and evaluating epidemiological analyses and experimental studies

  16. A three-dimensional pelvic model made with a three-dimensional printer: applications for laparoscopic surgery to treat rectal cancer.

    Science.gov (United States)

    Hamabe, A; Ito, M

    2017-05-01

    To help understand the three-dimensional (3D) spatial relationships among the highly complex structures of the pelvis, we made a novel 3D pelvic model with a 3D printing system. We created two pelvic models including the muscles, vessels, nerves, and urogenital organs; the first based on the pelvic anatomy of a healthy male volunteer and the second on the pelvic anatomy of a female volunteer with rectal cancer. The models clearly demonstrated the complicated spatial relationships between anatomical structures in the pelvis. Surgeons could use these models to improve their spatial understanding of pelvic anatomy, which could consequently improve the safety and efficiency of laparoscopic rectal cancer surgery.

  17. The modulation of galactic cosmic rays as described by a three-dimensional drift model

    International Nuclear Information System (INIS)

    Potgieter, M.S.

    1984-01-01

    An outline of the present state of knowledge about the effect of drift on the modulation of galactic cosmic rays is given. Various observations related to the reversal of the solar magnetic field polarity are discussed. Comprehensive numerical solutions of the steady-state cosmic-ray transport equation in an axially-symmetric three-dimensional heliosphere, including drift are presented. This is an extention of the continuing effort of the past six years to understand the effect and importance of drift on the transport of galactic cosmic rays in the heliosphere. A flat neutral sheet which coincides with the equatorial plane is assumed. A general method of calculating the drift velocity in the neutral sheet including that used previously by other authors is presented. The effect of changing various modulation parameters on the drift solutions are illustrated in detail. The real significance of drift is illustrated by using Gaussian input spectra on the modulation boundary. A carefully selected set of modulation parameters is used to illustrate to what extent a drift model can explain prominent observational features. It is concluded that drift is important in in the process of cosmic-ray transport and must as such be considered in all modulation studies, but that it is not overwhelmingly dominant as previously anticipated

  18. Monte Carlo simulation of the three-state vector Potts model on a three-dimensional random lattice

    International Nuclear Information System (INIS)

    Jianbo Zhang; Heping Ying

    1991-09-01

    We have performed a numerical simulation of the three-state vector Potts model on a three-dimensional random lattice. The averages of energy density, magnetization, specific heat and susceptibility of the system in the N 3 (N=8,10,12) lattices were calculated. The results show that a first order nature of the Z(3) symmetry breaking transition appears, as characterized by a thermal hysterisis in the energy density as well as an abrupt drop of magnetization being sharper and discontinuous with increasing of volume in the cross-over region. The results obtained on the random lattice were consistent with those obtained on the three-dimensional cubic lattice. (author). 12 refs, 4 figs

  19. Towards three-dimensional continuum models of self-consistent along-strike megathrust segmentation

    Science.gov (United States)

    Pranger, Casper; van Dinther, Ylona; May, Dave; Le Pourhiet, Laetitia; Gerya, Taras

    2016-04-01

    into one algorithm. We are working towards presenting the first benchmarked 3D dynamic rupture models as an important step towards seismic cycle modelling of megathrust segmentation in a three-dimensional subduction setting with slow tectonic loading, self consistent fault development, and spontaneous seismicity.

  20. Transparency-enhancing technology allows three-dimensional assessment of gastrointestinal mucosa: A porcine model.

    Science.gov (United States)

    Mizutani, Hiroya; Ono, Satoshi; Ushiku, Tetsuo; Kudo, Yotaro; Ikemura, Masako; Kageyama, Natsuko; Yamamichi, Nobutake; Fujishiro, Mitsuhiro; Someya, Takao; Fukayama, Masashi; Koike, Kazuhiko; Onodera, Hiroshi

    2018-02-01

    Although high-resolution three-dimensional imaging of endoscopically resected gastrointestinal specimens can help elucidating morphological features of gastrointestinal mucosa or tumor, there are no established methods to achieve this without breaking specimens apart. We evaluated the utility of transparency-enhancing technology for three-dimensional assessment of gastrointestinal mucosa in porcine models. Esophagus, stomach, and colon mucosa samples obtained from a sacrificed swine were formalin-fixed and paraffin-embedded, and subsequently deparaffinized for analysis. The samples were fluorescently stained, optically cleared using transparency-enhancing technology: ilLUmination of Cleared organs to IDentify target molecules method (LUCID), and visualized using laser scanning microscopy. After observation, all specimens were paraffin-embedded again and evaluated by conventional histopathological assessment to measure the impact of transparency-enhancing procedures. As a result, microscopic observation revealed horizontal section views of mucosa at deeper levels and enabled the three-dimensional image reconstruction of glandular and vascular structures. Besides, paraffin-embedded specimens after transparency-enhancing procedures were all assessed appropriately by conventional histopathological staining. These results suggest that transparency-enhancing technology may be feasible for clinical application and enable the three-dimensional structural analysis of endoscopic resected specimen non-destructively. Although there remain many limitations or problems to be solved, this promising technology might represent a novel histopathological method for evaluating gastrointestinal cancers. © 2018 Japanese Society of Pathology and John Wiley & Sons Australia, Ltd.

  1. A three-dimensional coupled thermo-hydro-mechanical model for deformable fractured geothermal systems

    DEFF Research Database (Denmark)

    Salimzadeh, Saeed; Paluszny, Adriana; Nick, Hamidreza M.

    2018-01-01

    A fully coupled thermal-hydraulic-mechanical (THM) finite element model is presented for fractured geothermal reservoirs. Fractures are modelled as surface discontinuities within a three-dimensional matrix. Non-isothermal flow through the rock matrix and fractures are defined and coupled to a mec......A fully coupled thermal-hydraulic-mechanical (THM) finite element model is presented for fractured geothermal reservoirs. Fractures are modelled as surface discontinuities within a three-dimensional matrix. Non-isothermal flow through the rock matrix and fractures are defined and coupled....... The model has been validated against several analytical solutions, and applied to study the effects of the deformable fractures on the injection of cold water in fractured geothermal systems. Results show that the creation of flow channelling due to the thermal volumetric contraction of the rock matrix...

  2. Finite element analysis of three dimensional crack growth by the use of a boundary element sub model

    DEFF Research Database (Denmark)

    Lucht, Tore

    2009-01-01

    A new automated method to model non-planar three dimensional crack growth is proposed which combines the advantages of both the boundary element method and the finite element method. The proposed method links the two methods by a submodelling strategy in which the solution of a global finite...... element model containing an approximation of the crack is interpolated to a much smaller boundary element model containing a fine discretization of the real crack. The method is validated through several numerical comparisons and by comparison to crack growth measured in a test specimen for an engineering...

  3. [Three dimensional finite element model of a modified posterior cervical single open-door laminoplasty].

    Science.gov (United States)

    Wang, Q; Yang, Y; Fei, Q; Li, D; Li, J J; Meng, H; Su, N; Fan, Z H; Wang, B Q

    2017-06-06

    Objective: To build a three-dimensional finite element models of a modified posterior cervical single open-door laminoplasty with short-segmental lateral mass screws fusion. Methods: The C(2)-C(7) segmental data were obtained from computed tomography (CT) scans of a male patient with cervical spondylotic myelopathy and spinal stenosis.Three-dimensional finite element models of a modified cervical single open-door laminoplasty (before and after surgery) were constructed by the combination of software package MIMICS, Geomagic and ABAQUS.The models were composed of bony vertebrae, articulating facets, intervertebral disc and associated ligaments.The loads of moments 1.5Nm at different directions (flexion, extension, lateral bending and axial rotation)were applied at preoperative model to calculate intersegmental ranges of motion.The results were compared with the previous studies to verify the validation of the models. Results: Three-dimensional finite element models of the modified cervical single open- door laminoplasty had 102258 elements (preoperative model) and 161 892 elements (postoperative model) respectively, including C(2-7) six bony vertebraes, C(2-3)-C(6-7) five intervertebral disc, main ligaments and lateral mass screws.The intersegmental responses at the preoperative model under the loads of moments 1.5 Nm at different directions were similar to the previous published data. Conclusion: Three-dimensional finite element models of the modified cervical single open- door laminoplasty were successfully established and had a good biological fidelity, which can be used for further study.

  4. Three-dimensional thermal finite element modeling of lithium-ion battery in thermal abuse application

    Science.gov (United States)

    Guo, Guifang; Long, Bo; Cheng, Bo; Zhou, Shiqiong; Xu, Peng; Cao, Binggang

    In order to better understand the thermal abuse behavior of high capacities and large power lithium-ion batteries for electric vehicle application, a three-dimensional thermal model has been developed for analyzing the temperature distribution under abuse conditions. The model takes into account the effects of heat generation, internal conduction and convection, and external heat dissipation to predict the temperature distribution in a battery. Three-dimensional model also considers the geometrical features to simulate oven test, which are significant in larger cells for electric vehicle application. The model predictions are compared to oven test results for VLP 50/62/100S-Fe (3.2 V/55 Ah) LiFePO 4/graphite cells and shown to be in great agreement.

  5. Numerical Three-Dimensional Model of Airport Terminal Drainage System

    OpenAIRE

    Strzelecki Michał

    2014-01-01

    During the construction of an airport terminal it was found that as a result of the hydrostatic pressure of underground water the foundation plate of the building had dangerously shifted in the direction opposite to that of the gravitational forces. The only effective measure was to introduce a drainage system on the site. The complex geology of the area indicated that two independent drainage systems, i.e., a horizontal system in the Quaternary beds and a vertical system in the Tertiary wate...

  6. Three-dimensional plasma equilibrium model based on the poloidal representation of the magnetic field

    International Nuclear Information System (INIS)

    Gruber, R.; Degtyarev, L.M.; Kuper, A.; Martynov, A.A.; Medvedev, S.Yu.; Shafranov, V.D.

    1996-01-01

    Equations for the three-dimensional equilibrium of a plasma are formulated in the poloidal representation. The magnetic field is expressed in terms of the poloidal magnetic flux Ψ and the poloidal electric current F. As a result, three-dimensional equilibrium configurations are analyzed with the help of a set of equations including the elliptical equation for the poloidal flux, the magnetic differential equation for the parallel current, and the equations for the basis vector field b. To overcome the difficulties associated with peculiarities that can arise in solving the magnetic differential equation at rational toroidal magnetic surfaces, small regulating corrections are introduced into the proposed set of equations. In this case, second-order differential terms with a small parameter appear in the magnetic differential equations. As a result, these equations take the form of elliptical equations. Three versions of regulating corrections are proposed. The equations obtained can be used to develop numerical codes for calculating three-dimensional equilibrium plasma configurations with an island structure

  7. A computational model for three-dimensional jointed media with a single joint set

    International Nuclear Information System (INIS)

    Koteras, J.R.

    1994-02-01

    This report describes a three-dimensional model for jointed rock or other media with a single set of joints. The joint set consists of evenly spaced joint planes. The normal joint response is nonlinear elastic and is based on a rational polynomial. Joint shear stress is treated as being linear elastic in the shear stress versus slip displacement before attaining a critical stress level governed by a Mohr-Coulomb faction criterion. The three-dimensional model represents an extension of a two-dimensional, multi-joint model that has been in use for several years. Although most of the concepts in the two-dimensional model translate in a straightforward manner to three dimensions, the concept of slip on the joint planes becomes more complex in three dimensions. While slip in two dimensions can be treated as a scalar quantity, it must be treated as a vector in the joint plane in three dimensions. For the three-dimensional model proposed here, the slip direction is assumed to be the direction of maximum principal strain in the joint plane. Five test problems are presented to verify the correctness of the computational implementation of the model

  8. Application of data mining in three-dimensional space time reactor model

    International Nuclear Information System (INIS)

    Jiang Botao; Zhao Fuyu

    2011-01-01

    A high-fidelity three-dimensional space time nodal method has been developed to simulate the dynamics of the reactor core for real time simulation. This three-dimensional reactor core mathematical model can be composed of six sub-models, neutron kinetics model, cay heat model, fuel conduction model, thermal hydraulics model, lower plenum model, and core flow distribution model. During simulation of each sub-model some operation data will be produced and lots of valuable, important information reflecting the reactor core operation status could be hidden in, so how to discovery these information becomes the primary mission people concern. Under this background, data mining (DM) is just created and developed to solve this problem, no matter what engineering aspects or business fields. Generally speaking, data mining is a process of finding some useful and interested information from huge data pool. Support Vector Machine (SVM) is a new technique of data mining appeared in recent years, and SVR is a transformed method of SVM which is applied in regression cases. This paper presents only two significant sub-models of three-dimensional reactor core mathematical model, the nodal space time neutron kinetics model and the thermal hydraulics model, based on which the neutron flux and enthalpy distributions of the core are obtained by solving the three-dimensional nodal space time kinetics equations and energy equations for both single and two-phase flows respectively. Moreover, it describes that the three-dimensional reactor core model can also be used to calculate and determine the reactivity effects of the moderator temperature, boron concentration, fuel temperature, coolant void, xenon worth, samarium worth, control element positions (CEAs) and core burnup status. Besides these, the main mathematic theory of SVR is introduced briefly next, on the basis of which SVR is applied to dealing with the data generated by two sample calculation, rod ejection transient and axial

  9. A numerical study of three-dimensional bubble merger in the Rayleigh endash Taylor instability

    International Nuclear Information System (INIS)

    Li, X.L.

    1996-01-01

    The Rayleigh endash Taylor instability arises when a heavy fluid adjacent to a light fluid is accelerated in a direction against the density gradient. Under this unstable configuration, a perturbation mode of small amplitude grows into bubbles of the light fluid and spikes of the heavy fluid. Taylor discovered the steady state motion with constant velocity for a single bubble or periodic bubbles in the Rayleigh endash Taylor instability. Read and Youngs studied the motion of a randomly perturbed fluid interface in the Rayleigh endash Taylor instability. They reported constant acceleration for the overall bubble envelope. Bubble merger is believed to cause the transition from constant velocity to constant acceleration. In this paper, we present a numerical study of this important physical phenomenon. It analyzes the physical process of bubble merger and the relationship between the horizontal bubble expansion and the vertical interface acceleration. A dynamic bubble velocity, beyond Taylor close-quote s steady state value, is observed during the merger process. It is believed that this velocity is due to the superposition of the bubble velocity with a secondary subharmonic unstable mode. The numerical results are compared with experiments. copyright 1996 American Institute of Physics

  10. Design of a three-dimensional site-scale model for the unsaturated zone at Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Wittwer, C.S.; Bodvarsson, G.S.; Chornack, M.P.; Flint, A.L.; Lewis, B.D.; Spengler, R.W.; Flint, L.E.; Rautman, C.A.

    1992-01-01

    A three-dimensional model of moisture flow within the unsaturated zone at Yucca Mountain is being developed. This site-scale model covers an area of about 30 km 2 and is bounded by major faults to the east and west. A detailed numerical grid has been developed based on location of boreholes, different infiltration zones, hydrogeological units and their outcrops, major faults, and water level data. Different maps, such as contour maps and isopachs maps, are presented for the different infiltration zones, and for the base of the Tiva Canyon, the Paintbrush, and the Topopah Spring hydrogeological units

  11. Variational formulation and stability analysis of a three dimensional superelastic model for shape memory alloys

    Science.gov (United States)

    Alessi, Roberto; Pham, Kim

    2016-02-01

    This paper presents a variational framework for the three-dimensional macroscopic modelling of superelastic shape memory alloys in an isothermal setting. Phase transformation is accounted through a unique second order tensorial internal variable, acting as the transformation strain. Postulating the total strain energy density as the sum of a free energy and a dissipated energy, the model depends on two material scalar functions of the norm of the transformation strain and a material scalar constant. Appropriate calibration of these material functions allows to render a wide range of constitutive behaviours including stress-softening and stress-hardening. The quasi-static evolution problem of a domain is formulated in terms of two physical principles based on the total energy of the system: a stability criterion, which selects the local minima of the total energy, and an energy balance condition, which ensures the consistency of the evolution of the total energy with respect to the external loadings. The local phase transformation laws in terms of Kuhn-Tucker relations are deduced from the first-order stability condition and the energy balance condition. The response of the model is illustrated with a numerical traction-torsion test performed on a thin-walled cylinder. Evolutions of homogeneous states are given for proportional and non-proportional loadings. Influence of the stress-hardening/softening properties on the evolution of the transformation domain is emphasized. Finally, in view of an identification process, the issue of stability of homogeneous states in a multi-dimensional setting is answered based on the study of second-order derivative of the total energy. Explicit necessary and sufficient conditions of stability are provided.

  12. Fast three-dimensional core optimization based on modified one-group model

    Energy Technology Data Exchange (ETDEWEB)

    Freire, Fernando S. [ELETROBRAS Termonuclear S.A. - ELETRONUCLEAR, Rio de Janeiro, RJ (Brazil). Dept. GCN-T], e-mail: freire@eletronuclear.gov.br; Martinez, Aquilino S.; Silva, Fernando C. da [Coordenacao dos Programas de Pos-graduacao de Engenharia (COPPE/UFRJ), Rio de Janeiro, RJ (Brazil). Programa de Engenharia Nuclear], e-mail: aquilino@con.ufrj.br, e-mail: fernando@con.ufrj.br

    2009-07-01

    The optimization of any nuclear reactor core is an extremely complex process that consumes a large amount of computer time. Fortunately, the nuclear designer can rely on a variety of methodologies able to approximate the analysis of each available core loading pattern. Two-dimensional codes are usually used to analyze the loading scheme. However, when particular axial effects are present in the core, two-dimensional analysis cannot produce good results and three-dimensional analysis can be required at all time. Basically, in this paper are presented the major advantages that can be found when one use the modified one-group diffusion theory coupled with a buckling correction model in optimization process. The results of the proposed model are very accurate when compared to benchmark results obtained from detailed calculations using three-dimensional nodal codes (author)

  13. Fast three-dimensional core optimization based on modified one-group model

    International Nuclear Information System (INIS)

    Freire, Fernando S.; Martinez, Aquilino S.; Silva, Fernando C. da

    2009-01-01

    The optimization of any nuclear reactor core is an extremely complex process that consumes a large amount of computer time. Fortunately, the nuclear designer can rely on a variety of methodologies able to approximate the analysis of each available core loading pattern. Two-dimensional codes are usually used to analyze the loading scheme. However, when particular axial effects are present in the core, two-dimensional analysis cannot produce good results and three-dimensional analysis can be required at all time. Basically, in this paper are presented the major advantages that can be found when one use the modified one-group diffusion theory coupled with a buckling correction model in optimization process. The results of the proposed model are very accurate when compared to benchmark results obtained from detailed calculations using three-dimensional nodal codes (author)

  14. Three-dimensional modelling of a dc non-transferred arc plasma torch

    International Nuclear Information System (INIS)

    Li Heping; Chen Xi

    2001-01-01

    Three-dimensional (3D) modelling results are presented concerning a direct current (dc) non-transferred arc plasma torch with axisymmetrical geometrical configuration and axisymmetrical boundary conditions. It is shown that the arc is locally attached at the anode surface of the plasma torch, and the heat transfer and plasma flow within the torch are of 3D features. The predicted arc root location at the anode surface and arc voltage of the torch are very consistent with corresponding experimental results. (author)

  15. Virtual reality publication of spiral ct-derived three-dimensional models: or, creation of spiral, CT-derived, three-dimensional VRML objects.

    Science.gov (United States)

    Tyszka, J M

    1997-01-01

    Three-dimensional models can be generated from slice images, such as those obtained from computed tomography (CT) and magnetic resonance imaging (MRI) using a variety of techniques. A popular method for rendering 3D anatomical models is the creation of polygonal mesh surfaces representing the boundary between tissues. Mesh surfaces can be rendered extremely quickly using conventional personal computers, without recourse to more expensive graphic workstations. The dissemination of three-dimensional (3D) models across the Internet has been made significantly easier by the definition of the Virtual Reality Markup Language (VRML) format. The VRML definition allows the parameters and relationships of 3D objects to be described in a text format. The text file can be transfered from a host computer to a remote client computer through the World Wide Web and viewed using readily available software (See Appendix). VRML is based on the definition of primitive 3D objects such as polygons and spheres. Consequently, the transition from a mesh surface derived from a clinical image data set to a VRML object is relatively simple, allowing for convenient and cost-effective dissemination of 3D clinical models across the internet.

  16. The Three-Dimensional (3D) Numerical Stability Analysis of Hyttemalmen Open-Pit

    Science.gov (United States)

    Cała, Marek; Kowalski, Michał; Stopkowicz, Agnieszka

    2014-10-01

    The purpose of this paper was to perform the 3D numerical calculations allowing slope stability analysis of Hyttemalmen open pit (location Kirkenes, Finnmark Province, Norway). After a ramp rock slide, which took place in December 2010, as well as some other small-scale rock slope stability problems, it proved necessary to perform a serious stability analyses. The Hyttemalmen open pit was designed with a depth up to 100 m, a bench height of 24 m and a ramp width of 10 m. The rock formation in the iron mining district of Kirkenes is called the Bjornevaten Group. This is the most structurally complicated area connected with tectonic process such as folding, faults and metamorphosis. The Bjornevaten Group is a volcano-sedimentary sequence. Rock slope stability depends on the mechanical properties of the rock, hydro-geological conditions, slope topography, joint set systems and seismic activity. However, rock slope stability is mainly connected with joint sets. Joints, or general discontinuities, are regarded as weak planes within rock which have strength reducing consequences with regard to rock strength. Discontinuities within the rock mass lead to very low tensile strength. Several simulations were performed utilising the RocLab (2007) software to estimate the gneiss cohesion for slopes of different height. The RocLab code is dedicated to estimate rock mass strength using the Hoek-Brown failure criterion. Utilising both the GSI index and the Hoek-Brown strength criterion the equivalent Mohr-Coulomb parameters (cohesion and angle of internal friction) can be calculated. The results of 3D numerical calculations (with FLA3D code) show that it is necessary to redesign the slope-bench system in the Hyttemalmen open pit. Changing slope inclination for lower stages is recommended. The minimum factor of safety should be equal 1.3. At the final planned stage of excavation, the factor of safety drops to 1.06 with failure surface ranging through all of the slopes. In the case

  17. Preliminary three-dimensional model of mantle convection with deformable, mobile continental lithosphere

    Science.gov (United States)

    Yoshida, Masaki

    2010-06-01

    Characteristic tectonic structures such as young orogenic belts and suture zones in a continent are expected to be mechanically weaker than the stable part of the continental lithosphere with the cratonic root (or cratonic lithosphere) and yield lateral viscosity variations in the continental lithosphere. In the present-day Earth's lithosphere, the pre-existing, mechanically weak zones emerge as a diffuse plate boundary. However, the dynamic role of a weak (low-viscosity) continental margin (WCM) in the stability of continental lithosphere has not been understood in terms of geophysics. Here, a new numerical simulation model of mantle convection with a compositionally and rheologically heterogeneous, deformable, mobile continental lithosphere is presented for the first time by using three-dimensional regional spherical-shell geometry. A compositionally buoyant and highly viscous continental assemblage with pre-existing WCMs, analogous to the past supercontinent, is modeled and imposed on well-developed mantle convection whose vigor of convection, internal heating rate, and rheological parameters are appropriate for the Earth's mantle. The visco-plastic oceanic lithosphere and the associated subduction of oceanic plates are incorporated. The time integration of the advection of continental materials with zero chemical diffusion is performed by a tracer particle method. The time evolution of mantle convection after setting the model supercontinent is followed over 800 Myr. Earth-like continental drift is successfully reproduced, and the characteristic thermal interaction between the mantle and the continent/supercontinent is observed in my new numerical model. Results reveal that the WCM protects the cratonic lithosphere from being stretched by the convecting mantle and may play a significant role in the stability of the cratonic lithosphere during the geological timescale because it acts as a buffer that prevents the cratonic lithosphere from undergoing global

  18. A Numerical Theory for Impedance Education in Three-Dimensional Normal Incidence Tubes

    Science.gov (United States)

    Watson, Willie R.; Jones, Michael G.

    2016-01-01

    A method for educing the locally-reacting acoustic impedance of a test sample mounted in a 3-D normal incidence impedance tube is presented and validated. The unique feature of the method is that the excitation frequency (or duct geometry) may be such that high-order duct modes may exist. The method educes the impedance, iteratively, by minimizing an objective function consisting of the difference between the measured and numerically computed acoustic pressure at preselected measurement points in the duct. The method is validated on planar and high-order mode sources with data synthesized from exact mode theory. These data are then subjected to random jitter to simulate the effects of measurement uncertainties on the educed impedance spectrum. The primary conclusions of the study are 1) Without random jitter the method is in excellent agreement with that for known impedance samples, and 2) Random jitter that is compatible to that found in a typical experiment has minimal impact on the accuracy of the educed impedance.

  19. HOMOLOGY MODELING AND FUNCTIONAL CHARACTERIZATION OF THREE-DIMENSIONAL STRUCTURE OF DAHP SYNTHASE FROM BRACHYPODIUM DISTACHYON

    Directory of Open Access Journals (Sweden)

    Aditya Dev

    2013-06-01

    Full Text Available The Shikimate pathway is an attractive target for herbicides and antimicrobial agents because it is essential in microbes and plants but absent in animals. The 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (DAHPS is the first enzyme of this pathway, which is involved in the condensation of phosphoenolpyruvate (PEP and D-erythrose 4-phosphate (E4P to produce 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP. DAHPS enzymes have been divided into two types, class I and class II, based on their primary amino acid sequence and three dimensional structures. The plant DAHPS belongs to class II and is regulated differently than DAHPS from microorganisms. To understand the structural basis of such differences in DAHPS from plants and its catalytic mechanism, we have used sequence analysis, homology modeling and docking approach to generate the three dimensional models of DAHP synthase from Brachypodium distachyon (Bd-DAHPS complexed with substrate PEP for the first time. The three dimensional models of Bd-DAHPS provides a detailed knowledge of the active site and the important secondary structural regions that play significant roles in the regulatory mechanism and further may be helpful for design of specific inhibitors towards herbicide development.

  20. A fast apparent horizon finder for three-dimensional Cartesian grids in numerical relativity

    Energy Technology Data Exchange (ETDEWEB)

    Thornburg, Jonathan [Max-Planck-Institut fuer Gravitationsphysik, Albert-Einstein-Institut, Am Muehlenberg 1, D-14476 Golm (Germany)

    2004-01-21

    In 3 + 1 numerical simulations of dynamic black-hole spacetimes, it is useful to be able to find the apparent horizon(s) (AH) in each slice of a time evolution. A number of AH finders are available, but they often take many minutes to run, so they are too slow to be practically usable at each time step. Here I present a new AH finder, AHFINDERDIRECT, which is very fast and accurate: at typical resolutions it takes only a few seconds to find an AH {approx} 10{sup -5}m accuracy on a GHz-class processor. I assume that an AH to be searched for is a Strahlkoerper ('star-shaped region') with respect to some local origin, and so parametrize the AH shape by r = h(angle) for some single-valued function h:S{sup 2} {yields} R{sup 2}. The AH equation then becomes a nonlinear elliptic PDE in h on S{sup 2}, whose coefficients are algebraic functions of g{sub ij}, K{sub ij}, and the Cartesian-coordinate spatial derivatives of g{sub ij}. I discretize S{sup 2} using six angular patches (one each in the neighbourhood of the {+-}x, {+-} y, and {+-}z axes) to avoid coordinate singularities, and finite difference the AH equation in the angular coordinates using fourth-order finite differencing. I solve the resulting system of nonlinear algebraic equations (for h at the angular grid points) by Newton's method, using a 'symbolic differentiation' technique to compute the Jacobian matrix. AHFINDERDIRECT is implemented as a thorn in the CACTUS computational toolkit, and is freely available by anonymous CVS checkout.

  1. Three Dimensional Explicit Model for Cometary Tail Ions Interactions with Solar Wind

    Science.gov (United States)

    Al Bermani, M. J. F.; Alhamed, S. A.; Khalaf, S. Z.; Ali, H. Sh.; Selman, A. A.

    2009-06-01

    The different interactions between cometary tail and solar wind ions are studied in the present paper based on three-dimensional Lax explicit method. The model used in this research is based on the continuity equations describing the cometary tail-solar wind interactions. Three dimensional system was considered in this paper. Simulation of the physical system was achieved using computer code written using Matlab 7.0. The parameters studied here assumed Halley comet type and include the particle density rho, the particles velocity v, the magnetic field strength B, dynamic pressure p and internal energy E. The results of the present research showed that the interaction near the cometary nucleus is mainly affected by the new ions added to the plasma of the solar wind, which increases the average molecular weight and result in many unique characteristics of the cometary tail. These characteristics were explained in the presence of the IMF.

  2. A Novel Deployment Scheme Based on Three-Dimensional Coverage Model for Wireless Sensor Networks

    Science.gov (United States)

    Xiao, Fu; Yang, Yang; Wang, Ruchuan; Sun, Lijuan

    2014-01-01

    Coverage pattern and deployment strategy are directly related to the optimum allocation of limited resources for wireless sensor networks, such as energy of nodes, communication bandwidth, and computing power, and quality improvement is largely determined by these for wireless sensor networks. A three-dimensional coverage pattern and deployment scheme are proposed in this paper. Firstly, by analyzing the regular polyhedron models in three-dimensional scene, a coverage pattern based on cuboids is proposed, and then relationship between coverage and sensor nodes' radius is deduced; also the minimum number of sensor nodes to maintain network area's full coverage is calculated. At last, sensor nodes are deployed according to the coverage pattern after the monitor area is subdivided into finite 3D grid. Experimental results show that, compared with traditional random method, sensor nodes number is reduced effectively while coverage rate of monitor area is ensured using our coverage pattern and deterministic deployment scheme. PMID:25045747

  3. Three-Dimensional Numerical Evaluation of Thermal Performance of Uninsulated Wall Assemblies

    Energy Technology Data Exchange (ETDEWEB)

    Ridouane, El Hassan [National Renewable Energy Lab. (NREL), Golden, CO (United States); Bianchi, Marcus V.A. [National Renewable Energy Lab. (NREL), Golden, CO (United States)

    2011-11-01

    This study describes a detailed 3D computational fluid dynamics model that evaluates the thermal performance of uninsulated wall assemblies. It accounts for conduction through framing, convection, and radiation and allows for material property variations with temperature. This research was presented at the ASME 2011 International Mechanical Engineering Congress and Exhibition; Denver, Colorado; November 11-17, 2011

  4. Three dimensional global modeling of atmospheric CO2. Final technical report

    International Nuclear Information System (INIS)

    Fung, I.; Hansen, J.; Rind, D.

    1983-01-01

    A modeling effort has been initiated to study the prospects of extracting information on carbon dioxide sources and sinks from observed CO 2 variations. The approach uses a three-dimensional global transport model, based on winds from a 3-D general circulation model (GCM), to advect CO 2 noninteractively, i.e., as a tracer, with specified sources and sinks of CO 2 at the surface. This report identifies the 3-D model employed in this study and discusses biosphere, ocean and fossil fuel sources and sinks. Some preliminary model results are presented. 14 figures

  5. Comparison of three-dimensional ocean general circulation models on a benchmark problem

    International Nuclear Information System (INIS)

    Chartier, M.

    1990-12-01

    A french and an american Ocean General Circulation Models for deep-sea disposal of radioactive wastes are compared on a benchmark test problem. Both models are three-dimensional. They solve the hydrostatic primitive equations of the ocean with two different finite difference techniques. Results show that the dynamics simulated by both models are consistent. Several methods for the running of a model from a known state are tested in the French model: the diagnostic method, the prognostic method, the acceleration of convergence and the robust-diagnostic method

  6. Integration of a Three-Dimensional Process-Based Hydrological Model into the Object Modeling System

    Directory of Open Access Journals (Sweden)

    Giuseppe Formetta

    2016-01-01

    Full Text Available The integration of a spatial process model into an environmental modeling framework can enhance the model’s capabilities. This paper describes a general methodology for integrating environmental models into the Object Modeling System (OMS regardless of the model’s complexity, the programming language, and the operating system used. We present the integration of the GEOtop model into the OMS version 3.0 and illustrate its application in a small watershed. OMS is an environmental modeling framework that facilitates model development, calibration, evaluation, and maintenance. It provides innovative techniques in software design such as multithreading, implicit parallelism, calibration and sensitivity analysis algorithms, and cloud-services. GEOtop is a physically based, spatially distributed rainfall-runoff model that performs three-dimensional finite volume calculations of water and energy budgets. Executing GEOtop as an OMS model component allows it to: (1 interact directly with the open-source geographical information system (GIS uDig-JGrass to access geo-processing, visualization, and other modeling components; and (2 use OMS components for automatic calibration, sensitivity analysis, or meteorological data interpolation. A case study of the model in a semi-arid agricultural catchment is presented for illustration and proof-of-concept. Simulated soil water content and soil temperature results are compared with measured data, and model performance is evaluated using goodness-of-fit indices. This study serves as a template for future integration of process models into OMS.

  7. Numerical Study of Three Dimensional Effects in Longitudinal Space-Charge Impedance

    Energy Technology Data Exchange (ETDEWEB)

    Halavanau, A. [NICADD, DeKalb; Piot, P. [NICADD, DeKalb

    2015-06-01

    Longitudinal space-charge (LSC) effects are generally considered as detrimental in free-electron lasers as they can seed instabilities. Such “microbunching instabilities” were recently shown to be potentially useful to support the generation of broadband coherent radiation pulses [1, 2]. Therefore there has been an increasing interest in devising accelerator beamlines capable of sustaining this LSC instability as a mechanism to produce a coherent light source. To date most of these studies have been carried out with a one-dimensional impedance model for the LSC. In this paper we use a N-body “Barnes-Hut” algorithm [3] to simulate the 3D space charge force in the beam combined with elegant [4] and explore the limitation of the 1D model often used

  8. Measuring and modeling of a three-dimensional tracer transport in a planted soil column

    Science.gov (United States)

    Schroeder, N.; Javaux, M.; Haber-Pohlmeier, S.; Pohlmeier, A. J.; Huber, K.; Vereecken, H.; Vanderborght, J.

    2013-12-01

    Water flow from soil to root is driven by the plant transpiration and an important component of the hydrological cycle. The model R-SWMS combines three-dimensional (3D) water flow and solute transport in soil with a detailed description of root structure in three dimensions [1,2]. This model offers the possibility to calculate root water and solute uptake and flow within the roots, which enables explicit studies with respect to the distribution of water and solutes around the roots as well as local processes at the root-soil interface. In this study, we compared measured data from a tracer experiment using Magnetic Resonance Imaging (MRI) with simulations in order to assess the distribution and magnitude of the water uptake of a young lupine plant. An aqueous solution of the Gadolinium-complex (Gd-DTPA2-) was chosen as a tracer, as it behaves conservatively and is ideally suited for MRI. Water flow in the soil towards the roots can thus be visualized by following the change in tracer concentrations over time. The data were obtained by MRI, providing high resolution 3D images of the tracer distribution and root architecture structures by using a spin echo pulse sequence, which is strongly T1- weighted to be tracer sensitive [3], and T2 -weighted for root imaging [4]. This experimental setup was simulated using the 3D high-resolution numerical model R-SWMS. The comparison between MRI data and the simulations showed extensive effects of root architecture parameters on solute spreading. Although the results of our study showed the strength of combining non-invasive measurements and 3D modeling of solute and water flow in soil-root systems, where the derivation of plant hydraulic parameters such as axial and radial root conductivities is possible, current limitations were found with respect to MRI measurements and process description. [1] Javaux, M., T. Schröder, J. Vanderborght, and H. Vereecken (2008), Use of a Three-Dimensional Detailed Modeling Approach for

  9. Three-dimensional numerical study on the mechanism of anisotropic MCCI by improved MPS method

    Energy Technology Data Exchange (ETDEWEB)

    Li, Xin, E-mail: lixin@fuji.waseda.jp; Yamaji, Akifumi

    2017-04-01

    Highlights: • 3-D simulation of a MCCI test was presented with improved moving particle method. • The influence of thermally stable silica aggregates on MCCI has been investigated. • The mechanisms for isotropic/anisotropic ablation have been clarified mechanistically. - Abstract: In two-dimensional (2-D) molten corium-concrete interaction (MCCI) experiments with prototypic corium and siliceous concrete, the more pronounced lateral concrete erosion behavior than that in the axial direction, namely anisotropic ablation, has been a research interest. However, the knowledge of the mechanism on this anisotropic ablation behavior, which is important for severe accident analysis and management, is still limited. In this paper, 3-D simulation of 2-D MCCI experiment VULCANO VB-U7 has been carried out with improved Moving Particle Semi-implicit (MPS) method. Heat conduction, phase change, and corium viscosity models have been developed and incorporated into MPS code MPS-SW-MAIN-Ver.2.0 for current study. The influence of thermally stable silica aggregates has been investigated by setting up different simulation cases for analysis. The simulation results suggested reasonable models and assumptions to be considered in order to achieve best estimation of MCCI with prototypic oxidic corium and siliceous concrete. The simulation results also indicated that silica aggregates can contribute to anisotropic ablation. The mechanisms for anisotropic ablation pattern in siliceous concrete as well as isotropic ablation pattern in limestone-rich concrete have been clarified from a mechanistic perspective.

  10. On the instability of a three-dimensional attachment-line boundary layer - Weakly nonlinear theory and a numerical approach

    Science.gov (United States)

    Hall, P.; Malik, M. R.

    1986-01-01

    The instability of a three-dimensional attachment-line boundary layer is considered in the nonlinear regime. Using weakly nonlinear theory, it is found that, apart from a small interval near the (linear) critical Reynolds number, finite-amplitude solutions bifurcate subcritically from the upper branch of the neutral curve. The time-dependent Navier-Stokes equations for the attachment-line flow have been solved using a Fourier-Chebyshev spectral method and the subcritical instability is found at wavenumbers that correspond to the upper branch. Both the theory and the numerical calculations show the existence of supercritical finite-amplitude (equilibrium) states near the lower branch which explains why the observed flow exhibits a preference for the lower branch modes. The effect of blowing and suction on nonlinear stability of the attachment-line boundary layer is also investigated.

  11. Numerical calculation of three-dimensional flow field of servo-piston hydraulic control rod driving mechanism

    International Nuclear Information System (INIS)

    Yu Mingrui; Han Weishi; Wang Ge

    2014-01-01

    Servo-piston hydraulic control rod driving mechanism is a new type built-in driving mechanism which is suitable for integrated reactor and it can be moved continuously. The numerical calculation and analysis of the internal three-dimensional flow field inside the driving mechanism were carried out by the computational fluid dynamics software FLUENT. The result shows that the unique pressure mutation area of flow field inside the driving mechanism is at the place of the servo variable throttle orifice. The differential pressure of the piston can be effectively controlled by changing the gap of variable throttle orifice. When the gap changes within 0.5 mm, the differential pressure can be greatly changed, and then the driving mechanism motion state would be changed too. When the working pressure is 0.1 MPa, the hoisting capacity of the driving mechanism can meet the design requirements, and the flow rate is small. (authors)

  12. A three-dimensional meso-scale modeling for helium bubble growth in metals

    International Nuclear Information System (INIS)

    Suzudo, T.; Kaburaki, H.; Wakai, E.

    2007-01-01

    A three-dimensional meso-scale computer model using a Monte-Carlo simulation method has been proposed to simulate the helium bubble growth in metals. The primary merit of this model is that it enables the visual comparison between the microstructure observed by the TEM imaging and those by calculations. The modeling is so simple that one can control easily the calculation by tuning parameters. The simulation results are confirmed by the ideal gas law and the capillary relation. helium bubble growth, meso-scale modeling, Monte-Carlo simulation, the ideal gas law and the capillary relation. (authors)

  13. Numerical simulation and analysis of ball valve three-dimensional flow based on CFD

    International Nuclear Information System (INIS)

    Zhang, S C; Zhang, Y L; Fang, Z M

    2012-01-01

    The new rotor oil-gas mixture pump that added ball valves in its export is a kind of innovative products, which can better adapt to the oil and gas mixed condition. In order to explore the rule of flow field in the export ball valve of new rotor oil-gas mixture pump, established the 3 d model of ball valve flow field was established. Using the FLUENT software, combining the standard k-ε turbulent model with multiphase flow technology and adopting the SIMPLE algorithm to simulate the 3 d gas-liquid two phase flow field in export ball valve of new rotor oil-gas mixture pump. In the different conditions that the volume of gas rate was 25%, 50%, 75%, through analyzing the velocity field, stress field and the distribution of the liquid and gas with the ball valve open height respectively at 3mm, 5mm, 7mm. Discussed how open height and different volume of gas rate to influence the field in export ball valve in the process of gas-liquid mixing was discussed. The simulation results showed that the greater the open height, the smaller the difference pressure of ball valve; the gap velocity decreasing with the open height increasing. The gas is mainly distributed in the vicinity of the valve ball in the process of gas-liquid mixing. The gas liquid ratio has a little effect on the gap velocity in the same open height. The results showed the flow field forms in the ball valve directly, to a certain degree, it had released the rules of gas-liquid flow in the valve and provided the theoretical guidance for design and optimization of the new rotor oil-gas mixture pump export ball valve.

  14. Three-dimensional in vitro cancer spheroid models for Photodynamic Therapy: Strengths and Opportunities

    Science.gov (United States)

    Evans, Conor

    2015-03-01

    Three dimensional, in vitro spheroid cultures offer considerable utility for the development and testing of anticancer photodynamic therapy regimens. More complex than monolayer cultures, three-dimensional spheroid systems replicate many of the important cell-cell and cell-matrix interactions that modulate treatment response in vivo. Simple enough to be grown by the thousands and small enough to be optically interrogated, spheroid cultures lend themselves to high-content and high-throughput imaging approaches. These advantages have enabled studies investigating photosensitizer uptake, spatiotemporal patterns of therapeutic response, alterations in oxygen diffusion and consumption during therapy, and the exploration of mechanisms that underlie therapeutic synergy. The use of quantitative imaging methods, in particular, has accelerated the pace of three-dimensional in vitro photodynamic therapy studies, enabling the rapid compilation of multiple treatment response parameters in a single experiment. Improvements in model cultures, the creation of new molecular probes of cell state and function, and innovations in imaging toolkits will be important for the advancement of spheroid culture systems for future photodynamic therapy studies.

  15. Three-dimensional dose-response models of competing risks and natural life span

    International Nuclear Information System (INIS)

    Raabe, O.G.

    1987-01-01

    Three-dimensional dose-rate/time/response surfaces for chronic exposure to carcinogens, toxicants, and ionizing radiation dramatically clarify the separate and interactive roles of competing risks. The three dimensions are average dose rate, exposure time, and risk. An illustration with computer graphics shows the contributions with the passage of time of the competing risks of death from radiation pneumonitis/fibrosis, lung cancer, and natural aging consequent to the inhalation of plutonium-239 dioxide by beagles. These relationships are further evaluated by mathematical stripping with three-dimensional illustrations that graphically show the resultant separate contribution of each fatal effect. Radiation pneumonitis predominates at high dose rates and lung cancer at intermediate dose rates. Low dose rates result in spontaneous deaths from natural aging, yielding a type of practical threshold for lung cancer induction. Risk assessment is benefited by the insights that become apparent with these three-dimensional models. The improved conceptualization afforded by them contributes to the planning and evaluation of epidemiological analyses and experimental studies involving chronic exposure to toxicants

  16. Three-dimensional numerical simulation for plastic injection-compression molding

    Science.gov (United States)

    Zhang, Yun; Yu, Wenjie; Liang, Junjie; Lang, Jianlin; Li, Dequn

    2018-03-01

    Compared with conventional injection molding, injection-compression molding can mold optical parts with higher precision and lower flow residual stress. However, the melt flow process in a closed cavity becomes more complex because of the moving cavity boundary during compression and the nonlinear problems caused by non-Newtonian polymer melt. In this study, a 3D simulation method was developed for injection-compression molding. In this method, arbitrary Lagrangian- Eulerian was introduced to model the moving-boundary flow problem in the compression stage. The non-Newtonian characteristics and compressibility of the polymer melt were considered. The melt flow and pressure distribution in the cavity were investigated by using the proposed simulation method and compared with those of injection molding. Results reveal that the fountain flow effect becomes significant when the cavity thickness increases during compression. The back flow also plays an important role in the flow pattern and redistribution of cavity pressure. The discrepancy in pressures at different points along the flow path is complicated rather than monotonically decreased in injection molding.

  17. A NEW THREE-DIMENSIONAL SOLAR WIND MODEL IN SPHERICAL COORDINATES WITH A SIX-COMPONENT GRID

    Energy Technology Data Exchange (ETDEWEB)

    Feng, Xueshang; Zhang, Man; Zhou, Yufen, E-mail: fengx@spaceweather.ac.cn [SIGMA Weather Group, State Key Laboratory for Space Weather, Center for Space Science and Applied Research, Chinese Academy of Sciences, Beijing 100190 (China)

    2014-09-01

    In this paper, we introduce a new three-dimensional magnetohydrodynamics numerical model to simulate the steady state ambient solar wind from the solar surface to 215 R {sub s} or beyond, and the model adopts a splitting finite-volume scheme based on a six-component grid system in spherical coordinates. By splitting the magnetohydrodynamics equations into a fluid part and a magnetic part, a finite volume method can be used for the fluid part and a constrained-transport method able to maintain the divergence-free constraint on the magnetic field can be used for the magnetic induction part. This new second-order model in space and time is validated when modeling the large-scale structure of the solar wind. The numerical results for Carrington rotation 2064 show its ability to produce structured solar wind in agreement with observations.

  18. Three-dimensional pulmonary model using rapid-prototyping in patient with lung cancer requiring segmentectomy.

    Science.gov (United States)

    Akiba, Tadashi; Nakada, Takeo; Inagaki, Takuya

    2014-01-01

    Thoracoscopic pulmonary segmentectomy of the lung is sometime adopted for the lung cancer, but a problem with segmentectomy is variable anatomy. Recently, we are exploring the impact of three-dimensional models using rapid-prototyping technique. It is useful for decision making, surgical planning, and intraoperative orientation for surgical treatment in patient with lung cancer who underwent pulmonary segmentectomy. These newly created models allow us to clearly identify the surgical margin and the intersegmental plane, vessels, and bronchi related to the cancer in the posterior segment. To the best of our knowledge, there are few reports describing a pulmonary model so far.

  19. A three-dimensional phase space dynamical model of the Earth's radiation belt

    International Nuclear Information System (INIS)

    Boscher, D. M.; Beutier, T.; Bourdarie, S.

    1996-01-01

    A three dimensional phase space model of the Earth's radiation belt is presented. We have taken into account the magnetic and electric radial diffusions, the pitch angle diffusions due to Coulomb interactions and interactions with the plasmaspheric hiss, and the Coulomb drag. First, a steady state of the belt is presented. Two main maxima are obtained, corresponding to the inner and outer parts of the belt. Then, we have modelled a simple injection at the external boundary. The particle transport seems like what was measured aboard satellites. A high energy particle loss is found, by comparing the model results and the measurements. It remains to be explained

  20. Accurate landmarking of three-dimensional facial data in the presence of facial expressions and occlusions using a three-dimensional statistical facial feature model.

    Science.gov (United States)

    Zhao, Xi; Dellandréa, Emmanuel; Chen, Liming; Kakadiaris, Ioannis A

    2011-10-01

    Three-dimensional face landmarking aims at automatically localizing facial landmarks and has a wide range of applications (e.g., face recognition, face tracking, and facial expression analysis). Existing methods assume neutral facial expressions and unoccluded faces. In this paper, we propose a general learning-based framework for reliable landmark localization on 3-D facial data under challenging conditions (i.e., facial expressions and occlusions). Our approach relies on a statistical model, called 3-D statistical facial feature model, which learns both the global variations in configurational relationships between landmarks and the local variations of texture and geometry around each landmark. Based on this model, we further propose an occlusion classifier and a fitting algorithm. Results from experiments on three publicly available 3-D face databases (FRGC, BU-3-DFE, and Bosphorus) demonstrate the effectiveness of our approach, in terms of landmarking accuracy and robustness, in the presence of expressions and occlusions.

  1. Finite-element three-dimensional ground-water (FE3DGW) flow model - formulation, program listings and users' manual

    International Nuclear Information System (INIS)

    Gupta, S.K.; Cole, C.R.; Bond, F.W.

    1979-12-01

    The Assessment of Effectiveness of Geologic Isolation Systems (AEGIS) Program is developing and applying the methodology for assessing the far-field, long-term post-closure safety of deep geologic nuclear waste repositories. AEGIS is being performed by Pacific Northwest Laboratory (PNL) under contract with the Office of Nuclear Waste Isolation (OWNI) for the Department of Energy (DOE). One task within AEGIS is the development of methodology for analysis of the consequences (water pathway) from loss of repository containment as defined by various release scenarios. Analysis of the long-term, far-field consequences of release scenarios requires the application of numerical codes which simulate the hydrologic systems, model the transport of released radionuclides through the hydrologic systems to the biosphere, and, where applicable, assess the radiological dose to humans. Hydrologic and transport models are available at several levels of complexity or sophistication. Model selection and use are determined by the quantity and quality of input data. Model development under AEGIS and related programs provides three levels of hydrologic models, two levels of transport models, and one level of dose models (with several separate models). This document consists of the description of the FE3DGW (Finite Element, Three-Dimensional Groundwater) Hydrologic model third level (high complexity) three-dimensional, finite element approach (Galerkin formulation) for saturated groundwater flow

  2. Effect of calcification on the mechanical stability of plaque based on a three-dimensional carotid bifurcation model

    Science.gov (United States)

    2012-01-01

    Background This study characterizes the distribution and components of plaque structure by presenting a three-dimensional blood-vessel modelling with the aim of determining mechanical properties due to the effect of lipid core and calcification within a plaque. Numerical simulation has been used to answer how cap thickness and calcium distribution in lipids influence the biomechanical stress on the plaque. Method Modelling atherosclerotic plaque based on structural analysis confirms the rationale for plaque mechanical examination and the feasibility of our simulation model. Meaningful validation of predictions from modelled atherosclerotic plaque model typically requires examination of bona fide atherosclerotic lesions. To analyze a more accurate plaque rupture, fluid-structure interaction is applied to three-dimensional blood-vessel carotid bifurcation modelling. A patient-specific pressure variation is applied onto the plaque to influence its vulnerability. Results Modelling of the human atherosclerotic artery with varying degrees of lipid core elasticity, fibrous cap thickness and calcification gap, which is defined as the distance between the fibrous cap and calcification agglomerate, form the basis of our rupture analysis. Finite element analysis shows that the calcification gap should be conservatively smaller than its threshold to maintain plaque stability. The results add new mechanistic insights and methodologically sound data to investigate plaque rupture mechanics. Conclusion Structural analysis using a three-dimensional calcified model represents a more realistic simulation of late-stage atherosclerotic plaque. We also demonstrate that increases of calcium content that is coupled with a decrease in lipid core volume can stabilize plaque structurally. PMID:22336469

  3. Effect of calcification on the mechanical stability of plaque based on a three-dimensional carotid bifurcation model

    Directory of Open Access Journals (Sweden)

    Wong Kelvin KL

    2012-02-01

    Full Text Available Abstract Background This study characterizes the distribution and components of plaque structure by presenting a three-dimensional blood-vessel modelling with the aim of determining mechanical properties due to the effect of lipid core and calcification within a plaque. Numerical simulation has been used to answer how cap thickness and calcium distribution in lipids influence the biomechanical stress on the plaque. Method Modelling atherosclerotic plaque based on structural analysis confirms the rationale for plaque mechanical examination and the feasibility of our simulation model. Meaningful validation of predictions from modelled atherosclerotic plaque model typically requires examination of bona fide atherosclerotic lesions. To analyze a more accurate plaque rupture, fluid-structure interaction is applied to three-dimensional blood-vessel carotid bifurcation modelling. A patient-specific pressure variation is applied onto the plaque to influence its vulnerability. Results Modelling of the human atherosclerotic artery with varying degrees of lipid core elasticity, fibrous cap thickness and calcification gap, which is defined as the distance between the fibrous cap and calcification agglomerate, form the basis of our rupture analysis. Finite element analysis shows that the calcification gap should be conservatively smaller than its threshold to maintain plaque stability. The results add new mechanistic insights and methodologically sound data to investigate plaque rupture mechanics. Conclusion Structural analysis using a three-dimensional calcified model represents a more realistic simulation of late-stage atherosclerotic plaque. We also demonstrate that increases of calcium content that is coupled with a decrease in lipid core volume can stabilize plaque structurally.

  4. A Three-Dimensional Pore-Scale Model for Non-Wetting Phase Mobilization with Ferrofluid

    Science.gov (United States)

    Wang, N.; Prodanovic, M.

    2017-12-01

    Ferrofluid, a stable dispersion of paramagnetic nanoparticles in water, can generate a distributed pressure difference across the phase interface in an immiscible two-phase flow under an external magnetic field. In water-wet porous media, this non-uniform pressure difference may be used to mobilize the non-wetting phase, e.g. oil, trapped in the pores. Previous numerical work by Soares et al. of two-dimensional single-pore model showed enhanced non-wetting phase recovery with water-based ferrofluid under certain magnetic field directions and decreased recovery under other directions. However, the magnetic field selectively concentrates in the high magnetic permeability ferrofluid which fills the small corners between the non-wetting phase and the solid wall. The magnetic field induced pressure is proportional to the square of local magnetic field strength and its normal component, and makes a significant impact on the non-wetting phase deformation. The two-dimensional model omitted the effect of most of these corners and is not sufficient to compute the magnetic-field-induced pressure difference or to predict the non-wetting blob deformation. Further, it is not clear that 3D effects on magnetic field in an irregular geometry can be approximated in 2D. We present a three-dimensional immiscible two-phase flow model to simulate the deformation of a non-wetting liquid blob in a single pore filled with a ferrofluid under a uniform external magnetic field. The ferrofluid is modeled as a uniform single phase because the nanoparticles are 104 times smaller than the pore. The open source CFD solver library OpenFOAM is used for the simulations based on the volume of fluid method. Simulations are performed in a converging-diverging channel model on different magnetic field direction, different initial oil saturations, and different pore shapes. Results indicate that the external magnetic field always stretches the non-wetting blob away from the solid channel wall. A magnetic

  5. Three-Dimensional, Transgenic Cell Models to Quantify Space Genotoxic Effects

    Science.gov (United States)

    Gonda, S. R.; Sognier, M. A.; Wu, H.; Pingerelli, P. L.; Glickman, B. W.; Dawson, David L. (Technical Monitor)

    1999-01-01

    The space environment contains radiation and chemical agents known to be mutagenic and carcinogenic to humans. Additionally, microgravity is a complicating factor that may modify or synergize induced genotoxic effects. Most in vitro models fail to use human cells (making risk extrapolation to humans more difficult), overlook the dynamic effect of tissue intercellular interactions on genotoxic damage, and lack the sensitivity required to measure low-dose effects. Currently a need exists for a model test system that simulates cellular interactions present in tissue, and can be used to quantify genotoxic damage induced by low levels of radiation and chemicals, and extrapolate assessed risk to humans. A state-of-the-art, three-dimensional, multicellular tissue equivalent cell culture model will be presented. It consists of mammalian cells genetically engineered to contain multiple copies of defined target genes for genotoxic assessment,. NASA-designed bioreactors were used to coculture mammalian cells into spheroids, The cells used were human mammary epithelial cells (H184135) and Stratagene's (Austin, Texas) Big Blue(TM) Rat 2 lambda fibroblasts. The fibroblasts were genetically engineered to contain -a high-density target gene for mutagenesis (60 copies of lacl/LacZ per cell). Tissue equivalent spheroids were routinely produced by inoculation of 2 to 7 X 10(exp 5) fibroblasts with Cytodex 3 beads (150 micrometers in diameter). at a 20:1 cell:bead ratio, into 50-ml HARV bioreactors (Synthecon, Inc.). Fibroblasts were cultured for 5 days, an equivalent number of epithelial cells added, and the fibroblast/epithelial cell coculture continued for 21 days. Three-dimensional spheroids with diameters ranging from 400 to 600 micrometers were obtained. Histological and immunohistochemical Characterization revealed i) both cell types present in the spheroids, with fibroblasts located primarily in the center, surrounded by epithelial cells; ii) synthesis of extracellular matrix

  6. THREE DIMENSIONAL MODELING VIA PHOTOGRAPHS FOR DOCUMENTATION OF A VILLAGE BATH

    Directory of Open Access Journals (Sweden)

    H. B. Balta

    2013-07-01

    Full Text Available The aim of this study is supporting the conceptual discussions of architectural restoration with three dimensional modeling of monuments based on photogrammetric survey. In this study, a 16th century village bath in Ulamış, Seferihisar, and Izmir is modeled for documentation. Ulamış is one of the historical villages within which Turkish population first settled in the region of Seferihisar – Urla. The methodology was tested on an antique monument; a bath with a cubical form. Within the limits of this study, only the exterior of the bath was modeled. The presentation scale for the bath was determined as 1 / 50, considering the necessities of designing structural interventions and architectural ones within the scope of a restoration project. The three dimensional model produced is a realistic document presenting the present situation of the ruin. Traditional plan, elevation and perspective drawings may be produced from the model, in addition to the realistic textured renderings and wireframe representations. The model developed in this study provides opportunity for presenting photorealistic details of historical morphologies in scale. Compared to conventional drawings, the renders based on the 3d models provide an opportunity for conceiving architectural details such as color, material and texture. From these documents, relatively more detailed restitution hypothesis can be developed and intervention decisions can be taken. Finally, the principles derived from the case study can be used for 3d documentation of historical structures with irregular surfaces.

  7. On the use of effective stress in three-dimensional hydro-mechanical coupled model

    International Nuclear Information System (INIS)

    Arairo, W.; Prunier, F.; Djeran-Maigre, I.; Millard, A.

    2014-01-01

    In the last decades, a number of hydro-mechanical elastoplastic constitutive models for unsaturated soils have been proposed. Those models couple the hydraulic and mechanical behaviour of unsaturated soils, and take into account the effects of the degree of saturation on the stress-strain behaviour and the effects of deformation on the soil-water characteristic response with a simple reversible part for the hysteresis. In addition, the influence of the suction on the stress-strain behaviour is considered. However, until now, few models predict the stress-strain and soil-water characteristic responses of unsaturated soils in a fully three-dimensional Finite Element code. This paper presents the predictions of an unsaturated soil model in a Three-dimensional Framework, and develops a study on the effect of partial saturation on the stability of shallow foundation resting on unsaturated silty soil. Qualitative predictions of the constitutive model show that incorporating a special formulation for the effective stress into an elastoplastic coupled hydro-mechanical model opens a full range of possibilities in modelling unsaturated soil behaviour. (authors)

  8. Three-Dimensional Modeling May Improve Surgical Education and Clinical Practice.

    Science.gov (United States)

    Jones, Daniel B; Sung, Robert; Weinberg, Crispin; Korelitz, Theodore; Andrews, Robert

    2016-04-01

    Three-dimensional (3D) printing has been used in the manufacturing industry for rapid prototyping and product testing. The aim of our study was to assess the feasibility of creating anatomical 3D models from a digital image using 3D printers. Furthermore, we sought face validity of models and explored potential opportunities for using 3D printing to enhance surgical education and clinical practice. Computed tomography and magnetic resonance images were reviewed, converted to computer models, and printed by stereolithography to create near exact replicas of human organs. Medical students and surgeons provided feedback via survey at the 2014 Surgical Education Week conference. There were 51 respondents, and 95.8% wanted these models for their patients. Cost was a concern, but 82.6% found value in these models at a price less than $500. All respondents thought the models would be useful for integration into the medical school curriculum. Three-dimensional printing is a potentially disruptive technology to improve both surgical education and clinical practice. As the technology matures and cost decreases, we envision 3D models being increasingly used in surgery. © The Author(s) 2015.

  9. Experiment and modeling of paired effect on evacuation from a three-dimensional space

    Energy Technology Data Exchange (ETDEWEB)

    Jun, Hu [MOE Key Laboratory for Urban Transportation Complex Systems Theory and Technology, Beijing Jiaotong University, Beijing 100044 (China); School of Traffic and Transportation, Beijing Jiaotong University, Beijing 100044 (China); Faculty of Computer Science, Chengdu Normal University, Chengdu 611130 (China); Huijun, Sun, E-mail: hjsun1@bjtu.edu.cn [MOE Key Laboratory for Urban Transportation Complex Systems Theory and Technology, Beijing Jiaotong University, Beijing 100044 (China); School of Traffic and Transportation, Beijing Jiaotong University, Beijing 100044 (China); Juan, Wei [Faculty of Computer Science, Chengdu Normal University, Chengdu 611130 (China); Xiaodan, Chen [College of Information Science and Technology, Chengdu University, Chengdu 610106 (China); Lei, You [Faculty of Computer Science, Chengdu Normal University, Chengdu 611130 (China); College of Information Science and Technology, Chengdu University, Chengdu 610106 (China); Musong, Gu [Faculty of Computer Science, Chengdu Normal University, Chengdu 611130 (China)

    2014-10-24

    A novel three-dimensional cellular automata evacuation model was proposed based on stairs factor for paired effect and variety velocities in pedestrian evacuation. In the model pedestrians' moving probability of target position at the next moment was defined based on distance profit and repulsive force profit, and evacuation strategy was elaborated in detail through analyzing variety velocities and repulsive phenomenon in moving process. At last, experiments with the simulation platform were conducted to study the relationships of evacuation time, average velocity and pedestrian velocity. The results showed that when the ratio of single pedestrian was higher in the system, the shortest route strategy was good for improving evacuation efficiency; in turn, if ratio of paired pedestrians was higher, it is good for improving evacuation efficiency to adopt strategy that avoided conflicts, and priority should be given to scattered evacuation. - Highlights: • A novel three-dimensional evacuation model was presented with stair factor. • The paired effect and variety velocities were considered in evacuation model. • The cellular automata model is improved by repulsive force.

  10. Three dimensional modeling of laterally loaded pile groups resting in sand

    Directory of Open Access Journals (Sweden)

    Amr Farouk Elhakim

    2016-04-01

    Full Text Available Many structures often carry lateral loads due to earth pressure, wind, earthquakes, wave action and ship impact. The accurate predictions of the load–displacement response of the pile group as well as the straining actions are needed for a safe and economic design. Most research focused on the behavior of laterally loaded single piles though piles are most frequently used in groups. Soil is modeled as an elastic-perfectly plastic model using the Mohr–Coulomb constitutive model. The three-dimensional Plaxis model is validated using load–displacement results from centrifuge tests of laterally loaded piles embedded in sand. This study utilizes three dimensional finite element modeling to better understand the main parameters that affect the response of laterally loaded pile groups (2 × 2 and 3 × 3 pile configurations including sand relative density, pile spacing (s = 2.5 D, 5 D and 8 D and pile location within the group. The fixity of the pile head affects its load–displacement under lateral loading. Typically, the pile head may be unrestrained (free head as the pile head is allowed to rotate, or restrained (fixed head condition where no pile head rotation is permitted. The analyses were performed for both free and fixed head conditions.

  11. Three-dimensional forward modeling of DC resistivity using the aggregation-based algebraic multigrid method

    Science.gov (United States)

    Chen, Hui; Deng, Ju-Zhi; Yin, Min; Yin, Chang-Chun; Tang, Wen-Wu

    2017-03-01

    To speed up three-dimensional (3D) DC resistivity modeling, we present a new multigrid method, the aggregation-based algebraic multigrid method (AGMG). We first discretize the differential equation of the secondary potential field with mixed boundary conditions by using a seven-point finite-difference method to obtain a large sparse system of linear equations. Then, we introduce the theory behind the pairwise aggregation algorithms for AGMG and use the conjugate-gradient method with the V-cycle AGMG preconditioner (AGMG-CG) to solve the linear equations. We use typical geoelectrical models to test the proposed AGMG-CG method and compare the results with analytical solutions and the 3DDCXH algorithm for 3D DC modeling (3DDCXH). In addition, we apply the AGMG-CG method to different grid sizes and geoelectrical models and compare it to different iterative methods, such as ILU-BICGSTAB, ILU-GCR, and SSOR-CG. The AGMG-CG method yields nearly linearly decreasing errors, whereas the number of iterations increases slowly with increasing grid size. The AGMG-CG method is precise and converges fast, and thus can improve the computational efficiency in forward modeling of three-dimensional DC resistivity.

  12. Experiment and modeling of paired effect on evacuation from a three-dimensional space

    International Nuclear Information System (INIS)

    Jun, Hu; Huijun, Sun; Juan, Wei; Xiaodan, Chen; Lei, You; Musong, Gu

    2014-01-01

    A novel three-dimensional cellular automata evacuation model was proposed based on stairs factor for paired effect and variety velocities in pedestrian evacuation. In the model pedestrians' moving probability of target position at the next moment was defined based on distance profit and repulsive force profit, and evacuation strategy was elaborated in detail through analyzing variety velocities and repulsive phenomenon in moving process. At last, experiments with the simulation platform were conducted to study the relationships of evacuation time, average velocity and pedestrian velocity. The results showed that when the ratio of single pedestrian was higher in the system, the shortest route strategy was good for improving evacuation efficiency; in turn, if ratio of paired pedestrians was higher, it is good for improving evacuation efficiency to adopt strategy that avoided conflicts, and priority should be given to scattered evacuation. - Highlights: • A novel three-dimensional evacuation model was presented with stair factor. • The paired effect and variety velocities were considered in evacuation model. • The cellular automata model is improved by repulsive force

  13. A coupled three dimensional model of vanadium redox flow battery for flow field designs

    International Nuclear Information System (INIS)

    Yin, Cong; Gao, Yan; Guo, Shaoyun; Tang, Hao

    2014-01-01

    A 3D (three-dimensional) model of VRB (vanadium redox flow battery) with interdigitated flow channel design is proposed. Two different stack inlet designs, single-inlet and multi-inlet, are structured in the model to study the distributions of fluid pressure, electric potential, current density and overpotential during operation of VRB cell. Electrolyte flow rate and stack channel dimension are proved to be the critical factors affecting flow distribution and cell performance. The model developed in this paper can be employed to optimize both VRB stack design and system operation conditions. Further improvements of the model concerning current density and electrode properties are also suggested in the paper. - Highlights: • A coupled three-dimensional model of vanadium redox flow cell is proposed. • Interdigitated flow channels with two different manifold designs are simulated. • Manifold structure affects uniformity of distribution patterns significantly. • Increased electrolyte flow rate improves cell performance for both designs. • Decreased channel size and enlarged land width enhance cell voltage

  14. Model - including thermal creep effects - for the analysis of three-dimensional concrete structures

    International Nuclear Information System (INIS)

    Rodriguez, C.; Rebora, B.; Favrod, J.D.

    1979-01-01

    This article presents the most recent developments and results of research carried out by IPEN to establish a mathematical model for the non-linear rheological three-dimensional analysis of massive prestressed concrete structures. The main point of these latest developments is the simulation of the creep of concrete submitted to high temperatures over a long period of time. This research, financed by the Swiss National Science Foundation, has taken an increased importance with the advent of nuclear reactor vessels of the HHT type and new conceptions concerning the cooling of their concrete (replacement of the thermal insulation by a zone of hot concrete). (orig.)

  15. A new method for three-dimensional laparoscopic ultrasound model reconstruction

    DEFF Research Database (Denmark)

    Fristrup, C W; Pless, T; Durup, J

    2004-01-01

    BACKGROUND: Laparoscopic ultrasound is an important modality in the staging of gastrointestinal tumors. Correct staging depends on good spatial understanding of the regional tumor infiltration. Three-dimensional (3D) models may facilitate the evaluation of tumor infiltration. The aim of the study...... accuracy of the new method was tested ex vivo, and the clinical feasibility was tested on a small series of patients. RESULTS: Both electromagnetic tracked reconstructions and the new 3D method gave good volumetric information with no significant difference. Clinical use of the new 3D method showed...

  16. Plasmas in particle accelerators: a hydrodynamic model of three-dimensional electrostatic instabilities

    International Nuclear Information System (INIS)

    Krafft, G.A.; Mark, J.W.K.; Wang, T.S.F.

    1983-01-01

    In an earlier paper, closed hydrodynamic equations were derived with possible application to the simulation of beam plasmas relevant to designs of heavy ion accelerators for inertial confinement fusion energy applications. The closure equations involved a novel feature of anisotropic stresses even transverse to the beam. A related hydrodynamic model is used in this paper to examine further the boundaries of validity of such hydrodynamic approximations. It is also proposed as a useful tool to provide an economic means for searching the large parameter space relevant to three-dimensional stability problems involving coupling of longitudinal and transverse motions in the presence of wall impedance

  17. Verification and Validation of a Three-Dimensional Orthotropic Plasticity Constitutive Model Using a Unidirectional Composite

    Directory of Open Access Journals (Sweden)

    Canio Hoffarth

    2017-03-01

    Full Text Available A three-dimensional constitutive model has been developed for modeling orthotropic composites subject to impact loads. It has three distinct components—a deformation model involving elastic and plastic deformations; a damage model; and a failure model. The model is driven by tabular data that is generated either using laboratory tests or via virtual testing. A unidirectional composite—T800/F3900, commonly used in the aerospace industry, is used in the verification and validation tests. While the failure model is under development, these tests indicate that the implementation of the deformation and damage models in a commercial finite element program, LS-DYNA, is efficient, robust and accurate.

  18. A numerical solution to three-dimensional multiphase transport of volatile organic compounds in unsaturated soils -- with an application to the remedial method of in-situ volatilization

    International Nuclear Information System (INIS)

    Filley, T.; Tomasko, D.

    1992-04-01

    Part I of this paper presents the development and application of a numerical model for determining the fate and transport of volatile organic compounds (VOCS) in the unsaturated zone resulting from forced volatilization and gaseous advection-dispersion of organic vapor in a multipartitioned three-dimensional environment. The model allows for single-component transport in the gas and water phases. The hydrocarbon is assumed to be in specific retention and, therefore, immobile. Partitioning of the hydrocarbon between the oil, water, gas, and soil is developed as rate-limited functions that are incorporated into sink/source terms in the transport equations. The code for the model was developed specifically to investigate in-situ volatilization (ISV) remedial strategies, predict the extent of cleanup from information obtained at a limited number of measurement locations, and to help design ISV remedial systems. Application of the model is demonstrated for a hypothetical one-dimensional ISV system. Part II of this paper will present the analysis of an existing ISV system using the full three-dimensional capability of the model

  19. Three-dimensional holographic optical manipulation through a high-numerical-aperture soft-glass multimode fibre

    Science.gov (United States)

    Leite, Ivo T.; Turtaev, Sergey; Jiang, Xin; Šiler, Martin; Cuschieri, Alfred; Russell, Philip St. J.; Čižmár, Tomáš

    2018-01-01

    Holographic optical tweezers (HOT) hold great promise for many applications in biophotonics, allowing the creation and measurement of minuscule forces on biomolecules, molecular motors and cells. Geometries used in HOT currently rely on bulk optics, and their exploitation in vivo is compromised by the optically turbid nature of tissues. We present an alternative HOT approach in which multiple three-dimensional (3D) traps are introduced through a high-numerical-aperture multimode optical fibre, thus enabling an equally versatile means of manipulation through channels having cross-section comparable to the size of a single cell. Our work demonstrates real-time manipulation of 3D arrangements of micro-objects, as well as manipulation inside otherwise inaccessible cavities. We show that the traps can be formed over fibre lengths exceeding 100 mm and positioned with nanometric resolution. The results provide the basis for holographic manipulation and other high-numerical-aperture techniques, including advanced microscopy, through single-core-fibre endoscopes deep inside living tissues and other complex environments.

  20. Numerical study of three-dimensional natural convection and entropy generation in a cubical cavity with partially active vertical walls

    Directory of Open Access Journals (Sweden)

    Abdullah A.A.A Al-Rashed

    2017-09-01

    Full Text Available Natural convection and entropy generation due to the heat transfer and fluid friction irreversibilities in a three-dimensional cubical cavity with partially heated and cooled vertical walls has been investigated numerically using the finite volume method. Four different arrangements of partially active vertical sidewalls of the cubical cavity are considered. Numerical calculations are carried out for Rayleigh numbers from (103 ≤ Ra ≤ 106, various locations of the partial heating and cooling vertical sidewalls, while the Prandtl number of air is considered constant as Pr=0.7 and the irreversibility coefficient is taken as (φ=10−4. The results explain that the total entropy generation rate increases when the Rayleigh number increases. While, the Bejan number decreases as the Rayleigh number increases. Also, it is found that the arrangements of heating and cooling regions have a significant effect on the fluid flow and heat transfer characteristics of natural convection and entropy generation in a cubical cavity. The Middle-Middle arrangement produces higher values of average Nusselt numbers.

  1. Three-dimensional analytic probabilities of coupled vibrational-rotational-translational energy transfer for DSMC modeling of nonequilibrium flows

    International Nuclear Information System (INIS)

    Adamovich, Igor V.

    2014-01-01

    A three-dimensional, nonperturbative, semiclassical analytic model of vibrational energy transfer in collisions between a rotating diatomic molecule and an atom, and between two rotating diatomic molecules (Forced Harmonic Oscillator–Free Rotation model) has been extended to incorporate rotational relaxation and coupling between vibrational, translational, and rotational energy transfer. The model is based on analysis of semiclassical trajectories of rotating molecules interacting by a repulsive exponential atom-to-atom potential. The model predictions are compared with the results of three-dimensional close-coupled semiclassical trajectory calculations using the same potential energy surface. The comparison demonstrates good agreement between analytic and numerical probabilities of rotational and vibrational energy transfer processes, over a wide range of total collision energies, rotational energies, and impact parameter. The model predicts probabilities of single-quantum and multi-quantum vibrational-rotational transitions and is applicable up to very high collision energies and quantum numbers. Closed-form analytic expressions for these transition probabilities lend themselves to straightforward incorporation into DSMC nonequilibrium flow codes

  2. Three-dimensional flow structure measurements behind a queue of studied model vehicles

    International Nuclear Information System (INIS)

    Huang, J.F.; Chan, T.L.; Zhou, Y.

    2009-01-01

    The three-dimensional flow structures of a queue of studied model vehicles (i.e., one-, two- and three-vehicle cases) were investigated comprehensively in a closed-circuit wind tunnel using particle image velocimetry (PIV) for the typical urban vehicle speeds (i.e., 10, 30 and 50 km/h). In this three-dimensional vehicle wake, a pair of longitudinal vortices is characterized by counter-rotating and moving downstream at relatively low velocity than their surrounding flow. The flow structures of multiple studied model vehicles are dominated by the wake generated from the last studied model vehicle but the preceding studied model vehicle(s) also has/have some minor effects. Cross-sectional turbulence distribution is non-uniform in the far-wake region for all studied cases. The lowest turbulence occurs at the center part of the vehicle wake while high turbulence occurs at its two sides. As such, it may lead to considerable underestimation in turbulence magnitude if the measurement is only taken along the centerline of the vehicle wake.

  3. THREE-DIMENSIONAL GEOFILTRATIONAL MODEL OF THE ROGUN HYDRO POWER PLANT CONSTRUCTION SITE

    Directory of Open Access Journals (Sweden)

    Khokhotva Sergey Nikolaevich

    2017-05-01

    Full Text Available The article deals with technique of creation and results of calculations of the three-dimensional geofiltrational model of the Rogun HPP construction site. When performing works on creation of the Rogun HPP three-dimensional geofiltration model, geological and hydrogeological conditions of the Rogun HPP construction site were analyzed. They showed that the construction site consists mostly of fractured rocks of various weathering degrees. In terms of preservation, four preservation zones were identified in the rock mass. These zones define the features of hydrogeological conditions that have emerged in the area of construction. Calculation results illustrated the absence of seepage areas on the lower slope of dam; this is the indication of normal operation of the dam impervious circuit. The drainage system of the underground hydropower plant has a high efficiency. Operation of the drainage galleries complex leads to a significant reduction of piezometric pressure on roofs of the machine and transformer halls. Above the underground structures a completely drained area is formed. Completed forecast calculations on geofiltration model of the Rogun hydropower plant determine the hydrostatic pressure and piezometric pressure at any point of the modeled area. These data can be used as loads while designing of lining of underground workings.

  4. A three-dimensional cohesive sediment transport model with data assimilation: Model development, sensitivity analysis and parameter estimation

    Science.gov (United States)

    Wang, Daosheng; Cao, Anzhou; Zhang, Jicai; Fan, Daidu; Liu, Yongzhi; Zhang, Yue

    2018-06-01

    Based on the theory of inverse problems, a three-dimensional sigma-coordinate cohesive sediment transport model with the adjoint data assimilation is developed. In this model, the physical processes of cohesive sediment transport, including deposition, erosion and advection-diffusion, are parameterized by corresponding model parameters. These parameters are usually poorly known and have traditionally been assigned empirically. By assimilating observations into the model, the model parameters can be estimated using the adjoint method; meanwhile, the data misfit between model results and observations can be decreased. The model developed in this work contains numerous parameters; therefore, it is necessary to investigate the parameter sensitivity of the model, which is assessed by calculating a relative sensitivity function and the gradient of the cost function with respect to each parameter. The results of parameter sensitivity analysis indicate that the model is sensitive to the initial conditions, inflow open boundary conditions, suspended sediment settling velocity and resuspension rate, while the model is insensitive to horizontal and vertical diffusivity coefficients. A detailed explanation of the pattern of sensitivity analysis is also given. In ideal twin experiments, constant parameters are estimated by assimilating 'pseudo' observations. The results show that the sensitive parameters are estimated more easily than the insensitive parameters. The conclusions of this work can provide guidance for the practical applications of this model to simulate sediment transport in the study area.

  5. Distributed organization of a brain microcircuit analysed by three-dimensional modeling: the olfactory bulb

    Directory of Open Access Journals (Sweden)

    Michele eMigliore

    2014-04-01

    Full Text Available The functional consequences of the laminar organization observed in cortical systems cannot be easily studied using standard experimental techniques, abstract theoretical representations, or dimensionally reduced models built from scratch. To solve this problem we have developed a full implementation of an olfactory bulb microcircuit using realistic three-dimensional inputs, cell morphologies, and network connectivity. The results provide new insights into the relations between the functional properties of individual cells and the networks in which they are embedded. To our knowledge, this is the first model of the mitral-granule cell network to include a realistic representation of the experimentally-recorded complex spatial patterns elicited in the glomerular layer by natural odor stimulation. Although the olfactory bulb, due to its organization, has unique advantages with respect to other brain systems, the method is completely general, and can be integrated with more general approaches to other systems. The model makes experimentally testable predictions on distributed processing and on the differential backpropagation of somatic action potentials in each lateral dendrite following odor learning, providing a powerful three-dimensional framework for investigating the functions of brain microcircuits.

  6. A preliminary three-dimensional geological framework model for Yucca Mountain

    International Nuclear Information System (INIS)

    Stirewalt, G.L.; Henderson, D.B.

    1995-01-01

    A preliminary three-dimensional geological framework model has been developed for the potential high-level radioactive waste disposal site at Yucca Mountain. The model is based on field data and was constructed using EarthVision (Version 2.0) software. It provides the basic geological framework in which variations in geological parameters and features in and adjacent to the repository block can be illustrated and analyzed. With further refinement and modification of the model through incorporation of additional data, it can be used by Nuclear Regulatory Commission (NRC) staff to determine whether representation of subsurface geological features in Department of Energy models is reasonable. Consequently, NRC staff will be able to use the model during pre-licensing and licensing phases to assess models for analyses of site suitability, design considerations, and repository performance

  7. Comparison of three-dimensional parameters of Halo CMEs using three cone models

    Science.gov (United States)

    Na, H.; Moon, Y.; Jang, S.; Lee, K.

    2012-12-01

    Halo coronal mass ejections (HCMEs) are a major cause of geomagnetic storms and their three dimensional structures are important for space weather. In this study, we compare three cone models: an elliptical cone model, an ice-cream cone model, and an asymmetric cone model. These models allow us to determine the three dimensional parameters of HCMEs such as radial speed, angular width, and the angle (γ) between sky plane and cone axis. We compare these parameters obtained from three models using 62 well-observed HCMEs observed by SOHO/LASCO from 2001 to 2002. Then we obtain the root mean square error (RMS error) between maximum measured projection speeds and their calculated projection speeds from the cone models. As a result, we find that the radial speeds obtained from the models are well correlated with one another (R > 0.84). The correlation coefficients between angular widths are ranges from 0.04 to 0.53 and those between γ values are from -0.15 to 0.47, which are much smaller than expected. The reason may be due to different assumptions and methods. The RMS errors between the maximum measured projection speeds and the maximum estimated projection speeds of the elliptical cone model, the ice-cream cone model, and the asymmetric cone model are 213 km/s, 254 km/s, and 267 km/s, respectively. And we obtain the correlation coefficients between the location from the models and the flare location (R > 0.75). Finally, we discuss strengths and weaknesses of these models in terms of space weather application.

  8. Development of a three-dimensional CFD model for rotary lime kilns

    Energy Technology Data Exchange (ETDEWEB)

    Lixin Tao; Blom, Roger (FS Dynamics Sweden AB, Goeteborg (Sweden)); Nordgren, Daniel (Innventia, Stockholm (Sweden))

    2010-11-15

    In the calcium loop of the recovery cycle in a Kraft process of pulp and paper production, rotary lime kilns are used to convert the lime mud, mainly CaCO3, back to quick lime, CaO, for re-use in the causticizing process. The lime kilns are one of the major energy consumption devices for paper and pulp industry. Because of the rising oil price and new emission limits, the pulp mills have been forced to look for alternative fuels for their lime kilns. One interesting alternative to oil, often easily available at pulp mills, is biofuels such as sawdust and bark. However the practical kiln operation often encounters some difficulties because of the uncertainties around the biofuel impact on the lime kiln performance. A deeper understanding of the flame characteristics is required when shifting from oil to biofuels. Fortunately recent advances in modern Computational Fluid Dynamics, CFD, have provided the possibility to study and predict the detailed flame characteristics regarding the lime kiln performance. In this project a three-dimensional CFD model for rotary lime kilns has been developed. To simulate a rotary lime kiln the developed CFD model integrates the three essential sub-models, i.e. the freeboard hot flow model, the lime bed model and the rotating refractory wall model and it is developed based on the modern CFD package: FLUENT which is commercially available on the market. The numerical simulations using the developed CFD model have been performed for three selected kiln operations fired with three different fuel mixtures. The predicted results from the CFD modelling are presented and discussed in order to compare the impacts on the kiln performance due to the different firing conditions. During the development, the lime kiln at the Soedra Cell Moensteraas mill has been used as reference kiln. To validate the CFD model, in-plant measurements were carried out in the Moensteraas lime kiln during an experiment campaign. The results obtained from the

  9. A three-dimensional model of PEM fuel cells with serpentine flow channels

    International Nuclear Information System (INIS)

    Nguyen, P.T.; Berning, T.; Bang, M.; Djilali, N.

    2003-01-01

    A three-dimensional computational model of PEM fuel cell with serpentine flow field channels is presented in this paper. This model presents a comprehensive account for all important transport phenomena in fuel cell such as heat transfer, mass transfer, electrode kinetics, and potential fields in the membrane and gas diffusion layers. A new approach of solving for the potential losses across the cell was also developed in this model. The dependency of local current density on oxygen concentration and activation overpotential is fully addressed in this model. The computational domain consists of serpentine gas flow channels, porous gas diffusion layers, catalyst layers, and a membrane. Results obtained from this model are in good agreement with experimental results. (author)

  10. Computer-aided-design-model-assisted absolute three-dimensional shape measurement.

    Science.gov (United States)

    Li, Beiwen; Bell, Tyler; Zhang, Song

    2017-08-20

    Conventional three-dimensional (3D) shape measurement methods are typically generic to all types of objects. Yet, for many measurement conditions, such a level of generality is inessential when having the preknowledge of the object geometry. This paper introduces a novel adaptive algorithm for absolute 3D shape measurement with the assistance of the object computer-aided-design (CAD) model. The proposed algorithm includes the following major steps: (1) export the 3D point cloud data from the CAD model; (2) transform the CAD model into the camera perspective; (3) obtain a wrapped phase map from three phase-shifted fringe images; and (4) retrieve absolute phase and 3D geometry assisted by the CAD model. We demonstrate that if object CAD models are available, such an algorithm is efficient in recovering absolute 3D geometries of both simple and complex objects with only three phase-shifted fringe images.

  11. FRiED: A NOVEL THREE-DIMENSIONAL MODEL OF CORONAL MASS EJECTIONS

    International Nuclear Information System (INIS)

    Isavnin, A.

    2016-01-01

    We present a novel three-dimensional (3D) model of coronal mass ejections (CMEs) that unifies all key evolutionary aspects of CMEs and encapsulates their 3D magnetic field configuration. This fully analytic model is capable of reproducing the global geometrical shape of a CME with all major deformations taken into account, i.e., deflection, rotation, expansion, “pancaking,” front flattening, and rotational skew. Encapsulation of 3D magnetic structure allows the model to reproduce in-situ measurements of magnetic field for trajectories of spacecraft-CME encounters of any degree of complexity. As such, the model can be used single-handedly for the consistent analysis of both remote and in-situ observations of CMEs at any heliocentric distance. We demonstrate the latter by successfully applying the model for the analysis of two CMEs.

  12. FITTING A THREE DIMENSIONAL PEM FUEL CELL MODEL TO MEASUREMENTS BY TUNING THE POROSITY AND

    DEFF Research Database (Denmark)

    Bang, Mads; Odgaard, Madeleine; Condra, Thomas Joseph

    2004-01-01

    the distribution of current density and further how thisaffects the polarization curve.The porosity and conductivity of the catalyst layer are some ofthe most difficult parameters to measure, estimate and especiallycontrol. Yet the proposed model shows how these two parameterscan have significant influence...... on the performance of the fuel cell.The two parameters are shown to be key elements in adjusting thethree-dimensional model to fit measured polarization curves.Results from the proposed model are compared to single cellmeasurements on a test MEA from IRD Fuel Cells.......A three-dimensional, computational fluid dynamics (CFD) model of a PEM fuel cell is presented. The model consists ofstraight channels, porous gas diffusion layers, porous catalystlayers and a membrane. In this computational domain, most ofthe transport phenomena which govern the performance of the...

  13. Three-dimensional linear fracture mechanics analysis by a displacement-hybrid finite-element model

    International Nuclear Information System (INIS)

    Atluri, S.N.; Kathiresan, K.; Kobayashi, A.S.

    1975-01-01

    This paper deals with a finite-element procedures for the calculation of modes I, II and III stress intensity factors, which vary, along an arbitrarily curved three-dimensional crack front in a structural component. The finite-element model is based on a modified variational principle of potential energy with relaxed continuity requirements for displacements at the inter-element boundary. The variational principle is a three-field principle, with the arbitrary interior displacements for the element, interelement boundary displacements, and element boundary tractions as variables. The unknowns in the final algebraic system of equations, in the present displacement hybrid finite element model, are the nodal displacements and the three elastic stress intensity factors. Special elements, which contain proper square root and inverse square root crack front variations in displacements and stresses, respectively, are used in a fixed region near the crack front. Interelement displacement compatibility is satisfied by assuming an independent interelement boundary displacement field, and using a Lagrange multiplier technique to enforce such interelement compatibility. These Lagrangean multipliers, which are physically the boundary tractions, are assumed from an equilibrated stress field derived from three-dimensional Beltrami (or Maxwell-Morera) stress functions that are complete. However, considerable care should be exercised in the use of these stress functions such that the stresses produced by any of these stress function components are not linearly dependent

  14. Three-Dimensional Flow Separation Induced by a Model Vocal Fold Polyp

    Science.gov (United States)

    Stewart, Kelley C.; Erath, Byron D.; Plesniak, Michael W.

    2012-11-01

    The fluid-structure energy exchange process for normal speech has been studied extensively, but it is not well understood for pathological conditions. Polyps and nodules, which are geometric abnormalities that form on the medial surface of the vocal folds, can disrupt vocal fold dynamics and thus can have devastating consequences on a patient's ability to communicate. A recent in-vitro investigation of a model polyp in a driven vocal fold apparatus demonstrated that such a geometric abnormality considerably disrupts the glottal jet behavior and that this flow field adjustment was a likely reason for the severe degradation of the vocal quality in patients. Understanding of the formation and propagation of vortical structures from a geometric protuberance, and their subsequent impact on the aerodynamic loadings that drive vocal fold dynamic, is a critical component in advancing the treatment of this pathological condition. The present investigation concerns the three-dimensional flow separation induced by a wall-mounted prolate hemispheroid with a 2:1 aspect ratio in cross flow, i.e. a model vocal fold polyp. Unsteady three-dimensional flow separation and its impact of the wall pressure loading are examined using skin friction line visualization and wall pressure measurements. Supported by the National Science Foundation, Grant No. CBET-1236351 and GW Center for Biomimetics and Bioinspired Engineering (COBRE).

  15. Construction of a Three-Dimensional in vitro skin model on polycaprolactone fibers.

    Science.gov (United States)

    Liu, Qi; Zhang, Ru-Zhi; Xu, Bin

    2017-05-16

    To observe the morphological characteristics and the biological properties of human epidermal cells when cultured at an air-liquid interface in polycaprolactone (PCL) fibers as a three-dimensional scaffold for tissue engineering. In this study, the melanocytes and keratinocytes were obtained from human scalp skin, seeded onto a PCL film, and cocultured for 2 weeks to construct a three-dimensional (3D) skin model. The cells were then characterized by hematoxylin and eosin (H&E) staining, by immunohistochemical staining with antibodies to cytokeratin 15 (CK15), Ki-67, CD34, CD200 and HMB45 and by transmission electron microscopy. Keratinocytes and melanocytes grew well in the co-culture system. Hematoxylin and eosin staining revealed that the cells adhered to the PCLfiber scaffold well, the keratinocyte layer became a multilayered concentric structure and the surface became distinctly keratinized at the air-liquid interface. Immunohistochemical analyses exhibited a scattered distribution of cells expressing CK15, CD34, CD200, Ki-67 and/or HMB45. Transmission electron microscopy revealed that the keratinocytes contained a number of keratin fibrils and membrane-coated granules. The PCL scaffold has excellent adhesiveness and biocompatibility with human epidermal cells, and is suitable for constructing 3D skin models for tissue engineering in the future.

  16. Continuation of full-scale three-dimensional numerical experiments on high-intensity particle and laser beam-matter interactions

    Energy Technology Data Exchange (ETDEWEB)

    Mori, Warren, B.

    2012-12-01

    We present results from the grant entitled, Continuation of full-scale three-dimensional numerical experiments on high-intensity particle and laser beam-matter interactions. The research significantly advanced the understanding of basic high-energy density science (HEDS) on ultra intense laser and particle beam plasma interactions. This advancement in understanding was then used to to aid in the quest to make 1 GeV to 500 GeV plasma based accelerator stages. The work blended basic research with three-dimensions fully nonlinear and fully kinetic simulations including full-scale modeling of ongoing or planned experiments. The primary tool was three-dimensional particle-in-cell simulations. The simulations provided a test bed for theoretical ideas and models as well as a method to guide experiments. The research also included careful benchmarking of codes against experiment. High-fidelity full-scale modeling provided a means to extrapolate parameters into regimes that were not accessible to current or near term experiments, thereby allowing concepts to be tested with confidence before tens to hundreds of millions of dollars were spent building facilities. The research allowed the development of a hierarchy of PIC codes and diagnostics that is one of the most advanced in the world.

  17. Fast numerical method for solving the three-dimensional Stokes' equations in the presence of suspended particles

    International Nuclear Information System (INIS)

    Fogelson, A.L.; Peskin, C.S.

    1988-01-01

    A new fast numerical method for solving the three-dimensional Stokes' equations in the presence of suspended particles is presented. The fluid dynamics equations are solved on a lattice. A particle is represented by a set of points each of which moves at the local fluid velocity and is not constrained to lie on the lattice. These points are coupled by forces which resist deformation of the particle. These forces contribute to the force density in the Stokes' equations. As a result, a single set of fluid dynamics equations holds at all points of the domain and there are no internal boundaries. Particles size, shape, and deformability may be prescribed. Computational work increases only linearly with the number of particles, so large numbers (500--1000) of particles may be studied efficiently. The numerical method involves implicit calculation of the particle forces by minimizing an energy function and solution of a finite-difference approximation to the Stokes' equations using the Fourier--Toeplitz method. The numerical method has been implemented to run on all CRAY computers: the implementation exploits the CRAY's vectorized arithmetic, and on machines with insufficient central memory, it performs efficient disk I/O while storing most of the data on disk. Applications of the method to sedimentation of one-, two-, and many-particle systems are described. Trajectories and settling speeds for two-particle sedimentation, and settling speed for multiparticle sedimentation from initial distributions on a cubic lattice or at random give good quantitative agreement with existing theories. copyright 1988 Academic Press, Inc

  18. Three-dimensional modeling of air flow and pollutant dispersion in an urban street canyon with thermal effects.

    Science.gov (United States)

    Tsai, Mong-Yu; Chen, Kang-Shin; Wu, Chung-Hsing

    2005-08-01

    Effects of excess ground and building temperatures on airflow and dispersion of pollutants in an urban street canyon with an aspect ratio of 0.8 and a length-to-width ratio of 3 were investigated numerically. Three-dimensional governing equations of mass, momentum, energy, and species were modeled using the RNG k-epsilon turbulence model and Boussinesq approximation, which were solved using the finite volume method. Vehicle emissions were estimated from the measured traffic flow rates and modeled as banded line sources, with a street length and bandwidths equal to typical vehicle widths. Both measurements and simulations reveal that pollutant concentrations typically follow the traffic flow rate; they decline as the height increases and are higher on the leeward side than on the windward side. Three-dimensional simulations reveal that the vortex line, joining the centers of cross-sectional vortexes of the street canyon, meanders between street buildings and shifts toward the windward side when heating strength is increased. Thermal boundary layers are very thin. Entrainment of outside air increases, and pollutant concentration decreases with increasing heating condition. Also, traffic-produced turbulence enhances the turbulent kinetic energy and the mixing of temperature and admixtures in the canyon. Factors affecting the inaccuracy of the simulations are addressed.

  19. Three-dimensional modelling of slope stability using the Local Factor of Safety concept

    Science.gov (United States)

    Moradi, Shirin; Huisman, Sander; Beck, Martin; Vereecken, Harry; Class, Holger

    2017-04-01

    Slope stability is governed by coupled hydrological and mechanical processes. The slope stability depends on the effective stress, which in turn depends on the weight of the soil and the matrix potential. Therefore, changes in water content and matrix potential associated with infiltration will affect slope stability. Most available models describing these coupled hydro-mechanical processes either rely on a one- or two-dimensional representation of hydrological and mechanical properties and processes, which obviously is a strong simplification in many applications. Therefore, the aim of this work is to develop a three-dimensional hydro-mechanical model that is able to capture the effect of spatial and temporal variability of both mechanical and hydrological parameters on slope stability. For this, we rely on DuMux, which is a free and open-source simulator for flow and transport processes in porous media that facilitates coupling of different model approaches and offers flexibility for model development. We use the Richards equation to model unsaturated water flow. The simulated water content and matrix potential distribution is used to calculate the effective stress. We only consider linear elasticity and solve for statically admissible fields of stress and displacement without invoking failure or the redistribution of post-failure stress or displacement. The Local Factor of Safety concept is used to evaluate slope stability in order to overcome some of the main limitations of commonly used methods based on limit equilibrium considerations. In a first step, we compared our model implementation with a 2D benchmark model that was implemented in COMSOL Multiphysics. In a second step, we present in-silico experiments with the newly developed 3D model to show the effect of slope morphology, spatial variability in hydraulic and mechanical material properties, and spatially variable soil depth on simulated slope stability. It is expected that this improved physically

  20. A three-dimensional mediastinal model created with rapid prototyping in a patient with ectopic thymoma.

    Science.gov (United States)

    Akiba, Tadashi; Nakada, Takeo; Inagaki, Takuya

    2015-01-01

    Preoperative three-dimensional (3D) imaging of a mediastinal tumor using two-dimensional (2D) axial computed tomography is sometimes difficult, and an unexpected appearance of the tumor may be encountered during surgery. In order to evaluate the preoperative feasibility of a 3D mediastinal model that used the rapid prototyping technique, we created a model and report its results. The 2D image showed some of the relationship between the tumor and the pericardium, but the 3D mediastinal model that was created using the rapid prototyping technique showed the 3D lesion in the outer side of the extrapericardium. The patient underwent a thoracoscopic resection of the tumor, and the pathological examination showed a rare middle mediastinal ectopic thymoma. We believe that the construction of mediastinal models is useful for thoracoscopic surgery and other complicated surgeries of the chest diseases.

  1. Three-dimensional models of conventional and vertical junction laser-photovoltaic energy converters

    Science.gov (United States)

    Heinbockel, John H.; Walker, Gilbert H.

    1988-01-01

    Three-dimensional models of both conventional planar junction and vertical junction photovoltaic energy converters have been constructed. The models are a set of linear partial differential equations and take into account many photoconverter design parameters. The model is applied to Si photoconverters; however, the model may be used with other semiconductors. When used with a Nd laser, the conversion efficiency of the Si vertical junction photoconverter is 47 percent, whereas the efficiency for the conventional planar Si photoconverter is only 17 percent. A parametric study of the Si vertical junction photoconverter is then done in order to describe the optimum converter for use with the 1.06-micron Nd laser. The efficiency of this optimized vertical junction converter is 44 percent at 1 kW/sq cm.

  2. Verification and Validation of a Three-Dimensional Generalized Composite Material Model

    Science.gov (United States)

    Hoffarth, Canio; Harrington, Joseph; Rajan, Subramaniam D.; Goldberg, Robert K.; Carney, Kelly S.; DuBois, Paul; Blankenhorn, Gunther

    2015-01-01

    A general purpose orthotropic elasto-plastic computational constitutive material model has been developed to improve predictions of the response of composites subjected to high velocity impact. The three-dimensional orthotropic elasto-plastic composite material model is being implemented initially for solid elements in LS-DYNA as MAT213. In order to accurately represent the response of a composite, experimental stress-strain curves are utilized as input, allowing for a more general material model that can be used on a variety of composite applications. The theoretical details are discussed in a companion paper. This paper documents the implementation, verification and qualitative validation of the material model using the T800-F3900 fiber/resin composite material

  3. An three-dimensional imaging algorithm based on the radiation model of electric dipole

    International Nuclear Information System (INIS)

    Tian Bo; Zhong Weijun; Tong Chuangming

    2011-01-01

    A three-dimensional imaging algorithm based on the radiation model of dipole (DBP) is presented. On the foundation of researching the principle of the back projection (BP) algorithm, the relationship between the near field imaging model and far field imaging model is analyzed based on the scattering model. Firstly, the far field sampling data is transferred to the near field sampling data through applying the radiation theory of dipole. Then the dealt sampling data was projected to the imaging region to obtain the images of targets. The capability of the new algorithm to detect targets is verified by using finite-difference time-domain method (FDTD), and the coupling effect for imaging is analyzed. (authors)

  4. Three-dimensional cellular automata as a model of a seismic fault

    International Nuclear Information System (INIS)

    Gálvez, G; Muñoz, A

    2017-01-01

    The Earth's crust is broken into a series of plates, whose borders are the seismic fault lines and it is where most of the earthquakes occur. This plating system can in principle be described by a set of nonlinear coupled equations describing the motion of the plates, its stresses, strains and other characteristics. Such a system of equations is very difficult to solve, and nonlinear parts leads to a chaotic behavior, which is not predictable. In 1989, Bak and Tang presented an earthquake model based on the sand pile cellular automata. The model though simple, provides similar results to those observed in actual earthquakes. In this work the cellular automata in three dimensions is proposed as a best model to approximate a seismic fault. It is noted that the three-dimensional model reproduces similar properties to those observed in real seismicity, especially, the Gutenberg-Richter law. (paper)

  5. Three-dimensional Monte Carlo model of pulsed-laser treatment of cutaneous vascular lesions

    Science.gov (United States)

    Milanič, Matija; Majaron, Boris

    2011-12-01

    We present a three-dimensional Monte Carlo model of optical transport in skin with a novel approach to treatment of side boundaries of the volume of interest. This represents an effective way to overcome the inherent limitations of ``escape'' and ``mirror'' boundary conditions and enables high-resolution modeling of skin inclusions with complex geometries and arbitrary irradiation patterns. The optical model correctly reproduces measured values of diffuse reflectance for normal skin. When coupled with a sophisticated model of thermal transport and tissue coagulation kinetics, it also reproduces realistic values of radiant exposure thresholds for epidermal injury and for photocoagulation of port wine stain blood vessels in various skin phototypes, with or without application of cryogen spray cooling.

  6. A three-dimensional model for negative half cell of the vanadium redox flow battery

    International Nuclear Information System (INIS)

    Ma Xiangkun; Zhang Huamin; Xing Feng

    2011-01-01

    A stationary, isothermal, three-dimensional model for negative half cell of the vanadium redox flow battery is developed, which is based on the comprehensive conservation laws, such as charge, mass and momentum, together with a kinetic model for reaction involving vanadium species. The model is validated against the results calculated by the available two-dimensional model. With the given geometry of the negative half cell, the distributions of velocity, concentration, overpotential and transfer current density in the sections that are perpendicular and parallel to the applied current are studied. It is shown that the distribution of the electrolyte velocity in the electrode has significant impact on the distribution of concentration, overpotential and transfer current density. The lower velocity in the electrode will cause the higher overpotential, further result in the side reaction and corrosion of key materials locally. The development of the design of the vanadium redox flow battery is discussed, and the further research is proposed.

  7. Three-dimensional numerical study of flow and heat transfer from a cube placed in a uniform flow

    International Nuclear Information System (INIS)

    Saha, A.K.

    2006-01-01

    The fluid flow and heat transfer from a stationary cube placed in a uniform flow is studied numerically. The three-dimensional unsteady Navier Stokes and energy equations are solved using higher order temporal and spatial discretizations. Computations are carried out for a Reynolds number range of 50-400. At Re = 218, the symmetry seen at Re = 216 breaks down in one of the orthogonal planes while remains symmetric on the other thus showing a planar symmetry. The flow experiences a Hopf bifurcation at a Reynolds number between 265 and 270 and becomes unsteady. The thermal field also shows all the transitions same as those of flow transitions. The drag coefficient decreases while the heat transfer shows an increasing trend with Reynolds number. The transition from a steady to an unsteady flow does not show any significant increase in the heat transfer. Both the flow and thermal fields show multiple frequencies at high Reynolds number and the number of frequencies increases with the increase in Reynolds number. The instantaneous flow and temperature field are seen to deviate from planar symmetry at Re = 400

  8. Culture of three-dimensional tissue model and its application in bystander-effect research

    International Nuclear Information System (INIS)

    Wu Ruqun; Xu An; Wu Lijun; Hu Burong

    2012-01-01

    Compared with the cultured monolayer (2D) cells, three-dimensional (3D) tissue could be more similar to the environment in vivo including the physical support, chemical factors, cell-cell and cell-matrix interaction and so on. With the development of three-dimensional cell culture techniques (TDCC), 3D tissue is widely used in the areas of bystander effect research. This review focuses on introducing the TDCC method and its application in bystander-effect research. First, the development process of 3D tissue culture method was introduced. Secondly, the induction of radiation induced bystander effects both in 2D cell and 3D tissue and its mechanisms were reviewed. Finally, because heavy ion (carbon ion beam) has been developed as a useful tool to cure solid cancer, and the 3D tissue model is an ideal material to study the damages on body after being irradiated and to understand the underlying mechanisms, future study about heavy ion radiation inducing bystander effect in 3D tissue was discussed. (authors)

  9. Insulin as a model to teach three-dimensional structure of proteins

    Directory of Open Access Journals (Sweden)

    João Batista Teixeira da Rocha

    2018-02-01

    Proteins are the most ubiquitous macromolecules found in the living cells and have innumerous physiological functions. Therefore, it is fundamental to build a solid knowledge about the proteins three dimensional structure to better understand the living state. The hierarchical structure of proteins is usually studied in the undergraduate discipline of Biochemistry. Here we described pedagogical interventions designed to increase the preservice teacher chemistry students’ knowledge about protein structure. The activities were made using alternative and cheap materials to encourage the application of these simple methodologies by the future teachers in the secondary school. From the primary structure of insulin chains, students had to construct a three-dimensional structure of insulin. After the activities, the students highlighted an improvement of their previous knowledge about proteins structure. The construction of a tridimensional model together with other activities seems to be an efficient way to promote the learning about the structure of proteins to undergraduate students. The methodology used was inexpensiveness and simple and it can be used both in the university and in the high-school.

  10. Hydraulic performance numerical simulation of high specific speed mixed-flow pump based on quasi three-dimensional hydraulic design method

    International Nuclear Information System (INIS)

    Zhang, Y X; Su, M; Hou, H C; Song, P F

    2013-01-01

    This research adopts the quasi three-dimensional hydraulic design method for the impeller of high specific speed mixed-flow pump to achieve the purpose of verifying the hydraulic design method and improving hydraulic performance. Based on the two families of stream surface theory, the direct problem is completed when the meridional flow field of impeller is obtained by employing iterative calculation to settle the continuity and momentum equation of fluid. The inverse problem is completed by using the meridional flow field calculated in the direct problem. After several iterations of the direct and inverse problem, the shape of impeller and flow field information can be obtained finally when the result of iteration satisfies the convergent criteria. Subsequently the internal flow field of the designed pump are simulated by using RANS equations with RNG k-ε two-equation turbulence model. The static pressure and streamline distributions at the symmetrical cross-section, the vector velocity distribution around blades and the reflux phenomenon are analyzed. The numerical results show that the quasi three-dimensional hydraulic design method for high specific speed mixed-flow pump improves the hydraulic performance and reveal main characteristics of the internal flow of mixed-flow pump as well as provide basis for judging the rationality of the hydraulic design, improvement and optimization of hydraulic model

  11. Cell-free DNA in a three-dimensional spheroid cell culture model

    DEFF Research Database (Denmark)

    Aucamp, Janine; Calitz, Carlemi; Bronkhorst, Abel J.

    2017-01-01

    Background Investigating the biological functions of cell-free DNA (cfDNA) is limited by the interference of vast numbers of putative sources and causes of DNA release into circulation. Utilization of three-dimensional (3D) spheroid cell cultures, models with characteristics closer to the in vivo...... cultures can serve as effective, simplified in vivo-simulating “closed-circuit” models since putative sources of cfDNA are limited to only the targeted cells. In addition, cfDNA can also serve as an alternative or auxiliary marker for tracking spheroid growth, development and culture stability. Biological...... significance 3D cell cultures can be used to translate “closed-circuit” in vitro model research into data that is relevant for in vivo studies and clinical applications. In turn, the utilization of cfDNA during 3D culture research can optimize sample collection without affecting the stability of the growth...

  12. A simplified transient three-dimensional model for estimating the thermal performance of the vapor chambers

    International Nuclear Information System (INIS)

    Chen, Y.-S.; Chien, K.-H.; Wang, C.-C.; Hung, T.-C.; Pei, B.-S.

    2006-01-01

    The vapor chambers (flat plate heat pipes) have been applied on the electronic cooling recently. To satisfy the quick-response requirement of the industries, a simplified transient three-dimensional linear model has been developed and tested in this study. In the proposed model, the vapor is assumed as a single interface between the evaporator and condenser wicks, and this assumption enables the vapor chamber to be analyzed by being split into small control volumes. Comparing with the previous available results, the calculated transient responses have shown good agreements with the existing results. For further validation of the proposed model, a water-cooling experiment was conducted. In addition to the vapor chamber, the heating block is also taken into account in the simulation. It is found that the inclusion of the capacitance of heating block shows a better agreement with the measurements

  13. A Web-based Visualization System for Three Dimensional Geological Model using Open GIS

    Science.gov (United States)

    Nemoto, T.; Masumoto, S.; Nonogaki, S.

    2017-12-01

    A three dimensional geological model is an important information in various fields such as environmental assessment, urban planning, resource development, waste management and disaster mitigation. In this study, we have developed a web-based visualization system for 3D geological model using free and open source software. The system has been successfully implemented by integrating web mapping engine MapServer and geographic information system GRASS. MapServer plays a role of mapping horizontal cross sections of 3D geological model and a topographic map. GRASS provides the core components for management, analysis and image processing of the geological model. Online access to GRASS functions has been enabled using PyWPS that is an implementation of WPS (Web Processing Service) Open Geospatial Consortium (OGC) standard. The system has two main functions. Two dimensional visualization function allows users to generate horizontal and vertical cross sections of 3D geological model. These images are delivered via WMS (Web Map Service) and WPS OGC standards. Horizontal cross sections are overlaid on the topographic map. A vertical cross section is generated by clicking a start point and an end point on the map. Three dimensional visualization function allows users to visualize geological boundary surfaces and a panel diagram. The user can visualize them from various angles by mouse operation. WebGL is utilized for 3D visualization. WebGL is a web technology that brings hardware-accelerated 3D graphics to the browser without installing additional software. The geological boundary surfaces can be downloaded to incorporate the geologic structure in a design on CAD and model for various simulations. This study was supported by JSPS KAKENHI Grant Number JP16K00158.

  14. A mathematical model of collective cell migration in a three-dimensional, heterogeneous environment.

    Directory of Open Access Journals (Sweden)

    David P Stonko

    Full Text Available Cell migration is essential in animal development, homeostasis, and disease progression, but many questions remain unanswered about how this process is controlled. While many kinds of individual cell movements have been characterized, less effort has been directed towards understanding how clusters of cells migrate collectively through heterogeneous, cellular environments. To explore this, we have focused on the migration of the border cells during Drosophila egg development. In this case, a cluster of different cell types coalesce and traverse as a group between large cells, called nurse cells, in the center of the egg chamber. We have developed a new model for this collective cell migration based on the forces of adhesion, repulsion, migration and stochastic fluctuation to generate the movement of discrete cells. We implement the model using Identical Math Cells, or IMCs. IMCs can each represent one biological cell of the system, or can be aggregated using increased adhesion forces to model the dynamics of larger biological cells. The domain of interest is filled with IMCs, each assigned specific biophysical properties to mimic a diversity of cell types. Using this system, we have successfully simulated the migration of the border cell cluster through an environment filled with larger cells, which represent nurse cells. Interestingly, our simulations suggest that the forces utilized in this model are sufficient to produce behaviors of the cluster that are observed in vivo, such as rotation. Our framework was developed to capture a heterogeneous cell population, and our implementation strategy allows for diverse, but precise, initial position specification over a three- dimensional domain. Therefore, we believe that this model will be useful for not only examining aspects of Drosophila oogenesis, but also for modeling other two or three-dimensional systems that have multiple cell types and where investigating the forces between cells is of

  15. A mathematical model of collective cell migration in a three-dimensional, heterogeneous environment.

    Science.gov (United States)

    Stonko, David P; Manning, Lathiena; Starz-Gaiano, Michelle; Peercy, Bradford E

    2015-01-01

    Cell migration is essential in animal development, homeostasis, and disease progression, but many questions remain unanswered about how this process is controlled. While many kinds of individual cell movements have been characterized, less effort has been directed towards understanding how clusters of cells migrate collectively through heterogeneous, cellular environments. To explore this, we have focused on the migration of the border cells during Drosophila egg development. In this case, a cluster of different cell types coalesce and traverse as a group between large cells, called nurse cells, in the center of the egg chamber. We have developed a new model for this collective cell migration based on the forces of adhesion, repulsion, migration and stochastic fluctuation to generate the movement of discrete cells. We implement the model using Identical Math Cells, or IMCs. IMCs can each represent one biological cell of the system, or can be aggregated using increased adhesion forces to model the dynamics of larger biological cells. The domain of interest is filled with IMCs, each assigned specific biophysical properties to mimic a diversity of cell types. Using this system, we have successfully simulated the migration of the border cell cluster through an environment filled with larger cells, which represent nurse cells. Interestingly, our simulations suggest that the forces utilized in this model are sufficient to produce behaviors of the cluster that are observed in vivo, such as rotation. Our framework was developed to capture a heterogeneous cell population, and our implementation strategy allows for diverse, but precise, initial position specification over a three- dimensional domain. Therefore, we believe that this model will be useful for not only examining aspects of Drosophila oogenesis, but also for modeling other two or three-dimensional systems that have multiple cell types and where investigating the forces between cells is of interest.

  16. Three-dimensional geologic model of the southeastern Espanola Basin, Santa Fe County, New Mexico

    Science.gov (United States)

    Pantea, Michael P.; Hudson, Mark R.; Grauch, V.J.S.; Minor, Scott A.

    2011-01-01

    This multimedia model and report show and describe digital three-dimensional faulted surfaces and volumes of lithologic units that confine and constrain the basin-fill aquifers within the Espanola Basin of north-central New Mexico. These aquifers are the primary groundwater resource for the cities of Santa Fe and Espanola, six Pueblo nations, and the surrounding areas. The model presented in this report is a synthesis of geologic information that includes (1) aeromagnetic and gravity data and seismic cross sections; (2) lithologic descriptions, interpretations, and geophysical logs from selected drill holes; (3) geologic maps, geologic cross sections, and interpretations; and (4) mapped faults and interpreted faults from geophysical data. Modeled faults individually or collectively affect the continuity of the rocks that contain the basin aquifers; they also help define the form of this rift basin. Structure, trend, and dip data not previously published were added; these structures are derived from interpretations of geophysical information and recent field observations. Where possible, data were compared and validated and reflect the complex relations of structures in this part of the Rio Grande rift. This interactive geologic framework model can be used as a tool to visually explore and study geologic structures within the Espanola Basin, to show the connectivity of geologic units of high and low permeability between and across faults, and to show approximate dips of the lithologic units. The viewing software can be used to display other data and information, such as drill-hole data, within this geologic framework model in three-dimensional space.

  17. Magnetic properties of Hubbard-sigma model with three-dimensionality

    International Nuclear Information System (INIS)

    Yamamoto, Hisashi; Tatara, Gen; Ichinose, Ikuo; Matsui, Tetsuo.

    1990-05-01

    It has been broadly accepted that the magnetism may play an important role in the high-T c superconductivity in the lamellar CuO 2 materials. In this paper, based on a Hubbard-inspired CP 1 or S 2 nonlinear σ model, we give a quantitative study of some magnetic properties in and around the Neel ordered state of three-dimensional quantum antiferromagnets such as La 2 CuO 4 with and without small hole doping. Our model is a (3+1) dimensional effective field theory describing the low energy spin dynamics of a three-dimensional Hubbard model with a very weak interlayer coupling. The effect of hole dynamics is taken into account in the leading approximation by substituting the CP 1 coupling and the spin-wave velocity with 'effective' ones determined by the concentration and the one-loop correction of hole fermions. Stationary-phase equations for the one-loop effective potential of S 2 model are analyzed. Based on them, various magnetic properties of the system, such as the behavior of Neel temperature, spin correlation length, staggered magnetization, specific heat and susceptibility as functions of anisotropic parameter, temperature, etc. are investigated in detail. The results show that our anisotropic field theory model with certain values of parameters gives a good description of the magnetic properties in both the ordered and the disordered phases indicated by experiments on La 2 CuO 4 . The part of the above results is supported by the renormalization-group analysis. In the doped case it is observed that the existence of holes destroys the long-range order and their hopping effect is large. (author)

  18. Production of lightning NOx and its vertical distribution calculated from three-dimensional cloud-scale chemical transport model simulations

    KAUST Repository

    Ott, Lesley E.; Pickering, Kenneth E.; Stenchikov, Georgiy L.; Allen, Dale J.; DeCaria, Alex J.; Ridley, Brian; Lin, Ruei-Fong; Lang, Stephen; Tao, Wei-Kuo

    2010-01-01

    A three-dimensional (3-D) cloud-scale chemical transport model that includes a parameterized source of lightning NOx on the basis of observed flash rates has been used to simulate six midlatitude and subtropical thunderstorms observed during four

  19. The simulation of the transport of aircraft emissions by a three-dimensional global model

    Directory of Open Access Journals (Sweden)

    G. J. M. Velders

    1994-04-01

    Full Text Available A three-dimensional off-line tracer transport model coupled to the ECMWF analyses has been used to study the transport of trace gases in the atmosphere. The model gives a reasonable description of their general transport in the atmosphere. The simulation of the transport of aircraft emissions (as NOx has been studied as well as the transport of passive tracers injected at different altitudes in the North Atlantic flight corridor. A large zonal variation in the NOx concentrations as well as large seasonal and yearly variations was found. The altitude of the flight corridor influences the amount of tracers transported into the troposphere and stratosphere to a great extent.

  20. Three-Dimensional Cell Culture Models for Infectious Disease and Drug Development

    Science.gov (United States)

    Nickerson, Cheryl A.; Honer zu Bentrup, Kerstin; Ott, C. Mark

    2005-01-01

    Three-dimensional (3-D) cell cultures hold enormous potential to advance our understanding of infectious disease and to effectively translate basic cellular research into clinical applications. Using novel NASA bioreactor technology, the rotating wall vessel (RWV), we have engineered physiologically relevant 3-D human tissue culture models for infectious disease studies. The design of the RWV is based on the understanding that organs and tissues function in a 3-D environment, and that this 3-D architecture is critical for the differentiated form and function of tissues in vivo. The RWV provides large numbers of cells which are amenable to a wide variety of experimental manipulations and provides an easy, reproducible, and cost-effective approach to enhance differentiated features of cell culture models.

  1. Chiral spin liquids at finite temperature in a three-dimensional Kitaev model

    Science.gov (United States)

    Kato, Yasuyuki; Kamiya, Yoshitomo; Nasu, Joji; Motome, Yukitoshi

    2017-11-01

    Chiral spin liquids (CSLs) in three dimensions and thermal phase transitions to paramagnet are studied by unbiased Monte Carlo simulations. For an extension of the Kitaev model to a three-dimensional tricoordinate network dubbed the hypernonagon lattice, we derive low-energy effective models in two different anisotropic limits. We show that the effective interactions between the emergent Z2 degrees of freedom called fluxes are unfrustrated in one limit, while highly frustrated in the other. In both cases, we find a first-order phase transition to the CSL, where both time-reversal and parity symmetries are spontaneously broken. In the frustrated case, however, the CSL state is highly exotic—the flux configuration is subextensively degenerate while showing a directional order with broken C3 rotational symmetry. Our results provide two contrasting archetypes of CSLs in three dimensions, both of which allow approximation-free simulation for investigating the thermodynamics.

  2. Through-silicon-via crosstalk model and optimization design for three-dimensional integrated circuits

    International Nuclear Information System (INIS)

    Qian Li-Bo; Xia Yin-Shui; Zhu Zhang-Ming; Ding Rui-Xue; Yang Yin-Tang

    2014-01-01

    Through-silicon-via (TSV) to TSV crosstalk noise is one of the key factors affecting the signal integrity of three-dimensional integrated circuits (3D ICs). Based on the frequency dependent equivalent electrical parameters for the TSV channel, an analytical crosstalk noise model is established to capture the TSV induced crosstalk noise. The impact of various design parameters including insulation dielectric, via pitch, via height, silicon conductivity, and terminal impedance on the crosstalk noise is analyzed with the proposed model. Two approaches are proposed to alleviate the TSV noise, namely, driver sizing and via shielding, and the SPICE results show 241 mV and 379 mV reductions in the peak noise voltage, respectively

  3. Three-dimensional temperature field model of thermally decomposing resin composite irradiated by laser

    International Nuclear Information System (INIS)

    Chen Minsun; Jiang Houman; Liu Zejin

    2011-01-01

    Fundamental equations governing the temperature field of thermally decomposing resin composite irradiated by laser are derived from mass and energy conservation laws with the control Janume method. The thermal decomposition of resin is described by a multi-step model. An assumption is proposed that the flow of pyrolysis gas is one-dimensional, which makes it possible to consider the influence of pyrolysis gas convective transport and realize the closure of the three-dimensional model without introducing mechanical quantities. In view of the anisotropy of resin composite, expressions of the thermal conductivities of partially pyrolyzed material are deduced, as well as the computing formula for the laser absorption coefficient of partially pyrolyzed material. The energy conservation equation is consistent with reference under some simplifications. (authors)

  4. Gauge structure, anomalies and mass generation in a three dimensional thirring model

    International Nuclear Information System (INIS)

    Gomes, M.; Mendes, R.S.; Ribeiro, R.F.; Silva, A.J. da.

    1990-05-01

    We consider a three dimensional model of spinor fields with a Thirring like, quadrilinear self interaction. Using either two or four component Dirac spinors, we prove that the 1/N expansion for the model is renormalizable if a gauge structure to select physical quantities is introduced. For certain values of the coupling the leading 1/N approximation exihibits bound state poles. Dynamical breaking of parity or chiral symmetry is shown to occur as a cooperative effect of different orders of 1/N, if N is smaller than the critical value N c = 128 / x 2 D' , where D is two or four depending on wether the fermion field has two or four components. (author) [pt

  5. Modelling three-dimensional cochlear micromechanics within the guinea pig organ of Corti

    Science.gov (United States)

    Ni, Guangjian; Elliott, Stephen J.

    2018-05-01

    The active amplification process in the mammalian cochlea depends on a complex interaction between cells within the organ of Corti. A three-dimensional (3D) model was developed using the finite element method based on anatomy for the apical end in the guinea pig cochlea, which is comprised of 3D discrete hair cells, 3D continuous membranes and fluid. The basilar membrane, tectorial membrane and the reticular lamina are modelled with orthotropic materials. The Y-shape structures formed by the outer hair cell (OHC), the Deiters' cell and Deiters' cell phalangeal process are also included to account for the structural longitudinal coupling. The motion within the organ of Corti was first simulated in response to a pressure difference loading on the basilar membrane, in order to calculate the passive vibration pattern. Then, the outer hair cells somatic electromotility was implemented by applying a voltage across the OHC walls to investigate its contribution to membranes motion.

  6. Three-dimensional sound localisation with a lizard peripheral auditory model

    DEFF Research Database (Denmark)

    Kjær Schmidt, Michael; Shaikh, Danish

    the networks learned a transfer function that translated the three-dimensional non-linear mapping into estimated azimuth and elevation values for the acoustic target. The neural network with two hidden layers as expected performed better than that with only one hidden layer. Our approach assumes that for any...... location of an acoustic target in three dimensions. Our approach utilises a model of the peripheral auditory system of lizards [Christensen-Dalsgaard and Manley 2005] coupled with a multi-layer perceptron neural network. The peripheral auditory model’s response to sound input encodes sound direction...... information in a single plane which by itself is insufficient to localise the acoustic target in three dimensions. A multi-layer perceptron neural network is used to combine two independent responses of the model, corresponding to two rotational movements, into an estimate of the sound direction in terms...

  7. A geometrically exact formulation for three-dimensional numerical simulation of the umbilical cable in a deep-sea ROV system

    Science.gov (United States)

    Quan, Wei-cai; Zhang, Zhu-ying; Zhang, Ai-qun; Zhang, Qi-feng; Tian, Yu

    2015-04-01

    This paper proposes a geometrically exact formulation for three-dimensional static and dynamic analyses of the umbilical cable in a deep-sea remotely operated vehicle (ROV) system. The presented formulation takes account of the geometric nonlinearities of large displacement, effects of axial load and bending stiffness for modeling of slack cables. The resulting nonlinear second-order governing equations are discretized spatially by the finite element method and solved temporally by the generalized- α implicit time integration algorithm, which is adapted to the case of varying coefficient matrices. The ability to consider three-dimensional union action of ocean current and ship heave motion upon the umbilical cable is the key feature of this analysis. The presented formulation is firstly validated, and then three numerical examples for the umbilical cable in a deep-sea ROV system are demonstrated and discussed, including the steady configurations only under the action of depth-dependent ocean current, the dynamic responses in the case of the only ship heave motion, and in the case of the combined action of the ship heave motion and ocean current.

  8. Petroleum migration pathways and charge concentration: A three-dimensional model

    Energy Technology Data Exchange (ETDEWEB)

    Hindle, A.D. [Anadarko Algeria Corp., Middlesex (United Kingdom)

    1997-09-01

    Petroleum migration pathways through a basin are determined by the three-dimensional distribution of discontinuous sealing surfaces, which are usually parallel to bedding. The petroleum migrates below the sealing surface, taking the structurally most advantageous route. The three-dimensional distribution of migration pathways within the petroleum system can be modeled on a personal computer using a program based on the parameters discussed in this paper. Application of the model to the Paris and Williston basins demonstrates that a good correlation between predicted pathways and discovered accumulations can be made using simple models. Pathways form a dense network overlying generating areas in the central parts of basins. Toward the basin margins these routes commonly become increasingly focused into discrete pathways by the sealing-surface morphologies. Eventually, these pathways may reach the surface as seepages. It is important to integrate surface outcrops of migration routes (surface seepages) into migration modeling. Deflection of the pathways from the structurally most advantageous route below the sealing surface may be caused by lateral sealing barriers due to faces variation in the carrier rock below the seal, fault juxtaposition, or cross-formational seals such as salt intrusions. Deflection of pathways also occurs where there are hydrodynamic conditions in response to topography-driven groundwater flow. Zones of vertical migration are associated with facies changes along the horizon of the sealing surface into a nonsealing facies, or juxtaposition to nonsealing strata by faults. Vertical migration from either normally or abnormally pressured strata is most likely to occur into normally or lesser pressured strata at intrabasinal highs where hydrocarbons can be stored and transferred at times of temporary seal rupture.

  9. Slab1.0: A three-dimensional model of global subduction zone geometries

    Science.gov (United States)

    Hayes, Gavin P.; Wald, David J.; Johnson, Rebecca L.

    2012-01-01

    We describe and present a new model of global subduction zone geometries, called Slab1.0. An extension of previous efforts to constrain the two-dimensional non-planar geometry of subduction zones around the focus of large earthquakes, Slab1.0 describes the detailed, non-planar, three-dimensional geometry of approximately 85% of subduction zones worldwide. While the model focuses on the detailed form of each slab from their trenches through the seismogenic zone, where it combines data sets from active source and passive seismology, it also continues to the limits of their seismic extent in the upper-mid mantle, providing a uniform approach to the definition of the entire seismically active slab geometry. Examples are shown for two well-constrained global locations; models for many other regions are available and can be freely downloaded in several formats from our new Slab1.0 website, http://on.doi.gov/d9ARbS. We describe improvements in our two-dimensional geometry constraint inversion, including the use of ‘average’ active source seismic data profiles in the shallow trench regions where data are otherwise lacking, derived from the interpolation between other active source seismic data along-strike in the same subduction zone. We include several analyses of the uncertainty and robustness of our three-dimensional interpolation methods. In addition, we use the filtered, subduction-related earthquake data sets compiled to build Slab1.0 in a reassessment of previous analyses of the deep limit of the thrust interface seismogenic zone for all subduction zones included in our global model thus far, concluding that the width of these seismogenic zones is on average 30% larger than previous studies have suggested.

  10. Nighttime Foreground Pedestrian Detection Based on Three-Dimensional Voxel Surface Model

    Directory of Open Access Journals (Sweden)

    Jing Li

    2017-10-01

    Full Text Available Pedestrian detection is among the most frequently-used preprocessing tasks in many surveillance application fields, from low-level people counting to high-level scene understanding. Even though many approaches perform well in the daytime with sufficient illumination, pedestrian detection at night is still a critical and challenging problem for video surveillance systems. To respond to this need, in this paper, we provide an affordable solution with a near-infrared stereo network camera, as well as a novel three-dimensional foreground pedestrian detection model. Specifically, instead of using an expensive thermal camera, we build a near-infrared stereo vision system with two calibrated network cameras and near-infrared lamps. The core of the system is a novel voxel surface model, which is able to estimate the dynamic changes of three-dimensional geometric information of the surveillance scene and to segment and locate foreground pedestrians in real time. A free update policy for unknown points is designed for model updating, and the extracted shadow of the pedestrian is adopted to remove foreground false alarms. To evaluate the performance of the proposed model, the system is deployed in several nighttime surveillance scenes. Experimental results demonstrate that our method is capable of nighttime pedestrian segmentation and detection in real time under heavy occlusion. In addition, the qualitative and quantitative comparison results show that our work outperforms classical background subtraction approaches and a recent RGB-D method, as well as achieving comparable performance with the state-of-the-art deep learning pedestrian detection method even with a much lower hardware cost.

  11. Nighttime Foreground Pedestrian Detection Based on Three-Dimensional Voxel Surface Model.

    Science.gov (United States)

    Li, Jing; Zhang, Fangbing; Wei, Lisong; Yang, Tao; Lu, Zhaoyang

    2017-10-16

    Pedestrian detection is among the most frequently-used preprocessing tasks in many surveillance application fields, from low-level people counting to high-level scene understanding. Even though many approaches perform well in the daytime with sufficient illumination, pedestrian detection at night is still a critical and challenging problem for video surveillance systems. To respond to this need, in this paper, we provide an affordable solution with a near-infrared stereo network camera, as well as a novel three-dimensional foreground pedestrian detection model. Specifically, instead of using an expensive thermal camera, we build a near-infrared stereo vision system with two calibrated network cameras and near-infrared lamps. The core of the system is a novel voxel surface model, which is able to estimate the dynamic changes of three-dimensional geometric information of the surveillance scene and to segment and locate foreground pedestrians in real time. A free update policy for unknown points is designed for model updating, and the extracted shadow of the pedestrian is adopted to remove foreground false alarms. To evaluate the performance of the proposed model, the system is deployed in several nighttime surveillance scenes. Experimental results demonstrate that our method is capable of nighttime pedestrian segmentation and detection in real time under heavy occlusion. In addition, the qualitative and quantitative comparison results show that our work outperforms classical background subtraction approaches and a recent RGB-D method, as well as achieving comparable performance with the state-of-the-art deep learning pedestrian detection method even with a much lower hardware cost.

  12. Application of Steenbeck's minimum principle for three-dimensional modelling of DC arc plasma torches

    International Nuclear Information System (INIS)

    Li Heping; Pfender, E; Chen, Xi

    2003-01-01

    In this paper, physical/mathematical models for the three-dimensional, quasi-steady modelling of the plasma flow and heat transfer inside a non-transferred DC arc plasma torch are described in detail. The Steenbeck's minimum principle (Finkelnburg W and Maecker H 1956 Electric arcs and thermal plasmas Encyclopedia of Physics vol XXII (Berlin: Springer)) is employed to determine the axial position of the anode arc-root at the anode surface. This principle postulates a minimum arc voltage for a given arc current, working gas flow rate, and torch configuration. The modelling results show that the temperature and flow fields inside the DC non-transferred arc plasma torch show significant three-dimensional features. The predicted anode arc-root attachment position and the arc shape by employing Steenbeck's minimum principle are reasonably consistent with experimental observations. The thermal efficiency and the torch power distribution are also calculated in this paper. The results show that the thermal efficiency of the torch always ranges from 30% to 45%, i.e. more than half of the total power input is taken away by the cathode and anode cooling water. The special heat transfer mechanisms at the plasma-anode interface, such as electron condensation, electron enthalpy and radiative heat transfer from the bulk plasma to the anode inner surface, are taken into account in this paper. The calculated results show that besides convective heat transfer, the contributions of electron condensation, electron enthalpy and radiation to the anode heat transfer are also important (∼30% for parameter range of interest in this paper). Additional effects, such as the non-local thermodynamic equilibrium plasma state near the electrodes, the transient phenomena, etc, need to be considered in future physical/mathematical models, including corresponding measurements

  13. Towards Tuning the Mechanical Properties of Three-Dimensional Collagen Scaffolds Using a Coupled Fiber-Matrix Model

    Directory of Open Access Journals (Sweden)

    Shengmao Lin

    2015-08-01

    Full Text Available Scaffold mechanical properties are essential in regulating the microenvironment of three-dimensional cell culture. A coupled fiber-matrix numerical model was developed in this work for predicting the mechanical response of collagen scaffolds subjected to various levels of non-enzymatic glycation and collagen concentrations. The scaffold was simulated by a Voronoi network embedded in a matrix. The computational model was validated using published experimental data. Results indicate that both non-enzymatic glycation-induced matrix stiffening and fiber network density, as regulated by collagen concentration, influence scaffold behavior. The heterogeneous stress patterns of the scaffold were induced by the interfacial mechanics between the collagen fiber network and the matrix. The knowledge obtained in this work could help to fine-tune the mechanical properties of collagen scaffolds for improved tissue regeneration applications.

  14. Numerical Simulation of a Lee Wave Case over Three-Dimensional Mountainous Terrain under Strong Wind Condition

    Directory of Open Access Journals (Sweden)

    Lei Li

    2013-01-01

    Full Text Available This study of a lee wave event over three-dimensional (3D mountainous terrain in Lantau Island, Hong Kong, using a simulation combining mesoscale model and computational fluid dynamics (CFD model has shown that (1 3D steep mountainous terrain can trigger small scale lee waves under strong wind condition, and the horizontal extent of the wave structure is in a dimension of few kilometers and corresponds to the dimension of the horizontal cross-section of the mountain; (2 the life cycle of the lee wave is short, and the wave structures will continuously form roughly in the same location, then gradually move downstream, and dissipate over time; (3 the lee wave triggered by the mountainous terrain in this case can be categorized into “nonsymmetric vortex shedding” or “turbulent wake,” as defined before based on water tank experiments; (4 the magnitude of the wave is related to strength of wind shear. This study also shows that a simulation combining mesoscale model and CFD can capture complex wave structure in the boundary layer over realistic 3D steep terrain, and have a potential value for operational jobs on air traffic warning, wind energy utilization, and atmospheric environmental assessment.

  15. On a model of three-dimensional bursting and its parallel implementation

    Science.gov (United States)

    Tabik, S.; Romero, L. F.; Garzón, E. M.; Ramos, J. I.

    2008-04-01

    A mathematical model for the simulation of three-dimensional bursting phenomena and its parallel implementation are presented. The model consists of four nonlinearly coupled partial differential equations that include fast and slow variables, and exhibits bursting in the absence of diffusion. The differential equations have been discretized by means of a second-order accurate in both space and time, linearly-implicit finite difference method in equally-spaced grids. The resulting system of linear algebraic equations at each time level has been solved by means of the Preconditioned Conjugate Gradient (PCG) method. Three different parallel implementations of the proposed mathematical model have been developed; two of these implementations, i.e., the MPI and the PETSc codes, are based on a message passing paradigm, while the third one, i.e., the OpenMP code, is based on a shared space address paradigm. These three implementations are evaluated on two current high performance parallel architectures, i.e., a dual-processor cluster and a Shared Distributed Memory (SDM) system. A novel representation of the results that emphasizes the most relevant factors that affect the performance of the paralled implementations, is proposed. The comparative analysis of the computational results shows that the MPI and the OpenMP implementations are about twice more efficient than the PETSc code on the SDM system. It is also shown that, for the conditions reported here, the nonlinear dynamics of the three-dimensional bursting phenomena exhibits three stages characterized by asynchronous, synchronous and then asynchronous oscillations, before a quiescent state is reached. It is also shown that the fast system reaches steady state in much less time than the slow variables.

  16. Lumped versus distributed thermoregulatory control: results from a three-dimensional dynamic model.

    Science.gov (United States)

    Werner, J; Buse, M; Foegen, A

    1989-01-01

    In this study we use a three-dimensional model of the human thermal system, the spatial grid of which is 0.5 ... 1.0 cm. The model is based on well-known physical heat-transfer equations, and all parameters of the passive system have definite physical values. According to the number of substantially different areas and organs, 54 spatially different values are attributed to each physical parameter. Compatibility of simulation and experiment was achieved solely on the basis of physical considerations and physiological basic data. The equations were solved using a modification of the alternating direction implicit method. On the basis of this complex description of the passive system close to reality, various lumped and distributed parameter control equations were tested for control of metabolic heat production, blood flow and sweat production. The simplest control equations delivering results on closed-loop control compatible with experimental evidence were determined. It was concluded that it is essential to take into account the spatial distribution of heat production, blood flow and sweat production, and that at least for control of shivering, distributed controller gains different from the pattern of distribution of muscle tissue are required. For sweat production this is not so obvious, so that for simulation of sweating control after homogeneous heat load a lumped parameter control may be justified. Based on these conclusions three-dimensional temperature profiles for cold and heat load and the dynamics for changes of the environmental conditions were computed. In view of the exact simulation of the passive system and the compatibility with experimentally attainable variables there is good evidence that those values extrapolated by the simulation are adequately determined. The model may be used both for further analysis of the real thermoregulatory mechanisms and for special applications in environmental and clinical health care.

  17. Three-Dimensional Soil Landscape Modeling: A Potential Earth Science Teaching Tool

    Science.gov (United States)

    Schmid, Brian M.; Manu, Andrew; Norton, Amy E.

    2009-01-01

    Three-dimensional visualization is helpful in understanding soils, and three dimensional (3-D) tools are gaining popularity in teaching earth sciences. Those tools are still somewhat underused in soil science, yet soil properties such as texture, color, and organic carbon content vary both vertically and horizontally across the landscape. These…

  18. Production of accurate skeletal models of domestic animals using three-dimensional scanning and printing technology.

    Science.gov (United States)

    Li, Fangzheng; Liu, Chunying; Song, Xuexiong; Huan, Yanjun; Gao, Shansong; Jiang, Zhongling

    2018-01-01

    Access to adequate anatomical specimens can be an important aspect in learning the anatomy of domestic animals. In this study, the authors utilized a structured light scanner and fused deposition modeling (FDM) printer to produce highly accurate animal skeletal models. First, various components of the bovine skeleton, including the femur, the fifth rib, and the sixth cervical (C6) vertebra were used to produce digital models. These were then used to produce 1:1 scale physical models with the FDM printer. The anatomical features of the digital models and three-dimensional (3D) printed models were then compared with those of the original skeletal specimens. The results of this study demonstrated that both digital and physical scale models of animal skeletal components could be rapidly produced using 3D printing technology. In terms of accuracy between models and original specimens, the standard deviations of the femur and the fifth rib measurements were 0.0351 and 0.0572, respectively. All of the features except the nutrient foramina on the original bone specimens could be identified in the digital and 3D printed models. Moreover, the 3D printed models could serve as a viable alternative to original bone specimens when used in anatomy education, as determined from student surveys. This study demonstrated an important example of reproducing bone models to be used in anatomy education and veterinary clinical training. Anat Sci Educ 11: 73-80. © 2017 American Association of Anatomists. © 2017 American Association of Anatomists.

  19. A recapitulative three-dimensional model of breast carcinoma requires perfusion for multi-week growth

    Directory of Open Access Journals (Sweden)

    Kayla F Goliwas

    2016-07-01

    Full Text Available Breast carcinomas are complex, three-dimensional tissues composed of cancer epithelial cells and stromal components, including fibroblasts and extracellular matrix. In vitro models that more faithfully recapitulate this dimensionality and stromal microenvironment should more accurately elucidate the processes driving carcinogenesis, tumor progression, and therapeutic response. Herein, novel in vitro breast carcinoma surrogates, distinguished by a relevant dimensionality and stromal microenvironment, are described and characterized. A perfusion bioreactor system was used to deliver medium to surrogates containing engineered microchannels and the effects of perfusion, medium composition, and the method of cell incorporation and density of initial cell seeding on the growth and morphology of surrogates were assessed. Perfused surrogates demonstrated significantly greater cell density and proliferation and were more histologically recapitulative of human breast carcinoma than surrogates maintained without perfusion. Although other parameters of the surrogate system, such as medium composition and cell seeding density, affected cell growth, perfusion was the most influential parameter.

  20. Partial molar volume of proteins studied by the three-dimensional reference interaction site model theory.

    Science.gov (United States)

    Imai, Takashi; Kovalenko, Andriy; Hirata, Fumio

    2005-04-14

    The three-dimensional reference interaction site model (3D-RISM) theory is applied to the analysis of hydration effects on the partial molar volume of proteins. For the native structure of some proteins, the partial molar volume is decomposed into geometric and hydration contributions using the 3D-RISM theory combined with the geometric volume calculation. The hydration contributions are correlated with the surface properties of the protein. The thermal volume, which is the volume of voids around the protein induced by the thermal fluctuation of water molecules, is directly proportional to the accessible surface area of the protein. The interaction volume, which is the contribution of electrostatic interactions between the protein and water molecules, is apparently governed by the charged atomic groups on the protein surface. The polar atomic groups do not make any contribution to the interaction volume. The volume differences between low- and high-pressure structures of lysozyme are also analyzed by the present method.

  1. Meson form factors and covariant three-dimensional formulation of composite model

    International Nuclear Information System (INIS)

    Skachkov, N.B.; Solovtsov, I.L.

    1978-01-01

    An approach is developed which is applied in the framework of the relativistic quark model to obtain explicit expressions for meson form factors in terms of covariant wave functions of the two-quark system. These wave functions obey the two-particle quasipotential equation in which the relative motion of quarks is singled out in a covariant way. The exact form of the wave functions is found using the transition to the relativistic configurational representation with the help of the harmonic analysis on the Lorentz group instead of the usual Fourier expansion and then solving the relativistic difference equation thus obtained. The expressions found for form factors are transformed into the three-dimensional covariant form which is a direct geometrical relativistic generalization of analogous expressions of the nonrelativistic quantum mechanics and provides the decrease of the meson form factor by the Fsub(π)(t) approximately t -1 law as -t infinity, in the Coulomb field

  2. Three-dimensional modeling of capsule implosions in OMEGA tetrahedral hohlraums

    International Nuclear Information System (INIS)

    Schnittman, J. D.; Craxton, R. S.

    2000-01-01

    Tetrahedral hohlraums have been proposed as a means for achieving the highly uniform implosions needed for ignition with inertial confinement fusion (ICF) [J. D. Schnittman and R. S. Craxton, Phys. Plasmas 3, 3786 (1996)]. Recent experiments on the OMEGA laser system have achieved good drive uniformity consistent with theoretical predictions [J. M. Wallace et al., Phys. Rev. Lett. 82, 3807 (1999)]. To better understand these experiments and future investigations of high-convergence ICF implosions, the three-dimensional (3-D) view-factor code BUTTERCUP has been expanded to model the time-dependent radiation transport in the hohlraum and the hydrodynamic implosion of the capsule. Additionally, a 3-D postprocessor has been written to simulate x-ray images of the imploded core. Despite BUTTERCUP's relative simplicity, its predictions for radiation drive temperatures, fusion yields, and core deformation show close agreement with experiment. (c) 2000 American Institute of Physics

  3. Three-dimensional modeling of beam emission spectroscopy measurements in fusion plasmas

    Energy Technology Data Exchange (ETDEWEB)

    Guszejnov, D.; Pokol, G. I. [Department of Nuclear Techniques, Budapest University of Technology and Economics, Association EURATOM, H-1111 Budapest (Hungary); Pusztai, I. [Nuclear Engineering, Applied Physics, Chalmers University of Technology, SE-412 96 Goeteborg (Sweden); Refy, D.; Zoletnik, S. [MTA Wigner FK RMI, Association EURATOM, Pf. 49, H-1525 Budapest (Hungary); Lampert, M. [Department of Nuclear Techniques, Budapest University of Technology and Economics, Association EURATOM, H-1111 Budapest (Hungary); MTA Wigner FK RMI, Association EURATOM, Pf. 49, H-1525 Budapest (Hungary); Nam, Y. U. [National Fusion Research Institute, Gwahangno 113, Daejeon 305-333 (Korea, Republic of)

    2012-11-15

    One of the main diagnostic tools for measuring electron density profiles and the characteristics of long wavelength turbulent wave structures in fusion plasmas is beam emission spectroscopy (BES). The increasing number of BES systems necessitated an accurate and comprehensive simulation of BES diagnostics, which in turn motivated the development of the Rate Equations for Neutral Alkali-beam TEchnique (RENATE) simulation code that is the topic of this paper. RENATE is a modular, fully three-dimensional code incorporating all key features of BES systems from the atomic physics to the observation, including an advanced modeling of the optics. Thus RENATE can be used both in the interpretation of measured signals and the development of new BES systems. The most important components of the code have been successfully benchmarked against other simulation codes. The primary results have been validated against experimental data from the KSTAR tokamak.

  4. Nonasymptotic form of the recursion relations of the three-dimensional Ising model

    International Nuclear Information System (INIS)

    Kozlovskii, M.P.

    1989-01-01

    Approximate recursion relations for the three-dimensional Ising model are obtained in the form of rapidly converging series. The representation of the recursion relations in the form of nonasymptotic series entails the abandonment of traditional perturbation theory based on a Gaussian measure density. The recursion relations proposed in the paper are used to calculate the critical exponent ν of the correlation length. It is shown that the difference form of the recursion relations leads, when higher non-Gaussian basis measures are used, to disappearance of a dependence of the critical exponent ν on s when s > 2 (s is the parameter of the division of the phase space into layers). The obtained results make it possible to calculate explicit expressions for the thermodynamic functions near the phase transition point

  5. Three-dimensional finite element modelling of the uniaxial tension test

    DEFF Research Database (Denmark)

    Østergaard, Lennart; Stang, Henrik

    2002-01-01

    . One of the most direct methods for determination of the σ-w relationship is the uniaxial tension test, where a notched specimen is pulled apart while the tensile load and the crack opening displacement is observed. This method is appealing since the interpretation is straightforward. The method......Experimental determination of the stress-crack opening relationship (σ-w) for concrete as defined in the fictitious crack model has proven to be difficult. This is due to the problems that may arise from application of the inverse analysis method necessary for the derivation of the relationship...... is examined in this paper through three dimensional finite element analyses. It is concluded that the interpretation of the uniaxial tension test is indeed straightforward, if the testing machine stiffness is sufficiently high....

  6. THREE-DIMENSIONAL MODELING TOOLS IN THE PROCESS OF FORMATION OF GRAPHIC COMPETENCE OF THE FUTURE BACHELOR OF COMPUTER SCIENCE

    Directory of Open Access Journals (Sweden)

    Kateryna P. Osadcha

    2017-12-01

    Full Text Available The article is devoted to some aspects of the formation of future bachelor's graphic competence in computer sciences while teaching the fundamentals for working with three-dimensional modelling means. The analysis, classification and systematization of three-dimensional modelling means are given. The aim of research consists in investigating the set of instruments and classification of three-dimensional modelling means and correlation of skills, which are being formed, concerning inquired ones at the labour market in order to use them further in the process of forming graphic competence during training future bachelors in computer sciences. The peculiarities of the process of forming future bachelor's graphic competence in computer sciences by means of revealing, analyzing and systematizing three-dimensional modelling means and types of three-dimensional graphics at present stage of the development of informational technologies are traced a line round. The result of the research is a soft-ware choice in three-dimensional modelling for the process of training future bachelors in computer sciences.

  7. Development of three-dimensional brain arteriovenous malformation model for patient communication and young neurosurgeon education.

    Science.gov (United States)

    Dong, Mengqi; Chen, Guangzhong; Qin, Kun; Ding, Xiaowen; Zhou, Dong; Peng, Chao; Zeng, Shaojian; Deng, Xianming

    2018-01-15

    Rapid prototyping technology is used to fabricate three-dimensional (3D) brain arteriovenous malformation (AVM) models and facilitate presurgical patient communication and medical education for young surgeons. Two intracranial AVM cases were selected for this study. Using 3D CT angiography or 3D rotational angiography images, the brain AVM models were reconstructed on personal computer and the rapid prototyping process was completed using a 3D printer. The size and morphology of the models were compared to brain digital subtraction arteriography of the same patients. 3D brain AVM models were used for preoperative patient communication and young neurosurgeon education. Two brain AVM models were successfully produced. By neurosurgeons' evaluation, the printed models have high fidelity with the actual brain AVM structures of the patients. The patient responded positively toward the brain AVM model specific to himself. Twenty surgical residents from residency programs tested the brain AVM models and provided positive feedback on their usefulness as educational tool and resemblance to real brain AVM structures. Patient-specific 3D printed models of brain AVM can be constructed with high fidelity. 3D printed brain AVM models are proved to be helpful in preoperative patient consultation, surgical planning and resident training.

  8. Three-dimensional simulations of Bingham plastic flows with the multiple-relaxation-time lattice Boltzmann model

    Directory of Open Access Journals (Sweden)

    Song-Gui Chen

    2016-01-01

    Full Text Available This paper presents a three-dimensional (3D parallel multiple-relaxation-time lattice Boltzmann model (MRT-LBM for Bingham plastics which overcomes numerical instabilities in the simulation of non-Newtonian fluids for the Bhatnagar–Gross–Krook (BGK model. The MRT-LBM and several related mathematical models are briefly described. Papanastasiou’s modified model is incorporated for better numerical stability. The impact of the relaxation parameters of the model is studied in detail. The MRT-LBM is then validated through a benchmark problem: a 3D steady Poiseuille flow. The results from the numerical simulations are consistent with those derived analytically which indicates that the MRT-LBM effectively simulates Bingham fluids but with better stability. A parallel MRT-LBM framework is introduced, and the parallel efficiency is tested through a simple case. The MRT-LBM is shown to be appropriate for parallel implementation and to have high efficiency. Finally, a Bingham fluid flowing past a square-based prism with a fixed sphere is simulated. It is found the drag coefficient is a function of both Reynolds number (Re and Bingham number (Bn. These results reveal the flow behavior of Bingham plastics.

  9. Numerical simulation of L.E.L. in Compton regime. Part II, GONDOLE, a three-dimensional code

    International Nuclear Information System (INIS)

    Deck, D.

    1992-07-01

    In the first part of this report, the BIWI two-dimensional numerical simulation code of L.E.L. in Compton regime has been described; the question was to simulate L.E.L. experiments in 'optical mode', that is to say for wavelengths of the order of one micron. The axisymmetric cylindrical geometry (r,z) of the BIWI code is adapted to these experiments. However, the increasingly frequent use of L.E.L. in the regime of microwaves requires the presence of a waveguide within the inverter, which breaks the cylindrical symmetry and forces us to adopt another geometry. On the other hand, the desire to take into account fields of inverters having a gradient in the direction transverse to the direction of propagation of the beam, and thus allowing various focalizations (quadrupole, parabolic, etc.), leads to work in Cartesian geometry. For these reasons (and for others that will appear later), the GONDOLE code has been written and is described in this note. The Gondole code is three-dimensional (x, y, z) and allows to simulate a large variety of L.E.L experiences. Then, all the inverter fields that the GONDOLE code takes into account are introduced. These fields are responsible for the existence of a current J(vector) perpendicular to the Z axis of propagation, and source of radiation. The dynamics of the electrons is then deduced, which derives directly from these fields, and it is shown to which equations of propagation of the laser wave each different J(vector) is coupling [fr

  10. Three dimensional numerical study of different parameters effect on the external magnetic field applied to center the arc of the horizontal mercury discharge lamp

    Directory of Open Access Journals (Sweden)

    Mohamed Bechir Ben Hamida

    2015-10-01

    Full Text Available The aim of this paper is to evaluate the magnitude of the external magnetic field to be applied to a horizontal mercury discharge lamp such that the Lorentz forces counterbalance buoyancy forces and the hot region of the arc remains centered inside the lamp with the variation of six parameters of the lamp such as the external temperature of the lamp, envelope thickness, convective loss, Interelectrodeslength, pressure and current supply pointing to the influence of the parameters to the compensating magnetic field value. To achieve this objective, a commercial numerical software “Comsol Multiphysics” is used to implement the model that solves the equations of mass, energy and momentum for laminar compressible flow combined with the Laplace equation for the plasma in a three dimensional.

  11. Numerical simulation of an excited round jet under helical disturbances by three-dimensional discrete vortex method; Helical kakuran ni yoru reiki enkei funryu no uzuho simulation

    Energy Technology Data Exchange (ETDEWEB)

    Izawa, S.; Kiya, M.; Mochizuki, O. [Hokkaido University, Sapporo (Japan)

    1998-09-25

    The evolution of vortical structure in an impulsively started round jet has been studied numerically by means of a three-dimensional vortex blob method. The viscous diffusion of vorticity is approximated by a core spreading model originally proposed by Leonard (1980). The jet is forced by axisymmetric, helical and multiple disturbances. The multiple disturbances are combinations of two helical disturbances of the same mode rotating in the opposite directions. The multiple disturbances are found to enhance both the generation of small-scale structures and the growth rate of the jet. The small-scale structures have highly organized spatial distributions. The core spreading method is effective in aquiring the core overlapping in regions of high extensional rate of strain. 21 refs., 12 figs.

  12. Implicit Three-Dimensional Geo-Modelling Based on HRBF Surface

    Science.gov (United States)

    Gou, J.; Zhou, W.; Wu, L.

    2016-10-01

    Three-dimensional (3D) geological models are important representations of the results of regional geological surveys. However, the process of constructing 3D geological models from two-dimensional (2D) geological elements remains difficult and time-consuming. This paper proposes a method of migrating from 2D elements to 3D models. First, the geological interfaces were constructed using the Hermite Radial Basis Function (HRBF) to interpolate the boundaries and attitude data. Then, the subsurface geological bodies were extracted from the spatial map area using the Boolean method between the HRBF surface and the fundamental body. Finally, the top surfaces of the geological bodies were constructed by coupling the geological boundaries to digital elevation models. Based on this workflow, a prototype system was developed, and typical geological structures (e.g., folds, faults, and strata) were simulated. Geological modes were constructed through this workflow based on realistic regional geological survey data. For extended applications in 3D modelling of other kinds of geo-objects, mining ore body models and urban geotechnical engineering stratum models were constructed by this method from drill-hole data. The model construction process was rapid, and the resulting models accorded with the constraints of the original data.

  13. Modeling extreme (Carrington-type) space weather events using three-dimensional MHD code simulations

    Science.gov (United States)

    Ngwira, C. M.; Pulkkinen, A. A.; Kuznetsova, M. M.; Glocer, A.

    2013-12-01

    There is growing concern over possible severe societal consequences related to adverse space weather impacts on man-made technological infrastructure and systems. In the last two decades, significant progress has been made towards the modeling of space weather events. Three-dimensional (3-D) global magnetohydrodynamics (MHD) models have been at the forefront of this transition, and have played a critical role in advancing our understanding of space weather. However, the modeling of extreme space weather events is still a major challenge even for existing global MHD models. In this study, we introduce a specially adapted University of Michigan 3-D global MHD model for simulating extreme space weather events that have a ground footprint comparable (or larger) to the Carrington superstorm. Results are presented for an initial simulation run with ``very extreme'' constructed/idealized solar wind boundary conditions driving the magnetosphere. In particular, we describe the reaction of the magnetosphere-ionosphere system and the associated ground induced geoelectric field to such extreme driving conditions. We also discuss the results and what they might mean for the accuracy of the simulations. The model is further tested using input data for an observed space weather event to verify the MHD model consistence and to draw guidance for future work. This extreme space weather MHD model is designed specifically for practical application to the modeling of extreme geomagnetically induced electric fields, which can drive large currents in earth conductors such as power transmission grids.

  14. Construction of a three-dimensional interactive model of the skull base and cranial nerves.

    Science.gov (United States)

    Kakizawa, Yukinari; Hongo, Kazuhiro; Rhoton, Albert L

    2007-05-01

    The goal was to develop an interactive three-dimensional (3-D) computerized anatomic model of the skull base for teaching microneurosurgical anatomy and for operative planning. The 3-D model was constructed using commercially available software (Maya 6.0 Unlimited; Alias Systems Corp., Delaware, MD), a personal computer, four cranial specimens, and six dry bones. Photographs from at least two angles of the superior and lateral views were imported to the 3-D software. Many photographs were needed to produce the model in anatomically complex areas. Careful dissection was needed to expose important structures in the two views. Landmarks, including foramen, bone, and dura mater, were used as reference points. The 3-D model of the skull base and related structures was constructed using more than 300,000 remodeled polygons. The model can be viewed from any angle. It can be rotated 360 degrees in any plane using any structure as the focal point of rotation. The model can be reduced or enlarged using the zoom function. Variable transparencies could be assigned to any structures so that the structures at any level can be seen. Anatomic labels can be attached to the structures in the 3-D model for educational purposes. This computer-generated 3-D model can be observed and studied repeatedly without the time limitations and stresses imposed by surgery. This model may offer the potential to create interactive surgical exercises useful in evaluating multiple surgical routes to specific target areas in the skull base.

  15. Numerical Simulation of Three-Dimensional Flow Through Full Passage and Performance Prediction of Nuclear Reactor Coolant Pump

    International Nuclear Information System (INIS)

    Li Ying; Zhou Wenxia; Zhang Jige; Wang Dezhong

    2009-01-01

    In order to achieve the level of self-design and domestic manufacture of the reactor coolant pump (nuclear main pump), the software FLUENT was used to simulate the three-dimensional flow through full passage of one nuclear main pump basing on RNG κ-ε turbulence model and SIMPLE algorithm. The distribution of pressure and velocity of the flow in the impeller's surface was analyzed in different working conditions. Moreover, the performance of the pump was predicted based on the simulation results. The results show that the distributions of pressure and velocity are reasonable in both the working and back face of the blade in the steady working condition. The pressure of the flow is increased from the inlet to the outlet of the pump, and shows the maximal value in the impeller region. Comparatively satisfactory efficiency and head value were obtained in the condition of the pump design. The shaft power of the nuclear main pump is gradually increased with the increase of the flow flux. These results are helpful in understanding the change of the internal flow field in the nuclear main pump, which is of some importance for the pre-exploration and theoretical research on the domestic manufacture of the nuclear main pump. (authors)

  16. A three-dimensional finite element model for biomechanical analysis of the hip.

    Science.gov (United States)

    Chen, Guang-Xing; Yang, Liu; Li, Kai; He, Rui; Yang, Bin; Zhan, Yan; Wang, Zhi-Jun; Yu, Bing-Nin; Jian, Zhe

    2013-11-01

    The objective of this study was to construct a three-dimensional (3D) finite element model of the hip. The images of the hip were obtained from Chinese visible human dataset. The hip model includes acetabular bone, cartilage, labrum, and bone. The cartilage of femoral head was constructed using the AutoCAD and Solidworks software. The hip model was imported into ABAQUS analysis system. The contact surface of the hip joint was meshed. To verify the model, the single leg peak force was loaded, and contact area of the cartilage and labrum of the hip and pressure distribution in these structures were observed. The constructed 3D hip model reflected the real hip anatomy. Further, this model reflected biomechanical behavior similar to previous studies. In conclusion, this 3D finite element hip model avoids the disadvantages of other construction methods, such as imprecision of cartilage construction and the absence of labrum. Further, it provides basic data critical for accurately modeling normal and abnormal loads, and the effects of abnormal loads on the hip.

  17. The efficacy of cetuximab in a tissue-engineered three-dimensional in vitro model of colorectal cancer

    Directory of Open Access Journals (Sweden)

    Tarig Magdeldin

    2014-07-01

    Full Text Available The preclinical development process of chemotherapeutic drugs is often carried out in two-dimensional monolayer cultures. However, a considerable amount of evidence demonstrates that two-dimensional cell culture does not accurately reflect the three-dimensional in vivo tumour microenvironment, specifically with regard to gene expression profiles, oxygen and nutrient gradients and pharmacokinetics. With this objective in mind, we have developed and established a physiologically relevant three-dimensional in vitro model of colorectal cancer based on the removal of interstitial fluid from collagen type I hydrogels. We employed the RAFT™ (Real Architecture For 3D Tissue system for producing three-dimensional cultures to create a controlled reproducible, multiwell testing platform. Using the HT29 and HCT116 cell lines to model epidermal growth factor receptor expressing colorectal cancers, we characterized three-dimensional cell growth and morphology in addition to the anti-proliferative effects of the anti–epidermal growth factor receptor chemotherapeutic agent cetuximab in comparison to two-dimensional monolayer cultures. Cells proliferated well for 14 days in three-dimensional culture and formed well-defined cellular aggregates within the concentrated collagen matrix. Epidermal growth factor receptor expression levels revealed a twofold and threefold increase in three-dimensional cultures for both HT29 and HCT116 cells in comparison to two-dimensional monolayers, respectively (p < 0.05; p < 0.01. Cetuximab efficacy was significantly lower in HT29 three-dimensional cultures in comparison to two-dimensional monolayers, whereas HCT116 cells in both two-dimension and three-dimension were non-responsive to treatment in agreement with their KRAS mutant status. In summary, these results confirm the use of a three-dimensional in vitro cancer model as a suitable drug-screening platform for in vitro pharmacological testing.

  18. Verifying three-dimensional skull model reconstruction using cranial index of symmetry.

    Science.gov (United States)

    Kung, Woon-Man; Chen, Shuo-Tsung; Lin, Chung-Hsiang; Lu, Yu-Mei; Chen, Tzu-Hsuan; Lin, Muh-Shi

    2013-01-01

    Difficulty exists in scalp adaptation for cranioplasty with customized computer-assisted design/manufacturing (CAD/CAM) implant in situations of excessive wound tension and sub-cranioplasty dead space. To solve this clinical problem, the CAD/CAM technique should include algorithms to reconstruct a depressed contour to cover the skull defect. Satisfactory CAM-derived alloplastic implants are based on highly accurate three-dimensional (3-D) CAD modeling. Thus, it is quite important to establish a symmetrically regular CAD/CAM reconstruction prior to depressing the contour. The purpose of this study is to verify the aesthetic outcomes of CAD models with regular contours using cranial index of symmetry (CIS). From January 2011 to June 2012, decompressive craniectomy (DC) was performed for 15 consecutive patients in our institute. 3-D CAD models of skull defects were reconstructed using commercial software. These models were checked in terms of symmetry by CIS scores. CIS scores of CAD reconstructions were 99.24±0.004% (range 98.47-99.84). CIS scores of these CAD models were statistically significantly greater than 95%, identical to 99.5%, but lower than 99.6% (ppairs signed rank test). These data evidenced the highly accurate symmetry of these CAD models with regular contours. CIS calculation is beneficial to assess aesthetic outcomes of CAD-reconstructed skulls in terms of cranial symmetry. This enables further accurate CAD models and CAM cranial implants with depressed contours, which are essential in patients with difficult scalp adaptation.

  19. Three dimensional fuzzy influence analysis of fitting algorithms on integrated chip topographic modeling

    International Nuclear Information System (INIS)

    Liang, Zhong Wei; Wang, Yi Jun; Ye, Bang Yan; Brauwer, Richard Kars

    2012-01-01

    In inspecting the detailed performance results of surface precision modeling in different external parameter conditions, the integrated chip surfaces should be evaluated and assessed during topographic spatial modeling processes. The application of surface fitting algorithms exerts a considerable influence on topographic mathematical features. The influence mechanisms caused by different surface fitting algorithms on the integrated chip surface facilitate the quantitative analysis of different external parameter conditions. By extracting the coordinate information from the selected physical control points and using a set of precise spatial coordinate measuring apparatus, several typical surface fitting algorithms are used for constructing micro topographic models with the obtained point cloud. In computing for the newly proposed mathematical features on surface models, we construct the fuzzy evaluating data sequence and present a new three dimensional fuzzy quantitative evaluating method. Through this method, the value variation tendencies of topographic features can be clearly quantified. The fuzzy influence discipline among different surface fitting algorithms, topography spatial features, and the external science parameter conditions can be analyzed quantitatively and in detail. In addition, quantitative analysis can provide final conclusions on the inherent influence mechanism and internal mathematical relation in the performance results of different surface fitting algorithms, topographic spatial features, and their scientific parameter conditions in the case of surface micro modeling. The performance inspection of surface precision modeling will be facilitated and optimized as a new research idea for micro-surface reconstruction that will be monitored in a modeling process

  20. Three dimensional fuzzy influence analysis of fitting algorithms on integrated chip topographic modeling

    Energy Technology Data Exchange (ETDEWEB)

    Liang, Zhong Wei; Wang, Yi Jun [Guangzhou Univ., Guangzhou (China); Ye, Bang Yan [South China Univ. of Technology, Guangzhou (China); Brauwer, Richard Kars [Indian Institute of Technology, Kanpur (India)

    2012-10-15

    In inspecting the detailed performance results of surface precision modeling in different external parameter conditions, the integrated chip surfaces should be evaluated and assessed during topographic spatial modeling processes. The application of surface fitting algorithms exerts a considerable influence on topographic mathematical features. The influence mechanisms caused by different surface fitting algorithms on the integrated chip surface facilitate the quantitative analysis of different external parameter conditions. By extracting the coordinate information from the selected physical control points and using a set of precise spatial coordinate measuring apparatus, several typical surface fitting algorithms are used for constructing micro topographic models with the obtained point cloud. In computing for the newly proposed mathematical features on surface models, we construct the fuzzy evaluating data sequence and present a new three dimensional fuzzy quantitative evaluating method. Through this method, the value variation tendencies of topographic features can be clearly quantified. The fuzzy influence discipline among different surface fitting algorithms, topography spatial features, and the external science parameter conditions can be analyzed quantitatively and in detail. In addition, quantitative analysis can provide final conclusions on the inherent influence mechanism and internal mathematical relation in the performance results of different surface fitting algorithms, topographic spatial features, and their scientific parameter conditions in the case of surface micro modeling. The performance inspection of surface precision modeling will be facilitated and optimized as a new research idea for micro-surface reconstruction that will be monitored in a modeling process.

  1. Three-dimensional electromagnetic model of the pulsed-power Z-pinch accelerator

    Directory of Open Access Journals (Sweden)

    D. V. Rose

    2010-01-01

    Full Text Available A three-dimensional, fully electromagnetic model of the principal pulsed-power components of the 26-MA ZR accelerator [D. H. McDaniel et al., in Proceedings of the 5th International Conference on Dense Z-Pinches (AIP, New York, 2002, p. 23] has been developed. This large-scale simulation model tracks the evolution of electromagnetic waves through the accelerator’s intermediate-storage capacitors, laser-triggered gas switches, pulse-forming lines, water switches, triplate transmission lines, and water convolute to the vacuum insulator stack. The insulator-stack electrodes are coupled to a transmission-line circuit model of the four-level magnetically insulated vacuum-transmission-line section and double-post-hole convolute. The vacuum-section circuit model is terminated by a one-dimensional self-consistent dynamic model of an imploding z-pinch load. The simulation results are compared with electrical measurements made throughout the ZR accelerator, and are in good agreement with the data, especially for times until peak load power. This modeling effort demonstrates that 3D electromagnetic models of large-scale, multiple-module, pulsed-power accelerators are now computationally tractable. This, in turn, presents new opportunities for simulating the operation of existing pulsed-power systems used in a variety of high-energy-density-physics and radiographic applications, as well as even higher-power next-generation accelerators before they are constructed.

  2. Three-dimensional Modeling of Tidal Hydrodynamics in the San Francisco Estuary

    Directory of Open Access Journals (Sweden)

    Edward S. Gross

    2010-01-01

    Full Text Available Simulations of circulation in the San Francisco Estuary were performed with the three-dimensional TRIM3D hydrodynamic model using a generic length scale turbulence closure. The model was calibrated to reproduce observed tidal elevations, tidal currents, and salinity observations in the San Francisco Estuary using data collected during 1996-1998, a period of high and variable freshwater flow. It was then validated for 1994-1995, with emphasis on spring of 1994, a period of intensive data collection in the northern estuary. The model predicts tidal elevations and tidal currents accurately, and realistically predicts salinity at both the seasonal and tidal time scales. The model represents salt intrusion into the estuary accurately, and therefore accurately represents the salt balance. The model’s accuracy is adequate for its intended purposes of predicting salinity, analyzing gravitational circulation, and driving a particle-tracking model. Two applications were used to demonstrate the utility of the model. We estimated the components of the longitudinal salt flux and examined their dependence on flow conditions, and compared predicted salt intrusion with estimates from two empirical models.

  3. Three-dimensional geologic model of the Arbuckle-Simpson aquifer, south-central Oklahoma

    Science.gov (United States)

    Faith, Jason R.; Blome, Charles D.; Pantea, Michael P.; Puckette, James O.; Halihan, Todd; Osborn, Noel; Christenson, Scott; Pack, Skip

    2010-01-01

    The Arbuckle-Simpson aquifer of south-central Oklahoma encompasses more than 850 square kilometers and is the principal water resource for south-central Oklahoma. Rock units comprising the aquifer are characterized by limestone, dolomite, and sandstones assigned to two lower Paleozoic units: the Arbuckle and Simpson Groups. Also considered to be part of the aquifer is the underlying Cambrian-age Timbered Hills Group that contains limestone and sandstone. The highly faulted and fractured nature of the Arbuckle-Simpson units and the variable thickness (600 to 2,750 meters) increases the complexity in determining the subsurface geologic framework of this aquifer. A three-dimensional EarthVision (Trademark) geologic framework model was constructed to quantify the geometric relationships of the rock units of the Arbuckle-Simpson aquifer in the Hunton anticline area. This 3-D EarthVision (Trademark) geologic framework model incorporates 54 faults and four modeled units: basement, Arbuckle-Timbered Hills Group, Simpson Group, and post-Simpson. Primary data used to define the model's 54 faults and four modeled surfaces were obtained from geophysical logs, cores, and cuttings from 126 water and petroleum wells. The 3-D framework model both depicts the volumetric extent of the aquifer and provides the stratigraphic layer thickness and elevation data used to construct a MODFLOW version 2000 regional groundwater-flow model.

  4. Three-dimensional finite element models of the human pubic symphysis with viscohyperelastic soft tissues.

    Science.gov (United States)

    Li, Zuoping; Alonso, Jorge E; Kim, Jong-Eun; Davidson, James S; Etheridge, Brandon S; Eberhardt, Alan W

    2006-09-01

    Three-dimensional finite element (FE) models of human pubic symphyses were constructed from computed tomography image data of one male and one female cadaver pelvis. The pubic bones, interpubic fibrocartilaginous disc and four pubic ligaments were segmented semi-automatically and meshed with hexahedral elements using automatic mesh generation schemes. A two-term viscoelastic Prony series, determined by curve fitting results of compressive creep experiments, was used to model the rate-dependent effects of the interpubic disc and the pubic ligaments. Three-parameter Mooney-Rivlin material coefficients were calculated for the discs using a heuristic FE approach based on average experimental joint compression data. Similarly, a transversely isotropic hyperelastic material model was applied to the ligaments to capture average tensile responses. Linear elastic isotropic properties were assigned to bone. The applicability of the resulting models was tested in bending simulations in four directions and in tensile tests of varying load rates. The model-predicted results correlated reasonably with the joint bending stiffnesses and rate-dependent tensile responses measured in experiments, supporting the validity of the estimated material coefficients and overall modeling approach. This study represents an important and necessary step in the eventual development of biofidelic pelvis models to investigate symphysis response under high-energy impact conditions, such as motor vehicle collisions.

  5. A three-dimensional model for thermal analysis in a vanadium flow battery

    International Nuclear Information System (INIS)

    Zheng, Qiong; Zhang, Huamin; Xing, Feng; Ma, Xiangkun; Li, Xianfeng; Ning, Guiling

    2014-01-01

    Highlights: • A three-dimensional model for thermal analysis in a VFB has been developed. • A quasi-static thermal behavior and temperature spatial distribution were showed. • Ohmic heat gets vital in heat generation if applied current density is large enough. • A lower porosity or a faster flow shows a more uniform temperature distribution. • The model shows good prospect in heat and temperature management for a VFB. - Abstract: A three-dimensional model for thermal analysis has been developed to gain a better understanding of thermal behavior in a vanadium flow battery (VFB). The model is based on a comprehensive description of mass, momentum, charge and energy transport and conservation, combining with a global kinetic model for reactions involving all vanadium species. The emphasis in this paper is placed on the heat losses inside a cell. A quasi-static behavior of temperature and the temperature spatial distribution were characterized via the thermal model. The simulations also indicate that the heat generation exhibits a strong dependence on the applied current density. The reaction rate and the over potential rise with an increased applied current density, resulting in the electrochemical reaction heat rises proportionally and the activation heat rises at a parabolic rate. Based on the Ohm’s law, the ohmic heat rises at a parabolic rate when the applied current density increases. As a result, the determining heat source varies when the applied current density changes. While the relative contribution of the three types of heat is dependent on the cell materials and cell geometry, the regularities of heat losses can also be attained via the model. In addition, the electrochemical reaction heat and activation heat have a lack of sensitivity to the porosity and flow rate, whereas an obvious increase of ohmic heat has been observed with the rise of the porosity. A lower porosity or a faster flow shows a better uniformity of temperature distribution in

  6. Three-dimensional hydrodynamical models of wind and outburst-related accretion in symbiotic systems

    Science.gov (United States)

    de Val-Borro, M.; Karovska, M.; Sasselov, D. D.; Stone, J. M.

    2017-07-01

    Gravitationally focused wind accretion in binary systems consisting of an evolved star with a gaseous envelope and a compact accreting companion is a possible mechanism to explain mass transfer in symbiotic binaries. We study the mass accretion around the secondary caused by the strong wind from the primary late-type component using global three-dimensional hydrodynamic numerical simulations during quiescence and outburst stages. In particular, the dependence of the mass accretion rate on the mass-loss rate, wind parameters and phases of wind outburst development is considered. For a typical wind from an asymptotic giant branch star with a mass-loss rate of 10-6 M⊙ yr-1 and wind speeds of 20-50 km s-1, the mass transfer through a focused wind results in efficient infall on to the secondary. Accretion rates on to the secondary of 5-20 per cent of the mass-loss from the primary are obtained during quiescence and outburst periods where the wind velocity and mass-loss rates are varied, about 20-50 per cent larger than in the standard Bondi-Hoyle-Lyttleton approximation. This mechanism could be an important method for explaining observed accretion luminosities and periodic modulations in the accretion rates for a broad range of interacting binary systems.

  7. A three-dimensional numerical study on dynamics behavior of a rising vapor bubble in uniformly superheated liquid by lattice Boltzmann method

    International Nuclear Information System (INIS)

    Sun, Tao; Sun, Jiangang; Ang, Xueye; Li, Shanshan; Su, Xin

    2016-01-01

    Highlights: • Dynamics of vapor bubble in uniformly superheated liquid is studied by a 3D LBM. • The growth rate reaches a maximum value and then decrease until a certain value. • The vapor bubble will take place a larger deformation at high ratio of Re/Eo. • The bubble wake has a great influence on motion and deformation of vapor bubble. • Ratio of Re/Eo has an important influence on evolution of temperature field. - Abstract: In this paper, dynamics behaviors of a rising vapor bubble in uniformly superheated liquid are firstly studied by a hybrid three-dimensional lattice Boltzmann model. In order to validate this model, two test cases regarding bubble rising in an isothermal system and vapor bubble growth in a superheated liquid are performed, respectively. The test results are consistent with existing results and indicate the feasibility of the hybrid model. The hybrid model is further applied to simulate growth and deformation of a rising vapor bubble in different physical conditions. Some physical parameters of vapor bubble such as equivalent diameter and growth rate are evaluated accurately by three-dimensional simulations. It is found that the growth rate of vapor bubble changes with time and temperature gradient. It reaches a maximum value at the initial stage and then decrease until a certain value. The growth and deformation of vapor bubble at different ratios of Re/Eo are discussed. The numerical results show the vapor bubble will take place a larger deformation at high ratio of Re/Eo at the middle and final stages. In addition, the hybrid model is also applied to predict the evolution of flow and temperature fields. The bubble wake has a great influence on the motion and deformation of vapor bubble during rising process. As far as the temperature field is concerned, a ratio of Re/Eo has an important influence on heat transfer and evolution of temperature field.

  8. Three dimensional modeling of depositional geometries. A case study from Tofane Group (Dolomites, Italy).

    Science.gov (United States)

    Gattolin, G.; Franceschi, M.; Breda, A.; Teza, G.; Preto, N.

    2012-04-01

    At the end of the Early Carnian, the Carnian Pluvial Event (CPE) resulted in a major crisis of carbonate factories. The sharp change in carbonate production lead to a dramatic modifications in depositional geometries. Steep clinoforms of the high-relief pre-crisis carbonate platforms were replaced by low-angle ramps. Spatial characters of depositional geometries can be decisive in identifying the genesis of geological bodies. We here show how 3D modeling techniques can be applied to help in quantifying and highlighting their variations. As case study we considered two outcrops in the Tofane Group (Dolomites, Italy). The first outcrop (bottom of southern walls of Tofana di Rozes) exposes a platform-to-basin transect of pre- and post-crisis platforms, the second (Dibona hut) a clinostratified carbonate body deposited during the Carnian crisis. Outcrop conditions at both sites, with vertical and hardly accessible walls, make the field tracing of depositional geometries particularly challenging. Line drawing on high resolution pictures can help (e.g. for clinoforms), but its use for quantification is hampered by perspective deformation. Three dimensional acquisition and modeling allow to retrieve the true spatial characters of sedimentary bodies in these outcrops. The geometry of the carbonate body at Dibona (~ 15000 sqm) was acquired with terrestrial LiDAR, while for Tofana photogrammetric techniques were applied because of the extension of the outcrop itself (~ 240000 sqm) and the lack of suitable points of view for terrestrial laser scanning. At Tofana, field observations reveal the presence of tens-hundreds m large carbonate mounds grown on a pre-existing inclined surface, intercalated with skeletal carbonates and siltites-arenites. This system rapidly evolves into a carbonate-clastic ramp. Photogrammetric topography acquisition permitted to place and visualize geological features in a three dimensional frame, thus obtaining a conceptual sedimentological model. A 3

  9. Three-dimensional printing of Hela cells for cervical tumor model in vitro

    International Nuclear Information System (INIS)

    Zhao, Yu; Yao, Rui; Ouyang, Liliang; Ding, Hongxu; Zhang, Ting; Sun, Wei; Zhang, Kaitai; Cheng, Shujun

    2014-01-01

    Advances in three-dimensional (3D) printing have enabled the direct assembly of cells and extracellular matrix materials to form in vitro cellular models for 3D biology, the study of disease pathogenesis and new drug discovery. In this study, we report a method of 3D printing for Hela cells and gelatin/alginate/fibrinogen hydrogels to construct in vitro cervical tumor models. Cell proliferation, matrix metalloproteinase (MMP) protein expression and chemoresistance were measured in the printed 3D cervical tumor models and compared with conventional 2D planar culture models. Over 90% cell viability was observed using the defined printing process. Comparisons of 3D and 2D results revealed that Hela cells showed a higher proliferation rate in the printed 3D environment and tended to form cellular spheroids, but formed monolayer cell sheets in 2D culture. Hela cells in 3D printed models also showed higher MMP protein expression and higher chemoresistance than those in 2D culture. These new biological characteristics from the printed 3D tumor models in vitro as well as the novel 3D cell printing technology may help the evolution of 3D cancer study. (paper)

  10. Characterization and three-dimensional reconstruction of synthetic bone model foams

    Energy Technology Data Exchange (ETDEWEB)

    Gómez, S. [Interdepartment Research Group for the Applied Scientific Collaboration (IRGASC), Division of Biomaterials and Bioengineering, Technical University of Catalonia (UPC), Avda. Diagonal 647, E-08028 Barcelona (Spain); Vlad, M.D. [Interdepartment Research Group for the Applied Scientific Collaboration (IRGASC), Division of Biomaterials and Bioengineering, Technical University of Catalonia (UPC), Avda. Diagonal 647, E-08028 Barcelona (Spain); Faculty of Medical Bioengineering, “Gr. T. Popa” University of Medicine and Pharmacy, Str. Kogalniceanu 9-13, 700454 Iasi (Romania); López, J. [Interdepartment Research Group for the Applied Scientific Collaboration (IRGASC), Division of Biomaterials and Bioengineering, Technical University of Catalonia (UPC), Avda. Diagonal 647, E-08028 Barcelona (Spain); Navarro, M. [Centre de Biotecnologia Animal i de Teràpia Gènica (CBATEG), Departament de Sanitat i d' Anatomia Animals, Universitat Autònoma de Barcelona, E-08193 Bellaterra, Cerdanyola del Vallès (Spain); Fernández, E., E-mail: enrique.fernandez@upc.edu [Interdepartment Research Group for the Applied Scientific Collaboration (IRGASC), Division of Biomaterials and Bioengineering, Technical University of Catalonia (UPC), Avda. Diagonal 647, E-08028 Barcelona (Spain)

    2013-08-01

    Sawbones© open-cell foams with different porosity grades are being used as synthetic bone-like models for in vitro mechanical and infiltration experiments. However, a comprehensive characterization of these foams is not available and there is a lack of reliable information about them. For this reason two of these foams (Refs. 1522-505 and -507) have been characterized at the micro architectural level by scanning electron microscopy, computed tomography and image data analysis. BoneJ open software and ImageJ open software were used to obtain the characteristic histomorphometric parameters and the three dimensional virtual models of the foams. The results showed that both foams, while having different macro porosities, appeared undistinguishable at the micro scale. Moreover, the micro structural features resembled those of osteoporotic rather than healthy trabecular bone. It is concluded that Sawbones© foams behave reasonably as synthetic bone-like models. Consequently, their use is recommended for in vitro comparison purposes of both mechanical and infiltration testing performed in real vertebra. Finally, the virtual models obtained, which are available under request, can favour comparisons between future self-similar in vitro experiments and computer simulations. - Highlights: • Sawbones© model foams have been scanned by μ-CT. • Histomorphometric indices and 3D virtual models have been obtained. • The results will be of use to understand biocement vertebra infiltration studies.

  11. Electrothermal Equivalent Three-Dimensional Finite-Element Model of a Single Neuron.

    Science.gov (United States)

    Cinelli, Ilaria; Destrade, Michel; Duffy, Maeve; McHugh, Peter

    2018-06-01

    We propose a novel approach for modelling the interdependence of electrical and mechanical phenomena in nervous cells, by using electrothermal equivalences in finite element (FE) analysis so that existing thermomechanical tools can be applied. First, the equivalence between electrical and thermal properties of the nerve materials is established, and results of a pure heat conduction analysis performed in Abaqus CAE Software 6.13-3 are validated with analytical solutions for a range of steady and transient conditions. This validation includes the definition of equivalent active membrane properties that enable prediction of the action potential. Then, as a step toward fully coupled models, electromechanical coupling is implemented through the definition of equivalent piezoelectric properties of the nerve membrane using the thermal expansion coefficient, enabling prediction of the mechanical response of the nerve to the action potential. Results of the coupled electromechanical model are validated with previously published experimental results of deformation for squid giant axon, crab nerve fibre, and garfish olfactory nerve fibre. A simplified coupled electromechanical modelling approach is established through an electrothermal equivalent FE model of a nervous cell for biomedical applications. One of the key findings is the mechanical characterization of the neural activity in a coupled electromechanical domain, which provides insights into the electromechanical behaviour of nervous cells, such as thinning of the membrane. This is a first step toward modelling three-dimensional electromechanical alteration induced by trauma at nerve bundle, tissue, and organ levels.

  12. Characterization and three-dimensional reconstruction of synthetic bone model foams

    International Nuclear Information System (INIS)

    Gómez, S.; Vlad, M.D.; López, J.; Navarro, M.; Fernández, E.

    2013-01-01

    Sawbones© open-cell foams with different porosity grades are being used as synthetic bone-like models for in vitro mechanical and infiltration experiments. However, a comprehensive characterization of these foams is not available and there is a lack of reliable information about them. For this reason two of these foams (Refs. 1522-505 and -507) have been characterized at the micro architectural level by scanning electron microscopy, computed tomography and image data analysis. BoneJ open software and ImageJ open software were used to obtain the characteristic histomorphometric parameters and the three dimensional virtual models of the foams. The results showed that both foams, while having different macro porosities, appeared undistinguishable at the micro scale. Moreover, the micro structural features resembled those of osteoporotic rather than healthy trabecular bone. It is concluded that Sawbones© foams behave reasonably as synthetic bone-like models. Consequently, their use is recommended for in vitro comparison purposes of both mechanical and infiltration testing performed in real vertebra. Finally, the virtual models obtained, which are available under request, can favour comparisons between future self-similar in vitro experiments and computer simulations. - Highlights: • Sawbones© model foams have been scanned by μ-CT. • Histomorphometric indices and 3D virtual models have been obtained. • The results will be of use to understand biocement vertebra infiltration studies

  13. Three-dimensional modeling of radiative and convective exchanges in the urban atmosphere

    International Nuclear Information System (INIS)

    Qu, Yongfeng

    2011-01-01

    In many micro-meteorological studies, building resolving models usually assume a neutral atmosphere. Nevertheless, urban radiative transfers play an important role because of their influence on the energy budget. In order to take into account atmospheric radiation and the thermal effects of the buildings in simulations of atmospheric flow and pollutant dispersion in urban areas, we have developed a three-dimensional (3D) atmospheric radiative scheme, in the atmospheric module of the Computational Fluid Dynamics model Code-Saturne. The radiative scheme was previously validated with idealized cases, using as a first step, a constant 3D wind field. In this work, the full coupling of the radiative and thermal schemes with the dynamical model is evaluated. The aim of the first part is to validate the full coupling with the measurements of the simple geometry from the 'Mock Urban Setting Test' (MUST) experiment. The second part discusses two different approaches to model the radiative exchanges in urban area with a comparison between Code-Saturne and SOLENE. The third part applies the full coupling scheme to show the contribution of the radiative transfer model on the airflow pattern in low wind speed conditions in a 3D urban canopy. In the last part we use the radiative-dynamics coupling to simulate a real urban environment and validate the modeling approach with field measurements from the 'Canopy and Aerosol Particles Interactions in Toulouse Urban Layer' (CAPITOUL). (author) [fr

  14. Anatomical Reproducibility of a Head Model Molded by a Three-dimensional Printer.

    Science.gov (United States)

    Kondo, Kosuke; Nemoto, Masaaki; Masuda, Hiroyuki; Okonogi, Shinichi; Nomoto, Jun; Harada, Naoyuki; Sugo, Nobuo; Miyazaki, Chikao

    2015-01-01

    We prepared rapid prototyping models of heads with unruptured cerebral aneurysm based on image data of computed tomography angiography (CTA) using a three-dimensional (3D) printer. The objective of this study was to evaluate the anatomical reproducibility and accuracy of these models by comparison with the CTA images on a monitor. The subjects were 22 patients with unruptured cerebral aneurysm who underwent preoperative CTA. Reproducibility of the microsurgical anatomy of skull bone and arteries, the length and thickness of the main arteries, and the size of cerebral aneurysm were compared between the CTA image and rapid prototyping model. The microsurgical anatomy and arteries were favorably reproduced, apart from a few minute regions, in the rapid prototyping models. No significant difference was noted in the measured lengths of the main arteries between the CTA image and rapid prototyping model, but errors were noted in their thickness (p printer. It was concluded that these models are useful tools for neurosurgical simulation. The thickness of the main arteries and size of cerebral aneurysm should be comprehensively judged including other neuroimaging in consideration of errors.

  15. Three-Dimensional Geological Model of Quaternary Sediments in Walworth County, Wisconsin, USA

    Directory of Open Access Journals (Sweden)

    Jodi Lau

    2016-07-01

    Full Text Available A three-dimensional (3D geologic model was developed for Quaternary deposits in southern Walworth County, WI using Petrel, a software package primarily designed for use in the energy industry. The purpose of this research was to better delineate and characterize the shallow glacial deposits, which include multiple shallow sand and gravel aquifers. The 3D model of Walworth County was constructed using datasets such as the U.S. Geological Survey 30 m digital elevation model (DEM of land surface, published maps of the regional surficial geology and bedrock topography, and a database of water-well records. Using 3D visualization and interpretation tools, more than 1400 lithostratigraphic picks were efficiently interpreted amongst 725 well records. The final 3D geologic model consisted of six Quaternary lithostratigraphic units and a bedrock horizon as the model base. The Quaternary units include in stratigraphic order from youngest to oldest: the New Berlin Member of the Holy Hill Formation, the Tiskilwa Member of the Zenda Formation, a Sub-Tiskilwa Sand/Gravel unit, the Walworth Formation, a Sub-Walworth Sand/Gravel unit, and a Pre-Illinoisan unit. Compared to previous studies, the results of this study indicate a more detailed distribution, thickness, and interconnectivity between shallow sand and gravel aquifers and their connectivity to shallow bedrock aquifers. This study can also help understand uncertainty within previous local groundwater-flow modeling studies and improve future studies.

  16. FREESURF: A three-dimensional finite-element model for simulating groundwater flow into and around an excavation

    Energy Technology Data Exchange (ETDEWEB)

    Weitzman, Morley

    1992-07-15

    A three-dimensional finite-element code was developed and used to simulate the flow of groundwater towards an excavation in a saturated porous medium, allowing for seepage faces. An iterative procedure was used to predict the movement of the water table and the seepage flux. The numerical solution agreed well with experimental results from a sandbox experiment. (auth)

  17. Three Dimensional Response Spectrum Soil Structure Modeling Versus Conceptual Understanding To Illustrate Seismic Response Of Structures

    International Nuclear Information System (INIS)

    Touqan, Abdul Razzaq

    2008-01-01

    Present methods of analysis and mathematical modeling contain so many assumptions that separate them from reality and thus represent a defect in design which makes it difficult to analyze reasons of failure. Three dimensional (3D) modeling is so superior to 1D or 2D modeling, static analysis deviates from the true nature of earthquake load which is ''a dynamic punch'', and conflicting assumptions exist between structural engineers (who assume flexible structures on rigid block foundations) and geotechnical engineers (who assume flexible foundations supporting rigid structures). Thus a 3D dynamic soil-structure interaction is a step that removes many of the assumptions and thus clears reality to a greater extent. However such a model cannot be analytically analyzed. We need to anatomize and analogize it. The paper will represent a conceptual (analogical) 1D model for soil structure interaction and clarifies it by comparing its outcome with 3D dynamic soil-structure finite element analysis of two structures. The aim is to focus on how to calculate the period of the structure and to investigate effect of variation of stiffness on soil-structure interaction

  18. Ultrasonic characterization of three animal mammary tumors from three-dimensional acoustic tissue models

    Science.gov (United States)

    Mamou, Jonathan M.

    This dissertation investigated how three-dimensional (3D) tissue models can be used to improve ultrasonic tissue characterization (UTC) techniques. Anatomic sites in tissue responsible for ultrasonic scattering are unknown, which limits the potential applications of ultrasound for tumor diagnosis. Accurate 3D models of tumor tissues may help identify the scattering sites. Three mammary tumors were investigated: a rat fibroadenoma, a mouse carcinoma, and a mouse sarcoma. A 3D acoustic tissue model, termed 3D impedance map (3DZM), was carefully constructed from consecutive histologic sections for each tumor. Spectral estimates (scatterer size and acoustic concentration) were obtained from the 3DZMs and compared to the same estimates obtained with ultrasound. Scatterer size estimates for three tumors were found to be similar (within 10%). The 3DZMs were also used to extract tissue-specific scattering models. The scattering models were found to allow clear distinction between the three tumors. This distinction demonstrated that UTC techniques may be helpful for noninvasive clinical tumor diagnosis.

  19. Simplest simulation model for three-dimensional xenon oscillations in large PWRs

    International Nuclear Information System (INIS)

    Shimazu, Yoichiro

    2004-01-01

    Xenon oscillations in large PWRs are well understood and there have been no operational problems remained. However, in order to suppress the oscillations effectively, optimal control strategy is preferable. Generally speaking in such optimality search based on the modern control theory, a large volume of transient core analyses is required. For example, three dimensional core calculations are inevitable for the analyses of radial oscillations. From this point of view, a very simple 3-D model is proposed, which is based on a reactor model of only four points. As in the actual reactor operation, the magnitude of xenon oscillations should be limited from the view point of safety, the model further assumes that the neutron leakage can be also small or even constant. It can explicitly use reactor parameters such as reactivity coefficients and control rod worth directly. The model is so simplified as described above that it can predict oscillation behavior in a very short calculation time even on a PC. However the prediction result is good. The validity of the model in comparison with measured data and the applications are discussed. (author)

  20. Three-dimensional shear transformation zone dynamics model for amorphous metals

    International Nuclear Information System (INIS)

    Homer, Eric R; Schuh, Christopher A

    2010-01-01

    A fully three-dimensional (3D) mesoscale modeling framework for the mechanical behavior of amorphous metals is proposed. The model considers the coarse-grained action of shear transformation zones (STZs) as the fundamental deformation event. The simulations are controlled through the kinetic Monte Carlo algorithm and the mechanical response of the system is captured through finite-element analysis, where STZs are mapped onto a 3D finite-element mesh and are allowed to shear in any direction in three dimensions. Implementation of the technique in uniaxial creep tests over a wide range of conditions validates the model's ability to capture the expected behaviors of an amorphous metal, including high temperature flow conforming to the expected constitutive law and low temperature localization in the form of a nascent shear band. The simulation results are combined to construct a deformation map that is comparable to experimental deformation maps. The flexibility of the modeling framework is illustrated by performing a contact test (simulated nanoindentation) in which the model deforms through STZ activity in the region experiencing the highest shear stress

  1. Development of the three dimensional flow model in the SPACE code

    International Nuclear Information System (INIS)

    Oh, Myung Taek; Park, Chan Eok; Kim, Shin Whan

    2014-01-01

    SPACE (Safety and Performance Analysis CodE) is a nuclear plant safety analysis code, which has been developed in the Republic of Korea through a joint research between the Korean nuclear industry and research institutes. The SPACE code has been developed with multi-dimensional capabilities as a requirement of the next generation safety code. It allows users to more accurately model the multi-dimensional flow behavior that can be exhibited in components such as the core, lower plenum, upper plenum and downcomer region. Based on generalized models, the code can model any configuration or type of fluid system. All the geometric quantities of mesh are described in terms of cell volume, centroid, face area, and face center, so that it can naturally represent not only the one dimensional (1D) or three dimensional (3D) Cartesian system, but also the cylindrical mesh system. It is possible to simulate large and complex domains by modelling the complex parts with a 3D approach and the rest of the system with a 1D approach. By 1D/3D co-simulation, more realistic conditions and component models can be obtained, providing a deeper understanding of complex systems, and it is expected to overcome the shortcomings of 1D system codes. (author)

  2. A California statewide three-dimensional seismic velocity model from both absolute and differential times

    Science.gov (United States)

    Lin, G.; Thurber, C.H.; Zhang, H.; Hauksson, E.; Shearer, P.M.; Waldhauser, F.; Brocher, T.M.; Hardebeck, J.

    2010-01-01

    We obtain a seismic velocity model of the California crust and uppermost mantle using a regional-scale double-difference tomography algorithm. We begin by using absolute arrival-time picks to solve for a coarse three-dimensional (3D) P velocity (VP) model with a uniform 30 km horizontal node spacing, which we then use as the starting model for a finer-scale inversion using double-difference tomography applied to absolute and differential pick times. For computational reasons, we split the state into 5 subregions with a grid spacing of 10 to 20 km and assemble our final statewide VP model by stitching together these local models. We also solve for a statewide S-wave model using S picks from both the Southern California Seismic Network and USArray, assuming a starting model based on the VP results and a VP=VS ratio of 1.732. Our new model has improved areal coverage compared with previous models, extending 570 km in the SW-NE directionand 1320 km in the NW-SE direction. It also extends to greater depth due to the inclusion of substantial data at large epicentral distances. Our VP model generally agrees with previous separate regional models for northern and southern California, but we also observe some new features, such as high-velocity anomalies at shallow depths in the Klamath Mountains and Mount Shasta area, somewhat slow velocities in the northern Coast Ranges, and slow anomalies beneath the Sierra Nevada at midcrustal and greater depths. This model can be applied to a variety of regional-scale studies in California, such as developing a unified statewide earthquake location catalog and performing regional waveform modeling.

  3. Orientation selection of equiaxed dendritic growth by three-dimensional cellular automaton model

    Energy Technology Data Exchange (ETDEWEB)

    Wei Lei [State Key Laboratory of Solidification Processing, Northwestern Polytechnical University, Xi' an 710072 (China); Lin Xin, E-mail: xlin@nwpu.edu.cn [State Key Laboratory of Solidification Processing, Northwestern Polytechnical University, Xi' an 710072 (China); Wang Meng; Huang Weidong [State Key Laboratory of Solidification Processing, Northwestern Polytechnical University, Xi' an 710072 (China)

    2012-07-01

    A three-dimensional (3-D) adaptive mesh refinement (AMR) cellular automata (CA) model is developed to simulate the equiaxed dendritic growth of pure substance. In order to reduce the mesh induced anisotropy by CA capture rules, a limited neighbor solid fraction (LNSF) method is presented. It is shown that the LNSF method reduced the mesh induced anisotropy based on the simulated morphologies for isotropic interface free energy. An expansion description using two interface free energy anisotropy parameters ({epsilon}{sub 1}, {epsilon}{sub 2}) is used in the present 3-D CA model. It is illustrated by present 3-D CA model that the positive {epsilon}{sub 1} favors the dendritic growth with the Left-Pointing-Angle-Bracket 100 Right-Pointing-Angle-Bracket preferred directions, and negative {epsilon}{sub 2} favors dendritic growth with the Left-Pointing-Angle-Bracket 110 Right-Pointing-Angle-Bracket preferred directions, which has a good agreement with the prediction of the spherical plot of the inverse of the interfacial stiffness. The dendritic growths with the orientation selection between Left-Pointing-Angle-Bracket 100 Right-Pointing-Angle-Bracket and Left-Pointing-Angle-Bracket 110 Right-Pointing-Angle-Bracket are also discussed using the different {epsilon}{sub 1} with {epsilon}{sub 2}=-0.02. It is found that the simulated morphologies by present CA model are as expected from the minimum stiffness criterion.

  4. Geostatistical three-dimensional modeling of oolite shoals, St. Louis Limestone, southwest Kansas

    Science.gov (United States)

    Qi, L.; Carr, T.R.; Goldstein, R.H.

    2007-01-01

    In the Hugoton embayment of southwestern Kansas, reservoirs composed of relatively thin (Big Bow and Sand Arroyo Creek fields. Lithofacies in uncored wells were predicted from digital logs using a neural network. The tilting effect from the Laramide orogeny was removed to construct restored structural surfaces at the time of deposition. Well data and structural maps were integrated to build 3-D models of oolitic reservoirs using stochastic simulations with geometry data. Three-dimensional models provide insights into the distribution, the external and internal geometry of oolitic deposits, and the sedimentologic processes that generated reservoir intervals. The structural highs and general structural trend had a significant impact on the distribution and orientation of the oolitic complexes. The depositional pattern and connectivity analysis suggest an overall aggradation of shallow-marine deposits during pulses of relative sea level rise followed by deepening near the top of the St. Louis Limestone. Cemented oolitic deposits were modeled as barriers and baffles and tend to concentrate at the edge of oolitic complexes. Spatial distribution of porous oolitic deposits controls the internal geometry of rock properties. Integrated geostatistical modeling methods can be applicable to other complex carbonate or siliciclastic reservoirs in shallow-marine settings. Copyright ?? 2007. The American Association of Petroleum Geologists. All rights reserved.

  5. A three-dimensional model of solar radiation transfer in a non-uniform plant canopy

    Science.gov (United States)

    Levashova, N. T.; Mukhartova, Yu V.

    2018-01-01

    A three-dimensional (3D) model of solar radiation transfer in a non-uniform plant canopy was developed. It is based on radiative transfer equations and a so-called turbid medium assumption. The model takes into account the multiple scattering contributions of plant elements in radiation fluxes. These enable more accurate descriptions of plant canopy reflectance and transmission in different spectral bands. The model was applied to assess the effects of plant canopy heterogeneity on solar radiation transmission and to quantify the difference in a radiation transfer between photosynthetically active radiation PAR (=0.39-0.72 μm) and near infrared solar radiation NIR (Δλ = 0.72-3.00 μm). Comparisons of the radiative transfer fluxes simulated by the 3D model within a plant canopy consisted of sparsely planted fruit trees (plant area index, PAI - 0.96 m2 m-2) with radiation fluxes simulated by a one-dimensional (1D) approach, assumed horizontal homogeneity of plant and leaf area distributions, showed that, for sunny weather conditions with a high solar elevation angle, an application of a simplified 1D approach can result in an underestimation of transmitted solar radiation by about 22% for PAR, and by about 26% for NIR.

  6. Theory for the three-dimensional Mercedes-Benz model of water

    Science.gov (United States)

    Bizjak, Alan; Urbic, Tomaz; Vlachy, Vojko; Dill, Ken A.

    2009-11-01

    The two-dimensional Mercedes-Benz (MB) model of water has been widely studied, both by Monte Carlo simulations and by integral equation methods. Here, we study the three-dimensional (3D) MB model. We treat water as spheres that interact through Lennard-Jones potentials and through a tetrahedral Gaussian hydrogen bonding function. As the "right answer," we perform isothermal-isobaric Monte Carlo simulations on the 3D MB model for different pressures and temperatures. The purpose of this work is to develop and test Wertheim's Ornstein-Zernike integral equation and thermodynamic perturbation theories. The two analytical approaches are orders of magnitude more efficient than the Monte Carlo simulations. The ultimate goal is to find statistical mechanical theories that can efficiently predict the properties of orientationally complex molecules, such as water. Also, here, the 3D MB model simply serves as a useful workbench for testing such analytical approaches. For hot water, the analytical theories give accurate agreement with the computer simulations. For cold water, the agreement is not as good. Nevertheless, these approaches are qualitatively consistent with energies, volumes, heat capacities, compressibilities, and thermal expansion coefficients versus temperature and pressure. Such analytical approaches offer a promising route to a better understanding of water and also the aqueous solvation.

  7. Theory for the three-dimensional Mercedes-Benz model of water.

    Science.gov (United States)

    Bizjak, Alan; Urbic, Tomaz; Vlachy, Vojko; Dill, Ken A

    2009-11-21

    The two-dimensional Mercedes-Benz (MB) model of water has been widely studied, both by Monte Carlo simulations and by integral equation methods. Here, we study the three-dimensional (3D) MB model. We treat water as spheres that interact through Lennard-Jones potentials and through a tetrahedral Gaussian hydrogen bonding function. As the "right answer," we perform isothermal-isobaric Monte Carlo simulations on the 3D MB model for different pressures and temperatures. The purpose of this work is to develop and test Wertheim's Ornstein-Zernike integral equation and thermodynamic perturbation theories. The two analytical approaches are orders of magnitude more efficient than the Monte Carlo simulations. The ultimate goal is to find statistical mechanical theories that can efficiently predict the properties of orientationally complex molecules, such as water. Also, here, the 3D MB model simply serves as a useful workbench for testing such analytical approaches. For hot water, the analytical theories give accurate agreement with the computer simulations. For cold water, the agreement is not as good. Nevertheless, these approaches are qualitatively consistent with energies, volumes, heat capacities, compressibilities, and thermal expansion coefficients versus temperature and pressure. Such analytical approaches offer a promising route to a better understanding of water and also the aqueous solvation.

  8. Engineering of microscale three-dimensional pancreatic islet models in vitro and their biomedical applications.

    Science.gov (United States)

    Gao, Bin; Wang, Lin; Han, Shuang; Pingguan-Murphy, Belinda; Zhang, Xiaohui; Xu, Feng

    2016-08-01

    Diabetes now is the most common chronic disease in the world inducing heavy burden for the people's health. Based on this, diabetes research such as islet function has become a hot topic in medical institutes of the world. Today, in medical institutes, the conventional experiment platform in vitro is monolayer cell culture. However, with the development of micro- and nano-technologies, several microengineering methods have been developed to fabricate three-dimensional (3D) islet models in vitro which can better mimic the islet of pancreases in vivo. These in vitro islet models have shown better cell function than monolayer cells, indicating their great potential as better experimental platforms to elucidate islet behaviors under both physiological and pathological conditions, such as the molecular mechanisms of diabetes and clinical islet transplantation. In this review, we present the state-of-the-art advances in the microengineering methods for fabricating microscale islet models in vitro. We hope this will help researchers to better understand the progress in the engineering 3D islet models and their biomedical applications such as drug screening and islet transplantation.

  9. Three-dimensional model of a selective theophylline-binding RNA molecule

    Energy Technology Data Exchange (ETDEWEB)

    Tung, Chang-Shung; Oprea, T.I.; Hummer, G.; Garcia, A.E.

    1995-07-01

    We propose a three-dimensional (3D) model for an RNA molecule that selectively binds theophylline but not caffeine. This RNA, which was found using SELEX [Jenison, R.D., et al., Science (1994) 263:1425] is 10,000 times more specific for theophylline (Kd=320 nM) than for caffeine (Kd=3.5 mM), although the two ligands are identical except for a methyl group substituted at N7 (present only in caffeine). The binding affinity for ten xanthine-based ligands was used to derive a Comparative Molecular Field Analysis (CoMFA) model (R{sup 2} = 0.93 for 3 components, with cross-validated R{sup 2} of 0.73), using the SYBYL and GOLPE programs. A pharmacophoric map was generated to locate steric and electrostatic interactions between theophylline and the RNA binding site. This information was used to identify putative functional groups of the binding pocket and to generate distance constraints. Based on a model for the secondary structure (Jenison et al., idem), the 3D structure of this RNA was then generated using the following method: each helical region of the RNA molecule was treated as a rigid body; single-stranded loops with specific end-to-end distances were generated. The structures of RNA-xanthine complexes were studied using a modified Monte Carlo algorithm. The detailed structure of an RNA-ligand complex model, as well as possible explanations for the theophylline selectivity will be discussed.

  10. A three-dimensional laboratory steam injection model allowing in situ saturation measurements

    Energy Technology Data Exchange (ETDEWEB)

    Demiral, B.M.R.; Pettit, P.A.; Castanier, L.M.; Brigham, W.E.

    1992-08-01

    The CT imaging technique together with temperature and pressure measurements were used to follow the steam propagation during steam and steam foam injection experiments in a three dimensional laboratory steam injection model. The advantages and disadvantages of different geometries were examined to find out which could best represent radial and gravity override flows and also fit the dimensions of the scanning field of the CT scanner. During experiments, steam was injected continuously at a constant rate into the water saturated model and CT scans were taken at six different cross sections of the model. Pressure and temperature data were collected with time at three different levels in the model. During steam injection experiments, the saturations obtained by CT matched well with the temperature data. That is, the steam override as observed by temperature data was also clearly seen on the CT pictures. During the runs where foam was present, the saturation distributions obtained from CT pictures showed a piston like displacement. However, the temperature distributions were different depending on the type of steam foam process used. The results clearly show that the pressure/temperature data alone are not sufficient to study steam foam in the presence of non-condensible gas.

  11. Three-dimensional MR microscopy of a transgenic mouse model of dilated cardiomyopathy

    Energy Technology Data Exchange (ETDEWEB)

    Sze, R.W.; Strife, J.L. [Dept. of Radiology, Children' s Hospital Medical Center, Cincinnati, OH (United States); Chan, C.B.; Sanbe, A.; Robbins, J. [Div. of Molecular Cardiovascular Biology, Department of Pediatrics, Children' s Hospital Research Foundation, Cincinnati, OH (United States); Dardzinski, B.J.; Dunn, S.; Schmithorst, V.; Holland, S.K. [Imaging Research Center, Children' s Hospital Medical Center, Cincinnati, OH (United States)

    2001-02-01

    Background. Scientists are now able to alter the genetics of vertebrate embryos routinely to produce animal models of human developmental diseases. However, our understanding of structural changes in these animal models is limited by current methodologies. Histological techniques, although providing great anatomic detail, display only ''static'' data (one time point only) in two dimensions. Ultrasound may be used to generate continuous time course data, but is limited by interobserver variation, limited acoustic windows, and relatively low resolution. Objective. To apply the high resolution, non-destructive, and three-dimensional acquisition capabilities of magnetic resonance (MR) microscopy to compare the hearts of normal mice versus an established transgenic mouse model of dilated cardiomyopathy. Materials and methods. Transgenic mice exhibiting dilated cardiomyopathy were developed via the introduction of a mutated, heart-specific gene (myosin light chain). Post-mortem cardiac imaging was performed on the transgenic mice and normal controls. MR imaging was performed on a Bruker 3T imaging magnet using a custom radiofrequency coil following contrast perfusion of the atrial and ventricular chambers. Image resolution was 156 {mu}m isotropic voxels. MR images were compared to gross pathologic specimens. Imaging data were post-processed using custom software to calculate the volumes of the atria and ventricles and to display the three-dimensional morphology of the chambers and myocardium. Results. Of the seven mice scanned, four exhibited normal right atrial (average = 14.8 {mu}l {+-} 1.4), left atrial (average = 8.5 {mu}l {+-} 0.3), right ventricular (average = 12.9 {mu}l {+-} 2.7), and left ventricular (average 3.3 {mu}l {+-} 0.5) volumes. Three mice exhibited dilatation of the right and left cardiac chambers (RA average = 23.9 {mu}l {+-} 5.6; LA average = 15.9 {mu}l {+-} 4.8; RV average = 32.5 {mu}l {+-} 6.8; LV average 24.0 {mu}l {+-} 1

  12. Three dimensional mathematical modeling of violin plate surfaces: An approach based on an ensemble of contour lines.

    Science.gov (United States)

    Piantadosi, Steven

    2017-01-01

    This paper presents an approach to describing the three dimensional shape of a violin plate in mathematical form. The shape description begins with standard contour lines and ends with an equation for a surface in three dimensional space. The traditional specification of cross sectional arching is unnecessary. Advantages of this approach are that it employs simple and universal description of plate geometry and yields a complete, smoothed, precise mathematical equation of the plate that is suitable for modern three dimensional production. It is quite general and suitable for both exterior and interior plate surfaces, yielding the ability to control thicknesses along with shape. This method can produce mathematical descriptions with tolerances easily less than 0.001 millimeters suitable for modern computerized numerical control carving and hand finishing.

  13. Virtual Geographic Simulation of Light Distribution within Three-Dimensional Plant Canopy Models

    Directory of Open Access Journals (Sweden)

    Liyu Tang

    2017-12-01

    Full Text Available Virtual geographic environments (VGEs have been regarded as an important new means of simulating, analyzing, and understanding complex geological processes. Plants and light are major components of the geographic environment. Light is a critical factor that affects ecological systems. In this study, we focused on simulating light transmission and distribution within a three-dimensional plant canopy model. A progressive refinement radiosity algorithm was applied to simulate the transmission and distribution of solar light within a detailed, three-dimensional (3D loquat (Eriobotrya japonica Lindl. canopy model. The canopy was described in three dimensions, and each organ surface was represented by a set of triangular facets. The form factors in radiosity were calculated using a hemi-cube algorithm. We developed a module for simulating the instantaneous light distribution within a virtual canopy, which was integrated into ParaTree. We simulated the distribution of photosynthetically active radiation (PAR within a loquat canopy, and calculated the total PAR intercepted at the whole canopy scale, as well as the mean PAR interception per unit leaf area. The ParaTree-integrated radiosity model simulates the uncollided propagation of direct solar and diffuse sky light and the light-scattering effect of foliage. The PAR captured by the whole canopy based on the radiosity is approximately 9.4% greater than that obtained using ray tracing and TURTLE methods. The latter methods do not account for the scattering among leaves in the canopy in the study, and therefore, the difference might be due to the contribution of light scattering in the foliage. The simulation result is close to Myneni’s findings, in which the light scattering within a canopy is less than 10% of the incident PAR. Our method can be employed for visualizing and analyzing the spatial distribution of light within a canopy, and for estimating the PAR interception at the organ and canopy

  14. Three dimensional numerical investigation of flow mixing in curved tubes and mass transfer in T-channel junction

    International Nuclear Information System (INIS)

    Pandey, Pradeep; Nayak, A.K.; Vijayan, P.K.

    2014-01-01

    Three dimensional flow patterns appearing in geometries such as curved pipes and T-channel junctions have important applications and are attractive for research. Unlike the flow in a straight tube, fluid motion in a curved tube is not parallel to the axis of bend, owing to the presence of centrifugal effects. It is characterized by a secondary flow in a cross-sectional plane normal to the main flow. Consequently, secondary flow separation near the inner wall is observed in the developing region. The strength of the secondary flow is greatly influenced by the curvature ratio and in turn, a non-dimensional parameter called the Dean Number. Secondary flow increases flow resistance, resulting in a larger pressure drop along the bend. The location of the maximum axial velocity gets shifted towards the outer wall. Flow in a T-channel junction is also a configuration of great significance. The simulations of the present work show that flow at low Reynolds numbers (Re ≤ 115) is steady and symmetric. For low Reynolds numbers, flow in the downstream channel remains highly segregated about the centerline. The appearance of vortices in the T-channel junction does little to redistribute concentration when flow remains symmetric. With increasing Reynolds number, transition takes place towards asymmetric flow. The incoming flow field gets redistributed at the center-plane and the dividing streamline becomes increasingly distorted. The flow field is characterized by thin elongated fluid interfaces across which momentum diffusion takes place. Flow at higher Reynolds numbers (Re ≥ 250) becomes unsteady in which unstable stagnation stream traces move periodically leftward and rightward at top and bottom walls. Trajectories of mass-less particles show greater dwelling in the junction as compared to those of finite mass particle. The numerical simulation is carried out in the present work using ANUPRAVAHA, a general purpose CFD solver developed at IIT Kanpur in collaboration with

  15. A simple three-dimensional macroscopic root water uptake model based on the hydraulic architecture approach

    Directory of Open Access Journals (Sweden)

    V. Couvreur

    2012-08-01

    Full Text Available Many hydrological models including root water uptake (RWU do not consider the dimension of root system hydraulic architecture (HA because explicitly solving water flow in such a complex system is too time consuming. However, they might lack process understanding when basing RWU and plant water stress predictions on functions of variables such as the root length density distribution. On the basis of analytical solutions of water flow in a simple HA, we developed an "implicit" model of the root system HA for simulation of RWU distribution (sink term of Richards' equation and plant water stress in three-dimensional soil water flow models. The new model has three macroscopic parameters defined at the soil element scale, or at the plant scale, rather than for each segment of the root system architecture: the standard sink fraction distribution SSF, the root system equivalent conductance Krs and the compensatory RWU conductance Kcomp. It clearly decouples the process of water stress from compensatory RWU, and its structure is appropriate for hydraulic lift simulation. As compared to a model explicitly solving water flow in a realistic maize root system HA, the implicit model showed to be accurate for predicting RWU distribution and plant collar water potential, with one single set of parameters, in dissimilar water dynamics scenarios. For these scenarios, the computing time of the implicit model was a factor 28 to 214 shorter than that of the explicit one. We also provide a new expression for the effective soil water potential sensed by plants in soils with a heterogeneous water potential distribution, which emerged from the implicit model equations. With the proposed implicit model of the root system HA, new concepts are brought which open avenues towards simple and mechanistic RWU models and water stress functions operational for field scale water dynamics simulation.

  16. Hormonal regulation of epithelial organization in a three-dimensional breast tissue culture model.

    Science.gov (United States)

    Speroni, Lucia; Whitt, Gregory S; Xylas, Joanna; Quinn, Kyle P; Jondeau-Cabaton, Adeline; Barnes, Clifford; Georgakoudi, Irene; Sonnenschein, Carlos; Soto, Ana M

    2014-01-01

    The establishment of hormone target breast cells in the 1970's resulted in suitable models for the study of hormone control of cell proliferation and gene expression using two-dimensional (2D) cultures. However, to study mammogenesis and breast tumor development in vitro, cells must be able to organize in three-dimensional (3D) structures like in the tissue. We now report the development of a hormone-sensitive 3D culture model for the study of mammogenesis and neoplastic development. Hormone-sensitive T47D breast cancer cells respond to estradiol in a dose-dependent manner by forming complex epithelial structures. Treatment with the synthetic progestagen promegestone, in the presence of estradiol, results in flat epithelial structures that display cytoplasmic projections, a phenomenon reported to precede side-branching. Additionally, as in the mammary gland, treatment with prolactin in the presence of estradiol induces budding structures. These changes in epithelial organization are accompanied by collagen remodeling. Collagen is the major acellular component of the breast stroma and an important player in tumor development and progression. Quantitative analysis of second harmonic generation of collagen fibers revealed that collagen density was more variable surrounding budding and irregularly shaped structures when compared to more regular structures; suggesting that fiber organization in the former is more anisotropic than in the latter. In sum, this new 3D model recapitulates morphogenetic events modulated by mammogenic hormones in the breast, and is suitable for the evaluation of therapeutic agents.

  17. Improved water resource management for a highly complex environment using three-dimensional groundwater modelling

    Science.gov (United States)

    Moeck, Christian; Affolter, Annette; Radny, Dirk; Dressmann, Horst; Auckenthaler, Adrian; Huggenberger, Peter; Schirmer, Mario

    2018-02-01

    A three-dimensional groundwater model was used to improve water resource management for a study area in north-west Switzerland, where drinking-water production is close to former landfills and industrial areas. To avoid drinking-water contamination, artificial groundwater recharge with surface water is used to create a hydraulic barrier between the contaminated sites and drinking-water extraction wells. The model was used for simulating existing and proposed water management strategies as a tool to ensure the utmost security for drinking water. A systematic evaluation of the flow direction between existing observation points using a developed three-point estimation method for a large number of scenarios was carried out. It is demonstrated that systematically applying the developed methodology helps to identify vulnerable locations which are sensitive to changing boundary conditions such as those arising from changes to artificial groundwater recharge rates. At these locations, additional investigations and protection are required. The presented integrated approach, using the groundwater flow direction between observation points, can be easily transferred to a variety of hydrological settings to systematically evaluate groundwater modelling scenarios.

  18. End to End Digitisation and Analysis of Three-Dimensional Coral Models, from Communities to Corallites.

    Directory of Open Access Journals (Sweden)

    Luis Gutierrez-Heredia

    Full Text Available Coral reefs hosts nearly 25% of all marine species and provide food sources for half a billion people worldwide while only a very small percentage have been surveyed. Advances in technology and processing along with affordable underwater cameras and Internet availability gives us the possibility to provide tools and softwares to survey entire coral reefs. Holistic ecological analyses of corals require not only the community view (10s to 100s of meters, but also the single colony analysis as well as corallite identification. As corals are three-dimensional, classical approaches to determine percent cover and structural complexity across spatial scales are inefficient, time-consuming and limited to experts. Here we propose an end-to-end approach to estimate these parameters using low-cost equipment (GoPro, Canon and freeware (123D Catch, Meshmixer and Netfabb, allowing every community to participate in surveys and monitoring of their coral ecosystem. We demonstrate our approach on 9 species of underwater colonies in ranging size and morphology. 3D models of underwater colonies, fresh samples and bleached skeletons with high quality texture mapping and detailed topographic morphology were produced, and Surface Area and Volume measurements (parameters widely used for ecological and coral health studies were calculated and analysed. Moreover, we integrated collected sample models with micro-photogrammetry models of individual corallites to aid identification and colony and polyp scale analysis.

  19. End to End Digitisation and Analysis of Three-Dimensional Coral Models, from Communities to Corallites.

    Science.gov (United States)

    Gutierrez-Heredia, Luis; Benzoni, Francesca; Murphy, Emma; Reynaud, Emmanuel G

    2016-01-01

    Coral reefs hosts nearly 25% of all marine species and provide food sources for half a billion people worldwide while only a very small percentage have been surveyed. Advances in technology and processing along with affordable underwater cameras and Internet availability gives us the possibility to provide tools and softwares to survey entire coral reefs. Holistic ecological analyses of corals require not only the community view (10s to 100s of meters), but also the single colony analysis as well as corallite identification. As corals are three-dimensional, classical approaches to determine percent cover and structural complexity across spatial scales are inefficient, time-consuming and limited to experts. Here we propose an end-to-end approach to estimate these parameters using low-cost equipment (GoPro, Canon) and freeware (123D Catch, Meshmixer and Netfabb), allowing every community to participate in surveys and monitoring of their coral ecosystem. We demonstrate our approach on 9 species of underwater colonies in ranging size and morphology. 3D models of underwater colonies, fresh samples and bleached skeletons with high quality texture mapping and detailed topographic morphology were produced, and Surface Area and Volume measurements (parameters widely used for ecological and coral health studies) were calculated and analysed. Moreover, we integrated collected sample models with micro-photogrammetry models of individual corallites to aid identification and colony and polyp scale analysis.

  20. Vertex shading of the three-dimensional model based on ray-tracing algorithm

    Science.gov (United States)

    Hu, Xiaoming; Sang, Xinzhu; Xing, Shujun; Yan, Binbin; Wang, Kuiru; Dou, Wenhua; Xiao, Liquan

    2016-10-01

    Ray Tracing Algorithm is one of the research hotspots in Photorealistic Graphics. It is an important light and shadow technology in many industries with the three-dimensional (3D) structure, such as aerospace, game, video and so on. Unlike the traditional method of pixel shading based on ray tracing, a novel ray tracing algorithm is presented to color and render vertices of the 3D model directly. Rendering results are related to the degree of subdivision of the 3D model. A good light and shade effect is achieved by realizing the quad-tree data structure to get adaptive subdivision of a triangle according to the brightness difference of its vertices. The uniform grid algorithm is adopted to improve the rendering efficiency. Besides, the rendering time is independent of the screen resolution. In theory, as long as the subdivision of a model is adequate, cool effects as the same as the way of pixel shading will be obtained. Our practical application can be compromised between the efficiency and the effectiveness.

  1. Elucidating cytochrome C release from mitochondria: insights from an in silico three-dimensional model.

    Science.gov (United States)

    Tam, Zhi Yang; Cai, Yi Hui; Gunawan, Rudiyanto

    2010-11-17

    Mitochondrial regulation of apoptosis depends on the programmed release of proapoptotic proteins such as cytochrome c (Cyt c) through the outer mitochondrial membrane (OMM). Although a few key processes involved in this release have been identified, including the liberation of inner membrane-bound Cyt c and formation of diffusible pores on the OMM, other details like the transport of Cyt c within complex mitochondrial compartments, e.g., the cristae and crista junctions, are not yet fully understood (to our knowledge). In particular, a remodeling of the inner mitochondrial membrane accompanying apoptosis seen in a few studies, in which crista junctions widen, has been hypothesized to be a necessary step in the Cyt c release. Using a three-dimensional spatial modeling of mitochondrial crista and the crista junction, model simulations and analysis illustrated how the interplay among solubilization of Cyt c, fast diffusion of Cyt c, and OMM permeabilization gives rise to the observed experimental release profile. Importantly, the widening of the crista junction was found to have a negligible effect on the transport of free Cyt c from cristae. Finally, model simulations showed that increasing the fraction of free/loosely-bound Cyt c can sensitize the cell to apoptotic stimuli in a threshold manner, which may explain increased sensitivity to cell death associated with aging. Copyright © 2010 Biophysical Society. Published by Elsevier Inc. All rights reserved.

  2. Three-dimensional (3D) printed endovascular simulation models: a feasibility study.

    Science.gov (United States)

    Mafeld, Sebastian; Nesbitt, Craig; McCaslin, James; Bagnall, Alan; Davey, Philip; Bose, Pentop; Williams, Rob

    2017-02-01

    Three-dimensional (3D) printing is a manufacturing process in which an object is created by specialist printers designed to print in additive layers to create a 3D object. Whilst there are initial promising medical applications of 3D printing, a lack of evidence to support its use remains a barrier for larger scale adoption into clinical practice. Endovascular virtual reality (VR) simulation plays an important role in the safe training of future endovascular practitioners, but existing VR models have disadvantages including cost and accessibility which could be addressed with 3D printing. This study sought to evaluate the feasibility of 3D printing an anatomically accurate human aorta for the purposes of endovascular training. A 3D printed model was successfully designed and printed and used for endovascular simulation. The stages of development and practical applications are described. Feedback from 96 physicians who answered a series of questions using a 5 point Likert scale is presented. Initial data supports the value of 3D printed endovascular models although further educational validation is required.

  3. Predicting drought propagation within peat layers using a three dimensionally explicit voxel based model

    Science.gov (United States)

    Condro, A. A.; Pawitan, H.; Risdiyanto, I.

    2018-05-01

    Peatlands are very vulnerable to widespread fires during dry seasons, due to availability of aboveground fuel biomass on the surface and belowground fuel biomass on the sub-surface. Hence, understanding drought propagation occurring within peat layers is crucial with regards to disaster mitigation activities on peatlands. Using a three dimensionally explicit voxel-based model of peatland hydrology, this study predicted drought propagation time lags into sub-surface peat layers after drought events occurrence on the surface of about 1 month during La-Nina and 2.5 months during El-Nino. The study was carried out on a high-conservation-value area of oil palm plantation in West Kalimantan. Validity of the model was evaluated and its applicability for disaster mitigation was discussed. The animations of simulated voxels are available at: goo.gl/HDRMYN (El-Nino 2015 episode) and goo.gl/g1sXPl (La-Nina 2016 episode). The model is available at: goo.gl/RiuMQz.

  4. Three-dimensional random resistor-network model for solid oxide fuel cell composite electrodes

    International Nuclear Information System (INIS)

    Abbaspour, Ali; Luo Jingli; Nandakumar, K.

    2010-01-01

    A three-dimensional reconstruction of solid oxide fuel cell (SOFC) composite electrodes was developed to evaluate the performance and further investigate the effect of microstructure on the performance of SOFC electrodes. Porosity of the electrode is controlled by adding pore former particles (spheres) to the electrode and ignoring them in analysis step. To enhance connectivity between particles and increase the length of triple-phase boundary (TPB), sintering process is mimicked by enlarging particles to certain degree after settling them inside the packing. Geometrical characteristics such as length of TBP and active contact area as well as porosity can easily be calculated using the current model. Electrochemical process is simulated using resistor-network model and complete Butler-Volmer equation is used to deal with charge transfer process on TBP. The model shows that TPBs are not uniformly distributed across the electrode and location of TPBs as well as amount of electrochemical reaction is not uniform. Effects of electrode thickness, particle size ratio, electron and ion conductor conductivities and rate of electrochemical reaction on overall electrochemical performance of electrode are investigated.

  5. Three-dimensional microstructure-based micromechanical modeling for TC6 titanium alloy

    Energy Technology Data Exchange (ETDEWEB)

    Li, Guoju; Shi, Ran [School of Materials Science and Engineering, Beijing Institute of Technology, Beijing 100081 (China); National Key Laboratory of Science and Technology on Materials Under Shock and Impact, Beijing 100081 (China); Fan, Qunbo, E-mail: fanqunbo@bit.edu.cn [School of Materials Science and Engineering, Beijing Institute of Technology, Beijing 100081 (China); National Key Laboratory of Science and Technology on Materials Under Shock and Impact, Beijing 100081 (China); Xia, Yumeng; Zhang, Hongmei [School of Materials Science and Engineering, Beijing Institute of Technology, Beijing 100081 (China); National Key Laboratory of Science and Technology on Materials Under Shock and Impact, Beijing 100081 (China)

    2017-02-08

    A new in-depth evaluation of the micromechanical response of TC6 (Ti–6Al–1.5Cr–2.5Mo–0.5Fe–0.3Si) titanium alloy subjected to uniaxial tensile loading is performed based on micromechanical modeling. This evaluation includes reconstruction of the three-dimensional annealed microstructure (annealing at 800 °C for 2 h, then air cooled) of the alloy via dual-energy micro-computed tomography. In addition, constitutive relations of the constituent phases were determined via synchrotron-based in-situ high-energy X-ray diffraction and a self-consistent model as well as nanoindentation tests combined with finite element modeling. The results revealed that the stress concentration was translated from the primary α phase to the secondary α phase, then to the β phase. Moreover, the stress generated was re-transferred to the primary α phase when the strain was increased from 0.00 to 0.05. This transfer is indicative of crack initiation in the primary α grains.

  6. In vitro three-dimensional cancer metastasis modeling: Past, present, and future

    International Nuclear Information System (INIS)

    Han Wei-jing; Zhu Jiang-rui; Fan Qihui; Liu Li-yu; Yuan Wei; Qu Junle

    2016-01-01

    Metastasis is the leading cause of most cancer deaths, as opposed to dysregulated cell growth of the primary tumor. Molecular mechanisms of metastasis have been studied for decades and the findings have evolved our understanding of the progression of malignancy. However, most of the molecular mechanisms fail to address the causes of cancer and its evolutionary origin, demonstrating an inability to find a solution for complete cure of cancer. After being a neglected area of tumor biology for quite some time, recently several studies have focused on the impact of the tumor microenvironment on cancer growth. The importance of the tumor microenvironment is gradually gaining attention, particularly from the perspective of biophysics. In vitro three-dimensional (3-D) metastatic models are an indispensable platform for investigating the tumor microenvironment, as they mimic the in vivo tumor tissue. In 3-D metastatic in vitro models, static factors such as the mechanical properties, biochemical factors, as well as dynamic factors such as cell–cell, cell–ECM interactions, and fluid shear stress can be studied quantitatively. With increasing focus on basic cancer research and drug development, the in vitro 3-D models offer unique advantages in fundamental and clinical biomedical studies. (topical review)

  7. Transient three-dimensional thermal-hydraulic analysis of nuclear reactor fuel rod arrays: general equations and numerical scheme

    International Nuclear Information System (INIS)

    Wnek, W.J.; Ramshaw, J.D.; Trapp, J.A.; Hughes, E.D.; Solbrig, C.W.

    1975-11-01

    A mathematical model and a numerical solution scheme for thermal-hydraulic analysis of fuel rod arrays are given. The model alleviates the two major deficiencies associated with existing rod array analysis models, that of a correct transverse momentum equation and the capability of handling reversing and circulatory flows. Possible applications of the model include steady state and transient subchannel calculations as well as analysis of flows in heat exchangers, other engineering equipment, and porous media

  8. Modeling extreme "Carrington-type" space weather events using three-dimensional global MHD simulations

    Science.gov (United States)

    Ngwira, Chigomezyo M.; Pulkkinen, Antti; Kuznetsova, Maria M.; Glocer, Alex

    2014-06-01

    There is a growing concern over possible severe societal consequences related to adverse space weather impacts on man-made technological infrastructure. In the last two decades, significant progress has been made toward the first-principles modeling of space weather events, and three-dimensional (3-D) global magnetohydrodynamics (MHD) models have been at the forefront of this transition, thereby playing a critical role in advancing our understanding of space weather. However, the modeling of extreme space weather events is still a major challenge even for the modern global MHD models. In this study, we introduce a specially adapted University of Michigan 3-D global MHD model for simulating extreme space weather events with a Dst footprint comparable to the Carrington superstorm of September 1859 based on the estimate by Tsurutani et. al. (2003). Results are presented for a simulation run with "very extreme" constructed/idealized solar wind boundary conditions driving the magnetosphere. In particular, we describe the reaction of the magnetosphere-ionosphere system and the associated induced geoelectric field on the ground to such extreme driving conditions. The model setup is further tested using input data for an observed space weather event of Halloween storm October 2003 to verify the MHD model consistence and to draw additional guidance for future work. This extreme space weather MHD model setup is designed specifically for practical application to the modeling of extreme geomagnetically induced electric fields, which can drive large currents in ground-based conductor systems such as power transmission grids. Therefore, our ultimate goal is to explore the level of geoelectric fields that can be induced from an assumed storm of the reported magnitude, i.e., Dst˜=-1600 nT.

  9. Three-dimensional Subsurface Geological Modeling of the Western Osaka Plane based on Borehole Data

    Science.gov (United States)

    Nonogaki, S.; Masumoto, S.; Nemoto, T.

    2012-12-01

    Three-dimensional (3D) geological model of subsurface structure plays an important role in developing infrastructures. In particular, the 3D geological model in urban area is quite helpful to solve social problems such as underground utilization, environmental preservation, and disaster assessment. Over the past few years, many studies have been made on algorithms for 3D geological modeling. However, most of them have given little attention to objectivity of the model and traceability of modeling procedures. The purpose of this study is to develop an algorithm for constructing a 3D geological model objectively and for maintaining high-traceability of modeling procedures. For the purpose of our work, we proposed a new algorithm for 3D geological modeling using gridded geological boundary surfaces and the "logical model of geologic structure". The geological boundary surface is given by a form of Digital Elevation Model (DEM). The DEM is generated based on geological information such as elevation, strike and dip by using a unique spline-fitting method. The logical model of geological structure is a mathematical model that defines a positional relation between geological boundary surfaces and geological units. The model is objectively given by recurrence formula derived from a sequence of geological events arranged in chronological order. We applied the proposed algorithm into constructing a 3D subsurface geological model of the western Osaka Plane, southwest Japan. The data used for 3D geological modeling is a set of borehole data provided by Osaka City and Kansai Geoinformatics Agency. As a result, we constructed a 3D model consistent with the subjective model reported in other studies. In addition, all information necessary for modeling, such as the used geological information, the parameters of surface fitting, and the logical model, was stored in text files. In conclusion, we can not only construct 3D geological model objectively but also maintain high

  10. Scapular flap for maxillectomy defect reconstruction and preliminary results using three-dimensional modeling.

    Science.gov (United States)

    Modest, Mara C; Moore, Eric J; Abel, Kathryn M Van; Janus, Jeffrey R; Sims, John R; Price, Daniel L; Olsen, Kerry D

    2017-01-01

    Discuss current techniques utilizing the scapular tip and subscapular system for free tissue reconstruction of maxillary defects and highlight the impact of medical modeling on these techniques with a case series. Case review series at an academic hospital of patients undergoing maxillectomy + thoracodorsal scapula composite free flap (TSCF) reconstruction. Three-dimensional (3D) models were used in the last five cases. 3D modeling, surgical, functional, and aesthetic outcomes were reviewed. Nine patients underwent TSCF reconstruction for maxillectomy defects (median age = 43 years; range, 19-66 years). Five patients (55%) had a total maxillectomy (TM) ± orbital exenteration, whereas four patients (44%) underwent subtotal palatal maxillectomy. For TM, the contralateral scapula tip was positioned with its natural concavity recreating facial contour. The laterally based vascular pedicle was ideally positioned for facial vessel anastomosis. For subtotal-palatal defect, an ipsilateral flap was harvested, but inset with the convex surface facing superiorly. Once 3D models were available from our anatomic modeling lab, they were used for intraoperative planning of the last five patients. Use of the model intraoperatively improved efficiency and allowed for better contouring/plating of the TSCF. At last follow-up, all patients had good functional outcomes. Aesthetic outcomes were more successful in patients where 3D-modeling was used (100% vs. 50%). There were no flap failures. Median follow-up >1 month was 5.2 months (range, 1-32.7 months). Reconstruction of maxillectomy defects is complex. Successful aesthetic and functional outcomes are critical to patient satisfaction. The TSCF is a versatile flap. Based on defect type, choosing laterality is crucial for proper vessel orientation and outcomes. The use of internally produced 3D models has helped refine intraoperative contouring and flap inset, leading to more successful outcomes. 4. Laryngoscope, 127:E8-E14

  11. Three-Dimensional Water and Carbon Cycle Modeling at High Spatial-Temporal Resolutions

    Science.gov (United States)

    Liao, C.; Zhuang, Q.

    2017-12-01

    Terrestrial ecosystems in cryosphere are very sensitive to the global climate change due to the presence of snow covers, mountain glaciers and permafrost, especially when the increase in near surface air temperature is almost twice as large as the global average. However, few studies have investigated the water and carbon cycle dynamics using process-based hydrological and biogeochemistry modeling approach. In this study, we used three-dimensional modeling approach at high spatial-temporal resolutions to investigate the water and carbon cycle dynamics for the Tanana Flats Basin in interior Alaska with emphases on dissolved organic carbon (DOC) dynamics. The results have shown that: (1) lateral flow plays an important role in water and carbon cycle, especially in dissolved organic carbon (DOC) dynamics. (2) approximately 2.0 × 104 kg C yr-1 DOC is exported to the hydrological networks and it compromises 1% and 0.01% of total annual gross primary production (GPP) and total organic carbon stored in soil, respectively. This study has established an operational and flexible framework to investigate and predict the water and carbon cycle dynamics under the changing climate.

  12. Continuous data assimilation for the three-dimensional Brinkman–Forchheimer-extended Darcy model

    KAUST Repository

    Markowich, Peter A.; Titi, Edriss S; Trabelsi, Saber

    2016-01-01

    In this paper we introduce and analyze an algorithm for continuous data assimilation for a three-dimensional Brinkman-Forchheimer-extended Darcy (3D BFeD) model of porous media. This model is believed to be accurate when the flow velocity is too large for Darcy's law to be valid, and additionally the porosity is not too small. The algorithm is inspired by ideas developed for designing finite-parameters feedback control for dissipative systems. It aims to obtain improved estimates of the state of the physical system by incorporating deterministic or noisy measurements and observations. Specifically, the algorithm involves a feedback control that nudges the large scales of the approximate solution toward those of the reference solution associated with the spatial measurements. In the first part of the paper, we present a few results of existence and uniqueness of weak and strong solutions of the 3D BFeD system. The second part is devoted to the convergence analysis of the data assimilation algorithm. © 2016 IOP Publishing Ltd & London Mathematical Society.

  13. Three-dimensional modelling of thermal stress in floating zone silicon crystal growth

    Science.gov (United States)

    Plate, Matiss; Krauze, Armands; Virbulis, Jānis

    2018-05-01

    During the growth of large diameter silicon single crystals with the industrial floating zone method, undesirable level of thermal stress in the crystal is easily reached due to the inhomogeneous expansion as the crystal cools down. Shapes of the phase boundaries, temperature field and elastic material properties determine the thermal stress distribution in the solid mono crystalline silicon during cylindrical growth. Excessive stress can lead to fracture, generation of dislocations and altered distribution of intrinsic point defects. Although appearance of ridges on the crystal surface is the decisive factor of a dislocation-free growth, the influence of these ridges on the stress field is not completely clear. Here we present the results of thermal stress analysis for 4” and 5” diameter crystals using a quasi-stationary three dimensional mathematical model including the material anisotropy and the presence of experimentally observed ridges which cannot be addressed with axis-symmetric models. The ridge has a local but relatively strong influence on thermal stress therefore its relation to the origin of fracture is hypothesized. In addition, thermal stresses at the crystal rim are found to increase for a particular position of the crystal radiation reflector.

  14. Advanced three-dimensional thermal modeling of a baseline spent fuel repository

    International Nuclear Information System (INIS)

    Altenbach, T.J.; Lowry, W.E.

    1980-01-01

    A three-dimensional thermal analysis using finite difference techniques was performed to determine the near-field response of a baseline spent fuel repository in a deep geologic salt medium. A baseline design incorporates previous thermal modeling experience and OWI recommendations for areal thermal loading in specifying the waste form properties, package details, and emplacement configuration. The base case in this thermal analysis considers one 10-year old PWR spent fuel assembly emplaced to yield a 36 kW/acre (8.9 W/m 2 ) loading. A unit cell model in an infinite array is used to simplify the problem and provide upper-bound temperatures. Boundary conditions are imposed which allow simulations to 1000 years. Variations studied include a comparison of ventilated and unventilated storage room conditions, emplacement packages with and without air gaps surrounding the canister, and room cool-down scenarios with ventilation following an unventilated state for retrieval purposes. It was found that at this low-power level, ventilating the emplacement room has an immediate cooling influence on the canister and effectively maintains the emplacement room floor near the temperature of the ventilating air

  15. A Flexible Fringe Projection Vision System with Extended Mathematical Model for Accurate Three-Dimensional Measurement

    Directory of Open Access Journals (Sweden)

    Suzhi Xiao

    2016-04-01

    Full Text Available In order to acquire an accurate three-dimensional (3D measurement, the traditional fringe projection technique applies complex and laborious procedures to compensate for the errors that exist in the vision system. However, the error sources in the vision system are very complex, such as lens distortion, lens defocus, and fringe pattern nonsinusoidality. Some errors cannot even be explained or rendered with clear expressions and are difficult to compensate directly as a result. In this paper, an approach is proposed that avoids the complex and laborious compensation procedure for error sources but still promises accurate 3D measurement. It is realized by the mathematical model extension technique. The parameters of the extended mathematical model for the ’phase to 3D coordinates transformation’ are derived using the least-squares parameter estimation algorithm. In addition, a phase-coding method based on a frequency analysis is proposed for the absolute phase map retrieval to spatially isolated objects. The results demonstrate the validity and the accuracy of the proposed flexible fringe projection vision system on spatially continuous and discontinuous objects for 3D measurement.

  16. A Flexible Fringe Projection Vision System with Extended Mathematical Model for Accurate Three-Dimensional Measurement.

    Science.gov (United States)

    Xiao, Suzhi; Tao, Wei; Zhao, Hui

    2016-04-28

    In order to acquire an accurate three-dimensional (3D) measurement, the traditional fringe projection technique applies complex and laborious procedures to compensate for the errors that exist in the vision system. However, the error sources in the vision system are very complex, such as lens distortion, lens defocus, and fringe pattern nonsinusoidality. Some errors cannot even be explained or rendered with clear expressions and are difficult to compensate directly as a result. In this paper, an approach is proposed that avoids the complex and laborious compensation procedure for error sources but still promises accurate 3D measurement. It is realized by the mathematical model extension technique. The parameters of the extended mathematical model for the 'phase to 3D coordinates transformation' are derived using the least-squares parameter estimation algorithm. In addition, a phase-coding method based on a frequency analysis is proposed for the absolute phase map retrieval to spatially isolated objects. The results demonstrate the validity and the accuracy of the proposed flexible fringe projection vision system on spatially continuous and discontinuous objects for 3D measurement.

  17. Methylquercetins stimulate melanin biosynthesis in a three-dimensional skin model.

    Science.gov (United States)

    Yamauchi, Kosei; Mitsunaga, Tohru

    2018-03-01

    In a previous study, we found that both synthetic 3-O-methylquercetin (3MQ) and 3,4',7-O-trimethylquercetin (34'7TMQ) increased extracellular melanin content. 34'7TMQ increased the activity of melanogenic enzymes by stimulating the p38 pathway and the expression of microphthalmia-associated transcription factor (MITF). In contrast, 3MQ increased the activity of melanogenic enzymes without the involvement of MITF, which suggests that 3MQ inhibits the degradation of melanogenic enzymes. In the present study, we investigated the effects of 3MQ and 34'7TMQ on melanogenesis in normal human melanocytes and using a commercial three-dimensional (3D) skin model system. Both 3MQ and 34'7TMQ elongated the dendrites of normal human melanocytes from a Caucasian donor, but did not stimulate melanogenesis in the melanocytes. In the 3D skin model, which included melanocytes from an Asian donor, 3MQ and 34'7TMQ increased and elongated the melanocytes and showed a tendency to stimulate melanogenesis. These results suggest that 3MQ and 34'7TMQ could be put to practical use in skin care products and agents aimed at preventing hair graying.

  18. Continuous data assimilation for the three-dimensional Brinkman-Forchheimer-extended Darcy model

    Science.gov (United States)

    Markowich, Peter A.; Titi, Edriss S.; Trabelsi, Saber

    2016-04-01

    In this paper we introduce and analyze an algorithm for continuous data assimilation for a three-dimensional Brinkman-Forchheimer-extended Darcy (3D BFeD) model of porous media. This model is believed to be accurate when the flow velocity is too large for Darcy’s law to be valid, and additionally the porosity is not too small. The algorithm is inspired by ideas developed for designing finite-parameters feedback control for dissipative systems. It aims to obtain improved estimates of the state of the physical system by incorporating deterministic or noisy measurements and observations. Specifically, the algorithm involves a feedback control that nudges the large scales of the approximate solution toward those of the reference solution associated with the spatial measurements. In the first part of the paper, we present a few results of existence and uniqueness of weak and strong solutions of the 3D BFeD system. The second part is devoted to the convergence analysis of the data assimilation algorithm.

  19. Continuous data assimilation for the three-dimensional Brinkman–Forchheimer-extended Darcy model

    KAUST Repository

    Markowich, Peter A.

    2016-03-09

    In this paper we introduce and analyze an algorithm for continuous data assimilation for a three-dimensional Brinkman-Forchheimer-extended Darcy (3D BFeD) model of porous media. This model is believed to be accurate when the flow velocity is too large for Darcy\\'s law to be valid, and additionally the porosity is not too small. The algorithm is inspired by ideas developed for designing finite-parameters feedback control for dissipative systems. It aims to obtain improved estimates of the state of the physical system by incorporating deterministic or noisy measurements and observations. Specifically, the algorithm involves a feedback control that nudges the large scales of the approximate solution toward those of the reference solution associated with the spatial measurements. In the first part of the paper, we present a few results of existence and uniqueness of weak and strong solutions of the 3D BFeD system. The second part is devoted to the convergence analysis of the data assimilation algorithm. © 2016 IOP Publishing Ltd & London Mathematical Society.

  20. Attempt to develop taste bud models in three-dimensional culture.

    Science.gov (United States)

    Nishiyama, Miyako; Yuki, Saori; Fukano, Chiharu; Sako, Hideyuki; Miyamoto, Takenori; Tomooka, Yasuhiro

    2011-09-01

    Taste buds are the end organs of taste located in the gustatory papillae, which occur on the surface of the oral cavity. The goal of the present study was to establish a culture model mimicking the lingual taste bud of the mouse. To this end, three cell lines were employed: taste bud-derived cell lines (TBD cell lines), a lingual epithelial cell-derived cell line (20A cell line), and a mesenchymal cell-derived cell line (TMD cell line). TBD cells embedded in collagen gel formed three-dimensional clusters, which had an internal cavity equipped with a tight junction-like structure, a microvilluslike structure, and a laminin-positive layer surrounding the cluster. The cells with this epitheliumlike morphology expressed marker proteins of taste cells: gustducin and NCAM. TBD cells formed a monolayer on collagen gel when they were co-cultured with TMD cells. TBD, 20A, and TMD cell lines were maintained in a triple cell co-culture, in which TBD cells were pre-seeded as aggregates or in suspension on the collagen gel containing TMD cells, and 20A cells were laid over the TBD cells. TBD cells in the triple cell co-culture expressed NCAM. This result suggests that co-cultured TBD cells exhibited a characteristic of Type III taste cells. The culture model would be useful to study morphogenesis and functions of the gustatory organ.

  1. Planning corrective osteotomy of the femoral bone using three-dimensional modeling. Part II

    Directory of Open Access Journals (Sweden)

    Vladimir E. Baskov

    2017-10-01

    Full Text Available Introduction. Three-dimensional (3D modeling and prototyping are increasingly being used in various branches of surgery for planning and performing surgical interventions. In orthopedics, this technology was first used in 1990 for performing knee-joint surgery. This was followed by the development of protocols for creating and applying individual patterns for navigation in the surgical interventions for various bones. Aim. The study aimed to develop a new 3D method for planning and performing corrective osteotomy of the femoral bone using an individual pattern and to identify the advantages of the proposed method in comparison with the standard method of planning and performing surgical intervention. Materials and methods. A new method for planning and performing corrective osteotomy of the femoral bone in children with various pathologies of the hip joint is presented. The outcomes of planning and performing corrective osteotomy of the femoral bone in 27 patients aged 5 to 18 years (32 hip joints with congenital and acquired deformity of the femoral bone were analyzed. Conclusion. The use of computer 3D modeling for planning and implementing corrective interventions on the femoral bone improves the treatment results owing to an almost perfect performance accuracy achieved by the minimization of possible human errors reduction in the surgery duration; and reduction in the radiation exposure for the patient.

  2. Regional three-dimensional seismic velocity model of the crust and uppermost mantle of northern California

    Science.gov (United States)

    Thurber, C.; Zhang, H.; Brocher, T.; Langenheim, V.

    2009-01-01

    We present a three-dimensional (3D) tomographic model of the P wave velocity (Vp) structure of northern California. We employed a regional-scale double-difference tomography algorithm that incorporates a finite-difference travel time calculator and spatial smoothing constraints. Arrival times from earthquakes and travel times from controlled-source explosions, recorded at network and/or temporary stations, were inverted for Vp on a 3D grid with horizontal node spacing of 10 to 20 km and vertical node spacing of 3 to 8 km. Our model provides an unprecedented, comprehensive view of the regional-scale structure of northern California, putting many previously identified features into a broader regional context and improving the resolution of a number of them and revealing a number of new features, especially in the middle and lower crust, that have never before been reported. Examples of the former include the complex subducting Gorda slab, a steep, deeply penetrating fault beneath the Sacramento River Delta, crustal low-velocity zones beneath Geysers-Clear Lake and Long Valley, and the high-velocity ophiolite body underlying the Great Valley. Examples of the latter include mid-crustal low-velocity zones beneath Mount Shasta and north of Lake Tahoe. Copyright 2009 by the American Geophysical Union.

  3. Modeling, Control and Simulation of Three-Dimensional Robotic Systems with Applications to Biped Locomotion.

    Science.gov (United States)

    Zheng, Yuan-Fang

    A three-dimensional, five link biped system is established. Newton-Euler state space formulation is employed to derive the equations of the system. The constraint forces involved in the equations can be eliminated by projection onto a smaller state space system for deriving advanced control laws. A model-referenced adaptive control scheme is developed to control the system. Digital computer simulations of point to point movement are carried out to show that the model-referenced adaptive control increases the dynamic range and speeds up the response of the system in comparison with linear and nonlinear feedback control. Further, the implementation of the controller is simpler. Impact effects of biped contact with the environment are modeled and studied. The instant velocity change at the moment of impact is derived as a function of the biped state and contact speed. The effects of impact on the state, as well as constraints are studied in biped landing on heels and toes simultaneously or on toes first. Rate and nonlinear position feedback are employed for stability of the biped after the impact. The complex structure of the foot is properly modeled. A spring and dashpot pair is suggested to represent the action of plantar fascia during the impact. This action prevents the arch of the foot from collapsing. A mathematical model of the skeletal muscle is discussed. A direct relationship between the stimulus rate and the active state is established. A piecewise linear relation between the length of the contractile element and the isometric force is considered. Hill's characteristic equation is maintained for determining the actual output force during different shortening velocities. A physical threshold model is proposed for recruitment which encompasses the size principle, its manifestations and exceptions to the size principle. Finally the role of spindle feedback in stability of the model is demonstrated by study of a pair of muscles.

  4. Verifying three-dimensional skull model reconstruction using cranial index of symmetry.

    Directory of Open Access Journals (Sweden)

    Woon-Man Kung

    Full Text Available BACKGROUND: Difficulty exists in scalp adaptation for cranioplasty with customized computer-assisted design/manufacturing (CAD/CAM implant in situations of excessive wound tension and sub-cranioplasty dead space. To solve this clinical problem, the CAD/CAM technique should include algorithms to reconstruct a depressed contour to cover the skull defect. Satisfactory CAM-derived alloplastic implants are based on highly accurate three-dimensional (3-D CAD modeling. Thus, it is quite important to establish a symmetrically regular CAD/CAM reconstruction prior to depressing the contour. The purpose of this study is to verify the aesthetic outcomes of CAD models with regular contours using cranial index of symmetry (CIS. MATERIALS AND METHODS: From January 2011 to June 2012, decompressive craniectomy (DC was performed for 15 consecutive patients in our institute. 3-D CAD models of skull defects were reconstructed using commercial software. These models were checked in terms of symmetry by CIS scores. RESULTS: CIS scores of CAD reconstructions were 99.24±0.004% (range 98.47-99.84. CIS scores of these CAD models were statistically significantly greater than 95%, identical to 99.5%, but lower than 99.6% (p<0.001, p = 0.064, p = 0.021 respectively, Wilcoxon matched pairs signed rank test. These data evidenced the highly accurate symmetry of these CAD models with regular contours. CONCLUSIONS: CIS calculation is beneficial to assess aesthetic outcomes of CAD-reconstructed skulls in terms of cranial symmetry. This enables further accurate CAD models and CAM cranial implants with depressed contours, which are essential in patients with difficult scalp adaptation.

  5. Three-dimensional eddy current solution of a polyphase machine test model (abstract)

    Science.gov (United States)

    Pahner, Uwe; Belmans, Ronnie; Ostovic, Vlado

    1994-05-01

    This abstract describes a three-dimensional (3D) finite element solution of a test model that has been reported in the literature. The model is a basis for calculating the current redistribution effects in the end windings of turbogenerators. The aim of the study is to see whether the analytical results of the test model can be found using a general purpose finite element package, thus indicating that the finite element model is accurate enough to treat real end winding problems. The real end winding problems cannot be solved analytically, as the geometry is far too complicated. The model consists of a polyphase coil set, containing 44 individual coils. This set generates a two pole mmf distribution on a cylindrical surface. The rotating field causes eddy currents to flow in the inner massive and conducting rotor. In the analytical solution a perfect sinusoidal mmf distribution is put forward. The finite element model contains 85824 tetrahedra and 16451 nodes. A complex single scalar potential representation is used in the nonconducting parts. The computation time required was 3 h and 42 min. The flux plots show that the field distribution is acceptable. Furthermore, the induced currents are calculated and compared with the values found from the analytical solution. The distribution of the eddy currents is very close to the distribution of the analytical solution. The most important results are the losses, both local and global. The value of the overall losses is less than 2% away from those of the analytical solution. Also the local distribution of the losses is at any given point less than 7% away from the analytical solution. The deviations of the results are acceptable and are partially due to the fact that the sinusoidal mmf distribution was not modeled perfectly in the finite element method.

  6. Regional Quasi-Three-Dimensional Unsaturated-Saturated Water Flow Model Based on a Vertical-Horizontal Splitting Concept

    Directory of Open Access Journals (Sweden)

    Yan Zhu

    2016-05-01

    Full Text Available Due to the high nonlinearity of the three-dimensional (3-D unsaturated-saturated water flow equation, using a fully 3-D numerical model is computationally expensive for large scale applications. A new unsaturated-saturated water flow model is developed in this paper based on the vertical/horizontal splitting (VHS concept to split the 3-D unsaturated-saturated Richards’ equation into a two-dimensional (2-D horizontal equation and a one-dimensional (1-D vertical equation. The horizontal plane of average head gradient in the triangular prism element is derived to split the 3-D equation into the 2-D equation. The lateral flow in the horizontal plane of average head gradient represented by the 2-D equation is then calculated by the water balance method. The 1-D vertical equation is discretized by the finite difference method. The two equations are solved simultaneously by coupling them into a unified nonlinear system with a single matrix. Three synthetic cases are used to evaluate the developed model code by comparing the modeling results with those of Hydrus1D, SWMS2D and FEFLOW. We further apply the model to regional-scale modeling to simulate groundwater table fluctuations for assessing the model applicability in complex conditions. The proposed modeling method is found to be accurate with respect to measurements.

  7. Three-dimensional hydrogeologic framework model of the Rio Grande transboundary region of New Mexico and Texas, USA, and northern Chihuahua, Mexico

    Science.gov (United States)

    Sweetkind, Donald S.

    2017-09-08

    As part of a U.S. Geological Survey study in cooperation with the Bureau of Reclamation, a digital three-dimensional hydrogeologic framework model was constructed for the Rio Grande transboundary region of New Mexico and Texas, USA, and northern Chihuahua, Mexico. This model was constructed to define the aquifer system geometry and subsurface lithologic characteristics and distribution for use in a regional numerical hydrologic model. The model includes five hydrostratigraphic units: river channel alluvium, three informal subdivisions of Santa Fe Group basin fill, and an undivided pre-Santa Fe Group bedrock unit. Model input data were compiled from published cross sections, well data, structure contour maps, selected geophysical data, and contiguous compilations of surficial geology and structural features in the study area. These data were used to construct faulted surfaces that represent the upper and lower subsurface hydrostratigraphic unit boundaries. The digital three-dimensional hydrogeologic framework model is constructed through combining faults, the elevation of the tops of each hydrostratigraphic unit, and boundary lines depicting the subsurface extent of each hydrostratigraphic unit. The framework also compiles a digital representation of the distribution of sedimentary facies within each hydrostratigraphic unit. The digital three-dimensional hydrogeologic model reproduces with reasonable accuracy the previously published subsurface hydrogeologic conceptualization of the aquifer system and represents the large-scale geometry of the subsurface aquifers. The model is at a scale and resolution appropriate for use as the foundation for a numerical hydrologic model of the study area.

  8. Deformable three-dimensional model architecture for interactive augmented reality in minimally invasive surgery.

    Science.gov (United States)

    Vemuri, Anant S; Wu, Jungle Chi-Hsiang; Liu, Kai-Che; Wu, Hurng-Sheng

    2012-12-01

    Surgical procedures have undergone considerable advancement during the last few decades. More recently, the availability of some imaging methods intraoperatively has added a new dimension to minimally invasive techniques. Augmented reality in surgery has been a topic of intense interest and research. Augmented reality involves usage of computer vision algorithms on video from endoscopic cameras or cameras mounted in the operating room to provide the surgeon additional information that he or she otherwise would have to recognize intuitively. One of the techniques combines a virtual preoperative model of the patient with the endoscope camera using natural or artificial landmarks to provide an augmented reality view in the operating room. The authors' approach is to provide this with the least number of changes to the operating room. Software architecture is presented to provide interactive adjustment in the registration of a three-dimensional (3D) model and endoscope video. Augmented reality including adrenalectomy, ureteropelvic junction obstruction, and retrocaval ureter and pancreas was used to perform 12 surgeries. The general feedback from the surgeons has been very positive not only in terms of deciding the positions for inserting points but also in knowing the least change in anatomy. The approach involves providing a deformable 3D model architecture and its application to the operating room. A 3D model with a deformable structure is needed to show the shape change of soft tissue during the surgery. The software architecture to provide interactive adjustment in registration of the 3D model and endoscope video with adjustability of every 3D model is presented.

  9. Modeling Vehicle Collision Angle in Traffic Crashes Based on Three-Dimensional Laser Scanning Data

    Directory of Open Access Journals (Sweden)

    Nengchao Lyu

    2017-02-01

    Full Text Available In road traffic accidents, the analysis of a vehicle’s collision angle plays a key role in identifying a traffic accident’s form and cause. However, because accurate estimation of vehicle collision angle involves many factors, it is difficult to accurately determine it in cases in which less physical evidence is available and there is a lack of monitoring. This paper establishes the mathematical relation model between collision angle, deformation, and normal vector in the collision region according to the equations of particle deformation and force in Hooke’s law of classical mechanics. At the same time, the surface reconstruction method suitable for a normal vector solution is studied. Finally, the estimation model of vehicle collision angle is presented. In order to verify the correctness of the model, verification of multi-angle collision experiments and sensitivity analysis of laser scanning precision for the angle have been carried out using three-dimensional (3D data obtained by a 3D laser scanner in the collision deformation zone. Under the conditions with which the model has been defined, validation results show that the collision angle is a result of the weighted synthesis of the normal vector of the collision point and the weight value is the deformation of the collision point corresponding to normal vectors. These conclusions prove the applicability of the model. The collision angle model proposed in this paper can be used as the theoretical basis for traffic accident identification and cause analysis. It can also be used as a theoretical reference for the study of the impact deformation of elastic materials.

  10. Modelling stratospheric chemistry in a global three-dimensional chemical transport model

    Energy Technology Data Exchange (ETDEWEB)

    Rummukainen, M [Finnish Meteorological Inst., Sodankylae (Finland). Sodankylae Observatory

    1996-12-31

    Numerical modelling of atmospheric chemistry aims to increase the understanding of the characteristics, the behavior and the evolution of atmospheric composition. These topics are of utmost importance in the study of climate change. The multitude of gases and particulates making up the atmosphere and the complicated interactions between them affect radiation transfer, atmospheric dynamics, and the impacts of anthropogenic and natural emissions. Chemical processes are fundamental factors in global warming, ozone depletion and atmospheric pollution problems in general. Much of the prevailing work on modelling stratospheric chemistry has so far been done with 1- and 2-dimensional models. Carrying an extensive chemistry parameterisation in a model with high spatial and temporal resolution is computationally heavy. Today, computers are becoming powerful enough to allow going over to 3-dimensional models. In order to concentrate on the chemistry, many Chemical Transport Models (CTM) are still run off-line, i.e. with precalculated and archived meteorology and radiation. In chemistry simulations, the archived values drive the model forward in time, without interacting with the chemical evolution. This is an approach that has been adopted in stratospheric chemistry modelling studies at the Finnish Meteorological Institute. In collaboration with the University of Oslo, a development project was initiated in 1993 to prepare a stratospheric chemistry parameterisation, fit for global 3-dimensional modelling. This article presents the parameterisation approach. Selected results are shown from basic photochemical simulations

  11. Modelling stratospheric chemistry in a global three-dimensional chemical transport model

    Energy Technology Data Exchange (ETDEWEB)

    Rummukainen, M. [Finnish Meteorological Inst., Sodankylae (Finland). Sodankylae Observatory

    1995-12-31

    Numerical modelling of atmospheric chemistry aims to increase the understanding of the characteristics, the behavior and the evolution of atmospheric composition. These topics are of utmost importance in the study of climate change. The multitude of gases and particulates making up the atmosphere and the complicated interactions between them affect radiation transfer, atmospheric dynamics, and the impacts of anthropogenic and natural emissions. Chemical processes are fundamental factors in global warming, ozone depletion and atmospheric pollution problems in general. Much of the prevailing work on modelling stratospheric chemistry has so far been done with 1- and 2-dimensional models. Carrying an extensive chemistry parameterisation in a model with high spatial and temporal resolution is computationally heavy. Today, computers are becoming powerful enough to allow going over to 3-dimensional models. In order to concentrate on the chemistry, many Chemical Transport Models (CTM) are still run off-line, i.e. with precalculated and archived meteorology and radiation. In chemistry simulations, the archived values drive the model forward in time, without interacting with the chemical evolution. This is an approach that has been adopted in stratospheric chemistry modelling studies at the Finnish Meteorological Institute. In collaboration with the University of Oslo, a development project was initiated in 1993 to prepare a stratospheric chemistry parameterisation, fit for global 3-dimensional modelling. This article presents the parameterisation approach. Selected results are shown from basic photochemical simulations

  12. Three dimensional computed tomography lung modeling is useful in simulation and navigation of lung cancer surgery.

    Science.gov (United States)

    Ikeda, Norihiko; Yoshimura, Akinobu; Hagiwara, Masaru; Akata, Soichi; Saji, Hisashi

    2013-01-01

    The number of minimally invasive operations, such as video-assisted thoracoscopic surgery (VATS) lobectomy or segmentectomy, has enormously increased in recent years. These operations require extreme knowledge of the anatomy of pulmonary vessels and bronchi in each patient, and surgeons must carefully dissect the branches of pulmonary vessels during operation. Thus, foreknowledge of the anatomy of each patient would greatly contribute to the safety and accuracy of the operation. The development of multi-detector computed tomography (MDCT) has promoted three dimensional (3D) images of lung structures. It is possible to see the vascular and bronchial structures from the view of the operator; therefore, it is employed for preoperative simulation as well as navigation during operation. Due to advances in software, even small vessels can be accurately imaged, which is useful in performing segmentectomy. Surgical simulation and navigation systems based on high quality 3D lung modeling, including vascular and bronchial structures, can be used routinely to enhance the safety operation, education of junior staff, as well as providing a greater sense of security to the operators.

  13. Three-Dimensional Finite Element Modeling of Thermomechanical Problems in Functionally Graded Hydroxyapatite/Titanium Plate

    Directory of Open Access Journals (Sweden)

    S. N. S. Jamaludin

    2014-01-01

    Full Text Available The composition of hydroxyapatite (HA as the ceramic phase and titanium (Ti as the metallic phase in HA/Ti functionally graded materials (FGMs shows an excellent combination of high biocompatibility and high mechanical properties in a structure. Because the gradation of these properties is one of the factors that affects the response of the functionally graded (FG plates, this paper is presented to show the domination of the grading parameter on the displacement and stress distribution of the plates. A three-dimensional (3D thermomechanical model of a 20-node brick quadratic element is used in the simulation of the thermoelastic behaviors of HA/Ti FG plates subjected to constant and functional thermal, mechanical, and thermomechanical loadings. The convergence properties of the present results are examined thoroughly in order to assess the accuracy of the theory applied and to compare them with the established research results. Instead of the grading parameter, this study reveals that the loading field distribution can be another factor that reflects the thermoelastic properties of the HA/Ti FG plates. The FG structure is found to be able to withstand the thermal stresses while preserving the high toughness properties and thus shows its ability to operate at high temperature.

  14. Three-Dimensional (3D Printing of Polymer-Metal Hybrid Materials by Fused Deposition Modeling

    Directory of Open Access Journals (Sweden)

    Susanna Fafenrot

    2017-10-01

    Full Text Available Fused deposition modeling (FDM is a three-dimensional (3D printing technology that is usually performed with polymers that are molten in a printer nozzle and placed line by line on the printing bed or the previous layer, respectively. Nowadays, hybrid materials combining polymers with functional materials are also commercially available. Especially combinations of polymers with metal particles result in printed objects with interesting optical and mechanical properties. The mechanical properties of objects printed with two of these metal-polymer blends were compared to common poly (lactide acid (PLA printed objects. Tensile tests and bending tests show that hybrid materials mostly containing bronze have significantly reduced mechanical properties. Tensile strengths of the 3D-printed objects were unexpectedly nearly identical with those of the original filaments, indicating sufficient quality of the printing process. Our investigations show that while FDM printing allows for producing objects with mechanical properties similar to the original materials, metal-polymer blends cannot be used for the rapid manufacturing of objects necessitating mechanical strength.

  15. Three-Dimensional (3D) Printing of Polymer-Metal Hybrid Materials by Fused Deposition Modeling.

    Science.gov (United States)

    Fafenrot, Susanna; Grimmelsmann, Nils; Wortmann, Martin; Ehrmann, Andrea

    2017-10-19

    Fused deposition modeling (FDM) is a three-dimensional (3D) printing technology that is usually performed with polymers that are molten in a printer nozzle and placed line by line on the printing bed or the previous layer, respectively. Nowadays, hybrid materials combining polymers with functional materials are also commercially available. Especially combinations of polymers with metal particles result in printed objects with interesting optical and mechanical properties. The mechanical properties of objects printed with two of these metal-polymer blends were compared to common poly (lactide acid) (PLA) printed objects. Tensile tests and bending tests show that hybrid materials mostly containing bronze have significantly reduced mechanical properties. Tensile strengths of the 3D-printed objects were unexpectedly nearly identical with those of the original filaments, indicating sufficient quality of the printing process. Our investigations show that while FDM printing allows for producing objects with mechanical properties similar to the original materials, metal-polymer blends cannot be used for the rapid manufacturing of objects necessitating mechanical strength.

  16. Application of three dimensional finite element modeling for the simulation of machining processes

    International Nuclear Information System (INIS)

    Fischer, C.E.; Wu, W.T.; Chigurupati, P.; Jinn, J.T.

    2004-01-01

    For many years, metal cutting simulations have been performed using two dimensional approximations of the actual process. Factors such as chip morphology, cutting force, temperature, and tool wear can all be predicted on the computer. However, two dimensional simulation is limited to processes which are orthogonal, or which can be closely approximated as orthogonal.Advances in finite element technology, coupled with continuing improvement in the availability of low cost, high performance computer hardware, have made the three dimensional simulation of a large variety of metal cutting processes practical. Specific improvements include efficient FEM solvers, and robust adaptive remeshing. As researchers continue to gain an improved understanding of wear, material representation, tool coatings, fracture, and other such phenomena, the machining simulation system also must adapt to incorporate these evolving models.To demonstrate the capabilities of the 3D simulation system, a variety of drilling, milling, and turning processes have been simulated and will be presented in this paper. Issues related to computation time and simulation accuracy will also be addressed

  17. Three-dimensional finite element model for flexible pavement analyses based field modulus measurements

    International Nuclear Information System (INIS)

    Lacey, G.; Thenoux, G.; Rodriguez-Roa, F.

    2008-01-01

    In accordance with the present development of empirical-mechanistic tools, this paper presents an alternative to traditional analysis methods for flexible pavements using a three-dimensional finite element formulation based on a liner-elastic perfectly-plastic Drucker-Pager model for granular soil layers and a linear-elastic stress-strain law for the asphalt layer. From the sensitivity analysis performed, it was found that variations of +-4 degree in the internal friction angle of granular soil layers did not significantly affect the analyzed pavement response. On the other hand, a null dilation angle is conservatively proposed for design purposes. The use of a Light Falling Weight Deflectometer is also proposed as an effective and practical tool for on-site elastic modulus determination of granular soil layers. However, the stiffness value obtained from the tested layer should be corrected when the measured peak deflection and the peak force do not occur at the same time. In addition, some practical observations are given to achieve successful field measurements. The importance of using a 3D FE analysis to predict the maximum tensile strain at the bottom of the asphalt layer (related to pavement fatigue) and the maximum vertical comprehensive strain transmitted to the top of the granular soil layers (related to rutting) is also shown. (author)

  18. Three-dimensional model of corotating streams in the solar wind 3. Magnetohydrodynamic streams

    International Nuclear Information System (INIS)

    Pizzo, V.J.

    1982-01-01

    The focus of this paper is two-fold: (1) to examine how the presence of the spiral magnetic field affects the evolution of interplanetary corotating solar wind streams, and (2) to ascertain the nature of secondary large-scale phenomena likely to be associated with streams having a pronounced three-dimensional (3-D) structure. The dynamics are presumed to be governed by the nonlinear polytropic, single-fluid, 3-D MHD equations. Solutions are obtained with an explicit, Eulerian, finite differences technique that makes use of a simple form of artificial diffusion for handling shocks. For smooth axisymmetric flows, the picture of magnetically induced meridional motions previously established by linear models requires only minor correction. In the case of broad 3-D streams input near the sun, inclusion of the magnetic field is found to retard the kinematic steepening at the stream front substantially but to produce little deviation from planar flow. For the more realistic case of initially sharply bounded streams, however, it becomes essential to account for magnetic effects in the formulation. Whether a full 3-D treatment is required depends upon the latitudinal geometry of the stream

  19. Three-dimensional wave-induced current model equations and radiation stresses

    Science.gov (United States)

    Xia, Hua-yong

    2017-08-01

    After the approach by Mellor (2003, 2008), the present paper reports on a repeated effort to derive the equations for three-dimensional wave-induced current. Via the vertical momentum equation and a proper coordinate transformation, the phase-averaged wave dynamic pressure is well treated, and a continuous and depth-dependent radiation stress tensor, rather than the controversial delta Dirac function at the surface shown in Mellor (2008), is provided. Besides, a phase-averaged vertical momentum flux over a sloping bottom is introduced. All the inconsistencies in Mellor (2003, 2008), pointed out by Ardhuin et al. (2008) and Bennis and Ardhuin (2011), are overcome in the presently revised equations. In a test case with a sloping sea bed, as shown in Ardhuin et al. (2008), the wave-driving forces derived in the present equations are in good balance, and no spurious vertical circulation occurs outside the surf zone, indicating that Airy's wave theory and the approach of Mellor (2003, 2008) are applicable for the derivation of the wave-induced current model.

  20. BioSig3D: High Content Screening of Three-Dimensional Cell Culture Models.

    Directory of Open Access Journals (Sweden)

    Cemal Cagatay Bilgin

    Full Text Available BioSig3D is a computational platform for high-content screening of three-dimensional (3D cell culture models that are imaged in full 3D volume. It provides an end-to-end solution for designing high content screening assays, based on colony organization that is derived from segmentation of nuclei in each colony. BioSig3D also enables visualization of raw and processed 3D volumetric data for quality control, and integrates advanced bioinformatics analysis. The system consists of multiple computational and annotation modules that are coupled together with a strong use of controlled vocabularies to reduce ambiguities between different users. It is a web-based system that allows users to: design an experiment by defining experimental variables, upload a large set of volumetric images into the system, analyze and visualize the dataset, and either display computed indices as a heatmap, or phenotypic subtypes for heterogeneity analysis, or download computed indices for statistical analysis or integrative biology. BioSig3D has been used to profile baseline colony formations with two experiments: (i morphogenesis of a panel of human mammary epithelial cell lines (HMEC, and (ii heterogeneity in colony formation using an immortalized non-transformed cell line. These experiments reveal intrinsic growth properties of well-characterized cell lines that are routinely used for biological studies. BioSig3D is being released with seed datasets and video-based documentation.

  1. Three Dimensional Dynamic Model Based Wind Field Reconstruction from Lidar Data

    International Nuclear Information System (INIS)

    Raach, Steffen; Schlipf, David; Haizmann, Florian; Cheng, Po Wen

    2014-01-01

    Using the inflowing horizontal and vertical wind shears for individual pitch controller is a promising method if blade bending measurements are not available. Due to the limited information provided by a lidar system the reconstruction of shears in real-time is a challenging task especially for the horizontal shear in the presence of changing wind direction. The internal model principle has shown to be a promising approach to estimate the shears and directions in 10 minutes averages with real measurement data. The static model based wind vector field reconstruction is extended in this work taking into account a dynamic reconstruction model based on Taylor's Frozen Turbulence Hypothesis. The presented method provides time series over several seconds of the wind speed, shears and direction, which can be directly used in advanced optimal preview control. Therefore, this work is an important step towards the application of preview individual blade pitch control under realistic wind conditions. The method is tested using a turbulent wind field and a detailed lidar simulator. For the simulation, the turbulent wind field structure is flowing towards the lidar system and is continuously misaligned with respect to the horizontal axis of the wind turbine. Taylor's Frozen Turbulence Hypothesis is taken into account to model the wind evolution. For the reconstruction, the structure is discretized into several stages where each stage is reduced to an effective wind speed, superposed with a linear horizontal and vertical wind shear. Previous lidar measurements are shifted using again Taylor's Hypothesis. The wind field reconstruction problem is then formulated as a nonlinear optimization problem, which minimizes the residual between the assumed wind model and the lidar measurements to obtain the misalignment angle and the effective wind speed and the wind shears for each stage. This method shows good results in reconstructing the wind characteristics of a three

  2. IPRT polarized radiative transfer model intercomparison project - Three-dimensional test cases (phase B)

    Science.gov (United States)

    Emde, Claudia; Barlakas, Vasileios; Cornet, Céline; Evans, Frank; Wang, Zhen; Labonotte, Laurent C.; Macke, Andreas; Mayer, Bernhard; Wendisch, Manfred

    2018-04-01

    Initially unpolarized solar radiation becomes polarized by scattering in the Earth's atmosphere. In particular molecular scattering (Rayleigh scattering) polarizes electromagnetic radiation, but also scattering of radiation at aerosols, cloud droplets (Mie scattering) and ice crystals polarizes. Each atmospheric constituent produces a characteristic polarization signal, thus spectro-polarimetric measurements are frequently employed for remote sensing of aerosol and cloud properties. Retrieval algorithms require efficient radiative transfer models. Usually, these apply the plane-parallel approximation (PPA), assuming that the atmosphere consists of horizontally homogeneous layers. This allows to solve the vector radiative transfer equation (VRTE) efficiently. For remote sensing applications, the radiance is considered constant over the instantaneous field-of-view of the instrument and each sensor element is treated independently in plane-parallel approximation, neglecting horizontal radiation transport between adjacent pixels (Independent Pixel Approximation, IPA). In order to estimate the errors due to the IPA approximation, three-dimensional (3D) vector radiative transfer models are required. So far, only a few such models exist. Therefore, the International Polarized Radiative Transfer (IPRT) working group of the International Radiation Commission (IRC) has initiated a model intercomparison project in order to provide benchmark results for polarized radiative transfer. The group has already performed an intercomparison for one-dimensional (1D) multi-layer test cases [phase A, 1]. This paper presents the continuation of the intercomparison project (phase B) for 2D and 3D test cases: a step cloud, a cubic cloud, and a more realistic scenario including a 3D cloud field generated by a Large Eddy Simulation (LES) model and typical background aerosols. The commonly established benchmark results for 3D polarized radiative transfer are available at the IPRT website (http

  3. Three-dimensional Kinetic Pulsar Magnetosphere Models: Connecting to Gamma-Ray Observations

    Science.gov (United States)

    Kalapotharakos, Constantinos; Brambilla, Gabriele; Timokhin, Andrey; Harding, Alice K.; Kazanas, Demosthenes

    2018-04-01

    We present three-dimensional (3D) global kinetic pulsar magnetosphere models, where the charged particle trajectories and the corresponding electromagnetic fields are treated self-consistently. For our study, we have developed a Cartesian 3D relativistic particle-in-cell code that incorporates radiation reaction forces. We describe our code and discuss the related technical issues, treatments, and assumptions. Injecting particles up to large distances in the magnetosphere, we apply arbitrarily low to high particle injection rates, and obtain an entire spectrum of solutions from close to the vacuum-retarded dipole to close to the force-free (FF) solution, respectively. For high particle injection rates (close to FF solutions), significant accelerating electric field components are confined only near the equatorial current sheet outside the light cylinder. A judicious interpretation of our models allows the particle emission to be calculated, and consequently, the corresponding realistic high-energy sky maps and spectra to be derived. Using model parameters that cover the entire range of spin-down powers of Fermi young and millisecond pulsars, we compare the corresponding model γ-ray light curves, cutoff energies, and total γ-ray luminosities with those observed by Fermi to discover a dependence of the particle injection rate, { \\mathcal F }, on the spin-down power, \\dot{{ \\mathcal E }}, indicating an increase of { \\mathcal F } with \\dot{{ \\mathcal E }}. Our models, guided by Fermi observations, provide field structures and particle distributions that are not only consistent with each other but also able to reproduce a broad range of the observed γ-ray phenomenologies of both young and millisecond pulsars.

  4. Three-dimensional electrical resistivity model of a nuclear waste disposal site

    International Nuclear Information System (INIS)

    Rucker, Dale F.; Levitt, Marc T.; Greenwood, William J.

    2009-01-01

    A three-dimensional (3D) modeling study was completed on a very large electrical resistivity survey conducted at a nuclear waste site in eastern Washington. The acquisition included 47 pole-pole two dimensional (2D) resistivity profiles collected along parallel and orthogonal lines over an area of 850 m-570 m. The data were geo-referenced and inverted using EarthImager3D (EI3D). EI3D runs on a Microsoft 32-bit operating system (e.g. WIN-2K, XP) with a maximum usable memory of 2 GB. The memory limits the size of the domain for the inversion model to 200 m-200 m, based on the survey electrode density. Therefore, a series of increasing overlapping models were run to evaluate the effectiveness of dividing the survey area into smaller subdomains. The results of the smaller subdomains were compared to the inversion results of a single domain over a larger area using an upgraded form of EI3D that incorporates multi-processing capabilities and 32 GB of RAM memory. The contours from the smaller subdomains showed discontinuity at the boundaries between the adjacent models, which do not match the hydrogeologic expectations given the nature of disposal at the site. At several boundaries, the contours of the low resistivity areas close, leaving the appearance of disconnected plumes or open contours at boundaries are not met with a continuance of the low resistivity plume into the adjacent subdomain. The model results of the single large domain show a continuous monolithic plume within the central and western portion of the site, directly beneath the elongated trenches. It is recommended that where possible, the domain not be subdivided, but instead include as much of the domain as possible given the memory of available computing resources.

  5. Influence of Dzyaloshinskii-Moriya interaction and ballistic spin transport in the two and three-dimensional Heisenberg model

    Science.gov (United States)

    Lima, L. S.

    2018-06-01

    We study the effect of Dzyaloshisnkii-Moriya interaction on spin transport in the two and three-dimensional Heisenberg antiferromagnetic models in the square lattice and cubic lattice respectively. For the three-dimensional model, we obtain a large peak for the spin conductivity and therefore a finite AC conductivity. For the two-dimensional model, we have gotten the AC spin conductivity tending to the infinity at ω → 0 limit and a suave decreasing in the spin conductivity with increase of ω. We obtain a small influence of the Dzyaloshinskii-Moriya interaction on the spin conductivity in all cases analyzed.

  6. Evaluation of turbulence models for turbomachinery unsteady three-dimensional flows simulation; Evaluation de modeles de turbulence pour la simulation d'ecoulements tridimensionnels instationnaires en turbomachines

    Energy Technology Data Exchange (ETDEWEB)

    Dano, C.

    2003-01-15

    The objective of this thesis is to evaluate k-e, k-l and k-w low Reynolds two equation turbulence models for. A quadratic nonlinear k-l model is also implemented in this study. We analyze the two equation turbulence models capacity to predict the turbomachinery flows and the wakes. We are interested more particularly in the unsteady three dimensional configuration with rotor-stator interactions. A Gaussian distribution reproduces the upstream wake. This analysis is carried out in term of prediction quality but also in term of numerical behavior. Turbines and compressors configurations are tested. (author)

  7. Accuracy of open-source software segmentation and paper-based printed three-dimensional models.

    Science.gov (United States)

    Szymor, Piotr; Kozakiewicz, Marcin; Olszewski, Raphael

    2016-02-01

    In this study, we aimed to verify the accuracy of models created with the help of open-source Slicer 3.6.3 software (Surgical Planning Lab, Harvard Medical School, Harvard University, Boston, MA, USA) and the Mcor Matrix 300 paper-based 3D printer. Our study focused on the accuracy of recreating the walls of the right orbit of a cadaveric skull. Cone beam computed tomography (CBCT) of the skull was performed (0.25-mm pixel size, 0.5-mm slice thickness). Acquired DICOM data were imported into Slicer 3.6.3 software, where segmentation was performed. A virtual model was created and saved as an .STL file and imported into Netfabb Studio professional 4.9.5 software. Three different virtual models were created by cutting the original file along three different planes (coronal, sagittal, and axial). All models were printed with a Selective Deposition Lamination Technology Matrix 300 3D printer using 80 gsm A4 paper. The models were printed so that their cutting plane was parallel to the paper sheets creating the model. Each model (coronal, sagittal, and axial) consisted of three separate parts (∼200 sheets of paper each) that were glued together to form a final model. The skull and created models were scanned with a three-dimensional (3D) optical scanner (Breuckmann smart SCAN) and were saved as .STL files. Comparisons of the orbital walls of the skull, the virtual model, and each of the three paper models were carried out with GOM Inspect 7.5SR1 software. Deviations measured between the models analysed were presented in the form of a colour-labelled map and covered with an evenly distributed network of points automatically generated by the software. An average of 804.43 ± 19.39 points for each measurement was created. Differences measured in each point were exported as a .csv file. The results were statistically analysed using Statistica 10, with statistical significance set at p paper-based Mcor Matrix 300 3D printer is comparable to those of other commonly used

  8. Modellierung dreidimensionaler Strahlungsfelder im frühen Universum %t Modelling three dimensional radiation fields in the early universe

    Science.gov (United States)

    Meinköhn, Erik

    2002-11-01

    The present work aims at the modelling of three-dimensional radiation fields in gas clouds from the early universe, in particular as to the influence of varying distributions of density and velocity. In observations of high-redshift gas clouds, the Lyα transition from the first excited energy level to the ground state of the hydrogen atom is usually found to be the only prominent emission lines in the entire spectrum. It is a well-known assumption that high-redshifted hydrogen clouds are the precursors of present-day galaxies. Thus, the investigation of the Lyα line is of paramount importance of the theory of galaxy formation and evolution. The observed Lyα line - or rather, to be precise, its profile - reveals both the complexity of the spatial distribution and of the kinematics of the interstellar gas, and also the nature of the photon source. In this thesis we have developed a code which is capable of solving the three-dimensional frequency-dependent radiative transfer equation for arbitrarily nonrelativistically moving media. The numerical treatment of the associated partial integro-differential equation is an extremely challenging task, since radiation intensity depends on 6 variables, namely 3 space variables, 2 variables describing the direction of photon propagation, and the frequency. With the goal of a quantitative comparison with observational data in mind, the implementation of very efficient methods for a sufficiently accurate solution of the complex radiative transfer problems turned out to be a necessity. The size of the resulting linear system of equations makes the use of parallelization techniques and grid refinement strategies indispensable.

  9. SU-E-T-754: Three-Dimensional Patient Modeling Using Photogrammetry for Collision Avoidance

    Energy Technology Data Exchange (ETDEWEB)

    Popple, R; Cardan, R [Univ Alabama Birmingham, Birmingham, AL (United States)

    2015-06-15

    Purpose: To evaluate photogrammetry for creating a three-dimensional patient model. Methods: A mannequin was configured on the couch of a CT scanner to simulate a patient setup using an indexed positioning device. A CT fiducial was placed on the indexed CT table-overlay at the reference index position. Two dimensional photogrammetry targets were placed on the table in known positions. A digital SLR camera was used to obtain 27 images from different positions around the CT table. The images were imported into a commercial photogrammetry package and a 3D model constructed. Each photogrammetry target was identified on 2 to 5 images. The CT DICOM metadata and the position of the CT fiducial were used to calculate the coordinates of the photogrammetry targets in the CT image frame of reference. The coordinates were transferred to the photogrammetry software to orient the 3D model. The mannequin setup was transferred to the treatment couch of a linear accelerator and positioned at isocenter using in-room lasers. The treatment couch coordinates were noted and compared with prediction. The collision free regions were measured over the full range of gantry and table motion and were compared with predictions obtained using a general purpose polygon interference algorithm. Results: The reconstructed 3D model consisted of 180000 triangles. The difference between the predicted and measured couch positions were 5 mm, 1 mm, and 1 mm for longitudinal, lateral, and vertical, respectively. The collision prediction tested 64620 gantry table combinations in 11.1 seconds. The accuracy was 96.5%, with false positive and negative results occurring at the boundaries of the collision space. Conclusion: Photogrammetry can be used as a tool for collision avoidance during treatment planning. The results indicate that a buffer zone is necessary to avoid false negatives at the boundary of the collision-free zone. Testing with human patients is underway. Research partially supported by a grant

  10. Establishment of virtual three-dimensional model for intravascular interventional devices and its clinical value

    International Nuclear Information System (INIS)

    Wei Xin; Zhong Liming; Xie Xiaodong; Wang Chaohua; You Jian; Hu Hong; Hu Kongqiong; Zhao Xiaowei

    2012-01-01

    Objective: To explore virtual three-dimensional (3D) model for intravascular interventional devices,the method of preoperative simulation and its value in clinical work. Methods: The virtual models including catheter, guide wire, stent and coil were established by using the 3D moulding software of 3D Studio MAX R3. The interventional preoperative simulation was performed on personal computer including 21 patients of cerebral aneurysm embolization (anterior communicating artery 5, posterior communicating artery 10,middle cerebral artery 3, internal carotid artery 2, and vertebral artery 1), during interventional procedures, the surgeon relied on the simulation results for plastic micro-guide wire, catheter and the release of micro-coils and stents. Results: (1) All the virtual instruments and real instruments had similar shape,the overall tine for constructing virtual model was about 20 hours. The preoperative simulation took 50 to 80 minutes. (2) The simulation result of catheter insertion in the 18 cases had relevant value to guide micro-catheter, molding micro-guide wire tip, and shortened the operating time. For embolization, the simulation results of filling coil and releasing stent were similar to surgical results in 76% of the patients (16/21). (3)For teaching and training, 93% (38/41) of doctors in training believed that preoperative simulation facilitated the understanding of surgery. Conclusions: The method of virtual model of intravascular interventional devices was reliable. The preoperative simulation results could be used to guide practical clinical operation with relatively high degree of similarity, and could play a role in promoting researches on interventional virtual operations. (authors)

  11. Using three-dimensional plant root architecture in models of shallow-slope stability.

    Science.gov (United States)

    Danjon, Frédéric; Barker, David H; Drexhage, Michael; Stokes, Alexia

    2008-05-01

    The contribution of vegetation to shallow-slope stability is of major importance in landslide-prone regions. However, existing slope stability models use only limited plant root architectural parameters. This study aims to provide a chain of tools useful for determining the contribution of tree roots to soil reinforcement. Three-dimensional digitizing in situ was used to obtain accurate root system architecture data for mature Quercus alba in two forest stands. These data were used as input to tools developed, which analyse the spatial position of roots, topology and geometry. The contribution of roots to soil reinforcement was determined by calculating additional soil cohesion using the limit equilibrium model, and the factor of safety (FOS) using an existing slope stability model, Slip4Ex. Existing models may incorrectly estimate the additional soil cohesion provided by roots, as the spatial position of roots crossing the potential slip surface is usually not taken into account. However, most soil reinforcement by roots occurs close to the tree stem and is negligible at a distance >1.0 m from the tree, and therefore global values of FOS for a slope do not take into account local slippage along the slope. Within a forest stand on a landslide-prone slope, soil fixation by roots can be minimal between uniform rows of trees, leading to local soil slippage. Therefore, staggered rows of trees would improve overall slope stability, as trees would arrest the downward movement of soil. The chain of tools consisting of both software (free for non-commercial use) and functions available from the first author will enable a more accurate description and use of root architectural parameters in standard slope stability analyses.

  12. Verification of a three-dimensional resin transfer molding process simulation model

    Science.gov (United States)

    Fingerson, John C.; Loos, Alfred C.; Dexter, H. Benson

    1995-01-01

    Experimental evidence was obtained to complete the verification of the parameters needed for input to a three-dimensional finite element model simulating the resin flow and cure through an orthotropic fabric preform. The material characterizations completed include resin kinetics and viscosity models, as well as preform permeability and compaction models. The steady-state and advancing front permeability measurement methods are compared. The results indicate that both methods yield similar permeabilities for a plain weave, bi-axial fiberglass fabric. Also, a method to determine principal directions and permeabilities is discussed and results are shown for a multi-axial warp knit preform. The flow of resin through a blade-stiffened preform was modeled and experiments were completed to verify the results. The predicted inlet pressure was approximately 65% of the measured value. A parametric study was performed to explain differences in measured and predicted flow front advancement and inlet pressures. Furthermore, PR-500 epoxy resin/IM7 8HS carbon fabric flat panels were fabricated by the Resin Transfer Molding process. Tests were completed utilizing both perimeter injection and center-port injection as resin inlet boundary conditions. The mold was instrumented with FDEMS sensors, pressure transducers, and thermocouples to monitor the process conditions. Results include a comparison of predicted and measured inlet pressures and flow front position. For the perimeter injection case, the measured inlet pressure and flow front results compared well to the predicted results. The results of the center-port injection case showed that the predicted inlet pressure was approximately 50% of the measured inlet pressure. Also, measured flow front position data did not agree well with the predicted results. Possible reasons for error include fiber deformation at the resin inlet and a lag in FDEMS sensor wet-out due to low mold pressures.

  13. PHOTOMETRIC AND SPECTRAL SIGNATURES OF THREE-DIMENSIONAL MODELS OF TRANSITING GIANT EXOPLANETS

    International Nuclear Information System (INIS)

    Burrows, A.; Spiegel, D. S.; Rauscher, E.; Menou, K.

    2010-01-01

    Using a three-dimensional general circulation model, we create dynamical model atmospheres of a representative transiting giant exoplanet, HD 209458b. We post-process these atmospheres with an opacity code to obtain transit radius spectra during the primary transit. Using a spectral atmosphere code, we integrate over the face of the planet seen by an observer at various orbital phases and calculate light curves as a function of wavelength and for different photometric bands. The products of this study are generic predictions for the phase variations of a zero-eccentricity giant planet's transit spectrum and of its light curves. We find that for these models the temporal variations in all quantities and the ingress/egress contrasts in the transit radii are small (<1.0%). Moreover, we determine that the day/night contrasts and phase shifts of the brightness peaks relative to the ephemeris are functions of photometric band. The J, H, and K bands are shifted most, while the IRAC bands are shifted least. Therefore, we verify that the magnitude of the downwind shift in the planetary 'hot spot' due to equatorial winds is strongly wavelength dependent. The phase and wavelength dependence of light curves, as well as the associated day/night contrasts, can be used to constrain the circulation regime of irradiated giant planets and to probe different pressure levels of a hot Jupiter atmosphere. We posit that though our calculations focus on models of HD 209458b, similar calculations for other transiting hot Jupiters in low-eccentricity orbits should yield transit spectra and light curves of a similar character.

  14. Open wedge high tibial osteotomy using three-dimensional printed models: Experimental analysis using porcine bone.

    Science.gov (United States)

    Kwun, Jun-Dae; Kim, Hee-June; Park, Jaeyoung; Park, Il-Hyung; Kyung, Hee-Soo

    2017-01-01

    The purpose of this study was to evaluate the usefulness of three-dimensional (3D) printed models for open wedge high tibial osteotomy (HTO) in porcine bone. Computed tomography (CT) images were obtained from 10 porcine knees and 3D imaging was planned using the 3D-Slicer program. The osteotomy line was drawn from the three centimeters below the medial tibial plateau to the proximal end of the fibular head. Then the osteotomy gap was opened until the mechanical axis line was 62.5% from the medial border along the width of the tibial plateau, maintaining the posterior tibial slope angle. The wedge-shaped 3D-printed model was designed with the measured angle and osteotomy section and was produced by the 3D printer. The open wedge HTO surgery was reproduced in porcine bone using the 3D-printed model and the osteotomy site was fixed with a plate. Accuracy of osteotomy and posterior tibial slope was evaluated after the osteotomy. The mean mechanical axis line on the tibial plateau was 61.8±1.5% from the medial tibia. There was no statistically significant difference (P=0.160). The planned and post-osteotomy correction wedge angles were 11.5±3.2° and 11.4±3.3°, and the posterior tibial slope angle was 11.2±2.2° pre-osteotomy and 11.4±2.5° post-osteotomy. There were no significant differences (P=0.854 and P=0.429, respectively). This study showed that good results could be obtained in high tibial osteotomy by using 3D printed models of porcine legs. Copyright © 2016 Elsevier B.V. All rights reserved.

  15. Three-dimensional stochastic model of actin–myosin binding in the sarcomere lattice

    Energy Technology Data Exchange (ETDEWEB)

    Mijailovich, Srboljub M.; Kayser-Herold, Oliver; Stojanovic, Boban; Nedic, Djordje; Irving, Thomas C.; Geeves, MA (Harvard); (IIT); (U. Kent); (Kragujevac)

    2016-11-18

    The effect of molecule tethering in three-dimensional (3-D) space on bimolecular binding kinetics is rarely addressed and only occasionally incorporated into models of cell motility. The simplest system that can quantitatively determine this effect is the 3-D sarcomere lattice of the striated muscle, where tethered myosin in thick filaments can only bind to a relatively small number of available sites on the actin filament, positioned within a limited range of thermal movement of the myosin head. Here we implement spatially explicit actomyosin interactions into the multiscale Monte Carlo platform MUSICO, specifically defining how geometrical constraints on tethered myosins can modulate state transition rates in the actomyosin cycle. The simulations provide the distribution of myosin bound to sites on actin, ensure conservation of the number of interacting myosins and actin monomers, and most importantly, the departure in behavior of tethered myosin molecules from unconstrained myosin interactions with actin. In addition, MUSICO determines the number of cross-bridges in each actomyosin cycle state, the force and number of attached cross-bridges per myosin filament, the range of cross-bridge forces and accounts for energy consumption. At the macroscopic scale, MUSICO simulations show large differences in predicted force-velocity curves and in the response during early force recovery phase after a step change in length comparing to the two simplest mass action kinetic models. The origin of these differences is rooted in the different fluxes of myosin binding and corresponding instantaneous cross-bridge distributions and quantitatively reflects a major flaw of the mathematical description in all mass action kinetic models. Consequently, this new approach shows that accurate recapitulation of experimental data requires significantly different binding rates, number of actomyosin states, and cross-bridge elasticity than typically used in mass action kinetic models to

  16. Behavior and Three-Dimensional Finite Element Modeling of Circular Concrete Columns Partially Wrapped with FRP Strips

    Directory of Open Access Journals (Sweden)

    Junjie Zeng

    2018-03-01

    Full Text Available Fiber-reinforced polymer (FRP jacketing/wrapping has become an attractive strengthening technique for concrete columns. Wrapping an existing concrete column with continuous FRP jackets with the fiber in the jacket being oriented in the hoop direction is referred to as FRP full wrapping strengthening technique. In practice, however, strengthening concrete columns with vertically discontinuous FRP strips is also favored and this technique is referred to as FRP partial wrapping strengthening technique. Existing research has demonstrated that FRP partial wrapping strengthening technique is a promising and economical alternative to the FRP full wrapping strengthening technique. Although extensive experimental investigations have hitherto been conducted on partially FRP-confined concrete columns, the confinement mechanics of confined concrete in partially FRP-confined circular columns remains unclear. In this paper, an experimental program consisting of fifteen column specimens was conducted and the test results were presented. A reliable three-dimensional (3D finite element (FE approach for modeling of partially FRP-confined circular columns was established. In the proposed FE approach, an accurate plastic-damage model for concrete under multiaxial compression is employed. The accuracy of the proposed FE approach was verified by comparisons between the numerical results and the test results. Numerical results from the verified FE approach were then presented to gain an improved understanding of the behavior of confined concrete in partially FRP-confined concrete columns.

  17. Three dimensional wavefield modeling using the pseudospectral method; Pseudospectral ho ni yoru sanjigen hadoba modeling

    Energy Technology Data Exchange (ETDEWEB)

    Sato, T; Matsuoka, T [Japan Petroleum Exploration Corp., Tokyo (Japan); Saeki, T [Japan National Oil Corp., Tokyo (Japan). Technology Research Center

    1997-05-27

    Discussed in this report is a wavefield simulation in the 3-dimensional seismic survey. With the level of the object of exploration growing deeper and the object more complicated in structure, the survey method is now turning 3-dimensional. There are several modelling methods for numerical calculation of 3-dimensional wavefields, such as the difference method, pseudospectral method, and the like, all of which demand an exorbitantly large memory and long calculation time, and are costly. Such methods have of late become feasible, however, thanks to the advent of the parallel computer. As compared with the difference method, the pseudospectral method requires a smaller computer memory and shorter computation time, and is more flexible in accepting models. It outputs the result in fullwave just like the difference method, and does not cause wavefield numerical variance. As the computation platform, the parallel computer nCUBE-2S is used. The object domain is divided into the number of the processors, and each of the processors takes care only of its share so that parallel computation as a whole may realize a very high-speed computation. By the use of the pseudospectral method, a 3-dimensional simulation is completed within a tolerable computation time length. 7 refs., 3 figs., 1 tab.

  18. Visualizing Three-dimensional Slab Geometries with ShowEarthModel

    Science.gov (United States)

    Chang, B.; Jadamec, M. A.; Fischer, K. M.; Kreylos, O.; Yikilmaz, M. B.

    2017-12-01

    Seismic data that characterize the morphology of modern subducted slabs on Earth suggest that a two-dimensional paradigm is no longer adequate to describe the subduction process. Here we demonstrate the effect of data exploration of three-dimensional (3D) global slab geometries with the open source program ShowEarthModel. ShowEarthModel was designed specifically to support data exploration, by focusing on interactivity and real-time response using the Vrui toolkit. Sixteen movies are presented that explore the 3D complexity of modern subduction zones on Earth. The first movie provides a guided tour through the Earth's major subduction zones, comparing the global slab geometry data sets of Gudmundsson and Sambridge (1998), Syracuse and Abers (2006), and Hayes et al. (2012). Fifteen regional movies explore the individual subduction zones and regions intersecting slabs, using the Hayes et al. (2012) slab geometry models where available and the Engdahl and Villasenor (2002) global earthquake data set. Viewing the subduction zones in this way provides an improved conceptualization of the 3D morphology within a given subduction zone as well as the 3D spatial relations between the intersecting slabs. This approach provides a powerful tool for rendering earth properties and broadening capabilities in both Earth Science research and education by allowing for whole earth visualization. The 3D characterization of global slab geometries is placed in the context of 3D slab-driven mantle flow and observations of shear wave splitting in subduction zones. These visualizations contribute to the paradigm shift from a 2D to 3D subduction framework by facilitating the conceptualization of the modern subduction system on Earth in 3D space.

  19. Monitoring Prostate Tumor Growth in an Orthotopic Mouse Model Using Three-Dimensional Ultrasound Imaging Technique

    Directory of Open Access Journals (Sweden)

    Jie Ni

    2016-02-01

    Full Text Available Prostate cancer (CaP is the most commonly diagnosed and the second leading cause of death from cancer in males in USA. Prostate orthotopic mouse model has been widely used to study human CaP in preclinical settings. Measurement of changes in tumor size obtained from noninvasive diagnostic images is a standard method for monitoring responses to anticancer modalities. This article reports for the first time the usage of a three-dimensional (3D ultrasound system equipped with photoacoustic (PA imaging in monitoring longitudinal prostate tumor growth in a PC-3 orthotopic NODSCID mouse model (n = 8. Two-dimensional and 3D modes of ultrasound show great ability in accurately depicting the size and shape of prostate tumors. PA function on two-dimensional and 3D images showed average oxygen saturation and average hemoglobin concentration of the tumor. Results showed a good fit in representative exponential tumor growth curves (n = 3; r2 = 0.948, 0.955, and 0.953, respectively and a good correlation of tumor volume measurements performed in vivo with autopsy (n = 8, r = 0.95, P < .001. The application of 3D ultrasound imaging proved to be a useful imaging modality in monitoring tumor growth in an orthotopic mouse model, with advantages such as high contrast, uncomplicated protocols, economical equipment, and nonharmfulness to animals. PA mode also enabled display of blood oxygenation surrounding the tumor and tumor vasculature and angiogenesis, making 3D ultrasound imaging an ideal tool for preclinical cancer research.

  20. Numerical simulation of vapor film collapse behavior on high-temperature droplet surface with three-dimensional lattice gas cellular automata

    International Nuclear Information System (INIS)

    Tochio, Daisuke; Abe, Yutaka; Matsukuma, Yosuke

    2008-01-01

    It is pointed out that a vapor film on a premixed high-temperature droplet surface is needed to be collapsed to trigger vapor explosion. Thus, it is important to clarify the micromechanism of vapor film collapse behavior for the occurrence of vapor explosion. In a previous study, it is suggested experimentally that vapor film collapse behavior is dominated by phase change phenomena rather than by the surrounding fluid motion. In the present study, vapor film collapse behavior is investigated to clarify the dominant factor of vapor film collapse behavior with lattice gas automata of three-dimensional immiscible lattice gas model (3-D ILG model). First, in order to represent the boiling and phase change phenomena, the thermal model of a heat wall model and a phase change model is newly constructed. Next, the numerical simulation of vapor film collapse behavior is performed with and without the phase change effect. As a result, the computational result with the phase change effect is observed to be almost same as the experimental result. It can be considered that vapor film collapse behavior is dominated by phase change phenomena. (author)

  1. Three-dimensional hydrogel cell culture systems for modeling neural tissue

    Science.gov (United States)

    Frampton, John

    Two-dimensional (2-D) neural cell culture systems have served as physiological models for understanding the cellular and molecular events that underlie responses to physical and chemical stimuli, control sensory and motor function, and lead to the development of neurological diseases. However, the development of three-dimensional (3-D) cell culture systems will be essential for the advancement of experimental research in a variety of fields including tissue engineering, chemical transport and delivery, cell growth, and cell-cell communication. In 3-D cell culture, cells are provided with an environment similar to tissue, in which they are surrounded on all sides by other cells, structural molecules and adhesion ligands. Cells grown in 3-D culture systems display morphologies and functions more similar to those observed in vivo, and can be cultured in such a way as to recapitulate the structural organization and biological properties of tissue. This thesis describes a hydrogel-based culture system, capable of supporting the growth and function of several neural cell types in 3-D. Alginate hydrogels were characterized in terms of their biomechanical and biochemical properties and were functionalized by covalent attachment of whole proteins and peptide epitopes. Methods were developed for rapid cross-linking of alginate hydrogels, thus permitting the incorporation of cells into 3-D scaffolds without adversely affecting cell viability or function. A variety of neural cell types were tested including astrocytes, microglia, and neurons. Cells remained viable and functional for longer than two weeks in culture and displayed process outgrowth in 3-D. Cell constructs were created that varied in cell density, type and organization, providing experimental flexibility for studying cell interactions and behavior. In one set of experiments, 3-D glial-endothelial cell co-cultures were used to model blood-brain barrier (BBB) structure and function. This co-culture system was

  2. A computational model to generate simulated three-dimensional breast masses

    Energy Technology Data Exchange (ETDEWEB)

    Sisternes, Luis de; Brankov, Jovan G.; Zysk, Adam M.; Wernick, Miles N., E-mail: wernick@iit.edu [Medical Imaging Research Center, Department of Electrical and Computer Engineering, Illinois Institute of Technology, Chicago, Illinois 60616 (United States); Schmidt, Robert A. [Kurt Rossmann Laboratories for Radiologic Image Research, Department of Radiology, The University of Chicago, Chicago, Illinois 60637 (United States); Nishikawa, Robert M. [Department of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania 15213 (United States)

    2015-02-15

    Purpose: To develop algorithms for creating realistic three-dimensional (3D) simulated breast masses and embedding them within actual clinical mammograms. The proposed techniques yield high-resolution simulated breast masses having randomized shapes, with user-defined mass type, size, location, and shape characteristics. Methods: The authors describe a method of producing 3D digital simulations of breast masses and a technique for embedding these simulated masses within actual digitized mammograms. Simulated 3D breast masses were generated by using a modified stochastic Gaussian random sphere model to generate a central tumor mass, and an iterative fractal branching algorithm to add complex spicule structures. The simulated masses were embedded within actual digitized mammograms. The authors evaluated the realism of the resulting hybrid phantoms by generating corresponding left- and right-breast image pairs, consisting of one breast image containing a real mass, and the opposite breast image of the same patient containing a similar simulated mass. The authors then used computer-aided diagnosis (CAD) methods and expert radiologist readers to determine whether significant differences can be observed between the real and hybrid images. Results: The authors found no statistically significant difference between the CAD features obtained from the real and simulated images of masses with either spiculated or nonspiculated margins. Likewise, the authors found that expert human readers performed very poorly in discriminating their hybrid images from real mammograms. Conclusions: The authors’ proposed method permits the realistic simulation of 3D breast masses having user-defined characteristics, enabling the creation of a large set of hybrid breast images containing a well-characterized mass, embedded within real breast background. The computational nature of the model makes it suitable for detectability studies, evaluation of computer aided diagnosis algorithms, and

  3. A computational model to generate simulated three-dimensional breast masses

    International Nuclear Information System (INIS)

    Sisternes, Luis de; Brankov, Jovan G.; Zysk, Adam M.; Wernick, Miles N.; Schmidt, Robert A.; Nishikawa, Robert M.

    2015-01-01

    Purpose: To develop algorithms for creating realistic three-dimensional (3D) simulated breast masses and embedding them within actual clinical mammograms. The proposed techniques yield high-resolution simulated breast masses having randomized shapes, with user-defined mass type, size, location, and shape characteristics. Methods: The authors describe a method of producing 3D digital simulations of breast masses and a technique for embedding these simulated masses within actual digitized mammograms. Simulated 3D breast masses were generated by using a modified stochastic Gaussian random sphere model to generate a central tumor mass, and an iterative fractal branching algorithm to add complex spicule structures. The simulated masses were embedded within actual digitized mammograms. The authors evaluated the realism of the resulting hybrid phantoms by generating corresponding left- and right-breast image pairs, consisting of one breast image containing a real mass, and the opposite breast image of the same patient containing a similar simulated mass. The authors then used computer-aided diagnosis (CAD) methods and expert radiologist readers to determine whether significant differences can be observed between the real and hybrid images. Results: The authors found no statistically significant difference between the CAD features obtained from the real and simulated images of masses with either spiculated or nonspiculated margins. Likewise, the authors found that expert human readers performed very poorly in discriminating their hybrid images from real mammograms. Conclusions: The authors’ proposed method permits the realistic simulation of 3D breast masses having user-defined characteristics, enabling the creation of a large set of hybrid breast images containing a well-characterized mass, embedded within real breast background. The computational nature of the model makes it suitable for detectability studies, evaluation of computer aided diagnosis algorithms, and

  4. A model of Stokesian peristalsis and vesicle transport in a three-dimensional closed cavity.

    Science.gov (United States)

    Aranda, Vivian; Cortez, Ricardo; Fauci, Lisa

    2015-06-25

    The complexity of the mechanics involved in the mammalian reproductive process is evident. Neither an ovum nor an embryo is self-propelled, but move through the oviduct or uterus due to the peristaltic action of the tube walls, imposed pressure gradients, and perhaps ciliary motion. Here we use the method of regularized Stokeslets to model the transport of an ovum or an embryo within a peristaltic tube. We represent the ovum or the embryo as a spherical vesicle of finite volume - not a massless point particle. The outer membrane of the neutrally buoyant vesicle is discretized by nodes that are joined by a network of springs. The elastic moduli of these springs are chosen large enough so that a spherical shape is maintained. For simplicity, here we choose an axisymmetric tube where the geometry of the two-dimensional cross-section along the tube axis reflects that of the sagittal cross-section of the uterine cavity. Although the tube motion is axisymmetric, the presence of the vesicle within the tube requires a fully three-dimensional model. As was found in Yaniv et al. (2009, 2012) for a 2D closed channel, we find that the flow dynamics in a 3D peristaltic tube are strongly influenced by the closed end and the manner in which the peristaltic wave damps out towards the closure. In addition, we demonstrate that the trajectory of a vesicle of finite volume can greatly differ from the trajectory of a massless fluid particle initially placed at the vesicle׳s centroid. Copyright © 2015 Elsevier Ltd. All rights reserved.

  5. Three-Dimensional Changes in the Midface Following Malar Calcium Hydroxyapat