Beyond Sleep – a case study on textual instability and challenges for textual scholarship

NARCIS (Netherlands)

Kegel, P.W.

2016-01-01

Although W.F. Hermans’ novel Nooit meer slapen (Beyond Sleep) has been published within the multi-volume Complete Works edition already in 2010, the work remains a challenge for textual scholarship. First published in 1966, it has been revised by the author many times. Next to that, the actual

Emotion models for textual emotion classification

Science.gov (United States)

Bruna, O.; Avetisyan, H.; Holub, J.

2016-11-01

This paper deals with textual emotion classification which gained attention in recent years. Emotion classification is used in user experience, product evaluation, national security, and tutoring applications. It attempts to detect the emotional content in the input text and based on different approaches establish what kind of emotional content is present, if any. Textual emotion classification is the most difficult to handle, since it relies mainly on linguistic resources and it introduces many challenges to assignment of text to emotion represented by a proper model. A crucial part of each emotion detector is emotion model. Focus of this paper is to introduce emotion models used for classification. Categorical and dimensional models of emotion are explained and some more advanced approaches are mentioned.

Técnicas aplicadas al reconocimiento de implicación textual.

OpenAIRE

Herrera, Jesús; Peñas, Anselmo; Verdejo, Felisa

2005-01-01

Tras establecer qué se entiende por implicación textual, se expone la situación actual y el futuro deseable de los sistemas dirigidos a reconocerla. Se realiza una identificación de las técnicas que implementan actualmente los principales sistemas de Reconocimiento de Implicación Textual.

TRANS-TEXTUALIZATION AND CARNIVALIZATION IN "WHISTLER," BY ONDJAKI

Directory of Open Access Journals (Sweden)

Karine Miranda Campos

2013-04-01

Full Text Available This article aims to observe the phenomenon of carnivalization and trans­textuality the novel The Whistler, the Angolan writer Ondjaki. Comprise the theoretical analysis of Bakhtin’s theory on carnivalization and its im­portance for social subversion of monologic discourse established by of­ficial bodies, the theory of Gérard Genette on transtextuality pointing five possible textual relationships. An understanding of the theories and car­nivalization transtextuality pervades the concepts of animism and taboo presented the theory of Sigmund Freud.

Asteroid taxonomic classifications

International Nuclear Information System (INIS)

Tholen, D.J.

1989-01-01

This paper reports on three taxonomic classification schemes developed and applied to the body of available color and albedo data. Asteroid taxonomic classifications according to two of these schemes are reproduced

Textual analysis and machine leaning: Crack unstructured data in finance and accounting

Directory of Open Access Journals (Sweden)

Li Guo

2016-09-01

Full Text Available In finance and accounting, relative to quantitative methods traditionally used, textual analysis becomes popular recently despite of its substantially less precise manner. In an overview of the literature, we describe various methods used in textual analysis, especially machine learning. By comparing their classification performance, we find that neural network outperforms many other machine learning techniques in classifying news category. Moreover, we highlight that there are many challenges left for future development of textual analysis, such as identifying multiple objects within one single document.

Textual appropriation in engineering master's theses: a preliminary study.

Science.gov (United States)

Eckel, Edward J

2011-09-01

In the thesis literature review, an engineering graduate student is expected to place original research in the context of previous work by other researchers. However, for some students, particularly those for whom English is a second language, the literature review may be a mixture of original writing and verbatim source text appropriated without quotations. Such problematic use of source material leaves students vulnerable to an accusation of plagiarism, which carries severe consequences. Is such textual appropriation common in engineering master's writing? Furthermore, what, if anything, can be concluded when two texts have been found to have textual material in common? Do existing definitions of plagiarism provide a sufficient framework for determining if an instance of copying is transgressive or not? In a preliminary attempt to answer these questions, text strings from a random sample of 100 engineering master's theses from the ProQuest Dissertations and Theses database were searched for appropriated verbatim source text using the Google search engine. The results suggest that textual borrowing may indeed be a common feature of the master's engineering literature review, raising questions about the ability of graduate students to synthesize the literature. The study also illustrates the difficulties of making a determination of plagiarism based on simple textual similarity. A context-specific approach is recommended when dealing with any instance of apparent copying.

Effects of pictures and textual arguments in sun protection public service announcements.

Science.gov (United States)

Boer, Henk; Ter Huurne, Ellen; Taal, Erik

2006-01-01

The effect of public service announcements aimed at promoting primary prevention of skin cancer may be limited by superficial cognitive processing. The use of both pictures and textual arguments in sun protection public service announcements were evaluated for their potentially beneficial effects on judgment, cognitive processing and persuasiveness. In a 2 x 2 factorial experimental design individuals were shown public service announcements that advocated the advantages of sun protection measures in different versions in which a picture was present or not present and a textual argument was present or not present. The 159 participants were randomly assigned to one of four conditions. In each condition, participants were shown 12 different public service announcements designed according to the condition. Participants judged each public service announcement on attractiveness, credibility, clarity of communication and the required amount of reflection. After the judgment task, they completed a questionnaire to assess knowledge, perceived advantages and disadvantages of sun protection and intended use of sun protection measures. Pictures enhanced attractiveness, but diminished comprehension. Textual arguments enhanced attractiveness, credibility and comprehension. Pictures as well as textual arguments increased knowledge of sun protection measures. Pictures and textual arguments in public service announcements positively influence the individual's perception of the advantages of sun protection methods and the advantages of their adoption.

PESI - a taxonomic backbone for Europe

Science.gov (United States)

Kouwenberg, Juliana; Boumans, Louis; Hussey, Charles; Hyam, Roger; Nicolson, Nicola; Kirk, Paul; Paton, Alan; Michel, Ellinor; Guiry, Michael D.; Boegh, Phillip S.; Pedersen, Henrik Ærenlund; Enghoff, Henrik; von Raab-Straube, Eckhard; Güntsch, Anton; Geoffroy, Marc; Müller, Andreas; Kohlbecker, Andreas; Berendsohn, Walter; Appeltans, Ward; Arvanitidis, Christos; Vanhoorne, Bart; Declerck, Joram; Vandepitte, Leen; Hernandez, Francisco; Nash, Róisín; Costello, Mark John; Ouvrard, David; Bezard-Falgas, Pascale; Bourgoin, Thierry; Wetzel, Florian Tobias; Glöckler, Falko; Korb, Günther; Ring, Caroline; Hagedorn, Gregor; Häuser, Christoph; Aktaç, Nihat; Asan, Ahmet; Ardelean, Adorian; Borges, Paulo Alexandre Vieira; Dhora, Dhimiter; Khachatryan, Hasmik; Malicky, Michael; Ibrahimov, Shaig; Tuzikov, Alexander; De Wever, Aaike; Moncheva, Snejana; Spassov, Nikolai; Chobot, Karel; Popov, Alexi; Boršić, Igor; Sfenthourakis, Spyros; Kõljalg, Urmas; Uotila, Pertti; Olivier, Gargominy; Dauvin, Jean-Claude; Tarkhnishvili, David; Chaladze, Giorgi; Tuerkay, Michael; Legakis, Anastasios; Peregovits, László; Gudmundsson, Gudmundur; Ólafsson, Erling; Lysaght, Liam; Galil, Bella Sarah; Raimondo, Francesco M.; Domina, Gianniantonio; Stoch, Fabio; Minelli, Alessandro; Spungis, Voldermars; Budrys, Eduardas; Olenin, Sergej; Turpel, Armand; Walisch, Tania; Krpach, Vladimir; Gambin, Marie Therese; Ungureanu, Laurentia; Karaman, Gordan; Kleukers, Roy M.J.C.; Stur, Elisabeth; Aagaard, Kaare; Valland, Nils; Moen, Toril Loennechen; Bogdanowicz, Wieslaw; Tykarski, Piotr; Węsławski, Jan Marcin; Kędra, Monika; M. de Frias Martins, Antonio; Abreu, António Domingos; Silva, Ricardo; Medvedev, Sergei; Ryss, Alexander; Šimić, Smiljka; Marhold, Karol; Stloukal, Eduard; Tome, Davorin; Ramos, Marian A.; Valdés, Benito; Pina, Francisco; Kullander, Sven; Telenius, Anders; Gonseth, Yves; Tschudin, Pascal; Sergeyeva, Oleksandra; Vladymyrov, Volodymyr; Rizun, Volodymyr Bohdanovych; Raper, Chris; Lear, Dan; Stoev, Pavel; Penev, Lyubomir; Rubio, Ana Casino; Backeljau, Thierry; Saarenmaa, Hannu; Ulenberg, Sandrine

2015-01-01

Abstract Background Reliable taxonomy underpins communication in all of biology, not least nature conservation and sustainable use of ecosystem resources. The flexibility of taxonomic interpretations, however, presents a serious challenge for end-users of taxonomic concepts. Users need standardised and continuously harmonised taxonomic reference systems, as well as high-quality and complete taxonomic data sets, but these are generally lacking for non-specialists. The solution is in dynamic, expertly curated web-based taxonomic tools. The Pan-European Species-directories Infrastructure (PESI) worked to solve this key issue by providing a taxonomic e-infrastructure for Europe. It strengthened the relevant social (expertise) and information (standards, data and technical) capacities of five major community networks on taxonomic indexing in Europe, which is essential for proper biodiversity assessment and monitoring activities. The key objectives of PESI were: 1) standardisation in taxonomic reference systems, 2) enhancement of the quality and completeness of taxonomic data sets and 3) creation of integrated access to taxonomic information. New information This paper describes the results of PESI and its future prospects, including the involvement in major European biodiversity informatics initiatives and programs. PMID:26491393

Do tipo textual ao gênero de texto. A redação no vestibular / From textual type to textual genre. The essay in the university entrance exam

Directory of Open Access Journals (Sweden)

Maria Helena Cruz Pistori

2012-06-01

Full Text Available Os atuais documentos oficiais elaborados pelo Ministério da Educação no Brasil têm preconizado o ensino da produção textual por meio do gênero - discursivo ou textual. Seguindo essa linha, o exame vestibular de ingresso a uma das maiores universidades paulistas de 2011 também solicitou dos candidatos a elaboração de três textos, de diferentes gêneros. Com o objetivo de verificar que horizontes teórico-metodológicos fundamentaram a elaboração daquele exame, analisamos os textos do (1 Manual do Candidato, da (2 Prova de redação e da (3 Expectativa da banca. Nosso parâmetro teórico é o conceito de gênero discursivo conforme desenvolvido pelos membros do Círculo de Bakhtin desde 1920. Observamos, então, como essa nova proposta visa avaliar as características que a Universidade espera encontrar em cada um de seus alunos; como utiliza o arsenal teórico nos textos analisados e como garante a avaliação da capacidade argumentativa dos candidatos. Finalmente, sugerimos a possibilidade de trabalho com o gênero “dissertação escolar”.Today's official documents drawn up by the Ministry of Education in Brazil have advocated that textual production should be taught by the concepts of speech genre or textual genre. Following this guideline, the 2011 edition of the entrance exam, vestibular, of one of the most important universities in the state of São Paulo, Brazil, asked its candidates to write three texts, each one belonging to a different genre. In order to verify the theoretical-methodological horizons that motivated the elaboration of that exam, we analyzed the texts of (1 the candidate's guidelines, (2 the examination essay and (3 the expectations set by the examiners. Our theoretical perspective is the concept of discursive genre as developed by the members of the Bakhtin Circle since 1920. Then, we observe how this new proposal aims at evaluating the characteristics that the University expects to find in each one of

Reasoning over taxonomic change: exploring alignments for the Perelleschus use case.

Science.gov (United States)

Franz, Nico M; Chen, Mingmin; Yu, Shizhuo; Kianmajd, Parisa; Bowers, Shawn; Ludäscher, Bertram

2015-01-01

Classifications and phylogenetic inferences of organismal groups change in light of new insights. Over time these changes can result in an imperfect tracking of taxonomic perspectives through the re-/use of Code-compliant or informal names. To mitigate these limitations, we introduce a novel approach for aligning taxonomies through the interaction of human experts and logic reasoners. We explore the performance of this approach with the Perelleschus use case of Franz & Cardona-Duque (2013). The use case includes six taxonomies published from 1936 to 2013, 54 taxonomic concepts (i.e., circumscriptions of names individuated according to their respective source publications), and 75 expert-asserted Region Connection Calculus articulations (e.g., congruence, proper inclusion, overlap, or exclusion). An Open Source reasoning toolkit is used to analyze 13 paired Perelleschus taxonomy alignments under heterogeneous constraints and interpretations. The reasoning workflow optimizes the logical consistency and expressiveness of the input and infers the set of maximally informative relations among the entailed taxonomic concepts. The latter are then used to produce merge visualizations that represent all congruent and non-congruent taxonomic elements among the aligned input trees. In this small use case with 6-53 input concepts per alignment, the information gained through the reasoning process is on average one order of magnitude greater than in the input. The approach offers scalable solutions for tracking provenance among succeeding taxonomic perspectives that may have differential biases in naming conventions, phylogenetic resolution, ingroup and outgroup sampling, or ostensive (member-referencing) versus intensional (property-referencing) concepts and articulations.

Textual Input Enhancement for Vowel Blindness: A Study with Arabic ESL Learners

Science.gov (United States)

Alsadoon, Reem; Heift, Trude

2015-01-01

This study explores the impact of textual input enhancement on the noticing and intake of English vowels by Arabic L2 learners of English. Arabic L1 speakers are known to experience "vowel blindness," commonly defined as a difficulty in the textual decoding and encoding of English vowels due to an insufficient decoding of the word form.…

Punctuation as readability and textuality factor in technical discourse

Directory of Open Access Journals (Sweden)

Carmen Sancho Guinda

2002-04-01

Full Text Available This paper studies the incidence of punctuation on the reading comprehension of technical discourse and its role as a factor of textuality. Starting out from the notions of textuality and punctuation functions formulated by different linguistic approaches, an analysis has been made to quantify the decoding skills and punctuating competence of 60 Aeronautical Engineering students, as well as to determine the nature and effects of their punctuation errors. The survey has been focused on the Full Stop, the comma and the hyphen due to their highly conflicting uses as regards the identification of immediate sentence constituents and semantic relationships. The results obtained suggest that most students have a poor knowledge of punctuation rules and little awareness of punctuation as a textual elementaffecting readability. Errors are in the main related to comma use and produced by transference, either of Spanish punctuating habits into English, or of individual prosodic patterns into writing, while meaning appears to be the prevailing punctuating criterion over sound and syntax. Punctuation proves an effective tool for the anticipation of implicit meanings and an untapped resource in the teaching of the diverse communicative and stylistic possibilities offered by technical texts.

Reading comprehension and textual consciousness on primary school

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Vera Wannmacher Pereira

2014-03-01

Full Text Available The difficulties on reading comprehension in the primary school are evidenced by several official exams applied. Given these statistics and the evidences obtained through academic research and observations on children’s performance during the school life, there is acknowledgment of the situation as a problem that requires further development and finding solutions. The Psycholinguistics is giving its contribution, especially regarding the role of linguistic consciousness on reading learning. Many studies have been conducted specifically focusing on phonological consciousness. Studies on syntactic consciousness are also found, although less than phonological ones. Regarding the role of textual consciousness, few initiatives considers the students of the primary school. This makes the author proposes as the heartland of this communication the textual consciousness with support predominantly on Gombert (1992, aiming to examine the relationship between this level of consciousness and learning to read. Based on recent studies (PEREIRA; SCLIAR-CABRAL, 2012, the author presents in this paper: a the analysis of the context of learning and teaching of reading; b a theoretical exposition about reading learning and textual consciousness; c the pedagogical referrals for education based on the interaction between these two topics; and d the development of reflections on the possibility of the proposed path contribute to the solution of the worrying problem on read learning by the primary schools students.

Viagem, identidade e memória textual em Antonio Tabucchi

OpenAIRE

Melissa Cobra Torre

2012-01-01

Esta dissertação apresenta uma reflexão sobre a viagem, a identidade, o jogo e a memória textual na obra de Antonio Tabucchi, tendo em vista o romance 'Noturno Indiano' e os contos 'A frase a seguir é falsa. A frase anterior é verdadeira', 'Il gioco del rovescio', 'Piccoli equivoci senza importanza' e 'I treni che vanno a Madras'. Tem como objetivos repensar o tema da viagem em 'Noturno Indiano'; enfocar a questão da identidade no referido romance; discutir o jogo textual em 'Noturno Indiano'...

Combining textual and visual information for image retrieval in the medical domain.

Science.gov (United States)

Gkoufas, Yiannis; Morou, Anna; Kalamboukis, Theodore

2011-01-01

In this article we have assembled the experience obtained from our participation in the imageCLEF evaluation task over the past two years. Exploitation on the use of linear combinations for image retrieval has been attempted by combining visual and textual sources of images. From our experiments we conclude that a mixed retrieval technique that applies both textual and visual retrieval in an interchangeably repeated manner improves the performance while overcoming the scalability limitations of visual retrieval. In particular, the mean average precision (MAP) has increased from 0.01 to 0.15 and 0.087 for 2009 and 2010 data, respectively, when content-based image retrieval (CBIR) is performed on the top 1000 results from textual retrieval based on natural language processing (NLP).

Building a Taxonomic Data Editor: ITIS Taxonomic Workbench 6.0

OpenAIRE

Mitchell,David; Bowman,Lisa; Brockmeier,Christopher

2017-01-01

The Integrated Taxonomic Information System (ITIS - www.itis.gov) provides a regularly updated global database that currently contains over 840,000 scientific names and their hierarchy. A new rich Internet application for adding and editing ITIS data, Taxonomic Workbench 6.0, is being developed using the AngularJS framework. AngularJS is designed to take advantage of many features that are fairly recent to the web platform, facilitates a well-structured product that is easier to maintain, and...

Analyzing textual databases using data mining to enable fast product development processes

International Nuclear Information System (INIS)

Menon, Rakesh; Tong, Loh Han; Sathiyakeerthi, S.

2005-01-01

Currently, companies active in the design of high-tech products are confronted with a number of, often conflicting, challenges. Not only do they have to develop increasingly complex products in ever-shorter amounts of time but they also have to produce them cheaply for the local as well as global markets. In order to manage these conflicting trends adequately, as this paper will demonstrate, companies need to have high quality information at the right moment and at the right location. This serves as the motivation of this paper in which various databases within the product life cycle are examined. Due to the fact that unanticipated information plays a more and more dominant role, especially in highly innovative business processes, we focus our attention on textual databases since textual databases offer the best possibility to handle unanticipated free-formatted information. Also their treatment in the literature has thus far been scant. As will be demonstrated in this paper these databases have a huge potential for valuable information. Further, an analysis tool, data mining that could be used to analyse these textual databases so that we could extract information from them quickly and hence be able to access them at the right time when needed, is presented. We also highlight some of the difficulties faced when analyzing textual databases. Thus with the right information from the textual databases and the tools to deliver this information at the right time companies, would definitely be able to shorten development times and hence gain a competitive edge

In Defence of the Textual Integrity of the Old English Resignation

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Sobol Helena W.

2015-03-01

Full Text Available Bliss & Frantzen’s (1976 paper against the previously assumed textual integrity of Resignation has been a watershed in research upon the poem. Nearly all subsequent studies and editions have followed their theory, the sole dissenting view being expressed by Klinck (1987, 1992. The present paper offers fresh evidence for the textual unity of the poem. First examined are codicological issues, whether the state of the manuscript suggests that a folio might be missing. Next analysed are the spellings of Resignation and its phonology, here the paper discusses peculiarities which both differentiate Resignation from its manuscript context and connect the two hypothetical parts of the text. Then the paper looks at the assumed cut-off point at l.69 to see if it may provide any evidence for textual discontinuity. Finally the whole Resignation, seen as a coherent poem, is placed in the history of Old English literature, with special attention being paid to the traditions of devotional texts and the Old English elegies.

Exploring historical trends using taxonomic name metadata

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Schenk Ryan

2008-05-01

Full Text Available Abstract Background Authority and year information have been attached to taxonomic names since Linnaean times. The systematic structure of taxonomic nomenclature facilitates the ability to develop tools that can be used to explore historical trends that may be associated with taxonomy. Results From the over 10.7 million taxonomic names that are part of the uBio system 4, approximately 3 million names were identified to have taxonomic authority information from the years 1750 to 2004. A pipe-delimited file was then generated, organized according to a Linnaean hierarchy and by years from 1750 to 2004, and imported into an Excel workbook. A series of macros were developed to create an Excel-based tool and a complementary Web site to explore the taxonomic data. A cursory and speculative analysis of the data reveals observable trends that may be attributable to significant events that are of both taxonomic (e.g., publishing of key monographs and societal importance (e.g., world wars. The findings also help quantify the number of taxonomic descriptions that may be made available through digitization initiatives. Conclusion Temporal organization of taxonomic data can be used to identify interesting biological epochs relative to historically significant events and ongoing efforts. We have developed an Excel workbook and complementary Web site that enables one to explore taxonomic trends for Linnaean taxonomic groupings, from Kingdoms to Families.

Textual Enhancement of Input: Issues and Possibilities

Science.gov (United States)

Han, ZhaoHong; Park, Eun Sung; Combs, Charles

2008-01-01

The input enhancement hypothesis proposed by Sharwood Smith (1991, 1993) has stimulated considerable research over the last 15 years. This article reviews the research on textual enhancement of input (TE), an area where the majority of input enhancement studies have aggregated. Methodological idiosyncrasies are the norm of this body of research.…

A Textual Feedback Tool for Empowering Participants in Usability and UX Evaluations

DEFF Research Database (Denmark)

Sivaji, Ashok; Clemmensen, Torkil; Nielsen, Søren Feodor

2017-01-01

-educated, but low-status, users in UX evaluations in countries and contexts with high power distances. The proposed tool contributes to the HCI community’s pool of localized UX evaluation tools. We evaluate the tool with 40 users from two socio-economic groups in real-life UX usability evaluations setting...... in Malaysia. The results indicate that the Textual Feedback tool may help participants to give their thoughts in UX evaluation in high power distance contexts. In particular, the Textual Feedback tool helps high status females and low status males express more UX problems than they can do with traditional CTA...... alone. We found that classic concurrent think aloud UX evaluation works fine in high power contexts, but only with the addition of Textual feedback to mitigate the effects of socio-economic status in certain user groups. We suggest that future research on UX evaluation look more into how to empower...

La superación a los docentes para la producción textual

Directory of Open Access Journals (Sweden)

Rafaela Hinojosa Legrá

2017-11-01

Full Text Available La producción textual es uno de los componentes más afectados desde los primeros grados en la enseñanza de la Lengua Materna, entre las causas que lo provocan está la deficiente preparación de los docentes para ofrecer el tratamiento adecuado, este trabajo ofrece vías para la superación profesional respecto a la producción textual.

Extracting meronomy relations from domain-specific, textual corporate databases

NARCIS (Netherlands)

Ittoo, R.A.; Bouma, G.; Maruster, L.; Wortmann, J.C.; Hopfe, C.J.; Rezgui, Y.; Métais, E.; Preece, A.; Li, H.

2010-01-01

Various techniques for learning meronymy relationships from open-domain corpora exist. However, extracting meronymy relationships from domain-specific, textual corporate databases has been overlooked, despite numerous application opportunities particularly in domains like product development and/or

Finding Environmental Knowledge in SCUBA-Based Textual Materials

Science.gov (United States)

Gündogdu, Cemal; Aygün, Yalin; Ilkim, Mehmet

2018-01-01

As marine environments within the adventure domain are future key-settings for recreational SCUBA diving experience, SCUBA-based textual materials should provide insight into environmental knowledge that is well connected to the novice divers' behaviour and attitude. This research is concerned with a major recreational SCUBA diver manual for…

[Taxonomic theory for non-classical systematics].

Science.gov (United States)

Pavlinov, I Ia

2012-01-01

Outlined briefly are basic principles of construing general taxonomic theory for biological systematics considered in the context of non-classical scientific paradigm. The necessity of such kind of theory is substantiated, and some key points of its elaboration are exposed: its interpretation as a framework concept for the partial taxonomic theories in various schools of systematics; elaboration of idea of cognitive situation including three interrelated components, namely subject, object, and epistemic ones; its construing as a content-wisely interpreted quasi-axiomatics, with strong structuring of its conceptual space including demarcation between axioms and inferring rules; its construing as a "conceptual pyramid" of concepts of various levels of generality; inclusion of a basic model into definition of the taxonomic system (classification) regulating its content. Two problems are indicated as fundamental: definition of taxonomic diversity as a subject domain for the systematics as a whole; definition of onto-epistemological status of taxonomic system (classification) in general and of taxa in particular.

Textual and Pictorial Glosses: Effectiveness on Incidental Vocabulary Growth When Reading in a Foreign Language.

Science.gov (United States)

Kost, Claudia R.; Foss, Pamelo; Lenzini, John J.

1999-01-01

Investigates the effects of pictorial and textual glosses and a combination thereof on incidental vocabulary growth of foreign language learners. Subjects from second-semester German classes read a narrative text passage under one of three marginal gloss conditions: textual gloss (English translation); pictorial gloss; and text and pictures in the…

Charting taxonomic knowledge through ontologies and ranking algorithms

Science.gov (United States)

Huber, Robert; Klump, Jens

2009-04-01

Since the inception of geology as a modern science, paleontologists have described a large number of fossil species. This makes fossilized organisms an important tool in the study of stratigraphy and past environments. Since taxonomic classifications of organisms, and thereby their names, change frequently, the correct application of this tool requires taxonomic expertise in finding correct synonyms for a given species name. Much of this taxonomic information has already been published in journals and books where it is compiled in carefully prepared synonymy lists. Because this information is scattered throughout the paleontological literature, it is difficult to find and sometimes not accessible. Also, taxonomic information in the literature is often difficult to interpret for non-taxonomists looking for taxonomic synonymies as part of their research. The highly formalized structure makes Open Nomenclature synonymy lists ideally suited for computer aided identification of taxonomic synonyms. Because a synonymy list is a list of citations related to a taxon name, its bibliographic nature allows the application of bibliometric techniques to calculate the impact of synonymies and taxonomic concepts. TaxonRank is a ranking algorithm based on bibliometric analysis and Internet page ranking algorithms. TaxonRank uses published synonymy list data stored in TaxonConcept, a taxonomic information system. The basic ranking algorithm has been modified to include a measure of confidence on species identification based on the Open Nomenclature notation used in synonymy list, as well as other synonymy specific criteria. The results of our experiments show that the output of the proposed ranking algorithm gives a good estimate of the impact a published taxonomic concept has on the taxonomic opinions in the geological community. Also, our results show that treating taxonomic synonymies as part of on an ontology is a way to record and manage taxonomic knowledge, and thus contribute

Comparison of CTA and Textual Feedback in Usability Testing for Malaysian Users

DEFF Research Database (Denmark)

Sivaji, Ashok; Clemmensen, Torkil; Nielsen, Søren Feodor

Usability moderators found that the concurrent think-aloud (CTA) method has some cultural limitation that impacts usability testing with Malaysian users. This gives rise to proposing a new method called textual feedback. The research question is to determine whether there are any differences...... in usability defects from the concurrent think-aloud (CTA) method (Condition 2) and textual feedback method (Condition 1) within the same group of Malaysian users. A pair-wise t-test was used, whereby users were subjected to performing usability task using both methods. Results reveal that we can reject...

Textual Condensation in Printed Dictionaries. A Theoretical Draft·

African Journals Online (AJOL)

applying procedures of textual condensation in relation to a respective full text. The full text ..... and, if one does not consider the inserted wordforms, of the same number of letters. .... soccer clogging: the match turned into a rough game da32.

An Integrated Textual Case-Based System A. Almu

African Journals Online (AJOL)

Almu: An Integrated Textual Case-Based System. 66. The semantic relationship in WordNet links the Four-. Part-Of-Speech of Nouns, Verbs, Adverbs and. Adjectives together to synonyms sets (Miller 1995). Therefore, the words or terms of the problem have to be tagged with their appropriate POS before passing them to the ...

Textual standardization and the DSM-5 "common language".

Science.gov (United States)

Kelly, Patty A

2014-06-01

In February 2010, the American Psychiatric Association (APA) launched their DSM-5 website with details about the development of the fifth edition of the Diagnostic and Statistical Manual of Mental Disorders (DSM-5). The APA invited "the general public" to review the draft diagnostic criteria and provide written comments and suggestions. This revision marks the first time the APA has solicited public review of their diagnostic manual. This article analyzes reported speech on the DSM-5 draft diagnostic criteria for the classification Posttraumatic Stress Disorder. It demonstrates how textual standardization facilitates the cultural portability of the DSM-5 diagnostic criteria such that a community of speakers beyond the borders of the APA come to be seen as exemplary speakers, writers, and revisers of the professional style. Furthermore, analysis shows how co-authoring practices recontextualize the "voice" and persona of putative patient reported speech on Criterion D2. As a consequence of textual standardization, spoken discourse becomes recontextualized as the product of scientific inquiry and the organization of psychiatric knowledge.

Variations in Textualization: A Cross-generic and Cross-disciplinary Study, Implications for Readability of the Academic Discourse

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Mina Abbasi Bonabi

2018-01-01

Full Text Available According to discoursal views on language, variations in textualization strategies are always socio-contextually motivated and never happen at random. The textual forms employed in a text, along with many other discoursal and contextual factors, could certainly affect the readability of the text, making it more or less processable for the same reader. On the basis of these assumptions, the present study set out to examine how our data varied across genres and disciplines in terms of our target textual forms. These forms are as follows: the magnitude of T-unit (MOTU, the degree of embeddedness of the main verb in T-unit (DE, the physical distance between the verb and its satellite elements (PD, the magnitude of the noun phrase appearing before the verb (MOX, and the magnitude of noun phrase appearing after the verb (MOY. Our data consisted of 20 research articles randomly selected from two different disciplines of Biology and Applied Linguistics, to be analyzed in terms of the above-named textual strategies. One way ANOVA and post hoc Tukey tests were used for data analyses. The results revealed cross-generic as well as cross-disciplinary differences in the employment of the above textual forms. These findings were discussed in terms of the academic concepts and discourse on the one hand and the possible effect of the required textual forms on the readability of the text on the other hand.

Conexões entre produção textual e consciência lingüística

Directory of Open Access Journals (Sweden)

Soroka, Jaqueline Golbspan

1998-01-01

Full Text Available Este artigo examina a conexão entre consciência lingüística e produção textual, enfatizando os mecanismos coesivos e as etapas subjacentes ao processo de organização textual. Trata-se de uma investigação interdisciplinar a tipo exploratório, baseada nos pressupostos teóricos da psicologia cognitiva, da psicolingüística e da lingüística textual. Com o objetivo de verificar se o desempenho na produção textual - em termos de uso dos mecanismos coesivos - relaciona-se positivamente com o desenvolvimento da consciência lingüística, e se escritores com déficit na escrita redacional poderiam se beneficiar com uma abordagem terapêutica que estimule suas habilidades para refletir sobre a libguagem, foi desenvolvida nesta pesquisa uma etapa de 30 sessões de tratamento psicopedagógico grupal. Três sujeitos pré-adolescentes, de 11 a 14 anos de idade, integram o grupo (um dos sujeitos encontrava-se repetindo a 5ª série e os demais cursavam a 6ª série do 1º grau. Concluímos que a estimulação das habilidades metalingüísticas podem auxiliar os sujeitos com dificuldades escolares e desenvolver proficiência na produção textual, no que diz respeito ao monitoramento do uso dos mecanismos coesivos

The Target of the Question: A Taxonomy of Textual Features for Cambridge University "O" Levels English

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Benjamin, Shanti Isabelle

2015-01-01

This study investigates the typical textual features that are most frequently targeted in short-answer reading comprehension questions of the Cambridge University "O" Level English Paper 2. Test writers' awareness of how textual features impact on understanding of meanings in text decisions will determine to great extent their decisions…

Recognizing textual entailment models and applications

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Dagan, Ido; Sammons, Mark

2013-01-01

In the last few years, a number of NLP researchers have developed and participated in the task of Recognizing Textual Entailment (RTE). This task encapsulates Natural Language Understanding capabilities within a very simple interface: recognizing when the meaning of a text snippet is contained in the meaning of a second piece of text. This simple abstraction of an exceedingly complex problem has broad appeal partly because it can be conceived also as a component in other NLP applications, from Machine Translation to Semantic Search to Information Extraction. It also avoids commitment to any sp

“Famoso [y valiente] hidalgo”: sobre conjeturas y deturpaciones textuales

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Florencio Sevilla Arroyo

2007-12-01

Full Text Available The textual manipulations to which the epigraph of the first chapter of El ingenioso hidalgo don Quijote de la Mancha has recently been subjected to offer an obvious example of Textual Bibliography critical threats when handled carelessly. Although it is true that spurious textual “changes” caused by the “printing by forms” and its “count of the original text” were current in Golden Age manual presses, the risk of distortions that threaten its non-well-informed amendment is also evident. In this case, a restitution of a supposed involuntary omission by the compositors is pretended, famoso [y valiente] hidalgo, which runs away from the first chapter’s epigraph in the original text of the Quijote, under the evidence from the first edition “Tabla de los capítulos”. Nevertheless, there are many typographical evidences that lead to conclude exactly the opposite: it is rather an apocryphal appendix, introduced by the compositor of the “Tabla” from an original famoso y valiente, and aimed just to solve a remaining blank in the last gathering of the book. The amendment, thus, far from restoring the original text, distorts Cervantine writing replacing it for an evident typographical trap. It would be necessary to bear in mind that the only Cervantine text of the first Quijote with critical authority went out of Juan de la Cuesta’s printing presses around Christmas in 1604- 1605...

Textual meaning and its place in a theory of language

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Jeffries Lesley

2015-06-01

Full Text Available Following the development of a framework for critical stylistics (Jeffries 2010 and the explication of some of the theoretical assumptions behind this framework (Jeffries 2014a, 2014b, 2015a, 2015b, the present article attempts to put this framework into a larger theoretical context as a way to approach textual meaning. Using examples from the popular U.S. television show, The Big Bang Theory, I examine the evidence that there is a kind of textual meaning which can be distinguished from the core propositional meaning on the one hand and from contextual, interpersonal meaning on the other. The specific aim, to demonstrate a layer of meaning belonging to text specifically, is set within an argument which claims that progress in linguistics can better be served by adherence to a rigorous scientific discipline.

An analysis for understanding the process of textual deconstruction as a motivator for learning

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Ana Delia Barrera Jiménez

2010-03-01

Full Text Available The present article aims to analyze the potential of the process of textual understanding and construction, for the development of motivation towards learning in teacher trainees for Preuniversities. In this direction it advocates in the first place, to understand the dynamic relationship established between the process of textual attribution and production and the motivational one, which provides the indispensable condition for promoting the work with the text from all the subjects in the curriculum.

Suggestions toward some discourse-analytic approaches to text difficulty: with special reference to ‘T-unit configuration’ in the textual unfolding

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Kazem Lotfipour-Saedi

2015-01-01

Full Text Available This paper represents some suggestions towards discourse-analytic approaches for ESL/EFL education, with the focus on identifying the textual forms which can contribute to the textual difficulty. Textual difficulty / comprehensibility, rather than being purely text-based or reader-dependent, is certainly a matter of interaction between text and reader. The paper will look at some of the textual factors which can be argued to make a text more or less readable for the same reader. The main focus here will be on academic texts. The high cognitive load and low readability of the expository texts in various academic disciplines will be argued to belong to certain textual strategies as well as variations in the configurations of the T-units as the prime scaffolding for the textualization process. Different categories of these variations to be discussed here will be exemplified from a few academic and expository registers. More extensive textual analyses will, of course, be necessary in order to be able to make evidential suggestions for possible correlations between certain types and clusters of T-unit configurations on the one hand, and cognitive load and readability indices on the other, across various academic registers, genres and disciplines.

Biomedical Imaging Modality Classification Using Combined Visual Features and Textual Terms

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Xian-Hua Han

2011-01-01

extraction from medical images and fuses the different extracted visual features and textual feature for modality classification. To extract visual features from the images, we used histogram descriptor of edge, gray, or color intensity and block-based variation as global features and SIFT histogram as local feature. For textual feature of image representation, the binary histogram of some predefined vocabulary words from image captions is used. Then, we combine the different features using normalized kernel functions for SVM classification. Furthermore, for some easy misclassified modality pairs such as CT and MR or PET and NM modalities, a local classifier is used for distinguishing samples in the pair modality to improve performance. The proposed strategy is evaluated with the provided modality dataset by ImageCLEF 2010.

ESTUDIO SOBRE LOS ABSTRACTS DE ARTÍCULOS DE INVESTIGACIÓN INFORMÁTICOS: EVIDENCIALIDAD Y MODALIDAD TEXTUAL

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Ivalla Ortega Barrera

2010-10-01

Full Text Available Evidentiality and textual modality are widely debated fi eld categories within the areas of linguistics and textual stylistics. The attitude of the author towards the topic indicates its commitment with the established proposition. In this way, his attitude can have either a rational/evaluative character (objective or an emotional/expressive character (subjective, which thus conveys the tonality of the discourse. The present paper, which forms part of the research project "Evidentiality in a multidisciplinary corpus of research papers in English" of the University of Las Palmas de Gran Canaria, focuses on the genre "abstracts of research papers applied to computer science". In this paper we will analyse two types of characteristic functions: the communicative stamp of the markers which correspond to textual modality, both objective and subjective according to their relationship with the evidential and judgement markers, and the frequency of its use in the genre we are studying.

The convent of Jericho in Brussels and its literary network

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Stoop, Patricia

2014-06-01

Full Text Available The Augustinian convent of Jericho in Brussels was one of the main centres of textual, literary, and spiritual culture in the late medieval Low Countries. In addition to the large collection of manuscripts which the canonesses wrote for themselves, the sisters produced several books for people and institutions outside the convent walls. Thus the sisters were both important recipients as well as signifi cant producers of texts. This article will focus on the question of the origin of the texts and books that the sisters used to build their library. Additionally, attention will be paid to the external recipients of the books that the Jericho scribes made, in order to shed light on the as yet understudied exchange of texts and books to and from (female convents and the literary networks in which these religious institutions functioned.El convento de las agustinas Jericó en Bruselas fue uno de los centros más importantes de la cultura textual, literaria, y espiritual en los Países Bajos durante la Baja Edad Media. Además de la amplia colección de manuscritos que las canonesas escribieron para sí mismas, produjeron varios libros para personas e instituciones externas al convento. Las religiosas no solo eran receptoras importantes, sino también signifi cativas productoras de textos. El artículo se concentra en la cuestión de la proveniencia de los textos y libros que servían para crear su biblioteca. Se prestará asimismo atención a los destinatarios externos a los que se dirigieron las copistas de Jericó con el fin de arrojar luz sobre la hasta ahora poco estudiada dinámica de intercambio de textos y libros entre conventos (de mujeres y el exterior y las redes literarias en el marco de las cuales esas instituciones religiosas funcionaron.

Benjamin’s Dialectical Image and the Textuality of the Built Landscape

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Ross Lipton

2016-05-01

Full Text Available In The Arcades Project, Walter Benjamin describes the architectural expression of nineteenth century Paris as a dialectical manifestation of backwards-looking historicism and the dawn of modern industrial production (in the form of cast iron and mass produced plate glass. Yet in the same text, Benjamin refers to the dialectical image as occurring within the medium of written language. In this paper, I will first discuss the textuality of the dialectical image as it emerges from Benjamin’s discussion of allegorical and symbolic images in his Trauerspiel study and the ‘wish symbol’ in The Arcades Project. I will then discuss the ‘textual reductionism’ implicit in Benjamin’s theory of the dialectical image, in which the dense pluralities of urban space are reduced to a finite script to be pieced together through Benjamin’s constructivist method of historical observation. The textuality of the dialectical image will be elaborated on by discussing it in relation to the practice of translation. This discussion will be further contextualised by discussing a cadre of German/Austrian planners and architects who attempted to translate architectural idioms between cultural identities in Kemalist Era Turkey. The article concludes with a short recapitulation on the dialectical image as both an object of scrutiny and a method of observation, one which also takes into consideration the specific historicity of the observer.

Taxonomic names, metadata, and the Semantic Web

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Roderic D. M. Page

2006-01-01

Full Text Available Life Science Identifiers (LSIDs offer an attractive solution to the problem of globally unique identifiers for digital objects in biology. However, I suggest that in the context of taxonomic names, the most compelling benefit of adopting these identifiers comes from the metadata associated with each LSID. By using existing vocabularies wherever possible, and using a simple vocabulary for taxonomy-specific concepts we can quickly capture the essential information about a taxonomic name in the Resource Description Framework (RDF format. This opens up the prospect of using technologies developed for the Semantic Web to add ``taxonomic intelligence" to biodiversity databases. This essay explores some of these ideas in the context of providing a taxonomic framework for the phylogenetic database TreeBASE.

On the metaphorical nature of intellectual capital: a textual analysis

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Dr. Daan Andriessen

2006-01-01

Purpose – To analyse common metaphors used in the intellectual capital (IC) and knowledge management literatures to conceptualise knowledge, in order to study the nature of the intellectual capital concept. Design/methodology/approach – A textual analysis methodology is used to analyse texts

Variations in Textualization: A Cross-Generic and Cross-Disciplinary Study, Implications for Readability of the Academic Discourse

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Bonabi, Mina Abbasi; Lotfipour-Saedi, Kazem; Hemmati, Fatemeh; Jafarigohar, Manoochehr

2018-01-01

According to discoursal views on language, variations in textualization strategies are always sociocontextually motivated and never happen at random. The textual forms employed in a text, along with many other discoursal and contextual factors, could certainly affect the readability of the text, making it more or less processable for the same…

Taxonomic chauvinism revisited: insight from parental care research.

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Zachary R Stahlschmidt

Full Text Available Parental care (any non-genetic contribution by a parent that appears likely to increase the fitness of its offspring is a widespread trait exhibited by a broad range of animal taxa. In addition to influencing the fitness of parent(s and offspring, parental care may be inextricably involved in other evolutionary processes, such as sexual selection and the evolution of endothermy. Yet, recent work has demonstrated that bias related to taxonomy is prevalent across many biological disciplines, and research in parental care may be similarly burdened. Thus, I used parental care articles published in six leading journals of fundamental behavioral sciences (Animal Behaviour, Behavioral Ecology, Behavioral Ecology and Sociobiology, Ethology, Hormones and Behavior, and Physiology & Behavior from 2001-2010 (n = 712 to examine the year-to-year dynamics of two types of bias related to taxonomy across animals: (1 taxonomic bias, which exists when research output is not proportional to the frequency of organisms in nature, and (2 taxonomic citation bias, which is a proxy for the breadth of a given article-specifically, the proportion of articles cited that refer solely to the studied taxon. I demonstrate that research on birds likely represents a disproportionate amount of parental care research and, thus, exhibits taxonomic bias. Parental care research on birds and mammals also refers to a relatively narrow range of taxonomic groups when discussing its context and, thus, exhibits taxonomic citation bias. Further, the levels of taxonomic bias and taxonomic citation bias have not declined over the past decade despite cautionary messages about similar bias in related disciplines--in fact, taxonomic bias may have increased. As in Bonnet et al. (2002, my results should not be interpreted as evidence of an 'ornithological Mafia' conspiring to suppress other taxonomic groups. Rather, I generate several rational hypotheses to determine why bias persists and to

Taxonomic chauvinism revisited: insight from parental care research.

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Stahlschmidt, Zachary R

2011-01-01

Parental care (any non-genetic contribution by a parent that appears likely to increase the fitness of its offspring) is a widespread trait exhibited by a broad range of animal taxa. In addition to influencing the fitness of parent(s) and offspring, parental care may be inextricably involved in other evolutionary processes, such as sexual selection and the evolution of endothermy. Yet, recent work has demonstrated that bias related to taxonomy is prevalent across many biological disciplines, and research in parental care may be similarly burdened. Thus, I used parental care articles published in six leading journals of fundamental behavioral sciences (Animal Behaviour, Behavioral Ecology, Behavioral Ecology and Sociobiology, Ethology, Hormones and Behavior, and Physiology & Behavior) from 2001-2010 (n = 712) to examine the year-to-year dynamics of two types of bias related to taxonomy across animals: (1) taxonomic bias, which exists when research output is not proportional to the frequency of organisms in nature, and (2) taxonomic citation bias, which is a proxy for the breadth of a given article-specifically, the proportion of articles cited that refer solely to the studied taxon. I demonstrate that research on birds likely represents a disproportionate amount of parental care research and, thus, exhibits taxonomic bias. Parental care research on birds and mammals also refers to a relatively narrow range of taxonomic groups when discussing its context and, thus, exhibits taxonomic citation bias. Further, the levels of taxonomic bias and taxonomic citation bias have not declined over the past decade despite cautionary messages about similar bias in related disciplines--in fact, taxonomic bias may have increased. As in Bonnet et al. (2002), my results should not be interpreted as evidence of an 'ornithological Mafia' conspiring to suppress other taxonomic groups. Rather, I generate several rational hypotheses to determine why bias persists and to guide future

A Falsification of the Citation Impediment in the Taxonomic Literature.

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Steiner, Florian M; Pautasso, Marco; Zettel, Herbert; Moder, Karl; Arthofer, Wolfgang; Schlick-Steiner, Birgit C

2015-09-01

Current science evaluation still relies on citation performance, despite criticisms of purely bibliometric research assessments. Biological taxonomy suffers from a drain of knowledge and manpower, with poor citation performance commonly held as one reason for this impediment. But is there really such a citation impediment in taxonomy? We compared the citation numbers of 306 taxonomic and 2291 non-taxonomic research articles (2009-2012) on mosses, orchids, ciliates, ants, and snakes, using Web of Science (WoS) and correcting for journal visibility. For three of the five taxa, significant differences were absent in citation numbers between taxonomic and non-taxonomic papers. This was also true for all taxa combined, although taxonomic papers received more citations than non-taxonomic ones. Our results show that, contrary to common belief, taxonomic contributions do not generally reduce a journal's citation performance and might even increase it. The scope of many journals rarely featuring taxonomy would allow editors to encourage a larger number of taxonomic submissions. Moreover, between 1993 and 2012, taxonomic publications accumulated faster than those from all biological fields. However, less than half of the taxonomic studies were published in journals in WoS. Thus, editors of highly visible journals inviting taxonomic contributions could benefit from taxonomy's strong momentum. The taxonomic output could increase even more than at its current growth rate if: (i) taxonomists currently publishing on other topics returned to taxonomy and (ii) non-taxonomists identifying the need for taxonomic acts started publishing these, possibly in collaboration with taxonomists. Finally, considering the high number of taxonomic papers attracted by the journal Zootaxa, we expect that the taxonomic community would indeed use increased chances of publishing in WoS indexed journals. We conclude that taxonomy's standing in the present citation-focused scientific landscape could

THE POTENCIALITY OF TRANSMEDIA NARRATIVE AND THE PRACTICE OF READING AND TEXTUAL PRODUCTION

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Daniella de Jesus Lima

2017-08-01

Full Text Available In this article we have reflect on the digital culture and its implications in education field, emphasizing the characteristics of the transmedia narrative. The objectives were to discuss the relationship between transmediation and the education, based on the methodology of teaching of textual genres with students of the social communication course - journalism of a private university in the brazilian northeast. We also used as methodology the bibliographic research and participant observation. As a result, we conclude that the elements of the transmedia narrative in the students's textual production have presented advantages and improvements for the educational process.

Discourses of Plagiarism: Moralist, Proceduralist, Developmental and Inter-Textual Approaches

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Kaposi, David; Dell, Pippa

2012-01-01

This paper reconstructs prevalent academic discourses of student plagiarism: moralism, proceduralism, development, and writing/inter-textuality. It approaches the discourses from three aspects: intention, interpretation and the nature of the academic community. It argues that the assumptions of the moralistic approach regarding suspect intention,…

Generation of Natural-Language Textual Summaries from Longitudinal Clinical Records.

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Goldstein, Ayelet; Shahar, Yuval

2015-01-01

Physicians are required to interpret, abstract and present in free-text large amounts of clinical data in their daily tasks. This is especially true for chronic-disease domains, but holds also in other clinical domains. We have recently developed a prototype system, CliniText, which, given a time-oriented clinical database, and appropriate formal abstraction and summarization knowledge, combines the computational mechanisms of knowledge-based temporal data abstraction, textual summarization, abduction, and natural-language generation techniques, to generate an intelligent textual summary of longitudinal clinical data. We demonstrate our methodology, and the feasibility of providing a free-text summary of longitudinal electronic patient records, by generating summaries in two very different domains - Diabetes Management and Cardiothoracic surgery. In particular, we explain the process of generating a discharge summary of a patient who had undergone a Coronary Artery Bypass Graft operation, and a brief summary of the treatment of a diabetes patient for five years.

Improved medical image modality classification using a combination of visual and textual features.

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Dimitrovski, Ivica; Kocev, Dragi; Kitanovski, Ivan; Loskovska, Suzana; Džeroski, Sašo

2015-01-01

In this paper, we present the approach that we applied to the medical modality classification tasks at the ImageCLEF evaluation forum. More specifically, we used the modality classification databases from the ImageCLEF competitions in 2011, 2012 and 2013, described by four visual and one textual types of features, and combinations thereof. We used local binary patterns, color and edge directivity descriptors, fuzzy color and texture histogram and scale-invariant feature transform (and its variant opponentSIFT) as visual features and the standard bag-of-words textual representation coupled with TF-IDF weighting. The results from the extensive experimental evaluation identify the SIFT and opponentSIFT features as the best performing features for modality classification. Next, the low-level fusion of the visual features improves the predictive performance of the classifiers. This is because the different features are able to capture different aspects of an image, their combination offering a more complete representation of the visual content in an image. Moreover, adding textual features further increases the predictive performance. Finally, the results obtained with our approach are the best results reported on these databases so far. Copyright © 2014 Elsevier Ltd. All rights reserved.

Integrating textual and model-based process descriptions for comprehensive process search

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Leopold, Henrik; van der Aa, Han; Pittke, Fabian; Raffel, Manuel; Mendling, Jan; Reijers, Hajo A.

2016-01-01

Documenting business processes using process models is common practice in many organizations. However, not all process information is best captured in process models. Hence, many organizations complement these models with textual descriptions that specify additional details. The problem with this

Shaping Up? Three Acts of Education Studies as Textual Critique

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McDougall, Julian; Walker, Stephen; Kendall, Alex

2006-01-01

This paper presents a study of dominant educational discourses through textual critique and argues that such an approach enables education studies to preserve an important distinction from teacher training. The texts deconstructed here are specific to English education, but the discourses at work have international relevance as the rhetorics of…

Textual, Genre and Social Features of Spoken Grammar: A Corpus-Based Approach

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Carmen Pérez-Llantada

2009-02-01

Full Text Available This paper describes a corpus-based approach to teaching and learning spoken grammar for English for Academic Purposes with reference to Bhatia’s (2002 multi-perspective model for discourse analysis: a textual perspective, a genre perspective and a social perspective. From a textual perspective, corpus-informed instruction helps students identify grammar items through statistical frequencies, collocational patterns, context-sensitive meanings and discoursal uses of words. From a genre perspective, corpus observation provides students with exposure to recurrent lexico-grammatical patterns across different academic text types (genres. From a social perspective, corpus models can be used to raise learners’ awareness of how speakers’ different discourse roles, discourse privileges and power statuses are enacted in their grammar choices. The paper describes corpus-based instructional procedures, gives samples of learners’ linguistic output, and provides comments on the students’ response to this method of instruction. Data resulting from the assessment process and student production suggest that corpus-informed instruction grounded in Bhatia’s multi-perspective model can constitute a pedagogical approach in order to i obtain positive student responses from input and authentic samples of grammar use, ii help students identify and understand the textual, genre and social aspects of grammar in real contexts of use, and therefore iii help develop students’ ability to use grammar accurately and appropriately.

Converting Taxonomic Descriptions to New Digital Formats

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Hong Cui

2008-01-01

Full Text Available Abstract.--The majority of taxonomic descriptions is currently in print format. The majority of digital descriptions are in formats such as DOC, HTML, or PDF and for human readers. These formats do not convey rich semantics in taxonomic descriptions for computer-aided process. Newer digital formats such as XML and RDF accommodate semantic annotations that allow computers to process the rich semantics on human's behalf, thus open up opportunities for a wide range of innovative usages of taxonomic descriptions, such as searching in more precise and flexible ways, integrating with gnomic and geographic information, generating taxonomic keys automatically, and text data mining and information visualization etc. This paper discusses the challenges in automated conversion of multiple collections of descriptions to XML format and reports an automated system, MARTT. MARTT is a machine-learning system that makes use of training examples to tag new descriptions into XML format. A number of utilities are implemented as solutions to the challenges. The utilities are used to reduce the effort for training example preparation, to facilitate the creation of a comprehensive schema, and to predict system performance on a new collection of descriptions. The system has been tested with several plant and alga taxonomic publications including Flora of China and Flora of North America.

Legitimate Textual Borrowing: Direct Quotation in L2 Student Writing

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Petric, Bojana

2012-01-01

Using textual analysis and interviews with student writers, this study aims to provide an insight into second language students' use of direct quotations in their MA theses by comparing direct quotations in high-rated and low-rated Master's theses, and by exploring student writers' own motivations to quote directly from sources. The corpus…

SECRETARIAT AND TEXTUAL PRODUCTION: ARGUMENTATION IN THE TEXTUAL GENRE LETTER OF DECLARATION

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Erivaldo Pereira do Nascimento

2012-05-01

Full Text Available This article aims at describing the semantic argumentative structure of the textual/discursive genre Letter of Declaration, one of the documents with which the executive secretary frequently deals. This investigation is based on the Argumention Theory in the Language proposed by Ducrot (1988,1987. We also used the studies about Discursive Modalization proposed by Koch (2002, Castilho e Castilho (1993, Nascimento (2005, among others. Modalization is considered here as a semantic argumentative strategy, as it enables the speaker to make a statement or to express a point of view about the content of his/her enunciation, according to the interlocution. This study about the previously mentioned gender is qualitative, quantitative and descriptive. The corpus used is composed of 20 (twenty Letters of Declaration issued by different organizations or private and public institutions. We perceived that in the Letters of Declaration analysed argumentation is achieved by the use of modalizers and argumentative operators, used by the speaker to produce different effects of meaning in the texts.

Comprensión y Producción Textual Narrativa en Estudiantes de Educación Primaria/ Narrative Textual Comprehension and Production in Primary School Students/ Compreensão e Produção Textual Narrativa em Estudantes de Educação Primária

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Leidy Tatiana Guzmán Torres

2015-05-01

Full Text Available Por medio de un enfoque mixto, se caracterizó la comprensión y producción textual narrativa en estudiantes de educación primaria (primero y segundo grado, así como aspectos psicosociales (valor social de la lectura y hábito lector y contextuales (interacciones cognitivas y afectivas docente-niños en docentes de educación primaria de tres instituciones educativas. Se encontró que los estudiantes tuvieron un desempeño medio alto en producción textual y comprensión literal, y bajo en comprensión inferencial. Además, se observó que la mayoría de las docentes son lectoras ocasionales, emplean interacciones cognitivas unidireccionales, ofrecen un mediano apoyo emocional a sus estudiantes y valoran la lectura como una herramienta instrumental y lúdica.

STATISTICAL RELATIONAL LEARNING AND SCRIPT INDUCTION FOR TEXTUAL INFERENCE

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2017-12-01

compensate for parser errors. We replace deterministic conjunction by an average combiner, which encodes causal independence. Our framework was the...sentence similarity (STS) and sentence paraphrasing, but not Textual Entailment, where deeper inferences are required. As the formula for conjunction ...When combined, our algorithm learns to rely on systems that not just agree on an output but also the provenance of this output in conjunction with the

Biomedical imaging modality classification using combined visual features and textual terms.

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Han, Xian-Hua; Chen, Yen-Wei

2011-01-01

We describe an approach for the automatic modality classification in medical image retrieval task of the 2010 CLEF cross-language image retrieval campaign (ImageCLEF). This paper is focused on the process of feature extraction from medical images and fuses the different extracted visual features and textual feature for modality classification. To extract visual features from the images, we used histogram descriptor of edge, gray, or color intensity and block-based variation as global features and SIFT histogram as local feature. For textual feature of image representation, the binary histogram of some predefined vocabulary words from image captions is used. Then, we combine the different features using normalized kernel functions for SVM classification. Furthermore, for some easy misclassified modality pairs such as CT and MR or PET and NM modalities, a local classifier is used for distinguishing samples in the pair modality to improve performance. The proposed strategy is evaluated with the provided modality dataset by ImageCLEF 2010.

Linnaeus' restless system: translation as textual engineering in eighteenth-century botany.

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Dietz, Bettina

2016-04-01

In this essay, translations of Linnaeus' Systema naturae into various European languages will be placed into the context of successively expanded editions of Linnaeus' writings. The ambition and intention of most translators was not only to make the Systema naturae accessible for practical botanical use by a wider readership, but also to supplement and correct it, and thus to shape it. By recruiting more users, translations made a significant contribution to keeping the Systema up to date and thus maintaining its practical value for decades. The need to incorporate countless additions and corrections into an existing text, to document their provenance, to identify inconsistencies, and to refer to relevant observations, descriptions, and illustrations in the botanical literature all helped to develop and refine techniques of textual montage. This form of textual engineering, becoming increasingly complex with each translation cycle, shaped the external appearance of new editions of the Systema, and reflected the modular architecture of a botanical system designed for expansion.

Investigating Differential Learning Outcomes of Students in Physics Using Animation and Textual Information Teaching Strategies in Ondo State Secondary School

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Blessing Eguabor

2017-06-01

Full Text Available BackgroundThe study investigated the main effects of animation information and textual information on students'performance and improving students' attitude towards physics.Material and methodsThe study adopted the pre-test post-test control group design. The population was made up of SSS 2 students inOndo State. Three Local Government Areas were randomly selected from the 18 Local Government Areas ofOndo State. Simple random technique was used to select three schools in the selected Local Government Areas.The schools were randomly assigned to two experimental groups namely animation and, textual informationstrategy and one control group. Two instruments were used for the study.ResultsOne-way Analysis of Variance (ANOVA, Scheffe Post-Hoc pair-wise comparison Analysis, and two-way Analysisof Variance was used. The results showed that there was a significant main effect of animation and textual strategieson students performance in physics. The results also showed that there was a significant difference in the post testattitudinal score of students' exposed to the strategies with the effectiveness in the order of animation, textual, andconventional strategiesConclusionsThe study concluded that computer- based instruction such as animation and textual strategies could enhancelearning outcomes in Physics in senior secondary school irrespective of students' sex.

Taxonomic colouring of phylogenetic trees of protein sequences

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Andrade-Navarro Miguel A

2006-02-01

Full Text Available Abstract Background Phylogenetic analyses of protein families are used to define the evolutionary relationships between homologous proteins. The interpretation of protein-sequence phylogenetic trees requires the examination of the taxonomic properties of the species associated to those sequences. However, there is no online tool to facilitate this interpretation, for example, by automatically attaching taxonomic information to the nodes of a tree, or by interactively colouring the branches of a tree according to any combination of taxonomic divisions. This is especially problematic if the tree contains on the order of hundreds of sequences, which, given the accelerated increase in the size of the protein sequence databases, is a situation that is becoming common. Results We have developed PhyloView, a web based tool for colouring phylogenetic trees upon arbitrary taxonomic properties of the species represented in a protein sequence phylogenetic tree. Provided that the tree contains SwissProt, SpTrembl, or GenBank protein identifiers, the tool retrieves the taxonomic information from the corresponding database. A colour picker displays a summary of the findings and allows the user to associate colours to the leaves of the tree according to any number of taxonomic partitions. Then, the colours are propagated to the branches of the tree. Conclusion PhyloView can be used at http://www.ogic.ca/projects/phyloview/. A tutorial, the software with documentation, and GPL licensed source code, can be accessed at the same web address.

Joint Textual And Visual Cues For Retrieving Images Using Latent Semantic Indexing

OpenAIRE

Pecenovic, Zoran; Ayer, Serge; Vetterli, Martin

2001-01-01

In this article we present a novel approach of integrating textual and visual descriptors of images in a unified retrieval structure. The methodology, inspired from text retrieval and information filtering is based on Latent Semantic Indexing (LS1).

Current Taxonomical Situation of Streptococcus suis.

Science.gov (United States)

Okura, Masatoshi; Osaki, Makoto; Nomoto, Ryohei; Arai, Sakura; Osawa, Ro; Sekizaki, Tsutomu; Takamatsu, Daisuke

2016-06-24

Streptococcus suis, a major porcine pathogen and an important zoonotic agent, is considered to be composed of phenotypically and genetically diverse strains. However, recent studies reported several "S. suis-like strains" that were identified as S. suis by commonly used methods for the identification of this bacterium, but were regarded as distinct species from S. suis according to the standards of several taxonomic analyses. Furthermore, it has been suggested that some S. suis-like strains can be assigned to several novel species. In this review, we discuss the current taxonomical situation of S. suis with a focus on (1) the classification history of the taxon of S. suis; (2) S. suis-like strains revealed by taxonomic analyses; (3) methods for detecting and identifying this species, including a novel method that can distinguish S. suis isolates from S. suis-like strains; and (4) current topics on the reclassification of S. suis-like strains.

Absorbing stories : The effects of textual devices on absorption and evaluative responses

NARCIS (Netherlands)

Kuijpers, Moniek

2014-01-01

In previous research on absorption, the focus has been primarily on the reader
and only little systematic empirical investigation of the possible textual determinants of absorption has been conducted. Furthermore, no attention has been paid to the relationship between aesthetic experiences, such as

Taxonomic bias in biodiversity data and societal preferences.

Science.gov (United States)

Troudet, Julien; Grandcolas, Philippe; Blin, Amandine; Vignes-Lebbe, Régine; Legendre, Frédéric

2017-08-22

Studying and protecting each and every living species on Earth is a major challenge of the 21 st century. Yet, most species remain unknown or unstudied, while others attract most of the public, scientific and government attention. Although known to be detrimental, this taxonomic bias continues to be pervasive in the scientific literature, but is still poorly studied and understood. Here, we used 626 million occurrences from the Global Biodiversity Information Facility (GBIF), the biggest biodiversity data portal, to characterize the taxonomic bias in biodiversity data. We also investigated how societal preferences and taxonomic research relate to biodiversity data gathering. For each species belonging to 24 taxonomic classes, we used the number of publications from Web of Science and the number of web pages from Bing searches to approximate research activity and societal preferences. Our results show that societal preferences, rather than research activity, strongly correlate with taxonomic bias, which lead us to assert that scientists should advertise less charismatic species and develop societal initiatives (e.g. citizen science) that specifically target neglected organisms. Ensuring that biodiversity is representatively sampled while this is still possible is an urgent prerequisite for achieving efficient conservation plans and a global understanding of our surrounding environment.

Use of a Modified Chaining Procedure with Textual Prompts to Establish Intraverbal Storytelling.

Science.gov (United States)

Valentino, Amber L; Conine, Daniel E; Delfs, Caitlin H; Furlow, Christopher M

2015-06-01

Echoic, tact, and textual transfer procedures have been proven successful in establishing simple intraverbals (Braam and Poling Applied Research in Mental Retardation, 4, 279-302, 1983; Luciano Applied Research in Mental Retardation, 102, 346-357, 1986; Watkins et al. The Analysis of Verbal Behavior, 7, 69-81, 1989). However, these strategies may be ineffective for some children due to the complexity of the targeted intraverbals. The current study investigated the use of a novel procedure which included a modified chaining procedure and textual prompts to establish intraverbal behavior in the form of telling short stories. Visual prompts and rule statements were used with some of the participants in order to produce the desired behavior change. Results indicated that the procedure was effective for teaching retelling of short stories in three children with autism.

El concepto de ficcionalidad: Teoría y representaciones textuales

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Álamo Felices, Francisco

2014-06-01

Full Text Available This article is an updated tour —scientific, terminological and bibliographical— of the concept of fictionality and its fundamental textual representations. The structure of this article is drawn from a prior state of the issue and moves on to a theoretical exposition of these fictional forms, to which a sampler of narrative examples applied to each of the analyzed narratives is added. All of this is complemented by recent contributions made within the field of fictionality by both literary critics and the novelists themselves.Este trabajo es un recorrido actualizado —científico, terminológico y bibliográfico— acerca del concepto de ficcionalidad y sus representaciones textuales fundamentales. La estructura del artículo se traza desde un estado previo de la cuestión para continuar con una exposición teórica de dichas modalidades ficcionales a lo que se añade un muestrario de ejemplos narrativos aplicados a cada caso analizado. Todo lo anterior se complementa con las últimas aportaciones que, en el campo de la ficcionalidad, han realizado tanto la crítica literaria como los propios novelistas.

Effects of Textual Enhancement and Input Enrichment on L2 Development

Science.gov (United States)

Rassaei, Ehsan

2015-01-01

Research on second language (L2) acquisition has recently sought to include formal instruction into second and foreign language classrooms in a more unobtrusive and implicit manner. Textual enhancement and input enrichment are two techniques which are aimed at drawing learners' attention to specific linguistic features in input and at the same…

Principles of Textual Communication. On the Basis of Polish Press Reports after President Obama’s 2009 Inauguration

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Piotr P. Chruszczewski

2009-11-01

Full Text Available On the basis of the assumption that any discourse is a highly context-dependent, and dynamically changing phenomenon of textual nature, and with reference to the fact that there may be used in linguistic research certain standards of textuality, the paper shows that the standards can be grouped into, e.g., three general sections (text-oriented, sender-oriented and context-oriented which can be used as a starting point for further research in the study of textlinguistics and journalistic discourse.

Revisão textual: para além da revisão linguística

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Sueli Maria Coelho

2010-07-01

Full Text Available Este artigo pretende reforçar a ideia de que a revisão textual deve extrapolar a simples correção de questões gramaticais e ortográficas nos textos. Para além dessas questões, observar parâmetros como o gênero e a textualidade no material a ser revisado, bem como se ele está adequado em relação a normas de publicação, discussão do tema e aspectos gráficos faz-se fundamental para uma boa revisão textual. Após discussões teóricas a respeito de aspectos globais do texto, tais como a noção de gêneros textuais/discursivos e a de textualidade, buscou-se mostrar, por meio da análise de três textos (um resumo acadêmico, uma notícia retirada de um sítio e uma piada como os aspectos aqui discutidos influenciam na tomada de decisões do revisor.Palavras-Chave: Revisão textual; Revisão linguística e temática; Revisão gráfica e normalizadora; Gêneros textuais/discursivos.

Exploration of Textual Interactions in CALL Learning Communities: Emerging Research and Opportunities

Science.gov (United States)

White, Jonathan R.

2017-01-01

Computer-assisted language learning (CALL) has greatly enhanced the realm of online social interaction and behavior. In language classrooms, it allows the opportunity for students to enhance their learning experiences. "Exploration of Textual Interactions in CALL Learning Communities: Emerging Research and Opportunities" is an ideal…

Predicting Learning-Related Emotions from Students' Textual Classroom Feedback via Twitter

Science.gov (United States)

Altrabsheh, Nabeela; Cocea, Mihaela; Fallahkhair, Sanaz

2015-01-01

Teachers/lecturers typically adapt their teaching to respond to students' emotions, e.g. provide more examples when they think the students are confused. While getting a feel of the students' emotions is easier in small settings, it is much more difficult in larger groups. In these larger settings textual feedback from students could provide…

A produção escrita de alunos com e sem síndrome de Down: uma análise da coerência textual The written production of students with and without Down syndrome: an analysis of textual coherence

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Adriana Leite Limaverde Gomes

2013-03-01

Full Text Available Neste trabalho, analisa-se a coerência textual a partir da reescrita do conto de Rapunzel. Baseia-se em uma abordagem psicogenética da língua escrita. Participaram desse estudo nove alunos, sendo seis com síndrome de Down (Grupo I e os outros três sem deficiência (Grupo II. Eles cursavam entre o 2º e 8º anos do Ensino Fundamental em escolas regulares. O procedimento de produção textual consistiu em um encontro individual, cuja solicitação de produção escrita era precedida pela leitura do conto pela pesquisadora. Os dados indicaram a presença da coerência textual nos dois grupos, embora mais frequente nas produções do grupo II, que demonstrava maior competência com os elementos de coerência textual. O grupo II apresentou estratégias poderosas para mobilizar os recursos cognitivos que permitiram articular conhecimentos anteriores e focalizá-los na produção e articulação de suas ideias no texto. O grupo I, na sua maioria, experimentava dificuldades em elaborar um desfecho em estreita relação com as partes que compunham o texto. Não apresentaram, porém, dificuldades em definir e manter a personagem principal ao longo de toda a história escrita, mesmo quando a história era incoerente se considerarmos outros indicadores. Qualitativamente, os textos dos alunos com síndrome de Down se diferenciaram daqueles produzidos pelo grupo II. Não identificamos, porém, características que podem representar especificidades na produção escrita dos alunos com essa síndrome, visto que alguns alunos com síndrome de Down produziram textos apresentando coerência.This work examines the textual coherence from the rewriting of the tale of Rapunzel. It is based on a psychogenetic approach of written language. Nine students participated in this study, six with Down syndrome (Group I and the other three without disabilities (Group II. They were enrolled between 2nd and 8th years of Primary Education in regular schools. The procedure of

Relational Data Modelling of Textual Corpora: The Skaldic Project and its Extensions

DEFF Research Database (Denmark)

Wills, Tarrin Jon

2015-01-01

Skaldic poetry is a highly complex textual phenomenon both in terms of the intricacy of the poetry and its contextual environment. Extensible Markup Language (XML) applications such as that of the Text Encoding Initiative provide a means of semantic representation of some of these complexities. XML...

Analyzing Student Performance and Attitudes toward Textual versus Iconic Programming Languages

Science.gov (United States)

Lin, Janet Mei-Chuen; Yang, Mei-Ching

2009-01-01

In this study half of 52 sixth graders learned to program in MSWLogo and the other half in Drape. An analysis of students' test scores revealed that Drape (an iconic language) seemed to have a steeper learning curve than MSWLogo (a textual language). However, as students gradually became more familiar with either language, the difference in…

Shifts in taxonomic and functional microbial diversity with agriculture: How fragile is the Brazilian Cerrado?

Science.gov (United States)

Souza, Renata Carolini; Mendes, Iêda Carvalho; Reis-Junior, Fábio Bueno; Carvalho, Fabíola Marques; Nogueira, Marco Antonio; Vasconcelos, Ana Tereza Ribeiro; Vicente, Vânia Aparecida; Hungria, Mariangela

2016-03-16

The Cerrado--an edaphic type of savannah--comprises the second largest biome of the Brazilian territory and is the main area for grain production in the country, but information about the impact of land conversion to agriculture on microbial diversity is still scarce. We used a shotgun metagenomic approach to compare undisturbed (native) soil and soils cropped for 23 years with soybean/maize under conservation tillage--"no-till" (NT)--and conventional tillage (CT) systems in the Cerrado biome. Soil management and fertilizer inputs with the introduction of agriculture improved chemical properties, but decreased soil macroporosity and microbial biomass of carbon and nitrogen. Principal coordinates analyses confirmed different taxonomic and functional profiles for each treatment. There was predominance of the Bacteria domain, especially the phylum Proteobacteria, with higher numbers of sequences in the NT and CT treatments; Archaea and Viruses also had lower numbers of sequences in the undisturbed soil. Within the Alphaproteobacteria, there was dominance of Rhizobiales and of the genus Bradyrhizobium in the NT and CT systems, attributed to massive inoculation of soybean, and also of Burkholderiales. In contrast, Rhizobium, Azospirillum, Xanthomonas, Pseudomonas and Acidobacterium predominated in the native Cerrado. More Eukaryota, especially of the phylum Ascomycota were detected in the NT. The functional analysis revealed lower numbers of sequences in the five dominant categories for the CT system, whereas the undisturbed Cerrado presented higher abundance. High impact of agriculture in taxonomic and functional microbial diversity in the biome Cerrado was confirmed. Functional diversity was not necessarily associated with taxonomic diversity, as the less conservationist treatment (CT) presented increased taxonomic sequences and reduced functional profiles, indicating a strategy to try to maintain soil functioning by favoring taxa that are probably not the most

A Linguistic Approach to Identify the Affective Dimension Expressed in Textual Messages

Science.gov (United States)

Rigo, Sandro José; da Rosa Alves, Isa Mara; Victória Barbosa, Jorge Luis

2015-01-01

The digital mediation resources used in Distance Education can hinder the teacher's perception about the student's state of mind. However, the textual expression in natural language is widely encouraged in most Distance Education courses, through the use of Virtual Learning Environments and other digital tools. This fact has motivated research…

Comparing the temporal dynamics of thematic and taxonomic processing using event-related potentials.

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Olivera Savic

Full Text Available We report the results of a study comparing the temporal dynamics of thematic and taxonomic knowledge activation in a picture-word priming paradigm using event-related potentials. Although we found no behavioral differences between thematic and taxonomic processing, ERP data revealed distinct patterns of N400 and P600 amplitude modulation for thematic and taxonomic priming. Thematically related target stimuli elicited less negativity than taxonomic targets between 280-460 ms after stimulus onset, suggesting easier semantic processing of thematic than taxonomic relationships. Moreover, P600 mean amplitude was significantly increased for taxonomic targets between 520-600 ms, consistent with a greater need for stimulus reevaluation in that condition. These results offer novel evidence in favor of a dissociation between thematic and taxonomic thinking in the early phases of conceptual evaluation.

Comparing the temporal dynamics of thematic and taxonomic processing using event-related potentials.

Science.gov (United States)

Savic, Olivera; Savic, Andrej M; Kovic, Vanja

2017-01-01

We report the results of a study comparing the temporal dynamics of thematic and taxonomic knowledge activation in a picture-word priming paradigm using event-related potentials. Although we found no behavioral differences between thematic and taxonomic processing, ERP data revealed distinct patterns of N400 and P600 amplitude modulation for thematic and taxonomic priming. Thematically related target stimuli elicited less negativity than taxonomic targets between 280-460 ms after stimulus onset, suggesting easier semantic processing of thematic than taxonomic relationships. Moreover, P600 mean amplitude was significantly increased for taxonomic targets between 520-600 ms, consistent with a greater need for stimulus reevaluation in that condition. These results offer novel evidence in favor of a dissociation between thematic and taxonomic thinking in the early phases of conceptual evaluation.

Taxonomic revision of Pachyptera (Bignonieae, Bignoniaceae

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Jessica Nayara Carvalho Francisco

2018-01-01

Full Text Available Pachyptera DC. is a small genus of neotropical lianas included in tribe Bignonieae (Bignoniaceae. The genus has a complicated taxonomic history but currently includes species distributed from Belize to Southern Amazon. Pachyptera is characterised by four main synapomorphies, namely, a papery peeling bark, prophylls of the axillary buds organised in a series of three, patelliform glands arranged in lines in the upper portions of the calyx and corolla tube. Furthermore, members of the genus also have stems with four phloem wedges in cross-section and conspicuous extrafloral nectaries between the interpetiolar region and at the petiole apex, although these characters are also shared with other genera of tribe Bignonieae. Here, we present a taxonomic revision of Pachyptera, which includes a complete list of synonyms, detailed morphological descriptions of species and an identification key, as well as information on the habitat, distribution and phenology, nomenclatural notes, taxonomic comments and illustrations of all the species. In addition, we designate three lectotypes, propose one new combination, raise one variety to species status and describe a new species. After these adjustments, a Pachyptera with five well-defined species is recognised.

Taxonomic revision of Pachyptera (Bignonieae, Bignoniaceae).

Science.gov (United States)

Francisco, Jessica Nayara Carvalho; Lohmann, Lúcia G

2018-01-01

Pachyptera DC. is a small genus of neotropical lianas included in tribe Bignonieae (Bignoniaceae). The genus has a complicated taxonomic history but currently includes species distributed from Belize to Southern Amazon. Pachyptera is characterised by four main synapomorphies, namely, a papery peeling bark, prophylls of the axillary buds organised in a series of three, patelliform glands arranged in lines in the upper portions of the calyx and corolla tube. Furthermore, members of the genus also have stems with four phloem wedges in cross-section and conspicuous extrafloral nectaries between the interpetiolar region and at the petiole apex, although these characters are also shared with other genera of tribe Bignonieae. Here, we present a taxonomic revision of Pachyptera , which includes a complete list of synonyms, detailed morphological descriptions of species and an identification key, as well as information on the habitat, distribution and phenology, nomenclatural notes, taxonomic comments and illustrations of all the species. In addition, we designate three lectotypes, propose one new combination, raise one variety to species status and describe a new species. After these adjustments, a Pachyptera with five well-defined species is recognised.

A Didatic Reflection on Distribution of Textual Genres to the Primary School

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João Bosco Figueiredo-Gomes

2015-12-01

Full Text Available Considering the interest on the studies about textual genre and its teaching in the three last decades, the present article presents a report of an analysis of collection of didactic books of Portuguese language of the Primary School II, which aimed at verifying if the didactic book enables a comprehension about different textual genres as for the student, in relation to the context and social use, as well as for the teacher, in relation to parameters in order to do an analysis and choice of didactic collection books. The theoretical methodological framework based mainly in the contributions of Interactionism Socio-discursive: Bronckart (1999, 2003 and Schneuwly and Dolz (2004; in the studies by Marcuschi (2002, 2008 and in the orientations about the teaching of mother language contained in the National Curriculum Guidelines – PCN (BRASIL, 1998. The results provided a reflection that offers param-eters to the analysis, choice and organization of didactic collections, as well as suggestions of pedagogic implementation towards the teaching of Portuguese language.

Classifying unstructed textual data using the Product Score Model: an alternative text mining algorithm

NARCIS (Netherlands)

He, Qiwei; Veldkamp, Bernard P.; Eggen, T.J.H.M.; Veldkamp, B.P.

2012-01-01

Unstructured textual data such as students’ essays and life narratives can provide helpful information in educational and psychological measurement, but often contain irregularities and ambiguities, which creates difficulties in analysis. Text mining techniques that seek to extract useful

Computer-Assisted Search Of Large Textual Data Bases

Science.gov (United States)

Driscoll, James R.

1995-01-01

"QA" denotes high-speed computer system for searching diverse collections of documents including (but not limited to) technical reference manuals, legal documents, medical documents, news releases, and patents. Incorporates previously available and emerging information-retrieval technology to help user intelligently and rapidly locate information found in large textual data bases. Technology includes provision for inquiries in natural language; statistical ranking of retrieved information; artificial-intelligence implementation of semantics, in which "surface level" knowledge found in text used to improve ranking of retrieved information; and relevance feedback, in which user's judgements of relevance of some retrieved documents used automatically to modify search for further information.

Methodology to build medical ontology from textual resources.

Science.gov (United States)

Baneyx, Audrey; Charlet, Jean; Jaulent, Marie-Christine

2006-01-01

In the medical field, it is now established that the maintenance of unambiguous thesauri goes through ontologies. Our research task is to help pneumologists code acts and diagnoses with a software that represents medical knowledge through a domain ontology. In this paper, we describe our general methodology aimed at knowledge engineers in order to build various types of medical ontologies based on terminology extraction from texts. The hypothesis is to apply natural language processing tools to textual patient discharge summaries to develop the resources needed to build an ontology in pneumology. Results indicate that the joint use of distributional analysis and lexico-syntactic patterns performed satisfactorily for building such ontologies.

Textual Data Mining Applications in the Service Chain Knowledge Management of e-Government

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Jalal Rezaeenour

2017-03-01

Full Text Available Systems related to knowledge management can improve quality and efficiency of knowledge used for decision making process. Approximately 80 percent of corporate information are in textual data formats. That is why text mining is useful and important in service chain knowledge management. For example, one of the most important applications of text mining is in managing on-line source of digital documents and the analysis of internal documents. This research is based on text-based documents and textual information and interviews processed by Grounded theory. In this research clustering techniques were applied at first step. In the second step, Apriori association rules techniques for discovering and extracting the most useful association rules were applied. In other words, integration of datamining techniques was emphasized to improve the accuracy and precision of classification. Using decision tree technique for classification may result in reducing classification precision. But, the proposed method showed a significant improvement in classification precision.

Use of a Modified Chaining Procedure with Textual Prompts to Establish Intraverbal Storytelling

Science.gov (United States)

Valentino, Amber L.; Conine, Daniel E.; Delfs, Caitlin H.; Furlow, Christopher M.

2015-01-01

Echoic, tact, and textual transfer procedures have been proven successful in establishing simple intraverbals (Braam and Poling "Applied Research in Mental Retardation," 4, 279-302, 1983; Luciano "Applied Research in Mental Retardation," 102, 346-357, 1986; Watkins et al. "The Analysis of Verbal Behavior," 7, 69-81,…

Perceptions and Beliefs about Textual Appropriation and Source Use in Second Language Writing

Science.gov (United States)

Polio, Charlene; Shi, Ling

2012-01-01

Perceptions and judgments on plagiarism or acceptable use of source texts are contingent on one's interpretations and experiences in reading and writing academic texts in a specific disciplinary context. The lack of consensus on what is acceptable textual appropriation in student writing has led to the scholarship on perceptions of textual…

Arguing in L2: Discourse Structure and Textual Metadiscourse in Philippine Newspaper Editorials

Science.gov (United States)

Tarrayo, Veronico N.; Duque, Marie Claire T.

2011-01-01

This study described the discourse structure and textual metadiscourse in newspaper editorials in the Philippines where English is used as a second language or L2. Specifically, it sought answers to the following questions: (1) What discourse features characterize the structure of the following parts of Philippine newspaper editorials--orientation…

Textual and shape-based feature extraction and neuro-fuzzy classifier for nuclear track recognition

Science.gov (United States)

Khayat, Omid; Afarideh, Hossein

2013-04-01

Track counting algorithms as one of the fundamental principles of nuclear science have been emphasized in the recent years. Accurate measurement of nuclear tracks on solid-state nuclear track detectors is the aim of track counting systems. Commonly track counting systems comprise a hardware system for the task of imaging and software for analysing the track images. In this paper, a track recognition algorithm based on 12 defined textual and shape-based features and a neuro-fuzzy classifier is proposed. Features are defined so as to discern the tracks from the background and small objects. Then, according to the defined features, tracks are detected using a trained neuro-fuzzy system. Features and the classifier are finally validated via 100 Alpha track images and 40 training samples. It is shown that principle textual and shape-based features concomitantly yield a high rate of track detection compared with the single-feature based methods.

A New Framework for Textual Information Mining over Parse Trees. CRESST Report 805

Science.gov (United States)

Mousavi, Hamid; Kerr, Deirdre; Iseli, Markus R.

2011-01-01

Textual information mining is a challenging problem that has resulted in the creation of many different rule-based linguistic query languages. However, these languages generally are not optimized for the purpose of text mining. In other words, they usually consider queries as individuals and only return raw results for each query. Moreover they…

The Text's the Thing: Using (Neglected) Issues of Textual Scholarship to Help Students Reimagine Shakespeare

Science.gov (United States)

Parsons, Scott

2009-01-01

Do individuals know what words Shakespeare actually wrote? Exploring these issues can yield dramatic interest. With references to Shakespeare's Quartos and Folios, the author examines key textual issues and discrepancies in classroom studies of "Hamlet." (Contains 8 notes.)

How Well Do Student Nurses Write Case Studies? A Cohesion-Centered Textual Complexity Analysis

NARCIS (Netherlands)

Dascalu, Mihai; Dessus, Philippe; Thuez, Laurent; Trausan-Matu, Stefan

2017-01-01

Starting from the presumption that writing style is proven to be a reliable predictor of comprehension, this paper investigates the extent to which textual complexity features of nurse students’ essays are related to the scores they were given. Thus, forty essays about case studies on infectious

Antiabecedarian Desires: Odd Narratology and Digital Textuality

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Asunción López-Varela Azcárate

2014-05-01

Full Text Available Los sistemas de escritura rompen barreras temporales y permiten compartir conocimiento y preservarlo. Como si fuesen organismos vivos, las estructuras narratológicas que conforman la comunicación textual crecen a partir de principios de orden y formas de codificación cuyas raíces retroceden hasta un proto-alfabeto de origen semítico. Sin embargo, la historia literaria incluye muchos ejemplos que, cual virus, han buscado quebrantar el cuerpo de la textualidad alfabética. Este ensayo estudia tres artistas fundamentales, James Joyce, Jorge Luis Borges,William Burroughs, junto con varias obras contemporáneas de literatura electrónica. Todos ellos ponen en cuestión los principios organizativos alfabéticos y anticipan el debate sobre la importancia o no de las estructuras lineales en los sistemas de representación.

Integrating DNA barcode data and taxonomic practice: determination, discovery, and description.

Science.gov (United States)

Goldstein, Paul Z; DeSalle, Rob

2011-02-01

DNA barcodes, like traditional sources of taxonomic information, are potentially powerful heuristics in the identification of described species but require mindful analytical interpretation. The role of DNA barcoding in generating hypotheses of new taxa in need of formal taxonomic treatment is discussed, and it is emphasized that the recursive process of character evaluation is both necessary and best served by understanding the empirical mechanics of the discovery process. These undertakings carry enormous ramifications not only for the translation of DNA sequence data into taxonomic information but also for our comprehension of the magnitude of species diversity and its disappearance. This paper examines the potential strengths and pitfalls of integrating DNA sequence data, specifically in the form of DNA barcodes as they are currently generated and analyzed, with taxonomic practice.

An ecosystem approach to assess soil quality in organically and conventionally managed farms in Iceland and Austria

Science.gov (United States)

van Leeuwen, J. P.; Lehtinen, T.; Lair, G. J.; Bloem, J.; Hemerik, L.; Ragnarsdóttir, K. V.; Gísladóttir, G.; Newton, J. S.; de Ruiter, P. C.

2015-01-01

Intensive agricultural production can be an important driver for the loss of long-term soil quality. For this reason, the European Critical Zone Observatory (CZO) network adopted four pairs of agricultural CZO sites that differ in their management: conventional or organic. The CZO sites include two pairs of grassland farms in Iceland and two pairs of arable farms in Austria. Conventional fields differed from the organic fields in the use of artificial fertilisers and pesticides. Soils of these eight farms were analysed in terms of their physical, chemical, and biological properties, including soil aggregate size distribution, soil organic matter contents, abundance of soil microbes and soil fauna, and taxonomic diversity of soil microarthropods. In Icelandic grasslands, organically farmed soils had larger mean weight diameters of soil aggregates than the conventional farms, while there were no differences on the Austrian farms. Organic farming did not systematically influence organic matter contents or composition, nor soil carbon and nitrogen contents. Also, soil food web structures, in terms of presence of trophic groups of soil organisms, were highly similar among all farms, indicating a low sensitivity of trophic structure to land use or climate. However, soil organism biomass, especially of bacteria and nematodes, was consistently higher on organic farms than on conventional farms. Within the microarthropods, taxonomic diversity was systematically higher in the organic farms compared to the conventional farms. This difference was found across countries and farm, crop, and soil types. The results do not show systematic differences in physical and chemical properties between organic and conventional farms, but confirm that organic farming can enhance soil biomass and that microarthropod diversity is a sensitive and consistent indicator for land management.

A computational framework for converting textual clinical diagnostic criteria into the quality data model.

Science.gov (United States)

Hong, Na; Li, Dingcheng; Yu, Yue; Xiu, Qiongying; Liu, Hongfang; Jiang, Guoqian

2016-10-01

Constructing standard and computable clinical diagnostic criteria is an important but challenging research field in the clinical informatics community. The Quality Data Model (QDM) is emerging as a promising information model for standardizing clinical diagnostic criteria. To develop and evaluate automated methods for converting textual clinical diagnostic criteria in a structured format using QDM. We used a clinical Natural Language Processing (NLP) tool known as cTAKES to detect sentences and annotate events in diagnostic criteria. We developed a rule-based approach for assigning the QDM datatype(s) to an individual criterion, whereas we invoked a machine learning algorithm based on the Conditional Random Fields (CRFs) for annotating attributes belonging to each particular QDM datatype. We manually developed an annotated corpus as the gold standard and used standard measures (precision, recall and f-measure) for the performance evaluation. We harvested 267 individual criteria with the datatypes of Symptom and Laboratory Test from 63 textual diagnostic criteria. We manually annotated attributes and values in 142 individual Laboratory Test criteria. The average performance of our rule-based approach was 0.84 of precision, 0.86 of recall, and 0.85 of f-measure; the performance of CRFs-based classification was 0.95 of precision, 0.88 of recall and 0.91 of f-measure. We also implemented a web-based tool that automatically translates textual Laboratory Test criteria into the QDM XML template format. The results indicated that our approaches leveraging cTAKES and CRFs are effective in facilitating diagnostic criteria annotation and classification. Our NLP-based computational framework is a feasible and useful solution in developing diagnostic criteria representation and computerization. Copyright © 2016 Elsevier Inc. All rights reserved.

Sharing information books with kindergartners: The role of parents’ extra-textual talk and socioeconomic status

NARCIS (Netherlands)

Mol, S.E.; Neuman, S.B.

2014-01-01

The purpose of the study was to explore how features of parent-child extra-textual talk during information book-sharing might vary across different socioeconomic backgrounds, and to determine if certain interactional patterns might mediate their effects on children's receptive and expressive

FANTOM: Functional and taxonomic analysis of metagenomes

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Sanli Kemal

2013-02-01

Full Text Available Abstract Background Interpretation of quantitative metagenomics data is important for our understanding of ecosystem functioning and assessing differences between various environmental samples. There is a need for an easy to use tool to explore the often complex metagenomics data in taxonomic and functional context. Results Here we introduce FANTOM, a tool that allows for exploratory and comparative analysis of metagenomics abundance data integrated with metadata information and biological databases. Importantly, FANTOM can make use of any hierarchical database and it comes supplied with NCBI taxonomic hierarchies as well as KEGG Orthology, COG, PFAM and TIGRFAM databases. Conclusions The software is implemented in Python, is platform independent, and is available at http://www.sysbio.se/Fantom.

Comprensión y Producción Textual Narrativa en Estudiantes de Educación Primaria

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LEIDY TATIANA GUZMÁN TORRES

2015-01-01

Full Text Available Por medio de un enfoque mixto, se caracterizó la comprensión y producción textual narrativa en estudiantes de educación primaria (primero y segundo grado, así como aspectos psicosociales (valor social de la lectura y hábito lector y contextuales (interacciones cognitivas y afectivas docente-niños en docentes de educación primaria de tres instituciones educativas. Se encontró que los estudiantes tuvieron un desempeño medio alto en producción textual y comprensión literal, y bajo en comprensión inferencial. Además, se observó que la mayoría de las docentes son lectoras ocasionales, emplean interacciones cognitivas unidireccionales, ofrecen un mediano apoyo emocional a sus estudiantes y valoran la lectura como una herramienta instrumental y lúdica.

The Ubiquity of Humanity and Textuality in Human Experience

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Daihyun Chung

2015-11-01

Full Text Available The so-called “crisis of the humanities” can be understood in terms of an asymmetry between the natural and social sciences on the one hand and the humanities on the other. While the sciences approach topics related to human experience in quantificational or experimental terms, the humanities turn to ancient, canonical, and other texts in the search for truths about human experience. As each approach has its own unique limitations, it is desirable to overcome or remove the asymmetry between them. The present article seeks to do just that by advancing and defending the following two claims: (a that humanity is ubiquitous wherever language is used; and (b that anything that can be experienced by humans is in need of an interpretation. Two arguments are presented in support of these claims. The first argument concerns the nature of questions, which are one of the fundamental marks or manifestations of human language. All questions are ultimately attempts to find meanings or interpretations of what is presented. As such, in questioning phenomena, one seeks to transcend the negative space or oppression of imposed structures; in doing so, one reveals one’s humanity. Second, all phenomena are textual in nature: that which astrophysicists find in distant galaxies or which cognitive neuroscientists find in the structures of the human brain are no less in need of interpretation than the dialogues of Plato or the poems of Homer. Texts are ubiquitous. The implications of these two arguments are identified and discussed in this article. In particular, it is argued that the ubiquity of humanity and textuality points to a view of human nature that is neither individualistic nor collectivist but rather integrational in suggesting that the realization of oneself is inseparable from the realization of others.

Textual Transformations in Contemporary Black Writing in Britain

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Jawhar Ahmed Dhouib

2014-04-01

Full Text Available While the first wave of Caribbean immigrant writers brilliantly explored race-related issues, black Britons like Andrea Levy, Zadie Smith and Caryl Phillips, among others, have sought to depart from earlier fiction, motivated in their project by the changing white face of Britain. In this article, I would like to argue that cultural change in Britain has deeply influenced literary production and has, consequently, laid the ground for a series of textual transformations. To capture instances of creative excess in contemporary black writing in Britain, I will bring under examination Caryl Phillips’s (2009 novel In the Falling Snow. My intention is to show to what extent Phillips’s work surpasses the ‘noose of race’ and already-familiar representations of multicultural Britain to celebrate a ‘post-racial’ society.

Global hotspots and correlates of alien species richness across taxonomic groups

Science.gov (United States)

Dawson, Wayne; Moser, Dietmar; van Kleunen, Mark; Kreft, Holger; Pergl, Jan; Pysek, Petr; Weigelt, Patrick; Winter, Marten; Lenzner, Bernd; Blackburn, Tim M.; Dyer, Ellie; Cassey, Phillip; Scrivens, Sally-Louise; Economo, Evan P.; Guenard, Benoit; Capinha, Cesar; Seebens, Hanno; Garcia-Diaz, Pablo; Nentwig, Wolfgang; Garcia-Berthou, Emili; Casal, Christine; Mandrak, Nicholas E.; Fuller, Pam; Meyer, Carsten; Essl, Franz

2017-01-01

Human-mediated transport beyond biogeographic barriers has led to the introduction and establishment of alien species in new regions worldwide. However, we lack a global picture of established alien species richness for multiple taxonomic groups. Here, we assess global patterns and potential drivers of established alien species richness across eight taxonomic groups (amphibians, ants, birds, freshwater fishes, mammals, vascular plants, reptiles and spiders) for 186 islands and 423 mainland regions. Hotspots of established alien species richness are predominantly island and coastal mainland regions. Regions with greater gross domestic product per capita, human population density, and area have higher established alien richness, with strongest effects emerging for islands. Ants and reptiles, birds and mammals, and vascular plants and spiders form pairs of taxonomic groups with the highest spatial congruence in established alien richness, but drivers explaining richness differ between the taxa in each pair. Across all taxonomic groups, our results highlight the need to prioritize prevention of further alien species introductions to island and coastal mainland regions globally.

Making sense of "alternative", "complementary", "unconventional" and "integrative" medicine: exploring the terms and meanings through a textual analysis.

Science.gov (United States)

Ng, Jeremy Y; Boon, Heather S; Thompson, Alison K; Whitehead, Cynthia R

2016-05-20

Medical pluralism has flourished throughout the Western world in spite of efforts to legitimize Western biomedical healthcare as "conventional medicine" and thereby relegate all non-physician-related forms of healthcare to an "other" category. These "other" practitioners have been referred to as "unconventional", "alternative" and "complementary", among other terms throughout the past half century. This study investigates the discourses surrounding the changes in the terms, and their meanings, used to describe unconventional medicine in North America. Terms identified by the literature as synonymous to unconventional medicine were searched using the Scopus database. A textual analysis following the method described by Kripendorff 2013 was subsequently performed on the five most highly-cited unconventional medicine-related peer-reviewed literature published between 1970 and 2013. Five commonly-used, unconventional medicine-related terms were identified. Authors using "complementary and alternative", "complementary", "alternative", or "unconventional" tended to define them by what they are not (e.g., therapies not taught/used in conventional medicine, therapy demands not met by conventional medicine, and therapies that lack research on safety, efficacy and effectiveness). Authors defined "integrated/integrative" medicine by what it is (e.g., a new model of healthcare, the combining of both conventional and unconventional therapies, accounting for the whole person, and preventative maintenance of health). Authors who defined terms by "what is not" stressed that the purpose of conducting research in this area was solely to create knowledge. Comparatively, authors who defined terms by "what is" sought to advocate for the evidence-based combination of unconventional and conventional medicines. Both author groups used scientific rhetoric to define unconventional medical practices. This emergence of two groups of authors who used two different sets of terms to refer to the

As funções dos tipos textuais no interior do gênero discurso de propaganda The functions of the textual types in the gender advertising speech

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Waldivia Maria de Jesus

2010-01-01

Full Text Available Este artigo propõe refletir acerca do ensino de leitura e escrita pela abordagem de gêneros, com foco nas funções que os tipos textuais desempenham no interior do gênero discurso de propaganda. Reflete-se sobre problemas que envolvem a conceitualização de gênero textual / gênero de discurso, tipos textuais / formas textuais, com ênfase na definição de gênero mais adequada ao ensino. O corpus desses estudos constitui-se de uma peça publicitária veiculada no jornal Folha de S. Paulo. E as reflexões se ancoram no Funcionalismo (HALLIDAY, 1985, na Semântica Pragmática (VAN DIJK, 1978 e na Análise do Discurso (MAINGUENEAU, 2002.This article proposes a reflection about the teaching of reading and writing on the genre approach, focusing on the function that textual types play within the genre advertising discourse. It reflects on issues surrounding the conceptualization of textual genre / discourse genre, textual types / textual forms, observing the most appropriate definition of genre to teach mother language. The studied corpus is constituted by an advertising piece published in Folha de S. Paulo. And the reflections rest on the Functionalism (HALLIDAY, 1985, on the Semantic Pragmatic (VAN DIJK, 1979, on the Discourse Analysis (MAINGUENEAU, 2002.

Towards a textual history of La Galatea

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Juan Montero

2010-12-01

Full Text Available Studying the different printings and editions of La Galatea allows one to establish the work’s textual history. The present study seeks to accomplish this, following this pattern: a the princeps of 1585; b early printings from 1590-1618 and from the book’s editorial resurgence from 1736-1846; c the editions from 1863 until today and the foundations of a critical edition. The following conclusions are proposed: a the princeps is the closest text to the author’s intention, but contains errors that any editor should identify and correct, if possible; b the editions that date from 1590-1846 include useful readings in that endeavor; c modern editions of La Galatea have erred in general in an exaggerated fidelity to the princeps, with the exception of the one by C. Rosell in 1863, in which other printings were taken into account and the text was emended, even excessively.

ColorPhylo: A Color Code to Accurately Display Taxonomic Classifications.

Science.gov (United States)

Lespinats, Sylvain; Fertil, Bernard

2011-01-01

Color may be very useful to visualise complex data. As far as taxonomy is concerned, color may help observing various species' characteristics in correlation with classification. However, choosing the number of subclasses to display is often a complex task: on the one hand, assigning a limited number of colors to taxa of interest hides the structure imbedded in the subtrees of the taxonomy; on the other hand, differentiating a high number of taxa by giving them specific colors, without considering the underlying taxonomy, may lead to unreadable results since relationships between displayed taxa would not be supported by the color code. In the present paper, an automatic color coding scheme is proposed to visualise the levels of taxonomic relationships displayed as overlay on any kind of data plot. To achieve this goal, a dimensionality reduction method allows displaying taxonomic "distances" onto a Euclidean two-dimensional space. The resulting map is projected onto a 2D color space (the Hue, Saturation, Brightness colorimetric space with brightness set to 1). Proximity in the taxonomic classification corresponds to proximity on the map and is therefore materialised by color proximity. As a result, each species is related to a color code showing its position in the taxonomic tree. The so called ColorPhylo displays taxonomic relationships intuitively and can be combined with any biological result. A Matlab version of ColorPhylo is available at http://sy.lespi.free.fr/ColorPhylo-homepage.html. Meanwhile, an ad-hoc distance in case of taxonomy with unknown edge lengths is proposed.

Taxonomic formula of geoecological hazard for the cadastral districts of Moscow city

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Karfidova E.A.

2018-01-01

Full Text Available the article proposes a method for calculating the taxonomic formula for the geoecological hazard of the cadastral district. The engineering-geological zoning map uses for calculating the balance of the territory by the hazard index – the basis of the taxonomic formula. The taxonomic formula as an open data set makes it possible to characterize the geoecological hazards of the territory of a district. The geoenvironmental hazard map of cadastral districts is necessary for regional model of spatial planning at the municipal level.

Analyses of the stability and core taxonomic memberships of the human microbiome.

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Kelvin Li

Full Text Available Analyses of the taxonomic diversity associated with the human microbiome continue to be an area of great importance. The study of the nature and extent of the commonly shared taxa ("core", versus those less prevalent, establishes a baseline for comparing healthy and diseased groups by quantifying the variation among people, across body habitats and over time. The National Institutes of Health (NIH sponsored Human Microbiome Project (HMP has provided an unprecedented opportunity to examine and better define what constitutes the taxonomic core within and across body habitats and individuals through pyrosequencing-based profiling of 16S rRNA gene sequences from oral, skin, distal gut (stool, and vaginal body habitats from over 200 healthy individuals. A two-parameter model is introduced to quantitatively identify the core taxonomic members of each body habitat's microbiota across the healthy cohort. Using only cutoffs for taxonomic ubiquity and abundance, core taxonomic members were identified for each of the 18 body habitats and also for the 4 higher-level body regions. Although many microbes were shared at low abundance, they exhibited a relatively continuous spread in both their abundance and ubiquity, as opposed to a more discretized separation. The numbers of core taxa members in the body regions are comparatively small and stable, reflecting the relatively high, but conserved, interpersonal variability within the cohort. Core sizes increased across the body regions in the order of: vagina, skin, stool, and oral cavity. A number of "minor" oral taxonomic core were also identified by their majority presence across the cohort, but with relatively low and stable abundances. A method for quantifying the difference between two cohorts was introduced and applied to samples collected on a second visit, revealing that over time, the oral, skin, and stool body regions tended to be more transient in their taxonomic structure than the vaginal body region.

Fast and accurate taxonomic assignments of metagenomic sequences using MetaBin.

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Vineet K Sharma

Full Text Available Taxonomic assignment of sequence reads is a challenging task in metagenomic data analysis, for which the present methods mainly use either composition- or homology-based approaches. Though the homology-based methods are more sensitive and accurate, they suffer primarily due to the time needed to generate the Blast alignments. We developed the MetaBin program and web server for better homology-based taxonomic assignments using an ORF-based approach. By implementing Blat as the faster alignment method in place of Blastx, the analysis time has been reduced by severalfold. It is benchmarked using both simulated and real metagenomic datasets, and can be used for both single and paired-end sequence reads of varying lengths (≥45 bp. To our knowledge, MetaBin is the only available program that can be used for the taxonomic binning of short reads (<100 bp with high accuracy and high sensitivity using a homology-based approach. The MetaBin web server can be used to carry out the taxonomic analysis, by either submitting reads or Blastx output. It provides several options including construction of taxonomic trees, creation of a composition chart, functional analysis using COGs, and comparative analysis of multiple metagenomic datasets. MetaBin web server and a standalone version for high-throughput analysis are available freely at http://metabin.riken.jp/.

Avibase – a database system for managing and organizing taxonomic concepts

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Denis Lepage

2014-06-01

Full Text Available Scientific names of biological entities offer an imperfect resolution of the concepts that they are intended to represent. Often they are labels applied to entities ranging from entire populations to individual specimens representing those populations, even though such names only unambiguously identify the type specimen to which they were originally attached. Thus the real-life referents of names are constantly changing as biological circumscriptions are redefined and thereby alter the sets of individuals bearing those names. This problem is compounded by other characteristics of names that make them ambiguous identifiers of biological concepts, including emendations, homonymy and synonymy. Taxonomic concepts have been proposed as a way to address issues related to scientific names, but they have yet to receive broad recognition or implementation. Some efforts have been made towards building systems that address these issues by cataloguing and organizing taxonomic concepts, but most are still in conceptual or proof-of-concept stage. We present the on-line database Avibase as one possible approach to organizing taxonomic concepts. Avibase has been successfully used to describe and organize 844,000 species-level and 705,000 subspecies-level taxonomic concepts across every major bird taxonomic checklist of the last 125 years. The use of taxonomic concepts in place of scientific names, coupled with efficient resolution services, is a major step toward addressing some of the main deficiencies in the current practices of scientific name dissemination and use.

Cocuyo: Una Matriz de identidad y su despliegue en submunrlos textuales

OpenAIRE

Cristián Montes

2016-01-01

El presente artículo intenta actualizar una lectura coherente de la novela Cocuyo. Para esto, se ha trabajado con la idea de matriz propuesta por Michael Riffatene, y de mundo posible de Tomás Albaladejo Mayordomo. Ambas teorías permiten dar cuenta del problema de la identidad desde ángulos complementarios y a partir del motivo del viaje. De este modo puede apreciarse que la matríz propuesta es desplegada en los diversos submundos textuales los cuales, a su vez, develan la imagen de mundo y d...

SECRETARIAT AND TEXTUAL PRODUCTION: ARGUMENTATION IN THE TEXTUAL GENRE LETTER OF DECLARATION O SECRETARIADO E A PRODUÇÃO TEXTUAL: A ARGUMENTAÇÃO NO GÊNERO DECLARAÇÃO

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Erivaldo Pereira do Nascimento

2012-05-01

Full Text Available

This article aims at describing the semantic argumentative structure of the textual/discursive genre Letter of Declaration, one of the documents with which the executive secretary frequently deals. This investigation is based on the Argumention Theory in the Language proposed by Ducrot (1988,1987. We also used the studies about Discursive Modalization proposed by Koch (2002, Castilho e Castilho (1993, Nascimento (2005, among others. Modalization is considered here as a semantic argumentative strategy, as it enables the speaker to make a statement or to express a point of view about the content of his/her enunciation, according to the interlocution. This study about the previously mentioned gender is qualitative, quantitative and descriptive. The corpus used is composed of 20 (twenty Letters of Declaration issued by different organizations or private and public institutions. We perceived that in the Letters of Declaration analysed argumentation is achieved by the use of modalizers and argumentative operators, used by the speaker to produce different effects of meaning in the texts.

Este artigo tem como objetivo descrever a estrutura semântico-argumentativa do gênero textual/discursivo declaração, um dos documentos com o qual o profissional de Secretariado lida frequentemente. Essa investigação tem como base a Teoria da Argumentação na Língua, proposta por Ducrot (1988, 1987. Utilizamos também os estudos de Modalização Discursiva, proposta por Koch (2002, Castilho e Castilho (1993, Nascimento (2005, entre outros. A modalização é aqui considerada como uma estratégia semântico-argumentativa, uma vez que permite ao locutor imprimir uma avaliação ou ponto de vista sobre o conteúdo de seu enunciado, em função da interlocução. A investigação realizada a respeito do referido gênero é de natureza qualitativa e quantitativa, de cunho descritivo, e o corpus utilizado é constituído por 20

Partitioning taxonomic diversity of aquatic insect assemblages ...

Science.gov (United States)

Biological diversity can be divided into: alpha (α, local), beta (β, difference in assemblage composition among locals), and gamma (γ, total diversity). We assessed the partitioning of taxonomic diversity of Ephemeroptera, Plecoptera and Trichoptera (EPT) and of functional feeding groups (FFG) in Neotropical Savanna (southeastern Brazilian Cerrado) streams. To do so, we considered three diversity components: stream site (α), among stream sites (β1), and among hydrologic units (β2). We also evaluated the association of EPT genera composition with heterogeneity in land use, instream physical habitat structure, and instream water quality variables. The percent of EPT taxonomic α diversity (20.7%) was lower than the β1 and β2 diversities (53.1% and 26.2%, respectively). The EPT FFG α diversity (26.5%) was lower than the β1 diversity (55.8%) and higher than the β2 (17.7%) diversity. The collector-gatherer FFG was predominant and had the greatest β diversity among stream sites (β1, 55.8%). Our findings support the need for implementing regional scale conservation strategies in the Cerrado biome, which has been degraded by anthropogenic activities. Using adaptations of the US EPA’s National Aquatic Resource Survey (NARS) designs and methods, Ferreira and colleagues examined the distribution of taxonomic and functional diversity of aquatic insects among basins, stream sites within basins, and within stream sample reaches. They sampled 160 low-order stre

Exploring the Textual Metafunction in a Biblical-Fictional Parable in Ngũgĩ wa Thiong’o’s Devil on the Cross

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Yémalo C. Amoussou

2016-09-01

Full Text Available This paper explores the textual metafunctional patterns in two fictional versions of a Biblical Parable in Ngũgĩ wa Thiong’o’s novel Devil on the Cross (1982 in order to find the similarities and differences between their compositional features. It critically draws on the theory of systemic functional linguistics expounded by specialists like Halliday (1994, Halliday and Matthiessen (2004 and Eggins (2004 to overview the theoretical background to the study, with focus on the grammar of textual meaning, proposes a new Theme classification and uses it to analyze the Thematic structure and taxis system of the two extracts. The researcher has come to the conclusion that, though they are initially spoken, these texts show such interesting textual-meaning properties as the density of ellipsis, of circumstantial and interpersonal thematization, of taxis and rank shift that they should be qualified to belong to both spoken and written mode of discourse.

NODC Standard Product: NODC Taxonomic Code on CD-ROM (NODC Accession 0050418)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The content of the NODC Taxonomic Code, Version 8 CD-ROM (CD-ROM NODC-68) distributed by NODC is archived in this accession. Version 7 of the NODC Taxonomic Code...

A taxonomic revision of Lamium (Lamiaceae)

NARCIS (Netherlands)

Mennema, J.

1989-01-01

The present study deals with the systematics and taxonomy of the genus Lamium (Lamiaceae). The taxonomic revision is mainly based on the study of herbarium collections, and to a smaller degree on field observations and abstracts from literature. The research was done at the Rijksherbarium, Leyden,

Taxonomic novelties in African Dracaena (Dracaenaceae)

NARCIS (Netherlands)

Damen, T.H.J.; Burg, van der W.J.; Wiland-Szymańska, J.; Sosef, M.S.M.

2018-01-01

In preparing the treatment of Dracaena for Flore du Gabon and Flore d’Afrique centrale, a relatively high number of taxonomic and nomenclatural novelties were discovered; these are presented here. Within Dracaena five species and one forma are described as new, D. bushii, D. haemanthoides, D.

Genomic characterization reconfirms the taxonomic status of Lactobacillus parakefiri

Science.gov (United States)

TANIZAWA, Yasuhiro; KOBAYASHI, Hisami; KAMINUMA, Eli; SAKAMOTO, Mitsuo; OHKUMA, Moriya; NAKAMURA, Yasukazu; ARITA, Masanori; TOHNO, Masanori

2017-01-01

Whole-genome sequencing was performed for Lactobacillus parakefiri JCM 8573T to confirm its hitherto controversial taxonomic position. Here, we report its first reliable reference genome. Genome-wide metrics, such as average nucleotide identity and digital DNA-DNA hybridization, and phylogenomic analysis based on multiple genes supported its taxonomic status as a distinct species in the genus Lactobacillus. The availability of a reliable genome sequence will aid future investigations on the industrial applications of L. parakefiri in functional foods such as kefir grains. PMID:28748134

Textual healing: tailor-made kabbalistic therapeutics in Jerusalem.

Science.gov (United States)

Guzmen-Carmeli, Shlomo; Sharabi, Asaf

2017-10-30

This paper, based on fieldwork conducted in a Jerusalem yeshiva, describes how the yeshiva, a traditional institute of religious studies, also serves as an institution of healing and personal therapy in which sacred religious texts assume a central place. The article focuses on personal sessions between the rabbi who heads the yeshiva, and his audience of believers who turn to him for help in coping with personal hardships and tribulations. The paper contextualizes and elaborates upon the concept of 'deep healing' to describe how the rabbi uses his regular 'tool kit' to diagnose the problems of the person facing him and to offer optimal, personalized therapy. The rabbi uses religious texts to create textual deep healing processes that are tailor-made for the individual supplicant and are intended to accompany supplicants for a long period of time.

Evaluating the effects of massed and distributed practice on acquisition and maintenance of tacts and textual behavior with typically developing children.

Science.gov (United States)

Haq, Shaji S; Kodak, Tiffany

2015-01-01

This study evaluated the effects of massed and distributed practice on the acquisition of tacts and textual behavior in typically developing children. We compared the effects of massed practice (i.e., consolidating all practice opportunities during the week into a single session) and distributed practice (i.e., distributing all practice opportunities across 4 sessions during the week) on the acquisition of textual behavior in English, tacting pictures of common nouns in Spanish, and textual behavior in Spanish using an adapted alternating treatments design embedded within a multiple probe design. We also examined correct responding during probes that (a) excluded prompts and reinforcement and (b) occurred 48 hr after training each week. The results indicated that distributed practice was the more efficient training format. Maintenance data collected up to 4 weeks after training also indicated that the participants consistently displayed higher levels of correct responding to targets that had been trained in distributed format. We discuss implications for practice and potential areas for future research. © Society for the Experimental Analysis of Behavior.

Using geographical and taxonomic metadata to set priorities in specimen digitization

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Walter G. Berendsohn

2010-10-01

Full Text Available Digitizing the information carried by specimens in natural history collections is a key endeavor providing falsifiable information about past and present biodiversity on a global scale, for application in a variety of research fields far beyond the current application in biosystematics. Existing digitization efforts are driven by individual institutional necessities and are not coordinated on a global scale. This led to an over-all information resource that is patchy in taxonomic and geographic coverage as well as in quality. Digitizing all specimens is not an achievable aim at present, so that priorities need to be set. Most biodiversity studies are both taxonomically and geographically restricted, but access to non-digitized collection information is almost exclusively by taxon name. Creating a “Geotaxonomic Index” providing metadata on the number of specimens from a specific geographic region belonging to a specific higher taxonomic category may provide a means to attract the attention of researchers and governments towards relevant non-digitized holdings of the collections and set priorities for their digitization according to the needs of information users outside the taxonomic community.

Textual and chemical information processing: different domains but similar algorithms

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Peter Willett

2000-01-01

Full Text Available This paper discusses the extent to which algorithms developed for the processing of textual databases are also applicable to the processing of chemical structure databases, and vice versa. Applications discussed include: an algorithm for distribution sorting that has been applied to the design of screening systems for rapid chemical substructure searching; the use of measures of inter-molecular structural similarity for the analysis of hypertext graphs; a genetic algorithm for calculating term weights for relevance feedback searching for determining whether a molecule is likely to exhibit biological activity; and the use of data fusion to combine the results of different chemical similarity searches.

How Strong Is Your Coffee? The Influence of Visual Metaphors and Textual Claims on Consumers' Flavor Perception and Product Evaluation.

Science.gov (United States)

Fenko, Anna; de Vries, Roxan; van Rompay, Thomas

2018-01-01

This study investigates the relative impact of textual claims and visual metaphors displayed on the product's package on consumers' flavor experience and product evaluation. For consumers, strength is one of the most important sensory attributes of coffee. The 2 × 3 between-subjects experiment ( N = 123) compared the effects of visual metaphor of strength (an image of a lion located either on top or on the bottom of the package of coffee beans) and the direct textual claim ("extra strong") on consumers' responses to coffee, including product expectation, flavor evaluation, strength perception and purchase intention. The results demonstrate that both the textual claim and the visual metaphor can be efficient in communicating the product attribute of strength. The presence of the image positively influenced consumers' product expectations before tasting. The textual claim increased the perception of strength of coffee and the purchase intention of the product. The location of the image also played an important role in flavor perception and purchase intention. The image located on the bottom of the package increased the perceived strength of coffee and purchase intention of the product compared to the image on top of the package. This result could be interpreted from the perspective of the grounded cognition theory, which suggests that a picture in the lower part of the package would automatically activate the "strong is heavy" metaphor. As heavy objects are usually associated with a position on the ground, this would explain why perceiving a visually heavy package would lead to the experience of a strong coffee. Further research is needed to better understand the relationships between a metaphorical image and its spatial position in food packaging design.

Expressing emotions in blogs : The role of textual paralinguistic cues in online venting and social sharing posts

NARCIS (Netherlands)

Rodríguez-Hidalgo, Carmina; Tan, Ed S.H.; Verlegh, Peeter W.J.

2017-01-01

Textual paralanguage cues (TPC) have been signaled as effective emotion transmitters online. Though several studies have investigated their properties and occurrence, there remains a gap concerning their communicative impact within specific psychological processes, such as the social sharing of

Multi-scale functional and taxonomic β-diversity of the macroinvertebrate communities in a Mediterranean coastal lagoon

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D. CABANA

2017-03-01

Full Text Available Benthic macroinvertebrate communities form the basis of the intricate lagoonal food web. Understanding their functional and taxonomic response, from a β-diversity perspective, is essential to disclose underlying patterns with potential applicability in conservation and management actions. Within the central lagoon of Messolonghi we studied the main environmental components structuring the macroinvertebrate community. We analyzed the β-taxonomic and β-functional diversity across the main habitats and seasons, over a year time frame. Our results outline habitat type and vegetation biomass as the major factors structuring the communities. We found environmental variability to have a positive correlation with functional β-diversity, however no correlation was found with taxonomic β-diversity. Across the seasons an asynchronous response of the functional and taxonomic β-diversity was identified. The taxonomic composition displayed significant heterogeneity during the driest period and the functional during the rainy season. Across the habitats the unvegetated presented higher taxonomic homogeneity and functionally heterogeneity, contrary the vegetated habitats present higher taxonomic variability and functional homogeneity. Across the seasons and habitats a pattern of functional redundancy and taxonomic replacement was identified. Besides high functional turnover versus low taxonomic turnover was documented in an anthropogenic organically enriched habitat We conclude that habitats display independent functional and taxonomic seasonal patterns, thus different processes may contribute to their variability. The framework presented here highlights the importance of studying both β-diversity components framed in a multiscale approach to better understand ecological processes and variability patterns. These results are important to understand macroinvertebrate community assembly processes and are valuable for conservation purposes.

Human impacts on functional and taxonomic homogenization of plateau fish assemblages in Yunnan, China

Directory of Open Access Journals (Sweden)

Guohuan Su

2015-07-01

Full Text Available Human activities and the consequent extinctions of native species and invasions of non-native species have been changing the composition of species assemblages worldwide. These anthropogenic impacts alter not only the richness of assemblages but also the biological dissimilarity among them. However, much of the research effort to date has focused on changes in taxonomic dissimilarity (i.e. accounting for species composition whether assessments of functional dissimilarity (i.e. accounting for the diversity of biological traits are much more scarce, despite revealing important complimentary information by accounting for changes in the diversity of biological traits. Here, we assess the temporal (1950s against 2000s changes in both taxonomic and functional dissimilarities of freshwater fish assemblages across lakes from the Yunnan Plateau in China. The Jaccard index to quantify the changes in both taxonomic and functional dissimilarity. We then partitioned dissimilarity to extract its turnover component and measured the changes in the contribution of turnover to dissimilarity. We found that functional and taxonomic homogenization occurred simultaneously. However, patterns between these two processes differed for some lakes. Taxonomic and functional homogenizations were stronger when the historical level of taxonomic dissimilarity among assemblages was high. The impact of extinctions of native species and invasions of non-native species on homogenization was otherwise complex to disentangle with no significant effect of any of the studied environmental factors. In agreement with other studies, our study proved that change in taxonomic dissimilarity cannot be used to predict changes in functional dissimilarity and, as an indicator of ecosystem functioning, functional dissimilarity should be used together with taxonomic dissimilarity to attain a more holistic understanding of human impacts on natural ecosystems.

Comprensión y producción textual narrativa en preescolares

OpenAIRE

Luz Stella López Silva; Claudia Patricia Duque Aristizabal; Gina Lizeth Camargo Deluque; Amalia Ovalle Parra

2014-01-01

Este estudio buscó identificar y describir las habilidades de comprensión y producción textual narrativa de 158 estudiantes de transición de estrato 1 y 2 de colegios públicos de la ciudad de Barranquilla (Colombia). Para evaluar esta capacidad se les pidió a los niños que narraran un texto que se les había leído anteriormente. Las muestras de lenguaje se analizaron utilizando el software SALT y posteriormente se utilizó el software SPSS para realizar los análisis descriptivos. Se consideró l...

Redemptive Family Narratives: Olga Lengyel and the Textuality of the Holocaust*

Science.gov (United States)

Turda, Marius

2016-01-01

Memoirs written by Holocaust survivors and (in some cases) their testimonies retain a salience unmatched by other historical sources. This article discusses one such memoir, Olga Lengyel’s Five Chimneys, alongside her 1998 testimony, aiming to engage with broader methodological issues relating to the history of the Holocaust, particularly those about memory, narrative and textuality. Through a detailed discussion of certain moments shaping Olga Lengyel’s personal experience, both pre-and post-arrival in Auschwitz, the article captures the tensions and contradictions characterizing the harrowing story of one woman’s loss of family in the Holocaust. PMID:27959969

Algunas consideraciones sobre la economía textual

Directory of Open Access Journals (Sweden)

Lic. Carlos Lázaro Nodals García

2016-03-01

Full Text Available l artículo aborda el fenómeno de la proliferación de nuevos textos en las redes sociales, otras plataformas interactivas y equipos donde se aplican las tecnologías de la información y la comunicación. Se hace un análisis de sus características, contextos en que se producen y la escritura con economía textual, como centro de un debate entre las posiciones que la rechazan o exponen los problemas que puede originar en el ámbito del respeto a la lengua materna, los que ven en los mismos un fenómeno objetivo, que es necesario asimilar además de contextualizar, entre los que se encuentran los autores del trabajo, que incluso aprecian su dominio, como parte de las competencias culturales y comunicativas del profesional proactivo del siglo XXI.

Teach for America's Long Arc: A Critical Race Theory Textual Analysis of Wendy Kopp's Works

Science.gov (United States)

Barnes, Michael C.; Germain, Emily K.; Valenzuela, Angela

2016-01-01

We read and analyzed 165,000 words and uncover a series of counter-stories buried within a textual corpus, authored by Teach For America (TFA) founder Wendy Kopp (Kopp, 1989, 2001; Kopp & Farr, 2011), that offers insight into the forms of racism endemic to Teach For America. All three counter-stories align with a critical race theory (CRT)…

Developing green supply chain management strategies: A taxonomic approach

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Michael Mutingi

2013-06-01

Full Text Available Purpose: The objective of this research is to explore the empirical green supply chain activities found in literature, and to develop a taxonomic framework that can be used for formulating appropriate strategies for green supply chains, based on characteristic dimensions for the green supply chain. Design/methodology/approach: The taxonomic framework is developed through (i analysis of green supply chain activities found in existing empirical work or case studies recorded in literature, (ii identification of key dimensions that influence green supply chain management strategies, and (iii development of a taxonomic scheme for selecting or developing green strategies. Findings: The paper finds that this study yielded: a set of three characteristic dimensions that influence strategic green supply chain management, and a guided structured approach selecting appropriate green strategies, providing managerial insights. Research limitations/implications: This paper shows that future work includes development of specific performance management indices according to the taxonomy of green strategies developed in this study. Practical implications: This research provided a practical guided approach that enhances appropriate formulation of green strategies for green supply chain management, while providing sound managerial insights for the supply chain decision maker. The choice of supply chain strategy directly impacts the overall environmental, economic and operations performance of the supply chain. Originality/value: This study presents to supply chain decision makers a new taxonomic framework that simplifies and enhances the formulation of green strategies, and to researchers a comparative understanding of various strategies applicable to green supply chains.

How Strong Is Your Coffee? The Influence of Visual Metaphors and Textual Claims on Consumers’ Flavor Perception and Product Evaluation

Science.gov (United States)

Fenko, Anna; de Vries, Roxan; van Rompay, Thomas

2018-01-01

This study investigates the relative impact of textual claims and visual metaphors displayed on the product’s package on consumers’ flavor experience and product evaluation. For consumers, strength is one of the most important sensory attributes of coffee. The 2 × 3 between-subjects experiment (N = 123) compared the effects of visual metaphor of strength (an image of a lion located either on top or on the bottom of the package of coffee beans) and the direct textual claim (“extra strong”) on consumers’ responses to coffee, including product expectation, flavor evaluation, strength perception and purchase intention. The results demonstrate that both the textual claim and the visual metaphor can be efficient in communicating the product attribute of strength. The presence of the image positively influenced consumers’ product expectations before tasting. The textual claim increased the perception of strength of coffee and the purchase intention of the product. The location of the image also played an important role in flavor perception and purchase intention. The image located on the bottom of the package increased the perceived strength of coffee and purchase intention of the product compared to the image on top of the package. This result could be interpreted from the perspective of the grounded cognition theory, which suggests that a picture in the lower part of the package would automatically activate the “strong is heavy” metaphor. As heavy objects are usually associated with a position on the ground, this would explain why perceiving a visually heavy package would lead to the experience of a strong coffee. Further research is needed to better understand the relationships between a metaphorical image and its spatial position in food packaging design. PMID:29459840

How Strong Is Your Coffee? The Influence of Visual Metaphors and Textual Claims on Consumers’ Flavor Perception and Product Evaluation

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Anna Fenko

2018-02-01

Full Text Available This study investigates the relative impact of textual claims and visual metaphors displayed on the product’s package on consumers’ flavor experience and product evaluation. For consumers, strength is one of the most important sensory attributes of coffee. The 2 × 3 between-subjects experiment (N = 123 compared the effects of visual metaphor of strength (an image of a lion located either on top or on the bottom of the package of coffee beans and the direct textual claim (“extra strong” on consumers’ responses to coffee, including product expectation, flavor evaluation, strength perception and purchase intention. The results demonstrate that both the textual claim and the visual metaphor can be efficient in communicating the product attribute of strength. The presence of the image positively influenced consumers’ product expectations before tasting. The textual claim increased the perception of strength of coffee and the purchase intention of the product. The location of the image also played an important role in flavor perception and purchase intention. The image located on the bottom of the package increased the perceived strength of coffee and purchase intention of the product compared to the image on top of the package. This result could be interpreted from the perspective of the grounded cognition theory, which suggests that a picture in the lower part of the package would automatically activate the “strong is heavy” metaphor. As heavy objects are usually associated with a position on the ground, this would explain why perceiving a visually heavy package would lead to the experience of a strong coffee. Further research is needed to better understand the relationships between a metaphorical image and its spatial position in food packaging design.

The taxlist package: managing plant taxonomic lists in R

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Miguel Alvarez

2018-05-01

Full Text Available Taxonomic lists are crucial elements of vegetation-plot databases and provide the links between original entries, reference taxon views and different taxon concepts. We introduce the R package taxlist in the context of object-oriented modelling for taxonomic lists. This package provides a data structure based on species lists in Turboveg, which is a software broadly used for the storage of vegetation-plot databases and implements functions for importing and handling them prior to statistical analysis. We also present a schema for relational databases, compatible with taxlist objects and recommend its use for handling diversity records.

Taxonomic separation of hippocampal networks: principal cell populations and adult neurogenesis

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Roelof Maarten evan Dijk

2016-03-01

Full Text Available While many differences in hippocampal anatomy have been described between species, it is typically not clear if they are specific to a particular species and related to functional requirements or if they are shared by species of larger taxonomic units. Without such information, it is difficult to infer how anatomical differences may impact on hippocampal function, because multiple taxonomic levels need to be considered to associate behavioral and anatomical changes. To provide information on anatomical changes within and across taxonomic ranks, we present a quantitative assessment of hippocampal principal cell populations in 20 species or strain groups, with emphasis on rodents, the taxonomic group that provides most animals used in laboratory research. Of special interest is the importance of adult hippocampal neurogenesis in species-specific adaptations relative to other cell populations. Correspondence analysis of cell numbers shows that across taxonomic units, phylogenetically related species cluster together, sharing similar proportions of principal cell populations. CA3 and hilus are strong separators that place rodent species into a tight cluster based on their relatively large CA3 and small hilus while non-rodent species (including humans and non-human primates are placed on the opposite side of the spectrum. Hilus and CA3 are also separators within rodents, with a very large CA3 and rather small hilar cell populations separating mole-rats from other rodents that, in turn, are separated from each other by smaller changes in the proportions of CA1 and granule cells. When adult neurogenesis is included, the relatively small populations of young neurons, proliferating cells and hilar neurons become main drivers of taxonomic separation within rodents. The observations provide challenges to the computational modeling of hippocampal function, suggest differences in the organization of hippocampal information streams in rodent and non

Taxonomic considerations in listing subspecies under the U.S. Endangered Species Act.

Science.gov (United States)

Haig, Susan M; Beever, Erik A; Chambers, Steven M; Draheim, Hope M; Dugger, Bruce D; Dunham, Susie; Elliott-Smith, Elise; Fontaine, Joseph B; Kesler, Dylan C; Knaus, Brian J; Lopes, Iara F; Loschl, Pete; Mullins, Thomas D; Sheffield, Lisa M

2006-12-01

The U.S. Endangered Species Act (ESA) allows listing of subspecies and other groupings below the rank of species. This provides the U.S. Fish and Wildlife Service and the National Marine Fisheries Service with a means to target the most critical unit in need of conservation. Although roughly one-quarter of listed taxa are subspecies, these management agencies are hindered by uncertainties about taxonomic standards during listing or delisting activities. In a review of taxonomic publications and societies, we found few subspecies lists and none that stated standardized criteria for determining subspecific taxa. Lack of criteria is attributed to a centuries-old debate over species and subspecies concepts. Nevertheless, the critical need to resolve this debate for ESA listings led us to propose that minimal biological criteria to define disjunct subspecies (legally or taxonomically) should include the discreteness and significance criteria of distinct population segments (as defined under the ESA). Our subspecies criteria are in stark contrast to that proposed by supporters of the phylogenetic species concept and provide a clear distinction between species and subspecies. Efforts to eliminate or reduce ambiguity associated with subspecies-level classifications will assist with ESA listing decisions. Thus, we urge professional taxonomic societies to publish and periodically update peer-reviewed species and subspecies lists. This effort must be paralleled throughout the world for efficient taxonomic conservation to take place.

More than just orphans: are taxonomically-restricted genes important in evolution?

Science.gov (United States)

Khalturin, Konstantin; Hemmrich, Georg; Fraune, Sebastian; Augustin, René; Bosch, Thomas C G

2009-09-01

Comparative genome analyses indicate that every taxonomic group so far studied contains 10-20% of genes that lack recognizable homologs in other species. Do such 'orphan' or 'taxonomically-restricted' genes comprise spurious, non-functional ORFs, or does their presence reflect important evolutionary processes? Recent studies in basal metazoans such as Nematostella, Acropora and Hydra have shed light on the function of these genes, and now indicate that they are involved in important species-specific adaptive processes. Here we focus on evidence from Hydra suggesting that taxonomically-restricted genes play a role in the creation of phylum-specific novelties such as cnidocytes, in the generation of morphological diversity, and in the innate defence system. We propose that taxon-specific genes drive morphological specification, enabling organisms to adapt to changing conditions.

The Textualization of Problem Handling: Lean Discourses Meet Professional Competence in Eldercare and the Manufacturing Industry

Science.gov (United States)

Karlsson, Anna-Malin; Nikolaidou, Zoe

2016-01-01

This article reports on research addressing the role of incident reporting at the workplace as a textual representation of lean management techniques. It draws on text and discourse analysis as well as on ethnographic data, including interviews, recorded interaction, and observations, from two projects on workplace literacy in Sweden: a study in…

The Effects of Visual and Textual Annotations on Spanish Listening Comprehension, Vocabulary Acquisition and Cognitive Load

Science.gov (United States)

Cottam, Michael Evan

2010-01-01

The purpose of this experimental study was to investigate the effects of textual and visual annotations on Spanish listening comprehension and vocabulary acquisition in the context of an online multimedia listening activity. 95 students who were enrolled in different sections of first year Spanish classes at a community college and a large…

Taxonomic status of the roses (Rosa) described by S.G. Dimitrov from Bulgaria

DEFF Research Database (Denmark)

Zielinski, J.; Petrova, A; Tan, Kit

2004-01-01

The original herbarium vouchers for six species of Rosa (Rosaceae) described by S. G. Dimitrov from Bulgaria are taxonomically evaluated. Two species (R. balcanica, R. orphei) are considered hybrids, four other names (R. bulgarica, R. parilica, R. pontica and R. rhodopaea) are taxonomic synonyms...

Korean deaf adolescents' recognition of written words for taxonomic categories of different levels.

Science.gov (United States)

Li, Degao; Yi, Kwangoh; Kim, Jung Yeon

2011-04-01

Deaf college students seem to have relatively stronger associations from words for taxonomic categories of basic (e.g., snake) to those of super-ordinate (e.g., reptiles) level than vice versa compared with hearing students in word association (Marschark, Convertino, McEvoy & Masteller, 2004). In deciding whether two sequentially presented words for taxonomic categories of different levels are conceptually related, deaf adolescents might therefore have a poorer performance when they see a category name before than when they see it after one of the corresponding exemplar words. Deaf Korean adolescents were found to recognize words for taxonomic categories of super-ordinate level with lower efficiencies than those of basic level. Their accuracy seemed to reflect a reversed typicality effect when they decided that first-presented words for taxonomic categories of basic level were conceptually related to second-presented words for those of super-ordinate level. It was argued that deaf Korean adolescents went through a temporary stage of having iconic representations of several exemplars of the category aroused in working memory before the abstract semantic representation was fully activated when they saw the word for a taxonomic category of super-ordinate level. © 2010 The Authors. Scandinavian Journal of Psychology © 2010 The Scandinavian Psychological Associations.

Selection of multiple umbrella species for functional and taxonomic diversity to represent urban biodiversity.

Science.gov (United States)

Sattler, T; Pezzatti, G B; Nobis, M P; Obrist, M K; Roth, T; Moretti, M

2014-04-01

Surrogates, such as umbrella species, are commonly used to reduce the complexity of quantifying biodiversity for conservation purposes. The presence of umbrella species is often indicative of high taxonomic diversity; however, functional diversity is now recognized as an important metric for biodiversity and thus should be considered when choosing umbrella species. We identified umbrella species associated with high taxonomic and functional biodiversity in urban areas in Switzerland. We analyzed 39,752 individuals of 574 animal species from 96 study plots and 1397 presences of 262 plant species from 58 plots. Thirty-one biodiversity measures of 7 taxonomic groups (plants, spiders, bees, ground beetles, lady bugs, weevils and birds) were included in within- and across-taxa analyses. Sixteen measures were taxonomical (species richness and species diversity), whereas 15 were functional (species traits including mobility, resource use, and reproduction). We used indicator value analysis to identify umbrella species associated with single or multiple biodiversity measures. Many umbrella species were indicators of high biodiversity within their own taxonomic group (from 33.3% in weevils to 93.8% in birds), to a lesser extent they were indicators across taxa. Principal component analysis revealed that umbrella species for multiple measures of biodiversity represented different aspects of biodiversity, especially with respect to measures of taxonomic and functional diversity. Thus, even umbrella species for multiple measures of biodiversity were complementary in the biodiversity aspects they represented. Thus, the choice of umbrella species based solely on taxonomic diversity is questionable and may not represent biodiversity comprehensively. Our results suggest that, depending on conservation priorities, managers should choose multiple and complementary umbrella species to assess the state of biodiversity. © 2013 Society for Conservation Biology.

Seasonality, distribution and taxonomic status of avian ...

African Journals Online (AJOL)

Description of a new species is based upon morphology of gametocyte development in the peripheral blood of the avian host. This does not distinguish between morphologically identical gametocytes from different avian host families, nor is species or family level a valid taxonomic character. Thus, Haemoproteus and ...

Attitudes and emotions through written text: the case of textual deformation in internet chat rooms.

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Francisco Yus Ramos

2010-11-01

Full Text Available Normal 0 21 false false false ES X-NONE X-NONE MicrosoftInternetExplorer4 /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Tabla normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-qformat:yes; mso-style-parent:""; mso-padding-alt:0cm 5.4pt 0cm 5.4pt; mso-para-margin-top:0cm; mso-para-margin-right:0cm; mso-para-margin-bottom:10.0pt; mso-para-margin-left:0cm; line-height:115%; mso-pagination:widow-orphan; font-size:11.0pt; font-family:"Calibri","sans-serif"; mso-ascii-font-family:Calibri; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:"Times New Roman"; mso-fareast-theme-font:minor-fareast; mso-hansi-font-family:Calibri; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi;} Los chats españoles de Internet son visitados por muchos jóvenes que usan el lenguaje de una forma muy creativa (ej. repetición de letras y signos de puntuación. En este artículo se evalúan varias hipótesis sobre el uso de la deformación textual respecto a su eficacia comunicativa. Se trata de comprobar si estas deformaciones favorecen una identificación y evaluación más adecuada de las actitudes (proposicionales o afectivas y emociones de sus autores. Las respuestas a un cuestionario revelan que a pesar de la información adicional que la deformación textual aporta, los lectores no suelen coincidir en la cualidad exacta de estas actitudes y emociones, ni establecen grados de intensidad relacionados con la cantidad de texto tecleada. Sin embargo, y a pesar de estos resultados, la deformación textual parece jugar un papel en la interpretación que finalmente se elige de estos mensajes enviados a los chats.

Interactive SIGHT: textual access to simple bar charts

Science.gov (United States)

Demir, Seniz; Oliver, David; Schwartz, Edward; Elzer, Stephanie; Carberry, Sandra; Mccoy, Kathleen F.; Chester, Daniel

2010-12-01

Information graphics, such as bar charts and line graphs, are an important component of many articles from popular media. The majority of such graphics have an intention (a high-level message) to communicate to the graph viewer. Since the intended message of a graphic is often not repeated in the accompanying text, graphics together with the textual segments contribute to the overall purpose of an article and cannot be ignored. Unfortunately, these visual displays are provided in a format which is not readily accessible to everyone. For example, individuals with sight impairments who use screen readers to listen to documents have limited access to the graphics. This article presents a new accessibility tool, the Interactive SIGHT (Summarizing Information GrapHics Textually) system, that is intended to enable visually impaired users to access the knowledge that one would gain from viewing information graphics found on the web. The current system, which is implemented as a browser extension that works on simple bar charts, can be invoked by a user via a keystroke combination while navigating the web. Once launched, Interactive SIGHT first provides a brief summary that conveys the underlying intention of a bar chart along with the chart's most significant and salient features, and then produces history-aware follow-up responses to provide further information about the chart upon request from the user. We present two user studies that were conducted with sighted and visually impaired users to determine how effective the initial summary and follow-up responses are in conveying the informational content of bar charts, and to evaluate how easy it is to use the system interface. The evaluation results are promising and indicate that the system responses are well-structured and enable visually impaired users to answer key questions about bar charts in an easy-to-use manner. Post-experimental interviews revealed that visually impaired participants were very satisfied with

Taxonomically restricted genes are associated with the evolution of sociality in the honey bee

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Tsutsui Neil D

2011-03-01

Full Text Available Abstract Background Studies have shown that taxonomically restricted genes are significant in number and important for the evolution of lineage specific traits. Social insects have gained many novel morphological and behavioral traits relative to their solitary ancestors. The task repertoire of an advanced social insect, for example, can be 40-50 tasks, about twice that of a solitary wasp or bee. The genetic basis of this expansion in behavioral repertoire is still poorly understood, and a role for taxonomically restricted genes has not been explored at the whole genome level. Results Here we present comparative genomics results suggesting that taxonomically restricted genes may have played an important role in generating the expansion of behavioral repertoire associated with the evolution of eusociality. First, we show that the current honey bee official gene set contains about 700 taxonomically restricted genes. These are split between orphans, genes found only in the Hymenoptera, and genes found only in insects. Few of the orphans or genes restricted to the Hymenoptera have been the focus of experimental work, but several of those that have are associated with novel eusocial traits or traits thought to have changed radically as a consequence of eusociality. Second, we predicted that if taxonomically restricted genes are important for generating novel eusocial traits, then they should be expressed with greater frequency in workers relative to the queen, as the workers exhibit most of the novel behavior of the honey bee relative to their solitary ancestors. We found support for this prediction. Twice as many taxonomically restricted genes were found amongst the genes with higher expression in workers compared to those with higher expression in queens. Finally, we compiled an extensive list of candidate taxonomically restricted genes involved in eusocial evolution by analyzing several caste specific gene expression data sets. Conclusions This

Journeys toward Textual Relevance: Male Readers of Color and the Significance of Malcolm X and Harry Potter

Science.gov (United States)

Sciurba, Katie

2017-01-01

This article combines interview data from a group of boys of color at an urban single-sex school and content analysis of "The Autobiography of Malcolm X" and "Harry Potter and the Sorcerer's Stone" to demonstrate the complexities of readers' responses to literature. Textual relevance, or the ability to construct personal…

Integrating Ontological Knowledge and Textual Evidence in Estimating Gene and Gene Product Similarity

Energy Technology Data Exchange (ETDEWEB)

Sanfilippo, Antonio P.; Posse, Christian; Gopalan, Banu; Tratz, Stephen C.; Gregory, Michelle L.

2006-06-08

With the rising influence of the Gene On-tology, new approaches have emerged where the similarity between genes or gene products is obtained by comparing Gene Ontology code annotations associ-ated with them. So far, these approaches have solely relied on the knowledge en-coded in the Gene Ontology and the gene annotations associated with the Gene On-tology database. The goal of this paper is to demonstrate that improvements to these approaches can be obtained by integrating textual evidence extracted from relevant biomedical literature.

Taxonomic Challenges and Distribution of Gracilarioid Algae ...

African Journals Online (AJOL)

This paper reviews the taxonomical literature of the gracilarioid algae from Tanzania, and provides information about their ecology and distribution based on an intensive regime of local collection. Its aim was to provide names, even if on a preliminary basis, for local gracilarioid taxa. Our revision shows that species ...

Environmental metabarcodes for insects: in silico PCR reveals potential for taxonomic bias.

Science.gov (United States)

Clarke, Laurence J; Soubrier, Julien; Weyrich, Laura S; Cooper, Alan

2014-11-01

Studies of insect assemblages are suited to the simultaneous DNA-based identification of multiple taxa known as metabarcoding. To obtain accurate estimates of diversity, metabarcoding markers ideally possess appropriate taxonomic coverage to avoid PCR-amplification bias, as well as sufficient sequence divergence to resolve species. We used in silico PCR to compare the taxonomic coverage and resolution of newly designed insect metabarcodes (targeting 16S) with that of existing markers [16S and cytochrome oxidase c subunit I (COI)] and then compared their efficiency in vitro. Existing metabarcoding primers amplified in silico 90% coverage. Furthermore, metabarcodes targeting COI appeared to introduce taxonomic PCR-amplification bias, typically amplifying a greater percentage of Lepidoptera and Diptera species, while failing to amplify certain orders in silico. To test whether bias predicted in silico was observed in vitro, we created an artificial DNA blend containing equal amounts of DNA from 14 species, representing 11 insect orders and one arachnid. We PCR-amplified the blend using five primer sets, targeting either COI or 16S, with high-throughput amplicon sequencing yielding more than 6 million reads. In vitro results typically corresponded to in silico PCR predictions, with newly designed 16S primers detecting 11 insect taxa present, thus providing equivalent or better taxonomic coverage than COI metabarcodes. Our results demonstrate that in silico PCR is a useful tool for predicting taxonomic bias in mixed template PCR and that researchers should be wary of potential bias when selecting metabarcoding markers. © 2014 John Wiley & Sons Ltd.

Textual Harassment: A New Historicist Reappraisal of the Parol Evidence With Gender in Mind

OpenAIRE

Keren, Hila

2004-01-01

This year marks the four hundredth anniversary of the Parol Evidence Rule, the rule that dictates that the interpretation of a written contract should be determined solely according to its text and not influenced by prior contradictory external information. This article uses the occasion to offer a fresh interdisciplinary view of the Rule. The analysis presents a unique contribution to the heated debate regarding the desired levels of formalism and textualism in present-day contract law, by u...

Polyphasic taxonomic characterization of lactic acid bacteria ...

African Journals Online (AJOL)

The results of these analyses showed that ting fermentation involved at least three different species of LAB, i.e. Lactobacillus fermentum, L. plantarum and L. rhamnosus. To our knowledge, this is the first report of polyphasic taxonomic characterization of LAB from this food. This research forms an essential first step towards ...

COERÊNCIA IMAGÉTICO-TEXTUAL NO GÊNERO QUADRINHOS?

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Jack Brandão

2015-12-01

Full Text Available Este artigo objetiva o estudo analítico das linguagens verbal e não verbal presentes nas histórias em quadrinhos (tiras, com o intuito de verificar como a união das duas linguagens presentes no gênero é eficiente enquanto mecanismo auxiliador no processo de compreensão da mensagem transmitida. Enfatiza-se ainda a importância da parceria autor-leitor e de outros elementos como essenciais para que a leitura do (contexto aconteça, enfatizando-se a força do texto não verbal nesse processo. Esta investigação está alicerçada nos pressupostos teóricos da Linguística Textual e, em especial, do conceito de coerência, utilizando-se da leitura e análise de tiras elucidativas da personagem Mafalda, criação do cartunista argentino Quino, nos anos 60.

Phytoliths as Emerging Taxonomic Tools for Identification of Plants: An Overview

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Sheikh Abdul Shakoor

2014-01-01

Full Text Available In the recent advancements in identification of plant species, phytoliths have found an immense role in the identification of plants at different levels of taxonomic hierarchy. Many plant groups are known to accumulate silica in solid form in and between the cells and tissues and hence create the structures commonly known as phytoliths. These phytoliths create replicas of the structures where they are deposited. The shapes of phytolith replicas, their size dimensions (morphometric parameters, surface features (ornamentation, distribution, and orientation pattern in epidermal layers of vegetative and reproductive structures as well as their frequency are highly important for characterization of species. Monocotyledonous families particularly the family Poaceae (Gramineae are known to produce diverse phytolith types that can serve as diagnostic markers for characterization of different taxa at different levels of taxonomic hierarchy. The present paper highlights the importance of phytoliths in taxonomic analysis of plants particularly in the family Poaceae.

A taxonomic study on the diversity of Indian Knema Lour. (Myristicaceae

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Dipanwita Banik

2016-06-01

Full Text Available A taxonomic study on the diversity of the genus Knema Lour. belonging to the family Myristicaceae R. Br. in India revealed the distribution of the ten taxa under four series in North East and Peninsular India and Andaman and Nicobar Islands including two endemic species. Knema ser. Obovoideae W.J. de Wilde is synonymised here under ser. Knema. Series Knema is represented by two species and ser. Glaucae W.J. de Wilde by one species in North East India, while ser. Laurinae W.J. de Wilde is represented by three species and two subspecies in North East India and Andaman and Nicobar Island, and ser. Glomeratae W.J. de Wilde by 2 species in South and NE India. This is the first taxonomic study on the genus in India. All the taxa are cited with updated nomenclature, diagnostic characters, distribution, phonological data, vernacular names, line drawings, photo plates and specimens examined in various herbaria. Taxonomic keys are provided for easy identification of these taxa.

Generalizing human error rates: A taxonomic approach

International Nuclear Information System (INIS)

Buffardi, L.; Fleishman, E.; Allen, J.

1989-01-01

It is well established that human error plays a major role in malfunctioning of complex, technological systems and in accidents associated with their operation. Estimates of the rate of human error in the nuclear industry range from 20-65% of all system failures. In response to this, the Nuclear Regulatory Commission has developed a variety of techniques for estimating human error probabilities for nuclear power plant personnel. Most of these techniques require the specification of the range of human error probabilities for various tasks. Unfortunately, very little objective performance data on error probabilities exist for nuclear environments. Thus, when human reliability estimates are required, for example in computer simulation modeling of system reliability, only subjective estimates (usually based on experts' best guesses) can be provided. The objective of the current research is to provide guidelines for the selection of human error probabilities based on actual performance data taken in other complex environments and applying them to nuclear settings. A key feature of this research is the application of a comprehensive taxonomic approach to nuclear and non-nuclear tasks to evaluate their similarities and differences, thus providing a basis for generalizing human error estimates across tasks. In recent years significant developments have occurred in classifying and describing tasks. Initial goals of the current research are to: (1) identify alternative taxonomic schemes that can be applied to tasks, and (2) describe nuclear tasks in terms of these schemes. Three standardized taxonomic schemes (Ability Requirements Approach, Generalized Information-Processing Approach, Task Characteristics Approach) are identified, modified, and evaluated for their suitability in comparing nuclear and non-nuclear power plant tasks. An agenda for future research and its relevance to nuclear power plant safety is also discussed

Partial migration in fishes: definitions, methodologies and taxonomic distribution

DEFF Research Database (Denmark)

Chapman, B B; Skov, C; Hulthén, K

2012-01-01

published. In addition, previous work and synthesis has been hampered by a varied lexicon associated with this phenomenon in fishes. In this review, definitions and important concepts in partial migration research are discussed, and a classification system of the different forms of partial migration......Partial migration, where populations are composed of both migratory and resident individuals, is extremely widespread across the animal kingdom. Researchers studying fish movements have long recognized that many fishes are partial migrants, however, no detailed taxonomic review has ever been...... in fishes introduced. Next, a detailed taxonomic overview of partial migration in this group is considered. Finally, methodological approaches that ichthyologists can use to study this fascinating phenomenon are reviewed. Partial migration is more widespread amongst fishes than previously thought, and given...

MARTA: a suite of Java-based tools for assigning taxonomic status to DNA sequences.

Science.gov (United States)

Horton, Matthew; Bodenhausen, Natacha; Bergelson, Joy

2010-02-15

We have created a suite of Java-based software to better provide taxonomic assignments to DNA sequences. We anticipate that the program will be useful for protistologists, virologists, mycologists and other microbial ecologists. The program relies on NCBI utilities including the BLAST software and Taxonomy database and is easily manipulated at the command-line to specify a BLAST candidate's query-coverage or percent identity requirements; other options include the ability to set minimal consensus requirements (%) for each of the eight major taxonomic ranks (Domain, Kingdom, Phylum, ...) and whether to consider lower scoring candidates when the top-hit lacks taxonomic classification.

Hacia una biblioteca electrónica textual del teatro en español de 1868-1936 (BETTE

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José Calvo Tello

2015-12-01

Full Text Available http://dx.doi.org/10.5007/1807-9288.2015v11n2p171 En este artículo se presenta el proyecto BETTE que consiste en la creación de una biblioteca electrónica textual del teatro en español de 1868-1936. Este proyecto lo lleva a cabo el grupo GHEDI (Grupo de Humanidades y edición digital de la Universidad Internacional de la Rioja (UNIR. El texto presenta un breve panorama de los cambios introducidos por el impacto de lo digital en el ámbito de la edición textual y  ofrece un estado de la cuestión de los proyectos que actualmente desarrollan las bibliotecas electrónicas que utilizan XML-TEI para codificar textos electrónicos. Asimismo, en él se presta atención  a los llamados lenguajes de marcado y se presentan algunas características de TEI (Text Encoding Initiative. Finalmente, se describen las particularidades de nuestro proyecto, objetivos y primeros avances.

Predicting taxonomic and functional structure of microbial communities in acid mine drainage.

Science.gov (United States)

Kuang, Jialiang; Huang, Linan; He, Zhili; Chen, Linxing; Hua, Zhengshuang; Jia, Pu; Li, Shengjin; Liu, Jun; Li, Jintian; Zhou, Jizhong; Shu, Wensheng

2016-06-01

Predicting the dynamics of community composition and functional attributes responding to environmental changes is an essential goal in community ecology but remains a major challenge, particularly in microbial ecology. Here, by targeting a model system with low species richness, we explore the spatial distribution of taxonomic and functional structure of 40 acid mine drainage (AMD) microbial communities across Southeast China profiled by 16S ribosomal RNA pyrosequencing and a comprehensive microarray (GeoChip). Similar environmentally dependent patterns of dominant microbial lineages and key functional genes were observed regardless of the large-scale geographical isolation. Functional and phylogenetic β-diversities were significantly correlated, whereas functional metabolic potentials were strongly influenced by environmental conditions and community taxonomic structure. Using advanced modeling approaches based on artificial neural networks, we successfully predicted the taxonomic and functional dynamics with significantly higher prediction accuracies of metabolic potentials (average Bray-Curtis similarity 87.8) as compared with relative microbial abundances (similarity 66.8), implying that natural AMD microbial assemblages may be better predicted at the functional genes level rather than at taxonomic level. Furthermore, relative metabolic potentials of genes involved in many key ecological functions (for example, nitrogen and phosphate utilization, metals resistance and stress response) were extrapolated to increase under more acidic and metal-rich conditions, indicating a critical strategy of stress adaptation in these extraordinary communities. Collectively, our findings indicate that natural selection rather than geographic distance has a more crucial role in shaping the taxonomic and functional patterns of AMD microbial community that readily predicted by modeling methods and suggest that the model-based approach is essential to better understand natural

Qur’an-related Intertextuality: Textual Potentiation in Translation

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Aladdin Al-Kharabsheh

2017-09-01

Full Text Available Qur’an-related intertextuality, envisaged as an enriching communicative act both monolingually and interlingually, represents a case of semantic complexity that is wired to present inconceivable translation challenges. Drawing on Derrida’s (1977 dichotomy iterability/citationality, Kristeva’s (1980 vertical intertextuality, Fairclough’s (1992a; 1992b; 1995 & 2011 manifest intertextuality, and Bakhtin’s (1986 double voicing or re-accentuation, the study argues that Qur’an-related intertextuality is conducive of conceptual densities, the ‘harnessing’ of which requires ‘mobilizing’ those translation strategies that should exceed the lexicographical equivalence (Venuti 2009 to establish intertextual relations relevant to the form and theme of the foreign text. To resolve the arising translation problems, the study basically proposes two synthetic approaches: the gist-paratextual and the gist-exegetical. Translation skopos has been found to be central to the production and reception of intertextuality and to determining which of the two proposed synthetic approaches to operationalize. Finally, analysis shows that Qur’an proved to be a virtual breeding ground for textual dynamism and potentiation.

What Good’s a Text? Textuality, Orality, and Mathematical Astronomy in Early Imperial China

OpenAIRE

Morgan, Daniel Patrick

2014-01-01

Article submitted to Archives internationales d'histoire des sciences; International audience; This paper examines a 226 ce debate on li 曆 mathematical astronomy at the Cao-Wei (226–265) court as a case study in the role of orality and person-to-person exchange in the transmission of astronomical knowledge in early imperial China. The li- and mathematics-related manuscripts to have come down to us from the early imperial period often suffer from textual corruption, the form that this corrupti...

The Generator of the Event Structure Lexicon (GESL): Automatic Annotation of Event Structure for Textual Inference Tasks

Science.gov (United States)

Im, Seohyun

2013-01-01

This dissertation aims to develop the Generator of the Event Structure Lexicon (GESL) which is a tool to automate annotating the event structure of verbs in text to support textual inference tasks related to lexically entailed subevents. The output of the GESL is the Event Structure Lexicon (ESL), which is a lexicon of verbs in text which includes…

Textual Enhancement and Simplified Input: Effects on L2 Comprehension and Acquisition of Non-Meaningful Grammatical Form

Science.gov (United States)

Wong, Wynne

2003-01-01

The study set out to investigate how textual enhancement (TE) as a form of input enhancement and increasing the comprehensibility of input via simplified input (SI) might impact adult L2 French learners' acquisition of the past participle agreement in relative clauses and their comprehension of three texts in which the target forms were embedded.…

Effects of Lexical Features, Textual Properties, and Individual Differences on Word Processing Times during Second Language Reading Comprehension

Science.gov (United States)

Kim, Minkyung; Crossley, Scott A.; Skalicky, Stephen

2018-01-01

This study examines whether lexical features and textual properties along with individual differences on the part of readers influence word processing times during second language (L2) reading comprehension. Forty-eight Spanish-speaking adolescent and adult learners of English read nine English passages in a self-paced word-by-word reading…

Intervenção fonoaudiológica com gêneros textuais em um grupo de escolares Speech Therapy intervention with textual genders in a group of school age children

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Ane Caroline Brisch Schneider

2010-04-01

Full Text Available TEMA: terapia com gêneros textuais em um grupo de escolares. OBJETIVOS: analisar os resultados terapêuticos a partir da introdução de gêneros textuais como funcionamento terapêutico em um grupo de escolares com queixa de distúrbios de aquisição da linguagem escrita. PROCEDIMENTOS: participaram deste estudo cinco sujeitos, matriculados na 5ª ou 6ª série do ensino fundamental, em escolas distintas da rede pública de ensino da cidade de Santa Maria/RS, com idade entre 10 e 13 anos e histórico de fracasso escolar e repetência. A análise da produção textual com temática livre foi realizada por meio do protocolo de Lubian (2007. A intervenção terapêutica se deu entre setembro de 2007 e junho de 2008. Ao término do trabalho terapêutico a produção textual foi novamente analisada segundo o mesmo protocolo. RESULTADOS: o trabalho com gêneros textuais facilitou a motivação para ler e escrever e teve, como consequência, a melhoria da progressão e coesão textuais, além da adequação dos aspectos formais da escrita como ortografia e pontuação. O trabalho em grupo foi essencial para que os integrantes pudessem ressignificar os sentidos atribuídos à queixa a partir de constante diálogo com troca de experiências de situações escolares e familiares. CONCLUSÃO: a terapia com gêneros textuais foi motivador para outras práticas de leitura e escrita no grupo estudado. Além disso, o estudo de casos demonstra que não se tratam de distúrbios, mas práticas de letramento insuficientes.BACKGROUND: therapy with textual genders in a group of school children. PURPOSE: to analyze the therapeutic results from the introduction of textual genders as a therapeutical tool in a group of children with difficulties in the acquisition of written language. PROCEDURES: five children enrolled in 5th and 6th grades in distinct schools of public education in the city of Santa Maria/RS, age group ranging between 10 and 13 years and a school

Improving probe set selection for microbial community analysis by leveraging taxonomic information of training sequences

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Jiang Tao

2011-10-01

Full Text Available Abstract Background Population levels of microbial phylotypes can be examined using a hybridization-based method that utilizes a small set of computationally-designed DNA probes targeted to a gene common to all. Our previous algorithm attempts to select a set of probes such that each training sequence manifests a unique theoretical hybridization pattern (a binary fingerprint to a probe set. It does so without taking into account similarity between training gene sequences or their putative taxonomic classifications, however. We present an improved algorithm for probe set selection that utilizes the available taxonomic information of training gene sequences and attempts to choose probes such that the resultant binary fingerprints cluster into real taxonomic groups. Results Gene sequences manifesting identical fingerprints with probes chosen by the new algorithm are more likely to be from the same taxonomic group than probes chosen by the previous algorithm. In cases where they are from different taxonomic groups, underlying DNA sequences of identical fingerprints are more similar to each other in probe sets made with the new versus the previous algorithm. Complete removal of large taxonomic groups from training data does not greatly decrease the ability of probe sets to distinguish those groups. Conclusions Probe sets made from the new algorithm create fingerprints that more reliably cluster into biologically meaningful groups. The method can readily distinguish microbial phylotypes that were excluded from the training sequences, suggesting novel microbes can also be detected.

Improving probe set selection for microbial community analysis by leveraging taxonomic information of training sequences.

Science.gov (United States)

Ruegger, Paul M; Della Vedova, Gianluca; Jiang, Tao; Borneman, James

2011-10-10

Population levels of microbial phylotypes can be examined using a hybridization-based method that utilizes a small set of computationally-designed DNA probes targeted to a gene common to all. Our previous algorithm attempts to select a set of probes such that each training sequence manifests a unique theoretical hybridization pattern (a binary fingerprint) to a probe set. It does so without taking into account similarity between training gene sequences or their putative taxonomic classifications, however. We present an improved algorithm for probe set selection that utilizes the available taxonomic information of training gene sequences and attempts to choose probes such that the resultant binary fingerprints cluster into real taxonomic groups. Gene sequences manifesting identical fingerprints with probes chosen by the new algorithm are more likely to be from the same taxonomic group than probes chosen by the previous algorithm. In cases where they are from different taxonomic groups, underlying DNA sequences of identical fingerprints are more similar to each other in probe sets made with the new versus the previous algorithm. Complete removal of large taxonomic groups from training data does not greatly decrease the ability of probe sets to distinguish those groups. Probe sets made from the new algorithm create fingerprints that more reliably cluster into biologically meaningful groups. The method can readily distinguish microbial phylotypes that were excluded from the training sequences, suggesting novel microbes can also be detected.

Frequency shifting approach towards textual transcription of heartbeat sounds.

Science.gov (United States)

Arvin, Farshad; Doraisamy, Shyamala; Safar Khorasani, Ehsan

2011-10-04

Auscultation is an approach for diagnosing many cardiovascular problems. Automatic analysis of heartbeat sounds and extraction of its audio features can assist physicians towards diagnosing diseases. Textual transcription allows recording a continuous heart sound stream using a text format which can be stored in very small memory in comparison with other audio formats. In addition, a text-based data allows applying indexing and searching techniques to access to the critical events. Hence, the transcribed heartbeat sounds provides useful information to monitor the behavior of a patient for the long duration of time. This paper proposes a frequency shifting method in order to improve the performance of the transcription. The main objective of this study is to transfer the heartbeat sounds to the music domain. The proposed technique is tested with 100 samples which were recorded from different heart diseases categories. The observed results show that, the proposed shifting method significantly improves the performance of the transcription.

Frequency shifting approach towards textual transcription of heartbeat sounds

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Safar Khorasani Ehsan

2011-10-01

Full Text Available Abstract Auscultation is an approach for diagnosing many cardiovascular problems. Automatic analysis of heartbeat sounds and extraction of its audio features can assist physicians towards diagnosing diseases. Textual transcription allows recording a continuous heart sound stream using a text format which can be stored in very small memory in comparison with other audio formats. In addition, a text-based data allows applying indexing and searching techniques to access to the critical events. Hence, the transcribed heartbeat sounds provides useful information to monitor the behavior of a patient for the long duration of time. This paper proposes a frequency shifting method in order to improve the performance of the transcription. The main objective of this study is to transfer the heartbeat sounds to the music domain. The proposed technique is tested with 100 samples which were recorded from different heart diseases categories. The observed results show that, the proposed shifting method significantly improves the performance of the transcription.

Taxonomic significance of cypsela morphology for the tribe mutisieae (s.l.) (asteraceae) from Pakistan

International Nuclear Information System (INIS)

Abid, R.; Alam, J.

2011-01-01

Cypselas of 5 species distributed in 3 genera of the tribe Mutisieae (s.l.) were examined from Pakistan to assess their taxonomic significance. Micro morphological characters of cypsela including shape, pappus and carpopodium have been proved very rewarding to evaluate the taxonomic decisions both at the generic and specific levels. (author)

Textual emotion recognition for enhancing enterprise computing

Science.gov (United States)

Quan, Changqin; Ren, Fuji

2016-05-01

The growing interest in affective computing (AC) brings a lot of valuable research topics that can meet different application demands in enterprise systems. The present study explores a sub area of AC techniques - textual emotion recognition for enhancing enterprise computing. Multi-label emotion recognition in text is able to provide a more comprehensive understanding of emotions than single label emotion recognition. A representation of 'emotion state in text' is proposed to encompass the multidimensional emotions in text. It ensures the description in a formal way of the configurations of basic emotions as well as of the relations between them. Our method allows recognition of the emotions for the words bear indirect emotions, emotion ambiguity and multiple emotions. We further investigate the effect of word order for emotional expression by comparing the performances of bag-of-words model and sequence model for multi-label sentence emotion recognition. The experiments show that the classification results under sequence model are better than under bag-of-words model. And homogeneous Markov model showed promising results of multi-label sentence emotion recognition. This emotion recognition system is able to provide a convenient way to acquire valuable emotion information and to improve enterprise competitive ability in many aspects.

Information Literacy on the Web: How College Students Use Visual and Textual Cues to Assess Credibility on Health Websites

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Katrina L. Pariera

2012-12-01

Full Text Available One of the most important literacy skills in today’s information society is the ability to determine the credibility of online information. Users sort through a staggering number of websites while discerning which will provide satisfactory information. In this study, 70 college students assessed the credibility of health websites with a low and high design quality, in either low or high credibility groups. The study’s purpose was to understand if students relied more on textual or visual cues in determining credibility, and to understand if this affected their recall of those cues later. The results indicate that when viewing a high credibility website, high design quality will bolster the credibility perception, but design quality will not compensate for a low credibility website. The recall test also indicated that credibility does impact the participants’ recall of visual and textual cues. Implications are discussed in light of the Elaboration Likelihood Model.

Low Functional β-Diversity Despite High Taxonomic β-Diversity among Tropical Estuarine Fish Communities

Science.gov (United States)

Villéger, Sébastien; Miranda, Julia Ramos; Hernandez, Domingo Flores; Mouillot, David

2012-01-01

The concept of β-diversity, defined as dissimilarity among communities, has been widely used to investigate biodiversity patterns and community assembly rules. However, in ecosystems with high taxonomic β-diversity, due to marked environmental gradients, the level of functional β-diversity among communities is largely overlooked while it may reveal processes shaping community structure. Here, decomposing biodiversity indices into α (local) and γ (regional) components, we estimated taxonomic and functional β-diversity among tropical estuarine fish communities, through space and time. We found extremely low functional β-diversity values among fish communities (diversities, α and γ functional diversities were very close to the minimal value. These patterns were caused by two dominant functional groups which maintained a similar functional structure over space and time, despite the strong dissimilarity in taxonomic structure along environmental gradients. Our findings suggest that taxonomic and functional β-diversity deserve to be quantified simultaneously since these two facets can show contrasting patterns and the differences can in turn shed light on community assembly rules. PMID:22792395

High taxonomic variability despite stable functional structure across microbial communities.

Science.gov (United States)

Louca, Stilianos; Jacques, Saulo M S; Pires, Aliny P F; Leal, Juliana S; Srivastava, Diane S; Parfrey, Laura Wegener; Farjalla, Vinicius F; Doebeli, Michael

2016-12-05

Understanding the processes that are driving variation of natural microbial communities across space or time is a major challenge for ecologists. Environmental conditions strongly shape the metabolic function of microbial communities; however, other processes such as biotic interactions, random demographic drift or dispersal limitation may also influence community dynamics. The relative importance of these processes and their effects on community function remain largely unknown. To address this uncertainty, here we examined bacterial and archaeal communities in replicate 'miniature' aquatic ecosystems contained within the foliage of wild bromeliads. We used marker gene sequencing to infer the taxonomic composition within nine metabolic functional groups, and shotgun environmental DNA sequencing to estimate the relative abundances of these groups. We found that all of the bromeliads exhibited remarkably similar functional community structures, but that the taxonomic composition within individual functional groups was highly variable. Furthermore, using statistical analyses, we found that non-neutral processes, including environmental filtering and potentially biotic interactions, at least partly shaped the composition within functional groups and were more important than spatial dispersal limitation and demographic drift. Hence both the functional structure and taxonomic composition within functional groups of natural microbial communities may be shaped by non-neutral and roughly separate processes.

Translation Competence and Translation Performance: Lexical, Syntactic and Textual Patterns in Student Translations of a Specialized EU Genre

Science.gov (United States)

Karoly, Adrienn

2012-01-01

This paper reports the findings of a study aiming to reveal the recurring patterns of lexical, syntactic and textual errors in student translations of a specialized EU genre from English into Hungarian. By comparing the student translations to the official translation of the text, this article uncovers the most frequent errors that students made…

Texture, Textuality and Political Discourse: A Study of Lexical Cohesion in Nigeria's President Goodluck Jonathan's Inaugural Address, May, 2011

Science.gov (United States)

Enyi, Amaechi Uneke; Chitulu, Mark Ononiwu

2015-01-01

This study, entitled, "Texture and textuality in Political Discourse: A Study of Cohesive Devices in President Goodluck Jonathan's Inaugural Address-May, 2011" was an analysis of the lexical cohesive devices employed by Nigeria's President Goodluck Jonathan in crafting his May, 2011's Presidential Inaugural Address (PIA). Guided by the…

Harm reduction in U.S. tobacco control: Constructions in textual news media.

Science.gov (United States)

Eversman, Michael H

2015-06-01

U.S. tobacco control has long emphasized abstinence, yet quitting smoking is hard and cessation rates low. Tobacco harm reduction alternatives espouse substituting cigarettes with safer nicotine and tobacco products. Policy shifts embracing tobacco harm reduction have increased media attention, yet it remains controversial. Discourse theory posits language as fluid, and socially constructed meaning as neither absolute nor neutral, elevating certain views over others while depicting "discursive struggle" between them. While an abstinence-based framework dominates tobacco policy, discourse theory suggests constructions of nicotine and tobacco use can change, for example by positioning tobacco harm reduction more favorably. Textual discourse analysis was used to explore constructions of tobacco harm reduction in 478 (308 original) U.S. textual news media articles spanning 1996-2014. Using keyword database sampling, retrieved articles were analyzed first as discrete recording units and then to identify emergent thematic content. Constructions of tobacco harm reduction shifted over this time, revealing tension among industry and policy interests through competing definitions of tobacco harm reduction, depictions of its underlying science, and accounts of regulatory matters including tobacco industry support for harm reduction and desired marketing and taxation legislation. Heightened salience surrounding tobacco harm reduction and electronic cigarettes suggests their greater acceptance in U.S. tobacco control. Various media depictions construct harm reduction as a temporary means to cessation, and conflict with other constructions of it that place no subjective value on continued "safer" tobacco/nicotine use. Constructions of science largely obscure claims of the veracity of tobacco harm reduction, with conflict surrounding appropriate public health benchmarks for tobacco policy and health risks of nicotine use. Taxation policies and e-cigarette pricing relative to

Textual Self-branding: the Rhetorical Ethos in Mallarmé’s Divagations

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Arild Michel Bakken

2011-11-01

Full Text Available This article examines, from a rhetorical perspective, the textual presence of the auctorial figure in Mallarmé’s collection of prose writings, Divagations. It challenges the traditional and structuralist idea of Mallarmé as a poet eager to exclude his own persona from his work, and even as the initiator of the “death of the author.” Recent Mallarméan studies have been shifting the field’s attention away from the myth of the ivory tower to focus on the poet’s social project as it appears in the Divagations. Such a project presupposes a rhetorical commitment, and thus an auctorial presence in the text. The question that is raised here is then what role the figure of the poet plays in Mallarmé’s rhetorical strategy. A close rhetorical analysis of the Divagations reveals that the poet constantly, although discreetly, writes his own persona into the text. Throughout the Divagations, Mallarmé deploys much effort to give his persona qualities likely to win the support of his audience. It is argued that this manifest ethos preoccupation has a double function. The rhetorically efficient image of the poet is obviously intended to add authority to his social project. However, the poet’s constant cultivation of his textual figure shows that the ethos has gained a certain autonomy. An important preoccupation for the poet is in fact to brand himself as an author: contrary to the traditional idea of the absent poet, the auctorial figure seems to be one of the primary subjects of the Divagations. The argument thus invites us, in order to avoid overlooking this central aspect of Mallarmé’s project, to take the ethos perspective into account in any approach to Mallarmé’s prose work.

Caudal léxico en alumnos universitarios : Implicancias para la interacción textual

OpenAIRE

Piatti, Vanesa; Fernicola, Alfredo; Melillo, Oscar Roberto; Peralta, Diego

2011-01-01

En este trabajo se comunican los resultados preliminares de una investigación en curso. Específicamente se refiere a los resultados encontrados en pruebas de que examinan el caudal léxico, por el interés de sus relaciones con la interacción textual. En razón de ello en la elaboración de esta comunicación se ha tenido particularmente en cuenta el modelo de comprensión lectora proporcionado por Kintsch y Rawson (2005) sobre los diferentes niveles de procesamiento cuando se lee. Los autores d...

Hypertext in Secondary School in Chile: ¿It is pertinent apply traditional textual approaches?

OpenAIRE

Ayala Pérez, Teresa

2012-01-01

Los textos digitales constituyen parte importante de la comunicación en la sociedad de la información y recientemente han sido incluidos en los programas de Lenguaje y Comunicación de E.M. en Chile. Ante esta situación, cabe preguntarse si los tradicionales enfoques textuales, elaborados a partir del texto impreso en los años 70 y 80 y utilizados actualmente en Enseñanza Media, resultan aplicables al hipertexto. En este trabajo se describen algunos rasgos de este tipo de texto y se reflexiona...

Interpretive analysis of the textual codes in the Parrot and Merchant story

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Zohreh Najafi

2016-06-01

Full Text Available Abstract Narratology is a brunch of semiology which considers any kind of narrative, literary or non literary, verbal or visual, story or non story and after this specifies the plot. One of the most important subjects in narratology is the interpretation of textual cods which based on can be understood a lot of hidden meanings. Molavi expresses a lot of mystic points in Mathnavi in narrative form which some of his ideas can be realized in the first study but these ideas aren’t all of subjects which he wants to say and a complex of different meaning is hidden in any narrative which can be revealed by consideration of cods.     In terminology of semiology, code is a special situation in historical process of all of indexes and signs which specified for synchronized analyze. In review of literary texts textual cods are more important. Textual cods are the cods which their ambit is more extended than few special text and links these texts to each other in an interpretational form. Aesthetic cods are a group of textual cods which are used in different arts like: poem, painting, theater, music and so on.       The style of expression of aesthetic cods is the same style of art and literature. In the review of Mathnavi's narratives paying attention to narrative cods and using them can be considered as paralinguistic signs. Narrative cods contain interpretational form which used by authors and commentators of texts. In the story of parrot and merchant the textual cods are as follows:   - Parrot: in this story parrot is a symbolic code which shows all of human soul's features.   - Merchant: in this story merchant act as a cultural code which indicates rich who always are solicitous about their finance and are unaware of spiritual world.    - India: in this story India as a signifier code indicates spiritual world. Hermeneutic cods   Molana uses codes which act as turning point and addressed can understand hidden meanings which haven�

El método micro-textual como herramienta de análisis de foros en línea en contextos multiculturales

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Marcelo I. Dorfsman

2016-01-01

Full Text Available En este trabajo presentaremos el método micro-textual, como una herramienta eficiente de análisis en la investigación que se está desarrollando sobre enseñanza en línea y multiculturalidad en la Educación Superior, en el Centro Melton de Educación Judía de la Universidad Hebrea de Jerusalem. El propósito del trabajo es mostrar de qué manera el método posibilita identificar y caracterizar diferentes tipos de diálogo en los foros en línea, y asimismo examinar su evolución. El método está constituido por una batería conceptual desarrollada para el análisis de textos y su objetivo es contribuir a la comprensión del discurso textual e intertextual y su evolución en cursos virtuales, en particular en la enseñanza superior. El mismo utiliza componentes textuales y contextuales para la comprensión de textos, siendo un componente central el indicador etno-cultural, vinculado a la pertenencia del participante a un grupo religioso o cultural, y a problemáticas relacionadas con su identidad. En la ejemplificación elegida para este trabajo, propondremos analizar cuestiones vinculadas a la interrelación entre los indicadores personales, profesionales y los etno-culturales; así como también al rol del docente en la educación superior en línea.

Itinerarios textuales del "Quijote" en América (siglos XVII a XIX

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Eva Marìa Valero Juan

2013-12-01

Full Text Available Starting with a brief description of the journey taken by the first editions of the Quixote which were sent to America, this article aims to review the textual biography of don Quixote in America between the 17th and 19th centuries. This selective review starts with the accounts of popular festivities that give evidence of the first appearances of don Quixote and Sancho in the texts. The selection of texts goes from 1607 to the Spanish Emancipation century, paying particular attention to its final years, with the analysis of some of the texts that Ruben Dario devoted to the Quixote, and of the rise of Don Quixote as a Spanish American symbol of identity.

How strong is your coffee? : The influence of visual metaphors and textual claims on consumers' flavor perception and product evaluation

NARCIS (Netherlands)

Fenko, Anna; de Vries, Roxan; van Rompay, Thomas

2018-01-01

This study investigates the relative impact of textual claims and visual metaphors displayed on the product's package on consumers' flavor experience and product evaluation. For consumers, strength is one of the most important sensory attributes of coffee. The 2 × 3 between-subjects experiment (N =

de análisis textual cinematográfico

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Fernando Vizcarra

2011-01-01

Full Text Available Se presenta un análisis textual del filme futurista Blade Runner (1982, de Ridley Scott. Busca, sobre todo, indagar cómo se representan los efectos radicalizados de la modernidad en el discurso cinematográfico y, concretamente, en la construcción fílmica de las identidades. ¿Qué elementos de representación de lo social se movilizan en esta película para expresar, mediante la ficción futurista, las consecuencias críticas de la modernidad en las sociedades contemporáneas? Ciertos componentes de la modernidad y la posmodernidad (que aquí trato como modernidades múltiples, tales como la expansión de la racionalidad y la consecuente crisis de sentido, las rearticulaciones del tiempo y del espacio, la creación de entornos de fiabilidad y riesgo, y los procesos de hibridación, se exploran en este ejercicio a la luz de los siguientes códigos identitarios revelados en Blade Runner: 1 mortalidad, 2 memoria y poder, 3 anomia y sentido, 4 solidaridad y 5 ironía.

Assessing Online Textual Feedback to Support Student Intrinsic Motivation Using a Collaborative Text-Based Dialogue System: A Qualitative Study

Science.gov (United States)

Shroff, Ronnie H.; Deneen, Christopher

2011-01-01

This paper assesses textual feedback to support student intrinsic motivation using a collaborative text-based dialogue system. A research model is presented based on research into intrinsic motivation, and the specific construct of feedback provides a framework for the model. A qualitative research methodology is used to validate the model.…

Estudio de las técnicas de detección de plagio textual y análisis de sinonimia en ensayos y desarrollo de un sistema prototipo

OpenAIRE

Flores Vega, Andrea Elizabeth; León Ullauri, Benito Bernardo

2012-01-01

Entendemos como plagio la inserción de ideas que no nos pertenecen y darlas como nuestras al no reconocer mediante citas referenciales a los autores originales de un texto sobre el cual nos basamos para sustentar nuestros trabajos. Existen varias formas de plagio, sin embargo en nuestro trabajo nos hemos enfocado en analizar plagio textual y plagio por sinonimia. Se considera que el plagio textual es la forma más común y fácil de plagio. Consiste en copiar desde un documento ajeno ideas sin c...

Write like a visual artist: Tracing the textually mediated art world

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Janna Klostermann

2016-12-01

Full Text Available This study examines the social organisation of Canada’s art world from the standpoint of practising visual artists. Bringing together theories of literacy and institutional ethnography, the article investigates the literacy practices of visual artists, making visible how artists use written texts to participate in public galleries and in the social and institutional relations of the art world. Drawing on extended ethnographic research, including interviews, observational field notes and textual analyses, this study sheds light on the ways visual artists enact particular texts, enact organisational processes, and to enact the social and conceptual worlds they are a part of. Through the lens of visual artists, this study locates two particular texts – the artist statement and the bio statement – in the extended social and institutional relations of the art world.

Functional and Taxonomic Differentiation of Macrophyte Assemblages Across the Yangtze River Floodplain Under Human Impacts.

Science.gov (United States)

Zhang, Min; García Molinos, Jorge; Zhang, Xiaolin; Xu, Jun

2018-01-01

Human activities and the consequent extirpations of species have been changing the composition of species assemblages worldwide. These anthropogenic impacts alter not only the richness of assemblages but also the biological dissimilarity among them. One of the main gaps in the assessment of biodiversity change in freshwater ecosystems is our limited understanding regarding how taxonomic and functional facets of macrophyte assemblages respond to human impacts on regional scales. Here, we assess the temporal (before 1970s against after 2000s) changes in taxonomic and functional richness and compositional dissimilarities, partitioned into its turnover and nestedness components, of freshwater macrophyte assemblages across the floodplain lakes of the Yangtze River in China. We found that functional and taxonomic assemblage differentiation occurred simultaneously under increasing human impact, concomitant to a general decrease in functional and taxonomic richness. However, this effect weakened when the historical level of taxonomic dissimilarity among assemblages was high. Macrophyte species with large dispersal range and submersed life form were significantly more susceptible to extirpation. The impact of human activities on differentiation was complex but habitat loss and fishery intensity were consistently the main drivers of assemblage change in these lakes, whereas water quality (i.e., light pollution and nutrient enrichment) had weaker effects. Further, macrophyte taxonomic and functional differentiation was mainly driven by the nestedness component of dissimilarity, accounting for changes in assemblage composition related to changes in species richness independent of species replacement. This result, markedly different from previous studies on freshwater fish assemblages conducted in these lakes, represents a novel contribution toward achieving a more holistic understanding of how human impacts contribute to shape community assemblages in natural ecosystems.

Taxonomic and phylogenetic utility of variation in advertising calls of ...

African Journals Online (AJOL)

Taxonomic and phylogenetic utility of variation in advertising calls of francolins and spurfowls (Galliformes: Phasianidae). Tshifhiwa G. Mandiwana-Neudani, Rauri C.K. Bowie, Martine Hausberger, Laurence Henry, Timothy M. Crowe ...

Taxonomic status and conservation importance of the avifauna of ...

African Journals Online (AJOL)

Democratic Republic of Congo) focussed on the status of 56 taxa, to reveal a high endemism (14 species of a total of at least 642). In addition, 33 taxa were also revealed as possible south-central African endemics but need thorough taxonomic ...

Shifting Norms and Expectations for Medical School Leaders: A Textual Analysis of Career Advertisements 2000-2004 cf. 2010-2014

Science.gov (United States)

Gorsky, Diane; MacLeod, Anna

2016-01-01

Leadership norms and expectations are continually evolving in higher education. Medical education is no exception to that trend, but shifts over time are intangible and difficult to measure. To explore emerging changes, the authors conducted a textual analysis of published career advertisements from 2000-2004 and 2010-2014. While a number of…

A taxonomic synopsis of Altingiaceae with nine new combinations

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Stefanie Ickert-Bond

2013-12-01

Full Text Available A taxonomic synopsis of the Altingiaceae is presented, including the taxonomic enumeration and distribution of 15 recognized species based on studies of 1,500 specimens from 24 herbaria throughout the distributional range of the taxa. Previous phylogenetic analyses based on several molecular markers have shown that Altingia and Semiliquidambar are nested within Liquidambar. All Altingia and Semiliquidambar species are now formally transferred to Liquidambar, which has the nomenclatural priority. The following nine new combinations are herein made: Liquidambar cambodiana (Lecomte Ickert-Bond & J. Wen, L. caudata (H. T. Chang Ickert-Bond & J. Wen, L. chingii (Metcalf Ickert-Bond & J. Wen, L. gracilipes (Hemsl. Ickert-Bond & J. Wen, L. multinervis (Cheng Ickert-Bond & J. Wen, L. obovata (Merrill & Chun Ickert-Bond & J. Wen, L. poilanei (Tardieu Ickert-Bond & J. Wen, L. siamensis (Craib Ickert-Bond & J. Wen, and L. yunnanensis (Rehder & Wilson Ickert-Bond & J. Wen.

A Cross Cultural Analysis of Textual and Interpersonal Metadiscourse Markers: The Case of Economic Articles in English and Persian Newspapers

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Abbas Mehrabi Boshrabadi

2014-04-01

Full Text Available This study was an attempt to investigate the functional role of textual and interpersonal metadiscourse markers in English and Persian Economic news reports. To this end, 10 news articles, 5 in each language, were randomly selected from the Economic sections of the leading newspapers published in 2013-2014 in Iran and the United States. Based on Kopple’s (1985 taxonomy, the type and frequency of metadiscourse markers used in the texts were analyzed to find out their functions in the text. The findings revealed that the textual markers used by Persian authors were considerably more frequent than those employed by the American writers. Interestingly, unlike the Persian writers, the American authors enlisted a larger number of interpersonal markers, which made their angle of the subject treatment different. It is evident that the differential use of metadiscourse markers by nationally different authors could be attributed to culture-specific norms governing the development and organization of discourse.

Identification and conservation application of signal, noise, and taxonomic effects in diversity patterns

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Fleishman, E.

2005-01-01

Full Text Available Ongoing research on butterflies and birds in the Great Basin has identified biogeographic patterns while elucidating how dynamic measures of diversity (species richness and turnover affect inferences for conservation planning and adaptive management. Nested subsets analyses suggested that processes influencing predictability of assemblage composition differ among taxonomic groups, and the relative importance of those processes may vary spatially within a taxonomic group. There may be a time lag between deterministic environmental changes and a detectable faunal response, even for taxonomic groups that are known to be sensitive to changes in climate and land cover. Measures of beta diversity were sensitive to correlations between sampling resolution and local environmental heterogeneity. Temporal and spatial variation in species composition indicated that spatially extensive sampling is more effective for drawing inferences about biodiversity responses to environmental change than intensive sampling at relatively few, smaller sites.

TaxMan: a taxonomic database manager

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Blaxter Mark

2006-12-01

Full Text Available Abstract Background Phylogenetic analysis of large, multiple-gene datasets, assembled from public sequence databases, is rapidly becoming a popular way to approach difficult phylogenetic problems. Supermatrices (concatenated multiple sequence alignments of multiple genes can yield more phylogenetic signal than individual genes. However, manually assembling such datasets for a large taxonomic group is time-consuming and error-prone. Additionally, sequence curation, alignment and assessment of the results of phylogenetic analysis are made particularly difficult by the potential for a given gene in a given species to be unrepresented, or to be represented by multiple or partial sequences. We have developed a software package, TaxMan, that largely automates the processes of sequence acquisition, consensus building, alignment and taxon selection to facilitate this type of phylogenetic study. Results TaxMan uses freely available tools to allow rapid assembly, storage and analysis of large, aligned DNA and protein sequence datasets for user-defined sets of species and genes. The user provides GenBank format files and a list of gene names and synonyms for the loci to analyse. Sequences are extracted from the GenBank files on the basis of annotation and sequence similarity. Consensus sequences are built automatically. Alignment is carried out (where possible, at the protein level and aligned sequences are stored in a database. TaxMan can automatically determine the best subset of taxa to examine phylogeny at a given taxonomic level. By using the stored aligned sequences, large concatenated multiple sequence alignments can be generated rapidly for a subset and output in analysis-ready file formats. Trees resulting from phylogenetic analysis can be stored and compared with a reference taxonomy. Conclusion TaxMan allows rapid automated assembly of a multigene datasets of aligned sequences for large taxonomic groups. By extracting sequences on the basis of

Extracting the Textual and Temporal Structure of Supercomputing Logs

Energy Technology Data Exchange (ETDEWEB)

Jain, S; Singh, I; Chandra, A; Zhang, Z; Bronevetsky, G

2009-05-26

Supercomputers are prone to frequent faults that adversely affect their performance, reliability and functionality. System logs collected on these systems are a valuable resource of information about their operational status and health. However, their massive size, complexity, and lack of standard format makes it difficult to automatically extract information that can be used to improve system management. In this work we propose a novel method to succinctly represent the contents of supercomputing logs, by using textual clustering to automatically find the syntactic structures of log messages. This information is used to automatically classify messages into semantic groups via an online clustering algorithm. Further, we describe a methodology for using the temporal proximity between groups of log messages to identify correlated events in the system. We apply our proposed methods to two large, publicly available supercomputing logs and show that our technique features nearly perfect accuracy for online log-classification and extracts meaningful structural and temporal message patterns that can be used to improve the accuracy of other log analysis techniques.

Automatic processing of semantic relations in fMRI: neural activation during semantic priming of taxonomic and thematic categories.

Science.gov (United States)

Sachs, Olga; Weis, Susanne; Zellagui, Nadia; Huber, Walter; Zvyagintsev, Mikhail; Mathiak, Klaus; Kircher, Tilo

2008-07-07

Most current models of knowledge organization are based on hierarchical or taxonomic categories (animals, tools). Another important organizational pattern is thematic categorization, i.e. categories held together by external relations, a unifying scene or event (car and garage). The goal of this study was to compare the neural correlates of these categories under automatic processing conditions that minimize strategic influences. We used fMRI to examine neural correlates of semantic priming for category members with a short stimulus onset asynchrony (SOA) of 200 ms as subjects performed a lexical decision task. Four experimental conditions were compared: thematically related words (car-garage); taxonomically related (car-bus); unrelated (car-spoon); non-word trials (car-derf). We found faster reaction times for related than for unrelated prime-target pairs for both thematic and taxonomic categories. However, the size of the thematic priming effect was greater than that of the taxonomic. The imaging data showed signal changes for the taxonomic priming effects in the right precuneus, postcentral gyrus, middle frontal and superior frontal gyri and thematic priming effects in the right middle frontal gyrus and anterior cingulate. The contrast of neural priming effects showed larger signal changes in the right precuneus associated with the taxonomic but not with thematic priming response. We suggest that the greater involvement of precuneus in the processing of taxonomic relations indicates their reduced salience in the knowledge structure compared to more prominent thematic relations.

Taxonomical analysis of the Cancer cluster of galaxies

International Nuclear Information System (INIS)

Perea, J.; Olmo, A. del; Moles, M.

1986-01-01

A description is presented of the Cancer cluster of galaxies, based on a taxonomical analysis in (α,delta, Vsub(r)) space. Earlier results by previous authors on the lack of dynamical entity of the cluster are confirmed. The present analysis points out the existence of a binary structure in the most populated region of the complex. (author)

Relação entre leitura de palavras isoladas e compreensão de leitura textual em crianças

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Corso, Helena Vellinho

2009-01-01

Full Text Available Dentre os inúmeros processos que se inter-relacionam durante a atividade da leitura, o reconhecimento das palavras e a compreensão do que é reconhecido são identificados como fundamentais. Uma das perspectivas expostas na literatura é a de que a fluência na leitura de palavras é condição fundamental para a compreensão da leitura, embora não suficiente, posto que a leitura eficiente de palavras não garante a compreensão de leitura textual. O presente trabalho examinou também a possibilidade inversa, a saber: é possível haver uma boa compreensão textual apesar de fracas habilidades de leitura de palavras? A pesquisa comparou o desempenho de crianças de 2ª série do EF em leitura de palavras isoladas e em compreensão de leitura textual, investigando, assim, as correlações e a possibilidade de dissociações entre estes dois processos. A análise dos dados mostrou uma forte correlação entre as habilidades em questão. Enquanto foi possível verificar a presença de algumas crianças com competência no reconhecimento de palavras e com baixa capacidade de compreensão de texto, os dados não sugerem uma dissociação visível no sentido inverso, ou seja, categorias altas de compreensão de texto apesar de baixos escores em leitura de palavras isoladas. Implicações para intervenção clínica e educacional são discutidas

Improved taxonomic assignment of human intestinal 16S rRNA sequences by a dedicated reference database

NARCIS (Netherlands)

Ritari, Jarmo; Salojärvi, Jarkko; Lahti, Leo; Vos, de Willem M.

2015-01-01

Background: Current sequencing technology enables taxonomic profiling of microbial ecosystems at high resolution and depth by using the 16S rRNA gene as a phylogenetic marker. Taxonomic assignation of newly acquired data is based on sequence comparisons with comprehensive reference databases to

Taxonomic and Phylogenetic Determinants of Functional Composition of Bolivian Bat Assemblages.

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Luis F Aguirre

Full Text Available Understanding diversity patterns and the potential mechanisms driving them is a fundamental goal in ecology. Examination of different dimensions of biodiversity can provide insights into the relative importance of different processes acting upon biotas to shape communities. Unfortunately, patterns of diversity are still poorly understood in hyper-diverse tropical countries. Here, we assess spatial variation of taxonomic, functional and phylogenetic diversity of bat assemblages in one of the least studied Neotropical countries, Bolivia, and determine whether changes in biodiversity are explained by the replacement of species or functional groups, or by differences in richness (i.e., gain or loss of species or functional groups. Further, we evaluate the contribution of phylogenetic and taxonomic changes in the resulting patterns of functional diversity of bats. Using well-sampled assemblages from published studies we examine noctilionoid bats at ten study sites across five ecoregions in Bolivia. Bat assemblages differed from each other in all dimensions of biodiversity considered; however, diversity patterns for each dimension were likely structured by different mechanisms. Within ecoregions, differences were largely explained by species richness, suggesting that the gain or loss of species or functional groups (as opposed to replacement was driving dissimilarity patterns. Overall, our results suggest that whereas evolutionary processes (i.e., historical connection and dispersal routes across Bolivia create a template of diversity patterns across the country, ecological mechanisms modify these templates, decoupling the observed patterns of functional, taxonomic and phylogenetic diversity in Bolivian bats. Our results suggests that elevation represents an important source of variability among diversity patterns for each dimension of diversity considered. Further, we found that neither phylogenetic nor taxonomic diversity can fully account for

Taxonomic and Phylogenetic Determinants of Functional Composition of Bolivian Bat Assemblages.

Science.gov (United States)

Aguirre, Luis F; Montaño-Centellas, Flavia A; Gavilanez, M Mercedes; Stevens, Richard D

2016-01-01

Understanding diversity patterns and the potential mechanisms driving them is a fundamental goal in ecology. Examination of different dimensions of biodiversity can provide insights into the relative importance of different processes acting upon biotas to shape communities. Unfortunately, patterns of diversity are still poorly understood in hyper-diverse tropical countries. Here, we assess spatial variation of taxonomic, functional and phylogenetic diversity of bat assemblages in one of the least studied Neotropical countries, Bolivia, and determine whether changes in biodiversity are explained by the replacement of species or functional groups, or by differences in richness (i.e., gain or loss of species or functional groups). Further, we evaluate the contribution of phylogenetic and taxonomic changes in the resulting patterns of functional diversity of bats. Using well-sampled assemblages from published studies we examine noctilionoid bats at ten study sites across five ecoregions in Bolivia. Bat assemblages differed from each other in all dimensions of biodiversity considered; however, diversity patterns for each dimension were likely structured by different mechanisms. Within ecoregions, differences were largely explained by species richness, suggesting that the gain or loss of species or functional groups (as opposed to replacement) was driving dissimilarity patterns. Overall, our results suggest that whereas evolutionary processes (i.e., historical connection and dispersal routes across Bolivia) create a template of diversity patterns across the country, ecological mechanisms modify these templates, decoupling the observed patterns of functional, taxonomic and phylogenetic diversity in Bolivian bats. Our results suggests that elevation represents an important source of variability among diversity patterns for each dimension of diversity considered. Further, we found that neither phylogenetic nor taxonomic diversity can fully account for patterns of functional

La confusa taxonomía de Cryptosporidium

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Gregorio Pérez-Cordón

2006-10-01

Full Text Available Los últimos descubrimientos en la biología y filogenética de Cryptosporidium refuerzan la necesidad de una exhaustiva revisión del ciclo de vida y la taxonomía de este parásito. Tanto futuros estudios de cultivo in vitro e in vivo así como estudios moleculares y genéticos permitirán avanzar en el profundo conocimiento de este interesante parásito.

[Textual pragmatics in adolescents with attention deficit hyperactivity disorder: argument].

Science.gov (United States)

Gallardo-Paúls, B; Gimeno-Martínez, M; Moreno-Campos, V

2010-03-03

Clinical linguistics involves a study of linguistic deficits which focuses on a series of aspects that range from strictly formal, grammatical points to the effective and contextualised use of language. Thus, it is also inevitably concerned with the cognitive, i.e. mental, correlate of such language use, whose basic textual dimensions are narration and argument. To describe the argumentative skills in adolescents with attention deficit hyperactivity disorder (ADHD) and to examine their relationship with academic achievement and sociability. We analysed 79 argumentative texts written by adolescents with ADHD, using a methodology from cognitive linguistics and from theories of argumentation with a dialogical foundation. Adolescents with ADHD provided a greater number of arguments than those in the control group, but with a higher predominance of emotional and negative sanction strategies compared with a greater use of fallacious or circular arguments in those in the control group; the difference between the use of rational arguments in the two groups is not significant.

Sammas ja labürint: Jüri Ehlvesti tekstuaalsest ruumist. Column and Labyrinth: On Jüri Ehlvest’s Textual Space

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Virve Sarapik

2012-04-01

Full Text Available The purpose of this article is to analyze the connections of spatial relations and settings with narrative, and the presentation of these relations in Jüri Ehlvest’s texts. Distinctions are made between textual space (as designation, description, or rhetorical presentation and fictional space (the space in which narrative action takes place and the site of the denouement of events. Fictional space can be expressed as textual space in one of the four following ways: (a perceived space (b experienced space (c logical space (d alogical space. The multilayeredness of Ehlvest’s texts, their fragmentariness and dislocated reality, entail a complicated reception. In contrast, however, the geographical space represented in the texts is generally quite clear and accessible, with the effect of seeming real and humanly possible. Indeed, specific spatial elements are one of the sources of the verisimilitude and plausibility of Ehlvest’s texts. For the most part, the place where ehlvestian narrative plays itself out is a clear topographical environment, usually an interior; the textual representation of spaces is minimalist, avoiding descriptions, and with practically no impression of movement. In addition to representation of places, rooms, houses, and open space using ordinary, direct, (yet very minimalist means, several more indirect strategies of creating space can be found in Ehlvest’s texts. This article calls attention to some characteristic devices from this indirect repertoire, grouping them as follows: things; window and picture; repetition, fragment, and mirror; body and emptiness. Of the four types of textual space mentioned above, the one most characteristic of Ehlvest’s stories is experienced space, which could also be described as haptic space of experience. However, due to the fragmentariness and bricolage typical of Ehlvest, there are certainly also plenty of examples of the other types, particularly perceived and alogical space

A coesão textual como ferramenta para compreensão de textos em língua inglesa

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Fábio Henrique Rosa Senefonte

2013-12-01

Full Text Available A presente pesquisa ancora-se nos pressupostos de que o sentido do texto é construído pelo leitor e para que isso ocorra, é necessária a ativação de vários conhecimentos, dentre eles o domínio de mecanismos coesivos (KOCH, 2000, 2003, 2004, 2005, 2008; MARCUSCHI, 2008. Dessa forma, o artigo objetiva ilustrar de forma prática como os conhecimentos de coesão textual auxiliam na compreensão de textos em língua inglesa como língua estrangeira. Para isso, foi demonstrado um procedimento metodológico, ancorado na literatura supracitada, para uma possível compreensão de uma notícia extraída do jornal “The New York Times”. Por meio de uma abordagem de leitura instrumental (TODA, 2010, tal procedimento comprovou que a construção de sentido (compreensão do texto foi possível graças à ativação de vários conhecimentos a respeito estratégias de leitura, incluindo o conhecimento acerca de coesão textual.

The social organization of representations of history: the textual accomplishment of coming to terms with the past.

Science.gov (United States)

Tileagă, Cristian

2009-06-01

This paper is concerned with the social organization of collective memory and representations of history in the context of how post-communist democracies reckon with former regimes. It specifically centres on the textual accomplishment of coming to terms with the past in the 'Tismăneanu Report' condemning Communism in Romania. The focus is on how the Report displays and shapes the ideological contours of coming to terms with the past around a particular 'social representation' of history. Several constitutive features of the Report that facilitate bringing off a particular 'representation of history' are identified: (a) the construction of a practical framework for the inquiry as a matter of public concern and attention; (b) the production of 'Communism' as an empirical category with uniquely bound features; and (c) the structuring of time by bringing together a political agenda and national identity. The present argument tries to place representations of history (and coming to terms with the past) as something in need of constitution rather than simply relied on. It is suggested that a conception of coming to terms with the past as a textual accomplishment may lead to a fuller appreciation of the structure, function and salience of representations of history as integral part of moral/political/legal courses of action.

Taxonomic and functional responses to fire and post-fire management of a Mediterranean hymenoptera community.

Science.gov (United States)

Mateos, Eduardo; Santos, Xavier; Pujade-Villar, Juli

2011-11-01

Fire is one of the commonest disturbances worldwide, transforming habitat structure and affecting ecosystem functioning. Understanding how species respond to such environmental disturbances is a major conservation goal that should be monitored using functionally and taxonomically diverse groups such as Hymenoptera. In this respect, we have analyzed the taxonomic and functional response to fire and post-fire management of a Hymenoptera community from a Mediterranean protected area. Thus, Hymenoptera were sampled at fifteen sites located in three burnt areas submitted to different post-fire practices, as well as at five sites located in peripheral unburnt pine forest. A total of 4882 specimens belonging to 33 families, which were classified into six feeding groups according to their dietary preferences, were collected. ANOVA and Redundancy Analyses showed a taxonomic and functional response to fire as all burnt areas had more Hymenoptera families, different community composition and higher numbers of parasitoids than the unburnt area. Taxonomic differences were also found between burnt areas in terms of the response of Hymenoptera to post-fire management. In general the number of parasitoids was positively correlated to the number of potential host arthropods. Parasitoids are recognized to be sensitive to habitat changes, thus highlighting their value for monitoring the functional responses of organisms to habitat disturbance. The taxonomic and functional responses of Hymenoptera suggest that some pine-forest fires can enhance habitat heterogeneity and arthropod diversity, hence increasing interspecific interactions such as those established by parasitoids and their hosts.

Taxonomic and Functional Responses to Fire and Post-Fire Management of a Mediterranean Hymenoptera Community

Science.gov (United States)

Mateos, Eduardo; Santos, Xavier; Pujade-Villar, Juli

2011-11-01

Fire is one of the commonest disturbances worldwide, transforming habitat structure and affecting ecosystem functioning. Understanding how species respond to such environmental disturbances is a major conservation goal that should be monitored using functionally and taxonomically diverse groups such as Hymenoptera. In this respect, we have analyzed the taxonomic and functional response to fire and post-fire management of a Hymenoptera community from a Mediterranean protected area. Thus, Hymenoptera were sampled at fifteen sites located in three burnt areas submitted to different post-fire practices, as well as at five sites located in peripheral unburnt pine forest. A total of 4882 specimens belonging to 33 families, which were classified into six feeding groups according to their dietary preferences, were collected. ANOVA and Redundancy Analyses showed a taxonomic and functional response to fire as all burnt areas had more Hymenoptera families, different community composition and higher numbers of parasitoids than the unburnt area. Taxonomic differences were also found between burnt areas in terms of the response of Hymenoptera to post-fire management. In general the number of parasitoids was positively correlated to the number of potential host arthropods. Parasitoids are recognized to be sensitive to habitat changes, thus highlighting their value for monitoring the functional responses of organisms to habitat disturbance. The taxonomic and functional responses of Hymenoptera suggest that some pine-forest fires can enhance habitat heterogeneity and arthropod diversity, hence increasing interspecific interactions such as those established by parasitoids and their hosts.

Evolutionary history of Leishmania killicki (synonymous Leishmania tropica) and taxonomic implications.

Science.gov (United States)

Chaara, Dhekra; Ravel, Christophe; Bañuls, Anne- Laure; Haouas, Najoua; Lami, Patrick; Talignani, Loïc; El Baidouri, Fouad; Jaouadi, Kaouther; Harrat, Zoubir; Dedet, Jean-Pierre; Babba, Hamouda; Pratlong, Francine

2015-04-01

The taxonomic status of Leishmania (L.) killicki, a parasite that causes chronic cutaneous leishmaniasis, is not well defined yet. Indeed, some researchers suggested that this taxon could be included in the L. tropica complex, whereas others considered it as a distinct phylogenetic complex. To try to solve this taxonomic issue we carried out a detailed study on the evolutionary history of L. killicki relative to L. tropica. Thirty-five L. killicki and 25 L. tropica strains isolated from humans and originating from several countries were characterized using the MultiLocus Enzyme Electrophoresis (MLEE) and the MultiLocus Sequence Typing (MLST) approaches. The results of the genetic and phylogenetic analyses strongly support the hypothesis that L. killicki belongs to the L. tropica complex. Our data suggest that L. killicki emerged from a single founder event and that it evolved independently from L. tropica. However, they do not validate the hypothesis that L. killicki is a distinct complex. Therefore, we suggest naming this taxon L. killicki (synonymous L. tropica) until further epidemiological and phylogenetic studies justify the L. killicki denomination. This study provides taxonomic and phylogenetic information on L. killicki and improves our knowledge on the evolutionary history of this taxon.

Reconsidering the Rhizome: A Textual Analysis of Web Search Engines as Gatekeepers of the Internet

Science.gov (United States)

Hess, A.

Critical theorists have often drawn from Deleuze and Guattari's notion of the rhizome when discussing the potential of the Internet. While the Internet may structurally appear as a rhizome, its day-to-day usage by millions via search engines precludes experiencing the random interconnectedness and potential democratizing function. Through a textual analysis of four search engines, I argue that Web searching has grown hierarchies, or "trees," that organize data in tracts of knowledge and place users in marketing niches rather than assist in the development of new knowledge.

The taxonomic status of giant sengis ( genus Rhynchocyon ) in ...

African Journals Online (AJOL)

The sengis (elephant-shrews) of Mozambique are poorly known, especially the taxonomic status of the giant sengis, genus Rhynchocyon. Currently, Rhynchocyon from Mozambique are thought to be chequered sengis, R. cirnei with specimens from the central coastal areas being placed in the subspecies R. c. cirnei, while ...

Floristic composition and taxonomic distribution of plants in the ...

African Journals Online (AJOL)

Floristic composition and taxonomic distribution of plants in the dryland of Northwestern Nigeria. ... Analysis of abundance and rarity of species reveals that 10% and 90% of the encountered species were abundant and rare respectively in the study area. These finding poses serious ecological concerns in the study area, ...

Analysis of weed flora in conventional and organic potato production

Directory of Open Access Journals (Sweden)

Nikolić, Lj.

2013-12-01

Full Text Available Composition of weed flora is highly dynamic and depends upon great number of factors, of which cultural practices that are applied by humans in certain crops are the most important. One of the most frequently grown plants in the world and in our country is potato (Solanum tuberosum L., Solanaceae, due to its high biological and nutritive value. Therefore, in the paper was presented taxonomic analysis of weed flora in potato grown conventionally and according to the principles of organic agricultural production, with the intention to point out to eventual differences between present weeds. Of the total number of identified species, from phylum Equisetophyta and class Equisetopsida, in organic potato crop, was determined only one, Equisetum arvense. Of remaining 38 weeds from phylum Magnoliophyta., classified into two classes, Magnoliopsida and Liliopsida. On both of potato growing systems, 39 weed species were found, classified into 16 families and 32 genus. Of the total number, 31 species was identified in conventional potato crop, and only 23 species in potato crop grown according to organic principles, which is for about quarter less. Biological spectrum of weed flora in both potato growing systems is pronouncedly of terrophytic – geophytic type. In the spectrum of area types were recorded differences, i.e. in the conventional potato crop represented are only widely distributed species, while in the organic crop, beside species of wide distribution are also present elements of Pontic group.

Concordance and discordance between taxonomic and functional homogenization: responses of soil mite assemblages to forest conversion.

Science.gov (United States)

Mori, Akira S; Ota, Aino T; Fujii, Saori; Seino, Tatsuyuki; Kabeya, Daisuke; Okamoto, Toru; Ito, Masamichi T; Kaneko, Nobuhiro; Hasegawa, Motohiro

2015-10-01

The compositional characteristics of ecological assemblages are often simplified; this process is termed "biotic homogenization." This process of biological reorganization occurs not only taxonomically but also functionally. Testing both aspects of homogenization is essential if ecosystem functioning supported by a diverse mosaic of functional traits in the landscape is concerned. Here, we aimed to infer the underlying processes of taxonomic/functional homogenization at the local scale, which is a scale that is meaningful for this research question. We recorded species of litter-dwelling oribatid mites along a gradient of forest conversion from a natural forest to a monoculture larch plantation in Japan (in total 11 stands), and collected data on the functional traits of the recorded species to quantify functional diversity. We calculated the taxonomic and functional β-diversity, an index of biotic homogenization. We found that both the taxonomic and functional β-diversity decreased with larch dominance (stand homogenization). After further deconstructing β-diversity into the components of turnover and nestedness, which reflect different processes of community organization, a significant decrease in the response to larch dominance was observed only for the functional turnover. As a result, there was a steeper decline in the functional β-diversity than the taxonomic β-diversity. This discordance between the taxonomic and functional response suggests that species replacement occurs between species that are functionally redundant under environmental homogenization, ultimately leading to the stronger homogenization of functional diversity. The insights gained from community organization of oribatid mites suggest that the functional characteristics of local assemblages, which support the functionality of ecosystems, are of more concern in human-dominated forest landscapes.

Antigenic characteristics as taxonomic criterion of differentiation of Alternaria spp., pathogenic for carrot and parsley

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Bulajić Aleksandra R.

2007-01-01

Full Text Available Identification of Alternaria genus species is a very complicated process which demands broadly designed investigations and studying of great number of properties which together can be considered as satisfying taxonomic criteria. The main objective of these investigations was examining the possibilities of applying the antigenic characteristics of Alternaria spp. phytopathogenic fungi as a taxonomic criterion, as well as introducing the serological methods for their identification. Conducting the examination of Alternaria spp., pathogenic for Apiaceae plants in Serbia, several isolates were obtained and identified as Alternaria radicina, A. petroselini, A. dauci and A. alternata, based on the conventional mycological methods and host range, as well as on molecular detection and partial characterization. The investigation included 12 isolates from plant leaves, seeds and soil which were pathogenic mainly to carrot and parsley and were identified as A. radicina, A. petroselini, A. dauci and A. alternate. Investigated isolates were compared with each other, as well as with standard isolates for the mentioned species (a total of 5 isolates, originating from USA and EU. During the investigation of serological characteristics of Alternaria spp. firstly a polyclonal antiserum was prepared against one isolate from Serbia identified as A. dauci. This antiserum was specific to Alternaria genus while there was no reaction with antigens from other phytopathogenic fungi genera (Fusarium, Rhizoctonia and Agaricus. Antiserum titer, determined by slide agglutination test, was 1/32. Antigenic characteristics of Alternaria genus fungi were examined by Electro-Blot-Immunoassay serological method (EBIA, Western blot, i.e. their protein profiles were compared. Investigated Alternaria spp. isolates showed different protein band profiles in gel and on nitrocellulose paper, and the observed differences were in complete correlation with the results of the previous

Main functions and taxonomic distribution of virulence genes in Brucella melitensis 16 M.

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Aniel Jessica Leticia Brambila-Tapia

Full Text Available Many virulence genes have been detected in attenuated mutants of Brucella melitensis 16 M; nevertheless, a complete report of these genes, including the main Cluster of Orthologous Groups (COG represented as well as the taxonomical distribution among all complete bacterial and archaeal genomes, has not been analyzed. In this work a total of 160 virulence genes that have been reported in attenuated mutants in B. melitensis were included and analyzed. Additionally, we obtained 250 B. melitensis randomly selected genes as a reference group for the taxonomical comparisons. The COGs and the taxonomical distribution profile for 789 nonredundant bacterial and archaeal genomes were obtained and compared with the whole-genome COG distribution and with the 250 randomly selected genes, respectively. The main COGs associated with virulence genes corresponded to the following: intracellular trafficking, secretion and vesicular transport (U; cell motility (N; nucleotide transport and metabolism (F; transcription (K; and cell wall/membrane/envelope biogenesis (M. In addition, we found that virulence genes presented a higher proportion of orthologs in the Euryarchaeota and Proteobacteria phyla, with a significant decrease in Chlamydiae, Bacteroidetes, Tenericutes, Firmicutes and Thermotogae. In conclusion, we found that genes related to specific functions are more relevant to B. melitensis virulence, with the COG U the most significant. Additionally, the taxonomical distribution of virulence genes highlights the importance of these genes in the related Proteobacteria, being less relevant in distant groups of organisms with the exception of Euryarchaeota.

Exploratory analysis of textual data from the Mother and Child Handbook using the text-mining method: Relationships with maternal traits and post-partum depression.

Science.gov (United States)

Matsuda, Yoshio; Manaka, Tomoko; Kobayashi, Makiko; Sato, Shuhei; Ohwada, Michitaka

2016-06-01

The aim of the present study was to examine the possibility of screening apprehensive pregnant women and mothers at risk for post-partum depression from an analysis of the textual data in the Mother and Child Handbook by using the text-mining method. Uncomplicated pregnant women (n = 58) were divided into two groups according to State-Trait Anxiety Inventory grade (high trait [group I, n = 21] and low trait [group II, n = 37]) or Edinburgh Postnatal Depression Scale score (high score [group III, n = 15] and low score [group IV, n = 43]). An exploratory analysis of the textual data from the Maternal and Child Handbook was conducted using the text-mining method with the Word Miner software program. A comparison of the 'structure elements' was made between the two groups. The number of structure elements extracted by separated words from text data was 20 004 and the number of structure elements with a threshold of 2 or more as an initial value was 1168. Fifteen key words related to maternal anxiety, and six key words related to post-partum depression were extracted. The text-mining method is useful for the exploratory analysis of textual data obtained from pregnant woman, and this screening method has been suggested to be useful for apprehensive pregnant women and mothers at risk for post-partum depression. © 2016 Japan Society of Obstetrics and Gynecology.

Taxonomic perspective of plant species yielding vegetable oils used ...

African Journals Online (AJOL)

A search conducted to determine the plants yielding vegetable oils resulted in 78 plant species with potential use in cosmetics and skin care products. The taxonomic position of these plant species is described with a description of vegetable oils from these plants and their use in cosmetic and skin care products.

Data composition and taxonomic resolution in macroinvertebrate stream typology

NARCIS (Netherlands)

Verdonschot, P.F.M.

2006-01-01

In the EU water framework directive (WFD) a typological framework is defined for assessing the ecological quality of water bodies in the future. The aim of this study was to test the effect of data composition and taxonomic resolution on this typology. The EU research projects AQEM and STAR provided

Text in context: a textual-linguistic approach to Amos 4: 7-8

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del Barco del Barco, Francisco Javier

2002-12-01

Full Text Available This article will study Amos 4:7-8 from a textlinguistic approach: the form of this section will be analyzed within the structure of the chapter in which it is inserted. Such an analysis is needed because the set of verb forms used seems to be different from the rest of verb forms used in the chapter. While the whole chapter tends to be structured as a brief chain of narrative passages with wayyiqtol, the structure of Amos 4:7-8 seems to be a predictive section -developed through weqatal- inserted or pasted in the middle of the chapter. Translations usually do not note the difference between the set of verb forms used. A textlinguistic analysis of Amos 4:7-8 will show that the kind of discourse used here is different from the one used in the rest of the chapter, and, therefore, this difference should be reflected in the translation. The specific function of some discourse types is also discussed.

En este artículo se presenta un análisis de Amos 4:7-8 a partir de los presupuestos de la lingüística textual. La forma del texto se analizará tomando en cuenta la estructura del capítulo en el que se halla inserto. Este análisis resulta necesario porque el grupo de formas verbales utilizado en la sección propuesta no parece ser el mismo que el del resto del capítulo. Mientras el capítulo en su conjunto es un discurso narrativo estructurado en torno a wayyiqtol, Amos 4:7-8 parece responder al esquema del discurso predictivo desarrollado a partir de weqatal. Un análisis textual se hace necesario porque las traducciones bíblicas no parecen hacerse eco del cambio en el uso de las formas verbales. Además de este análisis, se trata también de la función específica de algunos tipos de discurso.

Machine learning approaches to analysing textual injury surveillance data: a systematic review.

Science.gov (United States)

Vallmuur, Kirsten

2015-06-01

To synthesise recent research on the use of machine learning approaches to mining textual injury surveillance data. Systematic review. The electronic databases which were searched included PubMed, Cinahl, Medline, Google Scholar, and Proquest. The bibliography of all relevant articles was examined and associated articles were identified using a snowballing technique. For inclusion, articles were required to meet the following criteria: (a) used a health-related database, (b) focused on injury-related cases, AND used machine learning approaches to analyse textual data. The papers identified through the search were screened resulting in 16 papers selected for review. Articles were reviewed to describe the databases and methodology used, the strength and limitations of different techniques, and quality assurance approaches used. Due to heterogeneity between studies meta-analysis was not performed. Occupational injuries were the focus of half of the machine learning studies and the most common methods described were Bayesian probability or Bayesian network based methods to either predict injury categories or extract common injury scenarios. Models were evaluated through either comparison with gold standard data or content expert evaluation or statistical measures of quality. Machine learning was found to provide high precision and accuracy when predicting a small number of categories, was valuable for visualisation of injury patterns and prediction of future outcomes. However, difficulties related to generalizability, source data quality, complexity of models and integration of content and technical knowledge were discussed. The use of narrative text for injury surveillance has grown in popularity, complexity and quality over recent years. With advances in data mining techniques, increased capacity for analysis of large databases, and involvement of computer scientists in the injury prevention field, along with more comprehensive use and description of quality

Environmental quality of a stream can be better predicted by phylogenetic than by taxonomic diversity

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Koperski Paweł

2017-01-01

Full Text Available Different indices of taxonomic diversity (TD and phylogenetic diversity (PD of the macrobenthos were compared to determine the efficient predictors of environmental quality (EQ in different types of watercourses in Poland. Archived data of 864 samples of benthic invertebrates identified to the family level were analysed on the basis of linear and non-linear multiply regression. The strengths of the correlations between two measures of EQ:BMWPpl (British Monitoring Working Party score system, Polish modification and MMI (Multimetric Macroinvertebrate Index and the values of taxonomic richness and three well-known TD indices: Shannon, Margalef and J' Evenness were compared to those for values of three PD indices, based on taxonomic distinctness. Taxonomic richness and all PD indices correlated more strongly with both measures of EQ than all TD indices. Correlations with both types of diversity indices were visibly stronger for BMWPpl when compared with MMI. We suggest that analysed indices of PD, especially MDis (mean phylogenetic distance between families in a sample, are related with EQ strongly enough to be taken into account as potential metrics in selection procedures of biological assessment.

Distribution of taxonomic classes and the compositional structure of the astreroid belt

International Nuclear Information System (INIS)

Gradie, J.C.; Tedesco, E.F.

1989-01-01

The distribution of asteroid taxonomic classes and, presumably, actual composition varies systematically with heliocentric distance and is seen qualitatively in the results of a variety of taxonomy methods. In general, the distribution of taxonomic classes is characterized by moderate-albedo asteroids dominant in the inner belt with low-albedo asteroids prevalent in the outer belt and beyond. If the differences in taxonomic classes are assumed to be due to differences in composition, then the asteroid belt can be divided into many compositionally distinct regions defined by peaks and troughs in the distributions of the various classes. Unfortunately, differences in the class definitions used by different classification methods are manifested in the bias-corrected distribution of the classes, which makes detailed interpretation of these trends difficult. UBV color differences among members of the moderate-albedo S class show a distribution in semimajor axis which indicates subgroups in the S class. Explanations of the causes of the overall trends range from primarily dynamical to primarily in situ arrangements of igneous, metamorphic and unaltered primitive material, but a combination of several of these factors may be more likely

Chrysomya albiceps and C. rufifacies (Diptera: Calliphoridae): contribution to an ongoing taxonomic problem.

Science.gov (United States)

Tantawi, T I; Greenberg, B

1993-05-01

Until recently, the two biologically equivalent blow flies Chrysomya albiceps (Wiedemann) and Chrysomya rufifacies (Macquart) had disjunct distributions outside the Americas; the former was Palaearctic, the latter Australasian and Oriental. The two species are now spreading throughout the Americas and coexist in Argentina. The predatory "hairy" larvae of both species are difficult to separate, which could result in taxonomic errors. New diagnostic characters are presented to differentiate the third instars of the two species. The usefulness of the prostigmatic bristle as a diagnostic taxonomic character in distinguishing adults of these species is questioned.

The Impact of Textual Input Enhancement and Explicit Rule Presentation on Iranian Elementary EFL Learners' Intake of Simple Past Tense

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Nahavandi, Naemeh; Mukundan, Jayakaran

2013-01-01

The present study investigated the impact of textual input enhancement and explicit rule presentation on 93 Iranian EFL learners' intake of simple past tense. Three intact general English classes in Tabriz Azad University were randomly assigned to: 1) a control group; 2) a TIE group; and 3) a TIE plus explicit rule presentation group. All…

Contexts of textual production and the construction of coherence in stories written by children / Contexto de produção e o estabelecimento da coerência na escrita de histórias por crianças

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Ana Paula Perdigão Pessoa

2010-01-01

Full Text Available This study examines the influence of schooling and the context of textual production on stories written by 1st and 2nd graders. In the first condition, children were asked to write original stories. In the second condition, they were asked to reproduce in writing a classical tale for children. The stories were classified according to the complexity and coherence of the narrative. Results indicate that schooling and condition of text production influenced the establishment of textual coherence. However, the effect of the contexts of textual production on children's writing was not the same for all children. Sensitivity to the contexts of text production seemed to have been related to children's awareness of narrative schema.

Coastal habitats as surrogates for taxonomic, functional and trophic structures of benthic faunal communities.

Science.gov (United States)

Törnroos, Anna; Nordström, Marie C; Bonsdorff, Erik

2013-01-01

Due to human impact, there is extensive degradation and loss of marine habitats, which calls for measures that incorporate taxonomic as well as functional and trophic aspects of biodiversity. Since such data is less easily quantifiable in nature, the use of habitats as surrogates or proxies for biodiversity is on the rise in marine conservation and management. However, there is a critical gap in knowledge of whether pre-defined habitat units adequately represent the functional and trophic structure of communities. We also lack comparisons of different measures of community structure in terms of both between- (β) and within-habitat (α) variability when accounting for species densities. Thus, we evaluated a priori defined coastal habitats as surrogates for traditional taxonomic, functional and trophic zoobenthic community structure. We focused on four habitats (bare sand, canopy-forming algae, seagrass above- and belowground), all easily delineated in nature and defined through classification systems. We analyzed uni- and multivariate data on species and trait diversity as well as stable isotope ratios of benthic macrofauna. A good fit between habitat types and taxonomic and functional structure was found, although habitats were more similar functionally. This was attributed to within-habitat heterogeneity so when habitat divisions matched the taxonomic structure, only bare sand was functionally distinct. The pre-defined habitats did not meet the variability of trophic structure, which also proved to differentiate on a smaller spatial scale. The quantification of trophic structure using species density only identified an epi- and an infaunal unit. To summarize the results we present a conceptual model illustrating the match between pre-defined habitat types and the taxonomic, functional and trophic community structure. Our results show the importance of including functional and trophic aspects more comprehensively in marine management and spatial planning.

Land use change has stronger effects on functional diversity than taxonomic diversity in tropical Andean hummingbirds.

Science.gov (United States)

Tinoco, Boris A; Santillán, Vinicio E; Graham, Catherine H

2018-03-01

Land use change modifies the environment at multiple spatial scales, and is a main driver of species declines and deterioration of ecosystem services. However, most of the research on the effects of land use change has focused on taxonomic diversity, while functional diversity, an important predictor of ecosystem services, is often neglected. We explored how local and landscape scale characteristics influence functional and taxonomic diversity of hummingbirds in the Andes Mountains in southern Ecuador. Data was collected in six landscapes along a land use gradient, from an almost intact landscape to one dominated by cattle pastures. We used point counts to sample hummingbirds from 2011 to 2012 to assessed how local factors (i.e., vegetation structure, flowering plants richness, nectar availability) and landscape factors (i.e., landscape heterogeneity, native vegetation cover) influenced taxonomic and functional diversity. Then, we analyzed environment - trait relationships (RLQ test) to explore how different hummingbird functional traits influenced species responses to these factors. Taxonomic and functional diversity of hummingbirds were positively associated with landscape heterogeneity but only functional diversity was positively related to native vegetation coverage. We found a weak response of taxonomic and functional diversity to land use change at the local scale. Environment-trait associations showed that body mass of hummingbirds likely influenced species sensitivity to land use change. In conclusion, landscape heterogeneity created by land use change can positively influence hummingbird taxonomic and functional diversity; however, a reduction of native vegetation cover could decrease functional diversity. Given that functional diversity can mediate ecosystem services, the conservation of native vegetation cover could play a key role in the maintenance of hummingbird pollination services in the tropical Andes. Moreover, there are particular functional

Textual Demands of Passages in Three English/Language Arts Common Core Assessments and One Core Literacy Program for Intermediate Elementary Grades

Science.gov (United States)

Morrison, Timothy G.; Wilcox, Brad; Murdoch, Erica; Bird, Lauren

2018-01-01

The Common Core has emphasized reading for comprehension, including making inferences. However, little is known about the textual demands found within assessment and instructional passages that are promoted as being in line with Common Core expectations. The purpose of this content analysis was to identify the readability levels, passage length,…

A Cross Cultural Analysis of Textual and Interpersonal Metadiscourse Markers: The Case of Economic Articles in English and Persian Newspapers

Science.gov (United States)

Boshrabadi, Abbas Mehrabi; Biria, Reza; Zavari, Zahra

2014-01-01

This study was an attempt to investigate the functional role of textual and interpersonal metadiscourse markers in English and Persian Economic news reports. To this end, 10 news articles, 5 in each language, were randomly selected from the Economic sections of the leading newspapers published in 2013-2014 in Iran and the United States. Based on…

Taxonomic and Thematic Organisation of Proper Name Conceptual Knowledge

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Sebastian J. Crutch

2011-01-01

Full Text Available We report the investigation of the organisation of proper names in two aphasic patients (NBC and FBI. The performance of both patients on spoken word to written word matching tasks was inconsistent, affected by presentation rate and semantic relatedness of the competing responses, all hallmarks of a refractory semantic access dysphasia. In a series of experiments we explored the semantic relatedness effects within their proper name vocabulary, including brand names and person names. First we demonstrated the interaction between very fine grain organisation and personal experience, with one patient with a special interest in the cinema demonstrating higher error rates when identifying the names of actors working in a similar film genre (e.g. action movies: Arnold Schwarzenegger, Bruce Willis, Sylvester Stallone, Mel Gibson than those working in different genres (e.g. Arnold Schwarzenegger, Gregory Peck, Robin Williams, Gene Kelly. Second we compared directly two potential principles of semantic organisation – taxonomic and thematic. Furthermore we considered these principles of organisation in the context of the individuals' personal knowledge base. We selected topics matching the interests and experience of each patient, namely cinema and literature (NBC and naval history (FBI. The stimulus items were arranged in taxonomic arrays (e.g. Jane Austen, Emily Bronte, Agatha Christie, thematic arrays (e.g. Jane Austen, Pride and Prejudice, Mr Darcy, and unrelated arrays (e.g. Jane Austen, Wuthering Heights, Hercule Poirot. We documented that different patterns of taxonomic and thematic organisation were constrained by whether the individual has limited knowledge, moderate knowledge or detailed knowledge of a particular vocabulary. It is suggested that moderate proper name knowledge is primarily organised by taxonomy whereas extensive experience results in a more detailed knowledge base in which theme is a powerful organising principle.

Taxonomic and thematic organisation of proper name conceptual knowledge.

Science.gov (United States)

Crutch, Sebastian J; Warrington, Elizabeth K

2011-01-01

We report the investigation of the organisation of proper names in two aphasic patients (NBC and FBI). The performance of both patients on spoken word to written word matching tasks was inconsistent, affected by presentation rate and semantic relatedness of the competing responses, all hallmarks of a refractory semantic access dysphasia. In a series of experiments we explored the semantic relatedness effects within their proper name vocabulary, including brand names and person names. First we demonstrated the interaction between very fine grain organisation and personal experience, with one patient with a special interest in the cinema demonstrating higher error rates when identifying the names of actors working in a similar film genre (e.g., action movies: Arnold Schwarzenegger, Bruce Willis, Sylvester Stallone, Mel Gibson) than those working in different genres (e.g., Arnold Schwarzenegger, Gregory Peck, Robin Williams, Gene Kelly). Second we compared directly two potential principles of semantic organisation - taxonomic and thematic. Furthermore we considered these principles of organisation in the context of the individuals' personal knowledge base. We selected topics matching the interests and experience of each patient, namely cinema and literature (NBC) and naval history (FBI). The stimulus items were arranged in taxonomic arrays (e.g., Jane Austen, Emily Bronte, Agatha Christie), thematic arrays (e.g., Jane Austen, Pride and Prejudice, Mr Darcy), and unrelated arrays (e.g., Jane Austen, Wuthering Heights, Hercule Poirot). We documented that different patterns of taxonomic and thematic organisation were constrained by whether the individual has limited knowledge, moderate knowledge or detailed knowledge of a particular vocabulary. It is suggested that moderate proper name knowledge is primarily organised by taxonomy whereas extensive experience results in a more detailed knowledge base in which theme is a powerful organising principle.

Hacia una didáctica de la composición textual en la escuela infantil y primaria

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Margarita CASANUEVA HERNÁNDEZ

2009-11-01

Full Text Available RESUMEN: Parece urgente la necesidad de una didáctica del texto para ser aplicada en la enseñanza de la lengua en la Escuela, que tenga en cuenta el actual enfoque comunicativo, en el que se concibe al discurso como el nivel de desarrollo real y no teórico del lenguaje, y en el que, en este sentido, coinciden tres tipos de relaciones: semánticas, gramaticales (incluyendo los niveles de morfema, sintagma y oración y pragmáticas. Es de esperar que el nuevo planteamiento palie, en gran medida, problemas relativos a la comprensión y expresión oral y escrita, tales como la coherencia en la composición textual y la ortografía, que afectan a todos los niveles de enseñanza.ABSTRACT: There is a need for text instructions that keep in mind the actual communicative focus to be applied in the teaching of language in Elementary Schools in which the discourse is conceived as a level of real development and not a theoretical one thereby linking three relationships: semantic, grammatical (including levels of morphemes, syntagm and sentence and pragmatic. It is hoped that this new suggestion will greatly mitigate, those problems related to oral and written comprehension and expression such as coherence in a textual context and spelling, which affect all levels of teaching.

Taxonomic novelties within the genus Columnea (Gesneriaceae)

International Nuclear Information System (INIS)

Amaya Marquez, Marisol

2010-01-01

A new species of Columnea and a new variety of Columnea lanata (Seem.) Kuntze belonging to section Collandra (Gesneriaceae) are described and illustrated. The new species was found in the Pacific slopes of the Cordillera Occidental in the Department of Choco in Colombia; the new variety comes from the Pacific slopes of the Cordillera Occidental, in the region of Murri located at the North West of the Department of Antioquia . A taxonomic key to distinguish the new species from the morphologically closer species is presented.

Exploratory analysis of textual data from the Mother and Child Handbook using a text mining method (II): Monthly changes in the words recorded by mothers.

Science.gov (United States)

Tagawa, Miki; Matsuda, Yoshio; Manaka, Tomoko; Kobayashi, Makiko; Ohwada, Michitaka; Matsubara, Shigeki

2017-01-01

The aim of the study was to examine the possibility of converting subjective textual data written in the free column space of the Mother and Child Handbook (MCH) into objective information using text mining and to compare any monthly changes in the words written by the mothers. Pregnant women without complications (n = 60) were divided into two groups according to State-Trait Anxiety Inventory grade: low trait anxiety (group I, n = 39) and high trait anxiety (group II, n = 21). Exploratory analysis of the textual data from the MCH was conducted by text mining using the Word Miner software program. Using 1203 structural elements extracted after processing, a comparison of monthly changes in the words used in the mothers' comments was made between the two groups. The data was mainly analyzed by a correspondence analysis. The structural elements in groups I and II were divided into seven and six clusters, respectively, by cluster analysis. Correspondence analysis revealed clear monthly changes in the words used in the mothers' comments as the pregnancy progressed in group I, whereas the association was not clear in group II. The text mining method was useful for exploratory analysis of the textual data obtained from pregnant women, and the monthly change in the words used in the mothers' comments as pregnancy progressed differed according to their degree of unease. © 2016 Japan Society of Obstetrics and Gynecology.

Multimedia and Textual Reading Comprehension: Multimedia as Personal Learning Environment’s Enriching Format

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Jose Daniel García Martínez

2017-01-01

Full Text Available In this article we will discuss part of a piece of research that was conducted with two 4ESO groups. Textual learning is opposed to multimedia learning within the context of PLE’s (Personal Learning Environment reading tools and strategies. In the research an analysis was made of whether it would be possible to improve the reading process through multimedia over a school term in two different aspects; one evolutionary with six classroom exercises and one evaluation with a final exercise. Concretely, this article states the number of question mistakes that the students made. The data indicates that there is a better evolution in students that performed the multimedia dynamic, although there are not any relevant differences in the final evaluation.

Combining Taxonomic and Functional Approaches to Unravel the Spatial Distribution of an Amazonian Butterfly Community.

Science.gov (United States)

Graça, Márlon B; Morais, José W; Franklin, Elizabeth; Pequeno, Pedro A C L; Souza, Jorge L P; Bueno, Anderson Saldanha

2016-04-01

This study investigated the spatial distribution of an Amazonian fruit-feeding butterfly assemblage by linking species taxonomic and functional approaches. We hypothesized that: 1) vegetation richness (i.e., resources) and abundance of insectivorous birds (i.e., predators) should drive changes in butterfly taxonomic composition, 2) larval diet breadth should decrease with increase of plant species richness, 3) small-sized adults should be favored by higher abundance of birds, and 4) communities with eyespot markings should be able to exploit areas with higher predation pressure. Fruit-feeding butterflies were sampled with bait traps and insect nets across 25 km(2) of an Amazonian ombrophilous forest in Brazil. We measured larval diet breadth, adult body size, and wing marking of all butterflies. Our results showed that plant species richness explained most of the variation in butterfly taxonomic turnover. Also, community average diet breadth decreased with increase of plant species richness, which supports our expectations. In contrast, community average body size increased with the abundance of birds, refuting our hypothesis. We detected no influence of environmental gradients on the occurrence of species with eyespot markings. The association between butterfly taxonomic and functional composition points to a mediator role of the functional traits in the environmental filtering of butterflies. The incorporation of the functional approach into the analyses allowed for the detection of relationships that were not observed using a strictly taxonomic perspective and provided an extra insight into comprehending the potential adaptive strategies of butterflies. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Does taxonomic diversity in indicator groups influence their effectiveness in identifying priority areas for species conservation?

DEFF Research Database (Denmark)

Bladt, Jesper Stentoft; Larsen, Frank Wugt; Rahbek, Carsten

2008-01-01

The identification of priority areas for biodiversity conservation is a cornerstone of systematic conservation planning. However, biodiversity, or even the distribution of all species, cannot be directly quantified, due to the inherent complexity of natural systems. Species indicator groups may...... serve as important tools for the identification of priority areas for conservation. Yet, it is unclear which factors make certain indicator groups perform better than others. In this study, using data on the Danish distribution of 847 species of plants, vertebrates and insects, we assessed whether...... the taxonomic diversity in species indicator groups influence their effectiveness in the identification of priority areas for species conservation. We tested whether indicator groups comprising a higher taxonomic diversity (i.e. indicator groups consisting of species from many different taxonomic groups...

Gramática y producción textual: bases lingüísticas para la intervención didáctica | Grammar and Textual production: Linguistic Bases for Educational Intervention

Directory of Open Access Journals (Sweden)

Francisco Javier Perea Siller

2015-05-01

Full Text Available Resumen El aprendizaje de la gramática en la enseñanza secundaria continúa utilizando una metodología deductiva, a la vez que se presenta desconectada de los otros componentes de la enseñanza-aprendizaje de la asignatura Lengua castellana y literatura. Para escapar de los planteamientos deductivos, en primer lugar adoptamos un punto de vista discursivo; en segundo lugar, proponemos partir del conocimiento de la producción escrita de los estudiantes, caracterizada por la pobreza de recursos y la presencia de errores. La Lingüística de Corpus permite conocer el primer aspecto, por ejemplo, nexos para conectar partes del texto. Por su parte, el Análisis de Errores revela las incorrecciones que en mayor medida cometen los estudiantes, tales como problemas de correferencia en textos narrativos o solecismos y errores pragmáticos en textos argumentativos. Estas dificultades, situadas en contextos textuales concretos, deben proponerse como los principales objetos de aprendizaje de la gramática a la vez que deben incidir en la forma en la que el profesor afronta la gramática. Abstract Secondary schools still use a deductive approach in learning grammar. Besides, grammar learning continues to be disconnected from the other components of the teaching and learning of the subject Lengua Castellana y Literatura. To avoid the deductive approach, firstly we adopt a discursive point of view; secondly, we propose to start with the knowledge of our students’ written productions, which are characterized mainly by poverty of resources and the presence of errors. Corpus Linguistics allows us to know the first aspect, for example, links to connect parts of the text. Meanwhile, Error Analysis reveals the inaccuracies that the students produce, such as coreference problems in narrative texts or solecisms and pragmatic errors in argumentative texts. Such difficulties, situated in specific textual contexts, should be proposed as the main objects of grammar

The nutty world of hazel names - a crtitical taxonomic checklist of the genus Corylus (Betulaceae)

OpenAIRE

Holstein, Norbert; Tamer, Sarah el; Weigend, Maximilian

2018-01-01

Hazelnuts (Corylus L.) are the source of one of the globally most important nut crops. Despite their economic and cultural importance, taxonomic knowledge is poor, even the number of species is equivocal. Weak morphological differentiation, the inconsistent taxonomic treatment of horticultural selections and cultivars, and uncritical regional treatments generated a multitude of names. The situation is further complicated by an ancient history of use (at least 10 400 years), trade (at least 40...

Comparing the Ability of Conventional and Digital Soil Maps to Explain Soil Variability using Diversity Indices

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zohreh mosleh

2017-06-01

Full Text Available Introduction: Effective and sustainable soil management requires knowledge about the spatial patterns of soil variation and soil surveys are important and useful sources of data that can be used. Prior knowledge about the spatial distribution of the soils is the first essential step for this aim but this requires the collection of large amounts of soil information. However, the conventional soil surveys are usually not useful for providing quantitative information about the spatial distribution of soil properties that are used in many environmental studies. Recently, by the rapid development of the computers and technology together with the availability of new types of remote sensing data and digital elevation models (DEMs, digital and quantitative approaches have been developed. These new techniques relies on finding the relationships between soil properties or classes and the auxiliary information that explain the soil forming factors or processes and finally predict soil patterns on the landscape. Different types of the machine learning approaches have been applied for digital soil mapping of soil classes, such as the logistic and multinomial logistic regressions, neural networks and classification trees. In reality, soils are physical outcomes of the interactions happening among the geology, climate, hydrology and geomorphic processes. Diversity is a way of measuring soil variation. Ibanez (9 first introduced ecological diversity indices as measures of diversity. Application of the diversity indices in soil science have considerably increased in recent years. Taxonomic diversity has been evaluated in the most previous researches whereas comparing the ability of different soil mapping approaches based on these indices was rarely considered. Therefore, the main objective of this study was to compare the ability of the conventional and digital soil maps to explain the soil variability using diversity indices in the Shahrekord plain of

Taxonomic Studies on the Genus Arnebia Forssk. (Boraginaceae in India

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Kumar Ambrish

2014-12-01

Full Text Available The genus Arnebia Forssk. in India is taxonomically studied based on field surveys, collection of live plants, consultation of herbarium and literature. The genus is represented in India by 10 taxa including 8 species and 2 varieties viz., Arnebia bhattacharyyae K. Ambrish & S.K. Srivast., A. benthamii (Wall. ex G. Don I.M. Johnst., A. euchroma ( Royle I.M. Johnst., A. guttata Bunge, A. hispidissima (Sieber ex Lehm. A.DC., A. linearifolia A.DC., A. griffithii Boiss., A. nandadeviensis K. Chandra Sek. & R.S. Rawal , A. euchroma var. grandis (Bornm. Kazmi and A. guttata var. thomsonii (C.B. Clarke Kazmi, distributed in Jammu & Kashmir, Himachal Pradesh and Uttarakhand in North-West Himalaya to Uttar Pradesh, Punjab and Rajasthan in India. Dichotomous keys to all the species in India along with taxonomic description, distribution, illustrations and images of most of the species including type and their economic importance are provided.

Photometric survey and taxonomic identifications of 92 near-Earth asteroids

Science.gov (United States)

Lin, Chien-Hsien; Ip, Wing-Huen; Lin, Zhong-Yi; Cheng, Yu-Chi; Lin, Hsing-Wen; Chang, Chan-Kao

2018-03-01

A photometric survey of near-Earth asteroids (NEAs) was conducted from 2012 through 2014 at Lulin Observatory, Taiwan. The measurements of the color indices, B-V, V-R, and V-I allow the classification of 92 NEAs into seven taxonomic types. Of these samples, 39 of them are new classifications. The fractional abundances of these taxonomic complexes are: A ∼3%, C∼6.5%, D∼8%, Q∼26%, S∼37%, V∼6.5%, and X∼13%. This result is similar to that of Thomas et al. (2011) even though the populations of the D- and X-complex with low albedos are under-represented. The ratio of the C-cluster to the total population of S + C clusters are 0.22 ± 0.06 for H ≤ 17.0 and 0.31 ± 0.06 for H > 17.0, indicating a slightly higher fraction of dark-object population with sizes smaller than 1 km.

Comprensión y producción textual narrativa en preescolares

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Luz Stella López Silva

2014-01-01

Full Text Available Este estudio buscó identificar y describir las habilidades de comprensión y producción textual narrativa de 158 estudiantes de transición de estrato 1 y 2 de colegios públicos de la ciudad de Barranquilla (Colombia. Para evaluar esta capacidad se les pidió a los niños que narraran un texto que se les había leído anteriormente. Las muestras de lenguaje se analizaron utilizando el software SALT y posteriormente se utilizó el software SPSS para realizar los análisis descriptivos. Se consideró la estructura organizativa microestructura, macroestructura y superestructura desde el nivel de comprensión literal e inferencial. Se encontró que la mayoría de los niños tienen un desarrollo narrativo acorde con su edad, sin embargo, la elaboración inferencial fue escasa, lo que posiblemente afectó la comprensión de la historia por parte de los mismos.

Standardizing metadata and taxonomic identification in metabarcoding studies.

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Tedersoo, Leho; Ramirez, Kelly S; Nilsson, R Henrik; Kaljuvee, Aivi; Kõljalg, Urmas; Abarenkov, Kessy

2015-01-01

High-throughput sequencing-based metabarcoding studies produce vast amounts of ecological data, but a lack of consensus on standardization of metadata and how to refer to the species recovered severely hampers reanalysis and comparisons among studies. Here we propose an automated workflow covering data submission, compression, storage and public access to allow easy data retrieval and inter-study communication. Such standardized and readily accessible datasets facilitate data management, taxonomic comparisons and compilation of global metastudies.

Comparative analysis of taxonomic, functional, and metabolic patterns of microbiomes from 14 full-scale biogas reactors by metagenomic sequencing and radioisotopic analysis.

Science.gov (United States)

Luo, Gang; Fotidis, Ioannis A; Angelidaki, Irini

2016-01-01

Biogas production is a very complex process due to the high complexity in diversity and interactions of the microorganisms mediating it, and only limited and diffuse knowledge exists about the variation of taxonomic and functional patterns of microbiomes across different biogas reactors, and their relationships with the metabolic patterns. The present study used metagenomic sequencing and radioisotopic analysis to assess the taxonomic, functional, and metabolic patterns of microbiomes from 14 full-scale biogas reactors operated under various conditions treating either sludge or manure. The results from metagenomic analysis showed that the dominant methanogenic pathway revealed by radioisotopic analysis was not always correlated with the taxonomic and functional compositions. It was found by radioisotopic experiments that the aceticlastic methanogenic pathway was dominant, while metagenomics analysis showed higher relative abundance of hydrogenotrophic methanogens. Principal coordinates analysis showed the sludge-based samples were clearly distinct from the manure-based samples for both taxonomic and functional patterns, and canonical correspondence analysis showed that the both temperature and free ammonia were crucial environmental variables shaping the taxonomic and functional patterns. The study further the overall patterns of functional genes were strongly correlated with overall patterns of taxonomic composition across different biogas reactors. The discrepancy between the metabolic patterns determined by metagenomic analysis and metabolic pathways determined by radioisotopic analysis was found. Besides, a clear correlation between taxonomic and functional patterns was demonstrated for biogas reactors, and also the environmental factors that shaping both taxonomic and functional genes patterns were identified.

Species delimitation in taxonomically difficult fungi: the case of Hymenogaster.

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Benjamin Stielow

2011-01-01

Full Text Available False truffles are ecologically important as mycorrhizal partners of trees and evolutionarily highly interesting as the result of a shift from epigeous mushroom-like to underground fruiting bodies. Since its first description by Vittadini in 1831, inappropriate species concepts in the highly diverse false truffle genus Hymenogaster has led to continued confusion, caused by a large variety of prevailing taxonomical opinions.In this study, we reconsidered the species delimitations in Hymenogaster based on a comprehensive collection of Central European taxa comprising more than 140 fruiting bodies from 20 years of field work. The ITS rDNA sequence dataset was subjected to phylogenetic analysis as well as clustering optimization using OPTSIL software.Among distinct species concepts from the literature used to create reference partitions for clustering optimization, the broadest concept resulted in the highest agreement with the ITS data. Our results indicate a highly variable morphology of H. citrinus and H. griseus, most likely linked to environmental influences on the phenology (maturity, habitat, soil type and growing season. In particular, taxa described in the 19(th century frequently appear as conspecific. Conversely, H. niveus appears as species complex comprising seven cryptic species with almost identical macro- and micromorphology. H. intermedius and H. huthii are described as novel species, each of which with a distinct morphology intermediate between two species complexes. A revised taxonomy for one of the most taxonomically difficult genera of Basidiomycetes is proposed, including an updated identification key. The (semi-automated selection among species concepts used here is of importance for the revision of taxonomically problematic organism groups in general.

Determination of taxonomic status of chinese species of the genus clematis by using high performance liquid chromatography-mass spectrometry (HPLC-MS) technique

International Nuclear Information System (INIS)

Ishtiaq, M.; Ahmed, H.

2010-01-01

A comparative taxonomic study using chemometric and numerical taxonomic approaches on 15 populations of 12 species of major taxa of the genus Clematis, belonging to sections, Rectae, Clematis, Meclatis, Tubulosae and Viorna were analyzed by HPLC coupled with diode array detector and ESI-MS. The chemo diversity profile of saponins proved to be useful taxonomic markers for the genus and results are presented in pheno grams. The compound 'Huzhangoside D' was the most abundant in analyzed species of the genus. Numerical taxonomic study was also conducted based on phylogenetically informative characters which corroborated with chemical fingerprinting findings. The significance of chemical markers in taxonomic study as well as their correlation between morphology and chemical compound profile is also debated with its significant role in botanic drugs identification. (author)

Global Taxonomic Diversity of Living Reptiles

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Pincheira-Donoso, Daniel; Bauer, Aaron M.; Meiri, Shai; Uetz, Peter

2013-01-01

Reptiles are one of the most ecologically and evolutionarily remarkable groups of living organisms, having successfully colonized most of the planet, including the oceans and some of the harshest and more environmentally unstable ecosystems on earth. Here, based on a complete dataset of all the world’s diversity of living reptiles, we analyse lineage taxonomic richness both within and among clades, at different levels of the phylogenetic hierarchy. We also analyse the historical tendencies in the descriptions of new reptile species from Linnaeus to March 2012. Although (non-avian) reptiles are the second most species-rich group of amniotes after birds, most of their diversity (96.3%) is concentrated in squamates (59% lizards, 35% snakes, and 2% amphisbaenians). In strong contrast, turtles (3.4%), crocodilians (0.3%), and tuataras (0.01%) are far less diverse. In terms of species discoveries, most turtles and crocodilians were described early, while descriptions of lizards, snakes and amphisbaenians are multimodal with respect to time. Lizard descriptions, in particular, have reached unprecedented levels during the last decade. Finally, despite such remarkably asymmetric distributions of reptile taxonomic diversity among groups, we found that the distributions of lineage richness are consistently right-skewed, with most clades (monophyletic families and genera) containing few lineages (monophyletic genera and species, respectively), while only a few have radiated greatly (notably the families Colubridae and Scincidae, and the lizard genera Anolis and Liolaemus). Therefore, such consistency in the frequency distribution of richness among clades and among phylogenetic levels suggests that the nature of reptile biodiversity is fundamentally fractal (i.e., it is scale invariant). We then compared current reptile diversity with the global reptile diversity and taxonomy known in 1980. Despite substantial differences in the taxonomies (relative to 2012), the patterns of

Global taxonomic diversity of living reptiles.

Science.gov (United States)

Pincheira-Donoso, Daniel; Bauer, Aaron M; Meiri, Shai; Uetz, Peter

2013-01-01

Reptiles are one of the most ecologically and evolutionarily remarkable groups of living organisms, having successfully colonized most of the planet, including the oceans and some of the harshest and more environmentally unstable ecosystems on earth. Here, based on a complete dataset of all the world's diversity of living reptiles, we analyse lineage taxonomic richness both within and among clades, at different levels of the phylogenetic hierarchy. We also analyse the historical tendencies in the descriptions of new reptile species from Linnaeus to March 2012. Although (non-avian) reptiles are the second most species-rich group of amniotes after birds, most of their diversity (96.3%) is concentrated in squamates (59% lizards, 35% snakes, and 2% amphisbaenians). In strong contrast, turtles (3.4%), crocodilians (0.3%), and tuataras (0.01%) are far less diverse. In terms of species discoveries, most turtles and crocodilians were described early, while descriptions of lizards, snakes and amphisbaenians are multimodal with respect to time. Lizard descriptions, in particular, have reached unprecedented levels during the last decade. Finally, despite such remarkably asymmetric distributions of reptile taxonomic diversity among groups, we found that the distributions of lineage richness are consistently right-skewed, with most clades (monophyletic families and genera) containing few lineages (monophyletic genera and species, respectively), while only a few have radiated greatly (notably the families Colubridae and Scincidae, and the lizard genera Anolis and Liolaemus). Therefore, such consistency in the frequency distribution of richness among clades and among phylogenetic levels suggests that the nature of reptile biodiversity is fundamentally fractal (i.e., it is scale invariant). We then compared current reptile diversity with the global reptile diversity and taxonomy known in 1980. Despite substantial differences in the taxonomies (relative to 2012), the patterns of

Global taxonomic diversity of living reptiles.

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Daniel Pincheira-Donoso

Full Text Available Reptiles are one of the most ecologically and evolutionarily remarkable groups of living organisms, having successfully colonized most of the planet, including the oceans and some of the harshest and more environmentally unstable ecosystems on earth. Here, based on a complete dataset of all the world's diversity of living reptiles, we analyse lineage taxonomic richness both within and among clades, at different levels of the phylogenetic hierarchy. We also analyse the historical tendencies in the descriptions of new reptile species from Linnaeus to March 2012. Although (non-avian reptiles are the second most species-rich group of amniotes after birds, most of their diversity (96.3% is concentrated in squamates (59% lizards, 35% snakes, and 2% amphisbaenians. In strong contrast, turtles (3.4%, crocodilians (0.3%, and tuataras (0.01% are far less diverse. In terms of species discoveries, most turtles and crocodilians were described early, while descriptions of lizards, snakes and amphisbaenians are multimodal with respect to time. Lizard descriptions, in particular, have reached unprecedented levels during the last decade. Finally, despite such remarkably asymmetric distributions of reptile taxonomic diversity among groups, we found that the distributions of lineage richness are consistently right-skewed, with most clades (monophyletic families and genera containing few lineages (monophyletic genera and species, respectively, while only a few have radiated greatly (notably the families Colubridae and Scincidae, and the lizard genera Anolis and Liolaemus. Therefore, such consistency in the frequency distribution of richness among clades and among phylogenetic levels suggests that the nature of reptile biodiversity is fundamentally fractal (i.e., it is scale invariant. We then compared current reptile diversity with the global reptile diversity and taxonomy known in 1980. Despite substantial differences in the taxonomies (relative to 2012, the

Método para la construcción de una taxonomía: estructura base para riesgos en outsourcing de software

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Gloria Piedad Gasca Hurtado

2011-01-01

Full Text Available Este artículo propone una taxonomía de riesgos enfocada en el ámbito de outsourcing de software. El objetivo es definir una estructura de clasificación de riesgos, relacionada con el proceso de outsourcing de software. La motivación está dada por la importancia que tiene la identificación de riesgos, y la ayuda que prestan las taxonomías al respecto, por lo cual se les conoce como una técnica efectiva que permite desarrollar una mejor gestión de riesgos. Este artículo incluye el método para construir la taxonomía (llamado MECT y la estructura de una taxonomía de riesgos para outsourcing de software.

Intercultural Passages in Ottó Tolnai’s Textual Universe

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Ispánovics Csapó Julianna

2014-12-01

Full Text Available The literary palette of Tolnai’s textual universe within the Hungarian literature from Vojvodina is based, among others, upon the intertwining of various cultural entities. The social and cultural spaces of “Big Yugoslavia,” the phenomena, figures, and works of the European-oriented Yugoslav and ethnic culture (literature, painting, book publishing, theatre, sports, etc., the mentalities of the migrant worker’s life, the legends of the Tito cult embed the narrative procedures of particular texts by Tolnai into a rich culture-historical context. Similarly to the model of Valery’s Mediterranean, the narrator’s Janus-faced Yugoslavia simultaneously generates concrete and utopian spaces, folding upon one another. Above the micro spaces (towns, houses, flats evolving along the traces of reality, there float the Proustian concepts of scent and colour of the Adriatic sea (salt, azure, mimosa, lavender, laurel. The nostalgia towards the lost Eden rises high and waves about the “grand form” of Big Yugoslavia, the related space of which is the Monarchy. The counterpoints of the grand forms are “the small, void forms,” provinces, regions (Vojvodina, North Bačka and the micro spaces coded into them. The text analyses of the paper examine the intercultural motions and identityforming culture-historical elements of the outlined space system.

Uma análise da coesão textual e da estrutura narrativa em textos escritos por adolescentes surdos Textual cohesion and narrative structure in written texts produced by deaf adolescents

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Viviany Meirelles

2004-04-01

Full Text Available Considerando que os surdos utilizam diferentes formas de comunicação, investigou-se se tal fator influenciaria a produção escrita de textos. Quarenta adolescentes surdos com perda auditiva profunda, alunos de 5ª à 7ª série do ensino fundamental foram igualmente divididos em dois grupos: usuários da LIBRAS e surdos oralizados. A partir de uma seqüência de gravuras, cada participante produziu uma história escrita que foi analisada quanto à qualidade da estrutura narrativa e quanto ao estabelecimento de cadeias coesivas. Os resultados mostraram que a coesão textual é um problema para os surdos, não havendo diferenças entre os grupos. Embora as produções apresentassem limitações quanto à estrutura narrativa, verificou-se que um maior número de surdos oralizados produzia histórias mais elaboradas do que os usuários da LIBRAS. As diferenças entre grupos e dificuldades encontradas são interpretadas a partir do pouco contato que os surdos têm com textos em seu cotidiano. Implicações educacionais são discutidas.Deaf individuals use different forms of communication: oral language and sign language. This study investigated whether these forms of communication would have an effect on text production. Forty deaf adolescents were equally divided into two groups: those who used sign language (LIBRAS and those who used Portuguese in its oral form. Each participant was asked to write a story from a sequence of pictures. The stories were analyzed according to their cohesiveness and to their narrative structure. It was found that both groups had difficulties in establishing textual cohesion in their stories. Although both groups produced stories with an elementary structure, deaf adolescents who used oral language produced stories more elaborated than those who used sign language. Differences between groups and the difficulties the participants had are interpreted as a function of their limited contact with written texts in their

THE EUROPEAN CONVENTION ON HUMAN RIGHTS AND THE RIGHTS RELATED TO ARTICLE 6 UNDER THE ECHR JURISPRUDENCE: INDIPENDENT AND IMPARTIAL TRIBUNAL ESTABLISHED BY LAW

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Elena ANDREEVSKA

2014-05-01

Full Text Available Access to justice is a core fundamental right and a central concept in the broader field of justice. The case-law of the European Court of Human Rights on Article 6 is a complex body of rules. Article 6 of the Convention was inspired by Article 10 and 11(1 of the Universal Declaration of Human rights of 1948. It has also its counterpart – with minor differences in Article 14 of the International Covenant on Civil and Political Rights on 1966. Article 6, which guarantees the right to fair trial, occupies a central place in the system of the Convention. it is a generally agreed that this provision is the most frequently cited one of the Convention, both at the national and international levels. This Article contains a variety of rights which are all related to the good administration of justice, not only criminal, but also in the civil and administrative matters. The ‘independent and impartial tribunal established by law’ is one of textual elements of the Fair Trial Right, as long as it has direct and explicit expression in the text of Convention. Even in simple logical way it can be considered as a suite of requirements referring to 1 the notion of tribunal 2 its attribute of being established by law 3 being independent and 4 being impartial.

A review of the taxonomic status and biology of the Cape Parrot ...

African Journals Online (AJOL)

A review of the taxonomic status and biology of the Cape Parrot Poicephalus robustus , with reference to the Brown-necked Parrot P. fuscicollis fuscicollis and the Grey-headed Parrot P. f. suahelicus.

Computers in the Teaching of English as a Foreign Language: Access to the Diversity of Textual Genres and Language Skills

Science.gov (United States)

Dos Santos, Roberto-Márcio; Sobrinho, Jerônimo Coura

In the area of language teaching both language skills and textual genres can be worked with simultaneously (thus responding to the Brazilian Curricular Parameters and to the trends in contemporary education, which emphasize contextualized teaching) by means of computers. Computers can make the teaching process dynamic and rich, since they enable the access to the foreign language through virtual environments, which creates a larger number of learning contexts, with all their specific vocabulary and linguistic features in real communication. This study focuses on possible applications of this kind of approach. The computer online is a resource of diverse textual genres and can be an important tool in the language classroom as well as an access to authentic material produced in contextualized practice close to real-life communication. On the other hand, all these materials must be appropriately used without ever worshipping the technology as if it were a miraculous solution. After all, the professional pedagogic skills of the teacher should never be forgotten or taken for granted. In this study, a series of interviews with teachers was carried out - both with Brazilian teachers of the public sector (basic education) and language institutes (private English courses) as well as teacher trainers (university professors), in order to verify if the teachers were prepared to work with informatics in teaching practices, and check the professionals’ views on the subject. The ideas of Maingueneau and Marcuschi about textual genres are a theoretical base in this work, besides the concept of cognitive economy. The text and its typology are focused here as the basic material for teaching English, through digital technologies and hypermedia. The study is also based on Sharma and Barrett’s notion of blended learning as a balanced combination of technological resources and traditional practices in the classroom. Thus, this is an attempt to investigate the relevance of

Description of a taxonomically undefined Sclerotiniaceae strain from withered rotten-grapes.

Science.gov (United States)

Lorenzini, Marilinda; Zapparoli, Giacomo

2016-02-01

A necrotrophic member of the Sclerotiniaceae family (herewith named strain C10) isolated from withered rotten-grapes, is described. Interestingly, the fungus has no defined taxonomic position since it has been impossible to attribute it to an existing genus. Phylogenetic analysis of partial sequences of glyceraldehyde 3-phosphate dehydrogenase (G3PDH), heat shock protein 60 (HSP60) and DNA-directed RNA polymerase II subunit (RPB2), revealed that strain C10 is distantly related to Amphobotrys and Botrytis. This evidence clearly distinguishes this new Sclerotiniaceae member from other taxa of the family. Moreover, its morphological characteristics did not match those of Amphobotrys and Botrytis. Infectivity assays demonstrated that strain C10 could be a potential postharvest pathogen of withered grapes. This study revealed the taxonomic importance of this strain suggesting the existence of a possible new genus, a theory that requires further investigation.

Experiential thinking in creationism--a textual analysis.

Science.gov (United States)

Nieminen, Petteri; Ryökäs, Esko; Mustonen, Anne-Mari

2015-01-01

Creationism is a religiously motivated worldview in denial of biological evolution that has been very resistant to change. We performed a textual analysis by examining creationist and pro-evolutionary texts for aspects of "experiential thinking", a cognitive process different from scientific thought. We observed characteristics of experiential thinking as follows: testimonials (present in 100% of sampled creationist texts), such as quotations, were a major form of proof. Confirmation bias (100% of sampled texts) was represented by ignoring or dismissing information that would contradict the creationist hypothesis. Scientifically irrelevant or flawed information was re-interpreted as relevant for the falsification of evolution (75-90% of sampled texts). Evolutionary theory was associated to moral issues by demonizing scientists and linking evolutionary theory to atrocities (63-93% of sampled texts). Pro-evolutionary rebuttals of creationist claims also contained testimonials (93% of sampled texts) and referred to moral implications (80% of sampled texts) but displayed lower prevalences of stereotypical thinking (47% of sampled texts), confirmation bias (27% of sampled texts) and pseudodiagnostics (7% of sampled texts). The aspects of experiential thinking could also be interpreted as argumentative fallacies. Testimonials lead, for instance, to ad hominem and appeals to authorities. Confirmation bias and simplification of data give rise to hasty generalizations and false dilemmas. Moral issues lead to guilt by association and appeals to consequences. Experiential thinking and fallacies can contribute to false beliefs and the persistence of the claims. We propose that science educators would benefit from the systematic analysis of experiential thinking patterns and fallacies in creationist texts and pro-evolutionary rebuttals in order to concentrate on scientific misconceptions instead of the scientifically irrelevant aspects of the creationist-evolutionist debate.

The Army and the Academy as Textual Communities: Exploring Mismatches in the Concepts of Attribution, Appropriation, and Shared Goals

Science.gov (United States)

2010-01-01

writing manual, Student Text 22-1, provides information on plagiarism violations, which are "subject to review and may be referred to an academic board...charges of plagiarism were leveled by an academic who recognized in the manual various ideas and text from previous published sources. In many ways...worried about academic plagiarism may believe that revealing variations in textual practices "sends a message" to students that rules can be bent in

Comparative SEM and LM foliar epidermal and palyno-morphological studies of Amaranthaceae and its taxonomic implications.

Science.gov (United States)

Hussain, Amara Noor; Zafar, Muhammad; Ahmad, Mushtaq; Khan, Raees; Yaseen, Ghulam; Khan, Muhammad Saleem; Nazir, Abdul; Khan, Amir Muhammad; Shaheen, Shabnum

2018-05-01

Palynological features as well as comparative foliar epidermal using light and scanning electron microscope (SEM) of 17 species (10genera) of Amaranthaceae have been studied for its taxonomic significance. Different foliar and palynological micro-morphological characters were examined to explain their value in resolving the difficulty in identification. All species were amphistomatic but stomata on abaxial surface were more abundant. Taxonomically significant epidermal character including stomata type, trichomes (unicellular, multicellular, and capitate) and epidermal cells shapes (polygonal and irregular) were also observed. Pollens of this family are Polypantoporate, pores large, spheroidal, mesoporous region is sparsely to scabrate, densely psilate, and spinulose. All these characters can be active at species level for identification purpose. This study indicates that at different taxonomic levels, LM and SEM pollen and epidermal morphology is explanatory and significant to identify species and genera. © 2018 Wiley Periodicals, Inc.

Research Review: Evaluating and reformulating the developmental taxonomic theory of antisocial behaviour

Science.gov (United States)

Fairchild, Graeme; Goozen, Stephanie HM; Calder, Andrew J; Goodyer, Ian M

2013-01-01

BackgroundThe developmental taxonomic theory proposes that there are two subtypes of antisocial behaviour. The first is a neurodevelopmental disorder which emerges in early childhood and follows a life-course persistent course, whereas the second emerges in adolescence, remits in early adulthood and reflects peer processes such as mimicry of antisocial peers. The aim of this review was to evaluate the developmental taxonomic theory in the light of recent empirical research. MethodsWe conducted a comprehensive literature review comparing these subtypes of antisocial behaviour based on searches on PubMed and other scientific databases covering the period from 1993 to 2013. We focused on research encompassing psychiatric epidemiology, personality assessment, neuropsychology, neuroendocrinology, genetics, and structural and functional neuroimaging. Sixty one empirical studies were identified that investigated one of these forms of antisocial behaviour separately or explicitly compared childhood-onset and adolescence-onset forms of antisocial behaviour. ResultsEmpirical research provides support for the hypothesis that life-course persistent antisocial behaviour is a neurodevelopmental disorder which emerges in the transactions between individual vulnerabilities and environmental adversity. In contrast to the developmental taxonomic theory, however, empirical findings suggest that severe antisocial behaviour that emerges in adolescence frequently has a negative prognosis and is rarely limited to the adolescent period. In addition, both forms of antisocial behaviour are associated with emotion processing deficits, changes in brain structure and function, alterations in cortisol secretion, and atypical personality traits (such as increased callous-unemotional traits). ConclusionsWe conclude that the developmental taxonomic theory is in need of revision, as differences between life-course persistent and adolescence-onset forms of antisocial behaviour appear to be

Taxonomic and ad hoc categorization within the two cerebral hemispheres.

Science.gov (United States)

Shen, Yeshayahu; Aharoni, Bat-El; Mashal, Nira

2015-01-01

A typicality effect refers to categorization which is performed more quickly or more accurately for typical than for atypical members of a given category. Previous studies reported a typicality effect for category members presented in the left visual field/right hemisphere (RH), suggesting that the RH applies a similarity-based categorization strategy. However, findings regarding the typicality effect within the left hemisphere (LH) are less conclusive. The current study tested the pattern of typicality effects within each hemisphere for both taxonomic and ad hoc categories, using words presented to the left or right visual fields. Experiment 1 tested typical and atypical members of taxonomic categories as well as non-members, and Experiment 2 tested typical and atypical members of ad hoc categories as well as non-members. The results revealed a typicality effect in both hemispheres and in both types of categories. Furthermore, the RH categorized atypical stimuli more accurately than did the LH. Our findings suggest that both hemispheres rely on a similarity-based categorization strategy, but the coarse semantic coding of the RH seems to facilitate the categorization of atypical members.

Biotechnological application and taxonomical distribution of plant growth promoting actinobacteria.

Science.gov (United States)

Hamedi, Javad; Mohammadipanah, Fatemeh

2015-02-01

Plant growth promoting (PGP) bacteria are involved in various interactions known to affect plant fitness and soil quality, thereby increasing the productivity of agriculture and stability of soil. Although the potential of actinobacteria in antibiotic production is well-investigated, their capacity to enhance plant growth is not fully surveyed. Due to the following justifications, PGP actinobacteria (PGPA) can be considered as a more promising taxonomical group of PGP bacteria: (1) high numbers of actinobacteria per gram of soil and their filamentous nature, (2) genome dedicated to the secondary metabolite production (~5 to 10 %) is distinctively more than that of other bacteria and (3) number of plant growth promoter genera reported from actinobacteria is 1.3 times higher than that of other bacteria. Mechanisms by which PGPA contribute to the plant growth by association are: (a) enhancing nutrients availability, (b) regulation of plant metabolism, (c) decreasing environmental stress, (d) control of phytopathogens and (e) improvement of soil texture. Taxonomical and chemical diversity of PGPA and their biotechnological application along with their associated challenges are summarized in this paper.

Different Influences on Lexical Priming for Integrative, Thematic, and Taxonomic Relations

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Lara L. Jones

2012-07-01

Full Text Available Word pairs may be integrative (i.e., combination of two concepts into one meaningful entity; e.g., fruit - cake, thematically related (i.e., connected in time and place; e.g., party - cake, and/or taxonomically related (i.e., shared features and category co-members; e.g., muffin - cake. Using participant ratings and computational measures, we demonstrated distinct patterns across measures of similarity and co-occurrence, and familiarity for each relational construct in two different item sets. Overall, target RTs and priming magnitudes were consistent across the SOAs for both item sets. However, results of a standard lexical decision task with various delays between prime and target presentation further demonstrated distinct patterns among these three relations on some of the underlying measures influencing target word recognition (LSA, Google, and BEAGLE. These distinct patterns suggest different mechanisms of lexical priming and further demonstrate that integrative relations are distinct from thematic and taxonomic relations.

Contexto de produção e o estabelecimento da coerência na escrita de histórias por crianças Contexts of textual production and the construction of coherence in stories written by children

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Ana Paula Perdigão Pessoa

2010-01-01

Full Text Available O presente artigo examina a influência da escolaridade e do contexto de produção textual na escrita de histórias por crianças das primeiras séries do Ensino Fundamental. Na primeira condição, as crianças produziram uma história inventada por elas. Na segunda, as crianças foram orientadas a reproduzirem por escrito um conto clássico infantil. As histórias foram classificadas segundo níveis distintos e crescentes de complexidade narrativa e de coerência. A escolaridade e as condições de produção influenciaram o estabelecimento da coerência textual, sendo que o efeito do contexto de produção sobre a escrita de história não foi o mesmo para todas as crianças. A sensibilidade ao contexto de produção estaria relacionada ao grau de domínio de um esquema narrativo de histórias apresentado pela criança.This study examines the influence of schooling and the context of textual production on stories written by 1st and 2nd graders. In the first condition, children were asked to write original stories. In the second condition, they were asked to reproduce in writing a classical tale for children. The stories were classified according to the complexity and coherence of the narrative. Results indicate that schooling and condition of text production influenced the establishment of textual coherence. However, the effect of the contexts of textual production on children's writing was not the same for all children. Sensitivity to the contexts of text production seemed to have been related to children's awareness of narrative schema.

Taking Stock: Marie Nimier’s Textual Cabinet of Curiosities

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Adrienne Angelo

2014-01-01

Full Text Available In many life-writing projects, the seemingly innocuous description of heteroclite objects and how those objects are stored and recalled in fact plays an important role in demonstrating their importance to the process of memory work. At once the lingering traces of one’s past and also an aggregation of stories evoked by an examination of them, these curios focus attention on the relationship between the individual and the storage of memories. This article will focus on certain collectibles, collections and collectors that appear throughout the fictional, autobiographical and autofictional world that Marie Nimier has scripted to date. This textual cabinet of curiosities and the act of collecting more generally serve as a trope to connect memory with materiality, despite the numerous narrative voices that Nimier assumes—voices that move from a first-person “Marie Nimier” to an unnamed, although clearly identifiable first-person and even float between genders. Despite this nominal and narrational fluidity, objects function to guarantee recognition, both for the reader, and, especially, for the author herself. What is at stake in this intertextual assemblage of objects is not only the roles that they play in allowing the narrator to revisit past traumas and loss, but also in connecting the author’s presence to other, more fictionalized voices that above all signify the primacy of life-writing in her corpus.

Rapid action in the Palaeogene, the relationship between phenotypic and taxonomic diversification in Coenozoic mammals

Science.gov (United States)

Raia, P.; Carotenuto, F.; Passaro, F.; Piras, P.; Fulgione, D.; Werdelin, L.; Saarinen, J.; Fortelius, M.

2013-01-01

A classic question in evolutionary biology concerns the tempo and mode of lineage evolution. Considered variously in relation to resource utilization, intrinsic constraints or hierarchic level, the question of how evolutionary change occurs in general has continued to draw the attention of the field for over a century and a half. Here we use the largest species-level phylogeny of Coenozoic fossil mammals (1031 species) ever assembled and their body size estimates, to show that body size and taxonomic diversification rates declined from the origin of placentals towards the present, and very probably correlate to each other. These findings suggest that morphological and taxic diversifications of mammals occurred hierarchically, with major shifts in body size coinciding with the birth of large clades, followed by taxonomic diversification within these newly formed clades. As the clades expanded, rates of taxonomic diversification proceeded independently of phenotypic evolution. Such a dynamic is consistent with the idea, central to the Modern Synthesis, that mammals radiated adaptively, with the filling of adaptive zones following the radiation. PMID:23173207

Sistema de ejercicios para el desarrollo de la construcción textual en los estudiantes no hispanohablantes

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Guadalupe García González

2017-05-01

Full Text Available Esta investigación consiste en la elaboración de un sistema de ejercicios para el desarrollo de la construcción textual en los estudiantes del curso Preparatorio de la Escuela Latinoamericana de Medicina (ELAM, debido a que presentan dificultades en los componentes funcionales de la asignatura, especialmente para lograr la competencia en la comunicación escrita. La propuesta tiene como base teórica y metodológica el enfoque cognitivo, comunicativo y sociocultural porque permite el estudio de la lengua como un todo, mediante la integración de perspectivas abordadas por diferentes ramas de la lingüística. El objetivo de este trabajo consiste en elaborar un sistema de ejercicios para el trabajo con la construcción textual que contribuya al desarrollo de la competencia cognitiva, comunicativa y sociocultural de los estudiantes del Curso Preparatorio de la ELAM. Se utilizan métodos teóricos y empíricos entre los que se encuentran el analítico-sintético, la inducción-deducción, el histórico-lógico y el estudio documental. La propuesta de ejercicios permitirá elevar el nivel de construcción de los estudiantes del curso preparatorio ya que tiene en cuenta la integración de los componentes de la enseñanza de la lengua y se basa en situaciones comunicativas que motivan y obligan a los estudiantes a reflexionar acerca de los medios más adecuados para cada una de ellas.

Experiential Thinking in Creationism—A Textual Analysis

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Nieminen, Petteri; Ryökäs, Esko; Mustonen, Anne-Mari

2015-01-01

Creationism is a religiously motivated worldview in denial of biological evolution that has been very resistant to change. We performed a textual analysis by examining creationist and pro-evolutionary texts for aspects of “experiential thinking”, a cognitive process different from scientific thought. We observed characteristics of experiential thinking as follows: testimonials (present in 100% of sampled creationist texts), such as quotations, were a major form of proof. Confirmation bias (100% of sampled texts) was represented by ignoring or dismissing information that would contradict the creationist hypothesis. Scientifically irrelevant or flawed information was re-interpreted as relevant for the falsification of evolution (75–90% of sampled texts). Evolutionary theory was associated to moral issues by demonizing scientists and linking evolutionary theory to atrocities (63–93% of sampled texts). Pro-evolutionary rebuttals of creationist claims also contained testimonials (93% of sampled texts) and referred to moral implications (80% of sampled texts) but displayed lower prevalences of stereotypical thinking (47% of sampled texts), confirmation bias (27% of sampled texts) and pseudodiagnostics (7% of sampled texts). The aspects of experiential thinking could also be interpreted as argumentative fallacies. Testimonials lead, for instance, to ad hominem and appeals to authorities. Confirmation bias and simplification of data give rise to hasty generalizations and false dilemmas. Moral issues lead to guilt by association and appeals to consequences. Experiential thinking and fallacies can contribute to false beliefs and the persistence of the claims. We propose that science educators would benefit from the systematic analysis of experiential thinking patterns and fallacies in creationist texts and pro-evolutionary rebuttals in order to concentrate on scientific misconceptions instead of the scientifically irrelevant aspects of the creationist�

Experiential thinking in creationism--a textual analysis.

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Petteri Nieminen

Full Text Available Creationism is a religiously motivated worldview in denial of biological evolution that has been very resistant to change. We performed a textual analysis by examining creationist and pro-evolutionary texts for aspects of "experiential thinking", a cognitive process different from scientific thought. We observed characteristics of experiential thinking as follows: testimonials (present in 100% of sampled creationist texts, such as quotations, were a major form of proof. Confirmation bias (100% of sampled texts was represented by ignoring or dismissing information that would contradict the creationist hypothesis. Scientifically irrelevant or flawed information was re-interpreted as relevant for the falsification of evolution (75-90% of sampled texts. Evolutionary theory was associated to moral issues by demonizing scientists and linking evolutionary theory to atrocities (63-93% of sampled texts. Pro-evolutionary rebuttals of creationist claims also contained testimonials (93% of sampled texts and referred to moral implications (80% of sampled texts but displayed lower prevalences of stereotypical thinking (47% of sampled texts, confirmation bias (27% of sampled texts and pseudodiagnostics (7% of sampled texts. The aspects of experiential thinking could also be interpreted as argumentative fallacies. Testimonials lead, for instance, to ad hominem and appeals to authorities. Confirmation bias and simplification of data give rise to hasty generalizations and false dilemmas. Moral issues lead to guilt by association and appeals to consequences. Experiential thinking and fallacies can contribute to false beliefs and the persistence of the claims. We propose that science educators would benefit from the systematic analysis of experiential thinking patterns and fallacies in creationist texts and pro-evolutionary rebuttals in order to concentrate on scientific misconceptions instead of the scientifically irrelevant aspects of the creationist

Solar-phase-angle effects on the taxonomic classification of asteroids

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Carvano, J.; Davallos, J.

2014-07-01

Asteroid taxonomy is the effort of grouping asteroids into classes based on similarities of a number of their observational properties. The most used properties include measurements of their spectral reflectance (by means of low-resolution spectra, spectro-photometry, or colors), and geometric albedo. The usefulness of asteroid taxonomic classes derived in this way relies on the assumption that the classes bear some correspondence to the mineralogy of the asteroids, and on the fact that such classification can be made using types of observations that presently are available to a large number of asteroids. Therefore, asteroid taxonomy can be used to infer trends in the distribution of compositions in the main belt and other populations, as an additional parameter in defining asteroid families, and as a selection tool to identify candidates for more detailed observations. However, the fact that the correspondence between taxonomic class and composition is far from perfect is still sometimes overlooked in the literature. Indeed, although a taxonomic classification narrows down the possible mineralogies of a given asteroid, it will seldom point univocally to one particular mineralogy. This happens for a number of reasons, some linked to the intrinsic difficulty involved in the remote characterization of the mineralogy of an asteroid, since it depends on the presence of absorption bands in its reflectance spectrum which may be absent or not completely sampled by the observations used to derive taxonomy. Other problem here is the exposure of the material on the surface of the asteroid to space-weathering effects, such as solar wind implantation and micro-meteorite bombardment, which can change the optical properties of the material. Finally, the overall shape of the reflectance spectrum of an asteroid is also affected by the geometry of the observation, as well as by its shape. In this work, we analyze how the classification of asteroids observed by the Sloan Digital Sky

Taxonomic distinctness and richness of helminth parasite assemblages of freshwater fishes in Mexican hydrological basins.

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Quiroz-Martínez, Benjamín; Salgado-Maldonado, Guillermo

2013-01-01

In this paper, we analyse the distributional patterns of adult helminth parasites of freshwater fishes with respect to the main hydrological basins of Mexico. We use the taxonomic distinctness and the variation in taxonomic distinctness to explore patterns of parasite diversity and how these patterns change between zoogeographical regions. We address questions about the factors that determine the variation of observed diversity of helminths between basins. We also investigate patterns of richness, taxonomic distinctness and distance decay of similarity amongst basins. Our analyses suggest that the evolution of the fauna of helminth parasites in Mexico is mostly dominated by independent host colonization events and that intra--host speciation could be a minor factor explaining the origin of this diversity. This paper points out a clear separation between the helminth faunas of northern--nearctic and southern--neotropical components in Mexican continental waters, suggesting the availability of two distinct taxonomic pools of parasites in Mexican drainage basins. Data identifies Mexican drainage basins as unities inhabited by freshwater fishes, hosting a mixture of neotropical and nearctic species, in addition, data confirms neotropical and neartic basins/helminth faunas. The neotropical basins of Mexico are host to a richest and more diversified helminth fauna, including more families, genera and species, compared to the less rich and less diverse helminth fauna in the nearctic basins. The present analysis confirms distance--decay as one of the important factors contributing to the patterns of diversity observed. The hypothesis that helminth diversity could be explained by the ichthyological diversity of the basin received no support from present analysis.

Taxonomic distinctness and richness of helminth parasite assemblages of freshwater fishes in Mexican hydrological basins.

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Benjamín Quiroz-Martínez

Full Text Available In this paper, we analyse the distributional patterns of adult helminth parasites of freshwater fishes with respect to the main hydrological basins of Mexico. We use the taxonomic distinctness and the variation in taxonomic distinctness to explore patterns of parasite diversity and how these patterns change between zoogeographical regions. We address questions about the factors that determine the variation of observed diversity of helminths between basins. We also investigate patterns of richness, taxonomic distinctness and distance decay of similarity amongst basins. Our analyses suggest that the evolution of the fauna of helminth parasites in Mexico is mostly dominated by independent host colonization events and that intra--host speciation could be a minor factor explaining the origin of this diversity. This paper points out a clear separation between the helminth faunas of northern--nearctic and southern--neotropical components in Mexican continental waters, suggesting the availability of two distinct taxonomic pools of parasites in Mexican drainage basins. Data identifies Mexican drainage basins as unities inhabited by freshwater fishes, hosting a mixture of neotropical and nearctic species, in addition, data confirms neotropical and neartic basins/helminth faunas. The neotropical basins of Mexico are host to a richest and more diversified helminth fauna, including more families, genera and species, compared to the less rich and less diverse helminth fauna in the nearctic basins. The present analysis confirms distance--decay as one of the important factors contributing to the patterns of diversity observed. The hypothesis that helminth diversity could be explained by the ichthyological diversity of the basin received no support from present analysis.

Intertextualidade e produção textual: análise das narrativas do CELLIJ

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Edna Mara da Silva de Souza

2013-12-01

Full Text Available The textual construction already stated Bakhtin (2006 is permeated with intertextuality, ie a text takes from other texts, from this perspective, this study examines the intertextuality and the representation of narrative structure presented by students who participated in the workshops creative production of texts after storytime at the Centre for Studies in Reading and Children's and Youth Literature Betty Maria Coelho Silva (CELLIJ at UNESP campus of Presidente Prudente - SP. This paper presents a reflection on the importance of offering new narratives, whether through storytelling or reading literary texts, to build the child repertoire. From the reading of the corpus nine selected texts, we observed a strong influence of the heroes of commercial films and television series in child production, as well as a tendency writing conditional structure of fairy tales.

El hipertexto en la Enseñanza Media en Chile: ¿Es pertinente aplicar los enfoques textuales tradicionales?

OpenAIRE

Teresa Ayala Pérez

2012-01-01

Los textos digitales constituyen parte importante de la comunicación en la sociedad de la información y recientemente han sido incluidos en los programas de Lenguaje y Comunicación de E.M. en Chile. Ante esta situación, cabe preguntarse si los tradicionales enfoques textuales, elaborados a partir del texto impreso en los años 70 y 80 y utilizados actualmente en Enseñanza Media, resultan aplicables al hipertexto. En este trabajo se describen algunos rasgos de este tipo de texto y se reflexiona...

Research review: evaluating and reformulating the developmental taxonomic theory of antisocial behaviour.

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Fairchild, Graeme; van Goozen, Stephanie H M; Calder, Andrew J; Goodyer, Ian M

2013-09-01

The developmental taxonomic theory proposes that there are two subtypes of antisocial behaviour. The first is a neurodevelopmental disorder which emerges in early childhood and follows a life-course persistent course, whereas the second emerges in adolescence, remits in early adulthood and reflects peer processes such as mimicry of antisocial peers. The aim of this review was to evaluate the developmental taxonomic theory in the light of recent empirical research. We conducted a comprehensive literature review comparing these subtypes of antisocial behaviour based on searches on PubMed and other scientific databases covering the period from 1993 to 2013. We focused on research encompassing psychiatric epidemiology, personality assessment, neuropsychology, neuroendocrinology, genetics, and structural and functional neuroimaging. Sixty one empirical studies were identified that investigated one of these forms of antisocial behaviour separately or explicitly compared childhood-onset and adolescence-onset forms of antisocial behaviour. Empirical research provides support for the hypothesis that life-course persistent antisocial behaviour is a neurodevelopmental disorder which emerges in the transactions between individual vulnerabilities and environmental adversity. In contrast to the developmental taxonomic theory, however, empirical findings suggest that severe antisocial behaviour that emerges in adolescence frequently has a negative prognosis and is rarely limited to the adolescent period. In addition, both forms of antisocial behaviour are associated with emotion processing deficits, changes in brain structure and function, alterations in cortisol secretion, and atypical personality traits (such as increased callous-unemotional traits). We conclude that the developmental taxonomic theory is in need of revision, as differences between life-course persistent and adolescence-onset forms of antisocial behaviour appear to be quantitative, rather than qualitative, in

Barcoding snakeheads (Teleostei, Channidae) revisited: Discovering greater species diversity and resolving perpetuated taxonomic confusions

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Conte-Grand, Cecilia; Britz, Ralf; Dahanukar, Neelesh; Raghavan, Rajeev; Pethiyagoda, Rohan; Tan, Heok Hui; Hadiaty, Renny K.; Yaakob, Norsham S.

2017-01-01

Snakehead fishes of the family Channidae are predatory freshwater teleosts from Africa and Asia comprising 38 valid species. Snakeheads are important food fishes (aquaculture, live food trade) and have been introduced widely with several species becoming highly invasive. A channid barcode library was recently assembled by Serrao and co-workers to better detect and identify potential and established invasive snakehead species outside their native range. Comparing our own recent phylogenetic results of this taxonomically confusing group with those previously reported revealed several inconsistencies that prompted us to expand and improve on previous studies. By generating 343 novel snakehead coxI sequences and combining them with an additional 434 coxI sequences from GenBank we highlight several problems with previous efforts towards the assembly of a snakehead reference barcode library. We found that 16.3% of the channid coxI sequences deposited in GenBank are based on misidentifications. With the inclusion of our own data we were, however, able to solve these cases of perpetuated taxonomic confusion. Different species delimitation approaches we employed (BIN, GMYC, and PTP) were congruent in suggesting a potentially much higher species diversity within snakeheads than currently recognized. In total, 90 BINs were recovered and within a total of 15 currently recognized species multiple BINs were identified. This higher species diversity is mostly due to either the incorporation of undescribed, narrow range, endemics from the Eastern Himalaya biodiversity hotspot or the incorporation of several widespread species characterized by deep genetic splits between geographically well-defined lineages. In the latter case, over-lumping in the past has deflated the actual species numbers. Further integrative approaches are clearly needed for providing a better taxonomic understanding of snakehead diversity, new species descriptions and taxonomic revisions of the group. PMID

High taxonomic diversity of cultivation-recalcitrant endophytic bacteria in grapevine field shoots, their in vitro introduction, and unsuspected persistence.

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Thomas, Pious; Sekhar, Aparna C; Shaik, Sadiq Pasha

2017-11-01

Molecular and microscopic analyses reveal enormous non-cultivable endophytic bacteria in grapevine field shoots with functional significance. Diverse bacteria enter tissue cultures through surface-sterilized tissues and survive surreptitiously with varying taxonomic realignments. The study was envisaged to assess the extent of endophytic bacterial association with field shoot tissues of grapevine and the likelihood of introduction of such internally colonizing bacteria in vitro adopting molecular techniques targeting the non-cultivable bacterial community. PowerFood ® -kit derived DNA from surface-sterilized field shoot tips of grapevine Flame Seedless was employed in a preliminary bacterial class-specific PCR screening proving positive for major prokaryotic taxa including Archaea. Taxonomic and functional diversity were analyzed through whole metagenome profiling (WMG) which revealed predominantly phylum Actinobacteria, Proteobacteria, and minor shares of Firmicutes, Bacteroidetes, and Deinococcus-Thermus with varying functional roles ascribable to the whole bacterial community. Field shoot tip tissues and callus derived from stem segments were further employed in 16S rRNA V3-V4 amplicon taxonomic profiling. This revealed elevated taxonomic diversity in field shoots over WMG, predominantly Proteobacteria succeeded by Actinobacteria, Firmicutes, Bacteroidetes, and 15 other phyla including several candidate phyla (135 families, 179 genera). Callus stocks also displayed broad bacterial diversity (16 phyla; 96 families; 141 genera) bearing resemblance to field tissues with Proteobacterial dominance but a reduction in its share, enrichment of Actinobacteria and Firmicutes, disappearance of some field-associated phyla and detection of a few additional taxonomic groups over field community. Similar results were documented during 16S V3-V4 amplicon taxonomic profiling on Thompson Seedless field shoot tip and callus tissues. Video microscopy on tissue homogenates

A taxonomic, phylogenetic and biogeographic study of the genus Acanthophora (Rhodomelaceae, Rhodophyta)

NARCIS (Netherlands)

Jong, de Yde S.D.M.; Hitipeuw, Creusa; Prud’homme van Reine, Willem F.

1999-01-01

A cladistic analysis, based on a taxonomic revision is carried out for 7 Acanthophora species using 19 characters. Hypotheses on species affinities are based primarily on morphological characters. Because most species show only few distinctive characters, emphasis was placed on features of spine

Guidelines for quality assurance and quality control of fish taxonomic data collected as part of the National Water-Quality Assessment Program

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Walsh, Stephen Joseph; Meador, Michael R.

1998-01-01

Fish community structure is characterized by the U.S. Geological Survey's National Water-Quality Assessment (NAWQA) Program as part of a perennial, multidisciplinary approach to evaluating the physical, chemical, and biological conditions of the Nation's water resources. The objective of quality assurance and quality control of fish taxonomic data that are collected as part of the NAWQA Program is to establish uniform guidelines and protocols for the identification, processing, and archiving of fish specimens to ensure that accurate and reliable data are collected. Study unit biologists, collaborating with regional biologists and fish taxonomic specialists, prepare a pre-sampling study plan that includes a preliminary faunal list and identification of an ichthyological curation center for receiving preserved fish specimens. Problematic taxonomic issues and protected taxa also are identified in the study plan, and collecting permits are obtained in advance of sampling activities. Taxonomic specialists are selected to identify fish specimens in the field and to assist in determining what fish specimens should be sacrificed, fixed, and preserved for laboratory identification, independent taxonomic verification, and long-term storage in reference or voucher collections. Quantitative and qualitative sampling of fishes follows standard methods previously established for the NAWQA Program. Common ichthyological techniques are used to process samples in the field and prepare fish specimens to be returned to the laboratory or sent to an institutional repository. Taxonomic identifications are reported by using a standardized list of scientific names that provides nomenclatural consistency and uniformity across study units.

Floral Volatiles in Parasitic Plants of the Orobanchaceae. Ecological and Taxonomic Implications

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Tóth, Peter; Undas, Anna K.; Verstappen, Francel; Bouwmeester, Harro

2016-01-01

The holoparasitic broomrapes, Orobanche spp. and Phelipanche spp. (Orobanchaceae), are root parasites that completely depend on a host plant for survival and reproduction. There is considerable controversy on the taxonomy of this biologically and agronomically important family. Flowers of over 25 parasitic Orobanchaceae and a number of close, parasitic and non-parasitic, relatives emitted a complex blend of volatile organic compounds (VOCs), consisting of over 130 VOCs per species. Floral VOC blend-based phylogeny supported the known taxonomy in internal taxonomic grouping of genus and eliminated the uncertainty in some taxonomical groups. Moreover, phylogenetic analysis suggested separation of the broomrapes into two main groups parasitizing annual and perennial hosts, and for the annual hosts, into weedy and non-weedy broomrapes. We conclude that floral VOCs are a significant tool in species identification and possibly even in defining new species and can help to improve controversial taxonomy in the Orobanchaceae. PMID:27014329

Spatial and compositional variation in the fungal communities of organic and conventionally grown apple fruit at the consumer point-of-purchase.

Science.gov (United States)

Abdelfattah, Ahmed; Wisniewski, Michael; Droby, Samir; Schena, Leonardo

2016-01-01

The fungal diversity in harvested apples from organic or conventional management practices was analyzed in different fruit locations (stem end, calyx end, peel, and wounded flesh) shortly after fruit purchase (T1) and after 2 weeks of storage (T5). A total of 5,760,162 high-quality fungal sequences were recovered and assigned to 8,504 Operational Taxonomic Units. Members of the phylum Ascomycota were dominant in all samples and accounted for 91.6% of the total number of detected sequences. This was followed by Basidiomycota (8%), Chytridiomycota (0.1%), and unidentified fungi (0.3%). Alpha and beta diversity analyses revealed the presence of significantly different fungal populations in the investigated fruit parts. Among detected fungi, the genus Penicillium prevailed in the peel and in the wounded flesh while Alternaria spp. prevailed in the calyx and stem end samples that included apple core tissues. Several taxonomic units that appear to be closely related to pathogenic fungi associated with secondary human infections were present in peel and wounds. Moreover, significantly different populations were revealed in organic and conventional apples and this result was consistent in all investigated fruit parts (calyx end, peel, stem end, and wounded flesh). Several unique taxa were exclusively detected in organic apples suggesting that management practices may have been a contributing factor in determining the taxa present. In contrast, little differences were revealed in the two assessment times (T1 and T5). Results of the present study represent an advancement of the current knowledge on the fungal microbiota in collected fruit tissues of apple.

Resolving prokaryotic taxonomy without rRNA: longer oligonucleotide word lengths improve genome and metagenome taxonomic classification.

Science.gov (United States)

Alsop, Eric B; Raymond, Jason

2013-01-01

Oligonucleotide signatures, especially tetranucleotide signatures, have been used as method for homology binning by exploiting an organism's inherent biases towards the use of specific oligonucleotide words. Tetranucleotide signatures have been especially useful in environmental metagenomics samples as many of these samples contain organisms from poorly classified phyla which cannot be easily identified using traditional homology methods, including NCBI BLAST. This study examines oligonucleotide signatures across 1,424 completed genomes from across the tree of life, substantially expanding upon previous work. A comprehensive analysis of mononucleotide through nonanucleotide word lengths suggests that longer word lengths substantially improve the classification of DNA fragments across a range of sizes of relevance to high throughput sequencing. We find that, at present, heptanucleotide signatures represent an optimal balance between prediction accuracy and computational time for resolving taxonomy using both genomic and metagenomic fragments. We directly compare the ability of tetranucleotide and heptanucleotide world lengths (tetranucleotide signatures are the current standard for oligonucleotide word usage analyses) for taxonomic binning of metagenome reads. We present evidence that heptanucleotide word lengths consistently provide more taxonomic resolving power, particularly in distinguishing between closely related organisms that are often present in metagenomic samples. This implies that longer oligonucleotide word lengths should replace tetranucleotide signatures for most analyses. Finally, we show that the application of longer word lengths to metagenomic datasets leads to more accurate taxonomic binning of DNA scaffolds and have the potential to substantially improve taxonomic assignment and assembly of metagenomic data.

Resolving prokaryotic taxonomy without rRNA: longer oligonucleotide word lengths improve genome and metagenome taxonomic classification.

Directory of Open Access Journals (Sweden)

Eric B Alsop

Full Text Available Oligonucleotide signatures, especially tetranucleotide signatures, have been used as method for homology binning by exploiting an organism's inherent biases towards the use of specific oligonucleotide words. Tetranucleotide signatures have been especially useful in environmental metagenomics samples as many of these samples contain organisms from poorly classified phyla which cannot be easily identified using traditional homology methods, including NCBI BLAST. This study examines oligonucleotide signatures across 1,424 completed genomes from across the tree of life, substantially expanding upon previous work. A comprehensive analysis of mononucleotide through nonanucleotide word lengths suggests that longer word lengths substantially improve the classification of DNA fragments across a range of sizes of relevance to high throughput sequencing. We find that, at present, heptanucleotide signatures represent an optimal balance between prediction accuracy and computational time for resolving taxonomy using both genomic and metagenomic fragments. We directly compare the ability of tetranucleotide and heptanucleotide world lengths (tetranucleotide signatures are the current standard for oligonucleotide word usage analyses for taxonomic binning of metagenome reads. We present evidence that heptanucleotide word lengths consistently provide more taxonomic resolving power, particularly in distinguishing between closely related organisms that are often present in metagenomic samples. This implies that longer oligonucleotide word lengths should replace tetranucleotide signatures for most analyses. Finally, we show that the application of longer word lengths to metagenomic datasets leads to more accurate taxonomic binning of DNA scaffolds and have the potential to substantially improve taxonomic assignment and assembly of metagenomic data.

Taxonomic uncertainty and the loss of biodiversity on Christmas Island, Indian Ocean.

Science.gov (United States)

Eldridge, Mark D B; Meek, Paul D; Johnson, Rebecca N

2014-04-01

The taxonomic uniqueness of island populations is often uncertain which hinders effective prioritization for conservation. The Christmas Island shrew (Crocidura attenuata trichura) is the only member of the highly speciose eutherian family Soricidae recorded from Australia. It is currently classified as a subspecies of the Asian gray or long-tailed shrew (C. attenuata), although it was originally described as a subspecies of the southeast Asian white-toothed shrew (C. fuliginosa). The Christmas Island shrew is currently listed as endangered and has not been recorded in the wild since 1984-1985, when 2 specimens were collected after an 80-year absence. We aimed to obtain DNA sequence data for cytochrome b (cytb) from Christmas Island shrew museum specimens to determine their taxonomic affinities and to confirm the identity of the 1980s specimens. The Cytb sequences from 5, 1898 specimens and a 1985 specimen were identical. In addition, the Christmas Island shrew cytb sequence was divergent at the species level from all available Crocidura cytb sequences. Rather than a population of a widespread species, current evidence suggests the Christmas Island shrew is a critically endangered endemic species, C. trichura, and a high priority for conservation. As the decisions typically required to save declining species can be delayed or deferred if the taxonomic status of the population in question is uncertain, it is hoped that the history of the Christmas Island shrew will encourage the clarification of taxonomy to be seen as an important first step in initiating informed and effective conservation action. © 2013 Society for Conservation Biology.

Notes on the taxonomic position of several species of the genus Diphascon (Tardigrada, Hypsibiidae).

Science.gov (United States)

Tumanov, Denis V

2018-03-20

For this paper I analysed the descriptions of all species, attributed to the genus Diphascon Plate, 1889, to ascertain if they fit the diagnosis of this genus, provided by Bertolani et al. 2014. Thirty four species (the majority of the species diversity classified within the genus) fully match its emended diagnosis, while three: Diphascon opisthoglyptum Maucci, 1987, Diphascon procerum Pilato, Sabella Lisi, 2014 and Diphascon ziliense Lisi, Sabella Pilato, 2014, demonstrate a combination of characters, typical to the genus Pilatobius Bertolani et al., 2014. I propose the transfer these three species to the genus Pilatobius, thus their new taxonomic positions are as follows: Pilatobius opisthoglyptus (Maucci, 1987) comb. nov., Pilatobius procerus (Pilato, Sabella Lisi, 2014) comb. nov. and Pilatobius ziliense (Lisi, Sabella Pilato, 2014) comb. nov. Descriptions of three other Diphascon species (Diphascon mariae (Mihelčič, 1951), Diphascon rivulare (Mihelčič, 1967) and Diphascon punctatum (Iharos, 1962)) contain too little detail to conclude on their taxonomic position. The species Pilatobius halapiense (Iharos, 1964) was erroneously transferred from the genus Diphascon, and here I suggest it is transferred back to Diphascon. The new taxonomic position of this species is: Diphascon halapiense (Iharos, 1964) comb. nov. Emended list of species, attributed to the genus Diphascon is given.

Flexible taxonomic assignment of ambiguous sequencing reads

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Jansson Jesper

2011-01-01

Full Text Available Abstract Background To characterize the diversity of bacterial populations in metagenomic studies, sequencing reads need to be accurately assigned to taxonomic units in a given reference taxonomy. Reads that cannot be reliably assigned to a unique leaf in the taxonomy (ambiguous reads are typically assigned to the lowest common ancestor of the set of species that match it. This introduces a potentially severe error in the estimation of bacteria present in the sample due to false positives, since all species in the subtree rooted at the ancestor are implicitly assigned to the read even though many of them may not match it. Results We present a method that maps each read to a node in the taxonomy that minimizes a penalty score while balancing the relevance of precision and recall in the assignment through a parameter q. This mapping can be obtained in time linear in the number of matching sequences, because LCA queries to the reference taxonomy take constant time. When applied to six different metagenomic datasets, our algorithm produces different taxonomic distributions depending on whether coverage or precision is maximized. Including information on the quality of the reads reduces the number of unassigned reads but increases the number of ambiguous reads, stressing the relevance of our method. Finally, two measures of performance are described and results with a set of artificially generated datasets are discussed. Conclusions The assignment strategy of sequencing reads introduced in this paper is a versatile and a quick method to study bacterial communities. The bacterial composition of the analyzed samples can vary significantly depending on how ambiguous reads are assigned depending on the value of the q parameter. Validation of our results in an artificial dataset confirm that a combination of values of q produces the most accurate results.

Una taxonomía de modelos de desarrollo sustentable

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Darcy Tetreault

2004-01-01

Full Text Available Este ensayo pretende ayudar a desenmarañar una parte del discurso sobre desarrollo sustentable mediante la construcción de una taxonomía de modelos de desarrollo sustentable. La misma taxonomía se basa en una revisión literaria extensiva que en cierta medida privilegia la experiencia mexicana. De este modo, el ensayo presenta y compara tanto modelos normativos como positivos. Los modelos incluidos son el modelo dominante, el cual corresponde con la estrategia esbozada en el Informe Bruntland y Agenda 21; la ecología política, un modelo desarrollado por el economista francés Alain Lipietz; el modelo comunitario de desarrollo sustentable, cuyas raíces se encuentran en una escuela de pensamiento de la década de los setenta conocida como el “otro desarrollo”; el comercio justo, una experiencia cuyas raíces se encuentran en las comunidades indígenas de Oaxaca; la producción forestal industrial comunitaria, que ha sido puesta en práctica por varias comunidades forestales en el sur y el centro del país; el activismo ambiental, sobre todo respecto a los con- fl ictos locales que giran en torno al control de los recursos naturales; y la conservación basada en la comunidad, cuya manifestación principal es la reserva de la biosfera

Phylogenetic analysis and taxonomic revision of Physodactylinae (Coleoptera, Elateridae

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Simone Policena Rosa

2014-01-01

Full Text Available A phylogeny based on male morphological characters and taxonomic revision of the Physodactylinae genera are presented. The phylogenetic analysis based on 66 male characters resulted in the polyphyly of Physodactylinae which comprises four independent lineages. Oligostethius and Idiotropia from Africa were found to be sister groups. Teslasena from Brazil was corroborated as belonging to Cardiophorinae clade. The South American genera Physodactylus and Dactylophysus were found to be sister groups and phylogenetically related to Heterocrepidius species. The Oriental Toxognathus resulted as sister group of that clade plus (Dicrepidius ramicornis (Lissomus sp, Physorhynus erythrocephalus. Taxonomic revisions include diagnoses and redescriptions of genera and distributional records and illustrations of species. Key to species of Teslasena, Toxognathus, Dactylophysus and Physodactylus are also provided. Teslasena lucasi is synonymized with T. femoralis. A new species of Dactylophysus is described, D. hirtus sp. nov., and lectotypes are designated to non-conspecific D. mendax sensu Fleutiaux and Heterocrepidius mendax Candèze. Physodactylus niger is removed from synonymy under P. oberthuri; P. carreti is synonymized with P. niger; P. obesus and P. testaceus are synonymized with P. sulcatus. Nine new species are described in Physodactylus: P. asper sp. nov., P. brunneus sp. nov., P. chassaini sp. nov., P. flavifrons sp. nov., P. girardi sp. nov., P. gounellei sp. nov., P. latithorax sp. nov., P. patens sp. nov. and P. tuberculatus sp. nov.

O ENSINO DE PRODUÇÃO TEXTUAL EM FOCO: UMA LEITURA DE “MINHAS FÉRIAS, PULA UMA LINHA, PARÁGRAFO”, DE CHRISTIANE GRIBEL

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Francisco Vieira Silva

2014-02-01

Full Text Available O ensino de produção textual tem sido amplamente estudado por diversos autores interessados em compreender as concepções teóricas que norteiam as práticas pedagógicas dos docentes de língua materna nas aulas de produção. Desse modo, práticas que concebem a produção de texto como um produto (e não como um processo que requer diferentes etapas são desveladas a partir das pesquisas realizadas por diferentes autores em todo o país. O trabalho que ora apresentamos inscreve-se no rol dessas pesquisas, a partir do momento em que lança um olhar no sentido de compreender a perspectiva dita tradicional de produção de texto que, muitas vezes, prevalece na maior parte nas aulas de produção, bem como entender os efeitos que provêm dessa prática. Para tanto, interessa-nos discutir a concepção de produção de texto subjacente à obra literária “Minhas férias, pula uma linha, parágrafo” de Christiane Gribel. Nessa obra, a autora registra os dilemas de um garoto que retorna às aulas e precisa escrever a famosa redação, cujo título já se cristalizou como uma espécie de clichê: minhas férias. A obra traz à tona um debate acerca da percepção sobre a produção textual como uma atividade que não cumpre uma função sociocomunicativa, esvaziada de sentido, de modo que os textos produzidos pelos discentes não possuem leitores reais. Dessa maneira, procuraremos travar um diálogo entre a prática de produção que emerge da obra analisada e as concepções teóricas de autores como Bakhtin (2011 enfocando a noção de gênero discursivo, Marcuschi (2010, Bunzen (2006, Antunes (2003; 2006; 2009, Geraldi (2001, os PCN (2001, dentre outros. A partir da análise da obra, convém propor um direcionamento para a produção textual que leve em consideração a natureza sócio-histórica, discursiva e dialógica da linguagem, abarcando, pois, o estudo e a produção dos diferentes gêneros textuais existentes nas mais variadas

A taxonomic survey of Saudi Arabian Red Sea octocorals (Cnidaria: Alcyonacea)

KAUST Repository

Haverkort-Yeh, Roxanne D.

2013-05-04

A preliminary survey of Saudi Arabian Alcyonacea is presented, which combines classical taxonomy, multilocus molecular barcodes, and in situ photographs. We explored 14 locations along the west coast of the Kingdom of Saudi Arabia to assess the regional taxonomic diversity of non-gorgonian alcyonaceans. We collected samples from a total of 74 colonies, distributed among four families: 18 colonies of Alcyoniidae, 14 of Nephtheidae, 9 of Tubiporidae, and 33 of Xeniidae. We sequenced the octocorals using multiple nuclear [ribosomal Internal Transcribed Spacers (ITS) and ATP Synthetase Subunit α (ATPSα)] and mitochondrial [MutS homolog (mtMutS) and Cytochrome C Oxidase subunit one (COI)] loci, providing molecular barcodes which will: (1) allow direct comparison of biodiversity from this location to others for which molecular data are available, and (2) facilitate future identifications of these taxa. Finally, this preliminary phylogeny of sampled taxa provides insights on the resolution of mitochondrial versus nuclear loci, and highlights octocoral taxa that require further taxonomic attention. © 2013 Senckenberg Gesellschaft für Naturforschung and Springer-Verlag Berlin Heidelberg.

Floral Volatiles in Parasitic Plants of the Orobanchaceae. Ecological and Taxonomic Implications

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Peter eTóth

2016-03-01

Full Text Available The holoparasitic broomrapes, Orobanche spp. and Phelipanche spp. (Orobanchaceae, are root parasites that completely depend on a host plant for survival and reproduction. There is considerable controversy on the taxonomy of this biologically and agronomically important family. Flowers of over 25 parasitic Orobanchaceae and a number of close, parasitic and non-parasitic, relatives emitted a complex blend of volatile organic compounds (VOCs, consisting of over 130 VOCs per species. Floral VOC blend-based phylogeny supported the known taxonomy in internal taxonomic grouping of genus and eliminated the uncertainty in some taxonomical groups. Moreover, phylogenetic analysis suggested separation of the broomrapes into two main groups parasitizing annual and perennial hosts, and for the annual hosts, into weedy and non-weedy broomrapes. We conclude that floral VOCs are a significant tool in species identification and possibly even in defining new species and can help to improve controversial taxonomy in the Orobanchaceae.

Taxonomic history and invasion biology of two Phyllonorycter leaf miners (Lepidoptera: Gracillariidae) with links to taxonomic and molecular datasets.

Science.gov (United States)

De Prins, Jurate; De Prins, Willy; De Coninck, Eliane; Kawahara, Akito Y; Milton, Megan A; Hebert, Paul D N

2013-01-01

This paper deals with two European species, Phyllonorycter mespilella (Hübner, 1805) and P. trifasciella (Haworth, 1828), that have colonized the subtropical Canary Islands. The Rosaceae leaf miner, P. mespilella, is recorded for the first time from Lanzarote and La Palma, while the Caprifoliaceae leaf miner, P. trifasciella, is recorded from Tenerife. We present the diagnoses of these species based on morphology, a preliminary DNA barcode (COI) library of congeneric and con-familial species, and discuss the taxonomic position of the colonizers within the blancardella and trifasciella species groups. The recent intensification of anthropogenic disturbance likely accounts for their range expansion, an event that may impact the relict flora present on the Canary Islands.

The Japanese Amateur Textual Production Scene: Activities and Participation

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Alvaro David Hernández Hernández

2016-12-01

Full Text Available Animation, manga (Japanese comic books, and video games are some of the most popular media in Japan. The huge community of fans and amateur creators that concentrate twice a year at the massive event called Comic Market is one expression of this popularity. In this paper I focus on the Japanese culture of amateur manga, anime or other derivative texts, and present analysis of the way in which members relate to media texts and other members, in order to reveal two different orientations towards action within this culture: one that centers on individual activities, and the other on collective participation. To do this, I focus first on the Japanese amateur culture that is often called dōjin culture to find two basic perspectives. One regards this culture as forming communities or based on social interaction, and the other denies commonality in the relationships between members and stresses individual drive. Then, I focus on a similar distinction that shapes the main discourses concerning Japanese subculture and otaku, both categories within which dōjin culture can be categorized. Here I pay particular attention to two different orientations towards the value of media texts, which provide a reference for understanding the aforementioned opposition between commonality and individuality. In my conclusions, I suggest that this amateur culture can be regarded as an institution of textual appropriation, shaped by two orientations: activities and participation. 

Automatic identification of optimal marker genes for phenotypic and taxonomic groups of microorganisms.

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Elad Segev

Full Text Available Finding optimal markers for microorganisms important in the medical, agricultural, environmental or ecological fields is of great importance. Thousands of complete microbial genomes now available allow us, for the first time, to exhaustively identify marker proteins for groups of microbial organisms. In this work, we model the biological task as the well-known mathematical "hitting set" problem, solving it based on both greedy and randomized approximation algorithms. We identify unique markers for 17 phenotypic and taxonomic microbial groups, including proteins related to the nitrite reductase enzyme as markers for the non-anammox nitrifying bacteria group, and two transcription regulation proteins, nusG and yhiF, as markers for the Archaea and Escherichia/Shigella taxonomic groups, respectively. Additionally, we identify marker proteins for three subtypes of pathogenic E. coli, which previously had no known optimal markers. Practically, depending on the completeness of the database this algorithm can be used for identification of marker genes for any microbial group, these marker genes may be prime candidates for the understanding of the genetic basis of the group's phenotype or to help discover novel functions which are uniquely shared among a group of microbes. We show that our method is both theoretically and practically efficient, while establishing an upper bound on its time complexity and approximation ratio; thus, it promises to remain efficient and permit the identification of marker proteins that are specific to phenotypic or taxonomic groups, even as more and more bacterial genomes are being sequenced.

Telling the Holy Sepulchre. “Mises en scène” and textual representations

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Hans-Joachim Schmidt

2016-06-01

Full Text Available During the Middle Ages, places and holy objects were concrete in their materiality and especially in their geographical location. However they could also proliferate in other places, in a real “multiplication of presence”. Indeed, texts and maps informed the reader and the spectator, but also put him in touch with the sphere of the holiness. The idea of the omnipresence of the salvation facilitated a relocation of the poles of worship, which was nevertheless based on material contacts. This contrast between dematerialization and attachment to things maintained a play of opposites between absence and presence. The material or textual reproduction of objects and holy places made sure they became accessible for all those who would not or could not travel to them. This contribution offers an analysis of maps and various stories of medieval authors which make a symbolic approach to the holy places in Jerusalem accessible to many believers.

Dis/Graceful Liberties: Textual Libertinism/ Libertine Texts in J.M. Coetzee’s Disgrace

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Driss Hager Ben

2017-12-01

Full Text Available This essay addresses J.M. Coetzee’s Disgrace, a Booker Prize winner in 1999. The novel captures South African political and cultural turmoil attending the post-apartheid transitional period. Far from overlooking the political allegory, I propose instead to expand on a topic only cursorily developed elsewhere, namely liberty and license. The two terms foreground the textual dynamics of the novel as they compete and/or negotiate meaning and ascendency. I argue that Disgrace is energized by Coetzee’s belief in a total liberty of artistic production. Sex is philosophically problematized in the text and advocated as a serious issue that deserves artistic investigation without restriction or censorship. This essay looks into the subtle libertinism in Coetzee’s text, which displays pornographic overtones without exhibiting a flamboyant libertinage. Disgrace acquires its libertine gesture from its dialogue with several literary works steeped in libertinism. The troubled relationship between the aesthetic and the ethical yields an ambiguous text that invites a responsible act of reading.

Chawton Novels Online, Women’s Writing 1751-1834 and Computer-Aided Textual Analysis

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Anne Bandry-Scubbi

2015-10-01

Full Text Available Using Chawton House Library’s “Novels Online,” several corpora have been set up for a computer-aided textual analysis of the use of vocabulary by women writing “domestic novels” from 1752 to 1834. This corpus stylistics approach makes it possible to map texts according to their word usage and to identify quantitative keywords which provide vocabulary profiles through comparison and contrast with contemporary male and female canonical texts. Items identified include pronouns, markers of dialogue and of intensity; others can be grouped into specific lexical fields such as feelings. One text from the collection then forms the object of a case-study to explore a paradox: although Jane Taylor’s use of vocabulary in her 1817 Rachel appears the most representative of the corpus made up of 42 novels by women, this Chawton text has been called “a highly original tale.” Methodology and findings are both presented to address the challenge of identifying features which constitute typicality.

Location and Unlocation: Examining Gender and Telephony through Autoethnographic Textual and Visual Methods

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Lia Bryant BSW, PhD in Sociology

2013-02-01

Full Text Available Studies on gender and telephony tend to be quantitative and depict the purposes for which women and men use mobile telephones and landlines. Qualitative studies on the topic predominantly rely on face-to-face interviews to examine how telephone use genders space. We suggest these traditional methods of data collection leave unexamined the emotional and social relationships that emerge and are enabled by telephone use, which at times reconfigure and gender social spaces. In this article we present a collaborative autoethnographic inquiry based on our own telephone lives. We introduce a reflexive visual and textual methodological design, specifically diary notes, memory work, and photography, developed from our lives as researcher and researched. We examine an important theme in our findings, the physical placement of the telephone and the phone holder's awareness of the physicality of the telephone, which illustrates the importance of our methodological choices. We show how the placement of the phone by the users both genders space and creates emotional spaces.

Zooplankton taxonomic and size diversity in Mediterranean coastal lagoons (NE Iberian Peninsula): Influence of hydrology, nutrient composition, food resource availability and predation

Science.gov (United States)

Badosa, Anna; Boix, Dani; Brucet, Sandra; López-Flores, Rocío; Gascón, Stéphanie; Quintana, Xavier D.

2007-01-01

The influence of hydrology, nutrient composition, food resource availability and predation on zooplankton taxonomic and size diversity was analyzed in several shallow lagoons of a Mediterranean salt marsh (Baix Ter Wetlands, NE Iberian Peninsula). Taxonomic diversity correlated better with variables related to the trophic state, such as nutrient concentrations, whereas size diversity was more sensitive to fish predation. However, the fish predation influence on the size diversity was only significant when fishes reached high densities. Under low fish densities no predation effects were observed and the food resource availability (FR a) appeared to be more important in structuring the zooplankton community. Nevertheless, the two diversity indexes showed opposite responses to this factor. With increasing FR a the taxonomic diversity increased and the size diversity decreased. Neither taxonomic nor size diversity of the zooplankton community correlated with other physical or biotic factors such as hydrological variability or macroinvertebrate predation. The relationships found suggest that the size diversity is mainly related to biotic interactions, such as fish predation or inter/intraspecific competition, while the taxonomic diversity appears to be more sensitive to abiotic factors such as the nutrient composition.

Comparación visual de grandes jerarquías: El caso de las de taxonomías biológicas

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Liliana Sancho-Chavarría

2017-03-01

Full Text Available La visualización y el análisis de las taxonomías biológicas es un reto monumental: las taxonomías biológicas son voluminosas, pueden cambiar con el tiempo conforme la comunidad científica hace nuevos descubrimientos, la información taxonómica está dispersa en todo el mundo, está incompleta y existen diferentes versiones de las taxonomías ya que los científicos utilizan diferentes criterios de clasificación. Para entender y documentar mejor la biodiversidad, así como para apoyar su conservación, es necesario curar e integrar esta información. Es aquí donde la comparación de grandes jerarquías se convierte en una herramienta sumamente útil. Hasta el momento, la investigación sobre este tema incluye el estado del arte sobre la visualización de la información y técnicas de comparación de jerarquías, el desarrollo de una herramienta de visualización de jerarquías mediante la técnica de árboles de conos y la caracterización de las tareas del trabajo taxonómico que inducen cambios en las taxonomías. Se identificaron 10 tareas: identificar congruencia, identificar correcciones, identificar nuevos nodos, obtener una visión global de los cambios, resumir cambios, encontrar inconsistencias, aplicar filtros, obtener detalles, enfocarse y editar. La contribución de esta investigación es comparar y visualizar las taxonomías biológicas mediante la consideración sistemática de dicha caracterización de las tareas de los usuarios, lo cual es un enfoque novedoso para el desarrollo de propuestas de visualización en el dominio de taxonomías biológicas.

Multigene phylogeny and taxonomic revision of yeasts and related fungi in the Ustilaginomycotina

NARCIS (Netherlands)

Wang, Q. -M.; Begerow, D.; Groenewald, M.; Liu, X. -Z.; Theelen, B.; Bai, F. -Y.; Boekhout, T.

The subphylum Ustilaginomycotina (Basidiomycota, Fungi) comprises mainly plant pathogenic fungi (smuts). Some of the lineages possess cultivable unicellular stages that are usually classified as yeast or yeast-like species in a largely artificial taxonomic system which is independent from and

Support Vector Machine Based Tool for Plant Species Taxonomic Classification

OpenAIRE

Manimekalai .K; Vijaya.MS

2014-01-01

Plant species are living things and are generally categorized in terms of Domain, Kingdom, Phylum, Class, Order, Family, Genus and name of Species in a hierarchical fashion. This paper formulates the taxonomic leaf categorization problem as the hierarchical classification task and provides a suitable solution using a supervised learning technique namely support vector machine. Features are extracted from scanned images of plant leaves and trained using SVM. Only class, order, family of plants...

A taxonomic revision of the genus Rafnia Thunb. (Fabaceae, Crotalarieae)

OpenAIRE

2012-01-01

M.Sc. A taxonomic revision of the genus Rafnia Thunb. (= Oedmannia Thunb., Vascoa DC., Pelecynthis E. Mey), a relatively poorly known papilionoid legume genus, is presented. Rafnia (family Fabaceae, tribe Crotalarieae) is subendemic to the fynbos region of the Western and Eastern Cape Provinces of South Africa, with one species having a distribution area reaching into KwaZulu-Natal. The species delimitation has been unsatisfactory, and the relationships among the taxa uncertain. Rafnia is ...

A Nordic Approach to the Interpretation of the European Convention on Human Rights?

DEFF Research Database (Denmark)

Rytter, Jens Elo

2017-01-01

Based on dissenting opinions involvin gnordic judges, the article draws the contours of a common Nordic approach to the Interpretation of the ECHR, chcaracterized by reluctance to move beyond textual limits, reliance on preparatory works, and resistance towards imposing obligations in the political...

How do habitat filtering and niche conservatism affect community composition at different taxonomic resolutions?

Science.gov (United States)

Munoz, François; Ramesh, B R; Couteron, Pierre

2014-08-01

Understanding how local species assembly depends on the regional biogeographic and environmental context is a challenging task in community ecology. In spatially implicit neutral models, a single immigration parameter, I(k), represents the flux of immigrants from a regional pool that compete with local offspring for establishment in communities. This flux counterbalances the effect of local stochastic extinctions to maintain local species diversity. If some species within the regional pool are not adapted to the local environment (habitat filtering), the migrant flux is reduced beyond that of the neutral model, such that habitat filtering influences the value of I(k) in non-neutral situations. Here, we propose a novel model in which immigrants from the regional pool are filtered according to their habitat preferences and the local environment, while taxa potentially retain habitat preferences from their ancestors (niche conservatism). Using both analytical reasoning and simulations, we demonstrate that I(k) is expected to be constant when estimated based on the community composition at several taxonomic levels, not only under neutral assumptions, but also when habitat filtering occurs, unless there is substantial niche conservatism. In the latter case, I(k) is expected to decrease when estimated based on the composition at species to genus and family levels, thus allowing a signature of niche conservatism to be detected by simply comparing I(k) estimates across taxonomic levels. We applied this approach to three rain forest data sets from South India and Central America and found no significant signature of niche conservatism when I(k) was compared across taxonomic levels, except at the family level in South India. We further observed more limited immigration in South Indian forests, supporting the hypothesis of a greater impact of habitat filtering and heterogeneity there than in Central America. Our results highlight the relevance of studying variations of I

Variance Component Selection With Applications to Microbiome Taxonomic Data

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Jing Zhai

2018-03-01

Full Text Available High-throughput sequencing technology has enabled population-based studies of the role of the human microbiome in disease etiology and exposure response. Microbiome data are summarized as counts or composition of the bacterial taxa at different taxonomic levels. An important problem is to identify the bacterial taxa that are associated with a response. One method is to test the association of specific taxon with phenotypes in a linear mixed effect model, which incorporates phylogenetic information among bacterial communities. Another type of approaches consider all taxa in a joint model and achieves selection via penalization method, which ignores phylogenetic information. In this paper, we consider regression analysis by treating bacterial taxa at different level as multiple random effects. For each taxon, a kernel matrix is calculated based on distance measures in the phylogenetic tree and acts as one variance component in the joint model. Then taxonomic selection is achieved by the lasso (least absolute shrinkage and selection operator penalty on variance components. Our method integrates biological information into the variable selection problem and greatly improves selection accuracies. Simulation studies demonstrate the superiority of our methods versus existing methods, for example, group-lasso. Finally, we apply our method to a longitudinal microbiome study of Human Immunodeficiency Virus (HIV infected patients. We implement our method using the high performance computing language Julia. Software and detailed documentation are freely available at https://github.com/JingZhai63/VCselection.

The effect of taxonomic resolution on the assessment of ecological water quality classes

NARCIS (Netherlands)

Schmidt-Kloiber, A.; Nijboer, R.C.

2004-01-01

Within the ecological assessment of running waters based on benthic macroinvertebrates different levels of taxonomic resolution (species, genus, family and higher) are in use. Although assessment systems are often developed with detailed data on species level, water managers and other end-users

Taxonomic Study of Endemic Species of Astragalus L. (Fabaceae of India

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Lal Babu Chaudhary

2007-09-01

Full Text Available The goal of the study is to provide a comprehensive taxonomic account of 12 endemic species of Astragalus occurring in India. The north-west Himalayan region harbors more endemic species (11 spp. than eastern Himalaya where only two species have been noticed from Sikkim. Jammu & Kashmir with seven species occupies first position in the list of endemic species. Five species are strictly confined to Jammu & Kashmir, while two species to Uttaranchal and one species to Sikkim. Only one species (A. tenuicaulis is found in both the Himalayas, otherwise the elements of both the Himalayas are quite distinct from each other. Most of the endemic species of Astragalus have been observed quite rare in the nature except A. uttaranchalensis. In the present investigation, A. turgidus, a newly described species from Jammu & Kashmir, has been found conspecific to A. kashmirensis. For each species nomenclature, description, distribution, phenology, taxonomic notes, list of the investigated materials, distribution map and figures are given. A new combination A. falconeri var. pilosus (Ali Chaudhary has been proposed based on A. hoffmeisteri var. pilosus Ali. A new endemic species A. nainitalensis from Kumaon Himalaya has also been described here along with illustrations.

Lago Maggiore oligotrophication as seen from the long-term evolution of its phytoplankton taxonomic size structure

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Giuseppe MORABITO

2009-02-01

Full Text Available Due to the rapid and common deterioration of aquatic ecosystems, scientists and environmental protection organizations acutely need means capable of producing quantitative estimates for structural deformations of natural communities. Recently, very common biomass size spectra ignore community taxonomic composition, i.e., one of the most important kinds of biological information. Therefore, another very old, but rare in planktonology, method – the traditional taxonomic size spectrum (TTSS – can be helpful. TTSS, a specific form of size-frequency distribution of taxonomic units, reveals repeating patterns of deep subalpine Lago Maggiore (Italy phytoplankton taxonomic structure. The general TTSS pattern was safeguarded during 22 annual cycles (1984-2005, when many principal environmental characteristics were changed considerably during the lake oligotrophication. At the same time, the fine structure deformations of this pattern helped us divide the total oligotrophication process into several stages characterized by notable changes of TTSS peaks' proportions. These peak-height alterations were caused by pronounced changes in the species list and overall taxonomic diversity of the lake phytoplankton. The average cell volume decline was found. It was significantly correlated with the total phosphorus descending trend. This cell volume decline was produced by the addition of numerous species into the medium-and-small size fractions. Typical patterns of the stable and transitory stages were differentiated, which could be valuable for environmental protection and diagnostic applications. The central peak height difference between the stable and the transitory periods was statistically significant. Oligotrophication process decomposition into several more homogenous groups of years was supported by quantitative estimators produced by hierarchical cluster analysis. The highest level of the similarity measure (Pearson r in pairs of annual TTSS was

Utility-preserving privacy protection of textual healthcare documents.

Science.gov (United States)

Sánchez, David; Batet, Montserrat; Viejo, Alexandre

2014-12-01

The adoption of ITs by medical organisations makes possible the compilation of large amounts of healthcare data, which are quite often needed to be released to third parties for research or business purposes. Many of this data are of sensitive nature, because they may include patient-related documents such as electronic healthcare records. In order to protect the privacy of individuals, several legislations on healthcare data management, which state the kind of information that should be protected, have been defined. Traditionally, to meet with current legislations, a manual redaction process is applied to patient-related documents in order to remove or black-out sensitive terms. This process is costly and time-consuming and has the undesired side effect of severely reducing the utility of the released content. Automatic methods available in the literature usually propose ad-hoc solutions that are limited to protect specific types of structured information (e.g. e-mail addresses, social security numbers, etc.); as a result, they are hardly applicable to the sensitive entities stated in current regulations that do not present those structural regularities (e.g. diseases, symptoms, treatments, etc.). To tackle these limitations, in this paper we propose an automatic sanitisation method for textual medical documents (e.g. electronic healthcare records) that is able to protect, regardless of their structure, sensitive entities (e.g. diseases) and also those semantically related terms (e.g. symptoms) that may disclose the former ones. Contrary to redaction schemes based on term removal, our approach improves the utility of the protected output by replacing sensitive terms with appropriate generalisations retrieved from several medical and general-purpose knowledge bases. Experiments conducted on highly sensitive documents and in coherency with current regulations on healthcare data privacy show promising results in terms of the practical privacy and utility of the

Taxonomic and numerical resolutions of nepomorpha (insecta: heteroptera in cerrado streams.

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Nubia França da Silva Giehl

Full Text Available Transformations of natural landscapes and their biodiversity have become increasingly dramatic and intense, creating a demand for rapid and inexpensive methods to assess and monitor ecosystems, especially the most vulnerable ones, such as aquatic systems. The speed with which surveys can collect, identify, and describe ecological patterns is much slower than that of the loss of biodiversity. Thus, there is a tendency for higher-level taxonomic identification to be used, a practice that is justified by factors such as the cost-benefit ratio, and the lack of taxonomists and reliable information on species distributions and diversity. However, most of these studies do not evaluate the degree of representativeness obtained by different taxonomic resolutions. Given this demand, the present study aims to investigate the congruence between species-level and genus-level data for the infraorder Nepomorpha, based on taxonomic and numerical resolutions. We collected specimens of aquatic Nepomorpha from five streams of first to fourth order of magnitude in the Pindaíba River Basin in the Cerrado of the state of Mato Grosso, Brazil, totaling 20 sites. A principal coordinates analysis (PCoA applied to the data indicated that species-level and genus-level abundances were relatively similar (>80% similarity, although this similarity was reduced when compared with the presence/absence of genera (R = 0.77. The presence/absence ordinations of species and genera were similar to those recorded for their abundances (R = 0.95 and R = 0.74, respectively. The results indicate that analyses at the genus level may be used instead of species, given a loss of information of 11 to 19%, although congruence is higher when using abundance data instead of presence/absence. This analysis confirms that the use of the genus level data is a safe shortcut for environmental monitoring studies, although this approach must be treated with caution when the objectives include

Argumentation and Fallacies in Television Interviews: for a Dialogue Between the Toulmin Model and the Textual-Interactive Perspective

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Paulo Roberto Gonçalves Segundo

2016-12-01

Full Text Available Neste artigo, propomos uma articulação entre o modelo Toulmin de argumentação e a perspectiva textual-interativa para a análise de uma entrevista de televisão polêmica concedida pelo então candidato a prefeito de São Paulo, Fernando Haddad (PT, a César Tralli, no programa SPTV, da Rede Globo de Comunicações, em período de campanha eleitoral. A proposta justifica-se na medida em que o modelo Toulmin permite uma formalização esquemática da estrutura argumentativa que viabiliza uma análise crítica do processo, ao passo que a perspectiva textual-interativa possibilita compreender a dinâmica de produção e interpretação locais de sentido no texto conversacional, fornecendo ferramentas explanatórias para a construção do esquema argumentativo, o que envolve a variabilidade na explicitação dos componentes do modelo e na configuração de suas relações recíprocas. Pudemos depreender as tendências de: (1 o entrevistador construir a Alegação sob forma de pergunta, de forma a incitar que a resposta consista em uma Refutação, processo permeado por uma dinâmica de preservação da própria face, da face do entrevistador e do Partido dos Trabalhadores (PT, na qual o entrevistado busca caracterizar o raciocínio do âncora como falacioso; (2 implicitação de Garantias e, especialmente, Apoios; e (3 construção de cadeias complexas de esquemas argumentativos.

Consciência da "estrutura argumentativa" e produção textual

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Regina Pinheiro

Full Text Available A suposição cognitivista de que a consciência de um "esquema argumentativo" oriente as produções textuais dos indivíduos está longe de ser pacífica. Alternativamente, sugere-se que os elementos incluídos num texto seriam determinados pela consciência a respeito de parâmetros da situação de produção textual (finalidade, destinatário, etc.. Partindo-se desta controvérsia, investigou-se em que medida a reflexão sobre a "estrutura argumentativa" exerceria um impacto sobre os elementos que crianças e adultos jovens incorporariam a seus textos. A análise dos resultados mostrou que: ponto de vista e justificativa foram os elementos considerados indispensáveis a uma escrita argumentativa. Antecipação de contra-argumentos foi vista como relevante para a consecução do objetivo persuasivo do texto apenas quando eram rebatidos. A reflexão sobre elementos da "estrutura argumentativa" nem sempre correspondeu à inclusão destes nos textos produzidos. Tal inclusão dependeu primordialmente da avaliação dos elementos que mais contribuiriam para a consecução da finalidade persuasiva do texto - consciência retórica.

PHYSICAL, PHYSICOCHEMICAL AND TAXONOMIC CHARACTERIZATION OF PSIDIUM ARAÇA RADDI

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Maria do Rosário Fátima Padilha

2016-10-01

Full Text Available New research has stimulated a large reevaluation of species with regards to the use of fruits from native plants. Araçá (a small Brazilian guava-like fruit is found scattered in the wild in Pernambuco/Brazil. There is a scarcity of detailed studies on such regional fruit trees, especially the Psidium araçá Raddi species, whereas there is an enormous possibility to explore the potential offered by these fruits, such as in the field of gastronomy, where the search for new ingredients and exotic flavors associated with functional properties has been increasing. This article aimed to evaluate the physical, physicochemical and taxonomic characterization of araçá obtained from different agricultural regions of Pernambuco in order to investigate the possibility of developing new products from this native fruit. The taxonomic identification confirmed that all collected material belonged to the species P. araçá Raddi. An average weight of 7.45 g/fruit was observed. With respect to pH, values between 3.17 and 3.48 were found, and the acidity as a percentage of citric acid was on the order of 0.96% to 0.99%. It was shown that the P. araçá Raddi fruit has a desirable quality for the food industry, presenting excellent conditions for the development of formulations of high commercial value and promising application in the national gastronomy.

Taxonomic assessment of seaweed community from the coastal areas of Bintulu, Sarawak, Malaysia

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Mohd Hafizbillah Zawawi

2015-04-01

Full Text Available Basic taxonomic information forms the important basis for the documentation, resource management and utilization of marine biodiversity such as seaweeds. A taxonomic assessment of seaweeds in the coastal areas of Bintulu, Sarawak, East Malaysia, was conducted monthly from May 2011 to May 2012. Species composition was recorded following NaGISA protocols, direct observation, and SCUBA and snorkeling techniques. A total of 54 species were identified, classified into Rhodophyta (23 species, Chlorophyta (16 species and Phaeophyta (15 species. The highest abundance was recorded at Kuala Similajau (25 species while the lowest was recorded at Kuala Nyalau (12 species. As the present study was conducted by examining species collected from both rocky shores and the reef area for the first time, a higher number of species was documented compared to previous studies conducted in the same general area but focusing only on particular habitats. Thirty species found in the current survey represent new records for the locality including some with economic potentials.

An edit script for taxonomic classifications

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Valiente Gabriel

2005-08-01

Full Text Available Abstract Background The NCBI taxonomy provides one of the most powerful ways to navigate sequence data bases but currently users are forced to formulate queries according to a single taxonomic classification. Given that there is not universal agreement on the classification of organisms, providing a single classification places constraints on the questions biologists can ask. However, maintaining multiple classifications is burdensome in the face of a constantly growing NCBI classification. Results In this paper, we present a solution to the problem of generating modifications of the NCBI taxonomy, based on the computation of an edit script that summarises the differences between two classification trees. Our algorithms find the shortest possible edit script based on the identification of all shared subtrees, and only take time quasi linear in the size of the trees because classification trees have unique node labels. Conclusion These algorithms have been recently implemented, and the software is freely available for download from http://darwin.zoology.gla.ac.uk/~rpage/forest/.

Developmental Antecedents of Taxonomic and Thematic Strategies at 3 Years of Age.

Science.gov (United States)

Dunham, Philip; Dunham, Frances

1995-01-01

Individual differences in children's conceptual strategies at 3 years of age were predicted by aspects of children's behavior and language at 13 and 24 months. Production of pointing gestures at 13 months and nouns and attributive adjectives at 24 months were positively associated with the use of a taxonomic matching strategy at 3 years of age.…

Taxonomic and functional distinctness of the fish assemblages in three coastal environments (bays, coastal lagoons and oceanic beaches) in Southeastern Brazil.

Science.gov (United States)

Azevedo, Márcia Cristina Costa; Gomes-Gonçalves, Rafaela de Sousa; Mattos, Tailan Moretti; Uehara, Wagner; Guedes, Gustavo Henrique Soares; Araújo, Francisco Gerson

2017-08-01

Several species of marine fish use different coastal systems especially during their early development. However, these habitats are jeopardized by anthropogenic influences threatening the success of fish populations, and urgent measures are needed to priorize areas to protect their sustainability. We applied taxonomic (Δ+) and functional (X+) distinctiveness indices that represent taxonomic composition and functional roles to assess biodiversity of three different costal systems: bays, coastal lagoons and oceanic beaches. We hypothesized that difference in habitat characteristics, especially in the more dynamism and habitat homogeneity of oceanic beaches compared with more habitat diversity and sheltered conditions of bays and coastal lagoons results in differences in fish richness and taxonomic and functional diversity. The main premise is that communities phylogenetically and functionally more distinct have more interest in conservation policies. Significant differences (P PERMANOVA. Fish richness was higher in bays compared with the coastal lagoons and oceanic beaches. Higher Δ+ was found for the coastal lagoons compared with the bays and oceanic beaches, with the bays having some values below the confidence limit. Similar patterns were found for X+, although all values were within the confidence limits for the bays, suggesting that the absence of some taxa does not interfere in functional diversity. The hypothesis that taxonomic and functional structure of fish assemblages differ among the three systems was accepted and we suggest that coastal lagoons should be priorized in conservation programs because they support more taxonomic and functional distinctiveness. Copyright © 2017 Elsevier Ltd. All rights reserved.

A prescrição da produção textual do aluno: orientação para o trabalho de aluno ou restrição do seu agir?

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Luzia Bueno

2011-07-01

Full Text Available Este artigo visa discutir a importância de se olhar a prescrição da produção textual do aluno para se compreender melhor os textos produzidos na situação acadêmica. Para isso, retomamos os resultados de análise de um documento prescritivo e dos projetos de estágio feitos por estudantes do curso de Letras. Para a análise e reflexão sobre os resultados, adota a perspectiva teórica do Interacionismo Sociodiscursivo e de Ciências do Trabalho – Ergonomia da Atividade e Clínica da Atividade, particularmente, assim como as pesquisas do grupo ALTER-LAEL.Palavras-chave: Prescrição. Produção textual. Trabalho de aluno. Formação de professores. Interacionismo Sociodiscursivo.

Taxonomic changes in Oenothera sections Gaura and Calylophus (Onagraceae)

OpenAIRE

Wagner,Warren; Krakos,Kyra; Hoch,Peter C.

2013-01-01

Abstract The long-recognized genus Gaura was shown recently to be deeply nested within one of two major clades of Oenothera. New molecular data indicate further taxonomic changes are necessary in Oenothera sect. Gaura. We make these changes here, including three new combinations, in advance of the Onagraceae treatment for the Flora of North America. The new phylogenetic studies show that several pairs of taxa treated as subspecies in the most recent revision by Raven and Gregory (1972) had in...

Contributions of the textual analysis of speeches for the teaching in the virtual enviroments

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Sueli Cristina Marquesi

2013-12-01

Full Text Available The present paper aims at discussing theoretical aspects of Textual Analysis of Speeches which guide an autonomous learning methodology for university students. Having as a theoretical ground, mainly, the studies developed by Adam (2008, a thematic unit of theoretical content in the area of Exact Sciences will be discussed. Within this unit, explicative and descriptive sequences are constructed in such a way to promote the interaction between the text, presented in a virtual environment, and the student. Consequently, the new content of learning is facilitated. For doing so, activities – presented totally at distance - prepared for engineering students of a Brazilian university will be brought to discussion. The methodology establishes a dialogue between an issue that is central in dealing with learning in virtual environments – the interaction through language – and the role the student has to assume in these environments: a reader/ author who makes meaning and transfers knowledge.

Caloplaca subpallida (Teloschistaceae, a lichen species new to Poland: distribution, ecology and taxonomic affinities

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Katarzyna Szczepańska

2013-03-01

Full Text Available Caloplaca subpallida is reported from basic and altered ultrabasic rocks (i.e. basalt, greenstone, and serpentinite at nine sites in SW Poland. A detailed description of the species and a discussion on its taxonomic affinities are provided.

Taxonomic relationships of some species of orobanche l. evidence from rapd-pcr and issr markers

International Nuclear Information System (INIS)

Sharawy, S.; Karakish, E.

2015-01-01

The taxonomic relationships among 25 samples representing nine species of Orobanche L. (Orobanchaceae) were determined by the analysis of morphological characters and molecular polymorphism using random amplified polymorphic DNA (RAPD) and inter simple sequence repeat (ISSR). In order to construct dendrogram elucidating the relationships among the examined taxa, the coded data were analyzed using the software package NTSYS-pc 2.1 based on the Neighbor-joining (NJ) tree building method based on a distance matrix. The aim of this study is to develop taxonomic relationship based on morphological and molecular data, in order to obtain a more reliable taxonomic relationship of Orobanche species under study. The dendrogram produced by the analysis of the molecular data (RAPD and ISSR) resembled that constructed by NJ dendrogram for the morphological variation. The studied taxa were separated in two groups, the first comprised of the five species of section Trionychon (O. purpurea, O.lavandulacea, O. ramosa, O. mutelii and O. aegyptiaca) and the second comprised of the four species of section Orobanche (O.cernua, O. crenata, O. minor and O. pubescens). High similarity was detected between O. pubescens and O. minor. The results confirmed the close relationship between O. ramosa and O. mutelii. Moreover, this study demonstrated the grouping of the studied taxa in most cases by geographically isolated population. (author)

Risk analysis in radiation treatment: Application of a new taxonomic structure

International Nuclear Information System (INIS)

Ekaette, Edidiong U.; Lee, Robert C.; Cooke, David L.; Kelly, Karie-Lynn; Dunscombe, Peter B.

2006-01-01

Background and purpose: Radiation treatment (RT) for cancer is susceptible to clinical incidents resulting from human errors and equipment failures. A systematic approach to collecting and processing incidents is required to manage patient risks. We describe the application of a new taxonomic structure for RT that supports risk analysis and organizational learning. Materials and methods: A systematic analysis of the RT process identified five process domains. Within each domain we defined incident type groups. We then constructed a database reflecting this taxonomic structure and populated it with incidents from publicly available sources. Querying this database provides insights into the nature and relative frequency of incidents in RT. Results: There are relatively few reports of incidents in the Prescription domain compared with the Preparation and Treatment domains. There are also fewer reports of systematic and infrastructure incidents in comparison to sporadic and process incidents. Infrastructure incidents are mainly systematic in nature, while process incidents are more likely to be sporadic. Conclusions: The lack of a standard, systems-oriented framework for incident reporting makes it difficult to learn from existing incident report sources. A clear understanding of the potential consequences and relationships between different incident types will guide incident reporting, resource allocation, and risk management efforts

Evidence from Animal Models: Is a Restricted or Conventional Intestinal Microbiota Composition Predisposing to Risk for High-LET Radiation Injury?

Science.gov (United States)

Maier, Irene; Schiestl, Robert H

2015-06-01

specifically increased anti-neoplastic cytolytic memory CD8(+) T cells by low taxonomic diversity and 3. DNA damage repair efficiency induced by a model of conventional microbiota most likely initiates an adaptive response to radiation through microbiota-induced intestinal sub-symptomatic inflammation.

Bamboo tea: reduction of taxonomic complexity and application of DNA diagnostics based on rbcL and matK sequence data

Science.gov (United States)

Häser, Annette

2016-01-01

Background Names used in ingredient lists of food products are trivial and in their nature rarely precise. The most recent scientific interpretation of the term bamboo (Bambusoideae, Poaceae) comprises over 1,600 distinct species. In the European Union only few of these exotic species are well known sources for food ingredients (i.e., bamboo sprouts) and are thus not considered novel foods, which would require safety assessments before marketing of corresponding products. In contrast, the use of bamboo leaves and their taxonomic origin is mostly unclear. However, products containing bamboo leaves are currently marketed. Methods We analysed bamboo species and tea products containing bamboo leaves using anatomical leaf characters and DNA sequence data. To reduce taxonomic complexity associated with the term bamboo, we used a phylogenetic framework to trace the origin of DNA from commercially available bamboo leaves within the bambusoid subfamily. For authentication purposes, we introduced a simple PCR based test distinguishing genuine bamboo from other leaf components and assessed the diagnostic potential of rbcL and matK to resolve taxonomic entities within the bamboo subfamily and tribes. Results Based on anatomical and DNA data we were able to trace the taxonomic origin of bamboo leaves used in products to the genera Phyllostachys and Pseudosasa from the temperate “woody” bamboo tribe (Arundinarieae). Currently available rbcL and matK sequence data allow the character based diagnosis of 80% of represented bamboo genera. We detected adulteration by carnation in four of eight tea products and, after adapting our objectives, could trace the taxonomic origin of the adulterant to Dianthus chinensis (Caryophyllaceae), a well known traditional Chinese medicine with counter indications for pregnant women. PMID:27957401

Non-native vascular plants from Canary Islands (Spain): nomenclatural and taxonomical adjustments

OpenAIRE

Verloove, F.

2013-01-01

Se propone correcciones taxonómicas y nomenclaturales respecto a 88 taxones no nativos de la lista de plantas vasculares de las Islas Canarias (España). Non-native vascular plants from Canary Islands (Spain): nomenclatural and taxonomical adjustments. Corrections and other adjustments are proposed for 88 non-native taxa from the checklist of vascular plants from the Canary Islands (Spain).

Taxonomic etymology – in search of inspiration

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Piotr Jozwiak

2015-07-01

Full Text Available We present a review of the etymology of zoological taxonomic names with emphasis on the most unusual examples. The names were divided into several categories, starting from the most common – given after morphological features – through inspiration from mythology, legends, and classic literature but also from fictional and nonfictional pop-culture characters (e.g., music, movies or cartoons, science, and politics. A separate category includes zoological names created using word-play and figures of speech such as tautonyms, acronyms, anagrams, and palindromes. Our intention was to give an overview of possibilities of how and where taxonomists can find the inspirations that will be consistent with the ICZN rules and generate more detail afterthought about the naming process itself, the meaningful character of naming, as well as the recognition and understanding of names.

Los viajes y trabajos de Manuel Iradier en África: género e hibridismo textual en el relato de viajes en el siglo XIX

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Llosa Sanz, Álvaro

2005-12-01

Full Text Available The present article analyzes and locates the book of trips of century XIX like a crossroad of the most varied genre. For reaching this purpose, the travel book titled África. Viajes y trabajos de la Asociación Eúskara La Exploradora, written and published in two volumes by Manuel Iradier in 1887, has been chosen. Through this collection of texts the reader discovers —almost encyclopedically— an amazing world which is shown through the mixed use of different textual genres.El presente artículo analiza y sitúa el libro de viajes del siglo XIX como encrucijada de los más variados géneros. Para ello, se ha escogido el texto África. Viajes y trabajos de la Asociación Eúskara La Exploradora, escrito por Manuel Iradier en 1887 y publicado en dos volúmenes. A través de sus textos el lector va descubriendo casi enciclopédicamente un mundo que se le muestra a través del uso variadísimo de diferentes géneros textuales que se entremezclan y conforman el libro de viajes.

Taxonomic value of stem anatomical characters in classification of some Adonis (Ranunculaceae species in Iran

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Majid Ghorbani Nohooji

2011-06-01

(A. aestivalis, A. flammea and A. dentata were evaluated using numerical taxonomic methods. Obtained results demonstrated that simultaneous application of both qualitative and relative characters offers a better chance in species delimitation in future researches.

The Identification, Types, Taxonomic Orders, Biodiversity and Importance of Aquatic Insects

OpenAIRE

J.F.N. Abowei; B.R. Ukoroije

2012-01-01

The identification, types, taxonomic orders, biodiversity and importance of aquatic insects was reviewed to facilitate sustainable culture fisheries management and practice. Aquatic insects contribute significantly to fresh water ecosystems, one of many groups of organisms that, together, must be considered in the study of aquatic ecology. As such their study may be a significant part of understanding the ecological state of a given ecosystem and in gauging how that ecosystem will respond to ...

Taxonomic status and paleoecology of Rusingoryx atopocranion (Mammalia, Artiodactyla), an extinct Pleistocene bovid from Rusinga Island, Kenya

Science.gov (United States)

Faith, J. Tyler; Choiniere, Jonah N.; Tryon, Christian A.; Peppe, Daniel J.; Fox, David L.

2011-05-01

Rusingoryx atopocranion is a poorly known extinct alcelaphine bovid, documented in Pleistocene deposits associated with Middle Stone Age artifacts on Rusinga Island, Kenya. Following its initial description, Rusingoryx was subsumed into Megalotragus, which includes the extinct giant wildebeests, on the basis of its cranial architecture. Renewed investigations of the Pleistocene deposits on Rusinga Island recovered a large sample of Rusingoryx specimens that provide new taxonomic and paleoecological insight. This study (1) reviews the morphological and phylogenetic evidence concerning the taxonomic status of Rusingoryx and (2) evaluates its paleoecology and dietary habits . The morphology and phylogenetic data indicate that Rusingoryx is distinct from Megalotragus; they likely shared a common ancestor in the late Pliocene. Ecomorphology and mesowear analysis point to a specialized grazing adaptation, and its association with arid-adapted ungulates suggests a preference for arid grasslands. The confirmation of Rusingoryx as a valid taxonomic entity, together with the presence of other extinct taxa (including Megalotragus) on Rusinga Island, suggests an increasingly complex pattern of ungulate biogeography and extinctions in the late Quaternary of East Africa. Rusingoryx appears to have been part of an arid-adapted faunal community that potentially persisted in East Africa until the onset of the Holocene.

Integration of relational and textual biomedical sources. A pilot experiment using a semi-automated method for logical schema acquisition.

Science.gov (United States)

García-Remesal, M; Maojo, V; Billhardt, H; Crespo, J

2010-01-01

Bringing together structured and text-based sources is an exciting challenge for biomedical informaticians, since most relevant biomedical sources belong to one of these categories. In this paper we evaluate the feasibility of integrating relational and text-based biomedical sources using: i) an original logical schema acquisition method for textual databases developed by the authors, and ii) OntoFusion, a system originally designed by the authors for the integration of relational sources. We conducted an integration experiment involving a test set of seven differently structured sources covering the domain of genetic diseases. We used our logical schema acquisition method to generate schemas for all textual sources. The sources were integrated using the methods and tools provided by OntoFusion. The integration was validated using a test set of 500 queries. A panel of experts answered a questionnaire to evaluate i) the quality of the extracted schemas, ii) the query processing performance of the integrated set of sources, and iii) the relevance of the retrieved results. The results of the survey show that our method extracts coherent and representative logical schemas. Experts' feedback on the performance of the integrated system and the relevance of the retrieved results was also positive. Regarding the validation of the integration, the system successfully provided correct results for all queries in the test set. The results of the experiment suggest that text-based sources including a logical schema can be regarded as equivalent to structured databases. Using our method, previous research and existing tools designed for the integration of structured databases can be reused - possibly subject to minor modifications - to integrate differently structured sources.

Taxonomic revision and phylogenetic analyses of rubber powdery mildew fungi.

Science.gov (United States)

Liyanage, K K; Khan, Sehroon; Brooks, Siraprapa; Mortimer, Peter E; Karunarathna, Samantha C; Xu, Jianchu; Hyde, Kevin D

2017-04-01

Powdery mildew is a fungal disease that infects a wide range of plants, including rubber trees, which results in a reduction of latex yields of up to 45%. The causal agent of powdery mildew of rubber was first described as Oidium heveae, but later morpho-molecular research suggested that in the past, O. heveae has been confused with Erysiphe quercicola. However, it is still under debate whether the causal agent should be classified as a species of the genus Erysiphe emend. or Golovinomyces and Podosphaera, respectively. Therefore, the aim of this study was to undertake the morpho-molecular characterization of powdery mildew species associated with rubber trees, thus resolving these taxonomic issues. Morphological observation under light and scanning electron microscopes (SEM) clearly identified two morphotypes of the rubber powdery mildew. With the support of morphological and phylogenetic data, one of the two morphotypes was identified as the asexual morph of E. quercicola, while the second morphotype is still insufficiently known and according to the morphological results obtained we assume that it might belong to the genus Golovinomyces. More collections and additional molecular data are required for final conclusions regarding the exact taxonomic position of the second morphotype of rubber powdery mildew and its relation to the name O. heveae. The haplotype analysis identified eight haplotype groups of E. quercicola indicating the high genetic diversity of the species. Copyright © 2017 Elsevier Ltd. All rights reserved.

Cultural Artifacts as Scaffolds for Genre Development.

Science.gov (United States)

Kamberelis, George; Bovino, Thomas D.

1999-01-01

Shows that children in the primary grades possessed considerable working knowledge of the cultural conventions of narrative genres but much less working knowledge of the cultural conventions of informational genres. Reveals grade-related developmental differences for some dimensions of linguistic and textual organization. Shows that cultural…

Asian longhorned beetle complicates the relationship between taxonomic diversity and pest vulnerability in street tree assemblages

Data.gov (United States)

U.S. Environmental Protection Agency — Urban foresters routinely emphasise the importance of taxonomic diversity to reduce the vulnerability of tree assemblages to invasive pests, but it is unclear to...

Taxonomic revision of Asian genus Glyptopetalum Thwaites (Celastraceae R. Br.

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Ivan A. Savinov

2014-12-01

Full Text Available Taxonomic survey of Asian genus Glyptopetalum Thwaites (Celastraceae R. Br. is presented. Thirty five species taxa of Glyptopetalum are accepted, including one new species, G.  vidalii I. Savinov (Laos, Thailand, a new record for China, G. tonkinense Pitard (SE Yunnan and a new record for Cambodia,               G. quadrangulare Prain ex King, a new record for Indonesia – G. euonymoides Merr. and a new record for Philippines, Mindanao island – G. loheri Merr. 

Taxonomía de los modelos y metodologías de desarrollo de software más utilizados

OpenAIRE

J. Cervantes Ojeda; María del Carmen Gómez Fuentes

2012-01-01

A través de una recopilación y análisis de los principales modelos de desarrollo de software existentes, proponemos una taxonomía que los integra con el fin de facilitar la e lección de un modelo apropiado para cada proyecto en particular. Una buena elección de modelo (correctamente aplicado) ahorra tiempo y mejora la calidad de los sistemas que se producen. Sin embargo, la amplia variedad de modelos y metodologías en el mundo del desarrollo de software, dificulta esta elección. La taxonomía ...

15 CFR 742.18 - Chemical Weapons Convention (CWC or Convention).

Science.gov (United States)

2010-01-01

... 15 Commerce and Foreign Trade 2 2010-01-01 2010-01-01 false Chemical Weapons Convention (CWC or... REGULATIONS CONTROL POLICY-CCL BASED CONTROLS § 742.18 Chemical Weapons Convention (CWC or Convention). States... Use of Chemical Weapons and on Their Destruction, also known as the Chemical Weapons Convention (CWC...

Cremastosperma (and other evolutionary digressions) : Molecular phylogenetic, biogeographic, and taxonomic studies in Neotropical Annonaceae

NARCIS (Netherlands)

Pirie, Michael David

2005-01-01

Results are presented of research on a family of flowering plants, the Annonaceae, species of which are found in tropical rainforest across the world. The project focussed on one group of species, the genus Cremastosperma, which is found in the South and Central American tropics. A taxonomic

Environmental Scanning Electron Microscopy as a Useful Tool for Taxonomical Documentation of Parasitical Helminths

Czech Academy of Sciences Publication Activity Database

Tihlaříková, Eva; Neděla, Vilém; Mašová, Š.

2016-01-01

Roč. 22, S3 (2016), s. 1178-1179 ISSN 1431-9276 R&D Projects: GA ČR(CZ) GA14-22777S Institutional support: RVO:68081731 Keywords : parasitical Helminths * ESEM * taxonomical documentation Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering Impact factor: 1.891, year: 2016

Polar solar panels: Arctic and Antarctic microbiomes display similar taxonomic profiles.

Science.gov (United States)

Tanner, Kristie; Martí, Jose Manuel; Belliure, Josabel; Fernández-Méndez, Mar; Molina-Menor, Esther; Peretó, Juli; Porcar, Manuel

2018-02-01

Solar panels located on high (Arctic and Antarctic) latitudes combine the harshness of the climate with that of the solar exposure. We report here that these polar solar panels are inhabited by similar microbial communities in taxonomic terms, dominated by Hymenobacter spp., Sphingomonas spp. and Ascomycota. Our results suggest that solar panels, even on high latitudes, can shape a microbial ecosystem adapted to irradiation and desiccation. © 2017 Society for Applied Microbiology and John Wiley & Sons Ltd.

Comparison of Conventional and Semi-Conventional Management ...

African Journals Online (AJOL)

Comparison of Conventional and Semi-Conventional Management Systems on the Performance and Carcass Yield of Broiler Chickens. ... TO AFRICAN RESEARCH. AFRICAN JOURNALS ONLINE (AJOL) · Journals · Advanced Search · USING AJOL · RESOURCES ... Journal Home > Vol 20, No 1 (2018) >. Log in or ...

A Taxonomic Note on the Misidentification of Anemone tschernjaewii Regel. in Kashmir Himalaya

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Aijaz Hassan Ganie

2015-03-01

Full Text Available The correct identification of Anemone tschernjaewii Regel. previously misidentified as A. biflora DC. in the Kashmir Himalaya, India is reported. In this brief report, a detailed taxonomic description and photo-plates of its diagnostic morphological and anatomical characters are provided to validate this plant record for the region and to facilitate its easier field identification.

A taxonomic framework for cable bacteria and proposal of the candidate genera Electrothrix and Electronema

DEFF Research Database (Denmark)

Trojan, Daniela; Schreiber, Lars; Bjerg, Jesper Tataru

2016-01-01

Cable bacteria are long, multicellular filaments that can conduct electric currents over centimeter-scale distances. All cable bacteria identified to date belong to the deltaproteobacterial family Desulfobulbaceae and have not been isolated in pure culture yet. Their taxonomic delineation and exa...

Frost tolerance in wild potatoes : Assessing the predictivity of taxonomic, geographic and ecological factors

NARCIS (Netherlands)

Hijmans, R.J.; Jacobs, M.; Bamberg, J.B.; Spooner, D.M.

2003-01-01

The use of genetic resources could be more effective and efficient if we were able to predict the presence or absence of useful traits in different populations or accessions. We analyzed the extent to which taxonomic, geographic and ecological factors can predict the presence of frost tolerance in

Preparing for opening night: temporal boundary objects in textually-mediated professional practice

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Elisabeth Davies

2004-01-01

Full Text Available The authors report on two projects in which the role of documents as temporal boundary objects mediating information practices across multiple timelines was explored. It has been suggested that studying workplace documents will uncover the information practices of professionals beyond traditional information needs and uses studies. Two workplaces were studied: a professional theatre production and a midwifery clinic. Both settings are communities constructed partly through textual dynamics and both have a pre-production phase leading to an opening night. In the theatre setting, qualitative interviews with the cast and crew and document analysis of the prompt book were the means of data collection. The midwifery clinic setting was investigated by means of interviews and follow-ups with sixteen midwife-client pairs and document analysis of the antenatal record. Preliminary thematic analysis pertaining to time and information was conducted on interview transcripts and the relevant documents. It was possible to show several instances of both the prompt book and the antenatal record being treated as a timeline by the various professionals using them. The authors conclude with a discussion of the temporal aspects of professionals' information practices as revealed by these two projects and encourage further document-focused research.

Temporal changes in taxonomic and functional diversity of fish assemblages downstream from mountaintop mining

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Hitt, Nathaniel P.; Chambers, Douglas B.

2014-01-01

Mountaintop mining (MTM) affects chemical, physical, and hydrological properties of receiving streams, but the long-term consequences for fish-assemblage structure and function are poorly understood. We sampled stream fish assemblages using electrofishing techniques in MTM exposure sites and reference sites within the Guyandotte River basin, USA, during 2010–2011. We calculated indices of taxonomic diversity (species richness, abundance, Shannon diversity) and functional diversity (functional richness, functional evenness, functional divergence) to compare exposure and reference assemblages between seasons (spring and autumn) and across years (1999–2011). We based temporal comparisons on 2 sites that were sampled during 1999–2001 by Stauffer and Ferreri (2002). Exposure assemblages had lower taxonomic and functional diversity than reference assemblages or simulated assemblages that accounted for random variation. Differences in taxonomic composition between reference and exposure assemblages were associated with conductivity and aqueous Se concentrations. Exposure assemblages had fewer species, lower abundances, and less biomass than reference assemblages across years and seasons. Green Sunfish (Lepomis cyanellus) and Creek Chub (Semotilus atromaculatus) became numerically dominant in exposure assemblages over time because of their persistence and losses of other taxa. In contrast, species richness increased over time in reference assemblages, a result that may indicate recovery from drought. Mean individual biomass increased as fish density decreased and most obligate invertivores were apparently extirpated at MTM exposure sites. Effects of MTM were not related to physical-habitat conditions but were associated with water-quality variables, which may limit quality and availability of benthic macroinvertebrate prey. Simulations revealed effects of MTM that could not be attributed to random variation in fish assemblage structure.

Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes

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Cronn Richard

2009-12-01

Full Text Available Abstract Background Molecular evolutionary studies share the common goal of elucidating historical relationships, and the common challenge of adequately sampling taxa and characters. Particularly at low taxonomic levels, recent divergence, rapid radiations, and conservative genome evolution yield limited sequence variation, and dense taxon sampling is often desirable. Recent advances in massively parallel sequencing make it possible to rapidly obtain large amounts of sequence data, and multiplexing makes extensive sampling of megabase sequences feasible. Is it possible to efficiently apply massively parallel sequencing to increase phylogenetic resolution at low taxonomic levels? Results We reconstruct the infrageneric phylogeny of Pinus from 37 nearly-complete chloroplast genomes (average 109 kilobases each of an approximately 120 kilobase genome generated using multiplexed massively parallel sequencing. 30/33 ingroup nodes resolved with ≥ 95% bootstrap support; this is a substantial improvement relative to prior studies, and shows massively parallel sequencing-based strategies can produce sufficient high quality sequence to reach support levels originally proposed for the phylogenetic bootstrap. Resampling simulations show that at least the entire plastome is necessary to fully resolve Pinus, particularly in rapidly radiating clades. Meta-analysis of 99 published infrageneric phylogenies shows that whole plastome analysis should provide similar gains across a range of plant genera. A disproportionate amount of phylogenetic information resides in two loci (ycf1, ycf2, highlighting their unusual evolutionary properties. Conclusion Plastome sequencing is now an efficient option for increasing phylogenetic resolution at lower taxonomic levels in plant phylogenetic and population genetic analyses. With continuing improvements in sequencing capacity, the strategies herein should revolutionize efforts requiring dense taxon and character sampling

Taxonomic and numerical sufficiency in a Lower and Middle Miocene molluscan metacommunity of the Central Paratethys

Science.gov (United States)

Zuschin, Martin; Nawrot, Rafal; Harzhauser, Mathias; Mandic, Oleg

2015-04-01

Among the most important questions in quantitative palaeoecology is how taxonomic and numerical resolution affect the analysis of community and metacommunity patterns. A species-abundance data set (10 localities, 213 bulk samples, 478 species, > 49,000 shells) from Burdigalian, Langhian and Serravallian benthic marine molluscan assemblages of the Central Paratethys was studied for this purpose. Assemblages are from two nearshore habitats (estuarine and marine intertidal) and three subtidal habitats (estuarine, fully marine sandy, and fully marine pelitic), which represent four biozones and four 3rd order depositional sequences over more than three million years, and are developed along the same depth-related environmental gradient. Double-standardized data subsampled to 19 samples per habitat, each with a minimum of 50 specimens, were used to calculate R²-values from PERMANOVA as a measure of differences between habitats at three taxonomic levels (species, genera and families) and at five levels of data transformation (raw abundances, percentages, square-root transformed percentages, fourth-root transformed percentages, presence-absence data). Species discriminate better between habitats than genera and families, but the differences between taxonomic levels are much stronger in the subtidal, where genera and families have more species than than in the intertidal. When all habitats are compared percentages and square-root transformed percentages discriminate equally well and perform better than higher levels of data transformation. Among nearshore and among subtidal habitats, however, the ability to discriminate between habitats increases with the level of data transformation (i.e., it is best for fourth-root transformed percentages and presence-absence data). The impact of decreasing taxonomic resolution is of minor importance in nearshore habitats, which are characterized by similar assemblages showing strong dominance of few widely distributed species, and many

Taxonomic, biogeographic, and taphonomic reassessment of a large extinct species of paca from the Quaternary of Brazil

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Elver Luiz Mayer

2016-12-01

Full Text Available The taxonomy of extinct species of Cuniculus (Caviomorpha, Rodentia, Mammalia is confusing and poorly studied. Here we provide a taxonomic review of extinct cuniculids, and discuss the taxonomic, biogeographic, taphonomic and chronologic aspects of new remains of an extinct large cuniculid from Brazilian Quaternary Gruta Cuvieri cave deposits. Our taxonomic review suggests that Cuniculus rugiceps (Lund, 1837 is the valid taxon to include all available occurrences of extinct cuniculids. The most evident features of this taxon are its larger size and the stronger and more densely distributed rugosities on the skull external surface when compared to the extant species. At present, the distribution of C. rugiceps is restricted to the tropical region of Brazil. Regarding the new remains, taphonomic analysis of the specimens from Cuvieri Cave suggests our sample is represented by at least seven individuals that accumulated within the cave deposit by pitfall entrapment. The biostratinomy of the specimens was characterized by prolonged surface exposure inside the pit with fragmentation and displacement caused mostly by falling and subsequent trampling by individuals of the same and/or other species. The stratigraphically controlled excavations and chronological data allowed the establishment of a Late Pleistocene minimum age for these specimens.

A taxonomic revision of Maurocenia (Celastraceae, a Western Cape monotypic endemic

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R. H. Archer

1998-10-01

Full Text Available A taxonomic account is given of the monotypic genus Maurocenia Mill. Maurocenia frangula Mill, has a restricted range and is endemic to the Cape Peninsula and the West Coast National Park. Western Cape. Maurocenia frangularia (L.Mill., the species name and author citation widely used in the past, is incorrect. It is characterized by. among others, pendulous ovules and gynodioecy, rare states in the Celastraceae. Maurocenia is apparently most closely related to the southern African genus Lauridia Eckl. & Zeyh.

Extrafloral nectaries in Combretaceae: morphology, anatomy and taxonomic significance

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P. M. Tilney

2004-09-01

Full Text Available Extrafloral nectaries (EFNs in members of the Combretaceae are nectaries not involved with pollination and occurring on vegetative structures; they are believed to attract ants to protect plants against herbivorv by other insects. In the Combretaceae EFNs are reported in species of Terminalia L. and Pteleopsis Engl., putative EFNs in Meiostemon Exell & Stace and Quisqualis L., and an absence of EFNs in Combretum Loefl. and Lumnitzera Willd. EFNs in the family are generally spherical in shape and may be raised, level with the surface or somewhat concave. They are similar in the Terminalia and  Pteleopsis species where they display varying degrees of internal zonation and are composed of small cells; those species observed in the field were all found to have functional EFNs. In Meiostemon tetrandrum (Exell Exell & Stace, Quisqualis indica L.. Q. littorea (Engl. Exell and Q. paviflora Gerrard ex Sond.. apparent EFNs lack internal zonation and are composed of enlarged cells; confirmation is required as to whether these are functional . The formation of EFNs appears to be highly flexible. They are usually essentially associated with new growth but their occurrence is sporadic and they do not appear on every leaf or every' branch of a plant. The distribution of EFNs on leaves, when present, is of taxonomic significance to separate species of Pteleopsis and Terminalia: otherwise the presence or absence and distribution of EFNs are too variable and sporadic in occurrence to be of taxonomic significance at the species level. Indiscriminate use of the terms gland and domatium instead of EFN. and possible confusion with damage caused by other organisms, has probably con­tributed to many of these structures not previously being recorded as EFNs. Floral and extrafloral nectar samples of T. phanerophlebia Engl. & Diels differed in sugar composition.

AST: an automated sequence-sampling method for improving the taxonomic diversity of gene phylogenetic trees.

Science.gov (United States)

Zhou, Chan; Mao, Fenglou; Yin, Yanbin; Huang, Jinling; Gogarten, Johann Peter; Xu, Ying

2014-01-01

A challenge in phylogenetic inference of gene trees is how to properly sample a large pool of homologous sequences to derive a good representative subset of sequences. Such a need arises in various applications, e.g. when (1) accuracy-oriented phylogenetic reconstruction methods may not be able to deal with a large pool of sequences due to their high demand in computing resources; (2) applications analyzing a collection of gene trees may prefer to use trees with fewer operational taxonomic units (OTUs), for instance for the detection of horizontal gene transfer events by identifying phylogenetic conflicts; and (3) the pool of available sequences is biased towards extensively studied species. In the past, the creation of subsamples often relied on manual selection. Here we present an Automated sequence-Sampling method for improving the Taxonomic diversity of gene phylogenetic trees, AST, to obtain representative sequences that maximize the taxonomic diversity of the sampled sequences. To demonstrate the effectiveness of AST, we have tested it to solve four problems, namely, inference of the evolutionary histories of the small ribosomal subunit protein S5 of E. coli, 16 S ribosomal RNAs and glycosyl-transferase gene family 8, and a study of ancient horizontal gene transfers from bacteria to plants. Our results show that the resolution of our computational results is almost as good as that of manual inference by domain experts, hence making the tool generally useful to phylogenetic studies by non-phylogeny specialists. The program is available at http://csbl.bmb.uga.edu/~zhouchan/AST.php.

Taxonomic resolutions based on 18S rRNA genes: a case study of subclass copepoda.

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Shu Wu

Full Text Available Biodiversity studies are commonly conducted using 18S rRNA genes. In this study, we compared the inter-species divergence of variable regions (V1-9 within the copepod 18S rRNA gene, and tested their taxonomic resolutions at different taxonomic levels. Our results indicate that the 18S rRNA gene is a good molecular marker for the study of copepod biodiversity, and our conclusions are as follows: 1 18S rRNA genes are highly conserved intra-species (intra-species similarities are close to 100%; and could aid in species-level analyses, but with some limitations; 2 nearly-whole-length sequences and some partial regions (around V2, V4, and V9 of the 18S rRNA gene can be used to discriminate between samples at both the family and order levels (with a success rate of about 80%; 3 compared with other regions, V9 has a higher resolution at the genus level (with an identification success rate of about 80%; and 4 V7 is most divergent in length, and would be a good candidate marker for the phylogenetic study of Acartia species. This study also evaluated the correlation between similarity thresholds and the accuracy of using nuclear 18S rRNA genes for the classification of organisms in the subclass Copepoda. We suggest that sample identification accuracy should be considered when a molecular sequence divergence threshold is used for taxonomic identification, and that the lowest similarity threshold should be determined based on a pre-designated level of acceptable accuracy.

Flora of the city of Podgorica, Montenegro: Taxonomic analysis

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Stešević Danijela

2008-01-01

Full Text Available In this paper we present the taxonomic segment of a floristic study undertaken in the city of Podgorica in the period of 2002-2007. The check-list of spontaneously growing vascular plants includes 1227 species and subspecies belonging to 545 genera and 118 families. The dominant families are Poaceae (11.7%, asteraceae (11.2% and Fabaceae (9.2%. The most abundant genera are Trifolium (2.1%, Euphorbia (1.5%, Carex (1.5%, Bromus (1.3% and Vicia (1.2%. Analysis of the flora of Podgorica in comparison with some other european cities showed that the flora of Podgorica is most similar to that of Rome (Q/S= 0,7.

Two decades of climate driving the dynamics of functional and taxonomic diversity of a tropical small mammal community in western Mexico.

Science.gov (United States)

Mason-Romo, Edgard David; Farías, Ariel A; Ceballos, Gerardo

2017-01-01

Understanding the effects of global climate disruption on biodiversity is important to future conservation efforts. While taxonomic diversity is widely studied, functional diversity of plants, and recently animals, is receiving increasing attention. Most studies of mammals are short-term, focus on temperate habitats, and rely on traits described in the literature rather than generating traits from observations. Unlike previous studies, this long-term field study assessed the factors driving the functional and taxonomic diversity of small-mammal assemblages in dry tropical forests using both traits recorded from literature and a demographic database. We assessed the drivers (abundance and biomass, temperature and rainfall) of taxonomic richness and functional diversity for two rain-driven seasons in two adjacent but distinct forests-upland and lowland (arroyo or riparian) forests. Our analysis found that rainfall, both seasonal and atypical, was the primary factor driving functional and taxonomic diversity of small-mammal assemblages. Functional responses differed between the two types of forests, however, with effects being stronger in the harsher conditions of the upland forests than in the less severe conditions prevailing in the arroyo (riparian) forest. The latter also supports a richer, more diverse, and more stable small-mammal assemblage. These findings highlight the importance of climate to tropical biological diversity, as extreme climate events (hurricanes, droughts and floods) and disruption of rainfall patterns were shown to decrease biodiversity. They also support the need to preserve these habitats, as their high taxonomic diversity and functional redundancy makes them resilient against global climate disruption and local extreme events. Tropical dry forests constitute a potential reservoir for biodiversity and the ecosystem services they provide. Unfortunately, these forests are among the most endangered terrestrial ecosystems because of

Two decades of climate driving the dynamics of functional and taxonomic diversity of a tropical small mammal community in western Mexico.

Directory of Open Access Journals (Sweden)

Edgard David Mason-Romo

Full Text Available Understanding the effects of global climate disruption on biodiversity is important to future conservation efforts. While taxonomic diversity is widely studied, functional diversity of plants, and recently animals, is receiving increasing attention. Most studies of mammals are short-term, focus on temperate habitats, and rely on traits described in the literature rather than generating traits from observations. Unlike previous studies, this long-term field study assessed the factors driving the functional and taxonomic diversity of small-mammal assemblages in dry tropical forests using both traits recorded from literature and a demographic database. We assessed the drivers (abundance and biomass, temperature and rainfall of taxonomic richness and functional diversity for two rain-driven seasons in two adjacent but distinct forests-upland and lowland (arroyo or riparian forests. Our analysis found that rainfall, both seasonal and atypical, was the primary factor driving functional and taxonomic diversity of small-mammal assemblages. Functional responses differed between the two types of forests, however, with effects being stronger in the harsher conditions of the upland forests than in the less severe conditions prevailing in the arroyo (riparian forest. The latter also supports a richer, more diverse, and more stable small-mammal assemblage. These findings highlight the importance of climate to tropical biological diversity, as extreme climate events (hurricanes, droughts and floods and disruption of rainfall patterns were shown to decrease biodiversity. They also support the need to preserve these habitats, as their high taxonomic diversity and functional redundancy makes them resilient against global climate disruption and local extreme events. Tropical dry forests constitute a potential reservoir for biodiversity and the ecosystem services they provide. Unfortunately, these forests are among the most endangered terrestrial ecosystems because

Urbanization alters the functional composition, but not taxonomic diversity, of the soil nematode community

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Mitchell A. Pavao-Zuckerman; David C. Coleman

2007-01-01

We evaluated the response of riparian forest soil nematode community structure to the physico-chemical environment associated with urban land use. Soils were sampled seasonally between December 2000 and October 2002 along an urban-rural transect in Asheville, North Carolina. We characterized the taxonomic (to genus) and functional composition (trophic groups) of the...

The Influence of Wittgenstein’s Philosophy of Language on the Textual Production of the Vienna Group

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Luka Bešlagić

2016-04-01

Full Text Available The entirety of Wittgenstein’s problematization of language was of particular importance for numerous Austrian postwar artists and art movements, but was possibly most evident in the poetics and heterogeneous practices of the Vienna Group. Analysis of selected texts of the latter neo-avantgarde movement – namely, Konrad Bayer’s the philosopher’s stone1 (1963 and Oswald Wiener’s the improvement of central europe, novel (1969 – unveils the direct influence of both of the early and late Wittgenstein, paradigmatically represented by his two major books: Tractatus Logico-Philosophicus (1921 and Philosophical Investigations (1953. Texts of the Vienna Group to which this article refers to are not interpreted as literary works, but rather as diverse examples of textual production; instead of being analyzed as aesthetic objects, these texts are examined as platforms of potential inscription of Wittgensteinian critique of language.

Morphological variation and taxonomic interpretation in the moss genus Bryum in Antarctica

OpenAIRE

Seppelt,Rodney D.; Kanda,Hiroshi

1986-01-01

The potential for morphological variation in Antarctic species of Bryum is evaluated and related to problems associated with taxonomic interpretation based on specimens from the Soya Coast, Mac. Robertson Coast, Vestfold Hills and Knox Coast. B. argenteum HEDW. Has been positively determined for Continental Antarctica from six localities on the Soya Coast and from Ross Island, southern Victoria Land. Specimens from the Vestfold Hills and Knox Coast considered with some reservation as this spe...

The taxonomic implication of frontal tubercles in Polypedilum subgenera diagnoses, with re-description of Polypedilum isigabeceum Sasa & Suzuki (Diptera, Chironomidae).

Science.gov (United States)

Yamamoto, Nao; Yamamoto, Masaru

2016-11-15

Polypedilum isigabeceum Sasa et Suzuki, 2000 was described as belonging to subgenus Polypedilum s. str. However, if we accept the conclusion of Sæther et al. (2010), the species might be placed into Kribionympha with P. unagiquartum Sasa, 1985 because of the presence of distinct frontal tubercles in the adult males. However, other taxonomic characters do not support their treatment. P. isigabeceum is re-described and reconfirmed to be assigned to the subgenus Polypedilum s. str. The taxonomic meaning of frontal tubercles is discussed for defining the subgeneric rankings within genus Polypedilum.

Partitioning taxonomic diversity of aquatic insect assemblages and functional feeding groups in Neotropical Savanna headwater streams

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Biological diversity can be divided into: alpha (α, local), beta (β, difference in assemblage composition among locals), and gamma (γ, total diversity). We assessed the partitioning of taxonomic diversity of Ephemeroptera, Plecoptera and Trichoptera (EPT) and of functional feedin...

TaxCollector: Modifying Current 16S rRNA Databases for the Rapid Classification at Six Taxonomic Levels

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Eric W. Triplett

2010-07-01

Full Text Available The high level of conservation of 16S ribosomal RNA gene (16S rRNA in all Prokaryotes makes this gene an ideal tool for the rapid identification and classification of these microorganisms. Databases such as the Ribosomal Database Project II (RDP-II and the Greengenes Project offer access to sets of ribosomal RNA sequence databases useful in identification of microbes in a culture-independent analysis of microbial communities. However, these databases do not contain all of the taxonomic levels attached to the published names of the bacterial and archaeal sequences. TaxCollector is a set of scripts developed in Python language that attaches taxonomic information to all 16S rRNA sequences in the RDP-II and Greengenes databases. These modified databases are referred to as TaxCollector databases, which when used in conjunction with BLAST allow for rapid classification of sequences from any environmental or clinical source at six different taxonomic levels, from domain to species. The TaxCollector database prepared from the RDP-II database is an important component of a new 16S rRNA pipeline called PANGEA. The usefulness of TaxCollector databases is demonstrated with two very different datasets obtained using samples from a clinical setting and an agricultural soil. The six TaxCollector scripts are freely available on http://taxcollector.sourceforge.net and on http://www.microgator.org.

Quantifying the Relative Importance of Climate and Habitat on Structuring the Species and Taxonomic Diversity of Aquatic Plants in a Biodiversity Hotspot of Tropical Asia

International Nuclear Information System (INIS)

Chen, Y.

2015-01-01

It has not been well known how climate and habitat variables will influence the distribution of plant species to some extents at mesoscale. In this report, by using the distribution of aquatic plants in Western Ghats, a biodiversity hotspot in tropical Asian region, I quantify the relative importance of climate and habitat variables on structuring spatially species richness and taxonomic diversity patterns using structural equation modeling. All the sampling qudrats in the region used for the study has a spatial resolution of 0.5 latitude x 0.5 longitude. The results showed that species richness is high in both northern and southern part of the region, while low in the middle part. In contrast, taxonomic distinctiveness is relatively homogeneous over all the sampling quadrats in the region. Structural equation modeling suggested that taxonomic distinctiveness patterns of aquatic plants in the region follow temperature (partial regression coefficient=0.31, p<0.05) and elevational (partial regression coefficient=0.31, p<0.05) gradients, while richness patterns cannot be explained by any of the currently used variables. In conclusion, environmental variables that are related to taxonomic distinctiveness would not be related to richness, given the fact that these two quantities are orthogonal more or less. Both climate and habitat are equally influential on taxonomic distinctiveness patterns for aquatic plants in Western Ghats of India. (author)

Is Homo sapiens polytypic? Human taxonomic diversity and its implications.

Science.gov (United States)

Woodley, Michael A

2010-01-01

The term race is a traditional synonym for subspecies, however it is frequently asserted that Homo sapiens is monotypic and that what are termed races are nothing more than biological illusions. In this manuscript a case is made for the hypothesis that H. sapiens is polytypic, and in this way is no different from other species exhibiting similar levels of genetic and morphological diversity. First it is demonstrated that the four major definitions of race/subspecies can be shown to be synonymous within the context of the framework of race as a correlation structure of traits. Next the issue of taxonomic classification is considered where it is demonstrated that H. sapiens possesses high levels morphological diversity, genetic heterozygosity and differentiation (F(ST)) compared to many species that are acknowledged to be polytypic with respect to subspecies. Racial variation is then evaluated in light of the phylogenetic species concept, where it is suggested that the least inclusive monophyletic units exist below the level of species within H. sapiens indicating the existence of a number of potential human phylogenetic species; and the biological species concept, where it is determined that racial variation is too small to represent differentiation at the level of biological species. Finally the implications of this are discussed in the context of anthropology where an accurate picture of the sequence and timing of events during the evolution of human taxa are required for a complete picture of human evolution, and medicine, where a greater appreciation of the role played by human taxonomic differences in disease susceptibility and treatment responsiveness will save lives in the future.

Taxonomic composition of phytoplankton in the Vakh River (Western Siberia)

Science.gov (United States)

Skorobogatova, O. N.

2018-03-01

This paper provides data on the hydrological and hydrochemical parameters of the Vakh River in the Middle Ob region. In 2005-2008 we have identified 404 taxonomic units represented by 463 species, types and forms of algae, belonging to 140 genera, 52 families, 13 classes and 7 divisions. 386 species were identified for the first time, 141 taxa were identified as rare and 22 taxa as new for Western Siberia. Leading divisions, Bacillariophyta and Chlorophyta, make up for 78.9% of total phytoplankton diversity. Cyanobacteria, Chrysophyta and Euglenophyta form a community of 88 taxonomic units having a rank lower than genus level, and represent 19.0% of the total number. The floral role of Xanthophyta and Dinophyta is insignificant (2.1%). The main structure-forming species are 14: vegetating throughout the year (Aulacoseira italica, Asterionella formosa), summer taxa (Microcystis aeruginosa, Melosira varians, Aulacoseira granulata, Pandorina morum, Pediastrum boryanum, P. duplex, Lacunastrum gracillimum, Scenedesmus quadricauda) and summer-autumn (Microcystis pulverea, Tabellaria fenestrata, T. flocculosa, Mucidosphaerium pulchellum). The Vakh River demonstrates specific characteristics of boreal flowing waterways. The northern composition is represented in a big rate of families (44.2%) and genera (109 77.9) with one to three species. The richest genera Closterium (31 taxa), Eunotia (27 taxa), Pinnularia (22 taxa), Desmidium (11 taxa) and the family Desmidiaceae (45 taxa) ensure diversity of phytoplankton. Ecological and geographical analysis demonstrates predominance of cosmopolitan algae (56.6%). Plankton represents 44.7% of all algae, oligogalobs - 78.8% and indifferent algae – 36.7%. Water meets the requirements for β-mezosaprobian pollution zone, class of satisfactory purity (III class).

Discerning applicants’ interests in rural medicine: a textual analysis of admission essays

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Carol L. Elam

2015-03-01

Full Text Available Background: Despite efforts to construct targeted medical school admission processes using applicant-level correlates of future practice location, accurately gauging applicants’ interests in rural medicine remains an imperfect science. This study explores the usefulness of textual analysis to identify rural-oriented themes and values underlying applicants’ open-ended responses to admission essays. Methods: The study population consisted of 75 applicants to the Rural Physician Leadership Program (RPLP at the University of Kentucky College of Medicine. Using WordStat, a proprietary text analysis program, applicants’ American Medical College Application Service personal statement and an admission essay written at the time of interview were searched for predefined keywords and phrases reflecting rural medical values. From these text searches, derived scores were then examined relative to interviewers’ subjective ratings of applicants’ overall acceptability for admission to the RPLP program and likelihood of practicing in a rural area. Results: The two interviewer-assigned ratings of likelihood of rural practice and overall acceptability were significantly related. A statistically significant relationship was also found between the rural medical values scores and estimated likelihood of rural practice. However, there was no association between rural medical values scores and subjective ratings of applicant acceptability. Conclusions: That applicants’ rural values in admission essays were not related to interviewers’ overall acceptability ratings indicates that other factors played a role in the interviewers’ assessments of applicants’ acceptability for admission.

Discerning applicants' interests in rural medicine: a textual analysis of admission essays.

Science.gov (United States)

Elam, Carol L; Weaver, Anthony D; Whittler, Elmer T; Stratton, Terry D; Asher, Linda M; Scott, Kimberly L; Wilson, Emery A

2015-01-01

Despite efforts to construct targeted medical school admission processes using applicant-level correlates of future practice location, accurately gauging applicants' interests in rural medicine remains an imperfect science. This study explores the usefulness of textual analysis to identify rural-oriented themes and values underlying applicants' open-ended responses to admission essays. The study population consisted of 75 applicants to the Rural Physician Leadership Program (RPLP) at the University of Kentucky College of Medicine. Using WordStat, a proprietary text analysis program, applicants' American Medical College Application Service personal statement and an admission essay written at the time of interview were searched for predefined keywords and phrases reflecting rural medical values. From these text searches, derived scores were then examined relative to interviewers' subjective ratings of applicants' overall acceptability for admission to the RPLP program and likelihood of practicing in a rural area. The two interviewer-assigned ratings of likelihood of rural practice and overall acceptability were significantly related. A statistically significant relationship was also found between the rural medical values scores and estimated likelihood of rural practice. However, there was no association between rural medical values scores and subjective ratings of applicant acceptability. That applicants' rural values in admission essays were not related to interviewers' overall acceptability ratings indicates that other factors played a role in the interviewers' assessments of applicants' acceptability for admission.

Morphological variations caused by fixation techniques may lead to taxonomic confusion in Laeonereis (Polychaeta: Nereididae

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Verônica M. Oliveira

2010-02-01

Full Text Available The nereidid polychaete Laeonereis acuta (Treadwell, 1923 is either considered to be a valid species, or a synonym of Laeonereis culveri (Webster, 1879. The species epithet, acuta, refers to the acuminate anterior region of the body followed by a widening that is visible up to the 10th setiger. The relative width of the anterior region of the body, however, has been reported in the taxonomic literature as variable for Laeonereis Hartman, 1945, a genus known from the eastern coast of North America to Patagonia (southern South America. To test whether variations in this character are real, or whether they correspond to an artifact, we analyzed morphological changes associated with different anesthesia and fixation techniques regularly used to prepare specimens of Laeonereis from southern Brazil (formerly reported as L. acuta. Six treatments, including combinations of anesthetics and fixative agents, and a control, were evaluated in groups of 25 adult animals. A simple model II regression analysis on living specimens showed that the growth is approximately isometric. One-way ANOVA was used to compare the treatment effect on the ratio of peristome width: setiger 6 width. This ratio was smaller in non-anesthetized individuals, especially when prepared in formalin and freshwater. When anesthetized with menthol and fixed in formalin with sea water, individuals retained a shape that was closest to their in vivo shape. Consequently, our results suggest that fixation without prior anesthesia is not recommended for morphological and taxonomical studies. Since morphology and morphometrics of the anterior region are consistently influenced by preparation techniques, it is likely that inadequate fixation routines have introduced several errors in the taxonomic and ecological literature of Laeonereis.

Beta Diversity in a Highly Heterogeneous Area: Disentangling Species and Taxonomic Dissimilarity for Terrestrial Vertebrates.

Science.gov (United States)

Calderón-Patrón, Jaime M; Goyenechea, Irene; Ortiz-Pulido, Raúl; Castillo-Cerón, Jesús; Manriquez, Norma; Ramírez-Bautista, Aurelio; Rojas-Martínez, Alberto E; Sánchez-Rojas, Gerardo; Zuria, Iriana; Moreno, Claudia E

2016-01-01

Quantifying differences in species composition among communities provides important information related to the distribution, conservation and management of biodiversity, especially when two components are recognized: dissimilarity due to turnover, and dissimilarity due to richness differences. The ecoregions in central Mexico, within the Mexican Transition Zone, have outstanding environmental heterogeneity and harbor huge biological richness, besides differences in the origin of the biota. Therefore, biodiversity studies in this area require the use of complementary measures to achieve appropriate information that may help in the design of conservation strategies. In this work we analyze the dissimilarity of terrestrial vertebrates, and the components of turnover and richness differences, among six ecoregions in the state of Hidalgo, central Mexico. We follow two approaches: one based on species level dissimilarity, and the second on taxonomic dissimilarity. We used databases from the project "Biodiversity in the state of Hidalgo". Our results indicate that species dissimilarity is higher than taxonomic dissimilarity, and that turnover contributes more than richness differences, both for species and taxonomic total dissimilarity. Moreover, total dissimilarity, turnover dissimilarity and the dissimilarity due to richness differences were positively related in the four vertebrate groups. Reptiles had the highest values of dissimilarity, followed by mammals, amphibians and birds. For reptiles, birds, and mammals, species turnover was the most important component, while richness differences had a higher contribution for amphibians. The highest values of dissimilarity occurred between environmentally contrasting ecoregions (i.e., tropical and temperate forests), which suggests that environmental heterogeneity and differences in the origin of biotas are key factors driving beta diversity of terrestrial vertebrates among ecoregions in this complex area.

Beta Diversity in a Highly Heterogeneous Area: Disentangling Species and Taxonomic Dissimilarity for Terrestrial Vertebrates

Science.gov (United States)

Calderón-Patrón, Jaime M.; Goyenechea, Irene; Ortiz-Pulido, Raúl; Castillo-Cerón, Jesús; Manriquez, Norma; Ramírez-Bautista, Aurelio; Rojas-Martínez, Alberto E.; Sánchez-Rojas, Gerardo; Zuria, Iriana

2016-01-01

Quantifying differences in species composition among communities provides important information related to the distribution, conservation and management of biodiversity, especially when two components are recognized: dissimilarity due to turnover, and dissimilarity due to richness differences. The ecoregions in central Mexico, within the Mexican Transition Zone, have outstanding environmental heterogeneity and harbor huge biological richness, besides differences in the origin of the biota. Therefore, biodiversity studies in this area require the use of complementary measures to achieve appropriate information that may help in the design of conservation strategies. In this work we analyze the dissimilarity of terrestrial vertebrates, and the components of turnover and richness differences, among six ecoregions in the state of Hidalgo, central Mexico. We follow two approaches: one based on species level dissimilarity, and the second on taxonomic dissimilarity. We used databases from the project “Biodiversity in the state of Hidalgo”. Our results indicate that species dissimilarity is higher than taxonomic dissimilarity, and that turnover contributes more than richness differences, both for species and taxonomic total dissimilarity. Moreover, total dissimilarity, turnover dissimilarity and the dissimilarity due to richness differences were positively related in the four vertebrate groups. Reptiles had the highest values of dissimilarity, followed by mammals, amphibians and birds. For reptiles, birds, and mammals, species turnover was the most important component, while richness differences had a higher contribution for amphibians. The highest values of dissimilarity occurred between environmentally contrasting ecoregions (i.e., tropical and temperate forests), which suggests that environmental heterogeneity and differences in the origin of biotas are key factors driving beta diversity of terrestrial vertebrates among ecoregions in this complex area. PMID:27500934

Asian longhorned beetle complicates the relationship between taxonomic diversity and pest vulnerability in street tree assemblages

Science.gov (United States)

Urban foresters routinely emphasise the importance of taxonomic diversity to reduce the vulnerability of tree assemblages to invasive pests, but it is unclear to what extent diversity reduces vulnerability to polyphagous (i.e. generalist) pests. Drawing on field data from seven c...

[Herbal textual research on relationship between Chinese medicine"Shihu" (Dendrobium spp.) and "Tiepi Shihu" (D. catenatum)].

Science.gov (United States)

Si, Jin-Ping; Zhang, Yuan; Luo, Yi-Bo; Liu, Jing-Jing; Liu, Zhong-Jian

2017-05-01

Dendrobium species on the ancient Chinese herbal texts were investigated in this paper, including their dscriptions of original species, producing areas and quality. Our results indicated that the major producing areas were Lu'an, Anhui province and Wenzhou, Taizhou, Zhejiang province. In addition, the sweet flavor, short, thin and solid stems were standing for good quality. Based on the stable producing areas and quality descriptions, D. catenatum (D. officinale) ("Tiepi Shihu") and D. houshanense were high quality medicinal Dendrobium species ("Shihu" ) in ancient China. Besides, there were 3 scientific names for "Tiepi Shihu", including D. candidum, D. officinale, D. catenatum. After textual investigation, We suggest that D. catenatum should be its scientific name, and D. officinale was synonyms published later. However, the name "D. officinale" could be reserved as it is much more popular used in publication and commodities. Moreover, its Chinese name should be "Tiepi Shihu". Copyright© by the Chinese Pharmaceutical Association.

Contrasting taxonomic and functional responses of a tropical tree community to selective logging

OpenAIRE

Baraloto, C.; Hérault, B.; Paine, C. E. T.; Massot, H.; Blanc, L.; Bonal, D.; Molino, Jean-François; Nicolini, E. A.; Sabatier, Daniel

2012-01-01

1. Considerable debate surrounds the extent to which tropical forests can be managed for resource extraction while conserving biodiversity and ecosystem properties, which depend on functional composition. Here we evaluate the compatibility of these aims by examining the effects of logging on taxonomic and functional diversity and composition in a tropical forest. 2. Twenty years after selective logging, we inventoried 4140 stems regenerating in logging gaps and adjacent undisturbed areas, and...

Differences in Processing of Taxonomic and Sequential Relations in Semantic Memory: An fMRI Investigation

Science.gov (United States)

Kuchinke, Lars; van der Meer, Elke; Krueger, Frank

2009-01-01

Conceptual knowledge of our world is represented in semantic memory in terms of concepts and semantic relations between concepts. We used functional magnetic resonance imaging (fMRI) to examine the cortical regions underlying the processing of sequential and taxonomic relations. Participants were presented verbal cues and performed three tasks:…

Método para la construcción de una taxonomía: estructura base para riesgos en outsourcing de software

OpenAIRE

Gloria Piedad Gasca Hurtado; Bell Manrique Losada

2011-01-01

Este artículo propone una taxonomía de riesgos enfocada en el ámbito de outsourcing de software. El objetivo es definir una estructura de clasificación de riesgos, relacionada con el proceso de outsourcing de software. La motivación está dada por la importancia que tiene la identificación de riesgos, y la ayuda que prestan las taxonomías al respecto, por lo cual se les conoce como una técnica efectiva que permite desarrollar una mejor gestión de riesgos. Este artículo incluye el método para c...

Taxonomic study on Navicula sensu lato from inland waters in the Arctic

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Hiroshi Fukushima

2013-07-01

Full Text Available Very few comparative taxonomic studies on Arctic and circumboreal diatoms have been conducted in recent years. During the period of Aug. 1996 to 1999 (table 1, we visited a number of island within the Arctic Circle (Baf?n Island, Coburg Island, Beechey Island, Devon Island, Cornwallis Island, Spitsbergen, Greenland and collected specimens of 20 algal taxa (identi?ed by micrograph observations of Navicula sensu lato (Chamaepinnularia: 6 taxa, Geissleria: 1 taxon, Luticola: 1 taxon, Navicula: 11 taxa, Placoneis: 1 taxon.

The language of racism. Textual testimonies of Jewish-Arab hostility in the Israeli Academia

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Tamar Heger

2015-02-01

Full Text Available The persistent Jewish Arab conflict is present in every aspect of life in Israeli society and its echoes penetrate the everyday reality of higher educational institutions. Feelings of mutual hostility among Arab and Jewish students, faculty and administration are common experiences on Israeli campuses. This article analyzes two textual expressions of this mutual resentment which were circulated in 2011 in Tel Hai College, Israel. One of the texts was produced by Muslim Arab student association and the other by a Zionist Jewish organization. Both groups are present on every campus in Israel. Despite the significant difference of the political location occupied by each organization in the Israeli power structure, we argue that these texts share similar attitudes to the conflict and parallel operational strategies. The paper demonstrates the attempts by these texts to encourage the mutual hostility between Jews and Arabs by employing racist and violent discourse. The article tries to explain the silence of the college administration and faculty in the face of these racist acts, subsequently outlining a vision of a responsible academia which will banish any acts of racism.

Estratégias de leitura e compreensão textual em universitários

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Lucicleide Maria de Cantalice

Full Text Available O objetivo deste estudo foi explorar a compreensão textual em universitários e o uso das estratégias metacognitivas de leitura, considerando a faixa etária dos mesmos. Cento e dez universitários (110 do curso de psicologia de uma universidade privada paulista participaram da investigação. Foram utilizados uma escala de estratégias metacognitivas de leitura e um texto de 250 vocábulos preparado segundo a técnica de Cloze em sua versão tradicional, cuja característica é a omissão de todos os quintos vocábulos do texto. A aplicação foi coletiva naqueles estudantes que consentiram participar. Os dados foram submetidos à estatística inferencial e evidenciaram relação estatisticamente significativa entre a pontuação na escala de estratégias metacognitivas de leitura e os escores do Cloze. Foi possível também evidenciar diferenças na pontuação na compreensão em leitura dos estudantes, considerando a faixa etária dos mesmos.

The third language: A recurrent textual restriction that translators come across in audiovisual translation.

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Montse Corrius Gimbert

2005-01-01

Full Text Available If the process of translating is not at all simple, the process of translating an audiovisual text is still more complex. Apart rom technical problems such as lip synchronisation, there are other factors to be considered such as the use of the language and textual structures deemed appropriate to the channel of communication. Bearing in mind that most of the films we are continually seeing on our screens were and are produced in the United States, there is an increasing need to translate them into the different languages of the world. But sometimes the source audiovisual text contains more than one language, and, thus, a new problem arises: the ranslators face additional difficulties in translating this “third language” (language or dialect into the corresponding target culture. There are many films containing two languages in the original version but in this paper we will focus mainly on three films: Butch Cassidy and the Sundance Kid (1969, Raid on Rommel (1999 and Blade Runner (1982. This paper aims at briefly illustrating different solutions which may be applied when we come across a “third language”.

Taxonomic and functional composition of arthropod assemblages across contrasting Amazonian forests.

Science.gov (United States)

Lamarre, Greg P A; Hérault, Bruno; Fine, Paul V A; Vedel, Vincent; Lupoli, Roland; Mesones, Italo; Baraloto, Christopher

2016-01-01

Arthropods represent most of global biodiversity, with the highest diversity found in tropical rain forests. Nevertheless, we have a very incomplete understanding of how tropical arthropod communities are assembled. We conducted a comprehensive mass sampling of arthropod communities within three major habitat types of lowland Amazonian rain forest, including terra firme clay, white-sand and seasonally flooded forests in Peru and French Guiana. We examined how taxonomic and functional composition (at the family level) differed across these habitat types in the two regions. The overall arthropod community composition exhibited strong turnover among habitats and between regions. In particular, seasonally flooded forest habitats of both regions comprised unique assemblages. Overall, 17·7% (26 of 147) of arthropod families showed significant preferences for a particular habitat type. We present a first reproducible arthropod functional classification among the 147 taxa based on similarity among 21 functional traits describing feeding source, major mouthparts and microhabitats inhabited by each taxon. We identified seven distinct functional groups whose relative abundance contrasted strongly across the three habitats, with sap and leaf feeders showing higher abundances in terra firme clay forest. Our novel arthropod functional classification provides an important complement to link these contrasting patterns of composition to differences in forest functioning across geographical and environmental gradients. This study underlines that both environment and biogeographical processes are responsible for driving arthropod taxonomic composition while environmental filtering is the main driver of the variance in functional composition. © 2015 The Authors. Journal of Animal Ecology © 2015 British Ecological Society.

Taxonomic key for the genera of Elmidae (Coleoptera, Byrrhoidea occurring in Goiás State, Brazil, including new records and distributional notes

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Felipe F. Barbosa

2013-06-01

Full Text Available A taxonomic key for the genera of Elmidae (Coleoptera, Byrrhoidea occurring in Goiás State, Brazil, including new records and distributional notes. Despite their great diversity and high abundance in Neotropical aquatic environments, the fauna of Elmidae remains practically unknown in some areas and even entire biomes in this region. In this work we bring, for the first time, faunistic data for the Elmidae of central Brazil. The aim of this work was to inventory the Elmidae fauna in central, southwestern and southeastern Goiás State, Brazil and to produce a taxonomic key, at genus level, for adults from the studied region. The taxonomic key presented herein offers means for the identification of all the 13 genera known to occur in Goiás, 11 of them being new records for the State. Moreover, the number of named species registered for Goiás increased from one to nine.

Compreensão textual em alunos de segunda e terceira séries: uma abordagem cognitiva Text comprehension in second and third graders: a cognitive approach

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Jerusa Fumagalli de Salles

2004-04-01

Full Text Available Este estudo teve como objetivo analisar a compreensão de leitura textual de alunos de 2ª e 3ª séries. Participaram 76 crianças, com média de idade de 8,1 anos. Cada criança lia a história, recontava-a e, posteriormente, respondia a questões. Os recontos foram analisados segundo o Modelo de Compreensão Textual de Kintsch & van Dijk (1978 e Kintsch (1988, 1998. A amostra relatou, em média, 21,07% da estrutura proposicional da história, sendo mais freqüente o relato de macroproposições. Alunos da terceira série foram superiores aos da segunda série no relato de microproposições menos relevantes do texto e em responder a questões pontuais sobre a história. Foi encontrada uma correlação significativa entre idade e o reconto da macroestrutura textual. Os resultados sugerem que durante os primeiros anos de escolarização ocorreu uma melhora da memorização de detalhes, enquanto que a retenção das idéias essenciais foi influenciada pelas variações de idade das crianças.This study aimed to analyze text comprehension of students of the 2nd and 3rd grades. The sample was constituted by 76 children, at an average of 8.1 years old. Each child read the story, retold it and, afterwards, answered questions about it. The retellings were analyzed according to the model of Text Comprehension of Kintsch and van Dijk (1978 and Kintsch (1988, 1998. The sample recalled a mean of 21.07% of the proposition structure of the story, being the report of macropropositions more frequent. Students of the third grade told larger percentage of irrelevant micropropositions of the text and they were superior in answering to specific questions than students of the second grade. A significant correlation was found between age and macroproposition's retelling. The results suggest that during the first years of schooling there is an improvement of the detail-remembering, whereas the retention of the essential ideas is influenced by age differences.

How to deal with cryptic species in Enchytraeidae, with recommendations on taxonomical descriptions

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Schmelz, R. M.

2017-11-01

Full Text Available During the 12th International Symposium on Enchytraeidae, held in Tihany, Hungary (27–29 June 2016, the participants discussed cryptic species, i.e., species that are morphologically so similar that they are classified as the same species (Bickford et al. 2007, and how to deal with them taxonomically. Here we summarise the discussion together with a few additional comments, and we give recommendations for species descriptions in Enchytraeidae.

Fossil struthionid eggshells from Laetoli, Tanzania: Taxonomic and biostratigraphic significance

Science.gov (United States)

Harrison, Terry; Msuya, Charles P.

2005-04-01

Recent paleontological investigations at Laetoli and neighboring localities in northern Tanzania have produced a large collection of fossil ostrich eggshells from the Pliocene-aged Laetolil Beds (˜3.5-4.5 Ma) and Ndolanya Beds (˜2.6-2.7 Ma). A detailed analysis of the morphology of the eggshells and their taxonomic affinities indicates that two different species of Struthio are represented. In the Lower Laetolil Beds and in the Upper Laetolil Beds below Tuff 3 a new species is recognized— Struthio kakesiensis. This is replaced in the Upper Laetolil Beds by Struthio camelus, the modern species of ostrich. Since radiometric age determinations are available for the stratigraphic sequence at Laetoli, it is possible to precisely date the first appearance of S. camelus at ˜3.6-3.8 Ma. Comparisons of the Laetoli material with specimens from the well-dated sequences at Lothagam and Kanapoi in northern Kenya, allow the taxonomic and biochronological analysis to be extended back in time to the late Miocene. At about 6.5 Ma, Diamantornis and elephant birds were replaced in East Africa by ostriches belonging to the genus Struthio. Three time-successive species of ostriches are identified in the fossil record of East Africa, beginning with Struthio. cf. karingarabensis (˜6.5-4.2 Ma), followed by S. kakesiensis (˜4.5-3.6 Ma) and then S. camelus (˜3.8 Ma onwards). A similar sequence of taxa has previously been recorded from localities in Namibia, but at these sites there is no possibility to precisely calibrate the ages of the different species using radiometric dating. Nevertheless, the broadly similar evolutionary sequence and the close correspondence in inferred ages for the succession of species in East Africa and Namibia suggest that ostrich eggshells are a very useful tool for biochronological correlation of paleontological sites in sub-Saharan Africa.

Revision of the taxonomic status of Aphis floridanae Tissot (Hemiptera:Aphididae) using morphological and molecular insight

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Three Aphis species are involved in this study. Aphis floridanae Tissot, 1933 and A. nasturtii Kaltenbach, 1843 are currently treated as synonym, and A. impatientis Thomas, 1878 has a valid taxonomic status. Morphological and cytochrome oxidase 1 (Cox1) data show that Aphis floridanae is not synonym...

Spatio-temporal variation of fish taxonomic composition in a South-East Asian flood-pulse system.

Science.gov (United States)

Kong, Heng; Chevalier, Mathieu; Laffaille, Pascal; Lek, Sovan

2017-01-01

The Tonle Sap Lake (TSL) is a flood-pulse system. It is the largest natural lake in South-East Asia and constitutes one of the largest fisheries over the world, supporting the livelihood of million peoples. Nonetheless, the Mekong River Basin is changing rapidly due to accelerating water infrastructure development (hydropower, irrigation, flood control, and water supply) and climate change, bringing considerable modifications to the annual flood-pulse of the TSL. Such modifications are expected to have strong impacts on fish biodiversity and abundance. This paper aims to characterize the spatio-temporal variations of fish taxonomic composition and to highlights the underlying determinants of these variations. For this purpose, we used data collected from a community catch monitoring program conducted at six sites during 141 weeks, covering two full hydrological cycles. For each week, we estimated beta diversity as the total variance of the site-by-species community matrix and partitioned it into Local Contribution to Beta Diversity (LCBD) and Species Contribution to Beta Diversity (SCBD). We then performed multiple linear regressions to determine whether species richness, species abundances and water level explained the temporal variation in the contribution of site and species to beta diversity. Our results indicate strong temporal variation of beta diversity due to differential contributions of sites and species to the spatial variation of fish taxonomic composition. We further found that the direction, the shape and the relative effect of species richness, abundances and water level on temporal variation in LCBD and SCBD values greatly varied among sites, thus suggesting spatial variation in the processes leading to temporal variation in community composition. Overall, our results suggest that fish taxonomic composition is not homogeneously distributed over space and time and is likely to be impacted in the future if the flood-pulse dynamic of the system is

Taxonomic and nomenclatural rearrangements in Artemisia subgen. Tridentatae, including a redefinition of Sphaeromeria (Asteraceae, Anthemideae)

Science.gov (United States)

Sonia Garcia; Teresa Garnatje; E. Durant McArthur; Jaume Pellicer; Stewart C. Sanderson; Joan Valles

2011-01-01

A recent molecular phylogenetic study of all members of Artemisia subgenus Tridentatae, as well as most of the other New World endemic Artemisia and the allied genera Sphaeromeria and Picrothamnus, raised the necessity of revising the taxonomic framework of the North American endemic Artemisia. Composition of the subgenus Tridentatae is enlarged to accommodate other...

Temporal and spatial differences between taxonomic and trait biodiversity in a large marine ecosystem: Causes and consequences

DEFF Research Database (Denmark)

Dencker, Tim Spaanheden; Pécuchet, Lauréne; Beukhof, Esther

2017-01-01

Biodiversity is a multifaceted concept, yet most biodiversity studies have taken a taxonomic approach, implying that all species are equally important. However, species do not contribute equally to ecosystem processes and differ markedly in their responses to changing environments. This recogniti...

The concentration of 137Cs and stable Cs in zooplankton in the western North Pacific in relation to their taxonomic composition

International Nuclear Information System (INIS)

Kaeriyama, Hideki; Watabe, Teruhisa; Kusakabe, Masashi

2008-01-01

The objective of this study is to obtain information on the background level of 137 Cs in zooplankton in the waters close to Rokkasho-mura in Aomori Prefecture, Japan, where a large-scale project has been progressively promoted to establish the nuclear fuel cycle. Prior to the full-scale operation of the spent nuclear fuel reprocessing plant, zooplankton samples were collected in May and October 2005, June 2006, and June 2007 from the surface water (0-5 m depth). The samples were analyzed to determine the concentrations of 137 Cs and stable Cs in relation to taxonomic composition. The numerical abundance of the plankton varied from 253 to 1514 inds. m -3 . Taxonomic composition differed between the two sampling periods. Although copepods formed the most abundant taxonomic group during both seasons, gelatinous plankton (chaetognaths, siphonophores, appendicularians and doliolids) were more abundant in October 2005 than in June 2006 and June 2007. The concentration of 137 Cs in zooplankton varied from 11 to 24 mBq kg-WW -1 . At the same station, the 137 Cs concentration in zooplankton in October 2005 was almost twice as much as that in June 2006, although the concentration of 137 Cs in seawater did not show a difference. The concentration of stable Cs was measured for each taxonomic group: that in gelatinous zooplankton (chaetognaths) was higher than that in crustacean zooplankton (copepods, euphausiids and amphipods). These results suggest that the concentration of 137 Cs in zooplankton is affected by the occurrence of gelatinous zooplankton. (author)

The Conventional and Unconventional about Disability Conventions: A Reflective Analysis of United Nations Convention on the Rights of Persons with Disabilities

Science.gov (United States)

Umeasiegbu, Veronica I.; Bishop, Malachy; Mpofu, Elias

2013-01-01

This article presents an analysis of the United Nations Convention on the Rights of Persons with Disabilities (CRPD) in relation to prior United Nations conventions on disability and U.S. disability policy law with a view to identifying the conventional and also the incremental advances of the CRPD. Previous United Nations conventions related to…

Classification of Pinus patula, P. tecunumanii, P. oocarpa, P. caribaea var. hondurensis, and Related Taxonomic Entities

Science.gov (United States)

A.E. Squillace; Jesse P. Perry

1992-01-01

Stem xylem terpenes of 75 pine populations were studied to determine relationships among taxonomic entities. Typical Pinus patula populations occurring in areas north and west of Oaxaca, Mexico, had very high proportions of 3-phellandrene and low proportions of other constituents. Terpene compositions of populations of variety longipeduncalatain...

Revision of the Paris Convention and the Brussels Supplementary Convention

International Nuclear Information System (INIS)

Busekist, Otto von.

1977-01-01

The Paris Convention and the Brussels Supplementary Convention have in substance remained unchanged since their adoption in 1960 and 1963, respectively. During that period, nuclear industry and technology have developed considerably while the financial and monetary bases of the Conventions have been shattered. The amounts of liability and compensation have been eroded by inflation, and the gold-based unit of account in which these amounts are expressed has lost its original meaning after the abolition of the official gold price. The question of revising the Conventions, in particular of raising those amounts and of replacing the unit of account, is therefore being studied by the Group of Governmental Experts on Third party Liability in the Field of Nuclear Energy of the OECD Nuclear Energy Agency. (auth.) [fr

Norman Fairclough’s Textually Oriented Discourse Analysis in Vladimir Nabokov’s Lolita

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Pegah Sheibeh

2016-03-01

Full Text Available The present study is an attempt to use “textually oriented discourse analysis” of Norman Fairclough, (1941, to offer a new reading of Vladimir Nabokov’s Lolita (1955. The researcher found it quite appropriate to read the chosen work through Fairclough’s stylistic and discursive features in order to represent the identities of the main characters. Nabokov’s works represent an important portrayal of discursive challenges in the post-war American society that is largely invested in Fairclough’s theory. One of the most apparent aspects in Nabokov’s works is that of social identity and subject formation. As discourse theory denotes, a subject 'misrepresents' the world in ideology because he wants to do so, because there is some reward or benefit to him in doing so. Similarly Humbert Humbert in Lolita is looking for an imaginary world by which he can hide his suppressed identity. He fakes a new identity for himself through fiction. Considering the style of narration in Lolita, some reader consider Humbert as an unreliable narrator, he sometimes makes up some events and in some parts of the story he seems insane and uncertain. In Lolita Nabokov tries to show that each individual creates his/her reality and do not reflect reality. Humbert narrates his personal story from his point of view which might be different from people around him. Reality in Nabokov’s perspective is subjective and mixture of memory and imagination.

Sustentabilidade e entropia na geração textual variacional: PoemAds - sob o signo da devoração

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Rui Torres

2012-12-01

Full Text Available http://dx.doi.org/10.5007/1807-9288.2012v8n2p361   Descrição e contextualização teórica de um conjunto de poemas digitais realizados com o apoio do motor textual Poemário, seguindo procedimentos combinatórios e generativos. Este trabalho de literatura electrónica foi programado a partir da conjugação de vários slogans publicitários, constituindo dessa forma uma plagiotropia e uma devoração da publicidade actual. O léxico que alimenta estes processos foi tratado e seleccionado a partir de aproximadamente 10.000 anúncios publicitários e propagandísticos em língua portuguesa.

Taxonomic Analysis of Voivodships Development in Terms of ICT Usage in Enterprises

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Kaczmarczyk Paweł

2017-12-01

Full Text Available The aim of this paper is to analyse the development of voivodships in terms of ICT usage in enterprises by means of taxonomic methods. The theoretical part of the paper has been devoted to the role of modern information and communication technologies in post-industrial enterprises, in particular to the meaning of these technologies for new management concepts (e-business, online marketing, CRM, network management, X-engineering. The research methodology has been carried out, with special attention being paid to the agglomerative clustering method and optimization clustering method.

Computing the Taxonomic, Morphological and Sexual Variations of Bornean Hornbills (family: Bucerotidae)

Science.gov (United States)

Laman, Charlie J. M.; Kho, Angel

Bornean Hornbills (Family Bucerotidae) are omnivorous creatures, distinguished for their large size and large bill. In our study, only five out of eight species of Bornean hornbills were available. Our aims were to determine the taxonomic, morphological and sexual variations, among the species. Nine morphological features were measured from 83 specimens. Canonical Discriminant and Cluster analyses showed that the data were successfully clustered into 5 species. Logistic regression analyses showed that the diagnostic character differentiation is total length. Further results showed that males tend to be bigger than females.

Recognizing Textual Entailment with Attentive Reading and Writing Operations

DEFF Research Database (Denmark)

Liu, Liang; Huo, Huan; Liu, Xiufeng

2018-01-01

-range dependency. In this paper, we propose to facilitate the conventional attentive reading operations with two sophisticated writing operations - forget and update. Instead of utilizing a single vector that accommodates the attention history, we write the past attention information directly into the sentence...

Metacoder: An R package for visualization and manipulation of community taxonomic diversity data.

Directory of Open Access Journals (Sweden)

Zachary S L Foster

2017-02-01

Full Text Available Community-level data, the type generated by an increasing number of metabarcoding studies, is often graphed as stacked bar charts or pie graphs that use color to represent taxa. These graph types do not convey the hierarchical structure of taxonomic classifications and are limited by the use of color for categories. As an alternative, we developed metacoder, an R package for easily parsing, manipulating, and graphing publication-ready plots of hierarchical data. Metacoder includes a dynamic and flexible function that can parse most text-based formats that contain taxonomic classifications, taxon names, taxon identifiers, or sequence identifiers. Metacoder can then subset, sample, and order this parsed data using a set of intuitive functions that take into account the hierarchical nature of the data. Finally, an extremely flexible plotting function enables quantitative representation of up to 4 arbitrary statistics simultaneously in a tree format by mapping statistics to the color and size of tree nodes and edges. Metacoder also allows exploration of barcode primer bias by integrating functions to run digital PCR. Although it has been designed for data from metabarcoding research, metacoder can easily be applied to any data that has a hierarchical component such as gene ontology or geographic location data. Our package complements currently available tools for community analysis and is provided open source with an extensive online user manual.

Clinical and taxonomic status of pathogenic nonpigmented or late-pigmenting rapidly growing mycobacteria.

Science.gov (United States)

Brown-Elliott, Barbara A; Wallace, Richard J

2002-10-01

The history, taxonomy, geographic distribution, clinical disease, and therapy of the pathogenic nonpigmented or late-pigmenting rapidly growing mycobacteria (RGM) are reviewed. Community-acquired disease and health care-associated disease are highlighted for each species. The latter grouping includes health care-associated outbreaks and pseudo-outbreaks as well as sporadic disease cases. Treatment recommendations for each species and type of disease are also described. Special emphasis is on the Mycobacterium fortuitum group, including M. fortuitum, M. peregrinum, and the unnamed third biovariant complex with its recent taxonomic changes and newly recognized species (including M. septicum, M. mageritense, and proposed species M. houstonense and M. bonickei). The clinical and taxonomic status of M. chelonae, M. abscessus, and M. mucogenicum is also detailed, along with that of the closely related new species, M. immunogenum. Additionally, newly recognized species, M. wolinskyi and M. goodii, as well as M. smegmatis sensu stricto, are included in a discussion of the M. smegmatis group. Laboratory diagnosis of RGM using phenotypic methods such as biochemical testing and high-performance liquid chromatography and molecular methods of diagnosis are also discussed. The latter includes PCR-restriction fragment length polymorphism analysis, hybridization, ribotyping, and sequence analysis. Susceptibility testing and antibiotic susceptibility patterns of the RGM are also annotated, along with the current recommendations from the National Committee for Clinical Laboratory Standards (NCCLS) for mycobacterial susceptibility testing.

Taxonomic reference libraries for environmental barcoding: a best practice example from diatom research.

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Jonas Zimmermann

Full Text Available DNA barcoding uses a short fragment of a DNA sequence to identify a taxon. After obtaining the target sequence it is compared to reference sequences stored in a database to assign an organism name to it. The quality of data in the reference database is the key to the success of the analysis. In the here presented study, multiple types of data have been combined and critically examined in order to create best practice guidelines for taxonomic reference libraries for environmental barcoding. 70 unialgal diatom strains from Berlin waters have been established and cultured to obtain morphological and molecular data. The strains were sequenced for 18S V4 rDNA (the pre-Barcode for protists as well as rbcL data, and identified by microscopy. LM and for some strains also SEM pictures were taken and physical vouchers deposited at the BGBM. 37 freshwater taxa from 15 naviculoid diatom genera were identified. Four taxa from the genera Amphora, Mayamaea, Planothidium and Stauroneis are described here as new. Names, molecular, morphological and habitat data as well as additional images of living cells are also available electronically in the AlgaTerra Information System. All reference sequences (or reference barcodes presented here are linked to voucher specimens in order to provide a complete chain of evidence back to the formal taxonomic literature.

Taxonomic Diversity of Fungi Associated with Some PCN Populations from Serbia

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Violeta Oro

2012-01-01

Full Text Available Increased content of pesticides in food chain resulted in using microorganisms asagents of biological control. The potato cyst nematodes (PCN - Globodera pallida and G.rostochiensis belong to the group of the most important parasites - the quarantine organisms.The external and internal area of a cyst harbor numerous fungal and bacterial species.The aim of this study was to identify antagonistic fungi associated with some PCN populationsfrom Serbia. Fungal antagonists of potato cyst nematodes have not been previouslyinvestigated in our country. The diversity of PCN fungal antagonists is not reflected only atthe species level but also at the level of higher taxonomic categories.

CITOGENÉTICA COMO HERRAMIENTA TAXONÓMICA EN PECES I CYTOGENETICS AS A TAXONOMIC TOOL IN FISH

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Mauro Nircho

2018-04-01

Full Text Available This document presents a general overview on the basic and molecular techniques more commonly employed for the study of chromosomes in fi shes, with examples that demonstrate the usefulness of cytogenetics to resolve taxonomic problems, particularly when meristic or morphometric characteristic do not result in a clear differentiation between species.

Memory systems, processes, and tasks: taxonomic clarification via factor analysis.

Science.gov (United States)

Bruss, Peter J; Mitchell, David B

2009-01-01

The nature of various memory systems was examined using factor analysis. We reanalyzed data from 11 memory tasks previously reported in Mitchell and Bruss (2003). Four well-defined factors emerged, closely resembling episodic and semantic memory and conceptual and perceptual implicit memory, in line with both memory systems and transfer-appropriate processing accounts. To explore taxonomic issues, we ran separate analyses on the implicit tasks. Using a cross-format manipulation (pictures vs. words), we identified 3 prototypical tasks. Word fragment completion and picture fragment identification tasks were "factor pure," tapping perceptual processes uniquely. Category exemplar generation revealed its conceptual nature, yielding both cross-format priming and a picture superiority effect. In contrast, word stem completion and picture naming were more complex, revealing attributes of both processes.

Taxonomic status of two morphotypes of Coryphaena hippurus (Perciformes: Coryphaenidae

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Alan Bonner

2017-03-01

Full Text Available ABSTRACT Two Coryphaena hippurus morphotypes (dourado and palombeta are found along the Brazilian coast and are considered by Rio de Janeiro’s fisherman and fishmongers as two different species. Furthermore, these morphotypes are commercialized under different values and suffer different fishing pressure. Therefore, a definition of their taxonomic status is an important economic and biological matter. In order to investigate this problem, allozyme electrophoresis method was undertaken for seventeen loci on 117 individuals of C. hippurus sampled at Cabo Frio/RJ (Brazil. The data indicate homogeneity between the morphotypes gene pools. Nevertheless, differences were found for genetic variation among dourado and palombeta, especially due to alcohol dehydrogenase locus. Natural selection hypothesis is discussed in explaining these findings.

Camallanus tridentatus (Drasche) (Nematoda: Camallanidae): new taxonomically important morphological data.

Science.gov (United States)

Santos, Cláudia Portes; Moravec, Frantisek

2009-02-01

Camallanus tridentatus is redescribed on the basis of the examination of specimens obtained from the stomach, caeca and intestine of the naturally infected arapaima Arapaima gigas (Schinz) from the Mexiana Island, Amazon River Delta, Brazil. Data on the surface morphology of adults inferred from confocal laser scanning and scanning electron microscopical observations are also provided. The study revealed some taxonomically important, previously unreported morphological features in this species, such as the presence of the poorly sclerotized left spicule and deirids. C. tridentatus distinctly differs from other congeneric species parasitizing freshwater fishes in South America mainly in the structure of the buccal capsule and the female caudal end. C. maculatus Martins, Garcia, Piazza and Ghiraldelli is considered a junior synonymm of Camallanus cotti Fujita.

Camallanus tridentatus (Drasche (Nematoda: Camallanidae: new taxonomically important morphological data

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Cláudia Portes Santos

2009-02-01

Full Text Available Camallanus tridentatus is redescribed on the basis of the examination of specimens obtained from the stomach, caeca and intestine of the naturally infected arapaima Arapaima gigas (Schinz from the Mexiana Island, Amazon River Delta, Brazil. Data on the surface morphology of adults inferred from confocal laser scanning and scanning electron microscopical observations are also provided. The study revealed some taxonomically important, previously unreported morphological features in this species, such as the presence of the poorly sclerotized left spicule and deirids. C. tridentatus distinctly differs from other congeneric species parasitizing freshwater fishes in South America mainly in the structure of the buccal capsule and the female caudal end. C. maculatus Martins, Garcia, Piazza and Ghiraldelli is considered a junior synonymm of Camallanus cotti Fujita.

In the Beginning was the Genome: Genomics and the Bi-textuality of Human Existence.

Science.gov (United States)

Zwart, H A E Hub

2018-04-01

This paper addresses the cultural impact of genomics and the Human Genome Project (HGP) on human self-understanding. Notably, it addresses the claim made by Francis Collins (director of the HGP) that the genome is the language of God and the claim made by Max Delbrück (founding father of molecular life sciences research) that Aristotle must be credited with having predicted DNA as the soul that organises bio-matter. From a continental philosophical perspective I will argue that human existence results from a dialectical interaction between two types of texts: the language of molecular biology and the language of civilisation; the language of the genome and the language of our socio-cultural, symbolic ambiance. Whereas the former ultimately builds on the alphabets of genes and nucleotides, the latter is informed by primordial texts such as the Bible and the Quran. In applied bioethics deliberations on genomics, science is easily framed as liberating and progressive, religious world-views as conservative and restrictive (Zwart 1993). This paper focusses on the broader cultural ambiance of the debate to discern how the bi-textuality of human existence is currently undergoing a transition, as not only the physiological, but also the normative dimension is being reframed in biomolecular and terabyte terms.

True Detective Stories: Media Textuality and the Anthology Format between Remediation and Transmedia Narratives

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Cristina Demaria

2014-12-01

Full Text Available Through the analysis of the recent HBO first season TV series True Detective (2014-, the essays focuses on the renewed anthology format of contemporary seriality as a way to inscribe the form of the novel in the transmedia imagination and its narrative models. While the first part of the essay concentrates on Media and Literary Studies’ debates on the statute of media texts, their materiality and the transformations of their contents in the participatory and convergent culture of prosumers, the second part is devoted to an in-depth reading of some of the main features of True Detective’s first season: from the ways it remediates many other genres and media, to how – as an audiovisual sychretyc text -  it plays with dialogues, cinematography, music and its temporal, spatial and seeing enunciative strategies and positions in order to construct a (quasidystopic narrative of America as an after-image, or, better, a post-collapse America and its Southern Gothic landscapes. In the lst paragraph, this writing briefly engages with how this particular format of TV series helps developing narrative models that fan we bpages and fanfic archives are still struggling not so much to comprehend, but to actually transform into an expanded textuality  able to tell a more ‘true’ story.

Nuevas alfabetizaciones en un entorno multimodal: nuevas necesidades lectoras para un entorno textual múltiple

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Juan Patricio Sánchez-Claros

2016-01-01

Full Text Available The new technologies of information, the development of the media and the massive presence of multimedia devices have brought a renewal of the traditional concept of literacy. Multimodality in the media, in the dissemination of knowledge and the communicat ion formats have brought a change in the system of reception of media objects and each of its integral elements. This multimodal environment is part of the daily life of students who access through a scenario of screens and images across a virtual environm ent in which both textual and visual are integrated as an informational continuum that requires to users new interpretation skills. And, consequently, a new approach to media literacy should be the subject of attention from educators. Media literac y implies the need to address new visual skills, new reading skills and especially new skills for integration and analysis, among those who cannot be set aside on the critical apparatus necessary. This paper discusses the content of these skills, some cri tical tools for multimodal approach speech as well as the role the four substrata of discourse, design, production and distribution , typical ofCritical Analysis of Multimodal Discourse are analysed .

Rethinking Over Textuality of Digital Image: A Methodological Proposal for Pleasant Reading on Digital Screens

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Cristian Álvarez

2009-12-01

Full Text Available It sets out the necessity about thinking over the instructional function of image in digital world under the light of the new opportunities of a methodological proposal to read as a game. First, for this reason it exams the perceptions of García Canclini about the reading of university students, and its problems on the context of new technologies: accumulation of information versus weakening of reflection. To this situation it adds the no appreciation of visual images. Faced with this problematic situation, and with the aim of sketching out options, it analyzes two experiences about books: the “tasty” reading of texts (the “good reading”, and the potentialities presented in the essential characteristics of playing. So, it proposes a methodology shaped for five steps to read images on digital screen. Its aim is seizing the possibilities of “good reading” to expand the comprehension of the visual information perceived through the screen. The proposal puts the accent in the textuality of representational surface of an image. Also it brings the attentive visual route about in order to enable to identify both significant forms and spaces. This proposal is illustrated with examples.

Chemical Weapons Convention

National Research Council Canada - National Science Library

1997-01-01

On April 29, 1997, the Convention on the Prohibition of the Development, Production, Stockpiling, and Use of Chemical Weapons and on Their Destruction, known as the Chemical Weapons Convention (CWC...

Paris Convention on third party liability in the field of nuclear energy and Brussels Convention Supplementary to the Paris Convention

International Nuclear Information System (INIS)

1989-01-01

This new bilingual (English and French) edition of the 1960 Paris Convention and 1963 Brussels Supplementary Convention incorporates the provisions of the Protocols which amended each of them on two occasions, in 1964 and 1982. The Expose des motifs to the Paris Convention, as revised in 1982 is also included in this pubication. (NEA) [fr

Post-Disturbance Stability of Fish Assemblages Measured at Coarse Taxonomic Resolution Masks Change at Finer Scales.

Science.gov (United States)

Ceccarelli, Daniela M; Emslie, Michael J; Richards, Zoe T

2016-01-01

Quantifying changes to coral reef fish assemblages in the wake of cyclonic disturbances is challenging due to spatial variability of damage inherent in such events. Often, fish abundance appears stable at one spatial scale (e.g. reef-wide), but exhibits substantial change at finer scales (e.g. site-specific decline or increase). Taxonomic resolution also plays a role; overall stability at coarse taxonomic levels (e.g. family) may mask species-level turnover. Here we document changes to reef fish communities after severe Tropical Cyclone Ita crossed Lizard Island, Great Barrier Reef. Coral and reef fish surveys were conducted concurrently before and after the cyclone at four levels of exposure to the prevailing weather. Coral cover declined across all exposures except sheltered sites, with the largest decline at exposed sites. There was no significant overall reduction in the total density, biomass and species richness of reef fishes between 2011 and 2015, but individual fish taxa (families and species) changed in complex and unpredictable ways. For example, more families increased in density and biomass than decreased following Cyclone Ita, particularly at exposed sites whilst more fish families declined at lagoon sites even though coral cover did not decline. All sites lost biomass of several damselfish species, and at most sites there was an increase in macroinvertivores and grazers. Overall, these results suggest that the degree of change measured at coarse taxonomic levels masked high species-level turnover, although other potential explanations include that there was no impact of the storm, fish assemblages were impacted but underwent rapid recovery or that there is a time lag before the full impacts become apparent. This study confirms that in high-complexity, high diversity ecosystems such as coral reefs, species level analyses are essential to adequately capture the consequences of disturbance events.

Polyphasic taxonomic analysis establishes Mycobacterium indicus pranii as a distinct species.

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Vikram Saini

Full Text Available BACKGROUND: Mycobacterium indicus pranii (MIP, popularly known as Mw, is a cultivable, non-pathogenic organism, which, based on its growth and metabolic properties, is classified in Runyon Group IV along with M. fortuitum, M. smegmatis and M. vaccae. The novelty of this bacterium was accredited to its immunological ability to undergo antigen driven blast transformation of leukocytes and delayed hypersensitivity skin test in leprosy patients, a disease endemic in the Indian sub-continent. Consequently, MIP has been extensively evaluated for its biochemical and immunological properties leading to its usage as an immunomodulator in leprosy and tuberculosis patients. However, owing to advances in sequencing and culture techniques, the citing of new strains with almost 100% similarity in the sequences of marker genes like 16S rRNA, has compromised the identity of MIP as a novel species. Hence, to define its precise taxonomic position, we have carried out polyphasic taxonomic studies on MIP that integrate its phenotypic, chemotaxonomic and molecular phylogenetic attributes. METHODOLOGY/PRINCIPAL FINDINGS: The comparative analysis of 16S rRNA sequence of MIP by using BLAST algorithm at NCBI (nr database revealed a similarity of > or =99% with M. intracellulare, M. arosiense, M. chimaera, M. seoulense, M. avium subsp. hominissuis, M. avium subsp. paratuberculosis and M. bohemicum. Further analysis with other widely used markers like rpoB and hsp65 could resolve the phylogenetic relationship between MIP and other closely related mycobacteria apart from M. intracellulare and M. chimaera, which shares > or =99% similarity with corresponding MIP orthologues. Molecular phylogenetic analysis, based on the concatenation of candidate orthologues of 16S rRNA, hsp65 and rpoB, also substantiated its distinctiveness from all the related organisms used in the analysis excluding M. intracellulare and M. chimaera with which it exhibited a close proximity. This

Climate change convention

International Nuclear Information System (INIS)

Russell, D.

1992-01-01

Principles that guide Canada's Green Plan with respect to global warming are outlined. These include respect for nature, meeting environmental goals in an economically beneficial manner, efficient use of resources, shared responsibilities, federal leadership, and informed decision making. The policy side of the international Framework Convention on Climate Change is then discussed and related to the Green Plan. The Convention has been signed by 154 nations and has the long-term objective of stabilizing anthropogenic greenhouse gas concentrations in the atmosphere at levels that prevent dangerous interference with the climate system. Some of the Convention's commitments toward achieving that objective are only applicable to the developed countries. Five general areas of commitment are emissions reductions, assistance to developing countries, reporting requirements, scientific and socioeconomic research, and education. The most controversial area is that of limiting emissions. The Convention has strong measures for public accountability and is open to future revisions. Canada's Green Plan represents one country's response to the Convention commitments, including a national goal to stabilize greenhouse gas emissions at the 1990 level by the year 2000

Texto literario y texto fílmico : análisis comparativo-textual de "El invierno en Lisboa, Beltenebros y Plenilunio" de Antonio Muñoz Molina

OpenAIRE

Vázquez Naveira, Marta Maria

2016-01-01

En la tesis Texto literario y texto jilmico. A nálisis comparativo-textual de El invierno en Lisboa, Beltenebros y Plenilunio de Antonio Muñoz Molina analizamos, desde una perspectiva narratológica y filmica, las tres novelas del escritor y sus adaptaciones cinematográficas. El alcance de las relaciones entre cine y literatura es muy amplio y opera en ambas direcciones. En este trabajo se lleva a cabo un estudio comparativo de los textos con el fin de comprobar si mantienen ...

Gram-positive bacteria of marine origin: a numerical taxonomic study on Mediterranean isolates.

Science.gov (United States)

Ortigosa, M; Garay, E; Pujalte, M J

1997-12-01

A numerical taxonomic study was performed on 65 Gram-positive wild strains of heterotrophic, aerobic, marine bacteria, and 9 reference strains. The isolates were obtained from oysters and seawater sampled monthly over one year, by direct plating on Marine Agar. The strains were characterized by 96 morphological, biochemical, physiological and nutritional tests. Clustering yielded 13 phena at 0.62 similarity level (Sl coefficient). Only one of the seven phena containing wild isolates could be identified (Bacillus marinus). A pronounced salt requirement was found in most isolates.

Three reciprocally monophyletic mtDNA lineages elucidate the taxonomic status of Grant's gazelles

DEFF Research Database (Denmark)

Lorenzen, Eline Deidre; Arctander, Peter; Siegismund, Hans Redlef

2008-01-01

are discussed in reference to the four currently recognised subspecies. We suggest Grant's gazelles be raised to the superspecies Nanger (granti) comprising three taxonomic units corresponding to the three mtDNA lineages. There was no evidence of gene flow between the notata and granti lineages, despite...... their geographic proximity, suggesting reproductive isolation. These constitute evolutionary significant units within the adaptive evolutionary framework. Due to its restricted geographic distribution and genetic and morphological distinctiveness, we suggest the petersii lineage be raised to the species Nanger...

Taxonomic Review of the Genus Euodynerus (Hymenoptera: Vespidae: Eumeninae in the Korean Peninsula

Directory of Open Access Journals (Sweden)

Jeong-Kyu Kim

2012-07-01

Full Text Available Korean species of the genus Euodynerus Dalla Torre were taxonomically reviewed. Four species were confirmed: E. trilobus, E. dantici violaceipennis, E. nipanicus nipanicus, and E. quadrifasciatus atripes. The specimens previously identified as E. dantici brachyotomus and E. notatus pubescence form North Korea were re-examined, and corrected to E. dantici violaceipennis and E. nipanicus nipanicus, respectively. Euodynerus quadrifasciatus atripes was re-described for future researchers. After careful reading previous descriptions, Euodynerus seuli Radoszkowski was tentatively supposed to be conspecific with E. nipanicus.

Textual Analysis of General Surgery Residency Personal Statements: Topics and Gender Differences.

Science.gov (United States)

Ostapenko, Laura; Schonhardt-Bailey, Cheryl; Sublette, Jessica Walling; Smink, Douglas S; Osman, Nora Y

2017-10-25

Applicants to US general surgery residency training programs submit standardized applications. Applicants use the personal statement to express their individual rationale for a career in surgery. Our research explores common topics and gender differences within the personal statements of general surgery applicants. We analyzed the electronic residency application service personal statements of 578 applicants (containing 3,82,405 words) from Liaison Committee on Medical Education-accredited medical schools to a single ACGME-accredited general surgery program using an automated textual analysis program to identify common topics and gender differences. Using a recursive algorithm, the program identified common words and clusters, grouping them into topic classes, which are internally validated. We identified and labeled 8 statistically significant topic classes through independent review: "my story," "the art of surgery," "clinical vignettes," "why I love surgery," "residency program characteristics," "working as a team," "academics and research," and "global health and policy." Although some classes were common to all applications, we also identified gender-specific differences. Notably, women were significantly more likely than men to be represented within the class of "working as a team." (p differences between the statements of men and women. Women were more likely to discuss surgery as a team endeavor while men were more likely to focus on the details of their surgical experiences. Our work mirrors what has been found in social psychology research on gender-based differences in how men and women communicate their career goals and aspirations in other competitive professional situations. Copyright © 2017 Association of Program Directors in Surgery. Published by Elsevier Inc. All rights reserved.

Aligning ontologies and integrating textual evidence for pathway analysis of microarray data

Energy Technology Data Exchange (ETDEWEB)

Gopalan, Banu; Posse, Christian; Sanfilippo, Antonio P.; Stenzel-Poore, Mary; Stevens, S.L.; Castano, Jose; Beagley, Nathaniel; Riensche, Roderick M.; Baddeley, Bob; Simon, R.P.; Pustejovsky, James

2006-10-08

Expression arrays are introducing a paradigmatic change in biology by shifting experimental approaches from single gene studies to genome-level analysis, monitoring the ex-pression levels of several thousands of genes in parallel. The massive amounts of data obtained from the microarray data needs to be integrated and interpreted to infer biological meaning within the context of information-rich pathways. In this paper, we present a methodology that integrates textual information with annotations from cross-referenced ontolo-gies to map genes to pathways in a semi-automated way. We illustrate this approach and compare it favorably to other tools by analyzing the gene expression changes underlying the biological phenomena related to stroke. Stroke is the third leading cause of death and a major disabler in the United States. Through years of study, researchers have amassed a significant knowledge base about stroke, and this knowledge, coupled with new technologies, is providing a wealth of new scientific opportunities. The potential for neu-roprotective stroke therapy is enormous. However, the roles of neurogenesis, angiogenesis, and other proliferative re-sponses in the recovery process following ischemia and the molecular mechanisms that lead to these processes still need to be uncovered. Improved annotation of genomic and pro-teomic data, including annotation of pathways in which genes and proteins are involved, is required to facilitate their interpretation and clinical application. While our approach is not aimed at replacing existing curated pathway databases, it reveals multiple hidden relationships that are not evident with the way these databases analyze functional groupings of genes from the Gene Ontology.

ML-Ask: Open Source Affect Analysis Software for Textual Input in Japanese

Directory of Open Access Journals (Sweden)

Michal Ptaszynski

2017-06-01

Full Text Available We present ML-Ask – the first Open Source Affect Analysis system for textual input in Japanese. ML-Ask analyses the contents of an input (e.g., a sentence and annotates it with information regarding the contained general emotive expressions, specific emotional words, valence-activation dimensions of overall expressed affect, and particular emotion types expressed with their respective expressions. ML-Ask also incorporates the Contextual Valence Shifters model for handling negation in sentences to deal with grammatically expressible shifts in the conveyed valence. The system, designed to work mainly under Linux and MacOS, can be used for research on, or applying the techniques of Affect Analysis within the framework Japanese language. It can also be used as an experimental baseline for specific research in Affect Analysis, and as a practical tool for written contents annotation.   Funding statement: This research has been supported by: a Research Grant from the Nissan Science Foundation (years 2009–2010, The GCOE Program founded by Japan’s Ministry of Education, Culture, Sports, Science and Technology (years 2009–2010, (JSPS KAKENHI Grant-in-Aid for JSPS Fellows (Project Number: 22-00358 (years 2010–2012, (JSPS KAKENHI Grant-in-Aid for Scientific Research (Project Number: 24600001 (years 2012–2015, (JSPS KAKENHI Grant-in-Aid for Research Activity Start-up (Project Number: 25880003 (years 2013–2015, and (JSPS KAKENHI Grant-in-Aid for Encouragement of Young Scientists (B (Project Number: 15K16044 (years 2015-present, project estimated to end in March 2018.

Effects of land use on taxonomic and functional diversity

DEFF Research Database (Denmark)

Hevia, Violeta; Carmona, Carlos P.; Azcárate, Francisco M.

2016-01-01

Land-use change is the major driver of biodiversity loss. However, taxonomic diversity (TD) and functional diversity (FD) might respond differently to land-use change, and this response might also vary depending on the biotic group being analysed. In this study, we compare the TD and FD of four......: the sampling unit scale and the site scale. Land-use intensity effects on TD and FD were quite different and highly varied among the four biotic groups, with no single clear pattern emerging that could be considered general for all organisms. Additive partitioning of species diversity revealed clear...... contrasting patterns between TD and FD in the percentage of variability observed at each spatial scale. While most variability in TD was found at the larger scales, irregardless of organism group and land-use type, most variability in FD was found at the smallest scale, indicating that species turnover among...

The Hague Judgments Convention

DEFF Research Database (Denmark)

Nielsen, Peter Arnt

2011-01-01

The Hague Judgments Convention of 2005 is the first global convention on international jurisdiction and recognition and enforcement of judgments in civil and commercial matters. The author explains the political and legal background of the Convention, its content and certain crucial issues during...

Sistema de ejercicios didácticos para desarrollar la comprensión textual en los estudiantes de séptimo grado

Directory of Open Access Journals (Sweden)

Kendra Carballo Téllez

2017-11-01

Full Text Available Este artículo recoge los aspectos más relevantes de un tema actual en la práctica educativa cubana, el tratamiento didáctico a los indicadores para el desarrollo de una competencia cognitiva-comunicativa y sociocultural en la secundaria básica. Aporta un sistema de ejercicios didácticos para el desarrollo de la prensión lectora desde un enfoque cognitivo, comunicativo y sociocultural. Se toman como referentes, importantes definiciones, teorías esenciales y el algoritmo sugerido para la comprensión textual. El sistema de ejercicios didácticos propuesto contiene una fundamentación detallada, se ajusta a los requerimientos metodológicos de elaboración de este tipo de documento.

The apicoplast genomes of two taxonomic units of Babesia from sheep.

Science.gov (United States)

Wang, Tao; Guan, Guiquan; Korhonen, Pasi K; Koehler, Anson V; Hall, Ross S; Young, Neil D; Yin, Hong; Gasser, Robin B

2017-01-15

The apicoplast (ap) is a unique, non-photosynthetic organelle found in most apicomplexan parasites. Due to the essential roles that this organelle has, it has been widely considered as target for drugs against diseases caused by apicomplexans. Exploring the ap genomes of such parasites would provide a better understanding of their systematics and their basic molecular biology for therapeutics. However, there is limited information available on the ap genomes of apicomplexan parasites. In the present study, the ap genomes of two operational taxonomic units of Babesia (known as Babesia sp. Lintan [Bl] and Babesia sp. Xinjiang [Bx]) from sheep were sequenced, assembled and annotated using a massive parallel sequencing-based approach. Then, the gene content and gene order in these ap genomes (∼30.7kb in size) were defined and compared, and the genetic differences were assessed. In addition, a phylogenetic analysis of ap genomic data sets was carried out to assess the relationships of these taxonomic units with other apicomplexan parasites for which complete ap genomic data sets were publicly available. The results showed that the ap genomes of Bl and Bx encode 59 and 57 genes, respectively, including 2 ribosomal RNA genes, 25 transfer RNA genes and 30-32 protein-encoding genes, being similar in content to those of Babesia bovis and B. orientalis. Ap gene regions that might serve as markers for future epidemiological and population genetic studies of Babesia species were identified. Using sequence data for a subset of six protein-encoding genes, a close relationship of Bl and Bx with Babesia bovis from cattle and B. orientalis from water buffalo was inferred. Although the focus of the present study was on Babesia, we propose that the present sequencing-bioinformatic approach should be applicable to organellar genomes of a wide range of apicomplexans of veterinary importance. Copyright © 2016 Elsevier B.V. All rights reserved.

The Aarhus Convention: A new regional convention on citizens' environmental rights

International Nuclear Information System (INIS)

Wates, J.

2000-01-01

The UN ECE Convention on Access to Information, Public Participation in Decision-making and Access to Justice in Environmental Matters had been adopted at Arhus, Denmark, at the Fourth Ministerial Conference in the 'Environment for Europe' process, and signed by thirty-five countries and the European Community. This paper summarises the main features of the Convention and briefly discusses its relevance to radioactive waste management issues. It then describes some of the activities currently being undertaken under the auspices of the Convention. (author)

EXPERIENCIAS SIGNIFICATIVAS DE INTEGRACIÓN SOCIAL DE UNIVERSITARIOS MEDIANTE LA PRODUCCIÓN TEXTUAL DE RAP I SIGNIFICANT EXPERIENCES OF SOCIAL INTEGRATION OF UNIVERSITY STUDENTS BY TEXTUAL PRODUCTION OF RAP

Directory of Open Access Journals (Sweden)

Adriana María Pérez Cedeño

2018-04-01

Full Text Available Universities are beginning to promote policies aimed at eliminating discrimination, promoting spaces for community, social and educational participation. Therefore, the incorporation of college students to their academic discourse community is encouraged, since they are young people with a particular history and complex social life, which are included in different ways into the educational system. The overall purpose is to assess the intercultural resource "rap" in the academic practice of textual compositions by new students in the Extensión Región Centro- Sur of the Universidad de Oriente. In this qualitative research, the content analysis is used to account for the experiences of eight key informants interviewed, students of Industrial Engineering or Systems Engineering. It is intended to understand the reasons for the behavior of these students, analyzing both the thematic as the overall quality of writing, the reality in which they arise, and how they express their living experiences. The findings indicate that, despite the difficulties in the writing of texts: a students, in addition to reporting, are identified with this musical style, because its main purpose lies in provoking reactions, b the strategy allows to cater a heterogeneous population academically and culturally, c university students may recognize, as any artistic expression, musical text resulting from this interpretation, which has a social impact in a given group of persons. This strategy provides an opportunity to reflect on the process of integral development and deepens in the construction of a new model of society

Seed morphology and its taxonomic significance in the family malvaceae

International Nuclear Information System (INIS)

Abid, R.; Ather, A.

2016-01-01

The seed morphological studies of 75 taxa belonging to 6 sub-families of the family Malvaceae were carried out from Pakistan. In Pakistan the family Malvaceae is represented by 6 sub-families viz., Byttnerioideae, Dombeyoideae, Malvoideae, Bombacoideae, Helicteroideae and Sterculioideae. The seed macro and micro morphological characters are examined, using light (LM) and scanning electron microscopy (SEM). Detailed seed morphological descriptions, micrographs and keys based on seed characters are also provided. A variety in various quantitative and qualitative seed characters was observed. The micro-morphological characters of seeds are quite significant to strengthen the taxonomic decisions within the family Malvaceae at various levels. The data obtained from the seed morphological characters were analyzed numerically to trace out the phylogenetic affinities for the taxa within the family Malvaceae from Pakistan. (author)

Legal Translation Dictionaries for Learners

DEFF Research Database (Denmark)

Nielsen, Sandro

2010-01-01

in conditional clauses. When translating into languages not allowing such structures, for instance, English and French, learners need their legal translation dictionaries to help them with both the legal terms and the syntactic structures. The uses of textual conventions that characterise the legal genre vary....... Lexicographers should therefore design their dictionaries so that they contain intra-lingual or contrastive descriptions of the relevant genre conventions. As illustrated in Nielsen (2000) whether the best solution is to retain the genre conventions found in the SL text or to adopt the conventions used in TL...

The Interdisciplinarity in the Students' Questions in Science Classes of the Elementary School: Contributions of Discursive Textual Analysis

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Maurivan Güntzel Ramos

2017-12-01

Full Text Available The article presents the analysis of 342 questions on the theme "Water", proposed by 114 students from three elementary schools in the South region of Brazil, in order to identify interdisciplinary articulations associated with complex thinking present in these questions. The research sought to answer the following question: What revelations can emerge from the analysis of student's questions about a specific topic of study, such as "Water", in relation to interdisciplinarity and complex thinking? From the discursive textual analysis of the questions, two categories emerged: disciplinary questions; and interdisciplinary questions. The examination of the content of the categories enabled the writing of metatexts that reveal that in the text of most of the students' questions, is present a complex mode of thinking and interdisciplinary relationships, since 77.8% of the questions belong to second category. This can be an indication to teachers of how to initiate pedagogical actions, whose focus is interdisciplinarity.

Review of the cyanobacterial genera implaying planktic species after recent taxonomic revisions according to polyphasic methods: state as of 2014.

Czech Academy of Sciences Publication Activity Database

Komárek, Jiří

2016-01-01

Roč. 764, č. 1 (2016), s. 259-270 ISSN 0018-8158 Institutional support: RVO:67985939 Keywords : cyanobacteria * plankton * taxonomic revisions Subject RIV: EH - Ecology, Behaviour Impact factor: 2.056, year: 2016

The Perilous Life of a Linguistic Genre Convention

DEFF Research Database (Denmark)

Borchmann, Simon

2014-01-01

, the descriptions are more informative than the structures hitherto described by text linguistics. Secondly, as historical norms, they are a testimony to the development and change of language use. Thirdly, the descriptions contribute to language users’ awareness of the origin of standards, their understanding......The primary, theoretical aim of the article is to present a linguistic text analysis that differs from standard text linguistic approaches by being informative with regard to the linguistic choices and textual organisation that characterise a text as a social act. The analysis is exemplified...... by using texts of a relatively new Danish journalistic genre nyhedsanalyse (news analysis). The secondary, empirical aim of the article is to present a corpus-based, linguistic analysis of central elements of the genre nyhedsanalyse within the Danish system of newspaper genres. Text linguistics is based...

Pursuing the quest for better understanding the taxonomic distribution of the system of doubly uniparental inheritance of mtDNA

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Arthur Gusman

2016-12-01

Full Text Available There is only one exception to strict maternal inheritance of mitochondrial DNA (mtDNA in the animal kingdom: a system named doubly uniparental inheritance (DUI, which is found in several bivalve species. Why and how such a radically different system of mitochondrial transmission evolved in bivalve remains obscure. Obtaining a more complete taxonomic distribution of DUI in the Bivalvia may help to better understand its origin and function. In this study we provide evidence for the presence of sex-linked heteroplasmy (thus the possible presence of DUI in two bivalve species, i.e., the nuculanoid Yoldia hyperborea(Gould, 1841and the veneroid Scrobicularia plana(Da Costa,1778, increasing the number of families in which DUI has been found by two. An update on the taxonomic distribution of DUI in the Bivalvia is also presented.

Critical Taxonomic Appraisal of Some Taxa of Pedicularis from Indian Himalayas Belonging to Section Siphonanthae

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Arti Garg

2009-06-01

Full Text Available The existing confusion on the taxonomic status of five taxa of Pedicularis viz. P. punctata Decne, P. siphonantha D. Don, P. hookeriana Wall. ex Benth., P. megalantha D. Don and P. hoffmeisteri Kl. ex Kl. & Garcke is resolved on the basis of critical morphological study. These taxa belong to section Siphonanthae, subgenus Longirostres. Pennell’s view of segregating these taxa into distinct species is defended and upheld.

Elaiophores: their taxonomic distribution, morphology and functions

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Clivia Carolina Fiorilo Possobom

Full Text Available ABSTRACT Elaiophores are floral glands that secrete non-volatile oils as a reward for their pollinators. Their secretions mediate a specialized interaction between oil-producing plants and a few species of oil-collecting bees - Apidae and Melittidae. The present review focuses on the morphological and functional aspects of these secretory structures. We also provide information on their chemistry and pollination ecology. Our survey is organized taxonomically among the plant families for which elaiophore occurrence has been confirmed -for the monocots, Iridaceae and Orchidaceae, and for the eudicots, Calceolariaceae, Cucurbitaceae, Krameriaceae, Malpighiaceae, Plantaginaceae, Primulaceae, Scrophulariaceae, Solanaceae and Stilbaceae. Most oil flowers are zygomorphic, bisexual, nectarless and present their elaiophores on the protective whorls or on the androecium. Trichomal elaiophores are reported in all of these families except Krameriaceae and Malpighiaceae, and they vary in the density and morphology of the trichomes. Epithelial elaiophores occur in some monocot representatives and in Krameriaceae and Malpighiaceae, and are similar among species. An intermediate type of elaiophore is reported in some species of Orchidaceae. Regardless of elaiophore type, these glands have similar subcellular features and secretion-release mechanisms. Finally, we note the dearth of information on elaiophore ultrastructure and functioning for several plant families.

Pollen morphology of some asiatic species of genus salsola (chenopodiaceae) and its taxonomic relationships

International Nuclear Information System (INIS)

Toderich, K.N.; Shuyskaya, E.V.; Ozturk, M

2010-01-01

Comparative studies on the pollen grain morphology of 27 Asiatic species of the genus Salsola were conducted by using scanning electron microscope (SEM analysis) in order to assess the taxonomic value of pollen traits. The pollen are radially symmetrical isopolar, pantopolyporate, spherical or subspheroid. The pollen characters like size, pore number, chord (C/D ratio), pore diameter, exine thickness, level of sinking of pore, convexness of mesoporial exine, spinule and minute-hole densities and number of spines on pore membrane appeared to be useful characters in distinguishing the species. Interesting intraspecific variations in pollen grain morphology were recorded for the C/D ratio. This parameter is highly specific, supporting the delimitation of Salsola species, and appears to be more conservative than some flower and fruit characters. The numerical value of form index comprising the ratio between the length of polar axis and diameter (P/E) also was an informative trait for delimitation of the species investigated here. Three pollen types were recognized. Euclidean distance was used to compute the dissimilarity matrix and a cladogram prepared. The quantitative characters of pollen morphology allowed clustering of groups and ordination analyses of species from different sections/subsections within genus Salsola. These features indicated that overall pollen traits reflect the current taxonomic boundaries, except for the Salsola species allocated to Climacoptera and Halothamnus, which should be accepted as separate genera. (author)

Taxonomic Characterization of Honey Bee (Apis mellifera) Pollen Foraging Based on Non-Overlapping Paired-End Sequencing of Nuclear Ribosomal Loci.

Science.gov (United States)

Cornman, R Scott; Otto, Clint R V; Iwanowicz, Deborah; Pettis, Jeffery S

2015-01-01

Identifying plant taxa that honey bees (Apis mellifera) forage upon is of great apicultural interest, but traditional methods are labor intensive and may lack resolution. Here we evaluate a high-throughput genetic barcoding approach to characterize trap-collected pollen from multiple North Dakota apiaries across multiple years. We used the Illumina MiSeq platform to generate sequence scaffolds from non-overlapping 300-bp paired-end sequencing reads of the ribosomal internal transcribed spacers (ITS). Full-length sequence scaffolds represented ~530 bp of ITS sequence after adapter trimming, drawn from the 5' of ITS1 and the 3' of ITS2, while skipping the uninformative 5.8S region. Operational taxonomic units (OTUs) were picked from scaffolds clustered at 97% identity, searched by BLAST against the nt database, and given taxonomic assignments using the paired-read lowest common ancestor approach. Taxonomic assignments and quantitative patterns were consistent with known plant distributions, phenology, and observational reports of pollen foraging, but revealed an unexpected contribution from non-crop graminoids and wetland plants. The mean number of plant species assignments per sample was 23.0 (+/- 5.5) and the mean species diversity (effective number of equally abundant species) was 3.3 (+/- 1.2). Bray-Curtis similarities showed good agreement among samples from the same apiary and sampling date. Rarefaction plots indicated that fewer than 50,000 reads are typically needed to characterize pollen samples of this complexity. Our results show that a pre-compiled, curated reference database is not essential for genus-level assignments, but species-level assignments are hindered by database gaps, reference length variation, and probable errors in the taxonomic assignment, requiring post-hoc evaluation. Although the effective per-sample yield achieved using custom MiSeq amplicon primers was less than the machine maximum, primarily due to lower "read2" quality, further

From GenBank to GBIF: Phylogeny-Based Predictive Niche Modeling Tests Accuracy of Taxonomic Identifications in Large Occurrence Data Repositories.

Science.gov (United States)

Smith, B Eugene; Johnston, Mark K; Lücking, Robert

2016-01-01

Accuracy of taxonomic identifications is crucial to data quality in online repositories of species occurrence data, such as the Global Biodiversity Information Facility (GBIF), which have accumulated several hundred million records over the past 15 years. These data serve as basis for large scale analyses of macroecological and biogeographic patterns and to document environmental changes over time. However, taxonomic identifications are often unreliable, especially for non-vascular plants and fungi including lichens, which may lack critical revisions of voucher specimens. Due to the scale of the problem, restudy of millions of collections is unrealistic and other strategies are needed. Here we propose to use verified, georeferenced occurrence data of a given species to apply predictive niche modeling that can then be used to evaluate unverified occurrences of that species. Selecting the charismatic lichen fungus, Usnea longissima, as a case study, we used georeferenced occurrence records based on sequenced specimens to model its predicted niche. Our results suggest that the target species is largely restricted to a narrow range of boreal and temperate forest in the Northern Hemisphere and that occurrence records in GBIF from tropical regions and the Southern Hemisphere do not represent this taxon, a prediction tested by comparison with taxonomic revisions of Usnea for these regions. As a novel approach, we employed Principal Component Analysis on the environmental grid data used for predictive modeling to visualize potential ecogeographical barriers for the target species; we found that tropical regions conform a strong barrier, explaining why potential niches in the Southern Hemisphere were not colonized by Usnea longissima and instead by morphologically similar species. This approach is an example of how data from two of the most important biodiversity repositories, GenBank and GBIF, can be effectively combined to remotely address the problem of inaccuracy of

Taxonomic and geographic novelties in the genus Plantago (Plantaginaceae) in Chile, including the description of a new species

DEFF Research Database (Denmark)

Hassemer, Gustavo; Shipunov, Alexey; Rønsted, Nina

2018-01-01

We present taxonomic and geographic novelties in the genus Plantago from Chile. More specifically, we describe P. nebularis, a new species endemic to Cerro Moreno, Antofagasta region, and propose P. zoellneriana, a new name for P. sericea subsp. araucana. We also lectotypify the name P. sericea, ...

Polyphasic taxonomic approach in the description of Alishewanella fetalis gen. nov., sp nov., isolated from a human foetus

DEFF Research Database (Denmark)

Vogel, Birte Fonnesbech; Venkateswaran, K.; Christensen, H.

2000-01-01

A taxonomically unique bacterium is described on the basis of a physiological and biochemical characterization, fatty acid profiling and sequence analyses of 16S rRNA and gyrase B (gyrB) genes. This non-motile, non-fermentative bacterium was isolated from a human foetus in Uppsala, Sweden...

Are Epiphytic Microbial Communities in the Carposphere of Ripening Grape Clusters (Vitis vinifera L.) Different between Conventional, Organic, and Biodynamic Grapes?

Science.gov (United States)

Kecskeméti, Elizabeth; Berkelmann-Löhnertz, Beate; Reineke, Annette

2016-01-01

Using barcoded pyrosequencing fungal and bacterial communities associated with grape berry clusters (Vitis vinifera L.) obtained from conventional, organic and biodynamic vineyard plots were investigated in two subsequent years at different stages during berry ripening. The four most abundant operational taxonomic units (OTUs) based on fungal ITS data were Botrytis cinerea, Cladosporium spp., Aureobasidium pullulans and Alternaria alternata which represented 57% and 47% of the total reads in 2010 and 2011, respectively. Members of the genera Sphingomonas, Gluconobacter, Pseudomonas, Erwinia, and Massilia constituted 67% of the total number of bacterial 16S DNA reads in 2010 samples and 78% in 2011 samples. Viticultural management system had no significant effect on abundance of fungi or bacteria in both years and at all three sampling dates. Exceptions were A. alternata and Pseudomonas spp. which were more abundant in the carposphere of conventional compared to biodynamic berries, as well as Sphingomonas spp. which was significantly less abundant on conventional compared to organic berries at an early ripening stage in 2011. In general, there were no significant differences in fungal and bacterial diversity indices or richness evident between management systems. No distinct fungal or bacterial communities were associated with the different maturation stages or management systems, respectively. An exception was the last stage of berry maturation in 2011, where the Simpson diversity index was significantly higher for fungal communities on biodynamic compared to conventional grapes. Our study highlights the existence of complex and dynamic microbial communities in the grape cluster carposphere including both phytopathogenic and potentially antagonistic microorganisms that can have a significant impact on grape production. Such knowledge is particularly relevant for development, selection and application of effective control measures against economically important

XML schemas and mark-up practices of taxonomic literature.

Science.gov (United States)

Penev, Lyubomir; Lyal, Christopher Hc; Weitzman, Anna; Morse, David R; King, David; Sautter, Guido; Georgiev, Teodor; Morris, Robert A; Catapano, Terry; Agosti, Donat

2011-01-01

We review the three most widely used XML schemas used to mark-up taxonomic texts, TaxonX, TaxPub and taXMLit. These are described from the viewpoint of their development history, current status, implementation, and use cases. The concept of "taxon treatment" from the viewpoint of taxonomy mark-up into XML is discussed. TaxonX and taXMLit are primarily designed for legacy literature, the former being more lightweight and with a focus on recovery of taxon treatments, the latter providing a much more detailed set of tags to facilitate data extraction and analysis. TaxPub is an extension of the National Library of Medicine Document Type Definition (NLM DTD) for taxonomy focussed on layout and recovery and, as such, is best suited for mark-up of new publications and their archiving in PubMedCentral. All three schemas have their advantages and shortcomings and can be used for different purposes.

Didactic implications of the history of science in Physics Education: a literature review through discursive textual analysis

Directory of Open Access Journals (Sweden)

Edmundo Rodrigues Junior

2015-10-01

Full Text Available This work presents a literature review of the educational implications of the history of science in the teaching of Physics in the period 2010 to 2014. The technique used to analyze the data was the discursive textual analysis with the categories defined a priori. These categories include different teaching strategies for the teaching of history of science in Physics classes such as the use of primary or original sources, historical case studies, science through drama activities, historical experiments, biographies and /or autobiographies of scientists and the content analysis of the history of science present in textbooks. The result showed that 36 articles of 1659 available in journals use these teaching strategies. The results of the interpretative step consisted in the production of six metatexts in which two learning objectives were identified: the first one is related to physical concepts and the second one in aspects related to understanding the Nature of Science. The evaluation tools used by the authors to assess the students’ knowledge were identified in our corpus too.

A taxonomic review of the dry-fruited species of Anemone (Ranunculaceae in southern Africa

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J. C. Manning

2013-01-01

Full Text Available The three dry-fruited species of Anemone sect. Pulsatilloides subsect. Alchemillifoliae (Ranunculaceae from southern Africa are reviewed, with full descriptions and nomenclature, including complete synonomy, taxonomic history with nomenclatural corrections, ecological notes, and distribution. A. tenuifolia (L.f. DC. from the Cape Floristic Region is segregated as ser. Pinnatifoliae from the two summer rainfall species, A. caffra (Eckl. & Zeyh. Harv. and A. fanninnii Harv. ex Masters, which remain in ser. Alchemillifoliae, emphasising the strong vegetative differences between the two series.

Colombian coca plants. A critical discussion on taxonomic aspects of cultivated Erythroxylum species (Erythroxylaceae)

International Nuclear Information System (INIS)

Galindo Bonilla, Aida; Fernandez Alonzo, Jose Luis

2010-01-01

Forensic botany is in high demand in Colombia in connection with plant material, mainly coca from illicit crops. The taxonomic study of the two species and four varieties of Erythroxylum P. Browne (Erythroxylaceae) cultivated in Colombia was carried out. Hybridization between E. coca and E. novogranatense and between the two varieties of E. coca is suggested, and important changes in the geographic distribution of all taxa are described. Both, hybridization and changes in distribution patterns are due to anthropic intervention.

Towards Utilization of Neurofuzzy Systems for Taxonomic Identification Using Psittacines as a Case Study

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Shahram Rahimi

2016-01-01

Full Text Available Demonstration of the neurofuzzy application to the task of psittacine (parrot taxonomic identification is presented in this paper. In this work, NEFCLASS-J neurofuzzy system is utilized for classification of parrot data for 141 and 183 groupings, using 68 feature points or qualities. The reported results display classification accuracies of above 95%, which is strongly tied to the setting of certain parameters of the neurofuzzy system. Rule base sizes were in the range of 1,750 to 1,950 rules.

Taxonomic study of Festuca L. subgenus Schedonorus (P. Beauv. Peterm. in Iran

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Sayed Zabihollah Hosseini

2013-11-01

Full Text Available This study was based upon a taxonomic review of the subgenus Schedonorus in Iran. A collection of 30 specimens belonging to the herbaria: W, B and HUI (herbarium of the University of Isfahan were studied. Based on the results of this study, this subgenus included three species: Festuca arundinacea, F. gigantea and F. pratensis in Iran. Furthermore, this study showed that F. arundinacea, occured in this country with two subspecies: orientalis (Hack. Tzvelev and fenas (Lag. Arcang. with the greatest area of distribution compared to the other two species. Our examination of the type specimen of F. elatior subsp. pratensis var. elbursiana confirmed its synonymy with F. arundinacea.

O herói na forma e no conteúdo: análise textual do Mangá Dragon Ball e Dragon Ball Z.

OpenAIRE

Silva, André Luiz Souza da

2006-01-01

A presente dissertação, intitulada O herói na forma e no conteúdo: análise textual do mangá Dragon Ball e Dragon Ball Z, objetiva averiguar os aspectos narrativos que compõem o mangá ao longo dessa série, verificando o papel do herói e a sua relação com os demais personagens. Para isso, a investigação analisa os aspectos plásticos do herói no contexto da economia narrativa geral dos quadrinhos. O objetivo é ponderar e realçar certos aspectos de ordem morfológica e das ações narrativas entre o...

The friends that game together: A folkloric expansion of textual poaching to genre farming for socialization in tabletop role-playing games

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Michael Robert Underwood

2009-03-01

Full Text Available Tabletop role-playing games (RPGs are a folkloric form for creating and reaffirming community bonds and performing identity. Gaming is used to communicate and perform cultural capital and identity through fictional narratives, functioning as a form of community building and/or personal expression. With quotations from ethnographic research over the course of 2 years, including interviews with several groups of gamers and participant observation, I examine the ways that players create and affirm social bonds. I return to Michel De Certeau's idea of textual poaching, as adapted by Henry Jenkins, to contrast with it a new concept of genre farming. As both platform for and object of genre farming, RPGs allow players to display cultural competence, create and reaffirm social ties, and seek entertainment in a collaborative fashion.

Coherence in the Argumentative Essays of First Year College of Liberal Arts Students at De La Salle University

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Alphie G. Garing

2013-12-01

Full Text Available The study investigates five textual features of coherence in the students’ argumentative essays for text comprehensibility and overall writing quality. Specifically, it examines how comprehensible the students’ argumentative essays considering the following: focus, organization, cohesion, support and elaboration, and conventions; and the relationship between the textual features and the comprehensibility of the students’ argumentative essays. The data consists of 13 argumentative essays written in ENGLCOM class first year College of Liberal Arts students of De La Salle University. Two techniques were used to analyze the data. First, an analytic and holistic scorings using a four-point writing rubric were used to evaluate each of the textual features of coherence and comprehensibility, respectively. Second, correlation analysis was performed to determine the relationship between the coherence features and the comprehensibility of the students’ texts and between the comprehensibility of the students’ argumentative essays.

Worldwide Analysis of Sedimentary DNA Reveals Major Gaps in Taxonomic Knowledge of Deep-Sea Benthos

DEFF Research Database (Denmark)

Sinniger, Frédéric; Pawlowski, Jan; Harii, Saki

2016-01-01

in 39 deep-sea sediment samples from bathyal and abyssal depths worldwide. The eDNA dataset was dominated by meiobenthic taxa and we identified all animal phyla commonly found in the deep-sea benthos; yet, the diversity within these phyla remains largely unknown. The large numbers of taxonomically...... for pure and applied deep-sea environmental research but also emphasizes the necessity to integrate such new approaches with traditional morphology-based examination of deep-sea organisms....

The taxonomic identity of Heliconius melpomene f. pyritosa var. fumigata Zikán (Lepidoptera: Nymphalidae

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André Victor Lucci Freitas

2015-06-01

Full Text Available The taxonomic identity of the butterfly Heliconius melpomene f. pyritosa var. fumigata Zikán, 1937 (Nymphalidae: Heliconiinae is discussed based on the discovery of the specimen based on which this name was assigned. The specimen is not a variation of Eueides tales surdus Stichel, 1903, as previously stated, but is in fact a variation of H. melpomene f. pyritosa, which is a synonym of Heliconius erato amalfreda Riffarth, 1901.

Comparison of Sewage and Animal Fecal Microbiomes by using Oligotyping Reveals Potential Human Fecal Indicators in Multiple Taxonomic Groups

Science.gov (United States)

Most DNA-based microbial source tracking (MST) approaches target host-associated organisms within the order Bacteroidales, but human and other animal gut microbiota contain an array of other taxonomic groups that might serve as indicators for sources of fecal pollution. High thr...

Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK

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R. Henrik Nilsson

2018-01-01

Full Text Available Recent DNA-based studies have shown that the built environment is surprisingly rich in fungi. These indoor fungi – whether transient visitors or more persistent residents – may hold clues to the rising levels of human allergies and other medical and building-related health problems observed globally. The taxonomic identity of these fungi is crucial in such pursuits. Molecular identification of the built mycobiome is no trivial undertaking, however, given the large number of unidentified, misidentified, and technically compromised fungal sequences in public sequence databases. In addition, the sequence metadata required to make informed taxonomic decisions – such as country and host/substrate of collection – are often lacking even from reference and ex-type sequences. Here we report on a taxonomic annotation workshop (April 10–11, 2017 organized at the James Hutton Institute/University of Aberdeen (UK to facilitate reproducible studies of the built mycobiome. The 32 participants went through public fungal ITS barcode sequences related to the built mycobiome for taxonomic and nomenclatural correctness, technical quality, and metadata availability. A total of 19,508 changes – including 4,783 name changes, 14,121 metadata annotations, and the removal of 99 technically compromised sequences – were implemented in the UNITE database for molecular identification of fungi (https://unite.ut.ee/ and shared with a range of other databases and downstream resources. Among the genera that saw the largest number of changes were Penicillium, Talaromyces, Cladosporium, Acremonium, and Alternaria, all of them of significant importance in both culture-based and culture-independent surveys of the built environment.

Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK)

Science.gov (United States)

Nilsson, R. Henrik; Taylor, Andy F. S.; Adams, Rachel I.; Baschien, Christiane; Johan Bengtsson-Palme; Cangren, Patrik; Coleine, Claudia; Heide-Marie Daniel; Glassman, Sydney I.; Hirooka, Yuuri; Irinyi, Laszlo; Reda Iršėnaitė; Pedro M. Martin-Sanchez; Meyer, Wieland; Seung-Yoon Oh; Jose Paulo Sampaio; Seifert, Keith A.; Sklenář, Frantisek; Dirk Stubbe; Suh, Sung-Oui; Summerbell, Richard; Svantesson, Sten; Martin Unterseher; Cobus M. Visagie; Weiss, Michael; Woudenberg, Joyce HC; Christian Wurzbacher; den Wyngaert, Silke Van; Yilmaz, Neriman; Andrey Yurkov; Kõljalg, Urmas; Abarenkov, Kessy

2018-01-01

Abstract Recent DNA-based studies have shown that the built environment is surprisingly rich in fungi. These indoor fungi – whether transient visitors or more persistent residents – may hold clues to the rising levels of human allergies and other medical and building-related health problems observed globally. The taxonomic identity of these fungi is crucial in such pursuits. Molecular identification of the built mycobiome is no trivial undertaking, however, given the large number of unidentified, misidentified, and technically compromised fungal sequences in public sequence databases. In addition, the sequence metadata required to make informed taxonomic decisions – such as country and host/substrate of collection – are often lacking even from reference and ex-type sequences. Here we report on a taxonomic annotation workshop (April 10–11, 2017) organized at the James Hutton Institute/University of Aberdeen (UK) to facilitate reproducible studies of the built mycobiome. The 32 participants went through public fungal ITS barcode sequences related to the built mycobiome for taxonomic and nomenclatural correctness, technical quality, and metadata availability. A total of 19,508 changes – including 4,783 name changes, 14,121 metadata annotations, and the removal of 99 technically compromised sequences – were implemented in the UNITE database for molecular identification of fungi (https://unite.ut.ee/) and shared with a range of other databases and downstream resources. Among the genera that saw the largest number of changes were Penicillium, Talaromyces, Cladosporium, Acremonium, and Alternaria, all of them of significant importance in both culture-based and culture-independent surveys of the built environment. PMID:29559822

Epidermal characters of Tamarix L. (Tamaricaceae from Northwest China and their taxonomic and palaeogeographic implications

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Jian-Wei Zhang

2018-04-01

Full Text Available The taxonomical position of species of the genus Tamarix (Tamaricaceae has been criticized because of their gross morphological similarities (such as slender, smooth and reddish–brown branches, grey–green foliage and scale leaves, and their systematic relationships remain unclear. In this paper, the leaf epidermal features of 17 species from China are studied based on the micro-morphological characters of the epidermal cells, stomata, salt glands, papillae and epidermal hairs. According to the studies, the leaf epidermal features, together with the character of the flower, are taxonomically clearly distinct. The establishment of Tamarix albiflonum is consolidated. Tamarix korolkowi and Tamarix ramosissima have minimal differences in epidermal characters, and the former is suggested to be a junior synonym. Tamarix ramosissima, Tamarix tarimensis, Tamarix arceuthoides and Tamarix hohenackeri are most similar with respect to their leaf epidermis; considering the common morphological features, habit, distribution and especially the hybridization, it is suggested that these four species are closely genetically related and that the variations among them are probably intraspecific. The new taxonomical evidence indicates the occurrence of 13 species and four variants in China. Presently, Tamarix is a typical plant of arid and semi-arid regions, but its Eocene ancestors lived in warm and humid climates in the coastal areas of the ancient Mediterranean Sea. Thus, the papillae or epidermal hairs, which are outgrowths of the outer epidermal cells facilitating the leaf to respond to water stress and commonly seen in the plants growing in arid or semi-arid areas rather than the plants in warm and humid climates, are of relatively recent origin in Tamarix. The primitive species lack papillae or epidermal hairs, while in evolved species these structures are abundant. Based on the ecological adaptations of the epidermal features, the palaeogeographic

prepare_taxa_charts.py: A Python program to automate generation of publication ready taxonomic pie chart images from QIIME.

Science.gov (United States)

Lakhujani, Vijay; Badapanda, Chandan

2017-06-01

QIIME (Quantitative Insights Into Microbial Ecology) is one of the most popular open-source bioinformatics suite for performing metagenome, 16S rRNA amplicon and Internal Transcribed Spacer (ITS) data analysis. Although, it is very comprehensive and powerful tool, it lacks a method to provide publication ready taxonomic pie charts. The script plot_taxa_summary . py bundled with QIIME generate a html file and a folder containing taxonomic pie chart and legend as separate images. The images have randomly generated alphanumeric names. Therefore, it is difficult to associate the pie chart with the legend and the corresponding sample identifier. Even if the option to have the legend within the html file is selected while executing plot_taxa_summary . py , it is very tedious to crop a complete image (having both the pie chart and the legend) due to unequal image sizes. It requires a lot of time to manually prepare the pie charts for multiple samples for publication purpose. Moreover, there are chances of error while identifying the pie chart and legend pair due to random alphanumeric names of the images. To bypass all these bottlenecks and make this process efficient, we have developed a python based program, prepare_taxa_charts . py , to automate the renaming, cropping and merging of taxonomic pie chart and corresponding legend image into a single, good quality publication ready image. This program not only augments the functionality of plot_taxa_summary . py but is also very fast in terms of CPU time and user friendly.

Loveridge’s Angolan geckos, Afroedura karroica bogerti and Pachydactylus scutatus angolensis (Sauria, Gekkonidae: new distribution records, comments on type localities and taxonomic status

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William R. Branch

2017-03-01

Full Text Available In 1944 Loveridge described two new geckos from Angola Afroedura karroica bogerti and Pachydactylus scutatus angolensis. The descriptions of both species have vague and confusing type localities and refinements are suggested based on early expedition reports historical accounts from the region and a review of cartographic material. Numerous new distribution records are reported for both species from expeditions undertaken from 1956–2016 by the authors or their colleagues. The taxonomic status of both species has changed but new material from diverse habitats altitudes and geological substrates indicates that further taxonomic adjustments are likely in order to reflect additional cryptic diversity.

La depresión en la infancia desde la perspectiva de las taxonomías empíricas

OpenAIRE

López Soler, Concepción; López Pina, José Antonio

1998-01-01

En este trabajo se analiza la depresión infantil desde el modelo de taxonomías empíricas propuesto por Achenbach y Edelbrock. Se revisan algunos aspectos diferenciales en el diagnóstico de la depresión en menores y adultos. La parte empírica se cent

Taxonomic diversity dynamics of early cretaceous brachiopods and gastropods in the Azerbaijanian domains of the Lesser Caucasus (Neo-Tethys Ocean

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Ruban Dmitry A.

2014-01-01

Full Text Available Palaeontological data available from the Azerbaijanian domains (Somkhit-Agdam, Sevan-Karabakh, and Miskhan-Kafan tectonic zones of the Lesser Caucasus permit reconstruction of the regional taxonomic diversity dynamics of two groups of Early Cretaceous marine benthic invertebrates. Stratigraphical ranges of 31 species and 14 genera of brachiopods and 40 species and 31 genera of gastropods are considered. The total number of species and genera of brachiopods was low in the Berriasian-Valanginian and then rose to peak in the Barremian. Then, the diversity declined in the Aptian, and brachiopods are not known regionally from the Albian. Gastropods appeared in the Hauterivian and experienced a strong radiation in the Barremian. The diversity of species and genera declined in the Aptian (with a minor radiation in the Middle Aptian, and no gastropods are reported from the Albian. Globally, the number of brachiopod genera remained stable through the Early Cretaceous, and the number of gastropod genera increased stepwise with the maximum in the Albian. The regional and global patterns of the diversity dynamics differed for the both groups of marine benthic invertebrates. The Barremian maximum of the taxonomic diversity coincided with the regional flourishing of reefal ecosystems. The taxonomic diversity dynamics of brachiopods in the Azerbaijanian domains of the Lesser Caucasus is very similar to those of the Northern Caucasus, which is an evidence of proximity of these regions during the Early Cretaceous.

Highly polytypic taxon complex: interspecific and intraspecific integrative taxonomic assessment of the widespread pollinator Bombus pascuorum Scopoli 1763 (Hymenoptera: Apidae)

Czech Academy of Sciences Publication Activity Database

Lecocq, T.; Brasero, N.; Martinet, B.; Valterová, Irena; Rasmont, P.

2015-01-01

Roč. 40, č. 4 (2015), s. 881-890 ISSN 0307-6970 Institutional support: RVO:61388963 Keywords : integrative taxonomic approach * labial gland secretions * genetic markers * colour pattern Subject RIV: CC - Organic Chemistry Impact factor: 3.343, year: 2015

Habitat connectivity and local conditions shape taxonomic and functional diversity of arthropods on green roofs.

Science.gov (United States)

Braaker, Sonja; Obrist, Martin Karl; Ghazoul, Jaboury; Moretti, Marco

2017-05-01

Increasing development of urban environments creates high pressure on green spaces with potential negative impacts on biodiversity and ecosystem services. There is growing evidence that green roofs - rooftops covered with vegetation - can contribute mitigate the loss of urban green spaces by providing new habitats for numerous arthropod species. Whether green roofs can contribute to enhance taxonomic and functional diversity and increase connectivity across urbanized areas remains, however, largely unknown. Furthermore, only limited information is available on how environmental conditions shape green roof arthropod communities. We investigated the community composition of arthropods (Apidae, Curculionidae, Araneae and Carabidae) on 40 green roofs and 40 green sites at ground level in the city of Zurich, Switzerland. We assessed how the site's environmental variables (such as area, height, vegetation, substrate and connectivity among sites) affect species richness and functional diversity using generalized linear models. We used an extension of co-inertia analysis (RLQ) and fourth-corner analysis to highlight the mechanism underlying community assemblages across taxonomic groups on green roof and ground communities. Species richness was higher at ground-level sites, while no difference in functional diversity was found between green roofs and ground sites. Green roof arthropod diversity increased with higher connectivity and plant species richness, irrespective of substrate depth, height and area of green roofs. The species trait analysis reviewed the mechanisms related to the environmental predictors that shape the species assemblages of the different taxa at ground and roof sites. Our study shows the important contribution of green roofs in maintaining high functional diversity of arthropod communities across different taxonomic groups, despite their lower species richness compared with ground sites. Species communities on green roofs revealed to be characterized

Textual and language flaws: problems for Spanish doctors in producing abstracts in English

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Lourdes Divasson Cilveti

2006-04-01

Full Text Available Scientific journals are the primary source of information for researchers. The number of articles currently indexed in databases is so large that it has become almost impossible to read every relevant article in a particular field. Thus, research paper abstracts (RPAs have acquired increasing importance. Several studies have shown that they are the skipping point, particularly among non-native English speakers. To our knowledge, little research has been carried out on RPA writing by Spanish doctors. It is thus the objective of this article to analyse the way abstracts are structured and linguistically realized by these professionals. We selected 30 RPAs written in English by Spanish speaking doctors from three leading Spanish journals on internal medicine. We recorded their textual level flaws by measuring the degree of informativeness with regard to three main variables: move patterning, ordering and structuring, and their language use flaws under two broad categories: ortho-typographic and grammatical. Length, use of hedges and keywords were also identified. 86.6% of the abstracts were informative, 13.3% uninformative while none of them could be classified as highly informative. With regard to the authors' use of language, over 70% presented some kind of flaws: 21.55% of these mistakes were ortho-typographic while 78.44% were grammatical. Our results support the need of designing specific units geared on the one hand towards explicit teaching of structured abstracts and on the other, towards the difficulties found by doctors because they lack language competence. They would also benefit from clearer guidelines from journal editors.

Introducing SONS, a Tool for Operational Taxonomic Unit-Based Comparisons of Microbial Community Memberships and Structures

OpenAIRE

Schloss, Patrick D.; Handelsman, Jo

2006-01-01

The recent advent of tools enabling statistical inferences to be drawn from comparisons of microbial communities has enabled the focus of microbial ecology to move from characterizing biodiversity to describing the distribution of that biodiversity. Although statistical tools have been developed to compare community structures across a phylogenetic tree, we lack tools to compare the memberships and structures of two communities at a particular operational taxonomic unit (OTU) definition. Furt...

Evolution of microgastropods (Ellobioidea, Carychiidae): integrating taxonomic, phylogenetic and evolutionary hypotheses

Science.gov (United States)

2013-01-01

Background Current biodiversity patterns are considered largely the result of past climatic and tectonic changes. In an integrative approach, we combine taxonomic and phylogenetic hypotheses to analyze temporal and geographic diversification of epigean (Carychium) and subterranean (Zospeum) evolutionary lineages in Carychiidae (Eupulmonata, Ellobioidea). We explicitly test three hypotheses: 1) morphospecies encompass unrecognized evolutionary lineages, 2) limited dispersal results in a close genetic relationship of geographical proximally distributed taxa and 3) major climatic and tectonic events had an impact on lineage diversification within Carychiidae. Results Initial morphospecies assignments were investigated by different molecular delimitation approaches (threshold, ABGD, GMYC and SP). Despite a conservative delimitation strategy, carychiid morphospecies comprise a great number of unrecognized evolutionary lineages. We attribute this phenomenon to historic underestimation of morphological stasis and phenotypic variability amongst lineages. The first molecular phylogenetic hypothesis for the Carychiidae (based on COI, 16S and H3) reveals Carychium and Zospeum to be reciprocally monophyletic. Geographical proximally distributed lineages are often closely related. The temporal diversification of Carychiidae is best described by a constant rate model of diversification. The evolution of Carychiidae is characterized by relatively few (long distance) colonization events. We find support for an Asian origin of Carychium. Zospeum may have arrived in Europe before extant members of Carychium. Distantly related Carychium clades inhabit a wide spectrum of the available bioclimatic niche and demonstrate considerable niche overlap. Conclusions Carychiid taxonomy is in dire need of revision. An inferred wide distribution and variable phenotype suggest underestimated diversity in Zospeum. Several Carychium morphospecies are results of past taxonomic lumping. By collecting

Taxonomic changes in Oenothera sections Gaura and Calylophus (Onagraceae).

Science.gov (United States)

Wagner, Warren L; Krakos, Kyra N; Hoch, Peter C

2013-01-01

The long-recognized genus Gaura was shown recently to be deeply nested within one of two major clades of Oenothera. New molecular data indicate further taxonomic changes are necessary in Oenothera sect. Gaura. We make these changes here, including three new combinations, in advance of the Onagraceae treatment for the Flora of North America. The new phylogenetic studies show that several pairs of taxa treated as subspecies in the most recent revision by Raven and Gregory (1972) had independent origins within sect. Gaura, and are here elevated to species level (Oenothera nealleyi for Gaura suffulta subsp. nealleyi; Oenothera dodgeniana for Gaura neomexicana subsp. neomexicana; and Oenothera podocarpa for Gaura hexandra subsp. gracilis). Also, a nomenclatural problem in Oenothera sect. Calylophus is corrected by adopting the name Oenothera capillifolia Scheele for the species known previously, and nomenclaturally correct, as Calylophus berlandieri Spach. This problem necessitates a new combination Oenothera capillifolia subsp. berlandieri.