WorldWideScience

Sample records for terrestrial species richness

  1. Global assessment of the effects of terrestrial acidification on plant species richness

    International Nuclear Information System (INIS)

    Azevedo, Ligia B.; Zelm, Rosalie van; Hendriks, A. Jan; Bobbink, Roland; Huijbregts, Mark A.J.

    2013-01-01

    This study estimates the potential losses of vascular plant species richness due to terrestrial acidification for different world's biomes. We used empirical occurrence data of 2409 species from 140 studies and estimated the relative species richness – pH response curves using logistic regressions. The regressions were then used to quantify the fraction of species that are potentially lost due to soil pH changes. Although we found considerable variability within biomes, out results show that the pH at which species richness was maximized was found to be the lowest in (sub)tropical forests (pH = 4.1) and the highest in deserts (pH = 7.4). We also found that (sub)tropical moist forests are highly sensitive to decreases of in soil pH below 4.1. This study can be coupled with existing atmospheric deposition models to quantify the risk of species richness loss following soil acidification. Highlights: ► We compare the sensitivity of four biomes to soil acidification. ► We develop logistic regressions using observational field data. ► Sub(tropical) moist forests are highly affected by pH decreases. ► Logistic regressions can be linked to global scale atmospheric and soil fate models. -- Relationships of potential species richness loss along a soil pH gradient are proposed

  2. A global evaluation of metabolic theory as an explanation for terrestrial species richness gradients

    DEFF Research Database (Denmark)

    Hawkins, Bradford A.; Albuquerque, Fabio S.; Araújo, Miguel B.

    2007-01-01

    We compiled 46 broadscale data sets of species richness for a wide range of terrestrial plant, invertebrate, and ectothermic vertebrate groups in all parts of the world to test the ability of metabolic theory to account for observed diversity gradients. The theory makes two related predictions: (...

  3. Energy and speleogenesis: Key determinants of terrestrial species richness in caves.

    Science.gov (United States)

    Jiménez-Valverde, Alberto; Sendra, Alberto; Garay, Policarp; Reboleira, Ana Sofia P S

    2017-12-01

    The aim of this study was to unravel the relative role played by speleogenesis (i.e., the process in which a cave is formed), landscape-scale variables, and geophysical factors in the determination of species richness in caves. Biological inventories from 21 caves located in the southeastern Iberian Peninsula along with partial least square (PLS) regression analysis were used to assess the relative importance of the different explanatory variables. The caves were grouped according to the similarity in their species composition; the effect that spatial distance could have on similarity was also studied using correlation between matrices. The energy and speleogenesis of caves accounted for 44.3% of the variation in species richness. The trophic level of each cave was the most significant factor in PLS regression analysis, and epigenic caves (i.e., those formed by the action of percolating water) had significantly more species than hypogenic ones (i.e., those formed by the action of upward flows in confined aquifers). Dissimilarity among the caves was very high (multiple-site β sim  = 0.92). Two main groups of caves were revealed through the cluster analysis, one formed by the western caves and the other by the eastern ones. The significant-but low-correlation found between faunistic dissimilarity and geographical distance ( r  =   .16) disappeared once the caves were split into the two groups. The extreme beta-diversity suggests a very low connection among the caves and/or a very low dispersal capacity of the species. In the region under study, two main factors are intimately related to the richness of terrestrial subterranean species in caves: the amount of organic material (trophic level) and the formation process (genesis). This is the first time that the history of a cave genesis has been quantitatively considered to assess its importance in explaining richness patterns in comparison with other factors more widely recognized.

  4. Hotspots of species richness, threat and endemism for terrestrial vertebrates in SW Europe

    Science.gov (United States)

    Pascual, López-López; Luigi, Maiorano; Alessandra, Falcucci; Emilio, Barba; Luigi, Boitani

    2011-09-01

    The Mediterranean basin, and the Iberian Peninsula in particular, represent an outstanding "hotspot" of biological diversity with a long history of integration between natural ecosystems and human activities. Using deductive distribution models, and considering both Spain and Portugal, we downscaled traditional range maps for terrestrial vertebrates (amphibians, breeding birds, mammals and reptiles) to the finest possible resolution with the data at hand, and we identified hotspots based on three criteria: i) species richness; ii) vulnerability, and iii) endemism. We also provided a first evaluation of the conservation status of biodiversity hotspots based on these three criteria considering both existing and proposed protected areas (i.e., Natura 2000). For the identification of hotspots, we used a method based on the cumulative distribution functions of species richness values. We found no clear surrogacy among the different types of hotspots in the Iberian Peninsula. The most important hotspots (considering all criteria) are located in the western and southwestern portions of the study area, in the Mediterranean biogeographical region. Existing protected areas are not specifically concentrated in areas of high species richness, with only 5.2% of the hotspots of total richness being currently protected. The Natura 2000 network can potentially constitute an important baseline for protecting vertebrate diversity in the Iberian Peninsula although further improvements are needed. We suggest taking a step forward in conservation planning in the Mediterranean basin, explicitly considering the history of the region as well as its present environmental context. This would allow moving from traditional reserve networks (conservation focused on "patterns") to considerations about the "processes" that generated present biodiversity.

  5. Multiscale assessment of patterns of avian species richness

    DEFF Research Database (Denmark)

    Rahbek, C; Graves, G R

    2001-01-01

    at continental scales. We used a database of the geographic ranges of 2,869 species of birds breeding in South America (nearly a third of the world's living avian species) to explore the influence of climate, quadrat area, ecosystem diversity, and topography on species richness gradients at 10 spatial scales...... (quadrat area, approximately 12,300 to approximately 1,225,000 km(2)). Topography, precipitation, topography x latitude, ecosystem diversity, and cloud cover emerged as the most important predictors of regional variability of species richness in regression models incorporating 16 independent variables...... the hypothesis that terrestrial species richness from the equator to the poles is ultimately governed by a synergism between climate and coarse-scale topographic heterogeneity....

  6. Geographical Gradients in Argentinean Terrestrial Mammal Species Richness and Their Environmental Correlates

    Science.gov (United States)

    Márquez, Ana L.; Real, Raimundo; Kin, Marta S.; Guerrero, José Carlos; Galván, Betina; Barbosa, A. Márcia; Olivero, Jesús; Palomo, L. Javier; Vargas, J. Mario; Justo, Enrique

    2012-01-01

    We analysed the main geographical trends of terrestrial mammal species richness (SR) in Argentina, assessing how broad-scale environmental variation (defined by climatic and topographic variables) and the spatial form of the country (defined by spatial filters based on spatial eigenvector mapping (SEVM)) influence the kinds and the numbers of mammal species along these geographical trends. We also evaluated if there are pure geographical trends not accounted for by the environmental or spatial factors. The environmental variables and spatial filters that simultaneously correlated with the geographical variables and SR were considered potential causes of the geographic trends. We performed partial correlations between SR and the geographical variables, maintaining the selected explanatory variables statistically constant, to determine if SR was fully explained by them or if a significant residual geographic pattern remained. All groups and subgroups presented a latitudinal gradient not attributable to the spatial form of the country. Most of these trends were not explained by climate. We used a variation partitioning procedure to quantify the pure geographic trend (PGT) that remained unaccounted for. The PGT was larger for latitudinal than for longitudinal gradients. This suggests that historical or purely geographical causes may also be relevant drivers of these geographical gradients in mammal diversity. PMID:23028254

  7. Geographical Gradients in Argentinean Terrestrial Mammal Species Richness and Their Environmental Correlates

    Directory of Open Access Journals (Sweden)

    Ana L. Márquez

    2012-01-01

    Full Text Available We analysed the main geographical trends of terrestrial mammal species richness (SR in Argentina, assessing how broad-scale environmental variation (defined by climatic and topographic variables and the spatial form of the country (defined by spatial filters based on spatial eigenvector mapping (SEVM influence the kinds and the numbers of mammal species along these geographical trends. We also evaluated if there are pure geographical trends not accounted for by the environmental or spatial factors. The environmental variables and spatial filters that simultaneously correlated with the geographical variables and SR were considered potential causes of the geographic trends. We performed partial correlations between SR and the geographical variables, maintaining the selected explanatory variables statistically constant, to determine if SR was fully explained by them or if a significant residual geographic pattern remained. All groups and subgroups presented a latitudinal gradient not attributable to the spatial form of the country. Most of these trends were not explained by climate. We used a variation partitioning procedure to quantify the pure geographic trend (PGT that remained unaccounted for. The PGT was larger for latitudinal than for longitudinal gradients. This suggests that historical or purely geographical causes may also be relevant drivers of these geographical gradients in mammal diversity.

  8. Environmental heterogeneity–species richness relationships from a global perspective

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    Anke Stein

    2016-01-01

    Full Text Available Spatial environmental heterogeneity (EH is considered one of the most important factors promoting species richness, but no general consent about the EH–richness relationship exists so far. This is because research methods and study settings vary widely, and because non-significant and negative associations have also been reported. My thesis provides a comprehensive review of the different measurements and terminologies of EH used in the literature, and presents strong quantitative evidence of a generally positive relationship between biotic and abiotic EH and species richness of terrestrial plants and animals from landscape to global extents. In a meta-analysis and a subsequent case study comparing multiple EH measures and their association with mammal species richness worldwide, I furthermore reveal that the outcome of EH–richness studies depends strongly on study design, including both the EH measure chosen and spatial scale. My research contributes to a better understanding of the EH–richness relationship, while identifying future research needs.

  9. Partitioning sources of variation in vertebrate species richness

    Science.gov (United States)

    Boone, R.B.; Krohn, W.B.

    2000-01-01

    Aim: To explore biogeographic patterns of terrestrial vertebrates in Maine, USA using techniques that would describe local and spatial correlations with the environment. Location: Maine, USA. Methods: We delineated the ranges within Maine (86,156 km2) of 275 species using literature and expert review. Ranges were combined into species richness maps, and compared to geomorphology, climate, and woody plant distributions. Methods were adapted that compared richness of all vertebrate classes to each environmental correlate, rather than assessing a single explanatory theory. We partitioned variation in species richness into components using tree and multiple linear regression. Methods were used that allowed for useful comparisons between tree and linear regression results. For both methods we partitioned variation into broad-scale (spatially autocorrelated) and fine-scale (spatially uncorrelated) explained and unexplained components. By partitioning variance, and using both tree and linear regression in analyses, we explored the degree of variation in species richness for each vertebrate group that Could be explained by the relative contribution of each environmental variable. Results: In tree regression, climate variation explained richness better (92% of mean deviance explained for all species) than woody plant variation (87%) and geomorphology (86%). Reptiles were highly correlated with environmental variation (93%), followed by mammals, amphibians, and birds (each with 84-82% deviance explained). In multiple linear regression, climate was most closely associated with total vertebrate richness (78%), followed by woody plants (67%) and geomorphology (56%). Again, reptiles were closely correlated with the environment (95%), followed by mammals (73%), amphibians (63%) and birds (57%). Main conclusions: Comparing variation explained using tree and multiple linear regression quantified the importance of nonlinear relationships and local interactions between species

  10. Mammal predator and prey species richness are strongly linked at macroscales

    DEFF Research Database (Denmark)

    Sandom, Christopher James; Dalby, Lars; Fløjgaard, Camilla

    2013-01-01

    Predator–prey interactions play an important role for species composition and community dynamics at local scales, but their importance in shaping large-scale gradients of species richness remains unexplored. Here, we use global range maps, structural equation models (SEM), and comprehensive...... databases of dietary preferences and body masses of all terrestrial, non-volant mammals worldwide, to test whether (1) prey-bottom-up or predator- top-down relationships are important drivers of broad-scale species richness gradients once the environment and human influence has been accounted for, (2...... between them (e.g., large prey to small predators), suggesting that mass-related energetic and physiological constraints influence broad-scale richness links, especially for large-bodied mammals. Overall, our results support the idea that trophic interactions can be important drivers of large...

  11. Marine diversity: the paradigms in patterns of species richness examined

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    John S. Gray

    2001-12-01

    Full Text Available The two central paradigms of marine diversity are that there is a latitudinal cline of increasing species richness from poles to tropics and that species richness increases with depth to a maximum around 2,000 m and thereafter decreases. However, these paradigms were based on data collected in the late 1950´s and early 1960´s. Here I show that the 1960´s data, are not representative and thus the paradigms need re-examination. New data from coastal areas in the northern hemisphere record species richness as high as the highest recorded in the deep-sea. Whilst this suggests that the cline of increasing diversity from shallow to deep-sea does not exist, however, the database for the deep sea is not sufficient to draw such a conclusion. The basic problem with the data from the 1960s is that samples were taken on ecological scales and yet they are used to answer evolutionary questions. The questions that such data were to answer were why do the tropics have higher species richness than polar regions or why do deep-sea sediments have more species than coastal sediments? Evolutionary questions need data from much larger spatial areas. Recently, data representative of large scales have been collected from coastal areas in the northern hemisphere and show that there is a cline of increasing species richness from the Arctic to the tropics, but there does not yet seem to be a similar cline in the southern hemisphere. A number of hypotheses have been proposed for the observed patterns in biodiversity. In terrestrial ecology the energy-productivity hypothesis has gained wide acceptance as an explanation for the latitudinal gradient. Here I examine this and other hypotheses critically. Finally an analysis of research priorities is made. Assessment is urgently needed of the spatial scales and dynamics of species richness from point samples to assemblages, habitats and landscapes, especially in coastal areas and in the tropics, where the threats to

  12. Beta Diversity in a Highly Heterogeneous Area: Disentangling Species and Taxonomic Dissimilarity for Terrestrial Vertebrates.

    Science.gov (United States)

    Calderón-Patrón, Jaime M; Goyenechea, Irene; Ortiz-Pulido, Raúl; Castillo-Cerón, Jesús; Manriquez, Norma; Ramírez-Bautista, Aurelio; Rojas-Martínez, Alberto E; Sánchez-Rojas, Gerardo; Zuria, Iriana; Moreno, Claudia E

    2016-01-01

    Quantifying differences in species composition among communities provides important information related to the distribution, conservation and management of biodiversity, especially when two components are recognized: dissimilarity due to turnover, and dissimilarity due to richness differences. The ecoregions in central Mexico, within the Mexican Transition Zone, have outstanding environmental heterogeneity and harbor huge biological richness, besides differences in the origin of the biota. Therefore, biodiversity studies in this area require the use of complementary measures to achieve appropriate information that may help in the design of conservation strategies. In this work we analyze the dissimilarity of terrestrial vertebrates, and the components of turnover and richness differences, among six ecoregions in the state of Hidalgo, central Mexico. We follow two approaches: one based on species level dissimilarity, and the second on taxonomic dissimilarity. We used databases from the project "Biodiversity in the state of Hidalgo". Our results indicate that species dissimilarity is higher than taxonomic dissimilarity, and that turnover contributes more than richness differences, both for species and taxonomic total dissimilarity. Moreover, total dissimilarity, turnover dissimilarity and the dissimilarity due to richness differences were positively related in the four vertebrate groups. Reptiles had the highest values of dissimilarity, followed by mammals, amphibians and birds. For reptiles, birds, and mammals, species turnover was the most important component, while richness differences had a higher contribution for amphibians. The highest values of dissimilarity occurred between environmentally contrasting ecoregions (i.e., tropical and temperate forests), which suggests that environmental heterogeneity and differences in the origin of biotas are key factors driving beta diversity of terrestrial vertebrates among ecoregions in this complex area.

  13. Beta Diversity in a Highly Heterogeneous Area: Disentangling Species and Taxonomic Dissimilarity for Terrestrial Vertebrates

    Science.gov (United States)

    Calderón-Patrón, Jaime M.; Goyenechea, Irene; Ortiz-Pulido, Raúl; Castillo-Cerón, Jesús; Manriquez, Norma; Ramírez-Bautista, Aurelio; Rojas-Martínez, Alberto E.; Sánchez-Rojas, Gerardo; Zuria, Iriana

    2016-01-01

    Quantifying differences in species composition among communities provides important information related to the distribution, conservation and management of biodiversity, especially when two components are recognized: dissimilarity due to turnover, and dissimilarity due to richness differences. The ecoregions in central Mexico, within the Mexican Transition Zone, have outstanding environmental heterogeneity and harbor huge biological richness, besides differences in the origin of the biota. Therefore, biodiversity studies in this area require the use of complementary measures to achieve appropriate information that may help in the design of conservation strategies. In this work we analyze the dissimilarity of terrestrial vertebrates, and the components of turnover and richness differences, among six ecoregions in the state of Hidalgo, central Mexico. We follow two approaches: one based on species level dissimilarity, and the second on taxonomic dissimilarity. We used databases from the project “Biodiversity in the state of Hidalgo”. Our results indicate that species dissimilarity is higher than taxonomic dissimilarity, and that turnover contributes more than richness differences, both for species and taxonomic total dissimilarity. Moreover, total dissimilarity, turnover dissimilarity and the dissimilarity due to richness differences were positively related in the four vertebrate groups. Reptiles had the highest values of dissimilarity, followed by mammals, amphibians and birds. For reptiles, birds, and mammals, species turnover was the most important component, while richness differences had a higher contribution for amphibians. The highest values of dissimilarity occurred between environmentally contrasting ecoregions (i.e., tropical and temperate forests), which suggests that environmental heterogeneity and differences in the origin of biotas are key factors driving beta diversity of terrestrial vertebrates among ecoregions in this complex area. PMID:27500934

  14. Testing the Effectiveness of Environmental Variables to Explain European Terrestrial Vertebrate Species Richness across Biogeographical Scales.

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    Maud Mouchet

    Full Text Available We compared the effectiveness of environmental variables, and in particular of land-use indicators, to explain species richness patterns across taxonomic groups and biogeographical scales (i.e. overall pan-Europe and ecoregions within pan-Europe. Using boosted regression trees that handle non-linear relationships, we compared the relative influence (as a measure of effectiveness of environmental variables related to climate, landscape (or habitat heterogeneity, land-use intensity or energy availability to explain European vertebrate species richness (birds, amphibians, and mammals at the continental and ecoregion scales. We found that dominant land cover and actual evapotranspiration that relate to energy availability were the main correlates of vertebrate species richness over Europe. At the ecoregion scale, we identified four distinct groups of ecoregions where species richness was essentially associated to (i seasonality of temperature, (ii actual evapotranspiration and/or mean annual temperature, (iii seasonality of precipitation, actual evapotranspiration and land cover and (iv and an even combination of the environmental variables. This typology of ecoregions remained valid for total vertebrate richness and the three vertebrate groups taken separately. Despite the overwhelming influence of land cover and actual evapotranspiration to explain vertebrate species richness patterns at European scale, the ranking of the main correlates of species richness varied between regions. Interestingly, landscape and land-use indicators did not stand out at the continental scale but their influence greatly increased in southern ecoregions, revealing the long-lasting human footprint on land-use-land-cover changes. Our study provides one of the first multi-scale descriptions of the variability in the ranking of correlates across several taxa.

  15. Species richness, habitable volume, and species densities in freshwater, the sea, and on land

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    Michael N Dawson

    2012-09-01

    Full Text Available Approximately 0.5–2.0 million eukaryotic species inhabit the seas, whereas 2.0–10.0 million inhabit freshwater or the land. Much has been made of this several-fold difference in species richness but there is little consensus about the causes. Here, I ask a related question: what is the relative density of species in marine and non-marine realms? I use recent estimates of global eukaryotic species richness and published estimates of the areal coverage and depth of habitat for freshwater, marine, and terrestrial biomes. I find that the marine realm harbors ~99.83% of the habitable volume on this planet. Eukaryotic species density of the marine realm is ~3600-fold (i.e., 3-4 orders of magnitude less than that of non-marine environments. Species–volume relationships (SVRs help reconcile actinopterygian fish diversity with global primary productivity and emphasize the interacting roles of abiotic and biotic complexity in shaping patterns of biodiversity in freshwater, the sea, and on land. Comparing SVRs of habitats within and across realms may help resolve the factors and interactions that influence species density.

  16. Resource stoichiometry and availability modulate species richness and biomass of tropical litter macro-invertebrates.

    Science.gov (United States)

    Jochum, Malte; Barnes, Andrew D; Weigelt, Patrick; Ott, David; Rembold, Katja; Farajallah, Achmad; Brose, Ulrich

    2017-09-01

    High biodiversity and biomass of soil communities are crucial for litter decomposition in terrestrial ecosystems such as tropical forests. However, the leaf litter that these communities consume is of particularly poor quality as indicated by elemental stoichiometry. The impact of resource quantity, quality and other habitat parameters on species richness and biomass of consumer communities is often studied in isolation, although much can be learned from simultaneously studying both community characteristics. Using a dataset of 780 macro-invertebrate consumer species across 32 sites in tropical lowland rain forest and agricultural systems on Sumatra, Indonesia, we investigated the effects of basal resource stoichiometry (C:X ratios of N, P, K, Ca, Mg, Na, S in local leaf litter), litter mass (basal resource quantity and habitat space), plant species richness (surrogate for litter habitat heterogeneity), and soil pH (acidity) on consumer species richness and biomass across different consumer groups (i.e. 3 feeding guilds and 10 selected taxonomic groups). In order to distinguish the most important predictors of consumer species richness and biomass, we applied a standardised model averaging approach investigating the effects of basal resource stoichiometry, litter mass, plant species richness and soil pH on both consumer community characteristics. This standardised approach enabled us to identify differences and similarities in the magnitude and importance of such effects on consumer species richness and biomass. Across consumer groups, we found litter mass to be the most important predictor of both species richness and biomass. Resource stoichiometry had a more pronounced impact on consumer species richness than on their biomass. As expected, taxonomic groups differed in which resource and habitat parameters (basal resource stoichiometry, litter mass, plant species richness and pH) were most important for modulating their community characteristics. The importance

  17. Effectiveness of protected areas for representing species and populations of terrestrial mammals in Costa Rica.

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    José F González-Maya

    Full Text Available Costa Rica has one of the greatest percentages (26% of protected land in the world. The National Protected Areas System (NPAS of Costa Rica was established in 1976 and currently includes >190 protected areas within seven different protection categories. The effectiveness of the NPAS to represent species, populations, and areas with high species richness has not been properly evaluated. Such evaluations are fundamental to understand what is necessary to strengthen the NPAS and better protect biodiversity. We present a novel assessment of NPAS effectiveness in protecting mammal species. We compiled the geographical ranges of all terrestrial Costa Rican mammals then determined species lists for all protected areas and the estimated proportion of each species' geographic range protected. We also classified mammal species according to their conservation status using the IUCN Red List of Threatened Species. We found almost complete representation of mammal species (98.5% in protected areas, but low relative coverage (28.3% on average of their geographic ranges in Costa Rica and 25% of the species were classified as underprotected according to a priori representation targets. Interestingly, many species-rich areas are not protected, and at least 43% of cells covering the entire country are not included in protected areas. Though protected areas in Costa Rica represent species richness well, strategic planning for future protected areas to improve species complementarity and range protection is necessary. Our results can help to define sites where new protected areas can have a greater impact on mammal conservation, both in terms of species richness and range protection.

  18. Effectiveness of Protected Areas for Representing Species and Populations of Terrestrial Mammals in Costa Rica

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    González-Maya, José F.; Víquez-R, Luis R.; Belant, Jerrold L.; Ceballos, Gerardo

    2015-01-01

    Costa Rica has one of the greatest percentages (26%) of protected land in the world. The National Protected Areas System (NPAS) of Costa Rica was established in 1976 and currently includes >190 protected areas within seven different protection categories. The effectiveness of the NPAS to represent species, populations, and areas with high species richness has not been properly evaluated. Such evaluations are fundamental to understand what is necessary to strengthen the NPAS and better protect biodiversity. We present a novel assessment of NPAS effectiveness in protecting mammal species. We compiled the geographical ranges of all terrestrial Costa Rican mammals then determined species lists for all protected areas and the estimated proportion of each species’ geographic range protected. We also classified mammal species according to their conservation status using the IUCN Red List of Threatened Species. We found almost complete representation of mammal species (98.5%) in protected areas, but low relative coverage (28.3% on average) of their geographic ranges in Costa Rica and 25% of the species were classified as underprotected according to a priori representation targets. Interestingly, many species-rich areas are not protected, and at least 43% of cells covering the entire country are not included in protected areas. Though protected areas in Costa Rica represent species richness well, strategic planning for future protected areas to improve species complementarity and range protection is necessary. Our results can help to define sites where new protected areas can have a greater impact on mammal conservation, both in terms of species richness and range protection. PMID:25970293

  19. Species richness and conservation status of medium and large terrestrial mammals from four Sky Islands in Sonora, northwestern Mexico

    OpenAIRE

    Coronel-Arellano, Helí; Lara-Díaz, Nalleli; Jiménez-Maldonado, Rosa; López-González, Carlos

    2016-01-01

    We present the first systematic checklist of medium and large terrestrial mammals on four mountain ranges known as Sky Islands, in northeastern Sonora, Mexico. We used camera traps for recording mammals, with which we documented 25 wild species. Two of the native species are in the IUCN Red List and four are threatened at the national level. We did not document seven wild species with potential distribution at study sites, probably due to limited availability of habitat and/or local extirpati...

  20. Species richness, area and climate correlates

    DEFF Research Database (Denmark)

    Nogues, David Bravo; Bastos Araujo, Miguel

    2006-01-01

    affects: (1) the selection of climate variables entering a species richness model; and (2) the accuracy of models in predicting species richness in unsampled grid cells. Location Western Europe. Methods Models are developed for European plant, breeding bird, mammal and herptile species richness using...... seven climate variables. Generalized additive models are used to relate species richness, climate and area. Results We found that variation in the grid cell area was large (50 × 50 km: 8-3311 km2; 220 × 220: 193-55,100 km2), but this did not affect the selection of variables in the models. Similarly...... support the assumption that variation in near-equal area cells may be of second-order importance for models explaining or predicting species richness in relation to climate, although there is a possibility that drops in accuracy might increase with grid cell size. The results are, however, contingent...

  1. High spatial variation in terrestrial arthropod species diversity and composition near the Greenland ice cap

    DEFF Research Database (Denmark)

    Hansen, Rikke Reisner; Hansen, Oskar Liset Pryds; Bowden, Joseph James

    2016-01-01

    Arthropods form a major part of the terrestrial species diversity in the Arctic, and are particularly sensitive to temporal changes in the abiotic environment. It is assumed that most Arctic arthropods are habitat generalists and that their diversity patterns exhibit low spatial variation....... The empirical basis for this assumption, however, is weak. We examine the degree of spatial variation in species diversity and assemblage structure among five habitat types at two sites of similar abiotic conditions and plant species composition in southwest Greenland, using standardized field collection...... methods for spiders, beetles and butterflies. We employed non-metric multidimensional scaling, species richness estimation, community dissimilarity and indicator species analysis to test for local (within site)- and regional (between site)-scale differences in arthropod communities. To identify specific...

  2. Terrestrial animals as invasive species and as species at risk from invasions

    Science.gov (United States)

    Deborah M. Finch; Dean Pearson; Joseph Wunderle; Wayne Arendt

    2010-01-01

    Including terrestrial animal species in the invasive species strategy plan is an important step in invasive species management. Invasions by nonindigenous species threaten nearly 50 percent of imperiled native species in the United States and are the Nation's second leading cause of species endangerment. Invasion and conversion of native habitats by exotic species...

  3. Low species richness of non-biting midges (Diptera: Chironomidae) in Neotropical artificial urban water bodies

    DEFF Research Database (Denmark)

    Hamerlik, Ladislav; Jacobsen, Dean; Brodersen, Klaus Peter

    2011-01-01

    Chironomid assemblages of 22 artificial water bodies, mainly fountains, in two South American cities were surveyed. We found surprisingly low diversities, with a total of 11 taxa, averaging two taxa per site. The typical fountain assemblages mainly consisted of common species that have a wide...... distribution pattern and are tolerant to organic pollution. Also taxa independent of the natural aquatic sources, such as tap-water and semi-terrestrial species were represented. There was no significant difference between the taxa richness of the two S. American regions, however, the assemblage structures...

  4. Effect factors for terrestrial acidification in Brazil

    DEFF Research Database (Denmark)

    Crespo Mendes, Natalia; Laurent, Alexis; Hauschild, Michael Zwicky

    conditions, which is an essential approach considering countries like Brazil, with high biodiversity. Previous studies have assessed the impacts of terrestrial acidification from the estimations of the potential losses of vascular plants species richness as a result of exposure to acidifying substances...... for 13 biomes, with 2409 species addressed for whole world. In this context this work aims to provide spatially-differentiated effect factors (EF) for terrestrial acidification in Brazil and support the development of spatially-differentiated characterization factors for Brazil. In order to maintain...... in Brazil, represented by 33167 species, indicating that this is a comprehensive study. Maps of soil pH in Brazil were extracted at 1-km resolution and pH values were extracted for the depth range of 0-30cm. For each ecoregion, species richness was plotted against soil pH and the exposure-response curves...

  5. Changes in Species Richness and Composition of Tiger Moths (Lepidoptera: Erebidae: Arctiinae) among Three Neotropical Ecoregions

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    Beccacece, Hernán Mario; Zeballos, Sebastián Rodolfo; Zapata, Adriana Inés

    2016-01-01

    Paraná, Yungas and Chaco Serrano ecoregions are among the most species-rich terrestrial habitats at higher latitude. However, the information for tiger moths, one of the most speciose groups of moths, is unknown in these ecoregions. In this study, we assess their species richness and composition in all three of these ecoregions. Also we investigated whether the species composition of tiger moths is influenced by climatic factors and altitude. Tiger moth species were obtained with samples from 71 sites using standardized protocols (21 sites were in Yungas, 19 in Paraná and 31 in Chaco Serrano). Rarefaction-extrapolation curves, non-parametric estimators for incidence and sample coverage indices were performed to assess species richness in the ecoregions studied. Non metric multidimensional scaling and adonis tests were performed to compare the species composition of tiger moths among ecoregions. Permutest analysis and Pearson correlation were used to evaluate the relationship among species composition and annual mean temperature, annual temperature range, annual precipitation, precipitation seasonality and altitude. Among ecoregions Paraná was the richest with 125 species, followed by Yungas with 63 species and Chaco Serrano with 24 species. Species composition differed among these ecoregions, although Yungas and Chaco Serrano were more similar than Paraná. Species composition was significantly influenced by climatic factors and altitude. This study showed that species richness and species composition of tiger moths differed among the three ecoregions assessed. Furthermore, not only climatic factors and altitude influence the species composition of tiger moths among ecoregions, but also climatic seasonality at higher latitude in Neotropical South America becomes an important factor. PMID:27681478

  6. Changes in Species Richness and Composition of Tiger Moths (Lepidoptera: Erebidae: Arctiinae among Three Neotropical Ecoregions.

    Directory of Open Access Journals (Sweden)

    Hernán Mario Beccacece

    Full Text Available Paraná, Yungas and Chaco Serrano ecoregions are among the most species-rich terrestrial habitats at higher latitude. However, the information for tiger moths, one of the most speciose groups of moths, is unknown in these ecoregions. In this study, we assess their species richness and composition in all three of these ecoregions. Also we investigated whether the species composition of tiger moths is influenced by climatic factors and altitude. Tiger moth species were obtained with samples from 71 sites using standardized protocols (21 sites were in Yungas, 19 in Paraná and 31 in Chaco Serrano. Rarefaction-extrapolation curves, non-parametric estimators for incidence and sample coverage indices were performed to assess species richness in the ecoregions studied. Non metric multidimensional scaling and adonis tests were performed to compare the species composition of tiger moths among ecoregions. Permutest analysis and Pearson correlation were used to evaluate the relationship among species composition and annual mean temperature, annual temperature range, annual precipitation, precipitation seasonality and altitude. Among ecoregions Paraná was the richest with 125 species, followed by Yungas with 63 species and Chaco Serrano with 24 species. Species composition differed among these ecoregions, although Yungas and Chaco Serrano were more similar than Paraná. Species composition was significantly influenced by climatic factors and altitude. This study showed that species richness and species composition of tiger moths differed among the three ecoregions assessed. Furthermore, not only climatic factors and altitude influence the species composition of tiger moths among ecoregions, but also climatic seasonality at higher latitude in Neotropical South America becomes an important factor.

  7. Threats from climate change to terrestrial vertebrate hotspots in Europe.

    Science.gov (United States)

    Maiorano, Luigi; Amori, Giovanni; Capula, Massimo; Falcucci, Alessandra; Masi, Monica; Montemaggiori, Alessandro; Pottier, Julien; Psomas, Achilleas; Rondinini, Carlo; Russo, Danilo; Zimmermann, Niklaus E; Boitani, Luigi; Guisan, Antoine

    2013-01-01

    We identified hotspots of terrestrial vertebrate species diversity in Europe and adjacent islands. Moreover, we assessed the extent to which by the end of the 21(st) century such hotspots will be exposed to average monthly temperature and precipitation patterns which can be regarded as extreme if compared to the climate experienced during 1950-2000. In particular, we considered the entire European sub-continent plus Turkey and a total of 1149 species of terrestrial vertebrates. For each species, we developed species-specific expert-based distribution models (validated against field data) which we used to calculate species richness maps for mammals, breeding birds, amphibians, and reptiles. Considering four global circulation model outputs and three emission scenarios, we generated an index of risk of exposure to extreme climates, and we used a bivariate local Moran's I to identify the areas with a significant association between hotspots of diversity and high risk of exposure to extreme climates. Our results outline that the Mediterranean basin represents both an important hotspot for biodiversity and especially for threatened species for all taxa. In particular, the Iberian and Italian peninsulas host particularly high species richness as measured over all groups, while the eastern Mediterranean basin is particularly rich in amphibians and reptiles; the islands (both Macaronesian and Mediterranean) host the highest richness of threatened species for all taxa occurs. Our results suggest that the main hotspots of biodiversity for terrestrial vertebrates may be extensively influenced by the climate change projected to occur over the coming decades, especially in the Mediterranean bioregion, posing serious concerns for biodiversity conservation.

  8. Alien species recorded in the United Arab Emirates: an initial list of terrestrial and freshwater species

    Directory of Open Access Journals (Sweden)

    Pritpal Soorae

    2015-10-01

    Full Text Available Little is documented on the alien terrestrial and freshwater species in the United Arab Emirates. To address this, an assessment of terrestrial and freshwater alien species was conducted using various techniques such as a questionnaire, fieldwork data, networking with relevant people, and a detailed literature review. The results of the initial assessment show that there are 146 alien species recorded in the following seven major taxonomic groups: invertebrates 49 species, freshwater fish five species, amphibian one species, reptiles six species, birds 71 species, mammals six species and plants eight species. To inform decision makers a full list of the 146 species identified in this assessment is presented. 

  9. Differentiation of water-related traits in terrestrial and epiphytic Cymbidium species

    Directory of Open Access Journals (Sweden)

    Shi-Bao eZhang

    2015-04-01

    Full Text Available Epiphytes that grow in the canopies of tropical and subtropical forests experience different water regimes when compared with terrestrial plants. However, the differences in adaptive strategies between epiphytic and terrestrial plants with respect to plant water relations remain poorly understood. To understand how water-related traits contrast between epiphytic and terrestrial growth forms within the Cymbidium (Orchidaceae, we assessed leaf anatomy, hydraulics, and physiology of seven terrestrial and 13 epiphytic species using a common garden experiment. Compared with terrestrial species, epiphytic species had higher values for leaf mass per unit area (LMA, leaf thickness (LT, epidermal thickness, saturated water content (SWC and the time required to dry saturated leaves to 70% relative water content (T70. However, vein density (Dvein, stomatal density (SD, and photosynthetic capacity (Amax did not differ significantly between the two forms. T70 was positively correlated with LT, LMA, and SWC, and negatively correlated with stomatal index (SI. Amax showed positive correlations with SD and SI, but not with Dvein. Vein density was marginally correlated with SD, and significantly correlated with SI. Overall, epiphytic orchids exhibited substantial ecophysiological differentiations from terrestrial species, with the former type showing trait values indicative of greater drought tolerance and increased water storage capacity. The ability to retain water in the leaves plays a key role in maintaining a water balance in those epiphytes. Therefore, the process of transpiration depends less upon the current substrate water supply and enables epiphytic Cymbidium species to adapt more easily to canopy habitats.

  10. Biomass production in experimental grasslands of different species richness during three years of climate warming

    Science.gov (United States)

    de Boeck, H. J.; Lemmens, C. M. H. M.; Zavalloni, C.; Gielen, B.; Malchair, S.; Carnol, M.; Merckx, R.; van den Berge, J.; Ceulemans, R.; Nijs, I.

    2008-04-01

    Here we report on the single and combined impacts of climate warming and species richness on the biomass production in experimental grassland communities. Projections of a future warmer climate have stimulated studies on the response of terrestrial ecosystems to this global change. Experiments have likewise addressed the importance of species numbers for ecosystem functioning. There is, however, little knowledge on the interplay between warming and species richness. During three years, we grew experimental plant communities containing one, three or nine grassland species in 12 sunlit, climate-controlled chambers in Wilrijk, Belgium. Half of these chambers were exposed to ambient air temperatures (unheated), while the other half were warmed by 3°C (heated). Equal amounts of water were added to heated and unheated communities, so that warming would imply drier soils if evapotranspiration was higher. Biomass production was decreased due to warming, both aboveground (-29%) and belowground (-25%), as negative impacts of increased heat and drought stress in summer prevailed. Complementarity effects, likely mostly through both increased aboveground spatial complementarity and facilitative effects of legumes, led to higher shoot and root biomass in multi-species communities, regardless of the induced warming. Surprisingly, warming suppressed productivity the most in 9-species communities, which may be attributed to negative impacts of intense interspecific competition for resources under conditions of high abiotic stress. Our results suggest that warming and the associated soil drying could reduce primary production in many temperate grasslands, and that this will not necessarily be mitigated by efforts to maintain or increase species richness.

  11. Geomorphic controls on elevational gradients of species richness.

    Science.gov (United States)

    Bertuzzo, Enrico; Carrara, Francesco; Mari, Lorenzo; Altermatt, Florian; Rodriguez-Iturbe, Ignacio; Rinaldo, Andrea

    2016-02-16

    Elevational gradients of biodiversity have been widely investigated, and yet a clear interpretation of the biotic and abiotic factors that determine how species richness varies with elevation is still elusive. In mountainous landscapes, habitats at different elevations are characterized by different areal extent and connectivity properties, key drivers of biodiversity, as predicted by metacommunity theory. However, most previous studies directly correlated species richness to elevational gradients of potential drivers, thus neglecting the interplay between such gradients and the environmental matrix. Here, we investigate the role of geomorphology in shaping patterns of species richness. We develop a spatially explicit zero-sum metacommunity model where species have an elevation-dependent fitness and otherwise neutral traits. Results show that ecological dynamics over complex terrains lead to the null expectation of a hump-shaped elevational gradient of species richness, a pattern widely observed empirically. Local species richness is found to be related to the landscape elevational connectivity, as quantified by a newly proposed metric that applies tools of complex network theory to measure the closeness of a site to others with similar habitat. Our theoretical results suggest clear geomorphic controls on elevational gradients of species richness and support the use of the landscape elevational connectivity as a null model for the analysis of the distribution of biodiversity.

  12. Evaluating species richness: biased ecological inference results from spatial heterogeneity in species detection probabilities

    Science.gov (United States)

    McNew, Lance B.; Handel, Colleen M.

    2015-01-01

    Accurate estimates of species richness are necessary to test predictions of ecological theory and evaluate biodiversity for conservation purposes. However, species richness is difficult to measure in the field because some species will almost always be overlooked due to their cryptic nature or the observer's failure to perceive their cues. Common measures of species richness that assume consistent observability across species are inviting because they may require only single counts of species at survey sites. Single-visit estimation methods ignore spatial and temporal variation in species detection probabilities related to survey or site conditions that may confound estimates of species richness. We used simulated and empirical data to evaluate the bias and precision of raw species counts, the limiting forms of jackknife and Chao estimators, and multi-species occupancy models when estimating species richness to evaluate whether the choice of estimator can affect inferences about the relationships between environmental conditions and community size under variable detection processes. Four simulated scenarios with realistic and variable detection processes were considered. Results of simulations indicated that (1) raw species counts were always biased low, (2) single-visit jackknife and Chao estimators were significantly biased regardless of detection process, (3) multispecies occupancy models were more precise and generally less biased than the jackknife and Chao estimators, and (4) spatial heterogeneity resulting from the effects of a site covariate on species detection probabilities had significant impacts on the inferred relationships between species richness and a spatially explicit environmental condition. For a real dataset of bird observations in northwestern Alaska, the four estimation methods produced different estimates of local species richness, which severely affected inferences about the effects of shrubs on local avian richness. Overall, our results

  13. Plant species richness sustains higher trophic levels of soil nematode communities after consecutive environmental perturbations.

    Science.gov (United States)

    Cesarz, Simone; Ciobanu, Marcel; Wright, Alexandra J; Ebeling, Anne; Vogel, Anja; Weisser, Wolfgang W; Eisenhauer, Nico

    2017-07-01

    The magnitude and frequency of extreme weather events are predicted to increase in the future due to ongoing climate change. In particular, floods and droughts resulting from climate change are thought to alter the ecosystem functions and stability. However, knowledge of the effects of these weather events on soil fauna is scarce, although they are key towards functioning of terrestrial ecosystems. Plant species richness has been shown to affect the stability of ecosystem functions and food webs. Here, we used the occurrence of a natural flood in a biodiversity grassland experiment that was followed by a simulated summer drought experiment, to investigate the interactive effects of plant species richness, a natural flood, and a subsequent summer drought on nematode communities. Three and five months after the natural flooding, effects of flooding severity were still detectable in the belowground system. We found that flooding severity decreased soil nematode food-web structure (loss of K-strategists) and the abundance of plant feeding nematodes. However, high plant species richness maintained higher diversity and abundance of higher trophic levels compared to monocultures throughout the flood. The subsequent summer drought seemed to be of lower importance but reversed negative flooding effects in some cases. This probably occurred because the studied grassland system is well adapted to drought, or because drought conditions alleviated the negative impact of long-term soil waterlogging. Using soil nematodes as indicator taxa, this study suggests that high plant species richness can maintain soil food web complexity after consecutive environmental perturbations.

  14. Butterfly Species Richness in Selected West Albertine Rift Forests

    Directory of Open Access Journals (Sweden)

    Patrice Kasangaki

    2012-01-01

    Full Text Available The butterfly species richness of 17 forests located in the western arm of the Albertine Rift in Uganda was compared using cluster analysis and principal components analysis (PCA to assess similarities among the forests. The objective was to compare the butterfly species richness of the forests. A total of 630 butterfly species were collected in 5 main families. The different species fell into 7 ecological groupings with the closed forest group having the most species and the swamp/wetland group with the fewest number of species. Three clusters were obtained. The first cluster had forests characterized by relatively high altitude and low species richness despite the big area in the case of Rwenzori and being close to the supposed Pleistocene refugium. The second cluster had forests far away from the supposed refugium except Kisangi and moderate species richness with small areas, whereas the third cluster had those forests that were more disturbed, high species richness, and low altitudinal levels with big areas.

  15. Species richness inside and outside long-term exclosures

    Science.gov (United States)

    W. A. Laycock; D. L. Bartos; K. D. Klement

    2004-01-01

    Recent environmental literature contains claims that livestock grazing has caused reduction in species diversity on Western rangelands. Data of species richness (number of species) is presented from inside and outside 24 long-term exclosures in Montana, Utah, and Wyoming. For the average of all exclosures there was no difference between species richness inside and...

  16. Differences in species richness patterns between unicellular and multicellular organisms.

    Science.gov (United States)

    Hillebrand, Helmut; Watermann, Frank; Karez, Rolf; Berninger, Ulrike-G

    2001-01-01

    For unicellular organisms, a lack of effects of local species richness on ecosystem function has been proposed due to their locally high species richness and their ubiquitous distribution. High dispersal ability and high individual numbers may enable unicellular taxa to occur everywhere. Using our own and published data sets on uni- and multicellular organisms, we conducted thorough statistical analyses to test whether (1) unicellular taxa show higher relative local species richness compared to multicellular taxa, (2) unicellular taxa show lower slopes of the species:area relationships and species:individuals relationships, and (3) the species composition of unicellular taxa is less influenced by geographic distance compared to multicellular taxa. We found higher local species richness compared to the global species pool for unicellular organisms than for metazoan taxa. The difference was significant if global species richness was conservatively estimated but not if extrapolated, and therefore higher richness estimates were used. Both microalgae and protozoans showed lower slopes between species richness and sample size (area or individuals) compared to macrozoobenthos, also indicating higher local species richness for unicellular taxa. The similarity of species composition of both benthic diatoms and ciliates decreased with increasing geographic distance. This indicated restricted dispersal ability of protists and the absence of ubiquity. However, a steeper slope between similarity and distance was found for polychaetes and corals, suggesting a stronger effect of distance on the dispersal of metazoans compared to unicellular taxa. In conclusion, we found partly different species richness patterns among uni- and multicellular eukaryotes, but no strict ubiquity of unicellular taxa. Therefore, the effect of local unicellular species richness on ecosystem function has to be reanalyzed. Macroecological patterns suggested for multicellular organisms may differ in

  17. Estimating tree species richness from forest inventory plot data

    Science.gov (United States)

    Ronald E. McRoberts; Dacia M. Meneguzzo

    2007-01-01

    Montreal Process Criterion 1, Conservation of Biological Diversity, expresses species diversity in terms of number of forest dependent species. Species richness, defined as the total number of species present, is a common metric for analyzing species diversity. A crucial difficulty in estimating species richness from sample data obtained from sources such as inventory...

  18. Geographic range size and determinants of avian species richness

    DEFF Research Database (Denmark)

    Jetz, Walter; Rahbek, Carsten

    2002-01-01

    Geographic patterns in species richness are mainly based on wide-ranging species because their larger number of distribution records has a disproportionate contribution to the species richness counts. Here we demonstrate how this effect strongly influences our understanding of what determines spe...

  19. The definition of species richness used by species sensitivity distributions approximates observed effects of salinity on stream macroinvertebrates

    Energy Technology Data Exchange (ETDEWEB)

    Kefford, Ben J., E-mail: ben.kefford@uts.edu.a [School of Applied Sciences, RMIT University, Victoria (Australia); Centre for Environmental Sustainability, Department of Environmental Science, University of Technology Sydney, New South Wales (Australia); Marchant, Richard [Department of Entomology, Museum of Victoria, Victoria (Australia); Schaefer, Ralf B. [School of Applied Sciences, RMIT University, Victoria (Australia); Metzeling, Leon [EPA Victoria, Macleod, Victoria (Australia); Dunlop, Jason E. [Department of Environment and Resource Management, Indooroopilly, Queensland (Australia); National Research Centre for Environmental Toxicology, University of Queensland, Coopers Plains, Queensland (Australia); Choy, Satish C. [Department of Environment and Resource Management, Indooroopilly, Queensland (Australia); Goonan, Peter [South Australia Environment Protection Authority, Adelaide, South Australia (Australia)

    2011-01-15

    The risk of chemicals for ecological communities is often forecast with species sensitivity distributions (SSDs) which are used to predict the concentration which will protect p% of species (PC{sub p} value). However, at the PC{sub p} value, species richness in nature would not necessary be p% less than at uncontaminated sites. The definition of species richness inherent to SSDs (contaminant category richness) contrasts with species richness typically measured in most field studies (point richness). We determine, for salinity in eastern Australia, whether these definitions of stream macroinvertebrate species richness are commensurable. There were strong relationships (r{sup 2} {>=} 0.87) between mean point species, family and Ephemeroptera, Trichoptera and Plecoptera species richness and their respective contamination category richness. Despite differences in the definition of richness used by SSDs and field biomonitoring, their results in terms of relative species loss from salinity in south-east Australia are similar. We conclude that in our system both definitions are commensurable. - Definitions of species richness inherit in SSDs and biomonitoring are for salinity in south-east Australia commensurable.

  20. The definition of species richness used by species sensitivity distributions approximates observed effects of salinity on stream macroinvertebrates

    International Nuclear Information System (INIS)

    Kefford, Ben J.; Marchant, Richard; Schaefer, Ralf B.; Metzeling, Leon; Dunlop, Jason E.; Choy, Satish C.; Goonan, Peter

    2011-01-01

    The risk of chemicals for ecological communities is often forecast with species sensitivity distributions (SSDs) which are used to predict the concentration which will protect p% of species (PC p value). However, at the PC p value, species richness in nature would not necessary be p% less than at uncontaminated sites. The definition of species richness inherent to SSDs (contaminant category richness) contrasts with species richness typically measured in most field studies (point richness). We determine, for salinity in eastern Australia, whether these definitions of stream macroinvertebrate species richness are commensurable. There were strong relationships (r 2 ≥ 0.87) between mean point species, family and Ephemeroptera, Trichoptera and Plecoptera species richness and their respective contamination category richness. Despite differences in the definition of richness used by SSDs and field biomonitoring, their results in terms of relative species loss from salinity in south-east Australia are similar. We conclude that in our system both definitions are commensurable. - Definitions of species richness inherit in SSDs and biomonitoring are for salinity in south-east Australia commensurable.

  1. Species richness alone does not predict cultural ecosystem service value

    Science.gov (United States)

    Graves, Rose A.; Pearson, Scott M.; Turner, Monica G.

    2017-01-01

    Many biodiversity-ecosystem services studies omit cultural ecosystem services (CES) or use species richness as a proxy and assume that more species confer greater CES value. We studied wildflower viewing, a key biodiversity-based CES in amenity-based landscapes, in Southern Appalachian Mountain forests and asked (i) How do aesthetic preferences for wildflower communities vary with components of biodiversity, including species richness?; (ii) How do aesthetic preferences for wildflower communities vary across psychographic groups?; and (iii) How well does species richness perform as an indicator of CES value compared with revealed social preferences for wildflower communities? Public forest visitors (n = 293) were surveyed during the summer of 2015 and asked to choose among images of wildflower communities in which flower species richness, flower abundance, species evenness, color diversity, and presence of charismatic species had been digitally manipulated. Aesthetic preferences among images were unrelated to species richness but increased with more abundant flowers, greater species evenness, and greater color diversity. Aesthetic preferences were consistent across psychographic groups and unaffected by knowledge of local flora or value placed on wildflower viewing. When actual wildflower communities (n = 54) were ranked based on empirically measured flower species richness or wildflower viewing utility based on multinomial logit models of revealed preferences, rankings were broadly similar. However, designation of hotspots (CES values above the median) based on species richness alone missed 27% of wildflower viewing utility hotspots. Thus, conservation priorities for sustaining CES should incorporate social preferences and consider multiple dimensions of biodiversity that underpin CES supply. PMID:28320953

  2. Island Species Richness Increases with Habitat Diversity

    NARCIS (Netherlands)

    Hortal, J.; Triantis, K.A.; Meiri, S.; Thebault, E.M.C.; Sfenthourakis, S.

    2009-01-01

    Species richness is commonly thought to increase with habitat diversity. However, a recent theoretical model aiming to unify niche and island biogeography theories predicted a hump-shaped relationship between richness and habitat diversity. Given the contradiction between model results and previous

  3. No universal scale-dependent impacts of invasive species on native plant species richness.

    Science.gov (United States)

    Stohlgren, Thomas J; Rejmánek, Marcel

    2014-01-01

    A growing number of studies seeking generalizations about the impact of plant invasions compare heavily invaded sites to uninvaded sites. But does this approach warrant any generalizations? Using two large datasets from forests, grasslands and desert ecosystems across the conterminous United States, we show that (i) a continuum of invasion impacts exists in many biomes and (ii) many possible species-area relationships may emerge reflecting a wide range of patterns of co-occurrence of native and alien plant species. Our results contradict a smaller recent study by Powell et al. 2013 (Science 339, 316-318. (doi:10.1126/science.1226817)), who compared heavily invaded and uninvaded sites in three biomes and concluded that plant communities invaded by non-native plant species generally have lower local richness (intercepts of log species richness-log area regression lines) but steeper species accumulation with increasing area (slopes of the regression lines) than do uninvaded communities. We conclude that the impacts of plant invasions on plant species richness are not universal.

  4. Upscaling species richness and abundances in tropical forests.

    Science.gov (United States)

    Tovo, Anna; Suweis, Samir; Formentin, Marco; Favretti, Marco; Volkov, Igor; Banavar, Jayanth R; Azaele, Sandro; Maritan, Amos

    2017-10-01

    The quantification of tropical tree biodiversity worldwide remains an open and challenging problem. More than two-fifths of the number of worldwide trees can be found either in tropical or in subtropical forests, but only ≈0.000067% of species identities are known. We introduce an analytical framework that provides robust and accurate estimates of species richness and abundances in biodiversity-rich ecosystems, as confirmed by tests performed on both in silico-generated and real forests. Our analysis shows that the approach outperforms other methods. In particular, we find that upscaling methods based on the log-series species distribution systematically overestimate the number of species and abundances of the rare species. We finally apply our new framework on 15 empirical tropical forest plots and quantify the minimum percentage cover that should be sampled to achieve a given average confidence interval in the upscaled estimate of biodiversity. Our theoretical framework confirms that the forests studied are comprised of a large number of rare or hyper-rare species. This is a signature of critical-like behavior of species-rich ecosystems and can provide a buffer against extinction.

  5. Water loss from terrestrial planets with CO2-rich atmospheres

    International Nuclear Information System (INIS)

    Wordsworth, R. D.; Pierrehumbert, R. T.

    2013-01-01

    Water photolysis and hydrogen loss from the upper atmospheres of terrestrial planets is of fundamental importance to climate evolution but remains poorly understood in general. Here we present a range of calculations we performed to study the dependence of water loss rates from terrestrial planets on a range of atmospheric and external parameters. We show that CO 2 can only cause significant water loss by increasing surface temperatures over a narrow range of conditions, with cooling of the middle and upper atmosphere acting as a bottleneck on escape in other circumstances. Around G-stars, efficient loss only occurs on planets with intermediate CO 2 atmospheric partial pressures (0.1-1 bar) that receive a net flux close to the critical runaway greenhouse limit. Because G-star total luminosity increases with time but X-ray and ultraviolet/ultravoilet luminosity decreases, this places strong limits on water loss for planets like Earth. In contrast, for a CO 2 -rich early Venus, diffusion limits on water loss are only important if clouds caused strong cooling, implying that scenarios where the planet never had surface liquid water are indeed plausible. Around M-stars, water loss is primarily a function of orbital distance, with planets that absorb less flux than ∼270 W m –2 (global mean) unlikely to lose more than one Earth ocean of H 2 O over their lifetimes unless they lose all their atmospheric N 2 /CO 2 early on. Because of the variability of H 2 O delivery during accretion, our results suggest that many 'Earth-like' exoplanets in the habitable zone may have ocean-covered surfaces, stable CO 2 /H 2 O-rich atmospheres, and high mean surface temperatures.

  6. Human population, grasshopper and plant species richness in European countries

    Science.gov (United States)

    Steck, Claude E.; Pautasso, Marco

    2008-11-01

    Surprisingly, several studies over large scales have reported a positive spatial correlation of people and biodiversity. This pattern has important implications for conservation and has been documented for well studied taxa such as plants, amphibians, reptiles, birds and mammals. However, it is unknown whether the pattern applies also to invertebrates other than butterflies and more work is needed to establish whether the species-people relationship is explained by both variables correlating with other environmental factors. We studied whether grasshopper species richness (Orthoptera, suborder Caelifera) is related to human population size in European countries. As expected, the number of Caelifera species increases significantly with increasing human population size. But this is not the case when controlling for country area, latitude and number of plant species. Variations in Caelifera species richness are primarily associated with variations in plant species richness. Caelifera species richness also increases with decreasing mean annual precipitation, Gross Domestic Product per capita (used as an indicator for economic development) and net fertility rate of the human population. Our analysis confirms the hypothesis that the broad-scale human population-biodiversity correlations can be explained by concurrent variations in factors other than human population size such as plant species richness, environmental productivity, or habitat heterogeneity. Nonetheless, more populated countries in Europe still have more Caelifera species than less populated countries and this poses a particular challenge for conservation.

  7. Vascular plant and vertebrate species richness in national parks of the eastern United States

    Science.gov (United States)

    Hatfield, Jeffrey S.; Myrick, Kaci E.; Huston, Michael A.; Weckerly, Floyd W.; Green, M. Clay

    2013-01-01

    Given the estimates that species diversity is diminishing at 50-100 times the normal rate, it is critical that we be able to evaluate changes in species richness in order to make informed decisions for conserving species diversity. In this study, we examined the potential of vascular plant species richness to be used as a surrogate for vertebrate species richness in the classes of amphibians, reptiles, birds, and mammals. Vascular plants, as primary producers, represent the biotic starting point for ecological community structure and are the logical place to start for understanding vertebrate species associations. We used data collected by the United States (US) National Park Service (NPS) on species presence within parks in the eastern US to estimate simple linear regressions between plant species richness and vertebrate richness. Because environmental factors may also influence species diversity, we performed simple linear regressions of species richness versus natural logarithm of park area, park latitude, mean annual precipitation, mean annual temperature, and human population density surrounding the parks. We then combined plant species richness and environmental variables in multiple regressions to determine the variables that remained as significant predictors of vertebrate species richness. As expected, we detected significant relationships between plant species richness and amphibian, bird, and mammal species richness. In some cases, plant species richness was predicted by park area alone. Species richness of mammals was only related to plant species richness. Reptile species richness, on the other hand, was related to plant species richness, park latitude and annual precipitation, while amphibian species richness was related to park latitude, park area, and plant species richness. Thus, plant species richness predicted species richness of different vertebrate groups to varying degrees and should not be used exclusively as a surrogate for vertebrate

  8. Sexual selection predicts species richness across the animal kingdom.

    Science.gov (United States)

    Janicke, Tim; Ritchie, Michael G; Morrow, Edward H; Marie-Orleach, Lucas

    2018-05-16

    Our improving knowledge of the animal tree of life consistently demonstrates that some taxa diversify more rapidly than others, but what contributes to this variation remains poorly understood. An influential hypothesis proposes that selection arising from competition for mating partners plays a key role in promoting speciation. However, empirical evidence showing a link between proxies of this sexual selection and species richness is equivocal. Here, we collected standardized metrics of sexual selection for a broad range of animal taxa, and found that taxonomic families characterized by stronger sexual selection on males show relatively higher species richness. Thus, our data support the hypothesis that sexual selection elevates species richness. This could occur either by promoting speciation and/or by protecting species against extinction. © 2018 The Author(s).

  9. Global hotspots and correlates of alien species richness across taxonomic groups

    Science.gov (United States)

    Dawson, Wayne; Moser, Dietmar; van Kleunen, Mark; Kreft, Holger; Pergl, Jan; Pysek, Petr; Weigelt, Patrick; Winter, Marten; Lenzner, Bernd; Blackburn, Tim M.; Dyer, Ellie; Cassey, Phillip; Scrivens, Sally-Louise; Economo, Evan P.; Guenard, Benoit; Capinha, Cesar; Seebens, Hanno; Garcia-Diaz, Pablo; Nentwig, Wolfgang; Garcia-Berthou, Emili; Casal, Christine; Mandrak, Nicholas E.; Fuller, Pam; Meyer, Carsten; Essl, Franz

    2017-01-01

    Human-mediated transport beyond biogeographic barriers has led to the introduction and establishment of alien species in new regions worldwide. However, we lack a global picture of established alien species richness for multiple taxonomic groups. Here, we assess global patterns and potential drivers of established alien species richness across eight taxonomic groups (amphibians, ants, birds, freshwater fishes, mammals, vascular plants, reptiles and spiders) for 186 islands and 423 mainland regions. Hotspots of established alien species richness are predominantly island and coastal mainland regions. Regions with greater gross domestic product per capita, human population density, and area have higher established alien richness, with strongest effects emerging for islands. Ants and reptiles, birds and mammals, and vascular plants and spiders form pairs of taxonomic groups with the highest spatial congruence in established alien richness, but drivers explaining richness differ between the taxa in each pair. Across all taxonomic groups, our results highlight the need to prioritize prevention of further alien species introductions to island and coastal mainland regions globally.

  10. Can temporal and spatial NDVI predict regional bird-species richness?

    Directory of Open Access Journals (Sweden)

    Sebastián Nieto

    2015-01-01

    Full Text Available Understanding the distribution of the species and its controls over biogeographic scales is still a major challenge in ecology. National Park Networks provide an opportunity to assess the relationship between ecosystem functioning and biodiversity in areas with low human impacts. We tested the productivity–biodiversity hypothesis which states that the number of species increases with the available energy, and the ​variability–biodiversity hypothesis which states that the number of species increases with the diversity of habitats. The available energy and habitat heterogeneity estimated by the normalized difference vegetation index (NDVI was shown as a good predictor of bird-species richness for a diverse set of biomes in previously published studies. However, there is not a universal relationship between NDVI and bird-species richness. Here we tested if the NDVI can predict bird species richness in areas with low human impact in Argentina. Using a dataset from the National Park Network of Argentina we found that the best predictor of bird species richness was the minimum value of NDVI per year which explained 75% of total variability. The inclusion of the spatial heterogeneity of NDVI improved the explanation power to 80%. Minimum NDVI was highly correlated with precipitation and winter temperature. Our analysis provides a tool for assessing bird-species richness at scales on which land-use planning practitioners make their decisions for Southern South America.

  11. Models of alien species richness show moderate predictive accuracy and poor transferability

    Directory of Open Access Journals (Sweden)

    César Capinha

    2018-06-01

    Full Text Available Robust predictions of alien species richness are useful to assess global biodiversity change. Nevertheless, the capacity to predict spatial patterns of alien species richness remains largely unassessed. Using 22 data sets of alien species richness from diverse taxonomic groups and covering various parts of the world, we evaluated whether different statistical models were able to provide useful predictions of absolute and relative alien species richness, as a function of explanatory variables representing geographical, environmental and socio-economic factors. Five state-of-the-art count data modelling techniques were used and compared: Poisson and negative binomial generalised linear models (GLMs, multivariate adaptive regression splines (MARS, random forests (RF and boosted regression trees (BRT. We found that predictions of absolute alien species richness had a low to moderate accuracy in the region where the models were developed and a consistently poor accuracy in new regions. Predictions of relative richness performed in a superior manner in both geographical settings, but still were not good. Flexible tree ensembles-type techniques (RF and BRT were shown to be significantly better in modelling alien species richness than parametric linear models (such as GLM, despite the latter being more commonly applied for this purpose. Importantly, the poor spatial transferability of models also warrants caution in assuming the generality of the relationships they identify, e.g. by applying projections under future scenario conditions. Ultimately, our results strongly suggest that predictability of spatial variation in richness of alien species richness is limited. The somewhat more robust ability to rank regions according to the number of aliens they have (i.e. relative richness, suggests that models of aliens species richness may be useful for prioritising and comparing regions, but not for predicting exact species numbers.

  12. Testing the Relationships between Diversification, Species Richness, and Trait Evolution.

    Science.gov (United States)

    Kozak, Kenneth H; Wiens, John J

    2016-11-01

    Understanding which traits drive species diversification is essential for macroevolutionary studies and to understand patterns of species richness among clades. An important tool for testing if traits influence diversification is to estimate rates of net diversification for each clade, and then test for a relationship between traits and diversification rates among clades. However, this general approach has become very controversial. Numerous papers have now stated that it is inappropriate to analyze net diversification rates in groups in which clade richness is not positively correlated with clade age. Similarly, some have stated that variation in net diversification rates does not explain variation in species richness patterns among clades across the Tree of Life. Some authors have also suggested that strong correlations between richness and diversification rates are a statistical artifact and effectively inevitable. If this latter point is true, then correlations between richness and diversification rates would be uninformative (or even misleading) for identifying how much variation in species richness among clades is explained by variation in net diversification rates. Here, we use simulations (based on empirical data for plethodontid salamanders) to address three main questions. First, how is variation in net diversification rates among clades related to the relationship between clade age and species richness? Second, how accurate are these net diversification rate estimators, and does the age-richness relationship have any relevance to their accuracy? Third, is a relationship between species richness and diversification rates an inevitable, statistical artifact? Our simulations show that strong, positive age-richness relationships arise when diversification rates are invariant among clades, whereas realistic variation in diversification rates among clades frequently disrupts this relationship. Thus, a significant age-richness relationship should not be a

  13. Introduced Terrestrial Species Richness

    Data.gov (United States)

    U.S. Environmental Protection Agency — These data represent predicted current distributions of all introduced mammals, birds, reptiles, amphibians and butterflies in the Middle-Atlantic region. These data...

  14. The Effect of Host-Plant Phylogenetic Isolation on Species Richness, Composition and Specialization of Insect Herbivores: A Comparison between Native and Exotic Hosts.

    Directory of Open Access Journals (Sweden)

    Julio Miguel Grandez-Rios

    Full Text Available Understanding the drivers of plant-insect interactions is still a key issue in terrestrial ecology. Here, we used 30 well-defined plant-herbivore assemblages to assess the effects of host plant phylogenetic isolation and origin (native vs. exotic on the species richness, composition and specialization of the insect herbivore fauna on co-occurring plant species. We also tested for differences in such effects between assemblages composed exclusively of exophagous and endophagous herbivores. We found a consistent negative effect of the phylogenetic isolation of host plants on the richness, similarity and specialization of their insect herbivore faunas. Notably, except for Jaccard dissimilarity, the effect of phylogenetic isolation on the insect herbivore faunas did not vary between native and exotic plants. Our findings show that the phylogenetic isolation of host plants is a key factor that influences the richness, composition and specialization of their local herbivore faunas, regardless of the host plant origin.

  15. Diversification rates and species richness across the Tree of Life.

    Science.gov (United States)

    Scholl, Joshua P; Wiens, John J

    2016-09-14

    Species richness varies dramatically among clades across the Tree of Life, by over a million-fold in some cases (e.g. placozoans versus arthropods). Two major explanations for differences in richness among clades are the clade-age hypothesis (i.e. species-rich clades are older) and the diversification-rate hypothesis (i.e. species-rich clades diversify more rapidly, where diversification rate is the net balance of speciation and extinction over time). Here, we examine patterns of variation in diversification rates across the Tree of Life. We address how rates vary across higher taxa, whether rates within higher taxa are related to the subclades within them, and how diversification rates of clades are related to their species richness. We find substantial variation in diversification rates, with rates in plants nearly twice as high as in animals, and rates in some eukaryotes approximately 10-fold faster than prokaryotes. Rates for each kingdom-level clade are then significantly related to the subclades within them. Although caution is needed when interpreting relationships between diversification rates and richness, a positive relationship between the two is not inevitable. We find that variation in diversification rates seems to explain most variation in richness among clades across the Tree of Life, in contrast to the conclusions of previous studies. © 2016 The Author(s).

  16. Detection of Wolbachia (Alphaproteobacteria: rickettsiales in three species of terrestrial isopods (crustacea: isopoda: oniscidea in Brazil

    Directory of Open Access Journals (Sweden)

    Bianca Laís Zimmermann

    2012-06-01

    Full Text Available Terrestrial isopods are widely infected with Wolbachia. However, little is known about the presence of bacteria in the Neotropical species. The objective of this study was to test the hypothesis of presence of Wolbachia infection in the native species of terrestrial isopods, Atlantoscia floridana and Circoniscus bezzii, and in the introduced species Burmoniscus meeusei.

  17. Enhancement of local species richness in tundra by seed dispersal through guts of muskox and barnacle goose

    DEFF Research Database (Denmark)

    Bruun, Hans Henrik; Lundgren, Rebekka; Philipp, Marianne

    2008-01-01

    The potential contribution of vertebrate-mediated seed rain to the maintenance of plant community richness in a High Arctic ecosystem was investigated. We analyzed viable seed content in dung of the four numerically most important terrestrial vertebrates in Northeast Greenland - muskox (Ovibos...... moschatus), barnacle goose (Branta leucopsis), Arctic fox (Alopex lagopus) and Arctic hare (Lepus arcticus). High numbers of plant propagules were found in the dung of muskox and barnacle goose. Seeds of many plant species were found in the faeces of one vertebrate species only. Propagule composition...... in barnacle goose droppings was relatively uniform over samples, with a high abundance of the nutritious bulbils of Polygonum viviparum (Bistorta vivipara), suggesting that geese have a narrow habitat preference and feed selectively. Propagule composition in muskox dung was diverse and heterogeneous among...

  18. Context-dependent interactions and the regulation of species richness in freshwater fish

    Science.gov (United States)

    MacDougall, Andrew S.; Harvey, Eric; McCune, Jenny L.; Nilsson, Karin A.; Bennett, Joseph; Firn, Jennifer; Bartley, Timothy; Grace, James B.; Kelly, Jocelyn; Tunney, Tyler D.; McMeans, Bailey; Matsuzaki, Shin-Ichiro S.; Kadoya, Taku; Esch, Ellen; Cazelles, Kevin; Lester, Nigel; McCann, Kevin S.

    2018-01-01

    Species richness is regulated by a complex network of scale-dependent processes. This complexity can obscure the influence of limiting species interactions, making it difficult to determine if abiotic or biotic drivers are more predominant regulators of richness. Using integrative modeling of freshwater fish richness from 721 lakes along an 11olatitudinal gradient, we find negative interactions to be a relatively minor independent predictor of species richness in lakes despite the widespread presence of predators. Instead, interaction effects, when detectable among major functional groups and 231 species pairs, were strong, often positive, but contextually dependent on environment. These results are consistent with the idea that negative interactions internally structure lake communities but do not consistently ‘scale-up’ to regulate richness independently of the environment. The importance of environment for interaction outcomes and its role in the regulation of species richness highlights the potential sensitivity of fish communities to the environmental changes affecting lakes globally.

  19. Predicting continental-scale patterns of bird species richness with spatially explicit models

    DEFF Research Database (Denmark)

    Rahbek, Carsten; Gotelli, Nicholas J; Colwell, Robert K

    2007-01-01

    the extraordinary diversity of avian species in the montane tropics, the most species-rich region on Earth. Our findings imply that correlative climatic models substantially underestimate the importance of historical factors and small-scale niche-driven assembly processes in shaping contemporary species-richness......The causes of global variation in species richness have been debated for nearly two centuries with no clear resolution in sight. Competing hypotheses have typically been evaluated with correlative models that do not explicitly incorporate the mechanisms responsible for biotic diversity gradients....... Here, we employ a fundamentally different approach that uses spatially explicit Monte Carlo models of the placement of cohesive geographical ranges in an environmentally heterogeneous landscape. These models predict species richness of endemic South American birds (2248 species) measured...

  20. Water loss from terrestrial planets with CO{sub 2}-rich atmospheres

    Energy Technology Data Exchange (ETDEWEB)

    Wordsworth, R. D.; Pierrehumbert, R. T., E-mail: rwordsworth@uchicago.edu [Department of the Geophysical Sciences, University of Chicago, 60637 IL (United States)

    2013-12-01

    Water photolysis and hydrogen loss from the upper atmospheres of terrestrial planets is of fundamental importance to climate evolution but remains poorly understood in general. Here we present a range of calculations we performed to study the dependence of water loss rates from terrestrial planets on a range of atmospheric and external parameters. We show that CO{sub 2} can only cause significant water loss by increasing surface temperatures over a narrow range of conditions, with cooling of the middle and upper atmosphere acting as a bottleneck on escape in other circumstances. Around G-stars, efficient loss only occurs on planets with intermediate CO{sub 2} atmospheric partial pressures (0.1-1 bar) that receive a net flux close to the critical runaway greenhouse limit. Because G-star total luminosity increases with time but X-ray and ultraviolet/ultravoilet luminosity decreases, this places strong limits on water loss for planets like Earth. In contrast, for a CO{sub 2}-rich early Venus, diffusion limits on water loss are only important if clouds caused strong cooling, implying that scenarios where the planet never had surface liquid water are indeed plausible. Around M-stars, water loss is primarily a function of orbital distance, with planets that absorb less flux than ∼270 W m{sup –2} (global mean) unlikely to lose more than one Earth ocean of H{sub 2}O over their lifetimes unless they lose all their atmospheric N{sub 2}/CO{sub 2} early on. Because of the variability of H{sub 2}O delivery during accretion, our results suggest that many 'Earth-like' exoplanets in the habitable zone may have ocean-covered surfaces, stable CO{sub 2}/H{sub 2}O-rich atmospheres, and high mean surface temperatures.

  1. Plant species richness and ecosystem multifunctionality in global drylands

    Science.gov (United States)

    Maestre, Fernando T.; Quero, Jose L.; Gotelli, Nicholas J.; Escudero, Adrian; Ochoa, Victoria; Delgado-Baquerizo, Manuel; Garcia-Gomez, Miguel; Bowker, Matthew A.; Soliveres, Santiago; Escolar, Cristina; Garcia-Palacios, Pablo; Berdugo, Miguel; Valencia, Enrique; Gozalo, Beatriz; Gallardo, Antonio; Aguilera, Lorgio; Arredondo, Tulio; Blones, Julio; Boeken, Bertrand; Bran, Donaldo; Conceicao, Abel A.; Cabrera, Omar; Chaieb, Mohamed; Derak, Mchich; Eldridge, David J.; Espinosa, Carlos I.; Florentino, Adriana; Gaitan, Juan; Gatica, M. Gabriel; Ghiloufi, Wahida; Gomez-Gonzalez, Susana; Gutie, Julio R.; Hernandez, Rosa M.; Huang, Xuewen; Huber-Sannwald, Elisabeth; Jankju, Mohammad; Miriti, Maria; Monerris, Jorge; Mau, Rebecca L.; Morici, Ernesto; Naseri, Kamal; Ospina, Abelardo; Polo, Vicente; Prina, Anibal; Pucheta, Eduardo; Ramirez-Collantes, David A.; Romao, Roberto; Tighe, Matthew; Torres-Diaz, Cristian; Val, James; Veiga, Jose P.; Wang, Deli; Zaady, Eli

    2012-01-01

    Experiments suggest that biodiversity enhances the ability of ecosystems to maintain multiple functions, such as carbon storage, productivity, and the buildup of nutrient pools (multifunctionality). However, the relationship between biodiversity and multifunctionality has never been assessed globally in natural ecosystems. We report here on a global empirical study relating plant species richness and abiotic factors to multifunctionality in drylands, which collectively cover 41% of Earth's land surface and support over 38% of the human population. Multifunctionality was positively and significantly related to species richness. The best-fitting models accounted for over 55% of the variation in multifunctionality and always included species richness as a predictor variable. Our results suggest that the preservation of plant biodiversity is crucial to buffer negative effects of climate change and desertification in drylands.

  2. Patterns of coral species richness and reef connectivity in Malaysia

    NARCIS (Netherlands)

    Waheed, Z.

    2016-01-01

    Much remains to be discovered about the biodiversity of coral reefs in Malaysia, making this area a priority for coral reef research. This thesis aims to provide insights into the patterns of reef coral species richness and the degree of reef connectivity across Malaysia. For the species richness

  3. Combining geodiversity with climate and topography to account for threatened species richness.

    Science.gov (United States)

    Tukiainen, Helena; Bailey, Joseph J; Field, Richard; Kangas, Katja; Hjort, Jan

    2017-04-01

    Understanding threatened species diversity is important for long-term conservation planning. Geodiversity-the diversity of Earth surface materials, forms, and processes-may be a useful biodiversity surrogate for conservation and have conservation value itself. Geodiversity and species richness relationships have been demonstrated; establishing whether geodiversity relates to threatened species' diversity and distribution pattern is a logical next step for conservation. We used 4 geodiversity variables (rock-type and soil-type richness, geomorphological diversity, and hydrological feature diversity) and 4 climatic and topographic variables to model threatened species diversity across 31 of Finland's national parks. We also analyzed rarity-weighted richness (a measure of site complementarity) of threatened vascular plants, fungi, bryophytes, and all species combined. Our 1-km 2 resolution data set included 271 threatened species from 16 major taxa. We modeled threatened species richness (raw and rarity weighted) with boosted regression trees. Climatic variables, especially the annual temperature sum above 5 °C, dominated our models, which is consistent with the critical role of temperature in this boreal environment. Geodiversity added significant explanatory power. High geodiversity values were consistently associated with high threatened species richness across taxa. The combined effect of geodiversity variables was even more pronounced in the rarity-weighted richness analyses (except for fungi) than in those for species richness. Geodiversity measures correlated most strongly with species richness (raw and rarity weighted) of threatened vascular plants and bryophytes and were weakest for molluscs, lichens, and mammals. Although simple measures of topography improve biodiversity modeling, our results suggest that geodiversity data relating to geology, landforms, and hydrology are also worth including. This reinforces recent arguments that conserving nature's stage

  4. A unified model of avian species richness on islands and continents.

    Science.gov (United States)

    Kalmar, Attila; Currie, David J

    2007-05-01

    How many species in a given taxon should be found in a delimited area in a specified place in the world? Some recent literature suggests that the answer to this question depends strongly on the geographical, evolutionary, and ecological context. For example, current theory suggests that species accumulate as a function of area differently on continents and islands. Species richness-climate relationships have been examined separately on continents and on islands. This study tests the hypotheses that (1) the functional relationship between richness and climate is the same on continents and islands; (2) the species-area slope depends on distance-based isolation; (3) species-area relationships differ among land bridge islands, oceanic islands, and continents; (4) richness differs among biogeographic regions independently of climate and isolation. We related bird species numbers in a worldwide sample of 240 continental parcels and 346 islands to several environmental variables. We found that breeding bird richness varies similarly on islands and on continents as a function of mean annual temperature, an area x precipitation interaction, and the distance separating insular samples from the nearest continent (R2 = 0.86). Most studies to date have postulated that the slope of the species-area relationship depends upon isolation. In contrast, we found no such interaction. A richness-environment relationship derived using Old World sites accurately predicts patterns of richness in the New World and vice versa (R2 = 0.85). Our results suggest that most of the global variation in richness is not strongly context-specific; rather, it reflects a small number of general environmental constraints operating on both continents and islands.

  5. Species richness of vascular plants, bryophytes, and lichens along an altitudinal gradient in western Norway

    Science.gov (United States)

    Grytnes, John Arvid; Heegaard, Einar; Ihlen, Per G.

    2006-05-01

    Species richness patterns of ground-dwelling vascular plants, bryophytes, and lichens were compared along an altitudinal gradient (310-1135 m a.s.l.), in western Norway. Total species richness peaked at intermediate altitudes, vascular plant species richness peaked immediately above the forest limit (at 600-700 m a.s.l.), bryophyte species richness had no statistically significant trend, whereas lichen richness increased from the lowest point and up to the forest limit, with no trend above. It is proposed that the pattern in vascular plant species richness is enhanced by an ecotone effect. Bryophyte species richness responds to local scale factors whereas the lichen species richness may be responding to the shading from the forest trees.

  6. Determinants of Mammal and Bird Species Richness in China Based on Habitat Groups.

    Directory of Open Access Journals (Sweden)

    Haigen Xu

    Full Text Available Understanding the spatial patterns in species richness is a central issue in macroecology and biogeography. Analyses that have traditionally focused on overall species richness limit the generality and depth of inference. Spatial patterns of species richness and the mechanisms that underpin them in China remain poorly documented. We created a database of the distribution of 580 mammal species and 849 resident bird species from 2376 counties in China and established spatial linear models to identify the determinants of species richness and test the roles of five hypotheses for overall mammals and resident birds and the 11 habitat groups among the two taxa. Our result showed that elevation variability was the most important determinant of species richness of overall mammal and bird species. It is indicated that the most prominent predictors of species richness varied among different habitat groups: elevation variability for forest and shrub mammals and birds, temperature annual range for grassland and desert mammals and wetland birds, net primary productivity for farmland mammals, maximum temperature of the warmest month for cave mammals, and precipitation of the driest quarter for grassland and desert birds. Noteworthily, main land cover type was also found to obviously influence mammal and bird species richness in forests, shrubs and wetlands under the disturbance of intensified human activities. Our findings revealed a substantial divergence in the species richness patterns among different habitat groups and highlighted the group-specific and disparate environmental associations that underpin them. As we demonstrate, a focus on overall species richness alone might lead to incomplete or misguided understanding of spatial patterns. Conservation priorities that consider a broad spectrum of habitat groups will be more successful in safeguarding the multiple services of biodiversity.

  7. Spitzer IRS Spectroscopy of the 10 Myr-Old EF Cha Debris Disk: Evidence for Phyllosilicate-Rich Dust in the Terrestrial Zone

    Science.gov (United States)

    Currie, Thayne; Lisse, Carey M.; Sicillia-Aguilar, Aurora; Rieke, George H.; Su, Kate Y. L.

    2011-01-01

    We describe Spitzer IRS spectroscopic observations of the approx. 10 Myr-old star, EF Chao Compositional modeling of the spectra from 5 micron to 35 micron confirms that it is surrounded by a luminous debris disk with L(sub D)/L(sub *) approx. 10(exp -3), containing dust with temperatures between 225 K and 430 K characteristic of the terrestrial zone. The EF Cha spectrum shows evidence for many solid-state features, unlike most cold, low-luminosity debris disks but like some other 10-20 Myr-old luminous, warm debris disks (e.g. HD 113766A). The EF Cha debris disk is unusually rich in a species or combination of species whose emissivities resemble that of finely-powdered, laboratory-measured phyllosilicate species (talc, saponite, and smectite), which are likely produced by aqueous alteration of primordial anhydrous rocky materials. The dust and, by inference, the parent bodies of the debris also contain abundant amorphous silicates and metal sulfides, and possibly water ice. The dust's total olivine to pyroxene ratio of approx. 2 also provides evidence of aqueous alteration. The large mass volume of grains with sizes comparable to or below the radiation blow-out limit implies that planetesimals may be colliding at a rate high enough to yield the emitting dust but not so high as to devolatize the planetesimals via impact processing. Because phyllosilicates are produced by the interactions between anhydrous rock and warm, reactive water, EF Cha's disk is a likely signpost for water delivery to the terrestrial zone of a young planetary system.

  8. Plant Size as Determinant of Species Richness of Herbivores, Natural Enemies and Pollinators across 21 Brassicaceae Species.

    Directory of Open Access Journals (Sweden)

    Hella Schlinkert

    Full Text Available Large plants are often more conspicuous and more attractive for associated animals than small plants, e.g. due to their wider range of resources. Therefore, plant size can positively affect species richness of associated animals, as shown for single groups of herbivores, but studies usually consider intraspecific size differences of plants in unstandardised environments. As comprehensive tests of interspecific plant size differences under standardised conditions are missing so far, we investigated effects of plant size on species richness of all associated arthropods using a common garden experiment with 21 Brassicaceae species covering a broad interspecific plant size gradient from 10 to 130 cm height. We recorded plant associated ecto- and endophagous herbivores, their natural enemies and pollinators on and in each aboveground plant organ, i.e. flowers, fruits, leaves and stems. Plant size (measured as height from the ground, the number of different plant organ entities and their biomass were assessed. Increasing plant size led to increased species richness of associated herbivores, natural enemies and pollinating insects. This pattern was found for ectophagous and endophagous herbivores, their natural enemies, as well as for herbivores associated with leaves and fruits and their natural enemies, independently of the additional positive effects of resource availability (i.e. organ biomass or number of entities and, regarding natural enemies, herbivore species richness. We found a lower R2 for pollinators compared to herbivores and natural enemies, probably caused by the high importance of flower characteristics for pollinator species richness besides plant size. Overall, the increase in plant height from 10 to 130 cm led to a 2.7-fold increase in predicted total arthropod species richness. In conclusion, plant size is a comprehensive driver of species richness of the plant associated arthropods, including pollinators, herbivores and their

  9. Multiscale perspectives of species richness in East Africa

    NARCIS (Netherlands)

    Said, M.

    2003-01-01

    This dissertation describes and analyses animal species richness in East Africa from a multi-scale perspective. We studied diversity patterns at sub-continental, national and sub-national level. The study demonstrated that species diversity patterns were scale-dependent. Diversity patterns varied

  10. Canopy cover negatively affects arboreal ant species richness in a tropical open habitat

    Directory of Open Access Journals (Sweden)

    A. C. M. Queiroz

    Full Text Available Abstract We tested the hypothesis of a negative relationship between vegetation characteristics and ant species richness in a Brazilian open vegetation habitat, called candeial. We set up arboreal pitfalls to sample arboreal ants and measured the following environmental variables, which were used as surrogate of environmental heterogeneity: tree richness, tree density, tree height, circumference at the base of the plants, and canopy cover. Only canopy cover had a negative effect on the arboreal ant species richness. Vegetation characteristics and plant species composition are probably homogeneous in candeial, which explains the lack of relationship between other environmental variables and ant richness. Open vegetation habitats harbor a large number of opportunistic and generalist species, besides specialist ants from habitats with high temperatures. An increase in canopy cover decreases sunlight incidence and may cause local microclimatic differences, which negatively affect the species richness of specialist ants from open areas. Canopy cover regulates the richness of arboreal ants in open areas, since only few ant species are able to colonize sites with dense vegetation; most species are present in sites with high temperature and luminosity. Within open vegetation habitats the relationship between vegetation characteristics and species richness seems to be the opposite from closed vegetation areas, like forests.

  11. Local versus landscape-scale effects of anthropogenic land-use on forest species richness

    Science.gov (United States)

    Buffa, G.; Del Vecchio, S.; Fantinato, E.; Milano, V.

    2018-01-01

    The study investigated the effects of human-induced landscape patterns on species richness in forests. For 80 plots of fixed size, we measured human disturbance (categorized as urban/industrial and agricultural land areas), at 'local' and 'landscape' scale (500 m and 2500 m radius from each plot, respectively), the distance from the forest edge, and the size and shape of the woody patch. By using GLM, we analyzed the effects of disturbance and patch-based measures on both total species richness and the richness of a group of specialist species (i.e. the 'ancient forest species'), representing more specific forest features. Patterns of local species richness were sensitive to the structure and composition of the surrounding landscape. Among the landscape components taken into account, urban/industrial land areas turned out as the most threatening factor for both total species richness and the richness of the ancient forest species. However, the best models evidenced a different intensity of the response to the same disturbance category as well as a different pool of significant variables for the two groups of species. The use of groups of species, such as the ancient forest species pool, that are functionally related and have similar ecological requirements, may represent an effective solution for monitoring forest dynamics under the effects of external factors. The approach of relating local assessment of species richness, and in particular of the ancient forest species pool, to land-use patterns may play an important role for the science-policy interface by supporting and strengthening conservation and regional planning decision making.

  12. Biogeography of species richness gradients : Linking adaptive traits, demography and diversification

    NARCIS (Netherlands)

    Carnicer, Jofre; Brotons, Lluis; Stefanescu, Constanti; Penuelas, Josep

    Here we review how adaptive traits contribute to the emergence and maintenance of species richness gradients through their influence on demographic and diversification processes. We start by reviewing how demographic dynamics change along species richness gradients. Empirical studies show that

  13. Estimation of the species richness of fish parasite fauna: an ecological approach

    Directory of Open Access Journals (Sweden)

    Ieshko Evgeny Pavlovich

    2012-12-01

    Full Text Available We studied the biological diversity of the parasite fauna in pike from four habitats found in northern lakes of Karelia. The curves of the expected species richness versus sampling effort (the number of examined specimens dependency were plotted. A universal approach to the description of the new species replenishment dynamics is proposed – including finding (through combinatorial analysis the median value between the fastest and the slowest paths of the species richness growth followed by approximation using logistic function . Our analysis showed that the leading ecological factors controlling the formation of the parasite species richness in a specific waterbody are the richness of infracommunities and the age composition of the host sample. The sample of 15 host specimens contains at least 80% of all species in the parasite community.

  14. Species richness in soil bacterial communities: a proposed approach to overcome sample size bias.

    Science.gov (United States)

    Youssef, Noha H; Elshahed, Mostafa S

    2008-09-01

    Estimates of species richness based on 16S rRNA gene clone libraries are increasingly utilized to gauge the level of bacterial diversity within various ecosystems. However, previous studies have indicated that regardless of the utilized approach, species richness estimates obtained are dependent on the size of the analyzed clone libraries. We here propose an approach to overcome sample size bias in species richness estimates in complex microbial communities. Parametric (Maximum likelihood-based and rarefaction curve-based) and non-parametric approaches were used to estimate species richness in a library of 13,001 near full-length 16S rRNA clones derived from soil, as well as in multiple subsets of the original library. Species richness estimates obtained increased with the increase in library size. To obtain a sample size-unbiased estimate of species richness, we calculated the theoretical clone library sizes required to encounter the estimated species richness at various clone library sizes, used curve fitting to determine the theoretical clone library size required to encounter the "true" species richness, and subsequently determined the corresponding sample size-unbiased species richness value. Using this approach, sample size-unbiased estimates of 17,230, 15,571, and 33,912 were obtained for the ML-based, rarefaction curve-based, and ACE-1 estimators, respectively, compared to bias-uncorrected values of 15,009, 11,913, and 20,909.

  15. Species richness of motile cryptofauna across a gradient of reef framework erosion

    Science.gov (United States)

    Enochs, I. C.; Manzello, D. P.

    2012-09-01

    Coral reef ecosystems contain exceptionally high concentrations of marine biodiversity, potentially encompassing millions of species. Similar to tropical rainforests and their insects, the majority of reef animal species are small and cryptic, living in the cracks and crevices of structural taxa (trees and corals). Although the cryptofauna make up the majority of a reef's metazoan biodiversity, we know little about their basic ecology. We sampled motile cryptofaunal communities from both live corals and dead carbonate reef framework across a gradient of increasing erosion on a reef in Pacific Panamá. A total of 289 Operational Taxonomic Units (OTUs) from six phyla were identified. We used species-accumulation models fitted to individual- and sample-based rarefaction curves, as well as seven nonparametric richness estimators to estimate species richness among the different framework types. All procedures predicted the same trends in species richness across the differing framework types. Estimated species richness was higher in dead framework (261-370 OTUs) than in live coral substrates (112-219 OTUs). Surprisingly, richness increased as framework structure was eroded: coral rubble contained the greatest number of species (227-320 OTUs) and the lowest estimated richness of 47-115 OTUs was found in the zone where the reef framework had the greatest vertical relief. This contradicts the paradigm that abundant live coral indicates the apex of reef diversity.

  16. Potential Environmental and Ecological Effects of Global Climate Change on Venomous Terrestrial Species in the Wilderness.

    Science.gov (United States)

    Needleman, Robert K; Neylan, Isabelle P; Erickson, Timothy

    2018-06-01

    Climate change has been scientifically documented, and its effects on wildlife have been prognosticated. We sought to predict the overall impact of climate change on venomous terrestrial species. We hypothesize that given the close relationship between terrestrial venomous species and climate, a changing global environment may result in increased species migration, geographical redistribution, and longer seasons for envenomation, which would have repercussions on human health. A retrospective analysis of environmental, ecological, and medical literature was performed with a focus on climate change, toxinology, and future modeling specific to venomous terrestrial creatures. Species included venomous reptiles, snakes, arthropods, spiders, and Hymenoptera (ants and bees). Animals that are vectors of hemorrhagic infectious disease (eg, mosquitos, ticks) were excluded. Our review of the literature indicates that changes to climatic norms will have a potentially dramatic effect on terrestrial venomous creatures. Empirical evidence demonstrates that geographic distributions of many species have already shifted due to changing climatic conditions. Given that most terrestrial venomous species are ectotherms closely tied to ambient temperature, and that climate change is shifting temperature zones away from the equator, further significant distribution and population changes should be anticipated. For those species able to migrate to match the changing temperatures, new geographical locations may open. For those species with limited distribution capabilities, the rate of climate change may accelerate faster than species can adapt, causing population declines. Specifically, poisonous snakes and spiders will likely maintain their population numbers but will shift their geographic distribution to traditionally temperate zones more often inhabited by humans. Fire ants and Africanized honey bees are expected to have an expanded range distribution due to predicted warming trends

  17. Plant species richness enhances nitrogen retention in green roof plots.

    Science.gov (United States)

    Johnson, Catherine; Schweinhart, Shelbye; Buffam, Ishi

    2016-10-01

    Vegetated (green) roofs have become common in many cities and are projected to continue to increase in coverage, but little is known about the ecological properties of these engineered ecosystems. In this study, we tested the biodiversity-ecosystem function hypothesis using commercially available green roof trays as replicated plots with varying levels of plant species richness (0, 1, 3, or 6 common green roof species per plot, using plants with different functional characteristics). We estimated accumulated plant biomass near the peak of the first full growing season (July 2013) and measured runoff volume after nearly every rain event from September 2012 to September 2013 (33 events) and runoff fluxes of inorganic nutrients ammonium, nitrate, and phosphate from a subset of 10 events. We found that (1) total plant biomass increased with increasing species richness, (2) green roof plots were effective at reducing storm runoff, with vegetation increasing water retention more than soil-like substrate alone, but there was no significant effect of plant species identity or richness on runoff volume, (3) green roof substrate was a significant source of phosphate, regardless of presence/absence of plants, and (4) dissolved inorganic nitrogen (DIN = nitrate + ammonium) runoff fluxes were different among plant species and decreased significantly with increasing plant species richness. The variation in N retention was positively related to variation in plant biomass. Notably, the increased biomass and N retention with species richness in this engineered ecosystem are similar to patterns observed in published studies from grasslands and other well-studied ecosystems. We suggest that more diverse plantings on vegetated roofs may enhance the retention capacity for reactive nitrogen. This is of importance for the sustained health of vegetated roof ecosystems, which over time often experience nitrogen limitation, and is also relevant for water quality in receiving waters

  18. Global variation in woodpecker species richness shaped by tree availability

    DEFF Research Database (Denmark)

    Ilsoe, Sigrid Kistrup; Kissling, W. Daniel; Fjeldsa, Jon

    2017-01-01

    . Location: Global. Methods: We used spatial and non-spatial regressions to test for relationships between broad-scale woodpecker species richness and predictor variables describing current and deep-time availability of trees, current climate, Quaternary climate change, human impact, topographical...... a negative indirect effect on woodpecker species richness. Main conclusions: Global species richness of woodpeckers is primarily shaped by current tree cover and precipitation, reflecting a strong biotic association between woodpeckers and trees. Human influence can have a negative effect on woodpecker....... As an example, woodpeckers (Picidae) are closely associated with trees and woody habitats because of multiple morphological and ecological specializations. In this study, we test whether this strong biotic association causes woodpecker diversity to be closely linked to tree availability at a global scale...

  19. Species richness and trophic diversity increase decomposition in a co-evolved food web.

    Directory of Open Access Journals (Sweden)

    Benjamin Baiser

    Full Text Available Ecological communities show great variation in species richness, composition and food web structure across similar and diverse ecosystems. Knowledge of how this biodiversity relates to ecosystem functioning is important for understanding the maintenance of diversity and the potential effects of species losses and gains on ecosystems. While research often focuses on how variation in species richness influences ecosystem processes, assessing species richness in a food web context can provide further insight into the relationship between diversity and ecosystem functioning and elucidate potential mechanisms underpinning this relationship. Here, we assessed how species richness and trophic diversity affect decomposition rates in a complete aquatic food web: the five trophic level web that occurs within water-filled leaves of the northern pitcher plant, Sarracenia purpurea. We identified a trophic cascade in which top-predators--larvae of the pitcher-plant mosquito--indirectly increased bacterial decomposition by preying on bactivorous protozoa. Our data also revealed a facultative relationship in which larvae of the pitcher-plant midge increased bacterial decomposition by shredding detritus. These important interactions occur only in food webs with high trophic diversity, which in turn only occur in food webs with high species richness. We show that species richness and trophic diversity underlie strong linkages between food web structure and dynamics that influence ecosystem functioning. The importance of trophic diversity and species interactions in determining how biodiversity relates to ecosystem functioning suggests that simply focusing on species richness does not give a complete picture as to how ecosystems may change with the loss or gain of species.

  20. Determinants of species richness patterns in the Netherlands across multiple taxonomic groups

    NARCIS (Netherlands)

    Schouten, M.A.; Verweij, P.A.; Barendrecht, A.; Kleukers, R.

    2009-01-01

    We examined the species richness patterns of five different species groups (mosses, reptiles and amphibians, grasshoppers and crickets, dragonflies, and hoverflies) in the Netherlands (41,500 km2) using sampling units of 5 × 5 km. We compared the spatial patterns of species richness of the five

  1. Scale effects and human impact on the elevational species richness gradients

    DEFF Research Database (Denmark)

    Nogues, David Bravo; Araújo, M B; Romdal, T

    2008-01-01

    ), the derived species richness pattern changed progressively from hump-shaped to a monotonic pattern as the scale of extent diminished. Scale effects alone gave rise to as many conflicting patterns of species richness as had previously been reported in the literature, and scale effects lent significantly...

  2. Species richness and occupancy estimation in communities subject to temporary emigration

    Science.gov (United States)

    Kery, M.; Royle, J. Andrew; Plattner, M.; Dorazio, R.M.

    2009-01-01

    Species richness is the most common biodiversity metric, although typically some species remain unobserved. Therefore, estimates of species richness and related quantities should account for imperfect detectability. Community dynamics can often be represented as superposition of species-specific phenologies (e. g., in taxa with well-defined flight [insects], activity [rodents], or vegetation periods [plants]). We develop a model for such predictably open communities wherein species richness is expressed as the sum over observed and unobserved species of estimated species-specific and site-specific occurrence indicators and where seasonal occurrence is modeled as a species-specific function of time. Our model is a multispecies extension of a multistate model with one unobservable state and represents a parsimonious way of dealing with a widespread form of 'temporary emigration.'' For illustration we use Swiss butterfly monitoring data collected under a robust design (RD); species were recorded on 13 transects during two secondary periods within data, where secondary samples are pooled. The latter model yielded unrealistically high estimates of total community size of 274 species. In contrast, estimates were similar under models applied to RD data with constant (122) or seasonally varying (126) detectability for each species, but the former was more parsimonious and therefore used for inference. Per transect, 6 44 (mean 21.1) species were detected. Species richness estimates averaged 29.3; therefore only 71% (range 32-92%) of all species present were ever detected. In any primary period, 0.4-5.6 species present were overlooked. Detectability varied by species and averaged 0.88 per primary sampling period. Our modeling framework is extremely flexible; extensions such as covariates for the occurrence or detectability of individual species are easy. It should be useful for communities with a predictable form of temporary emigration where rigorous estimation of community

  3. Does resource availability, resource heterogeneity or species turnover mediate changes in plant species richness in grazed grasslands?

    NARCIS (Netherlands)

    Bakker, C; Blair, JM; Knapp, AK

    2003-01-01

    Grazing by large ungulates often increases plant species richness in grasslands of moderate to high productivity. In a mesic North American grassland with and without the presence of bison (Bos bison), a native ungulate grazer, three non-exclusive hypotheses for increased plant species richness in

  4. Kleptoparasitic behavior and species richness at Mt. Graham red squirrel middens

    Science.gov (United States)

    Andrew J. Edelman; John L. Koprowski; Jennifer L. Edelman

    2005-01-01

    We used remote photography to assess the frequency of inter- and intra-specific kleptoparasitism and species richness at Mt. Graham red squirrel (Tamiasciurus hudsonicus grahamensis) middens. Remote cameras and conifer cones were placed at occupied and unoccupied middens, and random sites. Species richness of small mammals was higher at red squirrel...

  5. Species associations in a species-rich subtropical forest were not well-explained by stochastic geometry of biodiversity.

    Science.gov (United States)

    Wang, Qinggang; Bao, Dachuan; Guo, Yili; Lu, Junmeng; Lu, Zhijun; Xu, Yaozhan; Zhang, Kuihan; Liu, Haibo; Meng, Hongjie; Jiang, Mingxi; Qiao, Xiujuan; Huang, Handong

    2014-01-01

    The stochastic dilution hypothesis has been proposed to explain species coexistence in species-rich communities. The relative importance of the stochastic dilution effects with respect to other effects such as competition and habitat filtering required to be tested. In this study, using data from a 25-ha species-rich subtropical forest plot with a strong topographic structure at Badagongshan in central China, we analyzed overall species associations and fine-scale species interactions between 2,550 species pairs. The result showed that: (1) the proportion of segregation in overall species association analysis at 2 m neighborhood in this plot followed the prediction of the stochastic dilution hypothesis that segregations should decrease with species richness but that at 10 m neighborhood was higher than the prediction. (2) The proportion of no association type was lower than the expectation of stochastic dilution hypothesis. (3) Fine-scale species interaction analyses using Heterogeneous Poisson processes as null models revealed a high proportion (47%) of significant species effects. However, the assumption of separation of scale of this method was not fully met in this plot with a strong fine-scale topographic structure. We also found that for species within the same families, fine-scale positive species interactions occurred more frequently and negative ones occurred less frequently than expected by chance. These results suggested effects of environmental filtering other than species interaction in this forest. (4) We also found that arbor species showed a much higher proportion of significant fine-scale species interactions (66%) than shrub species (18%). We concluded that the stochastic dilution hypothesis only be partly supported and environmental filtering left discernible spatial signals in the spatial associations between species in this species-rich subtropical forest with a strong topographic structure.

  6. Species associations in a species-rich subtropical forest were not well-explained by stochastic geometry of biodiversity.

    Directory of Open Access Journals (Sweden)

    Qinggang Wang

    Full Text Available The stochastic dilution hypothesis has been proposed to explain species coexistence in species-rich communities. The relative importance of the stochastic dilution effects with respect to other effects such as competition and habitat filtering required to be tested. In this study, using data from a 25-ha species-rich subtropical forest plot with a strong topographic structure at Badagongshan in central China, we analyzed overall species associations and fine-scale species interactions between 2,550 species pairs. The result showed that: (1 the proportion of segregation in overall species association analysis at 2 m neighborhood in this plot followed the prediction of the stochastic dilution hypothesis that segregations should decrease with species richness but that at 10 m neighborhood was higher than the prediction. (2 The proportion of no association type was lower than the expectation of stochastic dilution hypothesis. (3 Fine-scale species interaction analyses using Heterogeneous Poisson processes as null models revealed a high proportion (47% of significant species effects. However, the assumption of separation of scale of this method was not fully met in this plot with a strong fine-scale topographic structure. We also found that for species within the same families, fine-scale positive species interactions occurred more frequently and negative ones occurred less frequently than expected by chance. These results suggested effects of environmental filtering other than species interaction in this forest. (4 We also found that arbor species showed a much higher proportion of significant fine-scale species interactions (66% than shrub species (18%. We concluded that the stochastic dilution hypothesis only be partly supported and environmental filtering left discernible spatial signals in the spatial associations between species in this species-rich subtropical forest with a strong topographic structure.

  7. Freshwater fishes in Greek lakes: Species richness and body size patterns

    Directory of Open Access Journals (Sweden)

    Anthi Oikonomou

    2015-11-01

    Full Text Available Freshwater ecosystems are widely recognised as hotspots of biodiversity and endemism; thus they are of great value for conservation biogeography. Amongst the taxa found in freshwater ecosystems, fish are the ideal biological model for testing biogeographical patterns and have often been used in large-scale ecological and biogeographical analyses. Lakes of Greece provide a unique opportunity to test biogeographical theories, however, biogeographical studies in Greece at broader, regional, scales, based on the distribution of freshwater species, species richness and endemism, are scarce. The aim of the current study is to test the effect of key environmental factors and spatial variables on species richness of lacustrine fishes and to test their effect on species’ size distributions. We assembled datasets of species richness and body size and environmental (predictor factors for 13 Greek lakes. Model selection procedures revealed that fish species richness increased with ecosystem area and decreased with altitude. In addition, our results showed that latitude per se is a good predictor of body size. Indeed, the mean size of lacustrine communities in the northern and southern lake ecosystems differed significantly. These patterns reflect the biogeographical history of these areas and highlight the crucial role connectivity plays in communities’ species composition.

  8. Arsenic speciation in moso bamboo shoot - A terrestrial plant that contains organoarsenic species

    Energy Technology Data Exchange (ETDEWEB)

    Zhao Rui [Department of Chemistry, Key laboratory for Atomic and Molecular Nanosciences of Education Ministry, Tsinghua University, Beijing 100084, P.R. China (China); Zhao Mengxia [Department of Chemistry, Key laboratory for Atomic and Molecular Nanosciences of Education Ministry, Tsinghua University, Beijing 100084 (China); Wang Hui [Department of Chemistry, Key laboratory for Atomic and Molecular Nanosciences of Education Ministry, Tsinghua University, Beijing 100084 (China); Taneike, Yasuhito [Shimadzu Co Ltd, Spectroscopy Business Unit Analytical Instruments Div, Nakagyo Ku, Kyoto, 6048511 (Japan); Zhang Xinrong [Department of Chemistry, Key laboratory for Atomic and Molecular Nanosciences of Education Ministry, Tsinghua University, Beijing 100084 (China)]. E-mail: xrzhang@chem.tsinghua.edu.cn

    2006-12-01

    Arsenic is predominantly found as an inorganic species in most terrestrial plants. However, we found that a significant proportion of organic arsenic was present in moso bamboo (Phyllostachys pubescens Mazel) shoot in a market survey of arsenic species in edible terrestrial plants. Moso bamboo shoots from different producing areas in China were collected for analysis to confirm the ubiquity of methylated arsenic species. The total arsenic concentrations of bamboo shoots were determined by hydride generation coupled atomic fluorescence spectrometry (HG-AFS), ranging from 27.7 to 94.0 {mu}g/kg. Information about arsenic species was acquired from cold trap-hydride generation-atomic absorption spectrometry (CT-HG-AAS). Dimethylarsinic acid (DMA) was present in the amount of 13.9% to 44.9% of sum of the arsenic species in all these samples. Monomethylarsonic acid (MMA) and trimethylarsine oxide (TMAO) were also detected in certain samples in the range of 4.2-16.5% and 11.8-18.4%, respectively. In addition, bamboo shoots collected in winter were found to have more total arsenic and organic arsenic than those collected in spring. To investigate the source of the organic arsenic in moso bamboo shoots, arsenic species in the rhizosphere soils of the plants were examined. The absence of organic arsenic in soils would suggest the possibility of formation of methylated arsenic in the plants. In addition, studies of arsenic speciation in the peel and core of winter bamboo shoots showed that all the cores contained organic arsenic while no organic arsenic was detected in the peels. The study provides useful information for better understanding of the distribution of arsenic species in terrestrial plants.

  9. Interactions between terrestrial mammals and the fruits of two neotropical rainforest tree species

    Science.gov (United States)

    Camargo-Sanabria, Angela A.; Mendoza, Eduardo

    2016-05-01

    Mammalian frugivory is a distinctive biotic interaction of tropical forests; however, most efforts in the Neotropics have focused on cases of animals foraging in the forest canopy, in particular primates and bats. In contrast much less is known about this interaction when it involves fruits deposited on the forest floor and terrestrial mammals. We conducted a camera-trapping survey to analyze the characteristics of the mammalian ensembles visiting fruits of Licania platypus and Pouteria sapota deposited on the forest floor in a well preserved tropical rainforest of Mexico. Both tree species produce large fruits but contrast in their population densities and fruit chemical composition. In particular, we expected that more species of terrestrial mammals would consume P. sapota fruits due to its higher pulp:seed ratio, lower availability and greater carbohydrate content. We monitored fruits at the base of 13 trees (P. sapota, n = 4 and L. platypus, n = 9) using camera-traps. We recorded 13 mammal species from which we had evidence of 8 consuming or removing fruits. These eight species accounted for 70% of the species of mammalian frugivores active in the forest floor of our study area. The ensemble of frugivores associated with L. platypus (6 spp.) was a subset of that associated with P. sapota (8 spp). Large body-sized species such as Tapirus bairdii, Pecari tajacu and Cuniculus paca were the mammals more frequently interacting with fruits of the focal species. Our results further our understanding of the characteristics of the interaction between terrestrial mammalian frugivores and large-sized fruits, helping to gain a more balanced view of its importance across different tropical forests and providing a baseline to compare against defaunated forests.

  10. Estimating the spatial and temporal distribution of species richness within Sequoia and Kings Canyon National Parks.

    Directory of Open Access Journals (Sweden)

    Steve Wathen

    Full Text Available Evidence for significant losses of species richness or biodiversity, even within protected natural areas, is mounting. Managers are increasingly being asked to monitor biodiversity, yet estimating biodiversity is often prohibitively expensive. As a cost-effective option, we estimated the spatial and temporal distribution of species richness for four taxonomic groups (birds, mammals, herpetofauna (reptiles and amphibians, and plants within Sequoia and Kings Canyon National Parks using only existing biological studies undertaken within the Parks and the Parks' long-term wildlife observation database. We used a rarefaction approach to model species richness for the four taxonomic groups and analyzed those groups by habitat type, elevation zone, and time period. We then mapped the spatial distributions of species richness values for the four taxonomic groups, as well as total species richness, for the Parks. We also estimated changes in species richness for birds, mammals, and herpetofauna since 1980. The modeled patterns of species richness either peaked at mid elevations (mammals, plants, and total species richness or declined consistently with increasing elevation (herpetofauna and birds. Plants reached maximum species richness values at much higher elevations than did vertebrate taxa, and non-flying mammals reached maximum species richness values at higher elevations than did birds. Alpine plant communities, including sagebrush, had higher species richness values than did subalpine plant communities located below them in elevation. These results are supported by other papers published in the scientific literature. Perhaps reflecting climate change: birds and herpetofauna displayed declines in species richness since 1980 at low and middle elevations and mammals displayed declines in species richness since 1980 at all elevations.

  11. Disentangling the Role of Climate, Topography and Vegetation in Species Richness Gradients.

    Directory of Open Access Journals (Sweden)

    Mario R Moura

    Full Text Available Environmental gradients (EG related to climate, topography and vegetation are among the most important drivers of broad scale patterns of species richness. However, these different EG do not necessarily drive species richness in similar ways, potentially presenting synergistic associations when driving species richness. Understanding the synergism among EG allows us to address key questions arising from the effects of global climate and land use changes on biodiversity. Herein, we use variation partitioning (also know as commonality analysis to disentangle unique and shared contributions of different EG in explaining species richness of Neotropical vertebrates. We use three broad sets of predictors to represent the environmental variability in (i climate (annual mean temperature, temperature annual range, annual precipitation and precipitation range, (ii topography (mean elevation, range and coefficient of variation of elevation, and (iii vegetation (land cover diversity, standard deviation and range of forest canopy height. The shared contribution between two types of EG is used to quantify synergistic processes operating among EG, offering new perspectives on the causal relationships driving species richness. To account for spatially structured processes, we use Spatial EigenVector Mapping models. We perform analyses across groups with distinct dispersal abilities (amphibians, non-volant mammals, bats and birds and discuss the influence of vagility on the partitioning results. Our findings indicate that broad scale patterns of vertebrate richness are mainly affected by the synergism between climate and vegetation, followed by the unique contribution of climate. Climatic factors were relatively more important in explaining species richness of good dispersers. Most of the variation in vegetation that explains vertebrate richness is climatically structured, supporting the productivity hypothesis. Further, the weak synergism between topography and

  12. Butterfly species richness and diversity in the Trishna Wildlife Sanctuary in South Asia.

    Science.gov (United States)

    Majumder, Joydeb; Lodh, Rahul; Agarwala, B K

    2013-01-01

    Several wildlife sanctuaries in the world are home to the surviving populations of many endemic species. Trishna wildlife sanctuary in northeast India is protected by law, and is home to the last surviving populations of Asian bison (Bos gorus Smith), spectacle monkey (Trachypithecus phayrie Blyth), capped langur (Trachypithecus pileatus Blyth), slow loris (Nycticebus coucang Boddaert), wild cat (Felis chaus Schreber), and wild boars (Sus scrofa L.), among many other animals and plants. The sanctuary was explored for species richness and diversity of butterflies. A six-month-long study revealed the occurrence of 59 butterfly species that included 21 unique species and 9 species listed in the threatened category. The mixed moist deciduous mature forest of the sanctuary harbored greater species richness and species diversity (39 species under 31 genera) than other parts of the sanctuary, which is comprised of regenerated secondary mixed deciduous forest (37 species under 32 genera), degraded forests (32 species under 28 genera), and open grassland with patches of plantations and artificial lakes (24 species under 17 genera). The majority of these species showed a distribution range throughout the Indo-Malayan region and Australasia tropics, and eight species were distributed in the eastern parts of South Asia, including one species, Labadea martha (F.), which is distributed in the eastern Himalayas alone. Estimator Chao 2 provided the best-predicted value of species richness. The steep slope of the species accumulation curve suggested the occurrence of a large number of rare species, and a prolonged gentle slope suggested a higher species richness at a higher sample abundance. The species composition of vegetation-rich habitats showed high similarity in comparison to vegetation-poor habitats.

  13. Productivity is a poor predictor of plant species richness

    Science.gov (United States)

    P.B. Adler; E.T. Borer; H. Hillebrand; Y. Hautier; A. Hector; S. Harpole; L.R. O’Halloran; J.B. Grace; M. Anderson; J.D. Bakker; L.A. Biederman; C.S. Brown; Y.M. Buckley; L.B. Calabrese; C.-J. Chu; E.E. Cleland; S.L. Collins; K.L. Cottingham; M.J. Crawley; E.I. Damschen; K.W. Davies; N.M. DeCrappeo; P.A. Fay; J. Firn; P. Frater; E.I. Gasarch; D.S. Gruner; N. Hagenah; J. Hille. Ris Lambers

    2011-01-01

    For more than 30 years, the relationship between net primary productivity and species richness has generated intense debate in ecology about the processes regulating local diversity. The original view, which is still widely accepted, holds that the relationship is hump-shaped, with richness first rising and then declining with increasing productivity. Although recent...

  14. Beneath the veil: Plant growth form influences the strength of species richness-productivity relationships in forests

    Science.gov (United States)

    Oberle, B.; Grace, J.B.; Chase, J.M.

    2009-01-01

    Aim: Species richness has been observed to increase with productivity at large spatial scales, though the strength of this relationship varies among functional groups. In forests, canopy trees shade understorey plants, and for this reason we hypothesize that species richness of canopy trees will depend on macroclimate, while species richness of shorter growth forms will additionally be affected by shading from the canopy. In this study we test for differences in species richness-productivity relationships (SRPRs) among growth forms (canopy trees, shrubs, herbaceous species) in small forest plots. Location: We analysed 231 plots ranging from 34.0?? to 48.3?? N latitude and from 75.0?? to 124.2?? W longitude in the United States. Methods: We analysed data collected by the USDA Forest Inventory and Analysis program for plant species richness partitioned into different growth forms, in small plots. We used actual evapotranspiration as a macroclimatic estimate of regional productivity and calculated the area of light-blocking tissue in the immediate area surrounding plots for an estimate of the intensity of local shading. We estimated and compared SRPRs for different partitions of the species richness dataset using generalized linear models and we incorporated the possible indirect effects of shading using a structural equation model. Results: Canopy tree species richness increased strongly with regional productivity, while local shading primarily explained the variation in herbaceous plant richness. Shrub species richness was related to both regional productivity and local shading. Main conclusions: The relationship between total forest plant species richness and productivity at large scales belies strong effects of local interactions. Counter to the pattern for overall richness, we found that understorey herbaceous plant species richness does not respond to regional productivity gradients, and instead is strongly influenced by canopy density, while shrub species

  15. Helminth species richness of introduced and native grey mullets (Teleostei: Mugilidae).

    Science.gov (United States)

    Sarabeev, Volodimir

    2015-08-01

    Quantitative complex analyses of parasite communities of invaders across different native and introduced populations are largely lacking. The present study provides a comparative analysis of species richness of helminth parasites in native and invasive populations of grey mullets. The local species richness differed between regions and host species, but did not differ when compared with invasive and native hosts. The size of parasite assemblages of endohelminths was higher in the Mediterranean and Azov-Black Seas, while monogeneans were the most diverse in the Sea of Japan. The helminth diversity was apparently higher in the introduced population of Liza haematocheilus than that in their native habitat, but this trend could not be confirmed when the size of geographic range and sampling efforts were controlled for. The parasite species richness at the infracommunity level of the invasive host population is significantly lower compared with that of the native host populations that lends support to the enemy release hypothesis. A distribution pattern of the infracommunity richness of acquired parasites by the invasive host can be characterized as aggregated and it is random in native host populations. Heterogeneity in the host susceptibility and vulnerability to acquired helminth species was assumed to be a reason of the aggregation of species numbers in the population of the invasive host. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  16. Species richness in natural and disturbed habitats: Asteraceae and Flower-head insects (Tephritidae: Diptera).

    Science.gov (United States)

    Diniz, Soraia; Prado, Paulo I; Lewinsohn, Thomas M

    2010-01-01

    Anthropogenic changes in the landscape result in an environmental mosaic with serious consequences for biodiversity. The aim of the present study was to assess the effects of the anthropogenic changes on Asteraceae richness and abundance, and to evaluate the consequences for the richness of Tephritidae assemblages in five sampling sites, with three sampled habitats in each: cerrado (Brazilian savanna), eucalyptus stands and pasture. Sampling was carried out in 15 random transects (cerrados and one pasture) and in 30 transects (eucalyptus stands and the remaining pastures). Composition, species richness and insect abundance in each habitat type was estimated by sampling the flower heads for each species of host plant, collected by four people for 1h. Differences in mean abundance of plant population between habitats and sites were tested by two-way ANOVA. Differences in plant species richness between habitats and sites and effects of habitat, site and host plant richness on insect richness were tested using a generalized linear model with Poisson errors. Within each sampling site, cerrados showed higher species richness of Asteraceae than pastures and eucalyptus stands. There were also significant differences in plant richness among sites. Mean population abundance values were significantly different among habitats, but not among sites. Increased host plant richness led to significant insect species richness. There were no additional significant effects of habitat on insect richness. Therefore, anthropogenic alterations in landscape determined the impoverishment of plant assemblages and therefore of insect assemblages, because of the positive relationship between host plant richness and insect richness.

  17. Effects of spatial heterogeneity on butterfly species richness in Rocky Mountain National Park, CO, USA

    Science.gov (United States)

    Kumar, S.; Simonson, S.E.; Stohlgren, T.J.

    2009-01-01

    We investigated butterfly responses to plot-level characteristics (plant species richness, vegetation height, and range in NDVI [normalized difference vegetation index]) and spatial heterogeneity in topography and landscape patterns (composition and configuration) at multiple spatial scales. Stratified random sampling was used to collect data on butterfly species richness from seventy-six 20 ?? 50 m plots. The plant species richness and average vegetation height data were collected from 76 modified-Whittaker plots overlaid on 76 butterfly plots. Spatial heterogeneity around sample plots was quantified by measuring topographic variables and landscape metrics at eight spatial extents (radii of 300, 600 to 2,400 m). The number of butterfly species recorded was strongly positively correlated with plant species richness, proportion of shrubland and mean patch size of shrubland. Patterns in butterfly species richness were negatively correlated with other variables including mean patch size, average vegetation height, elevation, and range in NDVI. The best predictive model selected using Akaike's Information Criterion corrected for small sample size (AICc), explained 62% of the variation in butterfly species richness at the 2,100 m spatial extent. Average vegetation height and mean patch size were among the best predictors of butterfly species richness. The models that included plot-level information and topographic variables explained relatively less variation in butterfly species richness, and were improved significantly after including landscape metrics. Our results suggest that spatial heterogeneity greatly influences patterns in butterfly species richness, and that it should be explicitly considered in conservation and management actions. ?? 2008 Springer Science+Business Media B.V.

  18. Habitat availability does not explain the species richness patterns of European lentic and lotic freshwater animals

    DEFF Research Database (Denmark)

    Dehling, D.M.; Hof, C.; Brandle, M.

    2010-01-01

    Aim In Europe, the relationships between species richness and latitude differ for lentic (standing water) and lotic (running water) species. Freshwater animals are highly dependent on suitable habitat, and thus the distribution of available habitat should strongly influence large-scale patterns...... of species richness. We tested whether habitat availability can account for the differences in species richness patterns between European lentic and lotic freshwater animals. Location Europe. Methods We compiled occurrence data of 1959 lentic and 2445 lotic species as well as data on the amount of lentic...... for previously reported latitudinal patterns in species richness. For lotic species, richness declined with latitude, whereas there was no relationship between habitat availability and latitude. For lentic species, richness showed a hump-shaped relationship with latitude, whereas available habitat increased...

  19. Cross-scale modelling of alien and native vascular plant species richness in Great Britain: where is geodiversity information most relevant?

    Science.gov (United States)

    Bailey, Joseph; Field, Richard; Boyd, Doreen

    2016-04-01

    We assess the scale-dependency of the relationship between biodiversity and novel geodiversity information by studying spatial patterns of native and alien (archaeophytes and neophytes) vascular plant species richness at varying spatial scales across Great Britain. Instead of using a compound geodiversity metric, we study individual geodiversity components (GDCs) to advance our understanding of which aspects of 'geodiversity' are most important and at what scale. Terrestrial native (n = 1,490) and alien (n = 1,331) vascular plant species richness was modelled across the island of Great Britain at two grain sizes and several extent radii. Various GDCs (landforms, hydrology, geology) were compiled from existing national datasets and automatically extracted landform coverage information (e.g. hollows, valleys, peaks), the latter using a digital elevation model (DEM) and geomorphometric techniques. More traditional predictors of species richness (climate, widely-used topography metrics, land cover diversity, and human population) were also incorporated. Boosted Regression Tree (BRT) models were produced at all grain sizes and extents for each species group and the dominant predictors were assessed. Models with and without geodiversity data were compared. Overarching patterns indicated a clear dominance of geodiversity information at the smallest study extent (12.5km radius) and finest grain size (1x1km), which substantially decreased for each increase in extent as the contribution of climatic variables increased. The contribution of GDCs to biodiversity models was chiefly driven by landform information from geomorphometry, but hydrology (rivers and lakes), and to a lesser extent materials (soil, superficial deposits, and geology), were important, also. GDCs added significantly to vascular plant biodiversity models in Great Britain, independently of widely-used topographic metrics, particularly for native species. The wider consideration of geodiversity alongside

  20. Patterns of reptile and amphibian species richness along elevational gradients in Mt. Kenya

    Science.gov (United States)

    MALONZA, Patrick Kinyatta

    2015-01-01

    Faunal species richness is traditionally assumed to decrease with increasing elevation and decreasing primary productivity. Species richness is reported to peak at mid-elevation. This survey examines the herpetofaunal diversity and distribution in Mt. Kenya (central Kenya) by testing the hypothesis that changes in species richness with elevation relate to elevation-dependent changes in climate. Sampling along transects from an elevation of approximately 1 700 m in Chogoria forest block (wind-ward side) and approximately 2 600 m in Sirimon block (rain shadow zone) upwards in March 2009. This starts from the forest to montane alpine zones. Sampling of reptiles and amphibians uses pitfall traps associated with drift fences, time-limited searches and visual encounter surveys. The results show that herpetofaunal richness differs among three vegetation zones along the elevation gradient. Chogoria has higher biodiversity than Sirimon. More species occur at low and middle elevations and few exist at high elevations. The trends are consistent with expected optimum water and energy variables. The lower alpine montane zone has high species richness but low diversity due to dominance of some high elevations species. Unambiguous data do not support a mid-domain effect (mid-elevation peak) because the observed trend better fits a model in which climatic variables (rainfall and temperature) control species richness, which indirectly measures productivity. It is important to continue protection of all indigenous forests, especially at low to mid elevations. These areas are vulnerable to human destruction yet are home to some endemic species. Firebreaks can limit the spread of the perennial wildfires, especially on the moorlands. PMID:26646571

  1. Short-chain chlorinated paraffins in terrestrial bird species inhabiting an e-waste recycling site in South China

    International Nuclear Information System (INIS)

    Luo, Xiao-Jun; Sun, Yu-Xin; Wu, Jiang-Ping; Chen, She-Jun; Mai, Bi-Xian

    2015-01-01

    Short-chain chlorinated paraffins (SCCPs) are under review by the Stockholm Convention on Persistent Organic Pollutants. Currently, limited data are available about SCCPs in terrestrial organisms. In the present study, SCCP concentration in the muscles of seven terrestrial bird species (n = 38) inhabiting an e-waste recycling area in South China was determined. This concentration varied from 620 to 17,000 ng/g lipid. Resident birds accumulated significantly higher SCCP concentrations than migratory birds (p < 0.01). Trophic magnification was observed for migratory bird species but not for resident, which was attributed to high heterogeneity of SCCP in e-waste area. Two different homologue group patterns were observed in avian samples. The first pattern was found in five bird species dominated by C 10 and C 11 congeners, while the second was found in the remains, which show rather equal abundance of homologue groups. This may be caused by two sources of SCCPs (local and e-waste) in the study area. - Highlights: • SCCPs in terrestrial bird species from an e-waste area are first reported. • Elevated SCCP level was found as compared with other regions. • Resident birds accumulated significantly higher SCCP levels than migratory birds. • Trophic magnification was observed for migratory but not for resident bird species. • Two homologue patterns were found among seven bird species. - SCCP concentration in terrestrial bird species inhabiting an e-waste site was first reported in this study

  2. Introduced Terrestrial Species Richness (Future)

    Data.gov (United States)

    U.S. Environmental Protection Agency — These data represent predicted current distributions of all introduced fish in the Middle-Atlantic region. These data are available for both 8-digit HUCs and EMAP...

  3. Native Terrestrial Animal Species Richness

    Data.gov (United States)

    U.S. Environmental Protection Agency — These data represent predicted current distributions of all native mammals, birds, reptiles, amphibians and butterflies in the Middle-Atlantic region. The data are...

  4. Islands in a Sea of Mud: Insights From Terrestrial Island Theory for Community Assembly on Insular Marine Substrata.

    Science.gov (United States)

    Meyer, K S

    Most marine hard-bottom habitats are isolated, separated from other similar habitats by sand or mud flats, and can be considered analogous to terrestrial islands. The extensive scientific literature on terrestrial islands provides a theoretical framework for the analysis of isolated marine habitats. More individuals and higher species richness occur on larger marine substrata, a pattern that resembles terrestrial islands. However, while larger terrestrial islands have greater habitat diversity and productivity, the higher species richness on larger marine hard substrata can be explained by simple surface area and hydrodynamic phenomena: larger substrata extend further into the benthic boundary, exposing fauna to faster current and higher food supply. Marine island-like communities are also influenced by their distance to similar habitats, but investigations into the reproductive biology and dispersal ability of individual species are required for a more complete understanding of population connectivity. On terrestrial islands, nonrandom co-occurrence patterns have been attributed to interspecific competition, but while nonrandom co-occurrence patterns have been found for marine fauna, different mechanisms are responsible, including epibiontism. Major knowledge gaps for community assembly in isolated marine habitats include the degree of connectivity between isolated habitats, mechanisms of succession, and the extent of competition on hard substrata, particularly in the deep sea. Anthropogenic hard substrata of known age can be used opportunistically as "natural" laboratories to begin answering these questions. © 2017 Elsevier Ltd. All rights reserved.

  5. Global and Regional Patterns in Riverine Fish Species Richness: A Review

    Directory of Open Access Journals (Sweden)

    Thierry Oberdorff

    2011-01-01

    Full Text Available We integrate the respective role of global and regional factors driving riverine fish species richness patterns, to develop a synthetic model of potential mechanisms and processes generating these patterns. This framework allows species richness to be broken down into different components specific to each spatial extent and to establish links between these components and the processes involved. This framework should help to answer the questions that are currently being asked by society, including the effects of species invasions, habitat loss, or fragmentation and climate change on freshwater biodiversity.

  6. Geography, topography, and history affect realized-to-potential tree species richness patterns in Europe

    Science.gov (United States)

    Jens-Christian Svenning; Matthew C. Fitzpatrick; Signe Normand; Catherine H. Graham; Peter B. Pearman; Louis R. Iverson; Flemming. Skov

    2010-01-01

    Environmental conditions and biotic interactions are generally thought to influence local species richness. However, immigration and the evolutionary and historical factors that shape regional species pools should also contribute to determining local species richness because local communities arise by assembly from regional species pools. Using the European tree flora...

  7. Evolution of Epiphytism and Fruit Traits Act Unevenly on the Diversification of the Species-Rich Genus Peperomia (Piperaceae).

    Science.gov (United States)

    Frenzke, Lena; Goetghebeur, Paul; Neinhuis, Christoph; Samain, Marie-Stéphanie; Wanke, Stefan

    2016-01-01

    The species-rich genus Peperomia (Black Pepper relatives) is the only genus among early diverging angiosperms where epiphytism evolved. The majority of fruits of Peperomia release sticky secretions or exhibit hook-shaped appendages indicative of epizoochorous dispersal, which is in contrast to other flowering plants, where epiphytes are generally characterized by fruit morphological adaptations for anemochory or endozoochory. We investigate fruit characters using Cryo-SEM. Comparative phylogenetic analyses are applied for the first time to include life form and fruit character information to study diversification in Peperomia. Likelihood ratio tests uncover correlated character evolution. We demonstrate that diversification within Peperomia is not homogenous across its phylogeny, and that net diversification rates increase by twofold within the most species-rich subgenus. In contrast to former land plant studies that provide general evidence for increased diversification in epiphytic lineages, we demonstrate that the evolution of epiphytism within Peperomia predates the diversification shift. An epiphytic-dependent diversification is only observed for the background phylogeny. An elevated frequency of life form transitions between epiphytes and terrestrials and thus evolutionary flexibility of life forms is uncovered to coincide with the diversification shift. The evolution of fruits showing dispersal related structures is key to diversification in the foreground region of the phylogeny and postdates the evolution of epiphytism. We conclude that the success of Peperomia, measured in species numbers, is likely the result of enhanced vertical and horizontal dispersal ability and life form flexibility but not the evolution of epiphytism itself.

  8. Reversal in the relationship between species richness and turnover in a phytoplankton community.

    Science.gov (United States)

    Matthews, Blake; Pomati, Francesco

    2012-11-01

    Negative relationships between species richness and the rate of compositional turnover are common, suggesting that diverse communities have greater stability than depauperate ones; however, the mechanistic basis for this pattern is still widely debated. Species richness and turnover can covary either because they are mechanistically linked or because they share common environmental drivers. Few empirical studies have combined long-term changes in community composition with multiple drivers of environmental change, and so little is known about how the underlying mechanisms of species coexistence interact with changes in the mean and variability of environmental conditions. Here, we use a 33 year long time series (1976-2008) of phytoplankton community composition from Lake Zurich, to examine how environmental variation influences the relationship between richness and annual turnover. We find that the relationship between richness and annual turnover reverses midway through the time series (1992-1993), leading to a hump-shaped relationship between species richness and annual turnover. Using structural equation modeling we show that annual turnover and diversity are independently associated with different drivers of environmental change. Furthermore, we find that the observed annual sequences of community assembly give rise to rates of species accumulation that are more heterogeneous through time than expected by chance, likely owing to a high proportion of species showing significant autocorrelation and to strong positive covariation in the occurrences of species.

  9. Predicting spatial variations of tree species richness in tropical forests from high-resolution remote sensing.

    Science.gov (United States)

    Fricker, Geoffrey A; Wolf, Jeffrey A; Saatchi, Sassan S; Gillespie, Thomas W

    2015-10-01

    There is an increasing interest in identifying theories, empirical data sets, and remote-sensing metrics that can quantify tropical forest alpha diversity at a landscape scale. Quantifying patterns of tree species richness in the field is time consuming, especially in regions with over 100 tree species/ha. We examine species richness in a 50-ha plot in Barro Colorado Island in Panama and test if biophysical measurements of canopy reflectance from high-resolution satellite imagery and detailed vertical forest structure and topography from light detection and ranging (lidar) are associated with species richness across four tree size classes (>1, 1-10, >10, and >20 cm dbh) and three spatial scales (1, 0.25, and 0.04 ha). We use the 2010 tree inventory, including 204,757 individuals belonging to 301 species of freestanding woody plants or 166 ± 1.5 species/ha (mean ± SE), to compare with remote-sensing data. All remote-sensing metrics became less correlated with species richness as spatial resolution decreased from 1.0 ha to 0.04 ha and tree size increased from 1 cm to 20 cm dbh. When all stems with dbh > 1 cm in 1-ha plots were compared to remote-sensing metrics, standard deviation in canopy reflectance explained 13% of the variance in species richness. The standard deviations of canopy height and the topographic wetness index (TWI) derived from lidar were the best metrics to explain the spatial variance in species richness (15% and 24%, respectively). Using multiple regression models, we made predictions of species richness across Barro Colorado Island (BCI) at the 1-ha spatial scale for different tree size classes. We predicted variation in tree species richness among all plants (adjusted r² = 0.35) and trees with dbh > 10 cm (adjusted r² = 0.25). However, the best model results were for understory trees and shrubs (dbh 1-10 cm) (adjusted r² = 0.52) that comprise the majority of species richness in tropical forests. Our results indicate that high

  10. Combined use of leaf size and economics traits allows direct comparison of hydrophyte and terrestrial herbaceous adaptive strategies.

    Science.gov (United States)

    Pierce, Simon; Brusa, Guido; Sartori, Matteo; Cerabolini, Bruno E L

    2012-04-01

    Hydrophytes generally exhibit highly acquisitive leaf economics. However, a range of growth forms is evident, from small, free-floating and rapidly growing Lemniden to large, broad-leaved Nymphaeiden, denoting variability in adaptive strategies. Traits used to classify adaptive strategies in terrestrial species, such as canopy height, are not applicable to hydrophytes. We hypothesize that hydrophyte leaf size traits and economics exhibit sufficient overlap with terrestrial species to allow a common classification of plant functional types, sensu Grime's CSR theory. Leaf morpho-functional traits were measured for 61 species from 47 water bodies in lowland continental, sub-alpine and alpine bioclimatic zones in southern Europe and compared against the full leaf economics spectrum and leaf size range of terrestrial herbs, and between hydrophyte growth forms. Hydrophytes differed in the ranges and mean values of traits compared with herbs, but principal components analysis (PCA) demonstrated that both groups shared axes of trait variability: PCA1 encompassed size variation (area and mass), and PCA2 ranged from relatively dense, carbon-rich leaves to nitrogen-rich leaves of high specific leaf area (SLA). Most growth forms exhibited trait syndromes directly equivalent to herbs classified as R adapted, although Nymphaeiden ranged between C and SR adaptation. Our findings support the hypothesis that hydrophyte adaptive strategy variation reflects fundamental trade-offs in economics and size that govern all plants, and that hydrophyte adaptive strategies can be directly compared with terrestrial species by combining leaf economics and size traits.

  11. Climate patterns as predictors of amphibians species richness and indicators of potential stress

    Science.gov (United States)

    Battaglin, W.; Hay, L.; McCabe, G.; Nanjappa, P.; Gallant, Alisa L.

    2005-01-01

    Amphibians occupy a range of habitats throughout the world, but species richness is greatest in regions with moist, warm climates. We modeled the statistical relations of anuran and urodele species richness with mean annual climate for the conterminous United States, and compared the strength of these relations at national and regional levels. Model variables were calculated for county and subcounty mapping units, and included 40-year (1960-1999) annual mean and mean annual climate statistics, mapping unit average elevation, mapping unit land area, and estimates of anuran and urodele species richness. Climate data were derived from more than 7,500 first-order and cooperative meteorological stations and were interpolated to the mapping units using multiple linear regression models. Anuran and urodele species richness were calculated from the United States Geological Survey's Amphibian Research and Monitoring Initiative (ARMI) National Atlas for Amphibian Distributions. The national multivariate linear regression (MLR) model of anuran species richness had an adjusted coefficient of determination (R2) value of 0.64 and the national MLR model for urodele species richness had an R2 value of 0.45. Stratifying the United States by coarse-resolution ecological regions provided models for anUrans that ranged in R2 values from 0.15 to 0.78. Regional models for urodeles had R2 values. ranging from 0.27 to 0.74. In general, regional models for anurans were more strongly influenced by temperature variables, whereas precipitation variables had a larger influence on urodele models.

  12. Limited sampling hampers "big data" estimation of species richness in a tropical biodiversity hotspot.

    Science.gov (United States)

    Engemann, Kristine; Enquist, Brian J; Sandel, Brody; Boyle, Brad; Jørgensen, Peter M; Morueta-Holme, Naia; Peet, Robert K; Violle, Cyrille; Svenning, Jens-Christian

    2015-02-01

    Macro-scale species richness studies often use museum specimens as their main source of information. However, such datasets are often strongly biased due to variation in sampling effort in space and time. These biases may strongly affect diversity estimates and may, thereby, obstruct solid inference on the underlying diversity drivers, as well as mislead conservation prioritization. In recent years, this has resulted in an increased focus on developing methods to correct for sampling bias. In this study, we use sample-size-correcting methods to examine patterns of tropical plant diversity in Ecuador, one of the most species-rich and climatically heterogeneous biodiversity hotspots. Species richness estimates were calculated based on 205,735 georeferenced specimens of 15,788 species using the Margalef diversity index, the Chao estimator, the second-order Jackknife and Bootstrapping resampling methods, and Hill numbers and rarefaction. Species richness was heavily correlated with sampling effort, and only rarefaction was able to remove this effect, and we recommend this method for estimation of species richness with "big data" collections.

  13. Patterns and multi-scale drivers of phytoplankton species richness in temperate peri-urban lakes

    International Nuclear Information System (INIS)

    Catherine, Arnaud; Selma, Maloufi; Mouillot, David; Troussellier, Marc; Bernard, Cécile

    2016-01-01

    Local species richness (SR) is a key characteristic affecting ecosystem functioning. Yet, the mechanisms regulating phytoplankton diversity in freshwater ecosystems are not fully understood, especially in peri-urban environments where anthropogenic pressures strongly impact the quality of aquatic ecosystems. To address this issue, we sampled the phytoplankton communities of 50 lakes in the Paris area (France) characterized by a large gradient of physico-chemical and catchment-scale characteristics. We used large phytoplankton datasets to describe phytoplankton diversity patterns and applied a machine-learning algorithm to test the degree to which species richness patterns are potentially controlled by environmental factors. Selected environmental factors were studied at two scales: the lake-scale (e.g. nutrients concentrations, water temperature, lake depth) and the catchment-scale (e.g. catchment, landscape and climate variables). Then, we used a variance partitioning approach to evaluate the interaction between lake-scale and catchment-scale variables in explaining local species richness. Finally, we analysed the residuals of predictive models to identify potential vectors of improvement of phytoplankton species richness predictive models. Lake-scale and catchment-scale drivers provided similar predictive accuracy of local species richness (R"2 = 0.458 and 0.424, respectively). Both models suggested that seasonal temperature variations and nutrient supply strongly modulate local species richness. Integrating lake- and catchment-scale predictors in a single predictive model did not provide increased predictive accuracy; therefore suggesting that the catchment-scale model probably explains observed species richness variations through the impact of catchment-scale variables on in-lake water quality characteristics. Models based on catchment characteristics, which include simple and easy to obtain variables, provide a meaningful way of predicting phytoplankton

  14. Patterns and multi-scale drivers of phytoplankton species richness in temperate peri-urban lakes

    Energy Technology Data Exchange (ETDEWEB)

    Catherine, Arnaud, E-mail: arnocat@mnhn.fr [UMR7245 MCAM MNHN-CNRS, Muséum National d' Histoire Naturelle, CC 39, 12 rue Buffon, F-75231 Paris, Cedex 05 (France); Selma, Maloufi, E-mail: maloufi@mnhn.fr [UMR7245 MCAM MNHN-CNRS, Muséum National d' Histoire Naturelle, CC 39, 12 rue Buffon, F-75231 Paris, Cedex 05 (France); Mouillot, David, E-mail: david.mouillot@univ-montp2.fr [UMR 9190 MARBEC UM2-CNRS-IRD-UM1-IFREMER, CC 93, Place Eugène Bataillon, Université de Montpellier 2, F-34095 Montpellier (France); Troussellier, Marc, E-mail: troussel@univ-montp2.fr [UMR 9190 MARBEC UM2-CNRS-IRD-UM1-IFREMER, CC 93, Place Eugène Bataillon, Université de Montpellier 2, F-34095 Montpellier (France); Bernard, Cécile, E-mail: cbernard@mnhn.fr [UMR7245 MCAM MNHN-CNRS, Muséum National d' Histoire Naturelle, CC 39, 12 rue Buffon, F-75231 Paris, Cedex 05 (France)

    2016-07-15

    Local species richness (SR) is a key characteristic affecting ecosystem functioning. Yet, the mechanisms regulating phytoplankton diversity in freshwater ecosystems are not fully understood, especially in peri-urban environments where anthropogenic pressures strongly impact the quality of aquatic ecosystems. To address this issue, we sampled the phytoplankton communities of 50 lakes in the Paris area (France) characterized by a large gradient of physico-chemical and catchment-scale characteristics. We used large phytoplankton datasets to describe phytoplankton diversity patterns and applied a machine-learning algorithm to test the degree to which species richness patterns are potentially controlled by environmental factors. Selected environmental factors were studied at two scales: the lake-scale (e.g. nutrients concentrations, water temperature, lake depth) and the catchment-scale (e.g. catchment, landscape and climate variables). Then, we used a variance partitioning approach to evaluate the interaction between lake-scale and catchment-scale variables in explaining local species richness. Finally, we analysed the residuals of predictive models to identify potential vectors of improvement of phytoplankton species richness predictive models. Lake-scale and catchment-scale drivers provided similar predictive accuracy of local species richness (R{sup 2} = 0.458 and 0.424, respectively). Both models suggested that seasonal temperature variations and nutrient supply strongly modulate local species richness. Integrating lake- and catchment-scale predictors in a single predictive model did not provide increased predictive accuracy; therefore suggesting that the catchment-scale model probably explains observed species richness variations through the impact of catchment-scale variables on in-lake water quality characteristics. Models based on catchment characteristics, which include simple and easy to obtain variables, provide a meaningful way of predicting phytoplankton

  15. USING TAXONOMIC REVISION DATA TO ESTIMATE THE GLOBAL SPECIES RICHNESS AND CHARACTERISTICS OF UNDESCRIBED SPECIES OF DIVING BEETLES (COLEOPTERA: DYTISCIDAE

    Directory of Open Access Journals (Sweden)

    Viktor Nilsson-Örtman

    2010-06-01

    Full Text Available Many methods used for estimating species richness are either difficult to use on poorly known taxa or require input data that are laborious and expensive to collect. In this paper we apply a method which takes advantage of the carefully conducted tests of how the described diversity compares to real species richness that are inherent in taxonomic revisions. We analyze the quantitative outcome from such revisions with respect to body size, zoogeographical region and phylogenetic relationship. The best fitting model is used to predict the diversity of unrevised groups if these would have been subject to as rigorous species level hypothesis-testing as the revised groups. The sensitivity of the predictive model to single observations is estimated by bootstrapping over resampled subsets of the original data. The Dytiscidae is with its 4080 described species (end of May 2009 the most diverse group of aquatic beetles and have a world-wide distribution. Extensive taxonomic work has been carried out on the family but still the number of described species increases exponentially in most zoogeographical regions making many commonly used methods of estimation difficult to apply. We provide independent species richness estimates of subsamples for which species richness estimates can be reached through extrapolation and compare these to the species richness estimates obtained through the method using revision data. We estimate there to be 5405 species of dytiscids, a 1.32-fold increase over the present number of described species. The undescribed diversity is likely to be biased towards species with small body size from tropical regions outside of Africa.

  16. Livestock grazing has minimal effect on the species richness and ...

    African Journals Online (AJOL)

    The Succulent Karoo, one of two arid biodiversity hotspots in the world, is known for its high plant species richness, but little is known about the influence of topography and how it mediates the potentially deleterious effects of grazing. Changes in vegetation species composition, cover and species diversity were examined ...

  17. Morphological and molecular characterization and phylogenetic relationships of a new species of trypanosome in Tapirus terrestris (lowland tapir), Trypanosoma terrestris sp. nov., from Atlantic Rainforest of southeastern Brazi.

    Science.gov (United States)

    Acosta, Igor da Cunha Lima; da Costa, Andrea Pereira; Nunes, Pablo Henrique; Gondim, Maria Fernanda Naegeli; Gatti, Andressa; Rossi, João Luiz; Gennari, Solange Maria; Marcili, Arlei

    2013-12-11

    The Lowland tapir (Tapirus terrestris) is the largest Brazilian mammal and despite being distributed in various Brazilian biomes, it is seriously endangered in the Atlantic Rainforest. These hosts were never evaluated for the presence of Trypanosoma parasites. The Lowland tapirs were captured in the Brazilian southeastern Atlantic Rainforest, Espírito Santo state. Trypanosomes were isolated by hemoculture, and the molecular phylogeny based on small subunit rDNA (SSU rDNA) and glycosomal-3-phosphate dehydrogenase (gGAPDH) gene sequences and the ultrastructural features seen via light microscopy and scanning and transmission electron microscopy are described. Phylogenetic trees using combined SSU rDNA and gGAPDH data sets clustered the trypanosomes of Lowland tapirs, which were highly divergent from other trypanosome species. The phylogenetic position and morphological discontinuities, mainly in epimastigote culture forms, made it possible to classify the trypanosomes from Lowland tapirs as a separate species. The isolated trypanosomes from Tapirus terrestris are a new species, Trypanosoma terrestris sp. n., and were positioned in a new Trypanosoma clade, named T. terrestris clade.

  18. Grassland invader responses to realistic changes in native species richness.

    Science.gov (United States)

    Rinella, Matthew J; Pokorny, Monica L; Rekaya, Romdhane

    2007-09-01

    The importance of species richness for repelling exotic plant invasions varies from ecosystem to ecosystem. Thus, in order to prioritize conservation objectives, it is critical to identify those ecosystems where decreasing richness will most greatly magnify invasion risks. Our goal was to determine if invasion risks greatly increase in response to common reductions in grassland species richness. We imposed treatments that mimic management-induced reductions in grassland species richness (i.e., removal of shallow- and/or deep-rooted forbs and/or grasses and/or cryptogam layers). Then we introduced and monitored the performance of a notorious invasive species (i.e., Centaurea maculosa). We found that, on a per-gram-of-biomass basis, each resident plant group similarly suppressed invader growth. Hence, with respect to preventing C. maculosa invasions, maintaining overall productivity is probably more important than maintaining the productivity of particular plant groups or species. But at the sites we studied, all plant groups may be needed to maintain overall productivity because removing forbs decreased overall productivity in two of three years. Alternatively, removing forbs increased productivity in another year, and this led us to posit that removing forbs may inflate the temporal productivity variance as opposed to greatly affecting time-averaged productivity. In either case, overall productivity responses to single plant group removals were inconsistent and fairly modest, and only when all plant groups were removed did C. maculosa growth increase substantially over a no-removal treatment. As such, it seems that intense disturbances (e.g., prolonged drought, overgrazing) that deplete multiple plant groups may often be a prerequisite for C. maculosa invasion.

  19. Introduced Terrestrial Species (Future)

    Data.gov (United States)

    U.S. Environmental Protection Agency — These data represent predicted future potential distributions of terrestrial plants, animals, and pathogens non-native to the Middle-Atlantic region. These data are...

  20. Species richness and relative species abundance of Nymphalidae (Lepidoptera in three forests with different perturbations in the North-Central Caribbean of Costa Rica

    Directory of Open Access Journals (Sweden)

    Carolyn Stephen

    2014-09-01

    Full Text Available Measurements of species richness and species abundance can have important implications for regulations and conservation. This study investigated species richness and abundance of butterflies in the family Nymphalidae at undisturbed, and disturbed habitats in Tirimbina Biological Reserve and Nogal Private Reserve, Sarapiquí, Costa Rica. Traps baited with rotten banana were placed in the canopy and the understory of three habitats: within mature forest, at a river/forest border, and at a banana plantation/forest border. In total, 71 species and 487 individuals were caught and identified during May and June 2011 and May 2013. Species richness and species abundance were found to increase significantly at perturbed habitats (p<0.0001, p<0.0001, respectively. The edge effect, in which species richness and abundance increase due to greater complementary resources from different habitats, could be one possible explanation for increased species richness and abundance. Rev. Biol. Trop. 62 (3: 919-928. Epub 2014 September 01.

  1. Temperature-size responses match latitudinal-size clines in arthropods, revealing critical differences between aquatic and terrestrial species

    DEFF Research Database (Denmark)

    Horne, C.R.; Hirst, Andrew G.; Atkinson, D.

    2015-01-01

    of these gradients to date, and find that their direction and magnitude co-vary among 12 arthropod orders (r2 = 0.72). Body size in aquatic species generally reduces with both warming and decreasing latitude, whereas terrestrial species have much reduced and even opposite gradients. These patterns support...... the prediction that oxygen limitation is a major controlling factor in water, but not in air. Furthermore, voltinism explains much of the variation in T-S and L-S patterns in terrestrial but not aquatic species. While body size decreases with warming and with decreasing latitude in multivoltine terrestrial......Two major intraspecific patterns of adult size variation are plastic temperature-size (T-S) responses and latitude-size (L-S) clines. Yet, the degree to which these co-vary and share explanatory mechanisms has not been systematically evaluated. We present the largest quantitative comparison...

  2. Topographic heterogeneity and temperature amplitude explain species richness patterns of birds in the Qinghai-Tibetan Plateau.

    Science.gov (United States)

    Zhang, Chunlan; Quan, Qing; Wu, Yongjie; Chen, Youhua; He, Peng; Qu, Yanhua; Lei, Fumin

    2017-04-01

    Large-scale patterns of species richness have gained much attention in recent years; however, the factors that drive high species richness are still controversial in local regions, especially in highly diversified montane regions. The Qinghai-Tibetan Plateau (QTP) and the surrounding mountains are biodiversity hot spots due to a high number of endemic montane species. Here, we explored the factors underlying this high level of diversity by studying the relationship between species richness and environmental variables. The richness patterns of 758 resident bird species were summarized at the scale of 1°×1° grid cell at different taxonomic levels (order, family, genus, and species) and in different taxonomic groups (Passeriformes, Galliformes, Falconiformes, and Columbiformes). These richness patterns were subsequently analyzed against habitat heterogeneity (topographical heterogeneity and land cover), temperature amplitude (annual temperature, annual precipitation, precipitation seasonality, and temperature seasonality) and a vegetation index (net primary productivity). Our results showed that the highest richness was found in the southeastern part of the QTP, the eastern Himalayas. The lowest richness was observed in the central plateau of the QTP. Topographical heterogeneity and temperature amplitude are the primary factors that explain overall patterns of species richness in the QTP, although the specific effect of each environmental variable varies between the different taxonomic groups depending on their own evolutionary histories and ecological requirements. High species richness in the southeastern QTP is mostly due to highly diversified habitat types and temperature zones along elevation gradients, whereas the low species richness in the central plateau of the QTP may be due to environmental and energetic constraints, as the central plateau is harsh environment.

  3. Plant species richness regulates soil respiration through changes in productivity.

    Science.gov (United States)

    Dias, André Tavares Corrêa; van Ruijven, Jasper; Berendse, Frank

    2010-07-01

    Soil respiration is an important pathway of the C cycle. However, it is still poorly understood how changes in plant community diversity can affect this ecosystem process. Here we used a long-term experiment consisting of a gradient of grassland plant species richness to test for effects of diversity on soil respiration. We hypothesized that plant diversity could affect soil respiration in two ways. On the one hand, more diverse plant communities have been shown to promote plant productivity, which could increase soil respiration. On the other hand, the nutrient concentration in the biomass produced has been shown to decrease with diversity, which could counteract the production-induced increase in soil respiration. Our results clearly show that soil respiration increased with species richness. Detailed analysis revealed that this effect was not due to differences in species composition. In general, soil respiration in mixtures was higher than would be expected from the monocultures. Path analysis revealed that species richness predominantly regulates soil respiration through changes in productivity. No evidence supporting the hypothesized negative effect of lower N concentration on soil respiration was found. We conclude that shifts in productivity are the main mechanism by which changes in plant diversity may affect soil respiration.

  4. Deficit in community species richness as explained by area and isolation of sites

    DEFF Research Database (Denmark)

    Bruun, Hans Henrik

    2000-01-01

    The potential community species richness was predicted for 85 patches of seminatural grassland in an agricultural landscape in Denmark. The basis of the prediction was a very large dataset on the vegetation, soil pH and topography in Danish grasslands and related communities. Species were inserte......, community richness deficit, varied considerably among patches. Community richness deficit exhibited a negative relationship with patch area, and for small patches a positive relationship with patch isolation....

  5. Exotic and invasive terrestrial and freshwater animal species in the Dutch Caribbean

    NARCIS (Netherlands)

    Buurt, van G.; Debrot, A.O.

    2011-01-01

    An overview of 72 invasive animals of the terrestrial and freshwater environments of the Dutch Caribbean, eleven of which are no longer present. All invasive animals that are principally agricultural pests and or animal and plant diseases (46 species) are excluded as these are discussed separately

  6. Patterns of Freshwater Species Richness, Endemism, and Vulnerability in California.

    Directory of Open Access Journals (Sweden)

    Jeanette K Howard

    Full Text Available The ranges and abundances of species that depend on freshwater habitats are declining worldwide. Efforts to counteract those trends are often hampered by a lack of information about species distribution and conservation status and are often strongly biased toward a few well-studied groups. We identified the 3,906 vascular plants, macroinvertebrates, and vertebrates native to California, USA, that depend on fresh water for at least one stage of their life history. We evaluated the conservation status for these taxa using existing government and non-governmental organization assessments (e.g., endangered species act, NatureServe, created a spatial database of locality observations or distribution information from ~400 data sources, and mapped patterns of richness, endemism, and vulnerability. Although nearly half of all taxa with conservation status (n = 1,939 are vulnerable to extinction, only 114 (6% of those vulnerable taxa have a legal mandate for protection in the form of formal inclusion on a state or federal endangered species list. Endemic taxa are at greater risk than non-endemics, with 90% of the 927 endemic taxa vulnerable to extinction. Records with spatial data were available for a total of 2,276 species (61%. The patterns of species richness differ depending on the taxonomic group analyzed, but are similar across taxonomic level. No particular taxonomic group represents an umbrella for all species, but hotspots of high richness for listed species cover 40% of the hotspots for all other species and 58% of the hotspots for vulnerable freshwater species. By mapping freshwater species hotspots we show locations that represent the top priority for conservation action in the state. This study identifies opportunities to fill gaps in the evaluation of conservation status for freshwater taxa in California, to address the lack of occurrence information for nearly 40% of freshwater taxa and nearly 40% of watersheds in the state, and to

  7. Elevational pattern of bird species richness and its causes along a central Himalaya gradient, China.

    Science.gov (United States)

    Pan, Xinyuan; Ding, Zhifeng; Hu, Yiming; Liang, Jianchao; Wu, Yongjie; Si, Xingfeng; Guo, Mingfang; Hu, Huijian; Jin, Kun

    2016-01-01

    This study examines the relative importance of six variables: area, the mid-domain effect, temperature, precipitation, productivity, and habitat heterogeneity on elevational patterns of species richness for breeding birds along a central Himalaya gradient in the Gyirong Valley, the longest of five canyons in the Mount Qomolangma National Nature Reserve. We conducted field surveys in each of twelve elevational bands of 300 m between 1,800 and 5,400 m asl four times throughout the entire wet season. A total of 169 breeding bird species were recorded and most of the species (74%) were small-ranged. The species richness patterns of overall, large-ranged and small-ranged birds were all hump-shaped, but with peaks at different elevations. Large-ranged species and small-ranged species contributed equally to the overall richness pattern. Based on the bivariate and multiple regression analyses, area and precipitation were not crucial factors in determining the species richness along this gradient. The mid-domain effect played an important role in shaping the richness pattern of large-ranged species. Temperature was negatively correlated with overall and large-ranged species but positively correlated with small-ranged species. Productivity was a strong explanatory factor among all the bird groups, and habitat heterogeneity played an important role in shaping the elevational richness patterns of overall and small-ranged species. Our results highlight the need to conserve primary forest and intact habitat in this area. Furthermore, we need to increase conservation efforts in this montane biodiversity hotspot in light of increasing anthropogenic activities and land use pressure.

  8. Right place, wrong species: a 20-year review of rabies virus cross species transmission among terrestrial mammals in the United States.

    Directory of Open Access Journals (Sweden)

    Ryan M Wallace

    Full Text Available In the continental US, four terrestrial mammalian species are reservoirs for seven antigenic rabies virus variants. Cross species transmission (CST occurs when a rabies virus variant causes disease in non-reservoir species.This study analyzed national surveillance data for rabies in terrestrial mammals. The CST rate was defined as: number of rabid non-reservoir animals/number of rabid reservoir animals. CST rates were analyzed for trend. Clusters of high CST rate counties were evaluated using space-time scanning statistics.The number of counties reporting a raccoon variant CST rate >1.0 increased from 75 in 1992 to 187 in 2011; counties with skunk variant CST rates >1.0 remained unchanged during the same period. As of 2011, for every rabid raccoon reported within the raccoon variant region, there were 0.73 cases of this variant reported in non-reservoir animals. Skunks were the most common non-reservoir animal reported with the raccoon rabies variant. Domestic animals were the most common non-reservoir animal diagnosed with a skunk rabies virus variant (n = 1,601. Cross species transmission rates increased fastest among domestic animals.Cross species transmission of rabies virus variants into non-reservoir animals increases the risk of human exposures and threatens current advances toward rabies control. Cross species transmission in raccoon rabies enzootic regions increased dramatically during the study period. Pet owners should vaccinate their dogs and cats to ensure against CST, particularly in regions with active foci of rabies circulation. Clusters of high CST activity represent areas for further study to better understand interspecies disease transmission dynamics. Each CST event has the potential to result in a rabies virus adapted for sustained transmission in a new species; therefore further understanding of the dynamics of CST may help in early detection or prevention of the emergence of new terrestrial rabies virus variants.

  9. Primary controls on species richness in higher taxa.

    Science.gov (United States)

    Rabosky, Daniel L

    2010-12-01

    The disparity in species richness across the tree of life is one of the most striking and pervasive features of biological diversity. Some groups are exceptionally diverse, whereas many other groups are species poor. Differences in diversity among groups are frequently assumed to result from primary control by differential rates of net diversification. However, a major alternative explanation is that ecological and other factors exert primary control on clade diversity, such that apparent variation in net diversification rates is a secondary consequence of ecological limits on clade growth. Here, I consider a likelihood framework for distinguishing between these competing hypotheses. I incorporate hierarchical modeling to explicitly relax assumptions about the constancy of diversification rates across clades, and I propose several statistics for a posteriori evaluation of model adequacy. I apply the framework to a recent dated phylogeny of ants. My results reject the hypothesis that net diversification rates exert primary control on species richness in this group and demonstrate that clade diversity is better explained by total time-integrated speciation. These results further suggest that it may not possible to estimate meaningful speciation and extinction rates from higher-level phylogenies of extant taxa only.

  10. SPECIES RICHNESS AND UNIFORMITY CONTRIBUTIONS TO BIRD DIVERSITY IN SHADE COFFEE PLANTATIONS IN THE SOUTHEAST OF MEXICO

    Directory of Open Access Journals (Sweden)

    Marco Antonio Altamirano González Ortega

    2012-12-01

    Full Text Available This study examines the contribution of the richness and uniformity in the diversity of birds, and their relationship with covariates of vegetation in a coffee landscape in southern Mexico. Species richness and abundance was recorded in 2010 and 2011 in evergreen forests and three different types of coffee production systems. Changes in the values of species richness and uniformity were detected by a SHE analysis (S = species richness, H = diversity and E = evenness. True diversity (the actual number of species actually represent the diversity of species in the samples was also estimated. The tree cover, shrub cover and tree height were covariates of vegetation that explained the variation in species richness and abundance. SHE analysis indicated that cumulative values of bird diversity increased in all plots with species richness, while the values of uniformity of species decreased. This condition changed with management activities of coffee and / or the arrival of migratory birds. The true diversity, when all species had a weight proportional to its abundance (q = 1, was higher in all plots when they were given greater weight to the dominant species (q = 2. Management practices of tree cover and shrubs and bird migration could explain changes in species richness and uniformity during the agricultural cycle.

  11. Do non-native plant species affect the shape of productivity-diversity relationships?

    Science.gov (United States)

    Drake, J.M.; Cleland, E.E.; Horner-Devine, M. C.; Fleishman, E.; Bowles, C.; Smith, M.D.; Carney, K.; Emery, S.; Gramling, J.; Vandermast, D.B.; Grace, J.B.

    2008-01-01

    The relationship between ecosystem processes and species richness is an active area of research and speculation. Both theoretical and experimental studies have been conducted in numerous ecosystems. One finding of these studies is that the shape of the relationship between productivity and species richness varies considerably among ecosystems and at different spatial scales, though little is known about the relative importance of physical and biological mechanisms causing this variation. Moreover, despite widespread concern about changes in species' global distributions, it remains unclear if and how such large-scale changes may affect this relationship. We present a new conceptual model of how invasive species might modulate relationships between primary production and species richness. We tested this model using long-term data on relationships between aboveground net primary production and species richness in six North American terrestrial ecosystems. We show that primary production and abundance of non-native species are both significant predictors of species richness, though we fail to detect effects of invasion extent on the shapes of the relationship between species richness and primary production.

  12. Species richness and soil properties in Pinus ponderosa forests: A structural equation modeling analysis

    Science.gov (United States)

    Laughlin, D.C.; Abella, S.R.; Covington, W.W.; Grace, J.B.

    2007-01-01

    Question: How are the effects of mineral soil properties on understory plant species richness propagated through a network of processes involving the forest overstory, soil organic matter, soil nitrogen, and understory plant abundance? Location: North-central Arizona, USA. Methods: We sampled 75 0.05-ha plots across a broad soil gradient in a Pinus ponderosa (ponderosa pine) forest ecosystem. We evaluated multivariate models of plant species richness using structural equation modeling. Results: Richness was highest at intermediate levels of understory plant cover, suggesting that both colonization success and competitive exclusion can limit richness in this system. We did not detect a reciprocal positive effect of richness on plant cover. Richness was strongly related to soil nitrogen in the model, with evidence for both a direct negative effect and an indirect non-linear relationship mediated through understory plant cover. Soil organic matter appeared to have a positive influence on understory richness that was independent of soil nitrogen. Richness was lowest where the forest overstory was densest, which can be explained through indirect effects on soil organic matter, soil nitrogen and understory cover. Finally, model results suggest a variety of direct and indirect processes whereby mineral soil properties can influence richness. Conclusions: Understory plant species richness and plant cover in P. ponderosa forests appear to be significantly influenced by soil organic matter and nitrogen, which are, in turn, related to overstory density and composition and mineral soil properties. Thus, soil properties can impose direct and indirect constraints on local species diversity in ponderosa pine forests. ?? IAVS; Opulus Press.

  13. Species Richness and Diversity Reveal that Human-Modified ...

    African Journals Online (AJOL)

    Family diversity and richness showed no significant differences across the sites. The spider species consisted of primarily three functional groups: ground wanderers, web builders and plant wanderers, and showed no within-group differences in abundance between sites. Similarity index between the study sites revealed a ...

  14. Limited sampling hampers “big data” estimation of species richness in a tropical biodiversity hotspot

    DEFF Research Database (Denmark)

    Engemann, Kristine; Enquist, Brian J.; Sandel, Brody Steven

    2015-01-01

    in Ecuador, one of the most species-rich and climatically heterogeneous biodiversity hotspots. Species richness estimates were calculated based on 205,735 georeferenced specimens of 15,788 species using the Margalef diversity index, the Chao estimator, the second-order Jackknife and Bootstrapping resampling...

  15. Ant species richness of fynbos and forest ecosystems in the ...

    African Journals Online (AJOL)

    The ant fauna in fynbos and forest habitats in the southern Cape are compared. There is no significant difference in ant species richness between the two undisturbed habitat types, and the only two species common to both are Acantholepis capensis and Camponotus maculatus. The degree of Hakea sericea infestation in ...

  16. Vascular plant species richness along environmental gradients in a cool temperate to sub-alpine mountainous zone in central Japan.

    Science.gov (United States)

    Tsujino, Riyou; Yumoto, Takakazu

    2013-03-01

    In order to clarify how vegetation types change along the environmental gradients in a cool temperate to sub-alpine mountainous zone and the determinant factors that define plant species richness, we established 360 plots (each 4 × 10 m) within which the vegetation type, species richness, elevation, topographic position index (TPI), slope inclination, and ground light index (GLI) of the natural vegetation were surveyed. Mean elevation, TPI, slope inclination, and GLI differed across vegetation types. Tree species richness was negatively correlated with elevation, whereas fern and herb species richness were positively correlated. Tree species richness was greater in the upper slope area than the lower slope area, whereas fern and herb species richness were greater in the lower slope area. Ferns and trees species richness were smaller in the open canopy, whereas herb species richness was greater in the open canopy. Vegetation types were determined firstly by elevation and secondary by topographic configurations, such as topographic position, and slope inclination. Elevation and topography were the most important factors affecting plant richness, but the most influential variables differed among plant life-form groups. Moreover, the species richness responses to these environmental gradients greatly differed among ferns, herbs, and trees.

  17. Relationships between Plant Biomass and Species Richness under ...

    African Journals Online (AJOL)

    The study was conducted in a montane grassland of Kokosa District, West Arsi Zone of Oromia Region, southern Ethiopia. The objective of the study was to investigate the relationships between aboveground plant biomass and species richness in three farming systems and four grazing management systems. A total of 180 ...

  18. Temporal comparison and predictors of fish species abundance and richness on undisturbed coral reef patches

    Directory of Open Access Journals (Sweden)

    Elena L.E.S. Wagner

    2015-12-01

    Full Text Available Large disturbances can cause rapid degradation of coral reef communities, but what baseline changes in species assemblages occur on undisturbed reefs through time? We surveyed live coral cover, reef fish abundance and fish species richness in 1997 and again in 2007 on 47 fringing patch reefs of varying size and depth at Mersa Bareika, Ras Mohammed National Park, Egypt. No major human or natural disturbance event occurred between these two survey periods in this remote protected area. In the absence of large disturbances, we found that live coral cover, reef fish abundance and fish species richness did not differ in 1997 compared to 2007. Fish abundance and species richness on patches was largely related to the presence of shelters (caves and/or holes, live coral cover and patch size (volume. The presence of the ectoparasite-eating cleaner wrasse, Labroides dimidiatus, was also positively related to fish species richness. Our results underscore the importance of physical reef characteristics, such as patch size and shelter availability, in addition to biotic characteristics, such as live coral cover and cleaner wrasse abundance, in supporting reef fish species richness and abundance through time in a relatively undisturbed and understudied region.

  19. Three Nematode Species Recovered from Terrestrial Snakes in Republic of Korea.

    Science.gov (United States)

    Choe, Seongjun; Lim, Junsik; Kim, Hyun; Kim, Youngjun; Kim, Heejong; Lee, Dongmin; Park, Hansol; Jeon, Hyeong-Kyu; Eom, Keeseon S

    2016-04-01

    The majority of parasitological studies of terrestrial snakes in Korea have focused on zoonotic parasites. However, in the present study, we describe 3 unrecorded nematode species recovered from 5 species of snakes (n=6) in Korea. The examined snakes, all confiscated from illegal hunters, were donated by the Chungnam Wild Animal Rescue Center and Korean Broadcasting System in July 2014 and February 2015. Light and scanning electron microscopies on the shapes of spicules that are either bent or straight (kalicephalids) and the presence of the intestinal cecum (ophidascarids) figured out 3 nematodes; Kalicephalus brachycephalus Maplestone, 1931, Kalicephalus sinensis Hsü, 1934, and Ophidascaris excavata Hsü and Hoeppli, 1934. These 3 species of nematode faunas are recorded for the first time in Korea.

  20. V. Terrestrial vertebrates

    Science.gov (United States)

    Dean Pearson; Deborah Finch

    2011-01-01

    Within the Interior West, terrestrial vertebrates do not represent a large number of invasive species relative to invasive weeds, aquatic vertebrates, and invertebrates. However, several invasive terrestrial vertebrate species do cause substantial economic and ecological damage in the U.S. and in this region (Pimental 2000, 2007; Bergman and others 2002; Finch and...

  1. What Explains Patterns of Diversification and Richness among Animal Phyla?

    Science.gov (United States)

    Jezkova, Tereza; Wiens, John J

    2017-03-01

    Animal phyla vary dramatically in species richness (from one species to >1.2 million), but the causes of this variation remain largely unknown. Animals have also evolved striking variation in morphology and ecology, including sessile marine taxa lacking heads, eyes, limbs, and complex organs (e.g., sponges), parasitic worms (e.g., nematodes, platyhelminths), and taxa with eyes, skeletons, limbs, and complex organs that dominate terrestrial ecosystems (arthropods, chordates). Relating this remarkable variation in traits to the diversification and richness of animal phyla is a fundamental yet unresolved problem in biology. Here, we test the impacts of 18 traits (including morphology, ecology, reproduction, and development) on diversification and richness of extant animal phyla. Using phylogenetic multiple regression, the best-fitting model includes five traits that explain ∼74% of the variation in diversification rates (dioecy, parasitism, eyes/photoreceptors, a skeleton, nonmarine habitat). However, a model including just three (skeleton, parasitism, habitat) explains nearly as much variation (∼67%). Diversification rates then largely explain richness patterns. Our results also identify many striking traits that have surprisingly little impact on diversification (e.g., head, limbs, and complex circulatory and digestive systems). Overall, our results reveal the key factors that shape large-scale patterns of diversification and richness across >80% of all extant, described species.

  2. Urbanization level and woodland size are major drivers of woodpecker species richness and abundance.

    Directory of Open Access Journals (Sweden)

    Lukasz Myczko

    Full Text Available Urbanization is a process globally responsible for loss of biodiversity and for biological homogenization. Urbanization may have a direct negative impact on species behaviour and indirect effects on species populations through alterations of their habitats, for example patch size and habitat quality. Woodpeckers are species potentially susceptible to urbanization. These birds are mostly forest specialists and the development of urban areas in former forests may be an important factor influencing their richness and abundance, but documented examples are rare. In this study we investigated how woodpeckers responded to changes in forest habitats as a consequence of urbanization, namely size and isolation of habitat patches, and other within-patch characteristics. We selected 42 woodland patches in a gradient from a semi-natural rural landscape to the city centre of Poznań (Western Poland in spring 2010. Both species richness and abundance of woodpeckers correlated positively to woodland patch area and negatively to increasing urbanization. Abundance of woodpeckers was also positively correlated with shrub cover and percentage of deciduous tree species. Furthermore, species richness and abundance of woodpeckers were highest at moderate values of canopy openness. Ordination analyses confirmed that urbanization level and woodland patch area were variables contributing most to species abundance in the woodpecker community. Similar results were obtained in presence-absence models for particular species. Thus, to sustain woodpecker species within cities it is important to keep woodland patches large, multi-layered and rich in deciduous tree species.

  3. Urbanization level and woodland size are major drivers of woodpecker species richness and abundance.

    Science.gov (United States)

    Myczko, Lukasz; Rosin, Zuzanna M; Skórka, Piotr; Tryjanowski, Piotr

    2014-01-01

    Urbanization is a process globally responsible for loss of biodiversity and for biological homogenization. Urbanization may have a direct negative impact on species behaviour and indirect effects on species populations through alterations of their habitats, for example patch size and habitat quality. Woodpeckers are species potentially susceptible to urbanization. These birds are mostly forest specialists and the development of urban areas in former forests may be an important factor influencing their richness and abundance, but documented examples are rare. In this study we investigated how woodpeckers responded to changes in forest habitats as a consequence of urbanization, namely size and isolation of habitat patches, and other within-patch characteristics. We selected 42 woodland patches in a gradient from a semi-natural rural landscape to the city centre of Poznań (Western Poland) in spring 2010. Both species richness and abundance of woodpeckers correlated positively to woodland patch area and negatively to increasing urbanization. Abundance of woodpeckers was also positively correlated with shrub cover and percentage of deciduous tree species. Furthermore, species richness and abundance of woodpeckers were highest at moderate values of canopy openness. Ordination analyses confirmed that urbanization level and woodland patch area were variables contributing most to species abundance in the woodpecker community. Similar results were obtained in presence-absence models for particular species. Thus, to sustain woodpecker species within cities it is important to keep woodland patches large, multi-layered and rich in deciduous tree species.

  4. Species-specific differences in the accumulation features of organohalogen contaminants and their metabolites in the blood of Japanese terrestrial mammals

    International Nuclear Information System (INIS)

    Mizukawa, Hazuki; Nomiyama, Kei; Nakatsu, Susumu; Yachimori, Shuuji; Hayashi, Terutake; Tashiro, Yutaka; Nagano, Yasuko; Tanabe, Shinsuke

    2013-01-01

    Residue levels and patterns of polychlorinated biphenyls (PCBs), polybrominated diphenyl ethers (PBDEs), their hydroxylated metabolites (OH-PCBs, OH-PBDEs), and methoxylated PBDEs (MeO-PBDEs) in the blood of various terrestrial mammals in Japan, including cats, raccoon dogs, dogs, masked palm civets, foxes, raccoons, badgers, and mongooses were determined. Tri- through penta-chlorinated OH-PCBs were predominant in cat blood, whereas hexa- through octa-chlorinated OH-PCBs were found in other species. High proportion of BDE209 was found in all species, suggesting exposure to municipal waste and soil containing higher levels of deca-BDE products. 6OH-/MeO-BDE47 and 2′OH-/MeO-BDE68 were dominant in all terrestrial mammals. This is first report on the detection of OH-/MeO-PBDEs in the blood of terrestrial mammals. High concentrations of OH-/MeO-PBDEs were found in cats, suggesting the intake of these compounds from seafood. Cats exhibited higher accumulation and specific patterns of OH-PCBs, OH-PBDEs, and MeO-PBDEs, they may be at a high risk from these metabolites. -- Highlights: ► Analysis of organohalogen metabolites in the blood of Japanese terrestrial mammals. ► First study on analysis of OH-/MeO-PBDEs in terrestrial mammals. ► Cats showed specific residue pattern of OH-PCBs compare to other species. ► Metabolic capacities of PCBs in carnivore were higher than marine mammals. ► Marine natural occurrence OH-/MeO-PBDEs were found in terrestrial mammals. -- Cats showed specific residue pattern of OH-PCBs compare to other species and marine natural occurrence OH-/MeO-PBDEs were detected in terrestrial mammals

  5. Species richness of vascular plants along the climatic range of the Spanish dehesas at two spatial scales

    Directory of Open Access Journals (Sweden)

    Jose M. Garcia del Barrio

    2014-04-01

    Full Text Available Aims of study: The goals of this paper are to summarize and to compare plant species richness and floristic similarity at two spatial scales; mesohabitat (normal, eutrophic, and oligotrophic dehesas and dehesa habitat; and to establish guidelines for conserving species diversity in dehesas.Area of study: We considered four dehesa sites in the western Peninsular Spain, located along a climatic and biogeographic gradient from north to south. Main results: Average alpha richness for mesohabitats was 75.6 species, and average alpha richness for dehesa sites was 146.3. Gamma richness assessed for the overall dehesa habitat was 340.0 species. The species richness figures of normal dehesa mesohabitat were significantly lesser than of the eutrophic mesohabitat and lesser than the oligotrophic mesohabitat too. No significant differences were found for species richness among dehesa sites. We have found more dissimilarity at local scale (mesohabitat than at regional scale (habitat. Finally, the results of the similarity assessment between dehesa sites reflected both climatic and biogeographic gradients.Research highlights: An effective conservation of dehesas must take into account local and regional conditions all along their distribution range for ensuring the conservation of the main vascular plant species assemblages as well as the associated fauna.Keywords: Agroforestry systems; mesohabitat; non-parametric estimators; alpha richness; gamma richness; floristic similarity; climatic and biogeographic range.

  6. Effects of trophic skewing of species richness on ecosystem functioning in a diverse marine community.

    Directory of Open Access Journals (Sweden)

    Pamela L Reynolds

    Full Text Available Widespread overharvesting of top consumers of the world's ecosystems has "skewed" food webs, in terms of biomass and species richness, towards a generally greater domination at lower trophic levels. This skewing is exacerbated in locations where exotic species are predominantly low-trophic level consumers such as benthic macrophytes, detritivores, and filter feeders. However, in some systems where numerous exotic predators have been added, sometimes purposefully as in many freshwater systems, food webs are skewed in the opposite direction toward consumer dominance. Little is known about how such modifications to food web topology, e.g., changes in the ratio of predator to prey species richness, affect ecosystem functioning. We experimentally measured the effects of trophic skew on production in an estuarine food web by manipulating ratios of species richness across three trophic levels in experimental mesocosms. After 24 days, increasing macroalgal richness promoted both plant biomass and grazer abundance, although the positive effect on plant biomass disappeared in the presence of grazers. The strongest trophic cascade on the experimentally stocked macroalgae emerged in communities with a greater ratio of prey to predator richness (bottom-rich food webs, while stronger cascades on the accumulation of naturally colonizing algae (primarily microalgae with some early successional macroalgae that recruited and grew in the mesocosms generally emerged in communities with greater predator to prey richness (the more top-rich food webs. These results suggest that trophic skewing of species richness and overall changes in food web topology can influence marine community structure and food web dynamics in complex ways, emphasizing the need for multitrophic approaches to understand the consequences of marine extinctions and invasions.

  7. Does species richness affect fine root biomass and production in young forest plantations?

    Science.gov (United States)

    Domisch, Timo; Finér, Leena; Dawud, Seid Muhie; Vesterdal, Lars; Raulund-Rasmussen, Karsten

    2015-02-01

    Tree species diversity has been reported to increase forest ecosystem above-ground biomass and productivity, but little is known about below-ground biomass and production in diverse mixed forests compared to single-species forests. For testing whether species richness increases below-ground biomass and production and thus complementarity between forest tree species in young stands, we determined fine root biomass and production of trees and ground vegetation in two experimental plantations representing gradients in tree species richness. Additionally, we measured tree fine root length and determined species composition from fine root biomass samples with the near-infrared reflectance spectroscopy method. We did not observe higher biomass or production in mixed stands compared to monocultures. Neither did we observe any differences in tree root length or fine root turnover. One reason for this could be that these stands were still young, and canopy closure had not always taken place, i.e. a situation where above- or below-ground competition did not yet exist. Another reason could be that the rooting traits of the tree species did not differ sufficiently to support niche differentiation. Our results suggested that functional group identity (i.e. conifers vs. broadleaved species) can be more important for below-ground biomass and production than the species richness itself, as conifers seemed to be more competitive in colonising the soil volume, compared to broadleaved species.

  8. Avian species richness in relation to intensive forest management practices in early seral tree plantations.

    Science.gov (United States)

    Jones, Jay E; Kroll, Andrew J; Giovanini, Jack; Duke, Steven D; Ellis, Tana M; Betts, Matthew G

    2012-01-01

    Managers of landscapes dedicated to forest commodity production require information about how practices influence biological diversity. Individual species and communities may be threatened if management practices truncate or simplify forest age classes that are essential for reproduction and survival. For instance, the degradation and loss of complex diverse forest in young age classes have been associated with declines in forest-associated Neotropical migrant bird populations in the Pacific Northwest, USA. These declines may be exacerbated by intensive forest management practices that reduce hardwood and broadleaf shrub cover in order to promote growth of economically valuable tree species in plantations. We used a Bayesian hierarchical model to evaluate relationships between avian species richness and vegetation variables that reflect stand management intensity (primarily via herbicide application) on 212 tree plantations in the Coast Range, Oregon, USA. Specifically, we estimated the influence of broadleaf hardwood vegetation cover, which is reduced through herbicide applications, on bird species richness and individual species occupancy. Our model accounted for imperfect detection. We used average predictive comparisons to quantify the degree of association between vegetation variables and species richness. Both conifer and hardwood cover were positively associated with total species richness, suggesting that these components of forest stand composition may be important predictors of alpha diversity. Estimates of species richness were 35-80% lower when imperfect detection was ignored (depending on covariate values), a result that has critical implications for previous efforts that have examined relationships between forest composition and species richness. Our results revealed that individual and community responses were positively associated with both conifer and hardwood cover. In our system, patterns of bird community assembly appear to be associated with

  9. Improved fatty acid analysis of conjugated linoleic acid rich egg yolk triacylglycerols and phospholipid species.

    Science.gov (United States)

    Shinn, Sara; Liyanage, Rohana; Lay, Jack; Proctor, Andrew

    2014-07-16

    Reports from chicken conjugated linoleic acid (CLA) feeding trials are limited to yolk total fatty acid composition, which consistently described increased saturated fatty acids and decreased monounsaturated fatty acids. However, information on CLA triacylglycerol (TAG) and phospholipid (PL) species is limited. This study determined the fatty acid composition of total lipids in CLA-rich egg yolk produced with CLA-rich soy oil, relative to control yolks using gas chromatography with flame ionization detection (GC-FID), determined TAG and PL fatty acid compositions by thin-layer chromatography-GC-FID (TLC-GC-FID), identified intact PL and TAG species by TLC-matrix-assisted laser desorption/ionization mass spectrometry (TLC-MALDI-MS), and determined the composition of TAG and PL species in CLA and control yolks by direct flow infusion electrospray ionization MS (DFI ESI-MS). In total, 2 lyso-phosphatidyl choline (LPC) species, 1 sphingomyelin species, 17 phosphatidyl choline species, 19 TAG species, and 9 phosphatidyl ethanolamine species were identified. Fifty percent of CLA was found in TAG, occurring predominantly in C52:5 and C52:4 TAG species. CLA-rich yolks contained significantly more LPC than did control eggs. Comprehensive lipid profiling may provide insight on relationships between lipid composition and the functional properties of CLA-rich eggs.

  10. Environmental and spatial controls of palm (Arecaceae) species richness across the Americas

    DEFF Research Database (Denmark)

    Bjorholm, Stine; Svenning, Jens-Christian; Skov, Flemming

    2005-01-01

    Our analysis suggests that in the Americas, palm species richness at spatial scales from 1° to 10° is most strongly controlled by water availability, although unknown broad-scale factors, perhaps soil, historical processes or geometric constraints, are also important.......Our analysis suggests that in the Americas, palm species richness at spatial scales from 1° to 10° is most strongly controlled by water availability, although unknown broad-scale factors, perhaps soil, historical processes or geometric constraints, are also important....

  11. Explaining the species richness of birds along a subtropical elevational gradient in the Hengduan Mountains

    DEFF Research Database (Denmark)

    Wu, Yongjie; Colwell, Robert K.; Rahbek, Carsten

    2013-01-01

    AimTo document the species richness pattern of birds in the Hengduan Mountains and to understand its causes. LocationHengduan Mountains, China. MethodsSpecies richness of 738 breeding bird species was calculated for each 100-m elevational band along a gradient from 100 to 6000m a.s.l. Climate data...... were compiled based on monthly records from 182 meteorological stations in the Hengduan Mountains from 1959 to 2004. We calculated the planimetric area, predicted richness under geometric constraints, three-year average NDVI (normalized difference vegetation index) and EVI (enhanced vegetation index...... that climatic and energy factors correlate well with the richness pattern of birds, and that on the surveyed subtropical mountain, the elevational bands with highest seasonality harbour fewer species than areas with less seasonal variation in temperature. The results, however, vary somewhat among taxonomic...

  12. Intransitive competition is widespread in plant communities and maintains their species richness.

    Science.gov (United States)

    Soliveres, Santiago; Maestre, Fernando T; Ulrich, Werner; Manning, Peter; Boch, Steffen; Bowker, Matthew A; Prati, Daniel; Delgado-Baquerizo, Manuel; Quero, José L; Schöning, Ingo; Gallardo, Antonio; Weisser, Wolfgang; Müller, Jörg; Socher, Stephanie A; García-Gómez, Miguel; Ochoa, Victoria; Schulze, Ernst-Detlef; Fischer, Markus; Allan, Eric

    2015-08-01

    Intransitive competition networks, those in which there is no single best competitor, may ensure species coexistence. However, their frequency and importance in maintaining diversity in real-world ecosystems remain unclear. We used two large data sets from drylands and agricultural grasslands to assess: (1) the generality of intransitive competition, (2) intransitivity-richness relationships and (3) effects of two major drivers of biodiversity loss (aridity and land-use intensification) on intransitivity and species richness. Intransitive competition occurred in > 65% of sites and was associated with higher species richness. Intransitivity increased with aridity, partly buffering its negative effects on diversity, but was decreased by intensive land use, enhancing its negative effects on diversity. These contrasting responses likely arise because intransitivity is promoted by temporal heterogeneity, which is enhanced by aridity but may decline with land-use intensity. We show that intransitivity is widespread in nature and increases diversity, but it can be lost with environmental homogenisation. © 2015 John Wiley & Sons Ltd/CNRS.

  13. Functional diversity supports the physiological tolerance hypothesis for plant species richness along climatic gradients

    Science.gov (United States)

    Spasojevic, Marko J.; Grace, James B.; Harrison, Susan; Damschen, Ellen Ingman

    2013-01-01

    1. The physiological tolerance hypothesis proposes that plant species richness is highest in warm and/or wet climates because a wider range of functional strategies can persist under such conditions. Functional diversity metrics, combined with statistical modeling, offer new ways to test whether diversity-environment relationships are consistent with this hypothesis. 2. In a classic study by R. H. Whittaker (1960), herb species richness declined from mesic (cool, moist, northerly) slopes to xeric (hot, dry, southerly) slopes. Building on this dataset, we measured four plant functional traits (plant height, specific leaf area, leaf water content and foliar C:N) and used them to calculate three functional diversity metrics (functional richness, evenness, and dispersion). We then used a structural equation model to ask if ‘functional diversity’ (modeled as the joint responses of richness, evenness, and dispersion) could explain the observed relationship of topographic climate gradients to species richness. We then repeated our model examining the functional diversity of each of the four traits individually. 3. Consistent with the physiological tolerance hypothesis, we found that functional diversity was higher in more favorable climatic conditions (mesic slopes), and that multivariate functional diversity mediated the relationship of the topographic climate gradient to plant species richness. We found similar patterns for models focusing on individual trait functional diversity of leaf water content and foliar C:N. 4. Synthesis. Our results provide trait-based support for the physiological tolerance hypothesis, suggesting that benign climates support more species because they allow for a wider range of functional strategies.

  14. Terrestrial Species in Protected Areas and Community-Managed Lands in Arunachal Pradesh, Northeast India

    Directory of Open Access Journals (Sweden)

    Nandini Velho

    2016-10-01

    Full Text Available Protected areas (including areas that are nominally fully protected and those managed for multiple uses encompass about a quarter of the total tropical forest estate. Despite growing interest in the relative value of community-managed lands and protected areas, knowledge about the biodiversity value that each sustains remains scarce in the biodiversity-rich tropics. We investigated the species occurrence of a suite of mammal and pheasant species across four protected areas and nearby community-managed lands in a biodiversity hotspot in northeast India. Over 2.5 years we walked 98 transects (half of which were resampled on a second occasion across the four paired sites. In addition, we interviewed 84 key informants to understand their perceptions of species trends in these two management regimes. We found that protected areas had higher overall species richness and were important for species that were apparently declining in occurrence. On a site-specific basis, community-managed lands had species richness and occurrences comparable to those of a protected area, and in one case their relative abundances of mammals were higher. Interviewees indicated declines in the abundances of larger-bodied species in community-managed lands. Their observations agreed with our field surveys for certain key, large-bodied species, such as gaur and sambar, which generally occurred less in community-managed lands. Hence, the degree to which protected areas and community-managed lands protect wildlife species depends upon the species in question, with larger-bodied species usually faring better within protected areas.

  15. Establishing macroecological trait datasets: digitalization, extrapolation, and validation of diet preferences in terrestrial mammals worldwide.

    Science.gov (United States)

    Kissling, Wilm Daniel; Dalby, Lars; Fløjgaard, Camilla; Lenoir, Jonathan; Sandel, Brody; Sandom, Christopher; Trøjelsgaard, Kristian; Svenning, Jens-Christian

    2014-07-01

    Ecological trait data are essential for understanding the broad-scale distribution of biodiversity and its response to global change. For animals, diet represents a fundamental aspect of species' evolutionary adaptations, ecological and functional roles, and trophic interactions. However, the importance of diet for macroevolutionary and macroecological dynamics remains little explored, partly because of the lack of comprehensive trait datasets. We compiled and evaluated a comprehensive global dataset of diet preferences of mammals ("MammalDIET"). Diet information was digitized from two global and cladewide data sources and errors of data entry by multiple data recorders were assessed. We then developed a hierarchical extrapolation procedure to fill-in diet information for species with missing information. Missing data were extrapolated with information from other taxonomic levels (genus, other species within the same genus, or family) and this extrapolation was subsequently validated both internally (with a jack-knife approach applied to the compiled species-level diet data) and externally (using independent species-level diet information from a comprehensive continentwide data source). Finally, we grouped mammal species into trophic levels and dietary guilds, and their species richness as well as their proportion of total richness were mapped at a global scale for those diet categories with good validation results. The success rate of correctly digitizing data was 94%, indicating that the consistency in data entry among multiple recorders was high. Data sources provided species-level diet information for a total of 2033 species (38% of all 5364 terrestrial mammal species, based on the IUCN taxonomy). For the remaining 3331 species, diet information was mostly extrapolated from genus-level diet information (48% of all terrestrial mammal species), and only rarely from other species within the same genus (6%) or from family level (8%). Internal and external

  16. Forest Fragments Surrounded by Sugar Cane Are More Inhospitable to Terrestrial Amphibian Abundance Than Fragments Surrounded by Pasture

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    Paula Eveline Ribeiro D’Anunciação

    2013-01-01

    Full Text Available In recent years, there has been increasing interest in matrix-type influence on forest fragments. Terrestrial amphibians are good bioindicators for this kind of research because of low vagility and high philopatry. This study compared richness, abundance, and species composition of terrestrial amphibians through pitfall traps in two sets of semideciduous seasonal forest fragments in southeastern Brazil, according to the predominant surrounding matrix (sugar cane and pasture. There were no differences in richness, but fragments surrounded by sugar cane had the lowest abundance of amphibians, whereas fragments surrounded by pastures had greater abundance. The most abundant species, Rhinella ornata, showed no biometric differences between fragment groups but like many other amphibians sampled showed very low numbers of individuals in fragments dominated by sugar cane fields. Our data indicate that the sugar cane matrix negatively influences the community of amphibians present in fragments surrounded by this type of land use.

  17. An evaluation of species richness estimators for tardigrades of the Great Smoky Mountains National Park, Tennessee and North Carolina, USA

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    Diane R. NELSON

    2007-09-01

    Full Text Available For the past 5 years we have been conducting a large-scale, multi-habitat inventory of the tardigrades in the Great Smoky Mountains National Park (U.S.A. as part of the All Taxa Biodiversity Inventory (ATBI (see www.dlia.org. In terrestrial habitats, we collected moss, lichen, and soil samples from 19 permanent ATBI plots, representing all major land cover types within the park. Each ATBI plot is 100 × 100 m. In each plot, when available, 16 moss samples, 16 lichen samples, and 4 soil samples were collected in paper bags and air dried in the laboratory. Specimens were isolated with LudoxAM centrifugation, and for each sample up to 50 adults plus eggs were individually mounted on microscope slides in Hoyer's medium and identified using phase contrast and DIC microscopy. Additional collections were made in the limestone caves of the Cades Cove region of the park, bird nests, and 13 different streams. To date (1-Jun-06, 589 samples have been collected, and of these 401 have been analyzed, yielding a total of 8133 identifiable tardigrades or, in some cases, species groups. A total of 73 species have been found in the park, 14 of which we believe are new to science. Seven species richness estimators have been developed to predict total species richness (see EstimateS 7.5 software, viceroy.eeb.uconn.edu/estimates, and these were evaluated by comparing predictions from half of our data to the actual numbers from the total database. The results of this comparison indicate that different estimators work best in different habitats. Using the best estimators in each habitat, EstimateS 7.5 indicates that a total of 96 species are likely to occur throughout the park. Thus, Great Smoky Mountains National Park tardigrade diversity represents 10% of the world's known tardigrade fauna.

  18. Productivity is a poor predictor of plant species richness

    Science.gov (United States)

    Adler, Peter B.; Seabloom, Eric W.; Borer, Elizabeth T.; Hillebrand, Helmut; Hautier, Yann; Hector, Andy; Harpole, W. Stanley; O'Halloran, Lydia R.; Grace, James B.; Anderson, T. Michael; Bakker, Jonathan D.; Biederman, Lori A.; Brown, Cynthia S.; Buckley, Yvonne M.; Calabrese, Laura B.; Chu, Cheng-Jin; Cleland, Elsa E.; Collins, Scott L.; Cottingham, Kathryn L.; Crawley, Michael J.; Damschen, Ellen Ingman; Davies, Kendi F.; DeCrappeo, Nicole M.; Fay, Philip A.; Firn, Jennifer; Frater, Paul; Gasarch, Eve I.; Gruner, Daneil S.; Hagenah, Nicole; Lambers, Janneke Hille Ris; Humphries, Hope; Jin, Virginia L.; Kay, Adam D.; Kirkman, Kevin P.; Klein, Julia A.; Knops, Johannes M.H.; La Pierre, Kimberly J.; Lambrinos, John G.; Li, Wei; MacDougall, Andrew S.; McCulley, Rebecca L.; Melbourne, Brett A.; Mitchell, Charles E.; Moore, Joslin L.; Morgan, John W.; Mortensen, Brent; Orrock, John L.; Prober, Suzanne M.; Pyke, David A.; Risch, Anita C.; Schuetz, Martin; Smith, Melinda D.; Stevens, Carly J.; Sullivan, Lauren L.; Wang, Gang; Wragg, Peter D.; Wright, Justin P.; Yang, Louie H.

    2011-01-01

    For more than 30 years, the relationship between net primary productivity and species richness has generated intense debate in ecology about the processes regulating local diversity. The original view, which is still widely accepted, holds that the relationship is hump-shaped, with richness first rising and then declining with increasing productivity. Although recent meta-analyses questioned the generality of hump-shaped patterns, these syntheses have been criticized for failing to account for methodological differences among studies. We addressed such concerns by conducting standardized sampling in 48 herbaceous-dominated plant communities on five continents. We found no clear relationship between productivity and fine-scale (meters-2) richness within sites, within regions, or across the globe. Ecologists should focus on fresh, mechanistic approaches to understanding the multivariate links between productivity an

  19. Richness of lichen species, especially of threatened ones, is promoted by management methods furthering stand continuity.

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    Steffen Boch

    Full Text Available Lichens are a key component of forest biodiversity. However, a comprehensive study analyzing lichen species richness in relation to several management types, extending over different regions and forest stages and including information on site conditions is missing for temperate European forests. In three German regions (Schwäbische Alb, Hainich-Dün, Schorfheide-Chorin, the so-called Biodiversity Exploratories, we studied lichen species richness in 631 forest plots of 400 m(2 comprising different management types (unmanaged, selection cutting, deciduous and coniferous age-class forests resulting from clear cutting or shelterwood logging, various stand ages, and site conditions, typical for large parts of temperate Europe. We analyzed how lichen species richness responds to management and habitat variables (standing biomass, cover of deadwood, cover of rocks. We found strong regional differences with highest lichen species richness in the Schwäbische Alb, probably driven by regional differences in former air pollution, and in precipitation and habitat variables. Overall, unmanaged forests harbored 22% more threatened lichen species than managed age-class forests. In general, total, corticolous, and threatened lichen species richness did not differ among management types of deciduous forests. However, in the Schwäbische-Alb region, deciduous forests had 61% more lichen species than coniferous forests and they had 279% more threatened and 76% more corticolous lichen species. Old deciduous age classes were richer in corticolous lichen species than young ones, while old coniferous age-classes were poorer than young ones. Overall, our findings highlight the importance of stand continuity for conservation. To increase total and threatened lichen species richness we suggest (1 conserving unmanaged forests, (2 promoting silvicultural methods assuring stand continuity, (3 conserving old trees in managed forests, (4 promoting stands of native deciduous

  20. Richness of Lichen Species, Especially of Threatened Ones, Is Promoted by Management Methods Furthering Stand Continuity

    Science.gov (United States)

    Boch, Steffen; Prati, Daniel; Hessenmöller, Dominik; Schulze, Ernst-Detlef; Fischer, Markus

    2013-01-01

    Lichens are a key component of forest biodiversity. However, a comprehensive study analyzing lichen species richness in relation to several management types, extending over different regions and forest stages and including information on site conditions is missing for temperate European forests. In three German regions (Schwäbische Alb, Hainich-Dün, Schorfheide-Chorin), the so-called Biodiversity Exploratories, we studied lichen species richness in 631 forest plots of 400 m2 comprising different management types (unmanaged, selection cutting, deciduous and coniferous age-class forests resulting from clear cutting or shelterwood logging), various stand ages, and site conditions, typical for large parts of temperate Europe. We analyzed how lichen species richness responds to management and habitat variables (standing biomass, cover of deadwood, cover of rocks). We found strong regional differences with highest lichen species richness in the Schwäbische Alb, probably driven by regional differences in former air pollution, and in precipitation and habitat variables. Overall, unmanaged forests harbored 22% more threatened lichen species than managed age-class forests. In general, total, corticolous, and threatened lichen species richness did not differ among management types of deciduous forests. However, in the Schwäbische-Alb region, deciduous forests had 61% more lichen species than coniferous forests and they had 279% more threatened and 76% more corticolous lichen species. Old deciduous age classes were richer in corticolous lichen species than young ones, while old coniferous age-classes were poorer than young ones. Overall, our findings highlight the importance of stand continuity for conservation. To increase total and threatened lichen species richness we suggest (1) conserving unmanaged forests, (2) promoting silvicultural methods assuring stand continuity, (3) conserving old trees in managed forests, (4) promoting stands of native deciduous tree species

  1. Effects of urbanization on carnivore species distribution and richness

    Science.gov (United States)

    Ordenana, Miguel A.; Crooks, Kevin R.; Boydston, Erin E.; Fisher, Robert N.; Lyren, Lisa M.; Siudyla, Shalene; Haas, Christopher D.; Harris, Sierra; Hathaway, Stacie A.; Turschak, Greta M.; Miles, A. Keith; Van Vuren, Dirk H.

    2010-01-01

    Urban development can have multiple effects on mammalian carnivore communities. We conducted a meta-analysis of 7,929 photographs from 217 localities in 11 camera-trap studies across coastal southern California to describe habitat use and determine the effects of urban proximity (distance to urban edge) and intensity (percentage of area urbanized) on carnivore occurrence and species richness in natural habitats close to the urban boundary. Coyotes (Canis latrans) and bobcats (Lynx rufus) were distributed widely across the region. Domestic dogs (Canis lupus familiaris), striped skunks (Mephitis mephitis), raccoons (Procyon lotor), gray foxes (Urocyon cinereoargenteus), mountain lions (Puma concolor), and Virginia opossums (Didelphis virginiana) were detected less frequently, and long-tailed weasels (Mustela frenata), American badgers (Taxidea taxus), western spotted skunks (Spilogale gracilis), and domestic cats (Felis catus) were detected rarely. Habitat use generally reflected availability for most species. Coyote and raccoon occurrence increased with both proximity to and intensity of urbanization, whereas bobcat, gray fox, and mountain lion occurrence decreased with urban proximity and intensity. Domestic dogs and Virginia opossums exhibited positive and weak negative relationships, respectively, with urban intensity but were unaffected by urban proximity. Striped skunk occurrence increased with urban proximity but decreased with urban intensity. Native species richness was negatively associated with urban intensity but not urban proximity, probably because of the stronger negative response of individual species to urban intensity.

  2. Pollinator species richness: Are the declines slowing down?

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    Tom J. M. Van Dooren

    2016-09-01

    Full Text Available Changes in pollinator abundances and diversity are of major concern. A recent study inferred that pollinator species richnesses are decreasing more slowly in recent decades in several taxa and European countries. A more careful interpretation of these results reveals that this conclusion cannot be drawn and that we can only infer that declines decelerate for bees (Anthophila in the Netherlands.

  3. Differential responses of soil bacteria, fungi, archaea and protists to plant species richness and plant functional group identity.

    Science.gov (United States)

    Dassen, Sigrid; Cortois, Roeland; Martens, Henk; de Hollander, Mattias; Kowalchuk, George A; van der Putten, Wim H; De Deyn, Gerlinde B

    2017-08-01

    Plants are known to influence belowground microbial community structure along their roots, but the impacts of plant species richness and plant functional group (FG) identity on microbial communities in the bulk soil are still not well understood. Here, we used 454-pyrosequencing to analyse the soil microbial community composition in a long-term biodiversity experiment at Jena, Germany. We examined responses of bacteria, fungi, archaea, and protists to plant species richness (communities varying from 1 to 60 sown species) and plant FG identity (grasses, legumes, small herbs, tall herbs) in bulk soil. We hypothesized that plant species richness and FG identity would alter microbial community composition and have a positive impact on microbial species richness. Plant species richness had a marginal positive effect on the richness of fungi, but we observed no such effect on bacteria, archaea and protists. Plant species richness also did not have a large impact on microbial community composition. Rather, abiotic soil properties partially explained the community composition of bacteria, fungi, arbuscular mycorrhizal fungi (AMF), archaea and protists. Plant FG richness did not impact microbial community composition; however, plant FG identity was more effective. Bacterial richness was highest in legume plots and lowest in small herb plots, and AMF and archaeal community composition in legume plant communities was distinct from that in communities composed of other plant FGs. We conclude that soil microbial community composition in bulk soil is influenced more by changes in plant FG composition and abiotic soil properties, than by changes in plant species richness per se. © 2017 The Authors. Molecular Ecology Published by John Wiley & Sons Ltd.

  4. Model uncertainties do not affect observed patterns of species richness in the Amazon

    Science.gov (United States)

    Sales, Lilian Patrícia; Neves, Olívia Viana; De Marco, Paulo

    2017-01-01

    Background Climate change is arguably a major threat to biodiversity conservation and there are several methods to assess its impacts on species potential distribution. Yet the extent to which different approaches on species distribution modeling affect species richness patterns at biogeographical scale is however unaddressed in literature. In this paper, we verified if the expected responses to climate change in biogeographical scale—patterns of species richness and species vulnerability to climate change—are affected by the inputs used to model and project species distribution. Methods We modeled the distribution of 288 vertebrate species (amphibians, birds and mammals), all endemic to the Amazon basin, using different combinations of the following inputs known to affect the outcome of species distribution models (SDMs): 1) biological data type, 2) modeling methods, 3) greenhouse gas emission scenarios and 4) climate forecasts. We calculated uncertainty with a hierarchical ANOVA in which those different inputs were considered factors. Results The greatest source of variation was the modeling method. Model performance interacted with data type and modeling method. Absolute values of variation on suitable climate area were not equal among predictions, but some biological patterns were still consistent. All models predicted losses on the area that is climatically suitable for species, especially for amphibians and primates. All models also indicated a current East-western gradient on endemic species richness, from the Andes foot downstream the Amazon river. Again, all models predicted future movements of species upwards the Andes mountains and overall species richness losses. Conclusions From a methodological perspective, our work highlights that SDMs are a useful tool for assessing impacts of climate change on biodiversity. Uncertainty exists but biological patterns are still evident at large spatial scales. As modeling methods are the greatest source of

  5. Historical dynamics and current environmental effects explain the spatial distribution of species richness patterns of New World monkeys

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    Paulo Vallejos-Garrido

    2017-09-01

    Full Text Available Background Why biodiversity is not uniformly distributed on the Earth is a major research question of biogeography. One of the most striking patterns of disparity in species distribution are the biodiversity hotspots, which generally do not fit with the distribution of relevant components of the Neotropical biota. In this study, we assess the proximal causes of the species-richness pattern of one of the most conspicuous groups of Neotropical mammals, the New World monkeys the Platyrrhini. We test two complementary hypotheses: (1 there is a historical source-sink dynamic (addressed using macroevolutionary and macroecological approaches; (2 the large number of species in the Amazon basin is due to the constraints imposed by environmental variables occurring outside this area. Methods We first characterize spatial patterns of species richness and biodiversity hotspots using a new, objective protocol based on probabilities. Then we evaluate the source-sink hypothesis using BioGeoBEARS analysis and nestedness analysis of species richness patterns. Complementarily, to measure how often different species pairs appear in the same sites, we used null models to estimate the checkerboard score index (C-score. Finally, we evaluate the relationship between several climatic variables and species richness through ordinary least squares (OLS and spatial autoregressive (SAR models, and the potential environmental constraints on the pattern. Results We found one significant cluster of high values for species richness in the Amazon basin. Most dispersal events occurred from the Amazonian subregion to other Neotropical areas. Temperature (T, discrepancy (BR, and NODF indexes show a significant nesting in the matrix ordered by species richness and available energy. The C-score observed was significantly smaller than the null expectation for all sites in the Neotropics where there are records of platyrrhine species. Ten climatic variables comprised the best

  6. Quantifying the effects of the break up of Pangaea on global terrestrial diversification with neutral theory.

    Science.gov (United States)

    Jordan, Sean M R; Barraclough, Timothy G; Rosindell, James

    2016-04-05

    The historic richness of most taxonomic groups increases substantially over geological time. Explanations for this fall broadly into two categories: bias in the fossil record and elevated net rates of diversification in recent periods. For example, the break up of Pangaea and isolation between continents might have increased net diversification rates. In this study, we investigate the effect on terrestrial diversification rates of the increased isolation between land masses brought about by continental drift. We use ecological neutral theory as a means to study geologically complex scenarios tractably. Our models show the effects of simulated geological events that affect all species equally, without the added complexity of further ecological processes. We find that continental drift leads to an increase in diversity only where isolation between continents leads to additional speciation through vicariance, and where higher taxa with very low global diversity are considered. We conclude that continental drift by itself is not sufficient to account for the increase in terrestrial species richness observed in the fossil record. © 2016 The Authors.

  7. Does species richness affect fine root biomass and production in young forest plantations?

    DEFF Research Database (Denmark)

    Domisch, Timo; Finér, Leena; Dawud, Seid Muhie

    2015-01-01

    Tree species diversity has been reported to increase forest ecosystem above-ground biomass and productivity, but little is known about below-ground biomass and production in diverse mixed forests compared to single-species forests. For testing whether species richness increases below-ground biomass...... and production and thus complementarity between forest tree species in young stands, we determined fine root biomass and production of trees and ground vegetation in two experimental plantations representing gradients in tree species richness. Additionally, we measured tree fine root length and determined...... be that these stands were still young, and canopy closure had not always taken place, i.e. a situation where above- or below-ground competition did not yet exist. Another reason could be that the rooting traits of the tree species did not differ sufficiently to support niche differentiation. Our results suggested...

  8. Evolutionary patterns of range size, abundance and species richness in Amazonian angiosperm trees

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    Kyle Dexter

    2016-09-01

    Full Text Available Amazonian tree species vary enormously in their total abundance and range size, while Amazonian tree genera vary greatly in species richness. The drivers of this variation are not well understood. Here, we construct a phylogenetic hypothesis that represents half of Amazonian tree genera in order to contribute to explaining the variation. We find several clear, broad-scale patterns. Firstly, there is significant phylogenetic signal for all three characteristics; closely related genera tend to have similar numbers of species and similar mean range size and abundance. Additionally, the species richness of genera shows a significant, negative relationship with the mean range size and abundance of their constituent species. Our results suggest that phylogenetically correlated intrinsic factors, namely traits of the genera themselves, shape among lineage variation in range size, abundance and species richness. We postulate that tree stature may be one particularly relevant trait. However, other traits may also be relevant, and our study reinforces the need for ambitious compilations of trait data for Amazonian trees. In the meantime, our study shows how large-scale phylogenies can help to elucidate, and contribute to explaining, macroecological and macroevolutionary patterns in hyperdiverse, yet poorly understood regions like the Amazon Basin.

  9. Diversity, distribution and conservation of the terrestrial reptiles of Oman (Sauropsida, Squamata)

    Science.gov (United States)

    Xipell, Meritxell; Tarroso, Pedro; Gardner, Andrew; Arnold, Edwin Nicholas; Robinson, Michael D.; Simó-Riudalbas, Marc; Vasconcelos, Raquel; de Pous, Philip; Amat, Fèlix; Šmíd, Jiří; Sindaco, Roberto; Els, Johannes; Pleguezuelos, Juan Manuel; Machado, Luis; Donaire, David; Martínez, Gabriel; Garcia-Porta, Joan; Mazuch, Tomáš; Wilms, Thomas; Gebhart, Jürgen; Aznar, Javier; Gallego, Javier; Zwanzig, Bernd-Michael; Fernández-Guiberteau, Daniel; Papenfuss, Theodore; Al Saadi, Saleh; Alghafri, Ali; Khalifa, Sultan; Al Farqani, Hamed; Bait Bilal, Salim; Alazri, Iman Sulaiman; Al Adhoobi, Aziza Saud; Al Omairi, Zeyana Salim; Al Shariani, Mohammed; Al Kiyumi, Ali; Al Sariri, Thuraya; Al Shukaili, Ahmed Said; Al Akhzami, Suleiman Nasser

    2018-01-01

    In the present work, we use an exceptional database including 5,359 records of 101 species of Oman’s terrestrial reptiles together with spatial tools to infer the spatial patterns of species richness and endemicity, to infer the habitat preference of each species and to better define conservation priorities, with especial focus on the effectiveness of the protected areas in preserving this unique arid fauna. Our results indicate that the sampling effort is not only remarkable from a taxonomic point of view, with multiple observations for most species, but also for the spatial coverage achieved. The observations are distributed almost continuously across the two-dimensional climatic space of Oman defined by the mean annual temperature and the total annual precipitation and across the Principal Component Analysis (PCA) of the multivariate climatic space and are well represented within 17 out of the 20 climatic clusters grouping 10% of the explained climatic variance defined by PC1 and PC2. Species richness is highest in the Hajar and Dhofar Mountains, two of the most biodiverse areas of the Arabian Peninsula, and endemic species richness is greatest in the Jebel Akhdar, the highest part of the Hajar Mountains. Oman’s 22 protected areas cover only 3.91% of the country, including within their limits 63.37% of terrestrial reptiles and 50% of all endemics. Our analyses show that large areas of the climatic space of Oman lie outside protected areas and that seven of the 20 climatic clusters are not protected at all. The results of the gap analysis indicate that most of the species are below the conservation target of 17% or even the less restrictive 12% of their total area within a protected area in order to be considered adequately protected. Therefore, an evaluation of the coverage of the current network of protected areas and the identification of priority protected areas for reptiles using reserve design algorithms are urgently needed. Our study also shows that

  10. Diversity, distribution and conservation of the terrestrial reptiles of Oman (Sauropsida, Squamata.

    Directory of Open Access Journals (Sweden)

    Salvador Carranza

    Full Text Available In the present work, we use an exceptional database including 5,359 records of 101 species of Oman's terrestrial reptiles together with spatial tools to infer the spatial patterns of species richness and endemicity, to infer the habitat preference of each species and to better define conservation priorities, with especial focus on the effectiveness of the protected areas in preserving this unique arid fauna. Our results indicate that the sampling effort is not only remarkable from a taxonomic point of view, with multiple observations for most species, but also for the spatial coverage achieved. The observations are distributed almost continuously across the two-dimensional climatic space of Oman defined by the mean annual temperature and the total annual precipitation and across the Principal Component Analysis (PCA of the multivariate climatic space and are well represented within 17 out of the 20 climatic clusters grouping 10% of the explained climatic variance defined by PC1 and PC2. Species richness is highest in the Hajar and Dhofar Mountains, two of the most biodiverse areas of the Arabian Peninsula, and endemic species richness is greatest in the Jebel Akhdar, the highest part of the Hajar Mountains. Oman's 22 protected areas cover only 3.91% of the country, including within their limits 63.37% of terrestrial reptiles and 50% of all endemics. Our analyses show that large areas of the climatic space of Oman lie outside protected areas and that seven of the 20 climatic clusters are not protected at all. The results of the gap analysis indicate that most of the species are below the conservation target of 17% or even the less restrictive 12% of their total area within a protected area in order to be considered adequately protected. Therefore, an evaluation of the coverage of the current network of protected areas and the identification of priority protected areas for reptiles using reserve design algorithms are urgently needed. Our study

  11. Diversity, distribution and conservation of the terrestrial reptiles of Oman (Sauropsida, Squamata).

    Science.gov (United States)

    Carranza, Salvador; Xipell, Meritxell; Tarroso, Pedro; Gardner, Andrew; Arnold, Edwin Nicholas; Robinson, Michael D; Simó-Riudalbas, Marc; Vasconcelos, Raquel; de Pous, Philip; Amat, Fèlix; Šmíd, Jiří; Sindaco, Roberto; Metallinou, Margarita; Els, Johannes; Pleguezuelos, Juan Manuel; Machado, Luis; Donaire, David; Martínez, Gabriel; Garcia-Porta, Joan; Mazuch, Tomáš; Wilms, Thomas; Gebhart, Jürgen; Aznar, Javier; Gallego, Javier; Zwanzig, Bernd-Michael; Fernández-Guiberteau, Daniel; Papenfuss, Theodore; Al Saadi, Saleh; Alghafri, Ali; Khalifa, Sultan; Al Farqani, Hamed; Bait Bilal, Salim; Alazri, Iman Sulaiman; Al Adhoobi, Aziza Saud; Al Omairi, Zeyana Salim; Al Shariani, Mohammed; Al Kiyumi, Ali; Al Sariri, Thuraya; Al Shukaili, Ahmed Said; Al Akhzami, Suleiman Nasser

    2018-01-01

    In the present work, we use an exceptional database including 5,359 records of 101 species of Oman's terrestrial reptiles together with spatial tools to infer the spatial patterns of species richness and endemicity, to infer the habitat preference of each species and to better define conservation priorities, with especial focus on the effectiveness of the protected areas in preserving this unique arid fauna. Our results indicate that the sampling effort is not only remarkable from a taxonomic point of view, with multiple observations for most species, but also for the spatial coverage achieved. The observations are distributed almost continuously across the two-dimensional climatic space of Oman defined by the mean annual temperature and the total annual precipitation and across the Principal Component Analysis (PCA) of the multivariate climatic space and are well represented within 17 out of the 20 climatic clusters grouping 10% of the explained climatic variance defined by PC1 and PC2. Species richness is highest in the Hajar and Dhofar Mountains, two of the most biodiverse areas of the Arabian Peninsula, and endemic species richness is greatest in the Jebel Akhdar, the highest part of the Hajar Mountains. Oman's 22 protected areas cover only 3.91% of the country, including within their limits 63.37% of terrestrial reptiles and 50% of all endemics. Our analyses show that large areas of the climatic space of Oman lie outside protected areas and that seven of the 20 climatic clusters are not protected at all. The results of the gap analysis indicate that most of the species are below the conservation target of 17% or even the less restrictive 12% of their total area within a protected area in order to be considered adequately protected. Therefore, an evaluation of the coverage of the current network of protected areas and the identification of priority protected areas for reptiles using reserve design algorithms are urgently needed. Our study also shows that more

  12. Comment on "Worldwide evidence of a unimodal relationship between productivity and plant species richness"

    Science.gov (United States)

    Tredennick, Andrew T.; Adler, Peter B.; Grace, James B.; Harpole, W Stanley; Borer, Elizabeth T.; Seabloom, Eric W.; Anderson, T. Michael; Bakker, Jonathan D.; Biederman, Lori A.; Brown, Cynthia S.; Buckley, Yvonne M.; Chu, Cheng-Jin; Collins, Scott L.; Crawley, Michael J.; Fay, Philip A.; Firn, Jennifer; Gruner, Daniel S.; Hagenah, Nicole; Hautier, Yann; Hector, Andy; Hillebrand, Helmut; Kirkman, Kevin P.; Knops, Johannes M. H.; Laungani, Ramesh; Lind, Eric M.; MacDougall, Andrew S.; McCulley, Rebecca L.; Mitchell, Charles E.; Moore, Joslin L.; Morgan, John W.; Orrock, John L.; Peri, Pablo L.; Prober, Suzanne M.; Risch, Anita C.; Schuetz, Martin; Speziale, Karina L.; Standish, Rachel J.; Sullivan, Lauren L.; Wardle, Glenda M.; Williams, Ryan J.; Yang, Louie H.

    2016-01-01

    Fraser et al. (Reports, 17 July 2015, p. 302) report a unimodal relationship between productivity and species richness at regional and global scales, which they contrast with the results of Adler et al. (Reports, 23 September 2011, p. 1750). However, both data sets, when analyzed correctly, show clearly and consistently that productivity is a poor predictor of local species richness.

  13. Richness of Ancient Forest Plant Species Indicates Suitable Habitats for Macrofungi

    Czech Academy of Sciences Publication Activity Database

    Hofmeister, J.; Hošek, J.; Brabec, Marek; Dvořák, D.; Beran, M.; Deckerová, H.; Burel, J.; Kříž, M.; Borovička, Jan; Běťák, J.; Vašutová, Martina

    2014-01-01

    Roč. 23, č. 8 (2014), s. 2015-2031 ISSN 0960-3115 Grant - others:GA MŽP(CZ) SP/2D1/146/08 Institutional support: RVO:67985807 ; RVO:67985831 ; RVO:67179843 Keywords : diversity * forest continuity * forest management * Herb-layer plant species * red-listed species * species richness * surrogacy Subject RIV: BB - Applied Statistics, Operational Research; EH - Ecology, Behaviour (GLU-S); EH - Ecology, Behaviour (UEK-B) Impact factor: 2.365, year: 2014

  14. Plant DNA barcodes can accurately estimate species richness in poorly known floras.

    Science.gov (United States)

    Costion, Craig; Ford, Andrew; Cross, Hugh; Crayn, Darren; Harrington, Mark; Lowe, Andrew

    2011-01-01

    Widespread uptake of DNA barcoding technology for vascular plants has been slow due to the relatively poor resolution of species discrimination (∼70%) and low sequencing and amplification success of one of the two official barcoding loci, matK. Studies to date have mostly focused on finding a solution to these intrinsic limitations of the markers, rather than posing questions that can maximize the utility of DNA barcodes for plants with the current technology. Here we test the ability of plant DNA barcodes using the two official barcoding loci, rbcLa and matK, plus an alternative barcoding locus, trnH-psbA, to estimate the species diversity of trees in a tropical rainforest plot. Species discrimination accuracy was similar to findings from previous studies but species richness estimation accuracy proved higher, up to 89%. All combinations which included the trnH-psbA locus performed better at both species discrimination and richness estimation than matK, which showed little enhanced species discriminatory power when concatenated with rbcLa. The utility of the trnH-psbA locus is limited however, by the occurrence of intraspecific variation observed in some angiosperm families to occur as an inversion that obscures the monophyly of species. We demonstrate for the first time, using a case study, the potential of plant DNA barcodes for the rapid estimation of species richness in taxonomically poorly known areas or cryptic populations revealing a powerful new tool for rapid biodiversity assessment. The combination of the rbcLa and trnH-psbA loci performed better for this purpose than any two-locus combination that included matK. We show that although DNA barcodes fail to discriminate all species of plants, new perspectives and methods on biodiversity value and quantification may overshadow some of these shortcomings by applying barcode data in new ways.

  15. Use of fish parasite species richness indices in analyzing anthropogenically impacted coastal marine ecosystems

    Science.gov (United States)

    Dzikowski, R.; Paperna, I.; Diamant, A.

    2003-10-01

    The diversity of fish parasite life history strategies makes these species sensitive bioindicators of aquatic ecosystem health. While monoxenous (single-host) species may persist in highly perturbed, extreme environments, this is not necessarily true for heteroxenous (multiple-host) species. As many parasites possess complex life cycles and are transmitted through a chain of host species, their dependency on the latter to complete their life cycles renders them sensitive to perturbed environments. In the present study, parasite communities of grey mullet Liza aurata and Liza ramada (Mugilidae) were investigated at two Mediterranean coastal sites in northern Israel: the highly polluted Kishon Harbor (KH) and the relatively unspoiled reference site, Ma'agan Michael (MM). Both are estuarine sites in which grey mullet are one of the most common fish species. The results indicate that fish at the polluted site had significantly less trematode metacercariae than fish at the reference site. Heteroxenous gut helminths were completely absent at the polluted sampling site. Consequently, KH fish displayed lower mean parasite species richness. At the same time, KH fish mean monoxenous parasite richness was higher, although the prevalence of different monoxenous taxa was variable. Copepods had an increased prevalence while monogenean prevalence was significantly reduced at the polluted site. This variability may be attributed to the differential susceptibility of the parasites to the toxicity of different pollutants, their concentration, the exposure time and possible synergistic effects. In this study, we used the cumulative species curve model that extrapolates "true" species richness of a given habitat as a function of increasing sample size. We considered the heteroxenous and monoxenous species separately for each site, and comparison of curves yielded significant results. It is proposed to employ this approach, originally developed for estimating the "true" parasite

  16. Species richness and distribution of chondrichthyan fishes in the Arctic Ocean and adjacent seas

    DEFF Research Database (Denmark)

    Lynghammar, A.; Christiansen, J. S.; Mecklenburg, C. W.

    2013-01-01

    The sea ice cover decreases and human activity increases in Arctic waters. Fisheries and bycatch issues, shipping and petroleum exploitation (pollution issues) make it imperative to establish biological baselines for the marine fishes inhabiting the Arctic Ocean and adjacent seas (AOAS). Species...... richness, zoogeographic affiliations and Red List statuses among chondrichthyan fishes (Chondrichthyes) were examined across 16 AOAS regions as a first step towards credible conservation actions. Published literature and museum vouchers were consulted for presence/absence data. Although many regions...... are poorly sampled, 49 chondrichthyan species have been reported from the AOAS. Skates and rays are the most species-rich taxon, represented by 27 species in family Rajidae and one species in family Dasyatidae. The sharks comprise 20 species in 13 families and the chimaeras one species in family Chimaeridae...

  17. Terrestrial mammals in an Atlantic Forest remnant, Paraná, Brazil

    Directory of Open Access Journals (Sweden)

    Gustavo Borba de Miranda

    2013-11-01

    Full Text Available The threat degree and the ecological importance of terrestrial mammals make clear the need for constantly conducting researches in order to add information to the current knowledge on this theme. This study aimed to provide a list of terrestrial mammal species in an Atlantic Forest remnant located in the Southwestern Paraná state, Brazil. Species richness and occurrence frequency were studied from April to October 2009 using two methods: direct observation and recording of traces. We registered 20 taxa distributed into 7 orders: Artiodactyla, Carnivora, Didelphimorphia, Lagomorpha, Primates, Rodentia, and Xenarthra. Among these, 4 taxa were registered either by direct observation or by recording of traces and the others were registered only through traces. The most frequently occurring species were Didelphis sp. (30.6% and Cerdocyon thous (25.6%. Out of the 20 registered taxa, Leopardus pardalis, Leopardus tigrinus, and Cuniculus paca are listed as vulnerable in the Red Book of Threatened Fauna in Parana State. Although small, the study area may assist in the availability of food and shelter for the fauna of mammals, representing an important element of the regional landscape.

  18. Spatial congruence in language and species richness but not threat in the world's top linguistic hotspot.

    Science.gov (United States)

    Turvey, Samuel T; Pettorelli, Nathalie

    2014-12-07

    Languages share key evolutionary properties with biological species, and global-level spatial congruence in richness and threat is documented between languages and several taxonomic groups. However, there is little understanding of the functional connection between diversification or extinction in languages and species, or the relationship between linguistic and species richness across different spatial scales. New Guinea is the world's most linguistically rich region and contains extremely high biological diversity. We demonstrate significant positive relationships between language and mammal richness in New Guinea across multiple spatial scales, revealing a likely functional relationship over scales at which infra-island diversification may occur. However, correlations are driven by spatial congruence between low levels of language and species richness. Regional biocultural richness may have showed closer congruence before New Guinea's linguistic landscape was altered by Holocene demographic events. In contrast to global studies, we demonstrate a significant negative correlation across New Guinea between areas with high levels of threatened languages and threatened mammals, indicating that landscape-scale threats differ between these groups. Spatial resource prioritization to conserve biodiversity may not benefit threatened languages, and conservation policy must adopt a multi-faceted approach to protect biocultural diversity as a whole.

  19. The relationship between species richness and aboveground biomass in a primary Pinus kesiya forest of Yunnan, southwestern China.

    Science.gov (United States)

    Li, Shuaifeng; Lang, Xuedong; Liu, Wande; Ou, Guanglong; Xu, Hui; Su, Jianrong

    2018-01-01

    The relationship between biodiversity and biomass is an essential element of the natural ecosystem functioning. Our research aims at assessing the effects of species richness on the aboveground biomass and the ecological driver of this relationship in a primary Pinus kesiya forest. We sampled 112 plots of the primary P. kesiya forests in Yunnan Province. The general linear model and the structural equation model were used to estimate relative effects of multivariate factors among aboveground biomass, species richness and the other explanatory variables, including climate moisture index, soil nutrient regime and stand age. We found a positive linear regression relationship between the species richness and aboveground biomass using ordinary least squares regressions. The species richness and soil nutrient regime had no direct significant effect on aboveground biomass. However, the climate moisture index and stand age had direct effects on aboveground biomass. The climate moisture index could be a better link to mediate the relationship between species richness and aboveground biomass. The species richness affected aboveground biomass which was mediated by the climate moisture index. Stand age had direct and indirect effects on aboveground biomass through the climate moisture index. Our results revealed that climate moisture index had a positive feedback in the relationship between species richness and aboveground biomass, which played an important role in a link between biodiversity maintenance and ecosystem functioning. Meanwhile, climate moisture index not only affected positively on aboveground biomass, but also indirectly through species richness. The information would be helpful in understanding the biodiversity-aboveground biomass relationship of a primary P. kesiya forest and for forest management.

  20. Elucidating differences in metal absorption efficiencies between terrestrial soft-bodied and aquatic species

    DEFF Research Database (Denmark)

    Owsianiak, Mikolaj; Veltman, Karin; Hauschild, Michael Zwicky

    2014-01-01

    species, with the covalent index being the best predictor. It is hypothesized that metal absorption by soft-bodied species in soil systems is influenced by the rate of metal supply to the membrane, while in aquatic systems accumulation is solely determined by metal affinity to membrane bound transport...... proteins. Our results imply that developing predictive terrestrial bioaccumulation and toxicity models for metals must consider metal interactions with soil solids. This may include desorption of a cation bound to soil solids through ion exchange, or metal release from soil surfaces involving breaking...

  1. Phylogenetically diverse macrophyte community promotes species diversity of mobile epi-benthic invertebrates

    Science.gov (United States)

    Nakamoto, Kenta; Hayakawa, Jun; Kawamura, Tomohiko; Kodama, Masafumi; Yamada, Hideaki; Kitagawa, Takashi; Watanabe, Yoshiro

    2018-07-01

    Various aspects of plant diversity such as species diversity and phylogenetic diversity enhance the species diversity of associated animals in terrestrial systems. In marine systems, however, the effects of macrophyte diversity on the species diversity of associated animals have received little attention. Here, we sampled in a subtropical seagrass-seaweed mixed bed to elucidate the effect of the macrophyte phylogenetic diversity based on the taxonomic relatedness as well as the macrophyte species diversity on species diversity of mobile epi-benthic invertebrates. Using regression analyses for each macrophyte parameter as well as multiple regression analyses, we found that the macrophyte phylogenetic diversity (taxonomic diversity index: Delta) positively influenced the invertebrate species richness and diversity index (H‧). Although the macrophyte species richness and H‧ also positively influenced the invertebrate species richness, the best fit model for invertebrate species richness did not include them, suggesting that the macrophyte species diversity indirectly influenced invertebrate species diversity. Possible explanations of the effects of macrophyte Delta on the invertebrate species diversity were the niche complementarity effect and the selection effect. This is the first study which demonstrates that macrophyte phylogenetic diversity has a strong effect on the species diversity of mobile epi-benthic invertebrates.

  2. Seed Density Significantly Affects Species Richness and Composition in Experimental Plant Communities

    Czech Academy of Sciences Publication Activity Database

    Münzbergová, Zuzana

    2012-01-01

    Roč. 7, č. 10 (2012), e46704 E-ISSN 1932-6203 R&D Projects: GA ČR GAP505/10/0593 Institutional support: RVO:67985939 Keywords : species richness * seed rain * species composition Subject RIV: EF - Botanics Impact factor: 3.730, year: 2012

  3. Pattern or process? Evaluating the peninsula effect as a determinant of species richness in coastal dune forests.

    Directory of Open Access Journals (Sweden)

    Pieter I Olivier

    Full Text Available The peninsula effect predicts that the number of species should decline from the base of a peninsula to the tip. However, evidence for the peninsula effect is ambiguous, as different analytical methods, study taxa, and variations in local habitat or regional climatic conditions influence conclusions on its presence. We address this uncertainty by using two analytical methods to investigate the peninsula effect in three taxa that occupy different trophic levels: trees, millipedes, and birds. We surveyed 81 tree quadrants, 102 millipede transects, and 152 bird points within 150 km of coastal dune forest that resemble a habitat peninsula along the northeast coast of South Africa. We then used spatial (trend surface analyses and non-spatial regressions (generalized linear mixed models to test for the presence of the peninsula effect in each of the three taxa. We also used linear mixed models to test if climate (temperature and precipitation and/or local habitat conditions (water availability associated with topography and landscape structural variables could explain gradients in species richness. Non-spatial models suggest that the peninsula effect was present in all three taxa. However, spatial models indicated that only bird species richness declined from the peninsula base to the peninsula tip. Millipede species richness increased near the centre of the peninsula, while tree species richness increased near the tip. Local habitat conditions explained species richness patterns of birds and trees, but not of millipedes, regardless of model type. Our study highlights the idiosyncrasies associated with the peninsula effect-conclusions on the presence of the peninsula effect depend on the analytical methods used and the taxon studied. The peninsula effect might therefore be better suited to describe a species richness pattern where the number of species decline from a broader habitat base to a narrow tip, rather than a process that drives species

  4. Does residence time affect responses of alien species richness to environmental and spatial processes?

    Directory of Open Access Journals (Sweden)

    Matteo Dainese

    2012-08-01

    Full Text Available One of the most robust emerging generalisations in invasion biology is that the probability of invasion increases with the time since introduction (residence time. We analysed the spatial distribution of alien vascular plant species in a region of north-eastern Italy to understand the influence of residence time on patterns of alien species richness. Neophytes were grouped according to three periods of arrival in the study region (1500–1800, 1800–1900, and > 1900. We applied multiple regression (spatial and non-spatial with hierarchical partitioning to determine the influence of climate and human pressure on species richness within the groups. We also applied variation partitioning to evaluate the relative importance of environmental and spatial processes. Temperature mainly influenced groups with speciesa longer residence time, while human pressure influenced the more recently introduced species, although its influence remained significant in all groups. Partial regression analyses showed that most of the variation explained by the models is attributable to spatially structured environmental variation, while environment and space had small independent effects. However, effects independent of environment decreased, and spatially independent effects increased, from older to the more recent neophytes. Our data illustrate that the distribution of alien species richness for species that arrived recently is related to propagule pressure, availability of novel niches created by human activity, and neutral-based (dispersal limitation processes, while climate filtering plays a key role in the distribution of species that arrived earlier. This study highlights the importance of residence time, spatial structure, and environmental conditions in the patterns of alien species richness and for a better understanding of its geographical variation.

  5. Study of Plant Species Richness in Habitats with Different Grazing Intensities at Golestan National Park and Surrounding Area

    Directory of Open Access Journals (Sweden)

    A. Bagheri

    2016-12-01

    Full Text Available Considering the importance of plant diversity and to evaluate the effect of grazing pressure on species richness and structure of plant communities, this experiment was conducted at Golestan National Park and its surrounding areas in the north east of Iran. Sampling was conducted in intact and abandoned habitats and habitats under seasonal and heavy grazing, using Modified Whitaker Plot in 1, 10,100 and 1000 m2 spatial scales. Results showed that the composition of plant species from different habitats was different. In addition the increasing intensity of grazing increased the importance of therophytes and decreased the role of hemicryptophytes and phanerophytes and also decreasd the amount of species richness. Mean species richness of studied habitat showed a significant difference in all four sampling spatial scales. The results showed that plant species richness decreased in the areas affected by heavy grazing and conservation against grazing plays an important role in maintaining species richness.

  6. Geography, topography, and history affect realized-to-potential tree species richness patterns in Europe

    DEFF Research Database (Denmark)

    Svenning, J.-C.; Fitzpatrick, Matthew C.; Normand, Signe

    2010-01-01

    by assembly from regional species pools. Using the European tree flora as our study system, we implemented a novel approach to assess the relative importance of local and regional mechanisms that control local species richness. We first identified species pools that tolerate particular local environments....../P richness ratio estimates, but we found consistent support for a negative effect of regional geographic fragmentation and a positive topographic effect. We also identified fairly broad support for the predicted effect of accessibility. We conclude that local tree assemblages in Europe often fail to realize...

  7. TEMPERATURE AND PRECIPITATION AS PREDICTORS OF SPECIES RICHNESS IN NORTHERN ANDEAN AMPHIBIANS FROM COLOMBIA

    Directory of Open Access Journals (Sweden)

    Ortiz-Yusty Carlos Eduardo

    2013-07-01

    Full Text Available Our objective was to explore the spatial distribution patterns of amphibian speciesrichness in Antioquia, as model for the tropical Andes, and determine how annualmean temperature, annual precipitation, and elevation range influence it. We alsobriefly compare local and global regression models for estimating the relationbetween environmental variables and species richness. Distribution maps for 223amphibian species and environmental variables were generalized onto grid mapsof 752 blocks each covering the entire Department of Antioquia. We explored therelationship between species richness and environment using two global regressionmodels (the Ordinary Least Squares “OLS” and Generalized Linear Squares“GLS” models and one local model (the Geographically Weighted Regression“GWR” model. We found a significant relationship between species richness andenvironmental variables (GLS r2: 0.869; GRW r2: 0.929. The GLS model efficientlyincorporated the spatial autocorrelation effect and handled spatial dependencein the regression error terms while the GWR model showed the best fit (r2 andbalance between number of parameters and fit (AICc. GWR parameters show widevariation within the study area, indicating that relationship between species richnessand climate is spatially complex. Temperature was the most important variablein the GLS and GWR models, and altitude range the least significant. The strongrelationship between environment and amphibian richness is possibly due to lifehistory traits of amphibians, such as ectothermy and water dependency to completethe life cycle

  8. A likely microendemic new species of terrestrial iguana, genus Chalarodon, from Madagascar.

    Science.gov (United States)

    Miralles, Aurelien; Glaw, Frank; Ratsoavina, Fanomezana M; Vences, Miguel

    2015-04-09

    A new species of the hitherto monotypic genus Chalarodon is described from southern Madagascar and a lectotype (ZMB 4360) is designated for C. madagascariensis Peters, 1854. The new species of terrestrial iguana, Chalarodon steinkampi sp. nov., is defined by several morphological characters and by concordant differentiation in mitochondrial and nuclear DNA with >5% uncorrected pairwise genetic distance in the 16S rRNA gene. It can be most clearly recognized by the presence of smooth (vs. keeled) gular and ventral scales, a spotted pattern extending from flanks onto belly, and an unpigmented throat. The new species is known from only a small area between the villages of Amboasary Sud and Esomony, located west of the Andohahela Massif, while C. madagascariensis appears to be widespread over much of southern and western Madagascar. We highlight the need for further exploration of this unprotected region which might host several other microendemic species.

  9. Responses of predatory invertebrates to seeding density and plant species richness in experimental tallgrass prairie restorations

    Science.gov (United States)

    Nemec, Kristine T.; Allen, Craig R.; Danielson, Stephen D.; Helzer, Christopher J.

    2014-01-01

    In recent decades, agricultural producers and non-governmental organizations have restored thousands of hectares of former cropland in the central United States with native grasses and forbs. However, the ability of these grassland restorations to attract predatory invertebrates has not been well documented, even though predators provide an important ecosystem service to agricultural producers by naturally regulating herbivores. This study assessed the effects of plant richness and seeding density on the richness and abundance of surface-dwelling (ants, ground beetles, and spiders) and aboveground (ladybird beetles) predatory invertebrates. In the spring of 2006, twenty-four 55 m × 55 m-plots were planted to six replicates in each of four treatments: high richness (97 species typically planted by The Nature Conservancy), at low and high seeding densities, and low richness (15 species representing a typical Natural Resources Conservation Service Conservation Reserve Program mix, CP25), at low and high seeding densities. Ants, ground beetles, and spiders were sampled using pitfall traps and ladybird beetles were sampled using sweep netting in 2007–2009. The abundance of ants, ground beetles, and spiders showed no response to seed mix richness or seeding density but there was a significant positive effect of richness on ladybird beetle abundance. Seeding density had a significant positive effect on ground beetle and spider species richness and Shannon–Weaver diversity. These results may be related to differences in the plant species composition and relative amount of grass basal cover among the treatments rather than richness.

  10. Species-energy relationship in the deep sea: A test using the Quaternary fossil record

    Science.gov (United States)

    Hunt, G.; Cronin, T. M.; Roy, K.

    2005-01-01

    Little is known about the processes regulating species richness in deep-sea communities. Here we take advantage of natural experiments involving climate change to test whether predictions of the species-energy hypothesis hold in the deep sea. In addition, we test for the relationship between temperature and species richness predicted by a recent model based on biochemical kinetics of metabolism. Using the deep-sea fossil record of benthic foraminifera and statistical meta-analyses of temperature-richness and productivity-richness relationships in 10 deep-sea cores, we show that temperature but not productivity is a significant predictor of species richness over the past c. 130 000 years. Our results not only show that the temperature-richness relationship in the deep-sea is remarkably similar to that found in terrestrial and shallow marine habitats, but also that species richness tracks temperature change over geological time, at least on scales of c. 100 000 years. Thus, predicting biotic response to global climate change in the deep sea would require better understanding of how temperature regulates the occurrences and geographical ranges of species. ??2005 Blackwell Publishing Ltd/CNRS.

  11. Impact of Precipitation Patterns on Biomass and Species Richness of Annuals in a Dry Steppe

    Science.gov (United States)

    Yan, Hong; Liang, Cunzhu; Li, Zhiyong; Liu, Zhongling; Miao, Bailing; He, Chunguang; Sheng, Lianxi

    2015-01-01

    Annuals are an important component part of plant communities in arid and semiarid grassland ecosystems. Although it is well known that precipitation has a significant impact on productivity and species richness of community or perennials, nevertheless, due to lack of measurements, especially long-term experiment data, there is little information on how quantity and patterns of precipitation affect similar attributes of annuals. This study addresses this knowledge gap by analyzing how quantity and temporal patterns of precipitation affect aboveground biomass, interannual variation aboveground biomass, relative aboveground biomass, and species richness of annuals using a 29-year dataset from a dry steppe site at the Inner Mongolia Grassland Ecosystem Research Station. Results showed that aboveground biomass and relative aboveground biomass of annuals increased with increasing precipitation. The coefficient of variation in aboveground biomass of annuals decreased significantly with increasing annual and growing-season precipitation. Species richness of annuals increased significantly with increasing annual precipitation and growing-season precipitation. Overall, this study highlights the importance of precipitation for aboveground biomass and species richness of annuals. PMID:25906187

  12. High tropical net diversification drives the New World latitudinal gradient in palm (Arecaceae) species richness

    DEFF Research Database (Denmark)

    Svenning, J.-C.; Borchsenius, Finn; Bjorholm, Stine Wendelboe

    2008-01-01

    /temperature and water availability. These patterns therefore reflect net diversification at both deep and shallow levels in the phylogeny. Richness also increased with range in elevation, but this was only reflected in the MS/G pattern and therefore reflects recent diversification. Main conclusions The geographical......Aim Species richness exhibits striking geographical variation, but the processes that drive this variation are unresolved. We investigated the relative importance of two hypothesized evolutionary causes for the variation in palm species richness across the New World: time for diversification...

  13. Do low-mercury terrestrial resources subsidize low-mercury growth of stream fish? Differences between species along a productivity gradient.

    Directory of Open Access Journals (Sweden)

    Darren M Ward

    Full Text Available Low productivity in aquatic ecosystems is associated with reduced individual growth of fish and increased concentrations of methylmercury (MeHg in fish and their prey. However, many stream-dwelling fish species can use terrestrially-derived food resources, potentially subsidizing growth at low-productivity sites, and, because terrestrial resources have lower MeHg concentrations than aquatic resources, preventing an increase in diet-borne MeHg accumulation. We used a large-scale field study to evaluate relationships among terrestrial subsidy use, growth, and MeHg concentrations in two stream-dwelling fish species across an in-stream productivity gradient. We sampled young-of-the-year brook trout (Salvelinus fontinalis and Atlantic salmon (Salmo salar, potential competitors with similar foraging habits, from 20 study sites in streams in New Hampshire and Massachusetts that encompassed a wide range of aquatic prey biomass. Stable isotope analysis showed that brook trout used more terrestrial resources than Atlantic salmon. Over their first growing season, Atlantic salmon tended to grow larger than brook trout at sites with high aquatic prey biomass, but brook grew two-fold larger than Atlantic salmon at sites with low aquatic prey biomass. The MeHg concentrations of brook trout and Atlantic salmon were similar at sites with high aquatic prey biomass and the MeHg concentrations of both species increased at sites with low prey biomass and high MeHg in aquatic prey. However, brook trout had three-fold lower MeHg concentrations than Atlantic salmon at low-productivity, high-MeHg sites. These results suggest that differential use of terrestrial resource subsidies reversed the growth asymmetry between potential competitors across a productivity gradient and, for one species, moderated the effect of low in-stream productivity on MeHg accumulation.

  14. The effect of peatland drainage and restoration on Odonata species richness and abundance.

    Science.gov (United States)

    Elo, Merja; Penttinen, Jouni; Kotiaho, Janne S

    2015-04-09

    Restoration aims at reversing the trend of habitat degradation, the major threat to biodiversity. In Finland, more than half of the original peatland area has been drained, and during recent years, restoration of some of the drained peatlands has been accomplished. Short-term effects of the restoration on peatland hydrology, chemistry and vegetation are promising but little is known about how other species groups apart from vascular plants and bryophytes respond to restoration efforts. Here, we studied how abundance and species richness of Odonata (dragonflies and damselflies) respond to restoration. We sampled larvae in three sites (restored, drained, pristine) on each of 12 different study areas. We sampled Odonata larvae before restoration (n = 12), during the first (n = 10) and the third (n = 7) year after restoration and used generalized linear mixed models to analyze the effect of restoration. Drained sites had lower abundance and species richness than pristine sites. During the third year after restoration both abundance and species richness had risen in restored sites. Our results show that Odonata suffer from drainage, but seem to benefit from peatland restoration and are able to colonize newly formed water pools already within three years after restoration.

  15. Combining projected changes in species richness and composition reveals climate change impacts on coastal Mediterranean fish assemblages

    DEFF Research Database (Denmark)

    Albouy, Camille; Guilhaumon, François; Bastos Araujo, Miguel

    2012-01-01

    future climatic niches of 288 coastal Mediterranean fish species based on a global warming scenario. We then aggregated geographically the species-level projections to analyse the projected changes in species richness and composition. Our results show that projected changes in assemblage composition....... nestedness), separately. We also present a mapping strategy to simultaneously visualize changes in species richness and assemblage composition. To illustrate our approach, we used the Mediterranean coastal fish fauna as a case study. Using Bioclimatic Envelope Models (BEMs) we first projected the potential......, the joint exploration of changes in species richness and composition coupled with the distinction between species replacement and nestedness bears important information for understanding the nature of climate change impacts on biodiversity. These methodological advances should help decision...

  16. The Importance of Landscape Elements for Bat Activity and Species Richness in Agricultural Areas.

    Directory of Open Access Journals (Sweden)

    Olga Heim

    Full Text Available Landscape heterogeneity is regarded as a key factor for maintaining biodiversity and ecosystem function in production landscapes. We investigated whether grassland sites at close vicinity to forested areas are more frequently used by bats. Considering that bats are important consumers of herbivorous insects, including agricultural pest, this is important for sustainable land management. Bat activity and species richness were assessed using repeated monitoring from May to September in 2010 with acoustic monitoring surveys on 50 grassland sites in the Biosphere Reserve Schorfheide-Chorin (North-East Germany. Using spatial analysis (GIS, we measured the closest distance of each grassland site to potentially connecting landscape elements (e.g., trees, linear vegetation, groves, running and standing water. In addition, we assessed the distance to and the percent land cover of forest remnants and urban areas in a 200 m buffer around the recording sites to address differences in the local landscape setting. Species richness and bat activity increased significantly with higher forest land cover in the 200 m buffer and at smaller distance to forested areas. Moreover, species richness increased in proximity to tree groves. Larger amount of forest land cover and smaller distance to forest also resulted in a higher activity of bats on grassland sites in the beginning of the year during May, June and July. Landscape elements near grassland sites also influenced species composition of bats and species richness of functional groups (open, edge and narrow space foragers. Our results highlight the importance of forested areas, and suggest that agricultural grasslands that are closer to forest remnants might be better buffered against outbreaks of agricultural pest insects due to higher species richness and higher bat activity. Furthermore, our data reveals that even for highly mobile species such as bats, a very dense network of connecting elements within the

  17. Species richness pattern along altitudinal gradient in Central European beech forests

    Czech Academy of Sciences Publication Activity Database

    Hrivnák, R.; Gömöry, D.; Slezák, M.; Ujházy, K.; Hédl, Radim; Jarčuška, B.; Ujházyová, M.

    2014-01-01

    Roč. 49, č. 3 (2014), s. 425-441 ISSN 1211-9520 Institutional support: RVO:67985939 Keywords : altitude * beech-dominated forest * species richness Subject RIV: EF - Botanics Impact factor: 1.778, year: 2014

  18. Plant DNA barcodes can accurately estimate species richness in poorly known floras.

    Directory of Open Access Journals (Sweden)

    Craig Costion

    Full Text Available BACKGROUND: Widespread uptake of DNA barcoding technology for vascular plants has been slow due to the relatively poor resolution of species discrimination (∼70% and low sequencing and amplification success of one of the two official barcoding loci, matK. Studies to date have mostly focused on finding a solution to these intrinsic limitations of the markers, rather than posing questions that can maximize the utility of DNA barcodes for plants with the current technology. METHODOLOGY/PRINCIPAL FINDINGS: Here we test the ability of plant DNA barcodes using the two official barcoding loci, rbcLa and matK, plus an alternative barcoding locus, trnH-psbA, to estimate the species diversity of trees in a tropical rainforest plot. Species discrimination accuracy was similar to findings from previous studies but species richness estimation accuracy proved higher, up to 89%. All combinations which included the trnH-psbA locus performed better at both species discrimination and richness estimation than matK, which showed little enhanced species discriminatory power when concatenated with rbcLa. The utility of the trnH-psbA locus is limited however, by the occurrence of intraspecific variation observed in some angiosperm families to occur as an inversion that obscures the monophyly of species. CONCLUSIONS/SIGNIFICANCE: We demonstrate for the first time, using a case study, the potential of plant DNA barcodes for the rapid estimation of species richness in taxonomically poorly known areas or cryptic populations revealing a powerful new tool for rapid biodiversity assessment. The combination of the rbcLa and trnH-psbA loci performed better for this purpose than any two-locus combination that included matK. We show that although DNA barcodes fail to discriminate all species of plants, new perspectives and methods on biodiversity value and quantification may overshadow some of these shortcomings by applying barcode data in new ways.

  19. XUV-exposed, non-hydrostatic hydrogen-rich upper atmospheres of terrestrial planets. Part I: atmospheric expansion and thermal escape.

    Science.gov (United States)

    Erkaev, Nikolai V; Lammer, Helmut; Odert, Petra; Kulikov, Yuri N; Kislyakova, Kristina G; Khodachenko, Maxim L; Güdel, Manuel; Hanslmeier, Arnold; Biernat, Helfried

    2013-11-01

    The recently discovered low-density "super-Earths" Kepler-11b, Kepler-11f, Kepler-11d, Kepler-11e, and planets such as GJ 1214b represent the most likely known planets that are surrounded by dense H/He envelopes or contain deep H₂O oceans also surrounded by dense hydrogen envelopes. Although these super-Earths are orbiting relatively close to their host stars, they have not lost their captured nebula-based hydrogen-rich or degassed volatile-rich steam protoatmospheres. Thus, it is interesting to estimate the maximum possible amount of atmospheric hydrogen loss from a terrestrial planet orbiting within the habitable zone of late main sequence host stars. For studying the thermosphere structure and escape, we apply a 1-D hydrodynamic upper atmosphere model that solves the equations of mass, momentum, and energy conservation for a planet with the mass and size of Earth and for a super-Earth with a size of 2 R(Earth) and a mass of 10 M(Earth). We calculate volume heating rates by the stellar soft X-ray and extreme ultraviolet radiation (XUV) and expansion of the upper atmosphere, its temperature, density, and velocity structure and related thermal escape rates during the planet's lifetime. Moreover, we investigate under which conditions both planets enter the blow-off escape regime and may therefore experience loss rates that are close to the energy-limited escape. Finally, we discuss the results in the context of atmospheric evolution and implications for habitability of terrestrial planets in general.

  20. Scale-dependence of the correlation between human population and the species richness of stream macro-invertebrates

    DEFF Research Database (Denmark)

    Pecher, C.; Fritz, Susanne; Marini, L.

    2010-01-01

    . This is surprising as EPT are bio-indicators of stream pollution and most local studies report higher species richness of these macro-invertebrates where human influences on water quality are lower. Using a newly collated taxonomic dataset, we studied whether the species richness of EPT is related to human...

  1. Correlation between the habitats productivity and species richness (amphibians and reptiles) in Portugal through remote sensed data

    Science.gov (United States)

    Teodoro, A. C.; Sillero, N.; Alves, S.; Duarte, L.

    2013-10-01

    Several biogeographic theories propose that the species richness depends on the structure and ecosystems diversity. The habitat productivity, a surrogate for these variables, can be evaluated through satellite imagery, namely using vegetation indexes (e.g. NDVI). We analyzed the correlation between species richness (from the Portuguese Atlas of Amphibians and Reptiles) and NDVI (from Landsat, MODIS, and Vegetation images). The species richness database contains more than 80000 records, collected from bibliographic sources (at 1 or 10 km of spatial resolution) and fieldwork sampling stations (recorded with GPS devices). Several study areas were chosen for Landsat images (three subsets), and all Portugal for MODIS and Vegetation images. The Landsat subareas had different climatic and habitat characteristics, located in the north, center and south of Portugal. Different species richness datasets were used depending on the image spatial resolution: data with metric resolution were used for Landsat, and with 1 km resolution, for MODIS and Vegetation images. The NDVI indexes and all the images were calculated/processed in an open source software (Quantum GIS). Several plug-ins were applied in order to automatize several procedures. We did not find any correlation between the species richness of amphibians and reptiles (not even after separating both groups by species of Atlantic and Mediterranean affinity) and the NDVI calculated with Landsat, MODIS and Vegetation images. Our results may fail to find a relationship because as the species richness is not correlated with only one variable (NDVI), and thus other environmental variables must be considered.

  2. Evaluating effects of habitat loss and land-use continuity on ant species richness in seminatural grassland remnants.

    Science.gov (United States)

    Dauber, Jens; Bengtsson, Jan; Lenoir, Lisette

    2006-08-01

    Seminatural grasslands in Europe are susceptible to habitat destruction and fragmentation that result in negative effects on biodiversity because of increased isolation and area effects on extinction rate. However even small habitatpatches of seminatural grasslands might be of value for conservation and restoration of species richness in a landscape with a long history of management, which has been argued to lead to high species richness. We tested whether ant communities have been negatively affected by habitat loss and increased isolation of seminatural grasslands during the twentieth century. We examined species richness and community composition in seminatural grasslands of different size in a mosaic landscape in Central Sweden. Grasslands managed continuously over centuries harbored species-rich and ecologically diverse ant communities. Grassland remnant size had no effect on ant species richness. Small grassland remnants did not harbor a nested subset of the ant species of larger habitats. Community composition of ants was mainly affected by habitat conditions. Our results suggest that the abandonment of traditional land use and the encroachment of trees, rather than the effects of fragmentation, are important for species composition in seminatural grasslands. Our results highlight the importance of considering land-use continuity and dispersal ability of thefocal organisms when examining the effects of habitat loss and fragmentation on biodiversity. Landscape history should be considered in conservation programs focusing on effects of land-use change.

  3. Estimating radionuclide transfer to wild species-data requirements and availability for terrestrial ecosystems

    International Nuclear Information System (INIS)

    Beresford, N A; Broadley, M R; Howard, B J; Barnett, C L; White, P J

    2004-01-01

    Assessment of the transfer of radionuclides to wild species is an important component in the estimation of predicted doses to biota. Reviews of available data for the many potential radionuclide-biota combinations which may be required for environmental assessments highlight many data gaps for terrestrial species. Here, we discuss different approaches which have been suggested to compensate for these data gaps. All of the reviewed approaches have merit; however, there is a requirement for transparency in methodology and data provenance which in some instances is currently missing. Furthermore, there is a need to validate the various methodologies to enable their use with confidence. The requirements of improving our ability to predict radionuclide transfer to wild species are discussed and recommendations made

  4. Family richness and biomass of understory invertebrates in early and late successional habitats of northern New Hampshire

    Science.gov (United States)

    Matthew K. Wilson; Winsor H. Lowe; Keith Nislow

    2014-01-01

    In the northeastern United States, many vertebrate species rely on early successional forest habitats (ESHs). ESHs may also support higher invertebrate diversity and abundance than late successional habitats (LSHs). We assessed the differences in family-level richness and biomass of understory terrestrial invertebrates during the summer season in paired ESH (3-7 years...

  5. Plant species richness regulates soil respiration through changes in productivity

    NARCIS (Netherlands)

    Dias, A.A.; Ruijven, van J.; Berendse, F.

    2010-01-01

    Soil respiration is an important pathway of the C cycle. However, it is still poorly understood how changes in plant community diversity can affect this ecosystem process. Here we used a long-term experiment consisting of a gradient of grassland plant species richness to test for effects of

  6. Plant species richness regulates soil respiration through changes in productivity.

    NARCIS (Netherlands)

    Tavares Correa Dias, A.; van Ruijven, J.; Berendse, F.

    2010-01-01

    Soil respiration is an important pathway of the C cycle. However, it is still poorly understood how changes in plant community diversity can affect this ecosystem process. Here we used a long-term experiment consisting of a gradient of grassland plant species richness to test for effects of

  7. [Altitudinal patterns of species richness and species range size of vascular plants in Xiaolong- shan Reserve of Qinling Mountain: a test of Rapoport' s rule].

    Science.gov (United States)

    Zheng, Zhi; Gong, Da-Jie; Sun, Cheng-Xiang; Li, Xiao-Jun; Li, Wan-Jiang

    2014-09-01

    Altitudinal patterns of species richness and species range size and their underlying mechanisms have long been a key topic in biogeography and biodiversity research. Rapoport's rule stated that the species richness gradually declined with the increasing altitude, while the species ranges became larger. Using altitude-distribution database from Xiaolongshan Reverse, this study explored the altitudinal patterns of vascular plant species richness and species range in Qinling Xiaolongshan Reserve, and examined the relationships between species richness and their distributional middle points in altitudinal bands for different fauna, taxonomic units and growth forms and tested the Rapoport's rule by using Stevens' method, Pagel's method, mid-point method and cross-species method. The results showed that the species richness of vascular plants except small-range species showed a unimodal pattern along the altitude in Qinling Xiaolongshan Reserve and the highest proportion of small-range species was found at the lower altitudinal bands and at the higher altitudinal bands. Due to different assemblages and examining methods, the relationships between species distributing range sizes and the altitudes were different. Increasing taxonomic units was easier to support Rapoport's rule, which was related to niche differences that the different taxonomic units occupied. The mean species range size of angiosperms showed a unimodal pattern along the altitude, while those of the gymnosperms and pteridophytes were unclearly regular. The mean species range size of the climbers was wider with the increasing altitude, while that of the shrubs which could adapt to different environmental situations was not sensitive to the change of altitude. Pagel's method was easier to support the Rapoport's rule, and then was Steven's method. On the contrary, due to the mid-domain effect, the results of the test by using the mid-point method showed that the mean species range size varied in a unimodal

  8. Potential effects of ongoing and proposed hydropower development on terrestrial biological diversity in the Indian Himalaya.

    Science.gov (United States)

    Pandit, Maharaj K; Grumbine, R Edward

    2012-12-01

    Indian Himalayan basins are earmarked for widespread dam building, but aggregate effects of these dams on terrestrial ecosystems are unknown. We mapped distribution of 292 dams (under construction and proposed) and projected effects of these dams on terrestrial ecosystems under different scenarios of land-cover loss. We analyzed land-cover data of the Himalayan valleys, where dams are located. We estimated dam density on fifth- through seventh-order rivers and compared these estimates with current global figures. We used a species-area relation model (SAR) to predict short- and long-term species extinctions driven by deforestation. We used scatter plots and correlation studies to analyze distribution patterns of species and dams and to reveal potential overlap between species-rich areas and dam sites. We investigated effects of disturbance on community structure of undisturbed forests. Nearly 90% of Indian Himalayan valleys would be affected by dam building and 27% of these dams would affect dense forests. Our model projected that 54,117 ha of forests would be submerged and 114,361 ha would be damaged by dam-related activities. A dam density of 0.3247/1000 km(2) would be nearly 62 times greater than current average global figures; the average of 1 dam for every 32 km of river channel would be 1.5 times higher than figures reported for U.S. rivers. Our results show that most dams would be located in species-rich areas of the Himalaya. The SAR model projected that by 2025, deforestation due to dam building would likely result in extinction of 22 angiosperm and 7 vertebrate taxa. Disturbance due to dam building would likely reduce tree species richness by 35%, tree density by 42%, and tree basal cover by 30% in dense forests. These results, combined with relatively weak national environmental impact assessment and implementation, point toward significant loss of species if all proposed dams in the Indian Himalaya are constructed. ©2012 Society for Conservation

  9. Terrestrial salamander abundance on reclaimed mountaintop removal mines

    Science.gov (United States)

    Wood, Petra Bohall; Williams, Jennifer M.

    2013-01-01

    Mountaintop removal mining, a large-scale disturbance affecting vegetation, soil structure, and topography, converts landscapes from mature forests to extensive grassland and shrubland habitats. We sampled salamanders using drift-fence arrays and coverboard transects on and near mountaintop removal mines in southern West Virginia, USA, during 2000–2002. We compared terrestrial salamander relative abundance and species richness of un-mined, intact forest with habitats on reclaimed mountaintop removal mines (reclaimed grassland, reclaimed shrubland, and fragmented forest). Salamanders within forests increased in relative abundance with increasing distance from reclaimed mine edge. Reclaimed grassland and shrubland habitats had lower relative abundance and species richness than forests. Characteristics of reclaimed habitats that likely contributed to lower salamander abundance included poor soils (dry, compacted, little organic matter, high rock content), reduced vertical structure of vegetation and little tree cover, and low litter and woody debris cover. Past research has shown that salamander populations reduced by clearcutting may rebound in 15–24 years. Time since disturbance was 7–28 years in reclaimed habitats on our study areas and salamander populations had not reached levels found in adjacent mature forests.

  10. Patterns of species richness in sandy beaches of South America ...

    African Journals Online (AJOL)

    The middle shore is primarily occupied by cirolanids and bivalves, and hippid crabs, bivalves and amphipods dominate the lower beach. Generally, species richness increases from upper to lower beach levels. Studies carried out on exposed sandy beaches of south-central Chile (ca. 40°S) show that different beach states ...

  11. Species richness, alpha and beta diversity of trees, shrubs and herbaceous plants in the woodlands of swat, pakistan

    International Nuclear Information System (INIS)

    Akhtar, N.; Bergmeier, E.

    2015-01-01

    The variation in species richness and diversity of trees, shrubs and herbs in the mountains of Miandam, Swat, North Pakistan, along an elevation gradient between 1600 m and 3400 m was explored. Field data were collected in 18 altitudinal intervals of 100 m each. Polynomial regression was used to find relations of the different growth forms with elevation. The Shannon index was used for calculating α-diversity and the Simpson index for β-diversity. Species richness and α-diversity of herbs were unrelated to elevation. Herbaceous species turnover was high, ranging between 0.46 and 0.89, with its maximum between 2700 and 3000 m. Hump-shaped relationship was observed for shrubs with maximum richness between 2000 and 2200 m; and α-diversity decreased monotonically. Turnover of shrub species was highest between 2000 and 2500 m. Tree species richness was highest at low elevations, and α-diversity was relatively low along the entire gradient. Tree species turnover was also high in the lower zone and again at 2600-2800 m. Species richness of all vascular plants was highest at 2200-2500 m, and α-diversity was highest in the lower part of the gradient. Beta diversity of all growth forms was quite high ranging between 0.53 and 0.87 along the entire gradient reflecting high species and structural turnover. (author)

  12. Invasive Alien Species of Terrestrial Vegetation of North-Eastern Uttar Pradesh

    Directory of Open Access Journals (Sweden)

    Sumit Srivastava

    2014-01-01

    Full Text Available The vegetational landscape of north-eastern Terai region at the foot hills of Central Himalayas is a mosaic of grassland, old-field, wasteland, and forest ecosystems. Like many other parts of the country, this region is also infested with alien intruders which not only interfere with the growth and production of food crops but also exercise adverse effects on the biodiversity of native species. The present study attempts to catalogue the invasive alien species of the terrestrial vegetation of north-eastern Uttar Pradesh especially with reference to their habit, taxonomic position, and nativity. A total of 1135 plant species within 580 genera under 119 families are so far known to occur in the region. Of these, only 149 species within 100 genera under 41 families have been found to be invasive aliens as evident from their center of origin, past history, nature of aggregation, and invasion observed under field conditions. About 80% of these invaders have been introduced from neotropics. Out of 173 invasive plants across India, this region shares 149 species, out of which 66% of species have come from Tropical America, 14% from African continent, and the rest from other countries. A better planning in the form of early identification and reporting of infestation and spread of noxious weeds is needed for their control.

  13. Likeability of Garden Birds: Importance of Species Knowledge & Richness in Connecting People to Nature.

    Science.gov (United States)

    Cox, Daniel T C; Gaston, Kevin J

    2015-01-01

    Interacting with nature is widely recognised as providing many health and well-being benefits. As people live increasingly urbanised lifestyles, the provision of food for garden birds may create a vital link for connecting people to nature and enabling them to access these benefits. However, it is not clear which factors determine the pleasure that people receive from watching birds at their feeders. These may be dependent on the species that are present, the abundance of individuals and the species richness of birds around the feeders. We quantitatively surveyed urban households from towns in southern England to determine the factors that influence the likeability of 14 common garden bird species, and to assess whether people prefer to see a greater abundance of individuals or increased species richness at their feeders. There was substantial variation in likeability across species, with songbirds being preferred over non-songbirds. Species likeability increased for people who fed birds regularly and who could name the species. We found a strong correlation between the number of species that a person could correctly identify and how connected to nature they felt when they watched garden birds. Species richness was preferred over a greater number of individuals of the same species. Although we do not show causation this study suggests that it is possible to increase the well-being benefits that people gain from watching birds at their feeders. This could be done first through a human to bird approach by encouraging regular interactions between people and their garden birds, such as through learning the species names and providing food. Second, it could be achieved through a bird to human approach by increasing garden songbird diversity because the pleasure that a person receives from watching an individual bird at a feeder is dependent not only on its species but also on the diversity of birds at the feeder.

  14. Age and area predict patterns of species richness in pumice rafts contingent on oceanic climatic zone encountered.

    Science.gov (United States)

    Velasquez, Eleanor; Bryan, Scott E; Ekins, Merrick; Cook, Alex G; Hurrey, Lucy; Firn, Jennifer

    2018-05-01

    The theory of island biogeography predicts that area and age explain species richness patterns (or alpha diversity) in insular habitats. Using a unique natural phenomenon, pumice rafting, we measured the influence of area, age, and oceanic climate on patterns of species richness. Pumice rafts are formed simultaneously when submarine volcanoes erupt, the pumice clasts breakup irregularly, forming irregularly shaped pumice stones which while floating through the ocean are colonized by marine biota. We analyze two eruption events and more than 5,000 pumice clasts collected from 29 sites and three climatic zones. Overall, the older and larger pumice clasts held more species. Pumice clasts arriving in tropical and subtropical climates showed this same trend, where in temperate locations species richness (alpha diversity) increased with area but decreased with age. Beta diversity analysis of the communities forming on pumice clasts that arrived in different climatic zones showed that tropical and subtropical clasts transported similar communities, while species composition on temperate clasts differed significantly from both tropical and subtropical arrivals. Using these thousands of insular habitats, we find strong evidence that area and age but also climatic conditions predict the fundamental dynamics of species richness colonizing pumice clasts.

  15. Long-term nitrogen addition leads to loss of species richness due to litter accumulation and soil acidification in a temperate steppe.

    Science.gov (United States)

    Fang, Ying; Xun, Fen; Bai, Wenming; Zhang, Wenhao; Li, Linghao

    2012-01-01

    Although community structure and species richness are known to respond to nitrogen fertilization dramatically, little is known about the mechanisms underlying specific species replacement and richness loss. In an experiment in semiarid temperate steppe of China, manipulative N addition with five treatments was conducted to evaluate the effect of N addition on the community structure and species richness. Species richness and biomass of community in each plot were investigated in a randomly selected quadrat. Root element, available and total phosphorus (AP, TP) in rhizospheric soil, and soil moisture, pH, AP, TP and inorganic N in the soil were measured. The relationship between species richness and the measured factors was analyzed using bivariate correlations and stepwise multiple linear regressions. The two dominant species, a shrub Artemisia frigida and a grass Stipa krylovii, responded differently to N addition such that the former was gradually replaced by the latter. S. krylovii and A. frigida had highly-branched fibrous and un-branched tap root systems, respectively. S. krylovii had higher height than A. frigida in both control and N added plots. These differences may contribute to the observed species replacement. In addition, the analysis on root element and AP contents in rhizospheric soil suggests that different calcium acquisition strategies, and phosphorus and sodium responses of the two species may account for the replacement. Species richness was significantly reduced along the five N addition levels. Our results revealed a significant relationship between species richness and soil pH, litter amount, soil moisture, AP concentration and inorganic N concentration. Our results indicate that litter accumulation and soil acidification accounted for 52.3% and 43.3% of the variation in species richness, respectively. These findings would advance our knowledge on the changes in species richness in semiarid temperate steppe of northern China under N

  16. The importance of plot size and the number of sampling seasons on capturing macrofungal species richness.

    Science.gov (United States)

    Li, Huili; Ostermann, Anne; Karunarathna, Samantha C; Xu, Jianchu; Hyde, Kevin D; Mortimer, Peter E

    2018-07-01

    The species-area relationship is an important factor in the study of species diversity, conservation biology, and landscape ecology. A deeper understanding of this relationship is necessary, in order to provide recommendations on how to improve the quality of data collection on macrofungal diversity in different land use systems in future studies, a systematic assessment of methodological parameters, in particular optimal plot sizes. The species-area relationship of macrofungi in tropical and temperate climatic zones and four different land use systems were investigated by determining the macrofungal species richness in plot sizes ranging from 100 m 2 to 10 000 m 2 over two sampling seasons. We found that the effect of plot size on recorded species richness significantly differed between land use systems with the exception of monoculture systems. For both climate zones, land use system needs to be considered when determining optimal plot size. Using an optimal plot size was more important than temporal replication (over two sampling seasons) in accurately recording species richness. Copyright © 2018 British Mycological Society. Published by Elsevier Ltd. All rights reserved.

  17. The challenge of accurately documenting bee species richness in agroecosystems: bee diversity in eastern apple orchards

    Science.gov (United States)

    Russo, Laura; Park, Mia; Gibbs, Jason; Danforth, Bryan

    2015-01-01

    Bees are important pollinators of agricultural crops, and bee diversity has been shown to be closely associated with pollination, a valuable ecosystem service. Higher functional diversity and species richness of bees have been shown to lead to higher crop yield. Bees simultaneously represent a mega-diverse taxon that is extremely challenging to sample thoroughly and an important group to understand because of pollination services. We sampled bees visiting apple blossoms in 28 orchards over 6 years. We used species rarefaction analyses to test for the completeness of sampling and the relationship between species richness and sampling effort, orchard size, and percent agriculture in the surrounding landscape. We performed more than 190 h of sampling, collecting 11,219 specimens representing 104 species. Despite the sampling intensity, we captured wild bees did not appear to be a factor, as we found no correlation between honeybee and wild bee abundance. Our study shows that the pollinator fauna of agroecosystems can be diverse and challenging to thoroughly sample. We demonstrate that there is high temporal variation in community composition and that sites vary widely in the sampling effort required to fully describe their diversity. In order to maximize pollination services provided by wild bee species, we must first accurately estimate species richness. For researchers interested in providing this estimate, we recommend multiyear studies and rarefaction analyses to quantify the gap between observed and expected species richness. PMID:26380684

  18. Effects of Management on Lichen Species Richness, Ecological Traits and Community Structure in the Rodnei Mountains National Park (Romania).

    Science.gov (United States)

    Ardelean, Ioana Violeta; Keller, Christine; Scheidegger, Christoph

    2015-01-01

    Lichens are valuable bio-indicators for evaluating the consequences of human activities that are increasingly changing the earth's ecosystems. Since a major objective of national parks is the preservation of biodiversity, our aim is to analyse how natural resource management, the availability of lichen substrates and environmental parameters influence lichen diversity in Rodnei Mountains National Park situated in the Eastern Carpathians. Three main types of managed vegetation were investigated: the transhumance systems in alpine meadows, timber exploitation in mixed and pure spruce forests, and the corresponding conserved sites. The data were sampled following a replicated design. For the analysis, we considered not only all lichen species, but also species groups from different substrates such as soil, trees and deadwood. The lichen diversity was described according to species richness, red-list status and substrate-specialist species richness. The variation in species composition was related to the environmental variables. Habitat management was found to negatively influence species richness and alter the lichen community composition, particularly for threatened and substrate-specialist species. It reduced the mean level of threatened species richness by 59%, when all lichen species were considered, and by 81%, when only epiphytic lichens were considered. Management-induced disturbance significantly decreased lichen species richness in forest landscapes with long stand continuity. The diversity patterns of the lichens indicate a loss of species richness and change in species composition in areas where natural resources are still exploited inside the borders of the national park. It is thus imperative for protected areas, in particular old-growth forests and alpine meadows, to receive more protection than they have received in the past to ensure populations of the characteristic species remain viable in the future.

  19. Effects of Management on Lichen Species Richness, Ecological Traits and Community Structure in the Rodnei Mountains National Park (Romania.

    Directory of Open Access Journals (Sweden)

    Ioana Violeta Ardelean

    Full Text Available Lichens are valuable bio-indicators for evaluating the consequences of human activities that are increasingly changing the earth's ecosystems. Since a major objective of national parks is the preservation of biodiversity, our aim is to analyse how natural resource management, the availability of lichen substrates and environmental parameters influence lichen diversity in Rodnei Mountains National Park situated in the Eastern Carpathians. Three main types of managed vegetation were investigated: the transhumance systems in alpine meadows, timber exploitation in mixed and pure spruce forests, and the corresponding conserved sites. The data were sampled following a replicated design. For the analysis, we considered not only all lichen species, but also species groups from different substrates such as soil, trees and deadwood. The lichen diversity was described according to species richness, red-list status and substrate-specialist species richness. The variation in species composition was related to the environmental variables. Habitat management was found to negatively influence species richness and alter the lichen community composition, particularly for threatened and substrate-specialist species. It reduced the mean level of threatened species richness by 59%, when all lichen species were considered, and by 81%, when only epiphytic lichens were considered. Management-induced disturbance significantly decreased lichen species richness in forest landscapes with long stand continuity. The diversity patterns of the lichens indicate a loss of species richness and change in species composition in areas where natural resources are still exploited inside the borders of the national park. It is thus imperative for protected areas, in particular old-growth forests and alpine meadows, to receive more protection than they have received in the past to ensure populations of the characteristic species remain viable in the future.

  20. Consistency of effects of tropical-forest disturbance on species composition and richness relative to use of indicator taxa.

    Science.gov (United States)

    Stork, N E; Srivastava, D S; Eggleton, P; Hodda, M; Lawson, G; Leakey, R R B; Watt, A D

    2017-08-01

    Lawton et al. (1998) found, in a highly cited study, that the species richness of 8 taxa each responds differently to anthropogenic disturbance in Cameroon forests. Recent developments in conservation science suggest that net number of species is an insensitive measure of change and that understanding which species are affected by disturbance is more important. It is also recognized that all disturbance types are not equal in their effect on species and that grouping species according to function rather than taxonomy is more informative of responses of biodiversity to change. In a reanalysis of most of the original Cameroon data set (canopy and ground ants, termites, canopy beetles, nematodes, and butterflies), we focused on changes in species and functional composition rather than richness and used a more inclusive measure of forest disturbance based on 4 component drivers of change: years since disturbance, tree cover, soil compaction, and degree of tree removal. Effects of disturbance on compositional change were largely concordant between taxa. Contrary to Lawton et al.'s findings, species richness for most groups did not decline with disturbance level, providing support for the view that trends in species richness at local scales do not reflect the resilience of ecosystems to disturbance. Disturbance affected species composition more strongly than species richness for butterflies, canopy beetles, and litter ants. For these groups, disturbance caused species replacements rather than just species loss. Only termites showed effects of disturbance on species richness but not composition, indicating species loss without replacement. Although disturbance generally caused changes in composition, the strength of this relationship depended on the disturbance driver. Butterflies, litter ants, and nematodes were correlated with amount of tree cover, canopy beetles were most strongly correlated with time since disturbance, and termites were most strongly correlated with

  1. Evolutionary history determines how plant productivity responds to phylogenetic diversity and species richness

    Directory of Open Access Journals (Sweden)

    Mark A. Genung

    2014-03-01

    Full Text Available The relationship between biodiversity and ecosystem function has received a great deal of attention in ecological research and recent results, from re-analyses, suggest that ecosystem function improves with increases in phylogenetic diversity. However, many of these results have been generalized across a range of different species and clades, and plants with different evolutionary histories could display different relationships between biodiversity and ecosystem function. To experimentally test this hypothesis, we manipulated species richness and phylogenetic diversity using 26 species from two subgenera of the genus Eucalyptus (subgenus Eucalyptus and subgenus Symphyomyrtus. We found that plant biomass (a measurement of ecosystem function sometimes, but not always, responded to increases in species richness and phylogenetic diversity. Specifically, Symphyomyrtus plants showed a positive response while no comparable effect was observed for Eucalyptus plants, showing that responses to biodiversity can vary across different phylogenetic groups. Our results show that the impacts of evolutionary history may complicate the relationship between the diversity of plant communities and plant biomass.

  2. Using Google Earth Surface Metrics to Predict Plant Species Richness in a Complex Landscape

    Directory of Open Access Journals (Sweden)

    Sebastián Block

    2016-10-01

    Full Text Available Google Earth provides a freely available, global mosaic of high-resolution imagery from different sensors that has become popular in environmental and ecological studies. However, such imagery lacks the near-infrared band often used in studying vegetation, thus its potential for estimating vegetation properties remains unclear. In this study, we assess the potential of Google Earth imagery to describe and predict vegetation attributes. Further, we compare it to the potential of SPOT imagery, which has additional spectral information. We measured basal area, vegetation height, crown cover, density of individuals, and species richness in 60 plots in the oak forests of a complex volcanic landscape in central Mexico. We modelled each vegetation attribute as a function of surface metrics derived from Google Earth and SPOT images, and selected the best-supported linear models from each source. Total species richness was the best-described and predicted variable: the best Google Earth-based model explained nearly as much variation in species richness as its SPOT counterpart (R2 = 0.44 and 0.51, respectively. However, Google Earth metrics emerged as poor predictors of all remaining vegetation attributes, whilst SPOT metrics showed potential for predicting vegetation height. We conclude that Google Earth imagery can be used to estimate species richness in complex landscapes. As it is freely available, Google Earth can broaden the use of remote sensing by researchers and managers in low-income tropical countries where most biodiversity hotspots are found.

  3. Inferring species richness and turnover by statistical multiresolution texture analysis of satellite imagery.

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    Matteo Convertino

    Full Text Available BACKGROUND: The quantification of species-richness and species-turnover is essential to effective monitoring of ecosystems. Wetland ecosystems are particularly in need of such monitoring due to their sensitivity to rainfall, water management and other external factors that affect hydrology, soil, and species patterns. A key challenge for environmental scientists is determining the linkage between natural and human stressors, and the effect of that linkage at the species level in space and time. We propose pixel intensity based Shannon entropy for estimating species-richness, and introduce a method based on statistical wavelet multiresolution texture analysis to quantitatively assess interseasonal and interannual species turnover. METHODOLOGY/PRINCIPAL FINDINGS: We model satellite images of regions of interest as textures. We define a texture in an image as a spatial domain where the variations in pixel intensity across the image are both stochastic and multiscale. To compare two textures quantitatively, we first obtain a multiresolution wavelet decomposition of each. Either an appropriate probability density function (pdf model for the coefficients at each subband is selected, and its parameters estimated, or, a non-parametric approach using histograms is adopted. We choose the former, where the wavelet coefficients of the multiresolution decomposition at each subband are modeled as samples from the generalized Gaussian pdf. We then obtain the joint pdf for the coefficients for all subbands, assuming independence across subbands; an approximation that simplifies the computational burden significantly without sacrificing the ability to statistically distinguish textures. We measure the difference between two textures' representative pdf's via the Kullback-Leibler divergence (KL. Species turnover, or [Formula: see text] diversity, is estimated using both this KL divergence and the difference in Shannon entropy. Additionally, we predict species

  4. Small-scale area effect on species richness and nesting occupancy of cavity-nesting bees and wasps

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    Rafael D. Loyola

    2011-03-01

    Full Text Available Small-scale area effect on species richness and nesting occupancy of cavity-nesting bees and wasps. The research was conducted in an urban forest remnant in southeast Brazil. We tested the predictions of the following hypotheses: (1 larger areas present higher species richness of bees and wasps, (2 solitary bees and wasps occupy more nests in larger areas, (3 rare species occupy more nests in smaller areas. We sampled Aculeate bees and wasps using trap nests from February to November 2004. We placed trap nests in sampling units (SU with different size (25, 100 and 400 m² located in 6 ha of secondary mesophytic forest. One hundred and thirty-seven trap nests were occupied by seven species of bees and four species of wasps. We found an increase in wasp, but not bee species richness following increase in SU size. Hymenoptera richness (i.e. bees plus wasps was also greater in larger SU. Both the number and density of occupied nests increased with SU size. The wasp Trypoxylon lactitarse responded significantly to area size, larger SU having more occupied nests. The same pattern was exhibited by the wasp Auplopus militaris, the Megachile bee species, and the bee Anthodioctes megachiloides. Only Trypoxylon sp. was not affected by SU size. Our results show that cavity-nesting bee and wasps respond differently to the area effects. Such findings must be complemented by information on the frequency and dynamics of area colonization and nest occupancy by species of solitary Hymenoptera.

  5. Relations of Environmental Factors with Mussel-Species Richness in the Neversink River, New York

    Science.gov (United States)

    Baldigo, Barry P.; Ernst, Anne G.; Schuler, George E.; Apse, Colin D.

    2007-01-01

    the Neversink Reservoir that mimic the river?s original flow patterns have recently been proposed by TNC and could benefit the established mussel populations and aquatic communities. The ability to protect mussel populations and the potential to increase mussel richness in the Neversink River is unknown, however, because the environmental factors that affect the seven mussel species are poorly defined, and the distribution of mussel beds is patchy and thus difficult to quantify. In 1997, the U.S. Geological Survey, in cooperation with TNC, began a 6-year study along the Neversink River and its tributaries to (1) document the current distribution of each mussel species, (2) assess environmental factors in relation to mussel-species richness and distribution, and (3) identify the factors that most strongly affect mussel populations and develop an equation that relates environmental factors to mussel-species richness. This report (a) summarizes the methods used to quantify or qualify environmental factors and mussel-species distribution and abundance, (b) presents a list of environmental factors that were correlated with mussel-species richness, and (c) offers an empirical model to predict richness of mussel species in benthic communities throughout the basin.

  6. The relative importance of pollinator abundance and species richness for the temporal variance of pollination services.

    Science.gov (United States)

    Genung, Mark A; Fox, Jeremy; Williams, Neal M; Kremen, Claire; Ascher, John; Gibbs, Jason; Winfree, Rachael

    2017-07-01

    The relationship between biodiversity and the stability of ecosystem function is a fundamental question in community ecology, and hundreds of experiments have shown a positive relationship between species richness and the stability of ecosystem function. However, these experiments have rarely accounted for common ecological patterns, most notably skewed species abundance distributions and non-random extinction risks, making it difficult to know whether experimental results can be scaled up to larger, less manipulated systems. In contrast with the prolific body of experimental research, few studies have examined how species richness affects the stability of ecosystem services at more realistic, landscape scales. The paucity of these studies is due in part to a lack of analytical methods that are suitable for the correlative structure of ecological data. A recently developed method, based on the Price equation from evolutionary biology, helps resolve this knowledge gap by partitioning the effect of biodiversity into three components: richness, composition, and abundance. Here, we build on previous work and present the first derivation of the Price equation suitable for analyzing temporal variance of ecosystem services. We applied our new derivation to understand the temporal variance of crop pollination services in two study systems (watermelon and blueberry) in the mid-Atlantic United States. In both systems, but especially in the watermelon system, the stronger driver of temporal variance of ecosystem services was fluctuations in the abundance of common bee species, which were present at nearly all sites regardless of species richness. In contrast, temporal variance of ecosystem services was less affected by differences in species richness, because lost and gained species were rare. Thus, the findings from our more realistic landscapes differ qualitatively from the findings of biodiversity-stability experiments. © 2017 by the Ecological Society of America.

  7. Species diversity and richness of wild birds in Dagona-Waterfowl ...

    African Journals Online (AJOL)

    The study of bird species diversity and richness in Dagona-Waterfowl Sanctuary was carried out during the midst of both early wet and late dry seasons, to provide comprehensive data on wild birds. Dagona Sanctuary is located within the Bade-Nguru Wetland sector. It is one of the important bird areas marked for the ...

  8. Species richness and composition assessment of spiders in a Mediterranean scrubland

    DEFF Research Database (Denmark)

    Bondoso Cardoso, Pedro Miguel; Henriques, Sérgio S.; Gaspar, Clara

    2009-01-01

    Intensive fieldwork has been undertaken in Portugal in order to develop a standardized and optimized sampling protocol for Mediterranean spiders. The present study had the objectives of testing the use of semi-quantitative sampling for obtaining an exhaustive species richness assessment of spiders...

  9. Patterns of species richness and diversity of insects associated with cucurbit fruits in the southern part of Cameroon.

    Science.gov (United States)

    Mokam, Didi Gaëlle; Djiéto-Lordon, Champlain; Bilong Bilong, Charles-Félix

    2014-01-01

    Patterns of species diversity and community structure of insects associated with fruits of domesticated cucurbits were investigated from January 2009 to 2011 in three localities from two agroecological zones in the southern part of Cameroon. Rarefaction curves combined with nonparametric estimators of species richness were used to extrapolate species richness beyond our own data. Sampling efforts of over 92% were reached in each of the three study localities. Data collected revealed a total of 66 insect morphospecies belonging to 37 families and five orders, identified from a set of 57,510 insects. The orders Diptera (especially Tephritidae and Lonchaeidae) and Hymenoptera (mainly Braconidae and Eulophidae) were the most important, in terms of both abundance and species richness on the one hand, and effects on agronomic performance on the other. Values for both the species diversity (Shannon and Simpson) and the species richness indices (Margalef and Berger-Parker) calculated showed that the insect communities were species-rich but dominated, all to a similar extent, by five main species (including four fruit fly species and one parasitoid). Species abundance distributions in these communities ranged from the Zipf-Mandelbrot to Mandelbrot models. The communities are structured as tritrophic networks, including cucurbit fruits, fruit-feeding species (fruit flies) and carnivorous species (parasitoids). Within the guild of the parasitoids, about 30% of species, despite their low abundance, may potentially be of use in biological control of important pests. Our field data contribute in important ways to basic knowledge of biodiversity patterns in agrosystems and constitute baseline data for the planned implementation of biological control in Integrated Pest Management. © The Author 2014. Published by Oxford University Press on behalf of the Entomological Society of America.

  10. Staged invasions across disparate grasslands: effects of seed provenance, consumers and disturbance on productivity and species richness.

    Science.gov (United States)

    Maron, John L; Auge, Harald; Pearson, Dean E; Korell, Lotte; Hensen, Isabell; Suding, Katharine N; Stein, Claudia

    2014-04-01

    Exotic plant invasions are thought to alter productivity and species richness, yet these patterns are typically correlative. Few studies have experimentally invaded sites and asked how addition of novel species influences ecosystem function and community structure and examined the role of competitors and/or consumers in mediating these patterns. We invaded disturbed and undisturbed subplots in and out of rodent exclosures with seeds of native or exotic species in grasslands in Montana, California and Germany. Seed addition enhanced aboveground biomass and species richness compared with no-seeds-added controls, with exotics having disproportionate effects on productivity compared with natives. Disturbance enhanced the effects of seed addition on productivity and species richness, whereas rodents reduced productivity, but only in Germany and California. Our results demonstrate that experimental introduction of novel species can alter ecosystem function and community structure, but that local filters such as competition and herbivory influence the magnitude of these impacts. © 2014 John Wiley & Sons Ltd/CNRS.

  11. Description of three new species of Labena Cresson from Mexico (Hymenoptera, Ichneumonidae, Labeninae), with notes on tropical species richness.

    Science.gov (United States)

    González-Moreno, Alejandra; Bordera, Santiago; Sääksjärvi, Ilari Eerikki

    2015-04-22

    Three new species of Labena Cresson (Ichneumonidae, Labeninae); L. littoralis sp. nov., L. tekalina sp. nov. and L. madoricola sp. nov. are described and illustrated. Material was collected with Malaise traps in 2008 and 2009 in the Biosphere Reserve Ria Lagartos (Mexico). Diagnostic characters to distinguish them from all other New World species of the genus are provided. In addition, the tropical species richness of the genus is shortly discussed.

  12. Biodiversity of Terrestrial Vegetation during Past Warm Periods

    Science.gov (United States)

    Davies-Barnard, T.; Valdes, P. J.; Ridgwell, A.

    2016-12-01

    Previous modelling studies of vegetation have generally used a small number of plant functional types to understand how the terrestrial biosphere responds to climate changes. Whilst being useful for understanding first order climate feedbacks, this climate-envelope approach makes a lot of assumptions about past vegetation being very similar to modern. A trait-based method has the advantage for paleo modelling in that there are substantially less assumptions made. In a novel use of the trait-based dynamic vegetation model JeDi, forced with output from climate model HadCM3, we explore past biodiversity and vegetation carbon changes. We use JeDi to model an optimal 2000 combinations of fifteen different traits to enable assessment of the overall level of biodiversity as well as individual growth strategies. We assess the vegetation shifts and biodiversity changes in past greenhouse periods to better understand the impact on the terrestrial biosphere. This work provides original insights into the response of vegetation and terrestrial carbon to climate and hydrological changes in high carbon dioxide climates over time, including during the Late Permian and Cretaceous. We evaluate how the location of biodiversity hotspots and species richness in past greenhouse climates is different to the present day.

  13. Disruption of the terrestrial plant ecosystem at the Cretaceous-Tertiary boundary, western interior

    Science.gov (United States)

    Tschudy, R.H.; Pillmore, C.L.; Orth, C.J.; Gilmore, J.S.; Knight, J.D.

    1984-01-01

    The palynologically defined Cretaceous-Tertiary boundary in the western interior of North America occurs at the top of an iridium-rich clay layer. The boundary is characterized by the abrupt disappearance of certain pollen species, immediately followed by a pronounced, geologically brief change in the ratio of fern spores to angiosperm pollen. The occurrence of these changes at two widely separated sites implies continentwide disruption of the terrestrial ecosystem, probably caused by a major catastrophic event at the end of the period.

  14. Spatial and temporal variability across life's hierarchies in the terrestrial Antarctic.

    Science.gov (United States)

    Chown, Steven L; Convey, Peter

    2007-12-29

    Antarctica and its surrounding islands lie at one extreme of global variation in diversity. Typically, these regions are characterized as being species poor and having simple food webs. Here, we show that terrestrial systems in the region are nonetheless characterized by substantial spatial and temporal variations at virtually all of the levels of the genealogical and ecological hierarchies which have been thoroughly investigated. Spatial variation at the individual and population levels has been documented in a variety of genetic studies, and in mosses it appears that UV-B radiation might be responsible for within-clump mutagenesis. At the species level, modern molecular methods have revealed considerable endemism of the Antarctic biota, questioning ideas that small organisms are likely to be ubiquitous and the taxa to which they belong species poor. At the biogeographic level, much of the relatively small ice-free area of Antarctica remains unsurveyed making analyses difficult. Nonetheless, it is clear that a major biogeographic discontinuity separates the Antarctic Peninsula and continental Antarctica, here named the 'Gressitt Line'. Across the Southern Ocean islands, patterns are clearer, and energy availability is an important correlate of indigenous and exotic species richness, while human visitor numbers explain much of the variation in the latter too. Temporal variation at the individual level has much to do with phenotypic plasticity, and considerable life-history and physiological plasticity seems to be a characteristic of Antarctic terrestrial species. Environmental unpredictability is an important driver of this trait and has significantly influenced life histories across the region and probably throughout much of the temperate Southern Hemisphere. Rapid climate change-related alterations in the range and abundance of several Antarctic and sub-Antarctic populations have taken place over the past several decades. In many sub-Antarctic locations, these

  15. Integrative modelling reveals mechanisms linking productivity and plant species richness.

    Science.gov (United States)

    Grace, James B; Anderson, T Michael; Seabloom, Eric W; Borer, Elizabeth T; Adler, Peter B; Harpole, W Stanley; Hautier, Yann; Hillebrand, Helmut; Lind, Eric M; Pärtel, Meelis; Bakker, Jonathan D; Buckley, Yvonne M; Crawley, Michael J; Damschen, Ellen I; Davies, Kendi F; Fay, Philip A; Firn, Jennifer; Gruner, Daniel S; Hector, Andy; Knops, Johannes M H; MacDougall, Andrew S; Melbourne, Brett A; Morgan, John W; Orrock, John L; Prober, Suzanne M; Smith, Melinda D

    2016-01-21

    How ecosystem productivity and species richness are interrelated is one of the most debated subjects in the history of ecology. Decades of intensive study have yet to discern the actual mechanisms behind observed global patterns. Here, by integrating the predictions from multiple theories into a single model and using data from 1,126 grassland plots spanning five continents, we detect the clear signals of numerous underlying mechanisms linking productivity and richness. We find that an integrative model has substantially higher explanatory power than traditional bivariate analyses. In addition, the specific results unveil several surprising findings that conflict with classical models. These include the isolation of a strong and consistent enhancement of productivity by richness, an effect in striking contrast with superficial data patterns. Also revealed is a consistent importance of competition across the full range of productivity values, in direct conflict with some (but not all) proposed models. The promotion of local richness by macroecological gradients in climatic favourability, generally seen as a competing hypothesis, is also found to be important in our analysis. The results demonstrate that an integrative modelling approach leads to a major advance in our ability to discern the underlying processes operating in ecological systems.

  16. Changes of Species Richness in Heathland Communities over 15 Years following Disturbances

    Directory of Open Access Journals (Sweden)

    L. Calvo

    2012-01-01

    Full Text Available The aim of this study was to define the species richness patterns over a period of 15 years during the vegetation recovery process after disturbances (burning, cutting and ploughing in heathlands. Three communities were selected: two dominated by Erica australis and one dominated by Calluna vulgaris. The alpha and gamma diversity patterns were site specific and influenced by the ecological traits of dominant shrub species. The shrubland dominated by Erica australis, typical resprouters with a fast regeneration, showed the highest values of alpha and gamma diversity during the first 7 years of regeneration. The heathland dominated by Calluna vulgaris, an obligate seeder, had a contrasting pattern of alpha and gamma diversity, as the highest values appeared from year 7 until year 14. Thus, the speed of regeneration of the dominant shrub species could be the main factor affecting structural parameters in these communities. Species richness patterns did not vary in relation to the different types of perturbation. Cutting and burning would be the most suitable forestry management strategies to conserve Erica australis heathlands, but burning is more appropriate in Calluna vulgaris ones because cutting modified this community.

  17. Solution of the spatial neutral model yields new bounds on the Amazonian species richness

    Science.gov (United States)

    Shem-Tov, Yahav; Danino, Matan; Shnerb, Nadav M.

    2017-02-01

    Neutral models, in which individual agents with equal fitness undergo a birth-death-mutation process, are very popular in population genetics and community ecology. Usually these models are applied to populations and communities with spatial structure, but the analytic results presented so far are limited to well-mixed or mainland-island scenarios. Here we combine analytic results and numerics to obtain an approximate solution for the species abundance distribution and the species richness for the neutral model on continuous landscape. We show how the regional diversity increases when the recruitment length decreases and the spatial segregation of species grows. Our results are supported by extensive numerical simulations and allow one to probe the numerically inaccessible regime of large-scale systems with extremely small mutation/speciation rates. Model predictions are compared with the findings of recent large-scale surveys of tropical trees across the Amazon basin, yielding new bounds for the species richness (between 13100 and 15000) and the number of singleton species (between 455 and 690).

  18. Changes in plant species richness induce functional shifts in soil nematode communities in experimental grassland.

    Directory of Open Access Journals (Sweden)

    Nico Eisenhauer

    Full Text Available Changes in plant diversity may induce distinct changes in soil food web structure and accompanying soil feedbacks to plants. However, knowledge of the long-term consequences of plant community simplification for soil animal food webs and functioning is scarce. Nematodes, the most abundant and diverse soil Metazoa, represent the complexity of soil food webs as they comprise all major trophic groups and allow calculation of a number of functional indices.We studied the functional composition of nematode communities three and five years after establishment of a grassland plant diversity experiment (Jena Experiment. In response to plant community simplification common nematode species disappeared and pronounced functional shifts in community structure occurred. The relevance of the fungal energy channel was higher in spring 2007 than in autumn 2005, particularly in species-rich plant assemblages. This resulted in a significant positive relationship between plant species richness and the ratio of fungal-to-bacterial feeders. Moreover, the density of predators increased significantly with plant diversity after five years, pointing to increased soil food web complexity in species-rich plant assemblages. Remarkably, in complex plant communities the nematode community shifted in favour of microbivores and predators, thereby reducing the relative abundance of plant feeders after five years.The results suggest that species-poor plant assemblages may suffer from nematode communities detrimental to plants, whereas species-rich plant assemblages support a higher proportion of microbivorous nematodes stimulating nutrient cycling and hence plant performance; i.e. effects of nematodes on plants may switch from negative to positive. Overall, food web complexity is likely to decrease in response to plant community simplification and results of this study suggest that this results mainly from the loss of common species which likely alter plant-nematode interactions.

  19. Short-chain chlorinated paraffins in terrestrial bird species inhabiting an e-waste recycling site in South China.

    Science.gov (United States)

    Luo, Xiao-Jun; Sun, Yu-Xin; Wu, Jiang-Ping; Chen, She-Jun; Mai, Bi-Xian

    2015-03-01

    Short-chain chlorinated paraffins (SCCPs) are under review by the Stockholm Convention on Persistent Organic Pollutants. Currently, limited data are available about SCCPs in terrestrial organisms. In the present study, SCCP concentration in the muscles of seven terrestrial bird species (n = 38) inhabiting an e-waste recycling area in South China was determined. This concentration varied from 620 to 17,000 ng/g lipid. Resident birds accumulated significantly higher SCCP concentrations than migratory birds (p < 0.01). Trophic magnification was observed for migratory bird species but not for resident, which was attributed to high heterogeneity of SCCP in e-waste area. Two different homologue group patterns were observed in avian samples. The first pattern was found in five bird species dominated by C10 and C11 congeners, while the second was found in the remains, which show rather equal abundance of homologue groups. This may be caused by two sources of SCCPs (local and e-waste) in the study area. Copyright © 2014 Elsevier Ltd. All rights reserved.

  20. Higher taxa as surrogates of species richness of spiders in insect-resistant transgenic rice

    Institute of Scientific and Technical Information of China (English)

    Sheng Lin; Min-Sheng You; Liette Vasseur; Guang Yang; Feng-Jing Liu; Feng Guo

    2012-01-01

    Biodiversity assessments can often be time- and resource-consuming.Several alternative approaches have been proposed to reduce sampling efforts,including indicator taxa and surrogates.In this study,we examine the reliability of higher taxon surrogates to predict species richness in two experimental rice fields of Fujian Province,southeastern China during 2005 and 2009.Spider samples in transgenic and nontransgenic plots were collected using a suction sampler.Both the genus and family surrogates had significant and positive linear relationships with species richness in the transgenic and nontransgenic rice fields.The rice varieties did not significantly influence the linear relationships.Our findings suggest that higher-taxon surrogacy could be a useful alternative to complete species inventory for risk assessments of transgenic rice.

  1. Mollusca from a species-rich deep-water Leptometra community in the Alboran Sea

    Directory of Open Access Journals (Sweden)

    Serge Gofas

    2014-12-01

    Full Text Available An exceptional species richness for Mollusca was found on Avempace bank (349-365 m, Djibouti group, Alboran Sea, where the most abundant species was the crinoid Leptometra phalangium. A sample of sediment sieved on a 0.5-mm mesh yielded 156 species of molluscs (83 live-taken, 1772 specimens with a high Shannon-Wiener diversity index (H’(log2=3.60. The dominant mollusc was Limopsis aurita and the six most common species accounted for 77% of the specimens. On the other hand, 42 species were represented by only one or two specimens. Two species are described as new, three more are first findings in the Mediterranean and two are first findings in Iberian waters. One-third of the species have not been reported from the neighbouring, well-explored Alboran Island platform. There is a considerable balance between the trophic groups, denoting a stable and structured community. Most of the species have an extensive Atlantic range, and most have a planktonic larval stage. Therefore, it can be hypothesized that the fauna benefits from a diverse influx of larvae carried in by the more superficial incoming Atlantic current. Because of its exceptional richness, this type of bathyal community with Leptometra and Limopsis should be considered a high priority for habitat conservation in the Mediterranean deep sea.

  2. Threatened species richness along a Himalayan elevational gradient: quantifying the influences of human population density, range size, and geometric constraints.

    Science.gov (United States)

    Paudel, Prakash Kumar; Sipos, Jan; Brodie, Jedediah F

    2018-02-07

    A crucial step in conserving biodiversity is to identify the distributions of threatened species and the factors associated with species threat status. In the biodiversity hotspot of the Himalaya, very little is known about which locations harbour the highest diversity of threatened species and whether diversity of such species is related to area, mid-domain effects (MDE), range size, or human density. In this study, we assessed the drivers of variation in richness of threatened birds, mammals, reptiles, actinopterygii, and amphibians along an elevational gradient in Nepal Himalaya. Although geometric constraints (MDE), species range size, and human population density were significantly related to threatened species richness, the interaction between range size and human population density was of greater importance. Threatened species richness was positively associated with human population density and negatively associated with range size. In areas with high richness of threatened species, species ranges tend to be small. The preponderance of species at risk of extinction at low elevations in the subtropical biodiversity hotspot could be due to the double impact of smaller range sizes and higher human density.

  3. Impacts of non-native Norway spruce plantation on abundance and species richness of ground beetles (Coleoptera: Carabidae

    Directory of Open Access Journals (Sweden)

    Z. Elek

    2001-06-01

    Full Text Available The impacts of non-native Norway spruce plantation on the abundance and species richness of carabids were studied in the Bükk National Park in Hungary, central Europe. Pitfall catches from recently established (5 yr old, young (15 yr after planting, middle-aged (30 yr after planting, old Norway spruce Picea abies plantation (50 yr after planting, and a native submontane beech forest (Fagetum sylvaticae as a control stand were compared.

    Our results showed that deciduous forest species decreased significantly in abundance in the plantations, and appeared in high abundance only in the native beech forest. Furthermore, open habitat species increased remarkably in abundance in the recently established plantation. Carabids were significantly more abundant and species rich in the native forest than in the plantations, while differences were not significant among the plantations. Multiple regression between the abundance and species richness of carabids and twelve environmental measurements showed that pH of the soil, herb cover and density of the carabids’ prey had a significant effect in determining abundance and species richness.

    Our results showed that plantation of non-native Norway spruce species had a detrimental effect on the composition of carabid communities and no regeneration could be observed during the growth of plantations even 50 yr after the establishment. This emphasises the importance of an active nature management practice to facilitate the recolonization of the native species.

  4. The shape of terrestrial abundance distributions

    Science.gov (United States)

    Alroy, John

    2015-01-01

    Ecologists widely accept that the distribution of abundances in most communities is fairly flat but heavily dominated by a few species. The reason for this is that species abundances are thought to follow certain theoretical distributions that predict such a pattern. However, previous studies have focused on either a few theoretical distributions or a few empirical distributions. I illustrate abundance patterns in 1055 samples of trees, bats, small terrestrial mammals, birds, lizards, frogs, ants, dung beetles, butterflies, and odonates. Five existing theoretical distributions make inaccurate predictions about the frequencies of the most common species and of the average species, and most of them fit the overall patterns poorly, according to the maximum likelihood–related Kullback-Leibler divergence statistic. Instead, the data support a low-dominance distribution here called the “double geometric.” Depending on the value of its two governing parameters, it may resemble either the geometric series distribution or the lognormal series distribution. However, unlike any other model, it assumes both that richness is finite and that species compete unequally for resources in a two-dimensional niche landscape, which implies that niche breadths are variable and that trait distributions are neither arrayed along a single dimension nor randomly associated. The hypothesis that niche space is multidimensional helps to explain how numerous species can coexist despite interacting strongly. PMID:26601249

  5. Effects of an inhibitor of phosphoenolpyruvate carboxylase on photosynthesis of the terrestrial forms of amphibious Eleocharis species.

    Science.gov (United States)

    Ueno, Osamu; Ishimaru, Ken

    2002-01-01

    The leafless amphibious sedge Eleocharis vivipara develops culms with C(4) traits and Kranz anatomy under terrestrial conditions, but develops culms with C(3) traits and non-Kranz anatomy under submerged conditions. The culms of the terrestrial form have high C(4) enzyme activities, while those of the submerged form have decreased C(4) enzyme activities. The culms accumulate ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in the mesophyll cells (MC) and the bundle sheath cells. The Rubisco in the MC may be responsible for the operation of the C(3) pathway in the submerged form. To verify the presence of the C(3) cycle in the MC, we examined the effects of 3,3-dichloro-2-(dihydroxyphosphinoylmethyl) -propenoate (DCDP), an inhibitor of phosphoenolpyruvate carboxylase (PEPC), on photosynthesis in culms of the terrestrial forms of E. vivipara and related amphibious species, E. baldwinii and E. retroflexa ssp. chaetaria. When 1 mM DCDP was fed via the transpiration stream to excised leaves, photosynthesis was inhibited completely in Fimbristylis dichotoma (C(4) control), but by only 20% in potato (C(3) control). In the terrestrial Eleocharis plants, the degree of inhibition of photosynthesis by DCDP was intermediate between those of the C(4) and C(3) plants, at 58-81%. These results suggest that photosynthesis under DCDP treatment in the terrestrial Eleocharis plants is due mainly to fixation of atmospheric CO(2) by Rubisco and probably the C(3) cycle in the MC. These features are reminiscent of those in C(4)-like plants. Differential effects of DCDP on photosynthesis of the 3 Eleocharis species are discussed in relation to differences in the degree of Rubisco accumulation and C(3) activity in the MC.

  6. Species-rich ecosystems are vulnerable to cascading extinctions in an increasingly variable world

    OpenAIRE

    Kaneryd, Linda; Borrvall, Charlotte; Berg, Sofia; Curtsdotter, Alva; Eklöf, Anna; Hauzy, Céline; Jonsson, Tomas; Münger, Peter; Setzer, Malin; Säterberg, Torbjörn; Ebenman, Bo

    2012-01-01

    Global warming leads to increased intensity and frequency of weather extremes. Such increased environmental variability might in turn result in increased variation in the demographic rates of interacting species with potentially important consequences for the dynamics of food webs. Using a theoretical approach, we here explore the response of food webs to a highly variable environment. We investigate how species richness and correlation in the responses of species to environmental fluctuation...

  7. Threatened and Endangered Terrestrial Animal Species Richness

    Data.gov (United States)

    U.S. Environmental Protection Agency — These data represent predicted current distributions of all U.S. listed threatened and endangered mammals, birds, reptiles, and amphibians in the Middle-Atlantic...

  8. The relative importance of climate and vegetation properties on patterns of North American breeding bird species richness

    International Nuclear Information System (INIS)

    Goetz, Scott J; Sun, Mindy; Zolkos, Scott; Hansen, Andy; Dubayah, Ralph

    2014-01-01

    Recent advances in remote sensing and ecological modeling warrant a timely and robust investigation of the ecological variables that underlie large-scale patterns of breeding bird species richness, particularly in the context of intensifying land use and climate change. Our objective was to address this need using an array of bioclimatic and remotely sensed data sets representing vegetation properties and structure, and other aspects of the physical environment. We first build models of bird species richness across breeding bird survey (BBS) routes, and then spatially predict richness across the coterminous US at moderately high spatial resolution (1 km). Predictor variables were derived from various sources and maps of species richness were generated for four groups (guilds) of birds with different breeding habitat affiliation (forest, grassland, open woodland, scrub/shrub), as well as all guilds combined. Predictions of forest bird distributions were strong (R 2 = 0.85), followed by grassland (0.76), scrub/shrub (0.63) and open woodland (0.60) species. Vegetation properties were generally the strongest determinants of species richness, whereas bioclimatic and lidar-derived vertical structure metrics were of variable importance and dependent upon the guild type. Environmental variables (climate and the physical environment) were also frequently selected predictors, but canopy structure variables were not as important as expected based on more local to regional scale studies. Relatively sparse sampling of canopy structure metrics from the satellite lidar sensor may have reduced their importance relative to other predictor variables across the study domain. We discuss these results in the context of the ecological drivers of species richness patterns, the spatial scale of bird diversity analyses, and the potential of next generation space-borne lidar systems relevant to vegetation and ecosystem studies. This study strengthens current understanding of bird species

  9. Species richness and patterns of invasion in plants, birds, and fishes in the United States

    Science.gov (United States)

    Thomas J. Stohlgren; David T. Barnett; Curtis H. Flather; Pam L. Fuller; Bruce G. Peterjohn; John T. Kartesz; Lawrence L. Master

    2006-01-01

    We quantified broad-scale patterns of species richness and species density (mean # species/km2) for native and non-indigenous plants, birds, and fishes in the continental USA and Hawaii. We hypothesized that the species density of native and non-indigenous taxa would generally decrease in northern latitudes and higher elevations following...

  10. Simulations of the Viking Gas Exchange Experiment using palagonite and Fe-rich montmorillonite as terrestrial analogs: implications for the surface composition of Mars.

    Science.gov (United States)

    Quinn, R; Orenberg, J

    1993-10-01

    Simulations of the Gas Exchange Experiment (GEX), one of the Viking Lander Biology Experiments, were run using palagonite and Fe-rich montmorillonite as terrestrial analogs of the Martian soil. These terrestrial analogs were exposed to a nutrient solution of the same composition as that of the Viking Landers under humid (no contact with nutrient) and wet (intimate contact) conditions. The headspace gases in the GEX sample cell were sampled and then analyzed by gas chromatography under both humid and wet conditions. Five gases were monitored: CO2, N2, O2, Ar, and Kr. It was determined that in order to simulate the CO2 gas changes of the Viking GEX experiment, the mixture of soil analog mineral plus nutrient medium must be slightly (pH = 7.4) to moderately basic (pH = 8.7). This conclusion suggests constraints upon the composition of terrestrial analogs to the Mars soil; acidic components may be present, but the overall mixture must be basic in order to simulate the Viking GEX results.

  11. Current and historical climate signatures to deconstructed tree species richness pattern in South America - doi: 10.4025/actascibiolsci.v35i2.14202

    Directory of Open Access Journals (Sweden)

    Daniel Paiva Silva

    2013-05-01

    Full Text Available The purpose of this study was to investigate the importance of present and historical climate as determinants of current species richness pattern of forestry trees in South America. The study predicted the distribution of 217 tree species using Maxent models, and calculated the potential species richness pattern, which was further deconstructed based on range sizes and modeled against current and historical climates predictors using Geographically Weighted Regressions (GWR analyses. The current climate explains more of the wide-ranging species richness patterns than that of the narrow-ranging species, while the historical climate explained an equally small amount of variance for both narrow-and-wide ranging tree species richness patterns. The richness deconstruction based on range size revealed that the influences of current and historical climate hypotheses underlying patterns in South American tree species richness differ from those found in the Northern Hemisphere. Notably, the historical climate appears to be an important determinant of richness only in regions with marked climate changes and proved Pleistocenic refuges, while the current climate predicts the species richness across those Neotropical regions, with non-evident refuges in the Last Glacial Maximum. Thus, this study's analyses show that these climate hypotheses are complementary to explain the South American tree species richness. Keywords: climate changes, glacial refuges, water-energy availability, GWR analysis, spatial non-stationarity

  12. Metazoan parasite species richness in Neotropical fishes: hotspots and the geography of biodiversity.

    Science.gov (United States)

    Luque, J L; Poulin, R

    2007-06-01

    Although research on parasite biodiversity has intensified recently, there are signs that parasites remain an underestimated component of total biodiversity in many regions of the planet. To identify geographical hotspots of parasite diversity, we performed qualitative and quantitative analyses of the parasite-host associations in fishes from Latin America and the Caribbean, a region that includes known hotspots of plant and animal biodiversity. The database included 10,904 metazoan parasite-host associations involving 1660 fish species. The number of host species with at least 1 parasite record was less than 10% of the total known fish species in the majority of countries. Associations involving adult endoparasites in actinopterygian fish hosts dominated the database. Across the whole region, no significant difference in parasite species richness was detected between marine and freshwater fishes. As a rule, host body size and study effort (number of studies per fish species) were good predictors of parasite species richness. Some interesting patterns emerged when we included only the regions with highest fish species biodiversity and study effort (Brazil, Mexico and the Caribbean Islands). Independently of differences in study effort or host body sizes, Mexico stands out as a hotspot of parasite diversity for freshwater fishes, as does Brasil for marine fishes. However, among 57 marine fish species common to all 3 regions, populations from the Caribbean consistently harboured more parasite species. These differences may reflect true biological patterns, or regional discrepancies in study effort and local priorities for fish parasitology research.

  13. The terrestrial Isopoda (Crustacea, Oniscidea) of Rapa Nui (Easter Island), with descriptions of two new species.

    Science.gov (United States)

    Taiti, Stefano; Wynne, J Judson

    2015-01-01

    Nine species of terrestrial isopods are reported for the Polynesian island of Rapa Nui (Easter Island) based upon museum materials and recent collections from field sampling. Most of these animals are non-native species, but two are new to science: Styloniscusmanuvaka sp. n. and Hawaiiosciarapui sp. n. Of these, the former is believed to be a Polynesian endemic as it has been recorded from Rapa Iti, Austral Islands, while the latter is identified as a Rapa Nui island endemic. Both of these new species are considered 'disturbance relicts' and appear restricted to the cave environment on Rapa Nui. A short key to all the oniscidean species presently recorded from Rapa Nui is provided. We also offered conservation and management recommendations for the two new isopod species.

  14. How many dinosaur species were there? Fossil bias and true richness estimated using a Poisson sampling model.

    Science.gov (United States)

    Starrfelt, Jostein; Liow, Lee Hsiang

    2016-04-05

    The fossil record is a rich source of information about biological diversity in the past. However, the fossil record is not only incomplete but has also inherent biases due to geological, physical, chemical and biological factors. Our knowledge of past life is also biased because of differences in academic and amateur interests and sampling efforts. As a result, not all individuals or species that lived in the past are equally likely to be discovered at any point in time or space. To reconstruct temporal dynamics of diversity using the fossil record, biased sampling must be explicitly taken into account. Here, we introduce an approach that uses the variation in the number of times each species is observed in the fossil record to estimate both sampling bias and true richness. We term our technique TRiPS (True Richness estimated using a Poisson Sampling model) and explore its robustness to violation of its assumptions via simulations. We then venture to estimate sampling bias and absolute species richness of dinosaurs in the geological stages of the Mesozoic. Using TRiPS, we estimate that 1936 (1543-2468) species of dinosaurs roamed the Earth during the Mesozoic. We also present improved estimates of species richness trajectories of the three major dinosaur clades: the sauropodomorphs, ornithischians and theropods, casting doubt on the Jurassic-Cretaceous extinction event and demonstrating that all dinosaur groups are subject to considerable sampling bias throughout the Mesozoic. © 2016 The Authors.

  15. Impact of non-native terrestrial mammals on the structure of the terrestrial mammal food web of Newfoundland, Canada.

    Directory of Open Access Journals (Sweden)

    Justin S Strong

    Full Text Available The island of Newfoundland is unique because it has as many non-native terrestrial mammals as native ones. The impacts of non-native species on native flora and fauna can be profound and invasive species have been identified as one of the primary drivers of species extinction. Few studies, however, have investigated the effects of a non-native species assemblage on community and ecosystem properties. We reviewed the literature to build the first terrestrial mammal food web for the island of Newfoundland and then used network analyses to investigate how the timing of introductions and trophic position of non-native species has affected the structure of the terrestrial mammal food web in Newfoundland. The first non-native mammals (house mouse and brown rat became established in Newfoundland with human settlement in the late 15th and early 16th centuries. Coyotes and southern red-backed voles are the most recent mammals to establish themselves on the island in 1985 and 1998, respectively. The fraction of intermediate species increased with the addition of non-native mammals over time whereas the fraction of basal and top species declined over time. This increase in intermediate species mediated by non-native species arrivals led to an overall increase in the terrestrial mammal food web connectance and generality (i.e. mean number of prey per predator. This diverse prey base and sources of carrion may have facilitated the natural establishment of coyotes on the island. Also, there is some evidence that the introduction of non-native prey species such as the southern red-backed vole has contributed to the recovery of the threatened American marten. Long-term monitoring of the food web is required to understand and predict the impacts of the diverse novel interactions that are developing in the terrestrial mammal food web of Newfoundland.

  16. Odd man out : why are there fewer plant species in African rain forests ?

    OpenAIRE

    Couvreur, Thomas

    2015-01-01

    Although tropical rain forests represent the most species-rich terrestrial ecosystem on the planet, the three main rain forest regions (Neotropics, South-East Asia and continental Africa) are not equally diverse. Africa has been labeled the "odd man out" because of its perceived lower species diversity when compared to the Neotropics or South-East Asia. Understanding why, within a biome, certain regions have higher or lower species diversity provides important insights into the evolution of b...

  17. Geographical, Temporal and Environmental Determinants of Bryophyte Species Richness in the Macaronesian Islands

    Science.gov (United States)

    Aranda, Silvia C.; Gabriel, Rosalina; Borges, Paulo A. V.; Santos, Ana M. C.; de Azevedo, Eduardo Brito; Patiño, Jairo; Hortal, Joaquín; Lobo, Jorge M.

    2014-01-01

    Species richness on oceanic islands has been related to a series of ecological factors including island size and isolation (i.e. the Equilibrium Model of Island Biogeography, EMIB), habitat diversity, climate (i.e., temperature and precipitation) and more recently island ontogeny (i.e. the General Dynamic Model of oceanic island biogeography, GDM). Here we evaluate the relationship of these factors with the diversity of bryophytes in the Macaronesian region (Azores, Madeira, Canary Islands and Cape Verde). The predictive power of EMIB, habitat diversity, climate and the GDM on total bryophyte richness, as well as moss and liverwort richness (the two dominant bryophyte groups), was evaluated through ordinary least squares regressions. After choosing the best subset of variables using inference statistics, we used partial regression analyses to identify the independent and shared effects of each model. The variables included within each model were similar for mosses and liverworts, with orographic mist layer being one of the most important predictors of richness. Models combining climate with either the GDM or habitat diversity explained most of richness variation (up to 91%). There was a high portion of shared variance between all pairwise combinations of factors in mosses, while in liverworts around half of the variability in species richness was accounted for exclusively by climate. Our results suggest that the effects of climate and habitat are strong and prevalent in this region, while geographical factors have limited influence on Macaronesian bryophyte diversity. Although climate is of great importance for liverwort richness, in mosses its effect is similar to or, at least, indiscernible from the effect of habitat diversity and, strikingly, the effect of island ontogeny. These results indicate that for highly vagile taxa on oceanic islands, the dispersal process may be less important for successful colonization than the availability of suitable ecological

  18. No consistent effect of plant species richness on resistance to simulated climate change for above- or below-ground processes in managed grasslands.

    Science.gov (United States)

    Dormann, Carsten F; von Riedmatten, Lars; Scherer-Lorenzen, Michael

    2017-06-17

    Species richness affects processes and functions in many ecosystems. Since management of temperate grasslands is directly affecting species composition and richness, it can indirectly govern how systems respond to fluctuations in environmental conditions. Our aim in this study was to investigate whether species richness in managed grasslands can buffer the effects of drought and warming manipulations and hence increase the resistance to climate change. We established 45 plots in three regions across Germany, each with three different management regimes (pasture, meadow and mown pasture). We manipulated spring warming using open-top chambers and summer drought using rain-out shelters for 4 weeks. Measurements of species richness, above- and below-ground biomass and soil carbon and nitrogen concentrations showed significant but inconsistent differences among regions, managements and manipulations. We detected a three-way interaction between species richness, management and region, indicating that our study design was sensitive enough to detect even intricate effects. We could not detect a pervasive effect of species richness on biomass differences between treatments and controls, indicating that a combination of spring warming and summer drought effects on grassland systems are not consistently moderated by species richness. We attribute this to the relatively high number of species even at low richness levels, which already provides the complementarity required for positive biodiversity-ecosystem functioning relationships. A review of the literature also indicates that climate manipulations largely fail to show richness-buffering, while natural experiments do, suggesting that such manipulations are milder than reality or incur treatment artefacts.

  19. Seed plant phylogenetic diversity and species richness in conservation planning within a global biodiversity hotspot in eastern Asia.

    Science.gov (United States)

    Li, Rong; Kraft, Nathan J B; Yu, Haiying; Li, Heng

    2015-12-01

    One of the main goals of conservation biology is to understand the factors shaping variation in biodiversity across the planet. This understanding is critical for conservation planners to be able to develop effective conservation strategies. Although many studies have focused on species richness and the protection of rare and endemic species, less attention has been paid to the protection of the phylogenetic dimension of biodiversity. We explored how phylogenetic diversity, species richness, and phylogenetic community structure vary in seed plant communities along an elevational gradient in a relatively understudied high mountain region, the Dulong Valley, in southeastern Tibet, China. As expected, phylogenetic diversity was well correlated with species richness among the elevational bands and among communities. At the community level, evergreen broad-leaved forests had the highest levels of species richness and phylogenetic diversity. Using null model analyses, we found evidence of nonrandom phylogenetic structure across the region. Evergreen broad-leaved forests were phylogenetically overdispersed, whereas other vegetation types tended to be phylogenetically clustered. We suggest that communities with high species richness or overdispersed phylogenetic structure should be a focus for biodiversity conservation within the Dulong Valley because these areas may help maximize the potential of this flora to respond to future global change. In biodiversity hotspots worldwide, we suggest that the phylogenetic structure of a community may serve as a useful measure of phylogenetic diversity in the context of conservation planning. © 2015 Society for Conservation Biology.

  20. Functional-diversity indices can be driven by methodological choices and species richness.

    Science.gov (United States)

    Poos, Mark S; Walker, Steven C; Jackson, Donald A

    2009-02-01

    Functional diversity is an important concept in community ecology because it captures information on functional traits absent in measures of species diversity. One popular method of measuring functional diversity is the dendrogram-based method, FD. To calculate FD, a variety of methodological choices are required, and it has been debated about whether biological conclusions are sensitive to such choices. We studied the probability that conclusions regarding FD were sensitive, and that patterns in sensitivity were related to alpha and beta components of species richness. We developed a randomization procedure that iteratively calculated FD by assigning species into two assemblages and calculating the probability that the community with higher FD varied across methods. We found evidence of sensitivity in all five communities we examined, ranging from a probability of sensitivity of 0 (no sensitivity) to 0.976 (almost completely sensitive). Variations in these probabilities were driven by differences in alpha diversity between assemblages and not by beta diversity. Importantly, FD was most sensitive when it was most useful (i.e., when differences in alpha diversity were low). We demonstrate that trends in functional-diversity analyses can be largely driven by methodological choices or species richness, rather than functional trait information alone.

  1. The origins of species richness in the Hymenoptera: insights from a family-level supertree

    Directory of Open Access Journals (Sweden)

    Davis Robert B

    2010-04-01

    Full Text Available Abstract Background The order Hymenoptera (bees, ants, wasps, sawflies contains about eight percent of all described species, but no analytical studies have addressed the origins of this richness at family-level or above. To investigate which major subtaxa experienced significant shifts in diversification, we assembled a family-level phylogeny of the Hymenoptera using supertree methods. We used sister-group species-richness comparisons to infer the phylogenetic position of shifts in diversification. Results The supertrees most supported by the underlying input trees are produced using matrix representation with compatibility (MRC (from an all-in and a compartmentalised analysis. Whilst relationships at the tips of the tree tend to be well supported, those along the backbone of the tree (e.g. between Parasitica superfamilies are generally not. Ten significant shifts in diversification (six positive and four negative are found common to both MRC supertrees. The Apocrita (wasps, ants, bees experienced a positive shift at their origin accounting for approximately 4,000 species. Within Apocrita other positive shifts include the Vespoidea (vespoid wasps/ants containing 24,000 spp., Anthophila + Sphecidae (bees/thread-waisted wasps; 22,000 spp., Bethylidae + Chrysididae (bethylid/cuckoo wasps; 5,200 spp., Dryinidae (dryinid wasps; 1,100 spp., and Proctotrupidae (proctotrupid wasps; 310 spp.. Four relatively species-poor families (Stenotritidae, Anaxyelidae, Blasticotomidae, Xyelidae have undergone negative shifts. There are some two-way shifts in diversification where sister taxa have undergone shifts in opposite directions. Conclusions Our results suggest that numerous phylogenetically distinctive radiations contribute to the richness of large clades. They also suggest that evolutionary events restricting the subsequent richness of large clades are common. Problematic phylogenetic issues in the Hymenoptera are identified, relating especially to

  2. Diversification of tanagers, a species rich bird group, from lowlands to montane regions of South America

    DEFF Research Database (Denmark)

    Fjeldså, Jon; Rahbek, Carsten

    2006-01-01

    in the Atlantic forests of south-eastern Brazil, and moderate densities of widespread species in the tropical lowlands. Contemporary climate explains well the variation in species richness for the 25% most widespread species; for the remaining 75% of species with more restricted distributions, variation can only...

  3. The role of spatial scale and the perception of large-scale species-richness patterns

    DEFF Research Database (Denmark)

    Rahbek, Carsten

    2005-01-01

    Despite two centuries of exploration, our understanding of factors determining the distribution of life on Earth is in many ways still in its infancy. Much of the disagreement about governing processes of variation in species richness may be the result of differences in our perception of species...

  4. Quantifying establishment limitations during the ecological restoration of species-rich Nardus grassland

    NARCIS (Netherlands)

    Daele, Van Frederik; Wasof, Safaa; Demey, Andreas; Schelfhout, Stephanie; Schrijver, De A.; Baeten, Lander; Ruijven, van Jasper; Mertens, Jan; Verheyen, Kris

    2017-01-01

    Aims: Successful establishment of species-rich Nardus grasslands on ex-agricultural land requires identification and removal of barriers to effective seed germination and seedling survival. Therefore, we investigate how germination and early development are affected by soil conditions from

  5. Patrones espaciales de la riqueza específica de las culebras Thamnophis en México Spatial patterns of species richness of garter snakes Thamnophis in Mexico

    Directory of Open Access Journals (Sweden)

    Crystian Sadiel Venegas-Barrera

    2011-03-01

    Full Text Available Se identificaron tanto las áreas de mayor riqueza específica de las culebras del género Thamnophis y su presencia en las provincias biogeográficas y las Regiones Terrestres Prioritarias (RTP, como los factores antropogénicos que pueden influir en su distribución. Con la combinación de mapas de distribución potencial de las especies se creó un mapa de riqueza específica para calcular el porcentaje de celdas ocupadas por el género dentro de cada provincia biogeográfica, de cada RTP y conocer el tipo de uso de suelo. Además, se obtuvo la complementariedad de especies y la ordenación de las RTP a partir de su composición específica. El género se distribuyó en el 80.5% de México, en todas sus provincias biogeográficas. Los estados de Durango, Michoacán, Puebla, Veracruz y Oaxaca presentaron la mayor riqueza específica. Potencialmente, el género puede encontrarse en el 96% de las RTP de México con un patrón altitudinal y climático. De 6 grupos de las RTP, el grupo oriental presentó la mayor riqueza específica. El 25.8% de la distribución potencial del género se encontró en áreas modificadas por el hombre. Se discuten los patrones de distribución bajo una perspectiva ecológica, biogeográfica y de conservación y se sugiere comprobar la riqueza específica potencial con estudios de campo.We identified areas of high species richness of snakes of the genus Thamnophis, their presence within biogeographic provinces and Terrestrial Priority Regions (TPR. We also identified anthropogenic factors that may influence their distribution. We created a map of species richness from the combination of potential distribution maps of species to calculate the percentage of cells occupied by the genus within each biogeographic province, TPR and type of land use. In addition, we obtained the complementarity of species and the ordination of TPR from its species composition. The genus is distributed in 80.5% of Mexico, in all biogeographic

  6. Terrestrial Macrofungal Diversity from the Tropical Dry Evergreen Biome of Southern India and Its Potential Role in Aerobiology.

    Science.gov (United States)

    Priyamvada, Hema; Akila, M; Singh, Raj Kamal; Ravikrishna, R; Verma, R S; Philip, Ligy; Marathe, R R; Sahu, L K; Sudheer, K P; Gunthe, S S

    2017-01-01

    Macrofungi have long been investigated for various scientific purposes including their food and medicinal characteristics. Their role in aerobiology as a fraction of the primary biological aerosol particles (PBAPs), however, has been poorly studied. In this study, we present a source of macrofungi with two different but interdependent objectives: (i) to characterize the macrofungi from a tropical dry evergreen biome in southern India using advanced molecular techniques to enrich the database from this region, and (ii) to assess whether identified species of macrofungi are a potential source of atmospheric PBAPs. From the DNA analysis, we report the diversity of the terrestrial macrofungi from a tropical dry evergreen biome robustly supported by the statistical analyses for diversity conclusions. A total of 113 macrofungal species belonging to 54 genera and 23 families were recorded, with Basidiomycota and Ascomycota constituting 96% and 4% of the species, respectively. The highest species richness was found in the family Agaricaceae (25.3%) followed by Polyporaceae (15.3%) and Marasmiaceae (10.8%). The difference in the distribution of commonly observed macrofungal families over this location was compared with other locations in India (Karnataka, Kerala, Maharashtra, and West Bengal) using two statistical tests. The distributions of the terrestrial macrofungi were distinctly different in each ecosystem. We further attempted to demonstrate the potential role of terrestrial macrofungi as a source of PBAPs in ambient air. In our opinion, the findings from this ecosystem of India will enhance our understanding of the distribution, diversity, ecology, and biological prospects of terrestrial macrofungi as well as their potential to contribute to airborne fungal aerosols.

  7. Towards a global terrestrial species monitoring program

    Science.gov (United States)

    Schmeller, Dirk S.; Julliard, Romain; Bellingham, Peter J.; Böhm, Monika; Brummitt, Neil; Chiarucci, Alessandro; Couvet, Denis; Elmendorf, Sarah; Forsyth, David M.; Moreno, Jaime García; Gregory, Richard D.; Magnusson, William E.; Martin, Laura J.; McGeoch, Melodie A.; Mihoub, Jean-Baptiste; Pereira, Henrique M.; Proença, Vânia; van Swaay, Chris A.M.; Yahara, Tetsukazu; Belnap, Jayne

    2015-01-01

    Introduction: The Convention for Biological Diversity’s (CBD) Strategic Plan for Biodiversity 2011-2020 envisions that “By 2050, biodiversity is valued, conserved, restored and wisely used, maintaining ecosystem services, sustaining a healthy planet and delivering benefits essential for all people.” Although 193 parties have adopted these goals, there is little infrastructure in place to monitor global biodiversity trends. Recent international conservation policy requires such data to be up-to-date, reliable, comparable among sites, relevant, and understandable; as is becoming obvious from the work plan adopted by the Intergovernmental Panel for Biodiversity and Ecosystem Services (IPBES: www.ipbes.net/; http://tinyurl.com/ohdnknq). In order to meet the five strategic goals of the Strategic Plan for Biodiversity 2011-2020 and its 20 accompanying Aichi Targets for 2020 (www.cbd.int/sp/targets/), advances need to be made in coordinating large-scale biodiversity monitoring and linking these with environmental data to develop a comprehensive Global Observation Network, as is the main idea behind GEOSS the Global Earth Observation System of Systems (Christian 2005)...Here we identify ten requirements important for the successful implementation of a global biodiversity monitoring network under the flag of GEO BON and especially a global terrestrial species monitoring program.

  8. Geographic variation in species richness, rarity, and the selection of areas for conservation: An integrative approach with Brazilian estuarine fishes

    Science.gov (United States)

    Vilar, Ciro C.; Joyeux, Jean-Christophe; Spach, Henry L.

    2017-09-01

    While the number of species is a key indicator of ecological assemblages, spatial conservation priorities solely identified from species richness are not necessarily efficient to protect other important biological assets. Hence, the results of spatial prioritization analysis would be greatly enhanced if richness were used in association to complementary biodiversity measures. In this study, geographic patterns in estuarine fish species rarity (i.e. the average range size in the study area), endemism and richness, were mapped and integrated to identify regions important for biodiversity conservation along the Brazilian coast. Furthermore, we analyzed the effectiveness of the national system of protected areas to represent these regions. Analyses were performed on presence/absence data of 412 fish species in 0.25° latitudinal bands covering the entire Brazilian biogeographical province. Species richness, rarity and endemism patterns differed and strongly reflected biogeographical limits and regions. However, among the existing 154 latitudinal bands, 48 were recognized as conservation priorities by concomitantly harboring high estuarine fish species richness and assemblages of geographically rare species. Priority areas identified for all estuarine fish species largely differed from those identified for Brazilian endemics. Moreover, there was no significant correlation between the different aspects of the fish assemblages considered (i.e. species richness, endemism or rarity), suggesting that designating reserves based on a single variable may lead to large gaps in the overall protection of biodiversity. Our results further revealed that the existing system of protected areas is insufficient for representing the priority bands we identified. This highlights the urgent need for expanding the national network of protected areas to maintain estuarine ecosystems with high conservation value.

  9. Social organization influences the exchange and species richness of medicinal plants in Amazonian homegardens.

    Science.gov (United States)

    2016-03-01

    Medicinal plants provide indigenous and peasant communities worldwide with means to meet their healthcare needs. Homegardens often act as medicine cabinets, providing easily accessible medicinal plants for household needs. Social structure and social exchanges have been proposed as factors influencing the species diversity that people maintain in their homegardens. Here, we assess the association between the exchange of medicinal knowledge and plant material and medicinal plant richness in homegardens. Using Tsimane' Amazonian homegardens as a case study, we explore whether social organization shapes exchanges of medicinal plant knowledge and medicinal plant material. We also use network centrality measures to evaluate people's location and performance in medicinal plant knowledge and plant material exchange networks. Our results suggest that social organization, specifically kinship and gender relations, influences medicinal plant exchange patterns significantly. Homegardens total and medicinal plant species richness are related to gardeners' centrality in the networks, whereby people with greater centrality maintain greater plant richness. Thus, together with agroecological conditions, social relations among gardeners and the culturally specific social structure seem to be important determinants of plant richness in homegardens. Understanding which factors pattern general species diversity in tropical homegardens, and medicinal plant diversity in particular, can help policy makers, health providers, and local communities to understand better how to promote and preserve medicinal plants in situ. Biocultural approaches that are also gender sensitive offer a culturally appropriate means to reduce the global and local loss of both biological and cultural diversity.

  10. Landscape and Local Correlates of Bee Abundance and Species Richness in Urban Gardens.

    Science.gov (United States)

    Quistberg, Robyn D; Bichier, Peter; Philpott, Stacy M

    2016-03-31

    Urban gardens may preserve biodiversity as urban population densities increase, but this strongly depends on the characteristics of the gardens and the landscapes in which they are embedded. We investigated whether local and landscape characteristics are important correlates of bee (Hymenoptera: Apiformes) abundance and species richness in urban community gardens. We worked in 19 gardens in the California central coast and sampled bees with aerial nets and pan traps. We measured local characteristics (i.e., vegetation and ground cover) and used the USGS National Land Cover Database to classify the landscape surrounding our garden study sites at 2 km scales. We classified bees according to nesting type (i.e., cavity, ground) and body size and determined which local and landscape characteristics correlate with bee community characteristics. We found 55 bee species. One landscape and several local factors correlated with differences in bee abundance and richness for all bees, cavity-nesting bees, ground-nesting bees, and different sized bees. Generally, bees were more abundant and species rich in bigger gardens, in gardens with higher floral abundance, less mulch cover, more bare ground, and with more grass. Medium bees were less abundant in sites surrounded by more medium intensity developed land within 2 km. The fact that local factors were generally more important drivers of bee abundance and richness indicates a potential for gardeners to promote bee conservation by altering local management practices. In particular, increasing floral abundance, decreasing use of mulch, and providing bare ground may promote bees in urban gardens. © The Authors 2016. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  11. [Ecological risk assessment of dam construction for terrestrial plant species in middle reach of Lancangjiang River, Southwest China].

    Science.gov (United States)

    Li, Xiao-Yan; Dong, Shi-Kui; Liu, Shi-Liang; Peng, Ming-Chun; Li, Jin-Peng; Zhao, Qing-He; Zhang, Zhao-Ling

    2012-08-01

    Taking the surrounding areas of Xiaowan Reservoir in the middle reach of Lancangjiang River as study area, and based on the vegetation investigation at three sites including electricity transmission area (site 1), electricity-transfer substation and roadsides to the substation (site 2), and emigration area (site 3) in 1997 (before dam construction), another investigation was conducted on the vegetation composition, plant coverage, and dominant species at the same sites in 2010 (after dam construction), aimed to evaluate the ecological risk of the dam construction for the terrestrial plant species in middle reach of Lancangjiang River. There was an obvious difference in the summed dominance ratio of dominant species at the three sites before and after the dam construction. According the types of species (dominant and non-dominant species) and the changes of plant dominance, the ecological risk (ER) for the plant species was categorized into 0 to IV, i.e., no or extremely low ecological risk (0), low ecological risk (I), medium ecological risk (II), high ecological risk (III), and extremely high ecological risk (IV). As affected by the dam construction, the majority of the species were at ER III, and a few species were at ER IV. The percentage of the plant species at ER III and ER IV at site 3 was higher than that at sites 1 and 2. The decrease or loss of native plants and the increase of alien or invasive plants were the major ecological risks caused by the dam construction. Effective protection strategies should be adopted to mitigate the ecological risk of the dam construction for the terrestrial plants at species level.

  12. Organic, integrated and conventional management in apple orchards: effect on plant species composition, richness and diversity

    Directory of Open Access Journals (Sweden)

    Zdeňka Lososová

    2011-01-01

    Full Text Available The study was conducted to assess the effect of conventional, integrated and organic management on differences in plant species composition, richness and diversity. The plants were studied in triads of orchards situated in three regions of the Czech Republic. Data about species occurrences were collected on 15 permanent plots in the tree rows and 15 plots between tree rows in each of the apple orchards during 2009. A total of 201 vascular plant species (127 native species, 65 archaeophytes, and 9 neophytes were found. Management type and also different regional conditions had a significant effect on plant species composition and on diversity parameters of orchard spontaneous vegetation. Species richness and species pool was significantly higher in the organic orchards than in the differently managed orchards. Management type had significant effect on proportions of archaeophytes, and also neophytes in apple orchards. The results showed that a change from conventional to integrated and organic management in apple orchards lead to higher plant species diversity and to changes in plant species composition.

  13. Climate change velocity since the Last Glacial Maximum and its importance for patterns of species richness and range size

    DEFF Research Database (Denmark)

    Sandel, Brody Steven; Arge, Lars Allan; Svenning, J.-C.

    to fully occupy suitable habitat, or when local diversification rates are depressed by local population extinctions and changing selective regimes. Locations with long-term climate instability should therefore show reduced species richness with small-ranged species particularly missing from the community...... these predictions using global data on mammal and amphibian distributions. Consistent with our predictions, richness of small-ranged species of both groups was negatively associated with velocity. Velocity generally explained more variation in richness than did the simple climate anomaly. Climate velocity appears...... to capture an important historical signal on current mammal and amphibian distributions....

  14. Variation in local abundance and species richness of stream fishes in relation to dispersal barriers: Implications for management and conservation

    Science.gov (United States)

    Nislow, K.H.; Hudy, M.; Letcher, B.H.; Smith, E.P.

    2011-01-01

    1.Barriers to immigration, all else being equal, should in principle depress local abundance and reduce local species richness. These issues are particularly relevant to stream-dwelling species when improperly designed road crossings act as barriers to migration with potential impacts on the viability of upstream populations. However, because abundance and richness are highly spatially and temporally heterogeneous and the relative importance of immigration on demography is uncertain, population- and community-level effects can be difficult to detect. 2.In this study, we tested the effects of potential barriers to upstream movements on the local abundance and species richness of a diverse assemblage of resident stream fishes in the Monongahela National Forest, West Virginia, U.S.A. Fishes were sampled using simple standard techniques above- and below road crossings that were either likely or unlikely to be barriers to upstream fish movements (based on physical dimensions of the crossing). We predicted that abundance of resident fishes would be lower in the upstream sections of streams with predicted impassable barriers, that the strength of the effect would vary among species and that variable effects on abundance would translate into lower species richness. 3.Supporting these predictions, the statistical model that best accounted for variation in abundance and species richness included a significant interaction between location (upstream or downstream of crossing) and type (passable or impassable crossing). Stream sections located above predicated impassable culverts had fewer than half the number of species and less than half the total fish abundance, while stream sections above and below passable culverts had essentially equivalent richness and abundance. 4.Our results are consistent with the importance of immigration and population connectivity to local abundance and species richness of stream fishes. In turn, these results suggest that when measured at

  15. Incorporating biodiversity into rangeland health: Plant species richness and diversity in great plains grasslands

    Science.gov (United States)

    Symstad, Amy J.; Jonas, Jayne L.

    2011-01-01

    Indicators of rangeland health generally do not include a measure of biodiversity. Increasing attention to maintaining biodiversity in rangelands suggests that this omission should be reconsidered, and plant species richness and diversity are two metrics that may be useful and appropriate. Ideally, their response to a variety of anthropogenic and natural drivers in the ecosystem of interest would be clearly understood, thereby providing a means to diagnose the cause of decline in an ecosystem. Conceptual ecological models based on ecological principles and hypotheses provide a framework for this understanding, but these models must be supported by empirical evidence if they are to be used for decision making. To that end, we synthesize results from published studies regarding the responses of plant species richness and diversity to drivers that are of management concern in Great Plains grasslands, one of North America's most imperiled ecosystems. In the published literature, moderate grazing generally has a positive effect on these metrics in tallgrass prairie and a neutral to negative effect in shortgrass prairie. The largest published effects on richness and diversity were caused by moderate grazing in tallgrass prairies and nitrogen fertilization in shortgrass prairies. Although weather is often cited as the reason for considerable annual fluctuations in richness and diversity, little information about the responses of these metrics to weather is available. Responses of the two metrics often diverged, reflecting differences in their sensitivity to different types of changes in the plant community. Although sufficient information has not yet been published for these metrics to meet all the criteria of a good indicator in Great Plains Grasslands, augmenting current methods of evaluating rangeland health with a measure of plant species richness would reduce these shortcomings and provide information critical to managing for biodiversity.

  16. No evidence of complementary water use along a plant species richness gradient in temperate experimental grasslands.

    Directory of Open Access Journals (Sweden)

    Dörte Bachmann

    Full Text Available Niche complementarity in resource use has been proposed as a key mechanism to explain the positive effects of increasing plant species richness on ecosystem processes, in particular on primary productivity. Since hardly any information is available for niche complementarity in water use, we tested the effects of plant diversity on spatial and temporal complementarity in water uptake in experimental grasslands by using stable water isotopes. We hypothesized that water uptake from deeper soil depths increases in more diverse compared to low diverse plant species mixtures. We labeled soil water in 8 cm (with 18O and 28 cm depth (with ²H three times during the 2011 growing season in 40 temperate grassland communities of varying species richness (2, 4, 8 and 16 species and functional group number and composition (legumes, grasses, tall herbs, small herbs. Stable isotope analyses of xylem and soil water allowed identifying the preferential depth of water uptake. Higher enrichment in 18O of xylem water than in ²H suggested that the main water uptake was in the upper soil layer. Furthermore, our results revealed no differences in root water uptake among communities with different species richness, different number of functional groups or with time. Thus, our results do not support the hypothesis of increased complementarity in water use in more diverse than in less diverse communities of temperate grassland species.

  17. Frog species richness, composition and beta-diversity in coastal Brazilian restinga habitats.

    Science.gov (United States)

    Rocha, C F D; Hatano, F H; Vrcibradic, D; Van Sluys, M

    2008-02-01

    We studied the species richness and composition of frogs in 10 restinga habitats (sand dune environments dominated by herbaceous and shrubby vegetation) along approximately 1500 km of coastal areas of three Brazilian States: Rio de Janeiro (Grumari, Maricá, Massambaba, Jurubatiba and Grussaí), Espírito Santo (Praia das Neves and Setiba) and Bahia (Prado and Trancoso). We estimated beta-diversity and similarity among areas and related these parameters to geographic distance between areas. All areas were surveyed with a similar sampling procedure. We found 28 frog species belonging to the families Hylidae, Microhylidae, Leptodactylidae and Bufonidae. Frogs in restingas were in general nocturnal with no strictly diurnal species. The richest restinga was Praia das Neves (13 species), followed by Grussaí and Trancoso (eight species in each). The commonest species in the restingas was Scinax alter (found in eight restingas), followed by Aparasphenodon brunoi (seven areas). Our data shows that richness and composition of frog communities vary consistently along the eastern Brazilian coast and, in part, the rate of species turnover is affected by the distance among areas. Geographic distance explained approximately 12% of species turnover in restingas and about 9.5% of similarity among frog assemblages. Although geographic distance somewhat affects frog assemblages, other factors (e.g. historical factors, disturbances) seem to be also involved in explaining present frog assemblage composition in each area and species turnover among areas. The frog fauna along restinga habitats was significantly nested (matrix community temperature = 26.13 degrees; p = 0.007). Our data also showed that the most hospitable restinga was Praia das Neves and indicated that this area should be protected as a conservation unit. Frog assemblage of each area seems to partially represent a nested subset of the original assemblage, although we should not ignore the importance of historical

  18. High Species Richness of Scinax Treefrogs (Hylidae in a Threatened Amazonian Landscape Revealed by an Integrative Approach.

    Directory of Open Access Journals (Sweden)

    Miquéias Ferrão

    Full Text Available Rising habitat loss is one of the main drivers of the global amphibian decline. Nevertheless, knowledge of amphibian diversity needed for effective habitat protection is still highly inadequate in remote tropical regions, the greater part of the Amazonia. In this study we integrated molecular, morphological and bioacoustic evidence to evaluate the species richness of the treefrogs genus Scinax over a 1000 km transect across rainforest of the Purus-Madeira interfluve, and along the east bank of the upper Madeira river, Brazilian Amazonia. Analysis revealed that 82% of the regional species richness of Scinax is still undescribed; two nominal species, seven confirmed candidate species, two unconfirmed candidate species, and one deep conspecific lineage were detected in the study area. DNA barcoding based analysis of the 16s rRNA gene indicates possible existence of three discrete species groups within the genus Scinax, in addition to the already-known S. rostratus species Group. Quantifying and characterizing the number of undescribed Scinax taxa on a regional scale, we provide a framework for future taxonomic study in Amazonia. These findings indicate that the level to which Amazonian anura species richness has been underestimated is far greater than expected. Consequently, special attention should be paid both to taxonomic studies and protection of the still-neglected Amazonian Scinax treefrogs.

  19. Savanna ant species richness is maintained along a bioclimatic gradient of increasing latitude and decreasing rainfall in northern Australia

    DEFF Research Database (Denmark)

    Andersen, Alan N.; Del Toro, Israel; Parr, Catherine L.

    2015-01-01

    of 246 species from 37 genera. Mean observed species richness pooled across sampling periods was similar at sand (85.4) and loam (82.2) sites, but was less than half this at clay sites (40.0). Ant communities were also compositionally distinct on clay soils compared with sands and loams. Individual...... genera showed variable diversity patterns, ranging from a linear increase to a linear decrease in species richness along the NATT. However, total species richness was relatively uniform along the gradient. Patterns of ant species turnover were consistent with previously recognized biogeographical......Aim: Using a standardized sampling protocol along a 600-km transect in northern Australia, we tested whether ant diversity within a single biome, tropical savanna, decreases with increasing latitude (as a surrogate of temperature) and decreasing rainfall, as is expected for biodiversity in general...

  20. Relative importance of current and past landscape structure and local habitat conditions for plant species richness in dry grassland-like forest openings.

    Science.gov (United States)

    Husáková, Iveta; Münzbergová, Zuzana

    2014-01-01

    In fragmented landscapes, plant species richness may depend not only on local habitat conditions but also on landscape structure. In addition, both present and past landscape structure may be important for species richness. There are, however, only a few studies that have investigated the relative importance of all of these factors. The aim of this study was to examine the effect of current and past landscape structures and habitat conditions on species richness at dry grassland-like forest openings in a forested landscape and to assess their relative importance for species richness. We analyzed information on past and present landscape structures using aerial photographs from 1938, 1973, 1988, 2000 and 2007. We calculated the area of each locality and its isolation in the present and in the past and the continuity of localities in GIS. At each locality, we recorded all vascular plant species (296 species in 110 forest openings) and information on abiotic conditions of the localities. We found that the current species richness of the forest openings was significantly determined by local habitat conditions as well as by landscape structure in the present and in the past. The highest species richness was observed on larger and more heterogeneous localities with rocks and shallow soils, which were already large and well connected to other localities in 1938. The changes in the landscape structure in the past can thus have strong effects on current species richness. Future studies attempting to understand determinants of species diversity in fragmented landscapes should also include data on past landscape structure, as it may in fact be more important than the present structure.

  1. Pollen Deposition Is More Important than Species Richness for Seed Set in Luffa Gourd.

    Science.gov (United States)

    Ali, M; Saeed, S; Sajjad, A

    2016-10-01

    In the context of global biodiversity decline, it is imperative to understand the different aspects of bee communities for sustaining the vital ecosystem service of pollination. Bee species can be assigned to functional groups (average difference among species in functionally related traits) on the basis of complementarity (trait variations exhibited by individual organisms) in their behavior but is not yet known which functional group trait is most important for seed set. In this study, first, the functional groups of bees were made based on their five selected traits (pollen deposition, visitation rate, stay time, visiting time of the day, body size) and then related to the seed set of obligate cross-pollinated Luffa gourd (Luffa aegyptiaca). We found that bee diversity and abundance differed significantly among the studied plots, but only the bee species richness was positively related to the seed set. Functional group diversity in terms of pollen deposition explained even more of the variance in seed set (r 2  = 0.74) than did the species richness (r 2  = 0.53) making it the most important trait of bee species for predicting the crop reproductive success.

  2. Reef flattening effects on total richness and species responses in the Caribbean

    NARCIS (Netherlands)

    Newman, Steven P.; Meesters, E.H.; Dryden, Charlie S.; Williams, Stacey M.; Sanchez, Cristina; Mumby, Peter J.; Polunin, Nicholas V.C.

    2015-01-01

    There has been ongoing flattening of Caribbean coral reefs with the loss of habitat having severe implications for these systems. Complexity and its structural components are important to fish species richness and community composition, but little is known about its role for other taxa or

  3. Temporal-spatial dynamics in orthoptera in relation to nutrient availability and plant species richness.

    Directory of Open Access Journals (Sweden)

    Rob J J Hendriks

    Full Text Available Nutrient availability in ecosystems has increased dramatically over the last century. Excess reactive nitrogen deposition is known to negatively impact plant communities, e.g. by changing species composition, biomass and vegetation structure. In contrast, little is known on how such impacts propagate to higher trophic levels. To evaluate how nitrogen deposition affects plants and herbivore communities through time, we used extensive databases of spatially explicit historical records of Dutch plant species and Orthoptera (grasshoppers and crickets, a group of animals that are particularly susceptible to changes in the C:N ratio of their resources. We use robust methods that deal with the unstandardized nature of historical databases to test whether nitrogen deposition levels and plant richness changes influence the patterns of richness change of Orthoptera, taking into account Orthoptera species functional traits. Our findings show that effects indeed also propagate to higher trophic levels. Differences in functional traits affected the temporal-spatial dynamics of assemblages of Orthoptera. While nitrogen deposition affected plant diversity, contrary to our expectations, we could not find a strong significant effect of food related traits. However we found that species with low habitat specificity, limited dispersal capacity and egg deposition in the soil were more negativly affected by nitrogen deposition levels. Despite the lack of significant effect of plant richness or food related traits on Orthoptera, the negative effects of nitrogen detected within certain trait groups (e.g. groups with limited disperse ability could be related to subtle changes in plant abundance and plant quality. Our results, however, suggest that the changes in soil conditions (where many Orthoptera species lay their eggs or other habitat changes driven by nitrogen have a stronger influence than food related traits. To fully evaluate the negative effects of nitrogen

  4. Determinants of bird species richness, endemism, and island network roles in Wallacea and the West Indies

    DEFF Research Database (Denmark)

    Dalsgaard, Bo; Carstensen, Daniel Wisbech; Fjeldså, Jon

    2014-01-01

    , and network roles indicates that historical climate had little effects on extinction-immigration dynamics. This is in contrast to the strong effect of historical climate observed on the mainland, possibly because surrounding oceans buffer against strong climate oscillations and because geography is a strong....... Here, we evaluate the potential additional effects of historical climate on breeding land bird richness and endemism in Wallacea and the West Indies. Furthermore, on the basis of species distributions, we identify island biogeographical network roles and examine their association with geography......, current and historical climate, and bird richness/endemism. We found that island geography, especially island area but also isolation and elevation, largely explained the variation in island species richness and endemism. Current and historical climate only added marginally to our understanding...

  5. The incidence of Pyrenochaeta terrestris in root of different plant species in Serbia

    Directory of Open Access Journals (Sweden)

    Lević Jelena T.

    2013-01-01

    Full Text Available Root samples of cereals (oats, wheat, barley, maize and sorghum, vegetables (garlic, onion, pepper, cucumber, pumpkin, carrot and tomato, industrial plant (soya bean and weeds (Johnson grass, barnyard grass and green bristle-grass collected in different agroecological conditions in Serbia were analysed for the presence of Pyrenochaeta terrestris. The fungus was found in 42 out of 51 samples (82.4%, while the incidence varied from 2.5 to 72.5%. The highest incidence was detected in cereals (average 30.3%, and then in weeds of the Poaceae family (average 14.2%. Considering single species, maize (up to 72.5% in root and Johnson grass (up to 37.5% were mostly attacked by this fungus. The lowest incidence of the fungus was determined in vegetable crops (average 6.7%. Red to reddish discoloration of root was correlated with the incidence of the fungus. Obtained data indicate that P. terrestris is widespread in Serbia and conditions for its development are favourable. [Projekat Ministarstva nauke Republike Srbije, br. TR-31023

  6. Restoration of species-rich grasslands on ex-arable land: Seed addition outweighs soil fertility reduction

    NARCIS (Netherlands)

    Kardol, P.; Van der Wal, A.; Bezemer, T.M.; De Boer, W.; Duyts, H.; Holtkamp, R.; Van der Putten, W.H.

    2008-01-01

    A common practice in biodiversity conservation is restoration of former species-rich grassland on ex-arable land. Major constraints for grassland restoration are high soil fertility and limited dispersal ability of plant species to target sites. Usually, studies focus on soil fertility or on methods

  7. Effects of habitat and landscape characteristics on medium and large mammal species richness and composition in northern Uruguay

    Directory of Open Access Journals (Sweden)

    María José Andrade-Núñez

    2010-01-01

    Full Text Available The increasing world population and demand for food and other products has accelerated the conversion of natural habitats into agricultural lands, plantations and urban areas. Changes in habitat and landscape characteristics due to land-use change can have a significant effect on species presence, abundance, and distribution. Multi-scale approaches have been used to determine the proper spatial scales at which species and communities are responding to habitat transformation. In this context, we evaluated medium and large mammal species richness and composition in gallery forest (n = 10, grassland (n = 10, and exotic tree plantation (n = 10 in a region where grasslands have been converted into exotic tree plantations. We quantified mammal species richness and composition with camera traps and track surveys. The composition of the mammal community was related with local habitat variables, and landscape variables measured at seven spatial scales. We found 14 mammal species in forest, 11 species in plantation, and 7 mammal species in grassland. Two species are exotics, the wild boar Sus scrofa Linnaeus, 1758 and the European hare Lepus europaeus Pallas, 1778. The most common species are the crab-eating fox Cerdocyon thous Linnaeus, 1766, the nine-banded armadillo Dasypus novemcinctus Linnaeus, 1758 and the gray brocket deer Mazama gouazoubira G. Fischer, 1814 which are generalist species. Our results showed significant differences in mammal species richness and composition among the three habitat types. Plantations can have positive and negative effects on the presence of species restricted to grasslands. Positive effects are reflected in a wider local distribution of some forest species that rarely use grassland. The most important habitat and landscape variables that influenced mammal species richness and composition were vertical structure index, canopy cover, tree species diversity, percentage of grass, and the percentage of forest and grassland

  8. Does plant species richness guarantee the resilience of local medical systems? A perspective from utilitarian redundancy.

    Directory of Open Access Journals (Sweden)

    Flávia Rosa Santoro

    Full Text Available Resilience is related to the ability of a system to adjust to disturbances. The Utilitarian Redundancy Model has emerged as a tool for investigating the resilience of local medical systems. The model determines the use of species richness for the same therapeutic function as a facilitator of the maintenance of these systems. However, predictions generated from this model have not yet been tested, and a lack of variables exists for deeper analyses of resilience. This study aims to address gaps in the Utilitarian Redundancy Model and to investigate the resilience of two medical systems in the Brazilian semi-arid zone. As a local illness is not always perceived in the same way that biomedicine recognizes, the term "therapeutic targets" is used for perceived illnesses. Semi-structured interviews with local experts were conducted using the free-listing technique to collect data on known medicinal plants, usage preferences, use of redundant species, characteristics of therapeutic targets, and the perceived severity for each target. Additionally, participatory workshops were conducted to determine the frequency of targets. The medical systems showed high species richness but low levels of species redundancy. However, if redundancy was present, it was the primary factor responsible for the maintenance of system functions. Species richness was positively associated with therapeutic target frequencies and negatively related to target severity. Moreover, information about redundant species seems to be largely idiosyncratic; this finding raises questions about the importance of redundancy for resilience. We stress the Utilitarian Redundancy Model as an interesting tool to be used in studies of resilience, but we emphasize that it must consider the distribution of redundancy in terms of the treatment of important illnesses and the sharing of information. This study has identified aspects of the higher and lower vulnerabilities of medical systems, adding

  9. Aligning conservation goals: are patterns of species richness and endemism concordant at regional scales?

    Directory of Open Access Journals (Sweden)

    Ricketts, T. H.

    2001-01-01

    Full Text Available Biodiversity conservation strategies commonly target areas of high species richness and/or high endemism. However, the correlation between richness and endemism at scales relevant to conservation is unclear; these two common goals of conservation plans may therefore be in conflict. Here the spatial concordance between richness and endemism is tested using five taxa in North America: butterflies, birds, mammals, amphibians, and reptiles. This concordance is also tested using overall indices of richness and endemism (incorporating all five taxa. For all taxa except birds, richness and endemism were significantly correlated, with amphibians, reptiles, and the overall indices showing the highest correlations (rs = 0.527-0.676. However, 'priority sets' of ecoregions (i.e., the top 10% of ecoregions based on richness generally overlapped poorly with those based on endemism (< 50% overlap for all but reptiles. These results offer only limited support for the idea that richness and endemism are correlated at broad scales and indicate that land managers will need to balance these dual, and often conflicting, goals of biodiversity conservation.

  10. Mosquitoes of the Caatinga: 2. Species from periodic sampling of bromeliads and tree holes in a dry Brazilian forest.

    Science.gov (United States)

    Marteis, Letícia Silva; Natal, Delsio; Sallum, Maria Anice Mureb; Medeiros-Sousa, Antônio Ralph; Corte, Roseli La

    2017-07-01

    The Caatinga is a dry tropical forest, located in the Brazilian semiarid region and rich in phytotelmata. This study investigated the culicid fauna of phytotelmata of the caatinga by sampling for 19 consecutive months aquatic immatures from tree holes and bromeliads. A total of 127L of water was taken from the plants, containing 6764 immature culicids of 16 species, of which 11 (69%) are undescribed and respond to 90% of the total abundance of the specimens collected. Epiphytic bromeliads harbor a large number of immature Culicidae, although terrestrial bromeliads are the most abundant and widely distributed in the region. The richness of culicid species was similar between terrestrial and epiphytic bromeliads and lower in habitats represented by tree hole phytotelmata. There was no similarity in the composition of culicid species that developed in bromeliads or tree holes. Temperature and humidity were the environmental parameters most strongly associated with the proportion of positive plants. The Caatinga has a great number of endemic species that remain unknown to science and many additional culicid species may await discovery from there. Copyright © 2017 Elsevier B.V. All rights reserved.

  11. Species Richness and Phenology of Cerambycid Beetles in Urban Forest Fragments of Northern Delaware

    Science.gov (United States)

    K. Handley; J. Hough-Goldstein; L.M. Hanks; J.G. Millar; V. D' amico

    2015-01-01

    Cerambycid beetles are abundant and diverse in forests, but much about their host relationships and adult behavior remains unknown. Generic blends of synthetic pheromones were used as lures in traps, to assess the species richness, and phenology of cerambycids in forest fragments in northern Delaware. More than 15,000 cerambycid beetles of 69 species were trapped over...

  12. [Terrestrial flora of Malpelo Island, Colombia, Eastern Tropical Pacific].

    Science.gov (United States)

    González-Román, Rubén D; López-Victoria, Mateo; Silverstone-Sopkin, Philip A

    2014-03-01

    Malpelo Island is located 380km off the mainland continental coast of Colombia, in the Pacific Ocean. Several geological, ecological, and zoological studies, both marine and terrestrial, have been conducted in this island. Despite some marginal comments on some publications, no single specific survey has been devoted to botany so far. In order to make a floristic inventory of the terrestrial flora of this island, three field trips were made in 2010 to collect vascular plants, mosses, and lichens, as well as data on their distribution within the island. We collected and identified 25 species of lichens, two species of vascular plants and one moss. Lichens were the most diverse group found, including records of four new genera (Endocarpon, Fuscidea, Lecanographa and Verrucaria) and 13 new species for Colombia. The high lichen richness on Malpelo might be explained by their efficient form of asexual reproduction (soredia and isidia), that may have facilitated their transport to the island by migrating birds or wind. Once on the island, it is possible that lichens persist by being chemically protected against herbivores. The great number of new generic and species records for Colombia is explained by the low number of studies in saxicolous lichens conducted so far in the country, particularly on coastal areas and remote islands. Only two species of vascular plants were collected, a grass, Paspalum sp., and a fern, Pityrogramma calomelanos, and both of them correspond to new determinations for Malpelo. A moss species previously reported but with no positive identification was collected and identified as Octoblepharum albidum. Other species previously reported, for example, some species of shrubs, were not observed. The low number of vascular plants is probably due to a combination of soil conditions and herbivory by land crabs. This study is the first complete inventory of the flora of Malpelo and is a starting and reference point for future comparisons among islands in

  13. Elevational plant species richness patterns and their drivers across non-endemics, endemics and growth forms in the Eastern Himalaya.

    Science.gov (United States)

    Manish, Kumar; Pandit, Maharaj K; Telwala, Yasmeen; Nautiyal, Dinesh C; Koh, Lian Pin; Tiwari, Sudha

    2017-09-01

    Despite decades of research, ecologists continue to debate how spatial patterns of species richness arise across elevational gradients on the Earth. The equivocal results of these studies could emanate from variations in study design, sampling effort and data analysis. In this study, we demonstrate that the richness patterns of 2,781 (2,197 non-endemic and 584 endemic) angiosperm species along an elevational gradient of 300-5,300 m in the Eastern Himalaya are hump-shaped, spatial scale of extent (the proportion of elevational gradient studied) dependent and growth form specific. Endemics peaked at higher elevations than non-endemics across all growth forms (trees, shrubs, climbers, and herbs). Richness patterns were influenced by the proportional representation of the largest physiognomic group (herbs). We show that with increasing spatial scale of extent, the richness patterns change from a monotonic to a hump-shaped pattern and richness maxima shift toward higher elevations across all growth forms. Our investigations revealed that the combination of ambient energy (air temperature, solar radiation, and potential evapo-transpiration) and water availability (soil water content and precipitation) were the main drivers of elevational plant species richness patterns in the Himalaya. This study highlights the importance of factoring in endemism, growth forms, and spatial scale when investigating elevational gradients of plant species distributions and advances our understanding of how macroecological patterns arise.

  14. The relationship between species richness and ecosystem variability is shaped by the mechanism of coexistence.

    Science.gov (United States)

    Tredennick, Andrew T; Adler, Peter B; Adler, Frederick R

    2017-08-01

    Theory relating species richness to ecosystem variability typically ignores the potential for environmental variability to promote species coexistence. Failure to account for fluctuation-dependent coexistence may explain deviations from the expected negative diversity-ecosystem variability relationship, and limits our ability to predict the consequences of increases in environmental variability. We use a consumer-resource model to explore how coexistence via the temporal storage effect and relative nonlinearity affects ecosystem variability. We show that a positive, rather than negative, diversity-ecosystem variability relationship is possible when ecosystem function is sampled across a natural gradient in environmental variability and diversity. We also show how fluctuation-dependent coexistence can buffer ecosystem functioning against increasing environmental variability by promoting species richness and portfolio effects. Our work provides a general explanation for variation in observed diversity-ecosystem variability relationships and highlights the importance of conserving regional species pools to help buffer ecosystems against predicted increases in environmental variability. © 2017 John Wiley & Sons Ltd/CNRS.

  15. Species richness and origin of the bryophyte flora of the Colombian Andes

    NARCIS (Netherlands)

    Gradstein, S.R.; Reenen, van G.B.A.; Griffin, D.

    1988-01-01

    Based on data from the ECOANDES project, a phytogeographical analysis has been made of the bryophyte flora along the wet, foggy western slope (1000-4500 m) and the drier eastern slope (500-4500 m) of the Colombian Central Cordillera at the ‘Parque de los Nevados’. Species richness increases with

  16. Functional redundancy patterns reveal non-random assembly rules in a species-rich marine assemblage.

    Directory of Open Access Journals (Sweden)

    Nicolas Guillemot

    Full Text Available The relationship between species and the functional diversity of assemblages is fundamental in ecology because it contains key information on functional redundancy, and functionally redundant ecosystems are thought to be more resilient, resistant and stable. However, this relationship is poorly understood and undocumented for species-rich coastal marine ecosystems. Here, we used underwater visual censuses to examine the patterns of functional redundancy for one of the most diverse vertebrate assemblages, the coral reef fishes of New Caledonia, South Pacific. First, we found that the relationship between functional and species diversity displayed a non-asymptotic power-shaped curve, implying that rare functions and species mainly occur in highly diverse assemblages. Second, we showed that the distribution of species amongst possible functions was significantly different from a random distribution up to a threshold of ∼90 species/transect. Redundancy patterns for each function further revealed that some functions displayed fast rates of increase in redundancy at low species diversity, whereas others were only becoming redundant past a certain threshold. This suggested non-random assembly rules and the existence of some primordial functions that would need to be fulfilled in priority so that coral reef fish assemblages can gain a basic ecological structure. Last, we found little effect of habitat on the shape of the functional-species diversity relationship and on the redundancy of functions, although habitat is known to largely determine assemblage characteristics such as species composition, biomass, and abundance. Our study shows that low functional redundancy is characteristic of this highly diverse fish assemblage, and, therefore, that even species-rich ecosystems such as coral reefs may be vulnerable to the removal of a few keystone species.

  17. Managed forest landscape structure and avian species richness in the southeastern US

    Science.gov (United States)

    Craig Loehle; T. Bently Wigley; Scott Rutzmoser; John A. Gerwin; Patrick D. Keyser; Richard A. Lancia; Christopher J. Reynolds; Ronald E. Thill; Robert Weih; Don White; Petra Bohall Wood

    2005-01-01

    Forest structural features at the stand scale (e.g., snags, stem density, species composition) and habitat attributes at larger spatial scales (e.g., landscape pattern, road density) can influence biological diversity and have been proposed as indicators in sustainable forestry programs. This study investigated relationships between such factors and total richness of...

  18. Patterns in species richness and distribution of vascular epiphytes in Chiapas, Mexico

    NARCIS (Netherlands)

    Wolf, J.H.D.; Flamenco-S., A.

    2003-01-01

    Aim We aim to assess regional patterns in the distribution and species richness of vascular epiphytes with an emphasis on forests that differ in altitude and the amount of rainfall. Location Tropical America, in particularly the 75000 km2 large state of Chiapas in southern Mexico at 14.5-18.0º N.

  19. Terrain and vegetation structural influences on local avian species richness in two mixed-conifer forests

    Science.gov (United States)

    Jody C. Vogeler; Andrew T. Hudak; Lee A. Vierling; Jeffrey Evans; Patricia Green; Kerri T. Vierling

    2014-01-01

    Using remotely-sensed metrics to identify regions containing high animal diversity and/or specific animal species or guilds can help prioritize forest management and conservation objectives across actively managed landscapes. We predicted avian species richness in two mixed conifer forests, Moscow Mountain and Slate Creek, containing different management contexts and...

  20. Effects of 'target' plant species body size on neighbourhood species richness and composition in old-field vegetation.

    Directory of Open Access Journals (Sweden)

    Brandon S Schamp

    Full Text Available Competition is generally regarded as an important force in organizing the structure of vegetation, and evidence from several experimental studies of species mixtures suggests that larger mature plant size elicits a competitive advantage. However, these findings are at odds with the fact that large and small plant species generally coexist, and relatively smaller species are more common in virtually all plant communities. Here, we use replicates of ten relatively large old-field plant species to explore the competitive impact of target individual size on their surrounding neighbourhoods compared to nearby neighbourhoods of the same size that are not centred by a large target individual. While target individuals of the largest of our test species, Centaurea jacea L., had a strong impact on neighbouring species, in general, target species size was a weak predictor of the number of other resident species growing within its immediate neighbourhood, as well as the number of resident species that were reproductive. Thus, the presence of a large competitor did not restrict the ability of neighbouring species to reproduce. Lastly, target species size did not have any impact on the species size structure of neighbouring species; i.e. they did not restrict smaller, supposedly poorer competitors, from growing and reproducing close by. Taken together, these results provide no support for a size-advantage in competition restricting local species richness or the ability of small species to coexist and successfully reproduce in the immediate neighbourhood of a large species.

  1. A new terrestrial snail species (Gastropoda: Bulimulidae from the Región de Antofagasta, northern Chile

    Directory of Open Access Journals (Sweden)

    Juan Francisco Araya

    2017-07-01

    Full Text Available A new species of Scutalus Albers, 1850 (Gastropoda: Bulimulidae, Scutalus chango sp. n., is described from a coastal area of northern Chile. Empty shells of this new species were found buried in sand and under boulders and rocks in the foothills of the Chilean Coastal Range at Paposo, Región de Antofagasta. This new species is distinguished from all other Chilean terrestrial snails by its slender shell with a flared and reflected aperture, and by the presence of a columellar fold. This is the first record of Scutalus in Chile, and the southernmost record for this endemic South American bulimulid genus. The presence of this species in Paposo highlights the need for further research and for conservation guidelines in coastal areas of northern Chile, which have comparatively high levels of biodiversity and endemism.

  2. Rarity, Species Richness, and the Threat of Extinction—Are Plants the Same as Animals?

    OpenAIRE

    Knapp, Sandra

    2011-01-01

    Assessment of conservation status is done both for areas or habitats and for species (or taxa). IUCN Red List categories have been the principal method of categorising species in terms of extinction risk, and have been shown to be robust and helpful in the groups for which they have been developed. A recent study highlights properties associated with extinction risk in flowering plants, focusing on the species-rich hot spot of the Cape region of South Africa, and concludes that merely followi...

  3. Frog species richness, composition and beta-diversity in coastal Brazilian restinga habitats

    Directory of Open Access Journals (Sweden)

    CFD. Rocha

    Full Text Available We studied the species richness and composition of frogs in 10 restinga habitats (sand dune environments dominated by herbaceous and shrubby vegetation along approximately 1500 km of coastal areas of three Brazilian States: Rio de Janeiro (Grumari, Maricá, Massambaba, Jurubatiba and Grussaí, Espírito Santo (Praia das Neves and Setiba and Bahia (Prado and Trancoso. We estimated beta-diversity and similarity among areas and related these parameters to geographic distance between areas. All areas were surveyed with a similar sampling procedure. We found 28 frog species belonging to the families Hylidae, Microhylidae, Leptodactylidae and Bufonidae. Frogs in restingas were in general nocturnal with no strictly diurnal species. The richest restinga was Praia das Neves (13 species, followed by Grussaí and Trancoso (eight species in each. The commonest species in the restingas was Scinax alter (found in eight restingas, followed by Aparasphenodon brunoi (seven areas. Our data shows that richness and composition of frog communities vary consistently along the eastern Brazilian coast and, in part, the rate of species turnover is affected by the distance among areas. Geographic distance explained approximately 12% of species turnover in restingas and about 9.5% of similarity among frog assemblages. Although geographic distance somewhat affects frog assemblages, other factors (e.g. historical factors, disturbances seem to be also involved in explaining present frog assemblage composition in each area and species turnover among areas. The frog fauna along restinga habitats was significantly nested (matrix community temperature = 26.13°; p = 0.007. Our data also showed that the most hospitable restinga was Praia das Neves and indicated that this area should be protected as a conservation unit. Frog assemblage of each area seems to partially represent a nested subset of the original assemblage, although we should not ignore the importance of historical

  4. Comparison of saline tolerance among genetically similar species of Fusarium and Meloidogyne recovered from marine and terrestrial habitats

    Science.gov (United States)

    Elmer, W. H.; LaMondia, J. A.

    2014-08-01

    Successful plant pathogens co-evolve and adapt to the environmental constraints placed on host plants. We compared the salt tolerance of two salt marsh pathogens, Fusarium palustre and Meloidogyne spartinae, to genetically related terrestrial species, F. sporotrichioides and Meloidogyne hapla, to assess whether the salt marsh species had acquired selective traits for persisting in saline environments or if salt tolerance was comparable among Fusarium and Meloidogyne species. Comparisons of both species were made in vitro in vessels containing increasing concentration of NaCl. We observed that F. palustre was more tolerant to NaCl than F. sporotrichioides. The radial expansion of F. palustre on NaCl-amended agar plates was unaffected by increasing concentrations up to 0.3 M. F. sporotrichioides showed large reductions in growth at the same concentrations. Survival of M. hapla was greatest at 0 M, and reduced by half in a 0.3 M solution for 4 days. No juveniles survived exposure to 0.3 M NaCl for 12 days. M. spartinae survived at all NaCl concentrations tested, including 1.0 M for at least 12 days. These findings are consistent with the hypothesis that marine organisms in the upper tidal zone must osmoregulate to withstand a wide range of salinity and provide evidence that these pathogens evolved in saline conditions and are not recent introductions from terrestrial niches.

  5. Fish species richness is associated with the availability of landscape components across seasons in the Amazonian floodplain

    Directory of Open Access Journals (Sweden)

    Carlos Edwar Carvalho Freitas

    2018-06-01

    Full Text Available Understanding environmental biodiversity drivers in freshwater systems continues to be a fundamental challenge in studies of their fish assemblages. The present study seeks to determine the degree to which landscape variables of Amazonian floodplain lakes influences fish assemblages in these environments. Fish species richness was estimated in 15 Amazonian floodplain lakes during the high and low-water phases and correlated with the areas of four inundated wetland classes: (i open water, (ii flooded herbaceous, (iii flooded shrubs and (iv flooded forest estimated in different radius circular areas around each sampling site. Data were analyzed using generalized linear models with fish species richness, total and guilds as the dependent variable and estimates of buffered landscape areas as explanatory variables. Our analysis identified the significance of landscape variables in determining the diversity of fish assemblages in Amazonian floodplain lakes. Spatial scale was also identified as a significant determinant of fish diversity as landscape effects were more evident at larger spatial scales. In particular, (1 total species richness was more sensitive to variations in the landscape areas than number of species within guilds and (2 the spatial extent of the wetland class of shrubs was consistently the more influential on fish species diversity.

  6. The impact of land abandonment on species richness and abundance in the Mediterranean Basin

    DEFF Research Database (Denmark)

    Plieninger, Tobias; Hui, Cang; Gaertner, Mirijam

    2014-01-01

    species richness and abundance in agroforestry, arable land, pastures, and permanent crops of the Mediterranean Basin. In particular, we investigated (1) which taxonomic groups (arthropods, birds, lichen, vascular plants) are more affected by land abandonment; (2) at which spatial and temporal scales.......0001) plant and animal species richness and abundance overall, though results were heterogeneous, with differences in effect size between taxa, spatial-temporal scales, land uses, landforms, and climate. In conclusion, there is no "one-size-fits-all" conservation approach that applies to the diverse contexts......Land abandonment is common in the Mediterranean Basin, a global biodiversity hotspot, but little is known about its impacts on biodiversity. To upscale existing case-study insights to the Pan-Mediterranean level, we conducted a metaanalysis of the effects of land abandonment on plant and animal...

  7. Restinga forests of the Brazilian coast: richness and abundance of tree species on different soils.

    Science.gov (United States)

    Magnago, Luiz F S; Martins, Sebastião V; Schaefer, Carlos E G R; Neri, Andreza V

    2012-09-01

    The aim of this study was to determine changes in composition, abundance and richness of species along a forest gradient with varying soils and flood regimes. The forests are located on the left bank of the lower Jucu River, in Jacarenema Natural Municipal Park, Espírito Santo. A survey of shrub/tree species was done in 80 plots, 5x25 m, equally distributed among the forests studied. We included in the sampling all individuals with >3.2 cm diameter at breast height (1.30 m). Soil samples were collected from the surface layer (0-10 cm) in each plot for chemical and physical analysis. The results indicate that a significant pedological gradient occurs, which is influenced by varying seasonal groundwater levels. Restinga forest formations showed significant differences in species richness, except for Non-flooded Forest and Non-flooded Forest Transition. The Canonical Correlation Analysis (CCA) showed that some species are distributed along the gradient under the combined influence of drainage, nutrient concentration and physical characteristics of the soil. Regarding the variables tested, flooding seems to be a more limiting factor for the establishment of plant species in Restinga forests than basic soil fertility attributes.

  8. Blackflies (Diptera: Simuliidae) in Croatia: species richness, distribution and relationship to surrounding countries.

    Science.gov (United States)

    Ivković, Marija; Kúdela, Matuš; Kúdelová, Tatiana

    2016-05-05

    All records of blackflies (Simuliidae) from the territory of Croatia are summarized, including previously unpublished data. The blackfly fauna of Croatia consists of 28 species. Simulium (Nevermannia) angustitarse (Lundström), Simulium (Nevermannia) cryophilum (Rubtsov) complex, Simulium (Nevermannia) lundstromi (Enderlein), Simulium (Nevermannia) vernum Macquart complex, Simulium (Simulium) argyreatum Meigen, Simulium (Simulium) bezzii (Corti) complex, Simulium paraequinum Puri and Simulium pseudequinum Séguy are reported for the first time from Croatia. Information related to the ecoregions, in which species were found and specific species traits are given. Genus Prosimulium Roubaud is represented by one species only. Genus Simulium Latreille is represented by 27 species in six subgenera, with subgenus Simulium Latreille s. str. being most species rich (13 species) and subgenera Boophthora Enderlein and  Trichodagmia Enderlein represented each by only one species. Compared to the neighboring countries, the Croatian species assemblage is most similar to the fauna of Slovenia and least similar to that of Italy. The relatively low number of species, presence of several species complexes and unclear identity of other species show that further research of blackflies in Croatia is needed.

  9. Limno-terrestrial Tardigrada of the Nearctic Realm

    Directory of Open Access Journals (Sweden)

    Juliana G. HINTON

    2007-09-01

    Full Text Available We examined all available records of limno-terrestrial tardigrade distribution in the Nearctic realm (Greenland, Canada, Alaska, the continental United States of America, and northern Mexico, both to compare this fauna with other realms and to investigate distribution within North America. We included only those records in which tardigrades had been identified to species. Of 204 Nearctic limno-terrestrial tardigrade species, 38 were cosmopolitan, while 55 were unique to the Nearctic realm. The Nearctic tardigrade fauna is most similar to the Palearctic, with 135 species in common, 39 of which have not been reported elsewhere. The Nearctic realm shares 82 species with the Neotropical realm, only 10 which are not also Palearctic. These data are consistent with the geological history of the three realms, and indicate a distinction between Laurasian and Gondwanan tardigrade faunas. Although little is known about limno-terrestrial tardigrade distribution in much of North America, there are several excellent regional or local surveys. Many species are distributed widely throughout the continent, but 30.0% of Nearctic species have been reported from a single site. Cluster analysis of the fauna of 11 Nearctic regions shows that the Arctic and sub-Arctic fauna constitute a regional fauna distinct from the rest of the continent. Ecological analysis is hampered by inconsistent reporting of tardigrade substrate, though available data suggest little substrate specificity in terrestrial tardigrades. Most species are found in both mosses and lichens. Many are also present in soil and leaf litter, but few are found only in these substrates.

  10. Terrestrial forest management plan for Palmyra Atoll

    Science.gov (United States)

    Hathaway, Stacie A.; McEachern, Kathryn; Fisher, Robert N.

    2011-01-01

    This 'Terrestrial Forest Management Plan for Palmyra Atoll' was developed by the U.S. Geological Survey (USGS) for The Nature Conservancy (TNC) Palmyra Program to refine and expand goals and objectives developed through the Conservation Action Plan process. It is one in a series of adaptive management plans designed to achieve TNC's mission toward the protection and enhancement of native wildlife and habitat. The 'Terrestrial Forest Management Plan for Palmyra Atoll' focuses on ecosystem integrity and specifically identifies and addresses issues related to assessing the status and distribution of resources, as well as the pressures acting upon them, most specifically nonnative and potentially invasive species. The plan, which presents strategies for increasing ecosystem integrity, provides a framework to implement and track the progress of conservation and restoration goals related to terrestrial resources on Palmyra Atoll. The report in its present form is intended to be an overview of what is known about historical and current forest resources; it is not an exhaustive review of all available literature relevant to forest management but an attempt to assemble as much information specific to Palmyra Atoll as possible. Palmyra Atoll is one of the Northern Line Islands in the Pacific Ocean southwest of the Hawai`ian Islands. It consists of many heavily vegetated islets arranged in a horseshoe pattern around four lagoons and surrounded by a coral reef. The terrestrial ecosystem consists of three primary native vegetation types: Pisonia grandis forest, coastal strand forest, and grassland. Among these vegetation types, the health and extent of Pisonia grandis forest is of particular concern. Overall, the three vegetation types support 25 native plant species (two of which may be extirpated), 14 species of sea birds, six shore birds, at least one native reptile, at least seven native insects, and six native land crabs. Green and hawksbill turtles forage at Palmyra Atoll

  11. Effectiveness of turf stripping as a measure for restoring species-rich fen meadows in suboptimal hydrological conditions

    NARCIS (Netherlands)

    Hoek, van der D.; Heijmans, M.M.P.D.

    2007-01-01

    Most species-rich fen meadows in nature reserves in The Netherlands are acidified due to weaker upwelling of base-rich groundwater. The present study investigated whether and why turf stripping combined with superficial drainage might promote the long-term recovery of such meadows and restore the

  12. Contaminant exposure in terrestrial vertebrates

    International Nuclear Information System (INIS)

    Smith, Philip N.; Cobb, George P.; Godard-Codding, Celine; Hoff, Dale; McMurry, Scott T.; Rainwater, Thomas R.; Reynolds, Kevin D.

    2007-01-01

    Here we review mechanisms and factors influencing contaminant exposure among terrestrial vertebrate wildlife. There exists a complex mixture of biotic and abiotic factors that dictate potential for contaminant exposure among terrestrial and semi-terrestrial vertebrates. Chemical fate and transport in the environment determine contaminant bioaccessibility. Species-specific natural history characteristics and behavioral traits then play significant roles in the likelihood that exposure pathways, from source to receptor, are complete. Detailed knowledge of natural history traits of receptors considered in conjunction with the knowledge of contaminant behavior and distribution on a site are critical when assessing and quantifying exposure. We review limitations in our understanding of elements of exposure and the unique aspects of exposure associated with terrestrial and semi-terrestrial taxa. We provide insight on taxa-specific traits that contribute, or limit exposure to, transport phenomenon that influence exposure throughout terrestrial systems, novel contaminants, bioavailability, exposure data analysis, and uncertainty associated with exposure in wildlife risk assessments. Lastly, we identify areas related to exposure among terrestrial and semi-terrestrial organisms that warrant additional research. - Both biotic and abiotic factors determine chemical exposure for terrestrial vertebrates

  13. FEATURES OF THE GEOGRAPHICAL DISTRIBUTION OF TERRESTRIAL MOLLUSCS IN THE CAUCASUS

    Directory of Open Access Journals (Sweden)

    M. Z. Magomedova

    2015-01-01

    Full Text Available Aim. High population, high proliferation rates, a large species diversity, low mobility and small ability to overcome geographic barriers, ease of collecting material and sensitive response to changes in the external environment makes this group a convenient object of biogeographic and ecological research. Methods. The inventory of Caucasian ground malacofauna made it possible to make a complete list of species; their characteristics were determined by the geographical distribution of major natural regions of the Caucasus. Results. The comparative analysis of the geographical distribution of terrestrial molluscs on key areas of the Caucasus showed that among the 352 species belonging to 140 genera of 36 families, most richly represented Western Caucasus, which accounts for 51% or 181 species from 80 genera of 20 families, while the share of Armenian, Eastern and Central Caucasus accounts for 35-37%. Talysh, in turn, is characterized by the presence of only 11% of the species composition of the Caucasian land mollusc. Caucasus limited in distribution among the analyzed species is 72% or 255 species belonging to 104 genera of 24 families. Conclusion. The results prove the species diversity of the different regions of theCaucasus and could serve as the basis to reconsider the possible ways of formation of fauna of the region discussed. 

  14. Adaptation of benthic invertebrates to food sources along marine-terrestrial boundaries as indicated by carbon and nitrogen stable isotopes

    Science.gov (United States)

    Lange, G.; Haynert, K.; Dinter, T.; Scheu, S.; Kröncke, I.

    2018-01-01

    Frequent environmental changes and abiotic gradients of the Wadden Sea require appropriate adaptations of the local organisms and make it suitable for investigations on functional structure of macrozoobenthic communities from marine to terrestrial boundaries. To investigate community patterns and food use of the macrozoobenthos, a transect of 11 stations was sampled for species number, abundance and stable isotope values (δ13C and δ15N) of macrozoobenthos and for stable isotope values of potential food resources. The transect was located in the back-barrier system of the island of Spiekeroog (southern North Sea, Germany). Our results show that surface and subsurface deposit feeders, such as Peringia ulvae and different oligochaete species, dominated the community, which was poor in species, while species present at the transect stations reached high abundance. The only exception was the upper salt marsh with low abundances but higher species richness because of the presence of specialized semi-terrestrial and terrestrial taxa. The macrozoobenthos relied predominantly on marine resources irrespective of the locality in the intertidal zone, although δ13C values of the consumers decreased from - 14.1 ± 1.6‰ (tidal flats) to - 21.5 ± 2.4‰ (salt marsh). However, the ubiquitous polychaete Hediste diversicolor showed a δ15N enrichment of 2.8‰ (an increase of about one trophic level) from bare sediments to the first vegetated transect station, presumably due to switching from suspension or deposit feeding to predation on smaller invertebrates. Hence, we conclude that changes in feeding mode represent an important mechanism of adaptation to different Wadden Sea habitats.

  15. Contrasting Holocene environmental histories may explain patterns of species richness and rarity in a Central European landscape

    Czech Academy of Sciences Publication Activity Database

    Hájek, M.; Dudová, Lydie; Hájková, Petra; Roleček, Jan; Moutelíková, J.; Jamrichová, Eva; Horsák, M.

    2016-01-01

    Roč. 133, FEB 1 2016 (2016), s. 48-61 ISSN 0277-3791 Institutional support: RVO:67985939 Keywords : species pool * extreme species richness * biogeography * Carpathians * palaeoecology Subject RIV: EH - Ecology, Behaviour Impact factor: 4.797, year: 2016

  16. An improved nonparametric lower bound of species richness via a modified good-turing frequency formula.

    Science.gov (United States)

    Chiu, Chun-Huo; Wang, Yi-Ting; Walther, Bruno A; Chao, Anne

    2014-09-01

    It is difficult to accurately estimate species richness if there are many almost undetectable species in a hyper-diverse community. Practically, an accurate lower bound for species richness is preferable to an inaccurate point estimator. The traditional nonparametric lower bound developed by Chao (1984, Scandinavian Journal of Statistics 11, 265-270) for individual-based abundance data uses only the information on the rarest species (the numbers of singletons and doubletons) to estimate the number of undetected species in samples. Applying a modified Good-Turing frequency formula, we derive an approximate formula for the first-order bias of this traditional lower bound. The approximate bias is estimated by using additional information (namely, the numbers of tripletons and quadrupletons). This approximate bias can be corrected, and an improved lower bound is thus obtained. The proposed lower bound is nonparametric in the sense that it is universally valid for any species abundance distribution. A similar type of improved lower bound can be derived for incidence data. We test our proposed lower bounds on simulated data sets generated from various species abundance models. Simulation results show that the proposed lower bounds always reduce bias over the traditional lower bounds and improve accuracy (as measured by mean squared error) when the heterogeneity of species abundances is relatively high. We also apply the proposed new lower bounds to real data for illustration and for comparisons with previously developed estimators. © 2014, The International Biometric Society.

  17. Is Variety the Spice of Life? An Experimental Investigation into the Effects of Species Richness on Self-Reported Mental Well-Being

    Science.gov (United States)

    zu Ermgassen, Sophus; Balmford, Andrew; White, Mathew; Weinstein, Netta

    2017-01-01

    Losses in biodiversity and trends toward urbanisation have reduced people’s contact with biodiverse nature, yet the consequences for mental well-being are not well understood. Here, we demonstrate that greater plant and animal species richness in isolation causes an improvement in mental well-being. To do so, the present research experimentally manipulated species richness and assessed widely-used indicators of mental well-being. Participants viewed short videos of either high or low tree (Study 1) or bird (Study 2) species richness and reported on positive (i.e., vitality, positive affect) and negative (i.e., anxiety) indicators of mental well-being. Building on Study 1, Study 2 included an urban environment as a reference treatment and explored the role of giving participants information on the presented environment. We find that, in line with expectations, watching videos containing greater species richness consistently leads to higher mental well-being. We discuss findings in light of the importance of connecting people to biodiverse environments. PMID:28107417

  18. Is Variety the Spice of Life? An Experimental Investigation into the Effects of Species Richness on Self-Reported Mental Well-Being.

    Directory of Open Access Journals (Sweden)

    Lukas J Wolf

    Full Text Available Losses in biodiversity and trends toward urbanisation have reduced people's contact with biodiverse nature, yet the consequences for mental well-being are not well understood. Here, we demonstrate that greater plant and animal species richness in isolation causes an improvement in mental well-being. To do so, the present research experimentally manipulated species richness and assessed widely-used indicators of mental well-being. Participants viewed short videos of either high or low tree (Study 1 or bird (Study 2 species richness and reported on positive (i.e., vitality, positive affect and negative (i.e., anxiety indicators of mental well-being. Building on Study 1, Study 2 included an urban environment as a reference treatment and explored the role of giving participants information on the presented environment. We find that, in line with expectations, watching videos containing greater species richness consistently leads to higher mental well-being. We discuss findings in light of the importance of connecting people to biodiverse environments.

  19. Species richness and trait composition of butterfly assemblages change along an altitudinal gradient.

    Science.gov (United States)

    Leingärtner, Annette; Krauss, Jochen; Steffan-Dewenter, Ingolf

    2014-06-01

    Species richness patterns along altitudinal gradients are well-documented ecological phenomena, yet very little data are available on how environmental filtering processes influence the composition and traits of butterfly assemblages at high altitudes. We have studied the diversity patterns of butterfly species at 34 sites along an altitudinal gradient ranging from 600 to 2,000 m a.s.l. in the National Park Berchtesgaden (Germany) and analysed traits of butterfly assemblages associated with dispersal capacity, reproductive strategies and developmental time from lowlands to highlands, including phylogenetic analyses. We found a linear decline in butterfly species richness along the altitudinal gradient, but the phylogenetic relatedness of the butterfly assemblages did not increase with altitude. Compared to butterfly assemblages at lower altitudes, those at higher altitudes were composed of species with larger wings (on average 9%) which laid an average of 68% more eggs. In contrast, egg maturation time in butterfly assemblages decreased by about 22% along the altitudinal gradient. Further, butterfly assemblages at higher altitudes were increasingly dominated by less widespread species. Based on our abundance data, but not on data in the literature, population density increased with altitude, suggesting a reversed density-distribution relationship, with higher population densities of habitat specialists in harsh environments. In conclusion, our data provide evidence for significant shifts in the composition of butterfly assemblages and for the dominance of different traits along the altitudinal gradient. In our study, these changes were mainly driven by environmental factors, whereas phylogenetic filtering played a minor role along the studied altitudinal range.

  20. The regional species richness and genetic diversity of Arctic vegetation reflect both past glaciations and current climate

    DEFF Research Database (Denmark)

    Stewart, L.; Alsos, Inger G.; Bay, Christian

    2016-01-01

    Aim The Arctic has experienced marked climatic differences between glacial and interglacial periods and is now subject to a rapidly warming climate. Knowledge of the effects of historical processes on current patterns of diversity may aid predictions of the responses of vegetation to future climate...... species richness of the vascular plant flora of 21 floristic provinces and examined local species richness in 6215 vegetation plots distributed across the Arctic. We assessed levels of genetic diversity inferred from amplified fragment length polymorphism variation across populations of 23 common Arctic...... size compared to the models of bryophyte and lichen richness. Main conclusion Our study suggests that imprints of past glaciations in Arctic vegetation diversity patterns at the regional scale are still detectable today. Since Arctic vegetation is still limited by post-glacial migration lag...

  1. Scleractinian species richness for Florida Keys National Marine Sanctuary from 1996-2012 (NODC Accession 0123059)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset contains records of scleractinian species richness compiled from multiple sources. These are: CREMP, SCREAM, AGRRA, and FRRP CREMP: Coral Reef...

  2. Terrestrial ecosystems and biodiversity

    CSIR Research Space (South Africa)

    Davis-Reddy, Claire

    2017-10-01

    Full Text Available Ecoregions Terrestrial Biomes Protected Areas Climate Risk and Vulnerability: A Handbook for Southern Africa | 75 7.2. Non-climatic drivers of ecosystem change 7.2.1. Land-use change, habitat loss and fragmentation Land-use change and landscape... concentrations of endemic plant and animal species, but these mainly occur in areas that are most threatened by human activity. Diverse terrestrial ecosystems in the region include tropical and sub-tropical forests, deserts, savannas, grasslands, mangroves...

  3. Does tree species richness attenuate the effect of experimental irrigation and drought on decomposition rate in young plantation forests?

    Science.gov (United States)

    Masudur Rahman, Md; Verheyen, Kris; Castagneyrol, Bastien; Jactel, Hervé; Carnol, Monique

    2017-04-01

    Expected changes in precipitation in Europe due to climate change are likely to affect soil organic matter (OM) transformation. In forests, increasing tree species diversity might modulate the effect of changed precipitation. We evaluated the effect of tree species richness on the decomposition and stabilization rate in combination with reduced precipitation (FORBIO, Belgium) and irrigation treatment (ORPHEE, southern France) in young (6-8 yr.) experimental plantations. The species richness were one to four in FORBIO and one to five in ORPHEE. Twenty four rainout shelters of 3 m × 3 m were built around oak and beech trees in FORBIO plantation to impose a reduced precipitation treatment, whereas four of the eight blocks (175 m×100 m) in ORPHEE plantation was subjected to irrigation treatment. These treatments resulted in about 4% less soil moisture in FORBIO and about 7% higher soil moisture in ORPHEE compared to control. Commercially available green and rooibos tea bags were buried in the soil at 5-7 cm depth to measure two decomposition indices, known as 'tea bag index' (TBI). These TBI are (i) decomposition rate (k) and (ii) stabilization rate (S). The results showed no species richness effect on TBI indices in both reduced precipitation and irrigation treatment. In FORBIO, reduced precipitation resulted in decreased k and increased S compared to control around the beech trees only. In ORPHEE, both k and S were higher in the irrigation treatment compared to control. Overall, TBI indices were higher in FORBIO than ORPHEE and this might be explained by the sandy soils and poor nutrient content at the ORPHEE site. These results suggest that OM decomposition rate may be slower in drier condition and OM stabilization rate may be slower or faster in drier condition, depending on the site quality. The absence of tree species effects on OM transformation indicates that tree species richness would not be able to modulate the effects of changed precipitation patterns in

  4. Response of Plant Height, Species Richness and Aboveground Biomass to Flooding Gradient along Vegetation Zones in Floodplain Wetlands, Northeast China.

    Science.gov (United States)

    Lou, Yanjing; Pan, Yanwen; Gao, Chuanyu; Jiang, Ming; Lu, Xianguo; Xu, Y Jun

    2016-01-01

    Flooding regime changes resulting from natural and human activity have been projected to affect wetland plant community structures and functions. It is therefore important to conduct investigations across a range of flooding gradients to assess the impact of flooding depth on wetland vegetation. We conducted this study to identify the pattern of plant height, species richness and aboveground biomass variation along the flooding gradient in floodplain wetlands located in Northeast China. We found that the response of dominant species height to the flooding gradient depends on specific species, i.e., a quadratic response for Carex lasiocarpa, a negative correlation for Calamagrostis angustifolia, and no response for Carex appendiculata. Species richness showed an intermediate effect along the vegetation zone from marsh to wet meadow while aboveground biomass increased. When the communities were analysed separately, only the water table depth had significant impact on species richness for two Carex communities and no variable for C. angustifolia community, while height of dominant species influenced aboveground biomass. When the three above-mentioned communities were grouped together, variations in species richness were mainly determined by community type, water table depth and community mean height, while variations in aboveground biomass were driven by community type and the height of dominant species. These findings indicate that if habitat drying of these herbaceous wetlands in this region continues, then two Carex marshes would be replaced gradually by C. angustifolia wet meadow in the near future. This will lead to a reduction in biodiversity and an increase in productivity and carbon budget. Meanwhile, functional traits must be considered, and should be a focus of attention in future studies on the species diversity and ecosystem function in this region.

  5. Modelling patterns of pollinator species richness and diversity using satellite image texture.

    Directory of Open Access Journals (Sweden)

    Sylvia Hofmann

    Full Text Available Assessing species richness and diversity on the basis of standardised field sampling effort represents a cost- and time-consuming method. Satellite remote sensing (RS can help overcome these limitations because it facilitates the collection of larger amounts of spatial data using cost-effective techniques. RS information is hence increasingly analysed to model biodiversity across space and time. Here, we focus on image texture measures as a proxy for spatial habitat heterogeneity, which has been recognized as an important determinant of species distributions and diversity. Using bee monitoring data of four years (2010-2013 from six 4 × 4 km field sites across Central Germany and a multimodel inference approach we test the ability of texture features derived from Landsat-TM imagery to model local pollinator biodiversity. Textures were shown to reflect patterns of bee diversity and species richness to some extent, with the first-order entropy texture and terrain roughness being the most relevant indicators. However, the texture measurements accounted for only 3-5% of up to 60% of the variability that was explained by our final models, although the results are largely consistent across different species groups (bumble bees, solitary bees. While our findings provide indications in support of the applicability of satellite imagery textures for modeling patterns of bee biodiversity, they are inconsistent with the high predictive power of texture metrics reported in previous studies for avian biodiversity. We assume that our texture data captured mainly heterogeneity resulting from landscape configuration, which might be functionally less important for wild bees than compositional diversity of plant communities. Our study also highlights the substantial variability among taxa in the applicability of texture metrics for modelling biodiversity.

  6. Modelling patterns of pollinator species richness and diversity using satellite image texture.

    Science.gov (United States)

    Hofmann, Sylvia; Everaars, Jeroen; Schweiger, Oliver; Frenzel, Mark; Bannehr, Lutz; Cord, Anna F

    2017-01-01

    Assessing species richness and diversity on the basis of standardised field sampling effort represents a cost- and time-consuming method. Satellite remote sensing (RS) can help overcome these limitations because it facilitates the collection of larger amounts of spatial data using cost-effective techniques. RS information is hence increasingly analysed to model biodiversity across space and time. Here, we focus on image texture measures as a proxy for spatial habitat heterogeneity, which has been recognized as an important determinant of species distributions and diversity. Using bee monitoring data of four years (2010-2013) from six 4 × 4 km field sites across Central Germany and a multimodel inference approach we test the ability of texture features derived from Landsat-TM imagery to model local pollinator biodiversity. Textures were shown to reflect patterns of bee diversity and species richness to some extent, with the first-order entropy texture and terrain roughness being the most relevant indicators. However, the texture measurements accounted for only 3-5% of up to 60% of the variability that was explained by our final models, although the results are largely consistent across different species groups (bumble bees, solitary bees). While our findings provide indications in support of the applicability of satellite imagery textures for modeling patterns of bee biodiversity, they are inconsistent with the high predictive power of texture metrics reported in previous studies for avian biodiversity. We assume that our texture data captured mainly heterogeneity resulting from landscape configuration, which might be functionally less important for wild bees than compositional diversity of plant communities. Our study also highlights the substantial variability among taxa in the applicability of texture metrics for modelling biodiversity.

  7. Changes in biomass allocation in species rich meadow after abandonment: Ecological strategy or allometry?

    Czech Academy of Sciences Publication Activity Database

    Bartušková, Alena; Doležal, Jiří; Janeček, Štěpán; Lanta, V.; Klimešová, Jitka

    2015-01-01

    Roč. 17, č. 5 (2015), s. 379-387 ISSN 1433-8319 R&D Projects: GA ČR GB14-36079G Institutional support: RVO:67985939 Keywords : Biomass allocation * species-rich meadow * abandonment Subject RIV: EF - Botanics Impact factor: 3.578, year: 2015

  8. Visual search for tropical web spiders: the influence of plot length, sampling effort, and phase of the day on species richness.

    Science.gov (United States)

    Pinto-Leite, C M; Rocha, P L B

    2012-12-01

    Empirical studies using visual search methods to investigate spider communities were conducted with different sampling protocols, including a variety of plot sizes, sampling efforts, and diurnal periods for sampling. We sampled 11 plots ranging in size from 5 by 10 m to 5 by 60 m. In each plot, we computed the total number of species detected every 10 min during 1 hr during the daytime and during the nighttime (0630 hours to 1100 hours, both a.m. and p.m.). We measured the influence of time effort on the measurement of species richness by comparing the curves produced by sample-based rarefaction and species richness estimation (first-order jackknife). We used a general linear model with repeated measures to assess whether the phase of the day during which sampling occurred and the differences in the plot lengths influenced the number of species observed and the number of species estimated. To measure the differences in species composition between the phases of the day, we used a multiresponse permutation procedure and a graphical representation based on nonmetric multidimensional scaling. After 50 min of sampling, we noted a decreased rate of species accumulation and a tendency of the estimated richness curves to reach an asymptote. We did not detect an effect of plot size on the number of species sampled. However, differences in observed species richness and species composition were found between phases of the day. Based on these results, we propose guidelines for visual search for tropical web spiders.

  9. Post-fire salvage logging alters species composition and reduces cover, richness, and diversity in Mediterranean plant communities.

    Science.gov (United States)

    Leverkus, Alexandro B; Lorite, Juan; Navarro, Francisco B; Sánchez-Cañete, Enrique P; Castro, Jorge

    2014-01-15

    An intense debate exists on the effects of post-fire salvage logging on plant community regeneration, but scant data are available derived from experimental studies. We analyzed the effects of salvage logging on plant community regeneration in terms of species richness, diversity, cover, and composition by experimentally managing a burnt forest on a Mediterranean mountain (Sierra Nevada, S Spain). In each of three plots located at different elevations, three replicates of three treatments were implemented seven months after the fire, differing in the degree of intervention: "Non-Intervention" (all trees left standing), "Partial Cut plus Lopping" (felling 90% of the trees, cutting the main branches, and leaving all the biomass in situ), and "Salvage Logging" (felling and piling the logs, and masticating the woody debris). Plant composition in each treatment was monitored two years after the fire in linear point transects. Post-fire salvage logging was associated with reduced species richness, Shannon diversity, and total plant cover. Moreover, salvaged sites hosted different species assemblages and 25% lower cover of seeder species (but equal cover of resprouters) compared to the other treatments. Cover of trees and shrubs was also lowest in Salvage Logging, which could suggest a potential slow-down of forest regeneration. Most of these results were consistent among the three plots despite plots hosting different plant communities. Concluding, our study suggests that salvage logging may reduce species richness and diversity, as well as the recruitment of woody species, which could delay the natural regeneration of the ecosystem. Copyright © 2013 Elsevier Ltd. All rights reserved.

  10. Bryophyte species richness on retention aspens recovers in time but community structure does not.

    Science.gov (United States)

    Oldén, Anna; Ovaskainen, Otso; Kotiaho, Janne S; Laaka-Lindberg, Sanna; Halme, Panu

    2014-01-01

    Green-tree retention is a forest management method in which some living trees are left on a logged area. The aim is to offer 'lifeboats' to support species immediately after logging and to provide microhabitats during and after forest re-establishment. Several studies have shown immediate decline in bryophyte diversity after retention logging and thus questioned the effectiveness of this method, but longer term studies are lacking. Here we studied the epiphytic bryophytes on European aspen (Populus tremula L.) retention trees along a 30-year chronosequence. We compared the bryophyte flora of 102 'retention aspens' on 14 differently aged retention sites with 102 'conservation aspens' on 14 differently aged conservation sites. We used a Bayesian community-level modelling approach to estimate the changes in bryophyte species richness, abundance (area covered) and community structure during 30 years after logging. Using the fitted model, we estimated that two years after logging both species richness and abundance of bryophytes declined, but during the following 20-30 years both recovered to the level of conservation aspens. However, logging-induced changes in bryophyte community structure did not fully recover over the same time period. Liverwort species showed some or low potential to benefit from lifeboating and high potential to re-colonise as time since logging increases. Most moss species responded similarly, but two cushion-forming mosses benefited from the logging disturbance while several weft- or mat-forming mosses declined and did not re-colonise in 20-30 years. We conclude that retention trees do not function as equally effective lifeboats for all bryophyte species but are successful in providing suitable habitats for many species in the long-term. To be most effective, retention cuts should be located adjacent to conservation sites, which may function as sources of re-colonisation and support the populations of species that require old-growth forests.

  11. Bryophyte species richness on retention aspens recovers in time but community structure does not.

    Directory of Open Access Journals (Sweden)

    Anna Oldén

    Full Text Available Green-tree retention is a forest management method in which some living trees are left on a logged area. The aim is to offer 'lifeboats' to support species immediately after logging and to provide microhabitats during and after forest re-establishment. Several studies have shown immediate decline in bryophyte diversity after retention logging and thus questioned the effectiveness of this method, but longer term studies are lacking. Here we studied the epiphytic bryophytes on European aspen (Populus tremula L. retention trees along a 30-year chronosequence. We compared the bryophyte flora of 102 'retention aspens' on 14 differently aged retention sites with 102 'conservation aspens' on 14 differently aged conservation sites. We used a Bayesian community-level modelling approach to estimate the changes in bryophyte species richness, abundance (area covered and community structure during 30 years after logging. Using the fitted model, we estimated that two years after logging both species richness and abundance of bryophytes declined, but during the following 20-30 years both recovered to the level of conservation aspens. However, logging-induced changes in bryophyte community structure did not fully recover over the same time period. Liverwort species showed some or low potential to benefit from lifeboating and high potential to re-colonise as time since logging increases. Most moss species responded similarly, but two cushion-forming mosses benefited from the logging disturbance while several weft- or mat-forming mosses declined and did not re-colonise in 20-30 years. We conclude that retention trees do not function as equally effective lifeboats for all bryophyte species but are successful in providing suitable habitats for many species in the long-term. To be most effective, retention cuts should be located adjacent to conservation sites, which may function as sources of re-colonisation and support the populations of species that require old

  12. The source rock characters of U-rich granite

    Energy Technology Data Exchange (ETDEWEB)

    Mingyue, Feng; Debao, He [CNNC Key Laboratory of Uranium Resources Exploration and Evaluation Technology, Beijing Research Institute of Uranium Geology (China)

    2012-03-15

    This paper discusses the stratum composition, lithological association, uranium content of crust and the activation, migration, concentration of uranium at each tectonic cycle in South China. The authors point out that the source rock of U-rich granite is U-rich continental crust which is rich in Si, Al and K. The lithological association is mainly composed of terrestrial clastic rocks formation of mudstone and sandstone, mingled with intermediate-acidic, mafic pyroclastic rocks and carbonate rocks formation. During tectonic movements, the rocks had undergone regional metamorphism, migmatitization, granitization, and formed U-rich granites finally. (authors)

  13. The source rock characters of U-rich granite

    International Nuclear Information System (INIS)

    Feng Mingyue; He Debao

    2012-01-01

    This paper discusses the stratum composition, lithological association, uranium content of crust and the activation, migration, concentration of uranium at each tectonic cycle in South China. The authors point out that the source rock of U-rich granite is U-rich continental crust which is rich in Si, Al and K. The lithological association is mainly composed of terrestrial clastic rocks formation of mudstone and sandstone, mingled with intermediate-acidic, mafic pyroclastic rocks and carbonate rocks formation. During tectonic movements, the rocks had undergone regional metamorphism, migmatitization, granitization, and formed U-rich granites finally. (authors)

  14. Responses of Cryptofaunal Species Richness and Trophic Potential to Coral Reef Habitat Degradation

    Directory of Open Access Journals (Sweden)

    Derek P. Manzello

    2012-02-01

    Full Text Available Coral reefs are declining worldwide as a result of many anthropogenic disturbances. This trend is alarming because coral reefs are hotspots of marine biodiversity and considered the ‘rainforests of the sea. As in the rainforest, much of the diversity on a coral reef is cryptic, remaining hidden among the cracks and crevices of structural taxa. Although the cryptofauna make up the majority of a reef’s metazoan biodiversity, we know little about their basic ecology or how these communities respond to reef degradation. Emerging research shows that the species richness of the motile cryptofauna is higher among dead (framework vs. live coral substrates and, surprisingly, increases within successively more eroded reef framework structures, ultimately reaching a maximum in dead coral rubble. Consequently, the paradigm that abundant live coral is the apex of reef diversity needs to be clarified. This provides guarded optimism amidst alarming reports of declines in live coral cover and the impending doom of coral reefs, as motile cryptic biodiversity should persist independent of live coral cover. Granted, the maintenance of this high species richness is contingent on the presence of reef rubble, which will eventually be lost due to physical, chemical, and biological erosion if not replenished by live coral calcification and mortality. The trophic potential of a reef, as inferred from the abundance of cryptic organisms, is highest on live coral. Among dead framework substrates, however, the density of cryptofauna reaches a peak at intermediate levels of degradation. In summary, the response of the motile cryptofauna, and thus a large fraction of the reef’s biodiversity, to reef degradation is more complex and nuanced than currently thought; such that species richness may be less sensitive than overall trophic function.

  15. Moisture and nutrients determine the distribution and richness of India's large herbivore species assemblage

    NARCIS (Netherlands)

    Ahrestani, F.S.; Heitkonig, I.M.A.; Langevelde, van F.; Vaidyanathan, S.; Madhusudan, M.D.; Prins, H.H.T.

    2011-01-01

    The goal of this study was to test whether body-mass based foraging principles, guided by plant available moisture (PAM) and plant available nutrients (PAN), could explain large mammalian herbivore species distribution and richness in India. We tested (1) whether the occurrence of larger-bodied

  16. Halogens in chondritic meteorites and terrestrial accretion

    Science.gov (United States)

    Clay, Patricia L.; Burgess, Ray; Busemann, Henner; Ruzié-Hamilton, Lorraine; Joachim, Bastian; Day, James M. D.; Ballentine, Christopher J.

    2017-11-01

    Volatile element delivery and retention played a fundamental part in Earth’s formation and subsequent chemical differentiation. The heavy halogens—chlorine (Cl), bromine (Br) and iodine (I)—are key tracers of accretionary processes owing to their high volatility and incompatibility, but have low abundances in most geological and planetary materials. However, noble gas proxy isotopes produced during neutron irradiation provide a high-sensitivity tool for the determination of heavy halogen abundances. Using such isotopes, here we show that Cl, Br and I abundances in carbonaceous, enstatite, Rumuruti and primitive ordinary chondrites are about 6 times, 9 times and 15-37 times lower, respectively, than previously reported and usually accepted estimates. This is independent of the oxidation state or petrological type of the chondrites. The ratios Br/Cl and I/Cl in all studied chondrites show a limited range, indistinguishable from bulk silicate Earth estimates. Our results demonstrate that the halogen depletion of bulk silicate Earth relative to primitive meteorites is consistent with the depletion of lithophile elements of similar volatility. These results for carbonaceous chondrites reveal that late accretion, constrained to a maximum of 0.5 ± 0.2 per cent of Earth’s silicate mass, cannot solely account for present-day terrestrial halogen inventories. It is estimated that 80-90 per cent of heavy halogens are concentrated in Earth’s surface reservoirs and have not undergone the extreme early loss observed in atmosphere-forming elements. Therefore, in addition to late-stage terrestrial accretion of halogens and mantle degassing, which has removed less than half of Earth’s dissolved mantle gases, the efficient extraction of halogen-rich fluids from the solid Earth during the earliest stages of terrestrial differentiation is also required to explain the presence of these heavy halogens at the surface. The hydropilic nature of halogens, whereby they track

  17. Summer Ephemeroptera, Plecoptera, and Trichoptera (EPT) species richness and community structure in the lower Illinois River basin of Illinois

    Science.gov (United States)

    DeWalt, R.E.; Webb, D.W.; Harris, M.A.

    1999-01-01

    Ephemeroptera, Plecoptera, and Trichoptera (EPT) species richness is useful for monitoring stream health, but no published studies in Illinois quantitatively document EPT richness or assemblage structure. The objectives of this study were to characterize adult EPT richness and structure and relate these to relative water quality at eight stream sites (160-69,300 km3 area) in the lower Illinois River basin. Adults were ultra-violet light trapped in June, July, and August 1997. Nutrient enrichment by nitrate and nitrite nitrogen was strongly evident, especially in smaller drainages, while critical loss of stable habitat was observed in larger water bodies. Seventy EPT species were identified from 17,889 specimens. Trichoptera were by far the most speciose (41 species), followed by Ephemeroptera (26), and Plecoptera (3). Caddisflies also dominated species richness across sites, contributing 18.0 of the average 28.9 total EPT species collected. Site EPT richness varied significantly (F = 5.51, p = 0.003, df = 7), with smaller drainages supporting greater richness, generally. Differences were also evident for months (F = 21.7, p = 0.0001, df = 2), with June being lower (11.8 average) than either July (20.6) or August (18.1) values. Hilsenhoff biotic index (HBI) scores did not vary significantly across sites (F = 0.7, p = 0.7, df = 7), but were different across months (F = 5.4, p = 0.02, df = 2). June (4.23) and July (4.53) means were not different, but both were lower (of better quality) than August (5.33) scores. The relationship of EPT to HBI scores was not investigated statistically due to problems of sample size and interdependence of monthly samples, but graphical analysis suggested no consistent relationship. This suggested a decoupling of the HBI from the EPT and implied that the gain in taxonomic resolution achieved by using adults outstripped the resolution of the HBI. Use of the HBI to characterize adult aquatic insect communities is discouraged. New state

  18. Comparison between the shrimp species richness (Caridea and Dendrobranchiata, Decapoda, Crustacea of the south and north mid Atlantic ridge

    Directory of Open Access Journals (Sweden)

    Irene Azevedo Cardoso

    2014-03-01

    Full Text Available The Mid Atlantic Ridge (MAR is a seamount chain extending for 60.000 km, divided into south and north regions by the Equatorial Fracture which cuts across it. This latter has a maximum depth of 7,760 m and an average width of 19 km. In this study we include data from the two cruises of the international project MAR-ECO, undertaken, respectively, one on the north and the other on the south MAR. Our main objective is to compare the species richness and species composition of pelagic and benthic decapod shrimps of these two areas to observe the patterns of their latitudinal distribution along the MAR. Using rarefaction methods, we obtained interesting results: the pelagic samples curve of the northern MAR is almost an asymptote, so we concluded that we are close to the true number of pelagic shrimp species for this region. The pelagic samples curve of the southern MAR had the greatest slope, so our conclusion is that we are still far from the true number of species for this region. A comparison of species richness at 12 samples (the smallest number of samples shared by both the surveys revealed that the pelagic species richness was greater than the demersal, and that the northern MAR contained a larger number of species than the southern.

  19. Delineating landscape-scale processes of hydrology and plant dispersal for species-rich fen conservation : the Operational Landscape Unit approach

    NARCIS (Netherlands)

    Verhoeven, Jos T.A.; Beltman, Boudewijn; Janssen, Ron; Soons, Merel B.

    2017-01-01

    Restoration and conservation of species-rich nature reserves requires inclusion of landscape-scale connections and transport processes such as hydrologic flows and species dispersal. These are important because they provide suitable habitat conditions and an adequate species pool. This study aimed

  20. Plant community composition and species richness in the High Arctic tundra: from the present to the future

    DEFF Research Database (Denmark)

    Nabe-Nielsen, Jacob; Normand, Signe; Hui, Francis K.C.

    2017-01-01

    of these conditions is limited due to the scarcity of studies, especially in the High Arctic. 2. We investigated variations in vascular plant community composition and species richness based on 288 plots distributed on three sites along a coast-inland gradient in Northeast Greenland using a stratified random design......1. Arctic plant communities are altered by climate changes. The magnitude of these alterations depends on whether species distributions are determined by macroclimatic conditions, by factors related to local topography, or by biotic interactions. Our current understanding of the relative importance....... We used an information theoretic approach to determine whether variations in species richness were best explained by macroclimate, by factors related to local topography (including soil water) or by plant-plant interactions. Latent variable models were used to explain patterns in plant community...

  1. Effects of plant diversity on primary production and species interactions in brackish water angiosperm communities

    DEFF Research Database (Denmark)

    Salo, Tiina; Gustafsson, Camilla; Boström, Christoffer

    2009-01-01

    Research on plant biodiversity and ecosystem functioning has mainly focused on terrestrial ecosystems, and our understanding of how plant species diversity and interactions affect processes in marine ecosystems is still limited. To investigate if plant species richness and composition influence...... plant productivity in brackish water angiosperm communities, a 14 wk field experiment was conducted. Using a replacement design with a standardized initial aboveground biomass, shoots of Zostera marina, Potamogeton filiformis and P. perfoliatus were planted on a shallow, sandy bottom in replicated...

  2. Estimating species richness and status of solitary bees and bumblebees in agricultural semi-natural habitats

    DEFF Research Database (Denmark)

    Calabuig, Isabel

    2000-01-01

    Estimation of Western Europe number of bee species varies between 2000 and 4500 (Williams 1995) but there are substantial indications of a decline in bee species in Europe and other regions. In Denmark, wild bee species richness, distribution, and abundance have not been studied in detail for about...... 75 years, and nothing is known about which species are potentially vulnerable or endangered. A rough estimate of solitary bees and bumblebees includes approximately 238 species (26 genera) and 29 species respectively. In a pan-trap survey of six kilometres of semi-natural habitats in a Danish...... agricultural landscape, 72 solitary bee species and 19 species of bumblebees were recorded, several of which are considered vulnerable or endangered in neighbouring countries. Nesting conditions for rare cavity-nesting species and the possible role of the semi-natural habitats as corridors for species...

  3. Determining the numbers of a landscape architect species (Tapirus terrestris), using footprints.

    Science.gov (United States)

    Moreira, Danielle O; Alibhai, Sky K; Jewell, Zoe C; da Cunha, Cristina J; Seibert, Jardel B; Gatti, Andressa

    2018-01-01

    As a landscape architect and a major seed disperser, the lowland tapir ( Tapirus terrestris ) is an important indicator of the ecological health of certain habitats. Therefore, reliable data regarding tapir populations are fundamental in understanding ecosystem dynamics, including those associated with the Atlantic Forest in Brazil. Currently, many population monitoring studies use invasive tagging with radio or satellite/Global Positioning System (GPS) collars. These techniques can be costly and unreliable, and the immobilization required carries physiological risks that are undesirable particularly for threatened and elusive species such as the lowland tapir. We collected data from one of the last regions with a viable population of lowland tapir in the south-eastern Atlantic Forest, Brazil, using a new non-invasive method for identifying species, the footprint identification technique (FIT). We identified the minimum number of tapirs in the study area and, in addition, we observed that they have overlapping ranges. Four hundred and forty footprints from 46 trails collected from six locations in the study area in a landscape known to contain tapir were analyzed, and 29 individuals were identified from these footprints. We demonstrate a practical application of FIT for lowland tapir censusing. Our study shows that FIT is an effective method for the identification of individuals of a threatened species, even when they lack visible natural markings on their bodies. FIT offers several benefits over other methods, especially for tapir management. As a non-invasive method, it can be used to census or monitor species, giving rapid feedback to managers of protected areas.

  4. Determining the numbers of a landscape architect species (Tapirus terrestris, using footprints

    Directory of Open Access Journals (Sweden)

    Danielle O. Moreira

    2018-03-01

    Full Text Available Background As a landscape architect and a major seed disperser, the lowland tapir (Tapirus terrestris is an important indicator of the ecological health of certain habitats. Therefore, reliable data regarding tapir populations are fundamental in understanding ecosystem dynamics, including those associated with the Atlantic Forest in Brazil. Currently, many population monitoring studies use invasive tagging with radio or satellite/Global Positioning System (GPS collars. These techniques can be costly and unreliable, and the immobilization required carries physiological risks that are undesirable particularly for threatened and elusive species such as the lowland tapir. Methods We collected data from one of the last regions with a viable population of lowland tapir in the south-eastern Atlantic Forest, Brazil, using a new non-invasive method for identifying species, the footprint identification technique (FIT. Results We identified the minimum number of tapirs in the study area and, in addition, we observed that they have overlapping ranges. Four hundred and forty footprints from 46 trails collected from six locations in the study area in a landscape known to contain tapir were analyzed, and 29 individuals were identified from these footprints. Discussion We demonstrate a practical application of FIT for lowland tapir censusing. Our study shows that FIT is an effective method for the identification of individuals of a threatened species, even when they lack visible natural markings on their bodies. FIT offers several benefits over other methods, especially for tapir management. As a non-invasive method, it can be used to census or monitor species, giving rapid feedback to managers of protected areas.

  5. Genomic diversity guides conservation strategies among rare terrestrial orchid species when taxonomy remains uncertain.

    Science.gov (United States)

    Ahrens, Collin W; Supple, Megan A; Aitken, Nicola C; Cantrill, David J; Borevitz, Justin O; James, Elizabeth A

    2017-06-01

    Species are often used as the unit for conservation, but may not be suitable for species complexes where taxa are difficult to distinguish. Under such circumstances, it may be more appropriate to consider species groups or populations as evolutionarily significant units (ESUs). A population genomic approach was employed to investigate the diversity within and among closely related species to create a more robust, lineage-specific conservation strategy for a nationally endangered terrestrial orchid and its relatives from south-eastern Australia. Four putative species were sampled from a total of 16 populations in the Victorian Volcanic Plain (VVP) bioregion and one population of a sub-alpine outgroup in south-eastern Australia. Morphological measurements were taken in situ along with leaf material for genotyping by sequencing (GBS) and microsatellite analyses. Species could not be differentiated using morphological measurements. Microsatellite and GBS markers confirmed the outgroup as distinct, but only GBS markers provided resolution of population genetic structure. The nationally endangered Diuris basaltica was indistinguishable from two related species ( D. chryseopsis and D. behrii ), while the state-protected D. gregaria showed genomic differentiation. Genomic diversity identified among the four Diuris species suggests that conservation of this taxonomically complex group will be best served by considering them as one ESU rather than separately aligned with species as currently recognized. This approach will maximize evolutionary potential among all species during increased isolation and environmental change. The methods used here can be applied generally to conserve evolutionary processes for groups where taxonomic uncertainty hinders the use of species as conservation units. © The Author 2017. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com

  6. Response of Plant Height, Species Richness and Aboveground Biomass to Flooding Gradient along Vegetation Zones in Floodplain Wetlands, Northeast China

    Science.gov (United States)

    Lou, Yanjing; Pan, Yanwen; Gao, Chuanyu; Jiang, Ming; Lu, Xianguo; Xu, Y. Jun

    2016-01-01

    Flooding regime changes resulting from natural and human activity have been projected to affect wetland plant community structures and functions. It is therefore important to conduct investigations across a range of flooding gradients to assess the impact of flooding depth on wetland vegetation. We conducted this study to identify the pattern of plant height, species richness and aboveground biomass variation along the flooding gradient in floodplain wetlands located in Northeast China. We found that the response of dominant species height to the flooding gradient depends on specific species, i.e., a quadratic response for Carex lasiocarpa, a negative correlation for Calamagrostis angustifolia, and no response for Carex appendiculata. Species richness showed an intermediate effect along the vegetation zone from marsh to wet meadow while aboveground biomass increased. When the communities were analysed separately, only the water table depth had significant impact on species richness for two Carex communities and no variable for C. angustifolia community, while height of dominant species influenced aboveground biomass. When the three above-mentioned communities were grouped together, variations in species richness were mainly determined by community type, water table depth and community mean height, while variations in aboveground biomass were driven by community type and the height of dominant species. These findings indicate that if habitat drying of these herbaceous wetlands in this region continues, then two Carex marshes would be replaced gradually by C. angustifolia wet meadow in the near future. This will lead to a reduction in biodiversity and an increase in productivity and carbon budget. Meanwhile, functional traits must be considered, and should be a focus of attention in future studies on the species diversity and ecosystem function in this region. PMID:27097325

  7. Altitudinal patterns in breeding bird species richness and density in relation to climate, habitat heterogeneity, and migration influence in a temperate montane forest (South Korea).

    Science.gov (United States)

    Kim, Jin-Yong; Lee, Sanghun; Shin, Man-Seok; Lee, Chang-Hoon; Seo, Changwan; Eo, Soo Hyung

    2018-01-01

    Altitudinal patterns in the population ecology of mountain bird species are useful for predicting species occurrence and behavior. Numerous hypotheses about the complex interactions among environmental factors have been proposed; however, these still remain controversial. This study aimed to identify the altitudinal patterns in breeding bird species richness or density and to test the hypotheses that climate, habitat heterogeneity (horizontal and vertical), and heterospecific attraction in a temperate forest, South Korea. We conducted a field survey of 142 plots at altitudes between 200 and 1,400 m a.s.l in the breeding season. A total of 2,771 individuals from 53 breeding bird species were recorded. Altitudinal patterns of species richness and density showed a hump-shaped pattern, indicating that the highest richness and density could be observed at moderate altitudes. Models constructed with 13 combinations of six variables demonstrated that species richness was positively correlated with vertical and horizontal habitat heterogeneity. Density was positively correlated with vertical, but not horizontal habitat heterogeneity, and negatively correlated with migratory bird ratio. No significant relationships were found between spring temperature and species richness or density. Therefore, the observed patterns in species richness support the hypothesis that habitat heterogeneity, rather than climate, is the main driver of species richness. Also, neither habitat heterogeneity nor climate hypotheses fully explains the observed patterns in density. However, vertical habitat heterogeneity does likely help explain observed patterns in density. The heterospecific attraction hypothesis did not apply to the distribution of birds along the altitudinal gradient. Appropriate management of vertical habitat heterogeneity, such as vegetation cover, should be maintained for the conservation of bird diversity in this area.

  8. The incidence of bacterial endosymbionts in terrestrial arthropods.

    Science.gov (United States)

    Weinert, Lucy A; Araujo-Jnr, Eli V; Ahmed, Muhammad Z; Welch, John J

    2015-05-22

    Intracellular endosymbiotic bacteria are found in many terrestrial arthropods and have a profound influence on host biology. A basic question about these symbionts is why they infect the hosts that they do, but estimating symbiont incidence (the proportion of potential host species that are actually infected) is complicated by dynamic or low prevalence infections. We develop a maximum-likelihood approach to estimating incidence, and testing hypotheses about its variation. We apply our method to a database of screens for bacterial symbionts, containing more than 3600 distinct arthropod species and more than 150 000 individual arthropods. After accounting for sampling bias, we estimate that 52% (CIs: 48-57) of arthropod species are infected with Wolbachia, 24% (CIs: 20-42) with Rickettsia and 13% (CIs: 13-55) with Cardinium. We then show that these differences stem from the significantly reduced incidence of Rickettsia and Cardinium in most hexapod orders, which might be explained by evolutionary differences in the arthropod immune response. Finally, we test the prediction that symbiont incidence should be higher in speciose host clades. But while some groups do show a trend for more infection in species-rich families, the correlations are generally weak and inconsistent. These results argue against a major role for parasitic symbionts in driving arthropod diversification. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

  9. Wet season cyanobacterial N enrichment highly correlated with species richness and Nostoc in the northern Australian savannah

    Science.gov (United States)

    Williams, Wendy; Büdel, Burkhard; Williams, Stephen

    2018-04-01

    The Boodjamulla National Park research station is situated in the north-western Queensland dry savannah, where the climate is dominated by summer monsoons and virtually dry winters. Under shrub canopies and in between the tussock grasses cyanobacterial crusts almost entirely cover the flood plain soil surfaces. Seasonality drives N fixation, and in the savannah this has a large impact on both plant and soil function. Many cyanobacteria fix dinitrogen that is liberated into the soil in both inorganic and organic N forms. We examined cyanobacterial species richness and bioavailable N spanning 7 months of a typical wet season. Over the wet season cyanobacterial richness ranged from 6 to 19 species. N-fixing Scytonema accounted for seasonal averages between 51 and 93 % of the biocrust. Cyanobacterial richness was highly correlated with N fixation and bioavailable N in 0-1 cm. Key N-fixing species such as Nostoc, Symploca and Gloeocapsa significantly enriched soil N although Nostoc was the most influential. Total seasonal N fixation by cyanobacteria demonstrated the variability in productivity according to the number of wet days as well as the follow-on days where the soil retained adequate moisture. Based on total active days per month we estimated that N soil enrichment via cyanobacteria would be ˜ 5.2 kg ha-1 annually which is comparable to global averages. This is a substantial contribution to the nutrient-deficient savannah soils that are almost entirely reliant on the wet season for microbial turnover of organic matter. Such well-defined seasonal trends and synchronisation in cyanobacterial species richness, N fixation, bioavailable N and C fixation (Büdel et al., 2018) provide important contributions to multifunctional microprocesses and soil fertility.

  10. Ferromanganese nodule fauna in the Tropical North Pacific Ocean: Species richness, faunal cover and spatial distribution

    Science.gov (United States)

    Veillette, Julie; Sarrazin, Jozée; Gooday, Andrew J.; Galéron, Joëlle; Caprais, Jean-Claude; Vangriesheim, Annick; Étoubleau, Joël; Christian, James R.; Kim Juniper, S.

    2007-11-01

    The poorly known ferromanganese nodule fauna is a widespread hard substratum community in the deep sea that will be considerably impacted by large-scale nodule mining operations. The objective of this study was to analyze the spatial distribution of the fauna attached to nodules in the Clarion-Clipperton Fracture Zone at two scales; a regional scale that includes the east (14°N, 130°W) and the west (9°N, 150°W) zones and a local scale in which different geological facies (A, B, C and west) are recognizable. The fauna associated with 235 nodules was quantitatively described: 104 nodules from the east zone (15 of facies A, 50 of facies B and 39 of facies C) and 131 nodules from the west zone. Percent cover was used to quantify the extent of colonization at the time of sampling, for 42 species out of the 62 live species observed. Fauna covered up to 18% of exposed nodule surface with an average of about 3%. While species richness increased with exposed nodule surface, both at the regional and at the facies scales (except for facies A), total species density decreased (again except for facies A). When all nodules were included in the statistical analysis, there was no relation between faunal cover and exposed nodule surface. Nevertheless, faunal cover did decrease with exposed nodule surface for the east zone in general and for both facies B and C in particular. Species distributions among facies were significantly different but explained only a very small portion of the variance (˜5%). We identified two groups of associated species: a first group of two species and a second group of six species. The other species (34) were independently distributed, suggesting that species interactions play only a minor role in the spatial distribution of nodule fauna. The flux of particulate organic carbon to the bottom is the only major environmental factor considered to vary between the two zones within this study. We conclude that the higher species richness and higher

  11. Terrestrial and aquatic mammals of the Pantanal

    Directory of Open Access Journals (Sweden)

    CJR. Alho

    Full Text Available Different works have registered the number of mammal species within the natural habitats of the Pantanal based on currently known records, with species richness ranging from 89 to 152 of annotated occurrences. Our present list sums 174 species. However, at least three factors have to be emphasised to deal with recorded numbers: 1 to establish the ecotone limit between the floodplain (which is the Pantanal and its neighbouring domain like the Cerrado, besides the existence of maps recently produced; 2 the lack of intensive surveys, especially on small mammals, rodents and marsupials; and 3 the constant taxonomic revision on bats, rodents and marsupials. Some species are very abundant - for example the capybara Hydrochoerus hydrochaeris and the crab-eating fox Cerdocyon thous, and some are rare, and others are still intrinsically rare - for example, the bush dog Speothos venaticus. Abundance of species is assumed to reflect ecological resources of the habitat. Local diversity and number of individuals of wild rodents and marsupials also rely on the offering of ecological resources and behavioural specialisation to microhabitat components. A large number of species interact with the type of the vegetation of the habitat, by means of habitat selection through active patterns of ecological behaviour, resulting on dependency on arboreal and forested habitats of the Pantanal. In addition, mammals respond to seasonal shrinking-and-expansion of habitats due to flooding regime of the Pantanal. The highest number of species is observed during the dry season, when there is a considerable expansion of terrestrial habitats, mainly seasonally flooded grassland. Major threats to mammal species are the loss and alteration of habitats due to human intervention, mainly deforestation, unsustainable agricultural and cattle-ranching practices, which convert the natural vegetation into pastures. The Pantanal still harbours about a dozen of species officially listened

  12. Relief influence on tree species richness in secondary forest fragments of Atlantic Forest, SE, Brazil

    OpenAIRE

    Silva,William Goulart da; Metzger,Jean Paul; Bernacci,Luis Carlos; Catharino,Eduardo Luís Martins; Durigan,Giselda; Simões,Sílvio

    2008-01-01

    The aim of this work was to explore the relationship between tree species richness and morphological characteristics of relief at the Ibiúna Plateau (SE Brazil). We sampled 61 plots of 0.30 ha, systematically established in 20 fragments of secondary forest (2-274 ha) and in three areas within a continuous secondary forest site, Morro Grande Reserve (9,400 ha). At each plot, 100 trees with diameter at breast height > 5 cm were sampled by the point centered quarter method, and total richness an...

  13. Habitat availability and heterogeneity and the indo-pacific warm pool as predictors of marine species richness in the tropical Indo-Pacific.

    Science.gov (United States)

    Sanciangco, Jonnell C; Carpenter, Kent E; Etnoyer, Peter J; Moretzsohn, Fabio

    2013-01-01

    Range overlap patterns were observed in a dataset of 10,446 expert-derived marine species distribution maps, including 8,295 coastal fishes, 1,212 invertebrates (crustaceans and molluscs), 820 reef-building corals, 50 seagrasses, and 69 mangroves. Distributions of tropical Indo-Pacific shore fishes revealed a concentration of species richness in the northern apex and central region of the Coral Triangle epicenter of marine biodiversity. This pattern was supported by distributions of invertebrates and habitat-forming primary producers. Habitat availability, heterogeneity, and sea surface temperatures were highly correlated with species richness across spatial grains ranging from 23,000 to 5,100,000 km(2) with and without correction for autocorrelation. The consistent retention of habitat variables in our predictive models supports the area of refuge hypothesis which posits reduced extinction rates in the Coral Triangle. This does not preclude support for a center of origin hypothesis that suggests increased speciation in the region may contribute to species richness. In addition, consistent retention of sea surface temperatures in models suggests that available kinetic energy may also be an important factor in shaping patterns of marine species richness. Kinetic energy may hasten rates of both extinction and speciation. The position of the Indo-Pacific Warm Pool to the east of the Coral Triangle in central Oceania and a pattern of increasing species richness from this region into the central and northern parts of the Coral Triangle suggests peripheral speciation with enhanced survival in the cooler parts of the Coral Triangle that also have highly concentrated available habitat. These results indicate that conservation of habitat availability and heterogeneity is important to reduce extinction of marine species and that changes in sea surface temperatures may influence the evolutionary potential of the region.

  14. Habitat availability and heterogeneity and the indo-pacific warm pool as predictors of marine species richness in the tropical Indo-Pacific.

    Directory of Open Access Journals (Sweden)

    Jonnell C Sanciangco

    Full Text Available Range overlap patterns were observed in a dataset of 10,446 expert-derived marine species distribution maps, including 8,295 coastal fishes, 1,212 invertebrates (crustaceans and molluscs, 820 reef-building corals, 50 seagrasses, and 69 mangroves. Distributions of tropical Indo-Pacific shore fishes revealed a concentration of species richness in the northern apex and central region of the Coral Triangle epicenter of marine biodiversity. This pattern was supported by distributions of invertebrates and habitat-forming primary producers. Habitat availability, heterogeneity, and sea surface temperatures were highly correlated with species richness across spatial grains ranging from 23,000 to 5,100,000 km(2 with and without correction for autocorrelation. The consistent retention of habitat variables in our predictive models supports the area of refuge hypothesis which posits reduced extinction rates in the Coral Triangle. This does not preclude support for a center of origin hypothesis that suggests increased speciation in the region may contribute to species richness. In addition, consistent retention of sea surface temperatures in models suggests that available kinetic energy may also be an important factor in shaping patterns of marine species richness. Kinetic energy may hasten rates of both extinction and speciation. The position of the Indo-Pacific Warm Pool to the east of the Coral Triangle in central Oceania and a pattern of increasing species richness from this region into the central and northern parts of the Coral Triangle suggests peripheral speciation with enhanced survival in the cooler parts of the Coral Triangle that also have highly concentrated available habitat. These results indicate that conservation of habitat availability and heterogeneity is important to reduce extinction of marine species and that changes in sea surface temperatures may influence the evolutionary potential of the region.

  15. Links between plant litter chemistry, species diversity, and below-ground ecosystem function.

    Science.gov (United States)

    Meier, Courtney L; Bowman, William D

    2008-12-16

    Decomposition is a critical source of plant nutrients, and drives the largest flux of terrestrial C to the atmosphere. Decomposing soil organic matter typically contains litter from multiple plant species, yet we lack a mechanistic understanding of how species diversity influences decomposition processes. Here, we show that soil C and N cycling during decomposition are controlled by the composition and diversity of chemical compounds within plant litter mixtures, rather than by simple metrics of plant species diversity. We amended native soils with litter mixtures containing up to 4 alpine plant species, and we used 9 litter chemical traits to evaluate the chemical composition (i.e., the identity and quantity of compounds) and chemical diversity of the litter mixtures. The chemical composition of the litter mixtures was the strongest predictor of soil respiration, net N mineralization, and microbial biomass N. Soil respiration and net N mineralization rates were also significantly correlated with the chemical diversity of the litter mixtures. In contrast, soil C and N cycling rates were poorly correlated with plant species richness, and there was no relationship between species richness and the chemical diversity of the litter mixtures. These results indicate that the composition and diversity of chemical compounds in litter are potentially important functional traits affecting decomposition, and simple metrics like plant species richness may fail to capture variation in these traits. Litter chemical traits therefore provide a mechanistic link between organisms, species diversity, and key components of below-ground ecosystem function.

  16. Urban habitat complexity affects species richness but not environmental filtering of morphologically-diverse ants

    Directory of Open Access Journals (Sweden)

    Alessandro Ossola

    2015-10-01

    Full Text Available Habitat complexity is a major determinant of structure and diversity of ant assemblages. Following the size-grain hypothesis, smaller ant species are likely to be advantaged in more complex habitats compared to larger species. Habitat complexity can act as an environmental filter based on species size and morphological traits, therefore affecting the overall structure and diversity of ant assemblages. In natural and semi-natural ecosystems, habitat complexity is principally regulated by ecological successions or disturbance such as fire and grazing. Urban ecosystems provide an opportunity to test relationships between habitat, ant assemblage structure and ant traits using novel combinations of habitat complexity generated and sustained by human management. We sampled ant assemblages in low-complexity and high-complexity parks, and high-complexity woodland remnants, hypothesizing that (i ant abundance and species richness would be higher in high-complexity urban habitats, (ii ant assemblages would differ between low- and high-complexity habitats and (iii ants living in high-complexity habitats would be smaller than those living in low-complexity habitats. Contrary to our hypothesis, ant species richness was higher in low-complexity habitats compared to high-complexity habitats. Overall, ant assemblages were significantly different among the habitat complexity types investigated, although ant size and morphology remained the same. Habitat complexity appears to affect the structure of ant assemblages in urban ecosystems as previously observed in natural and semi-natural ecosystems. However, the habitat complexity filter does not seem to be linked to ant morphological traits related to body size.

  17. Urban habitat complexity affects species richness but not environmental filtering of morphologically-diverse ants

    Science.gov (United States)

    Nash, Michael A.; Christie, Fiona J.; Hahs, Amy K.; Livesley, Stephen J.

    2015-01-01

    Habitat complexity is a major determinant of structure and diversity of ant assemblages. Following the size-grain hypothesis, smaller ant species are likely to be advantaged in more complex habitats compared to larger species. Habitat complexity can act as an environmental filter based on species size and morphological traits, therefore affecting the overall structure and diversity of ant assemblages. In natural and semi-natural ecosystems, habitat complexity is principally regulated by ecological successions or disturbance such as fire and grazing. Urban ecosystems provide an opportunity to test relationships between habitat, ant assemblage structure and ant traits using novel combinations of habitat complexity generated and sustained by human management. We sampled ant assemblages in low-complexity and high-complexity parks, and high-complexity woodland remnants, hypothesizing that (i) ant abundance and species richness would be higher in high-complexity urban habitats, (ii) ant assemblages would differ between low- and high-complexity habitats and (iii) ants living in high-complexity habitats would be smaller than those living in low-complexity habitats. Contrary to our hypothesis, ant species richness was higher in low-complexity habitats compared to high-complexity habitats. Overall, ant assemblages were significantly different among the habitat complexity types investigated, although ant size and morphology remained the same. Habitat complexity appears to affect the structure of ant assemblages in urban ecosystems as previously observed in natural and semi-natural ecosystems. However, the habitat complexity filter does not seem to be linked to ant morphological traits related to body size. PMID:26528416

  18. Terrestrial carbohydrates support freshwater zooplankton during phytoplankton deficiency.

    Science.gov (United States)

    Taipale, Sami J; Galloway, Aaron W E; Aalto, Sanni L; Kahilainen, Kimmo K; Strandberg, Ursula; Kankaala, Paula

    2016-08-11

    Freshwater food webs can be partly supported by terrestrial primary production, often deriving from plant litter of surrounding catchment vegetation. Although consisting mainly of poorly bioavailable lignin, with low protein and lipid content, the carbohydrates from fallen tree leaves and shoreline vegetation may be utilized by aquatic consumers. Here we show that during phytoplankton deficiency, zooplankton (Daphnia magna) can benefit from terrestrial particulate organic matter by using terrestrial-origin carbohydrates for energy and sparing essential fatty acids and amino acids for somatic growth and reproduction. Assimilated terrestrial-origin fatty acids from shoreline reed particles exceeded available diet, indicating that Daphnia may convert a part of their dietary carbohydrates to saturated fatty acids. This conversion was not observed with birch leaf diets, which had lower carbohydrate content. Subsequent analysis of 21 boreal and subarctic lakes showed that diet of herbivorous zooplankton is mainly based on high-quality phytoplankton rich in essential polyunsaturated fatty acids. The proportion of low-quality diets (bacteria and terrestrial particulate organic matter) was <28% of the assimilated carbon. Taken collectively, the incorporation of terrestrial carbon into zooplankton was not directly related to the concentration of terrestrial organic matter in experiments or lakes, but rather to the low availability of phytoplankton.

  19. From the Atlantic Forest to the borders of Amazonia: species richness, distribution, and host association of ectoparasitic flies (Diptera: Nycteribiidae and Streblidae) in northeastern Brazil.

    Science.gov (United States)

    Barbier, Eder; Bernard, Enrico

    2017-11-01

    Better knowledge of the geographical distribution of parasites and their hosts can contribute to clarifying aspects of host specificity, as well as on the interactions among hosts, parasites, and the environment in which both exist. Ectoparasitic flies of the Nycteribiidae and Streblidae families are highly specialized hematophagous parasites of bats, whose distributional patterns, species richness, and associations with hosts remain underexplored and poorly known in Brazil. Here, we used information available in the literature and unpublished data to verify if the occurrence of bat hosts in a given environment influences the occurrence and distribution of nycteribiid and streblid flies in different ecoregions in the northeastern Brazil. We evaluate species richness and similarity between ecoregions and tested correlations between species richness and the number of studies in each ecoregion and federative unit. We recorded 50 species and 15 genera of bat ectoparasitic flies on 36 species and 27 genera of bat hosts. The Atlantic Forest had the highest fly species richness (n = 31; 62%), followed by Caatinga (n = 27; 54%). We detected the formation of distinct groups, with low species overlap between ecoregions for both flies and bats. Fly species richness was correlated with host species richness and with the number of studies in each federative unit, but not with the number of studies by ecoregion. Due to the formation of distinct groups with low species overlap for both groups, host availability is likely to be one of the factors that most influence the occurrence of highly specific flies. We also discuss host specificity for some species, produced an updated list of species and distribution for both nycteribiid and streblid flies with information on interaction networks, and conclude by presenting recommendations for more effective inventories of bat ectoparasites in the future.

  20. Octocoral Species Richness for the Florida Keys National Marine Sanctuary from 1999-2009 (NODC Accession 0123059)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The dataset includes species richness of benthic branching and encrusting gorgonians collected from multiple habitat types across the south Florida shelf, inside and...

  1. Patterns of species richness and abundance among cactus communities receiving different rainfall levels in the semiarid region of Brazil

    Directory of Open Access Journals (Sweden)

    Paulo Sérgio Monteiro Ferreira

    Full Text Available ABSTRACT This study examines the variation in cacti species richness and abundance among sites with different average rainfall and soil types. We assessed a total of 3,660 individuals of six species of Cactaceae: Cereus jamacaru, Melocactus zehntneri, Pilosocereus gounellei, Pilosocereus pachycladus, Tacinga inamoena, and Tacinga palmadora. The greatest species richness and abundance of cacti were at locations with low rainfall and more clayey soils. The species studied differed in multidimensional representation, with some species being more positively related to soils with a higher proportion of fine particles (M. zehntneri and P. gounellei, while others were negatively related to soils with a higher proportion of coarser particles (T. inamoena or positively related to areas with higher rainfall and vegetation cover (C. jamacaru and P. pachycladus. The differential responses of the species of Cactaceae studied in relation to the gradients analyzed demonstrates the need for more research into the relationship between cacti and environmental variables in semiarid ecosystems with high environmental heterogeneity.

  2. Microplastics as an emerging threat to terrestrial ecosystems.

    Science.gov (United States)

    de Souza Machado, Anderson Abel; Kloas, Werner; Zarfl, Christiane; Hempel, Stefan; Rillig, Matthias C

    2018-04-01

    Microplastics (plastics plastic litter or from direct environmental emission. Their potential impacts in terrestrial ecosystems remain largely unexplored despite numerous reported effects on marine organisms. Most plastics arriving in the oceans were produced, used, and often disposed on land. Hence, it is within terrestrial systems that microplastics might first interact with biota eliciting ecologically relevant impacts. This article introduces the pervasive microplastic contamination as a potential agent of global change in terrestrial systems, highlights the physical and chemical nature of the respective observed effects, and discusses the broad toxicity of nanoplastics derived from plastic breakdown. Making relevant links to the fate of microplastics in aquatic continental systems, we here present new insights into the mechanisms of impacts on terrestrial geochemistry, the biophysical environment, and ecotoxicology. Broad changes in continental environments are possible even in particle-rich habitats such as soils. Furthermore, there is a growing body of evidence indicating that microplastics interact with terrestrial organisms that mediate essential ecosystem services and functions, such as soil dwelling invertebrates, terrestrial fungi, and plant-pollinators. Therefore, research is needed to clarify the terrestrial fate and effects of microplastics. We suggest that due to the widespread presence, environmental persistence, and various interactions with continental biota, microplastic pollution might represent an emerging global change threat to terrestrial ecosystems. © 2017 John Wiley & Sons Ltd.

  3. Effects of crop species richness on pest-natural enemy systems based on an experimental model system using a microlandscape.

    Science.gov (United States)

    Zhao, ZiHua; Shi, PeiJian; Men, XingYuan; Ouyang, Fang; Ge, Feng

    2013-08-01

    The relationship between crop richness and predator-prey interactions as they relate to pest-natural enemy systems is a very important topic in ecology and greatly affects biological control services. The effects of crop arrangement on predator-prey interactions have received much attention as the basis for pest population management. To explore the internal mechanisms and factors driving the relationship between crop richness and pest population management, we designed an experimental model system of a microlandscape that included 50 plots and five treatments. Each treatment had 10 repetitions in each year from 2007 to 2010. The results showed that the biomass of pests and their natural enemies increased with increasing crop biomass and decreased with decreasing crop biomass; however, the effects of plant biomass on the pest and natural enemy biomass were not significant. The relationship between adjacent trophic levels was significant (such as pests and their natural enemies or crops and pests), whereas non-adjacent trophic levels (crops and natural enemies) did not significantly interact with each other. The ratio of natural enemy/pest biomass was the highest in the areas of four crop species that had the best biological control service. Having either low or high crop species richness did not enhance the pest population management service and lead to loss of biological control. Although the resource concentration hypothesis was not well supported by our results, high crop species richness could suppress the pest population, indicating that crop species richness could enhance biological control services. These results could be applied in habitat management aimed at biological control, provide the theoretical basis for agricultural landscape design, and also suggest new methods for integrated pest management.

  4. Species richness and distribution of bryophytes within different phytophysiognomies in the Chapada Diamantina region of Brazil

    Directory of Open Access Journals (Sweden)

    Emilia de Brito Valente

    2013-06-01

    Full Text Available The Chapada Diamantina ecoregion is within the caatinga (shrublands biome of Brazil. Environmental factors determine the phytophysiognomies that distinguish the ecoregion from the surrounding areas. This study aimed to investigate the distribution of bryophyte flora in this ecoregion, by phytophysiognomy and elevational zone. Analyzing specimens we collected from five municipalities in the region, together with specimens (previously collected from the region in herbaria, we identified 400 taxa. The phytophysiognomies that presented the highest species richness and the greatest numbers of exclusive taxa were forests and campos rupestres (dry, rocky grasslands, which respectively accounted for 51% and 40% of the taxa, compared with only 5% and 4%, respectively, for the caatinga and cerrado (savanna. Species richness and the numbers of exclusive taxa were highest in the lower and upper montane zones. There was a predominance of neotropical taxa and a significant number of disjunct species found in Brazil and in the Andes region. We conclude that the Chapada Diamantina region is an important center of bryophyte diversity, harboring not only a great number of species overall but also a considerable number of species exclusive to the region, primarily in forests and campos rupestres at elevations above 800 m.

  5. Palaeo-precipitation is a major determinant of palm species richness patterns across Madagascar: a tropical biodiversity hotspot

    Science.gov (United States)

    Rakotoarinivo, Mijoro; Blach-Overgaard, Anne; Baker, William J.; Dransfield, John; Moat, Justin; Svenning, Jens-Christian

    2013-01-01

    The distribution of rainforest in many regions across the Earth was strongly affected by Pleistocene ice ages. However, the extent to which these dynamics are still important for modern-day biodiversity patterns within tropical biodiversity hotspots has not been assessed. We employ a comprehensive dataset of Madagascan palms (Arecaceae) and climate reconstructions from the last glacial maximum (LGM; 21 000 years ago) to assess the relative role of modern environment and LGM climate in explaining geographical species richness patterns in this major tropical biodiversity hotspot. We found that palaeoclimate exerted a strong influence on palm species richness patterns, with richness peaking in areas with higher LGM precipitation relative to present-day even after controlling for modern environment, in particular in northeastern Madagascar, consistent with the persistence of tropical rainforest during the LGM primarily in this region. Our results provide evidence that diversity patterns in the World's most biodiverse regions may be shaped by long-term climate history as well as contemporary environment. PMID:23427173

  6. Fish composition and species richness in eastern South American coastal lagoons: additional support for the freshwater ecoregions of the world.

    Science.gov (United States)

    Petry, A C; Guimarães, T F R; Vasconcellos, F M; Hartz, S M; Becker, F G; Rosa, R S; Goyenola, G; Caramaschi, E P; Díaz de Astarloa, J M; Sarmento-Soares, L M; Vieira, J P; Garcia, A M; Teixeira de Mello, F; de Melo, F A G; Meerhoff, M; Attayde, J L; Menezes, R F; Mazzeo, N; Di Dario, F

    2016-07-01

    The relationships between fish composition, connectivity and morphometry of 103 lagoons in nine freshwater ecoregions (FEOW) between 2·83° S and 37·64° S were evaluated in order to detect possible congruence between the gradient of species richness and similarities of assemblage composition. Most lagoons included in the study were fish species accounted for a significant portion of species richness. Relationships between species and area in small-sized lagoons (composition within the primary, secondary and peripheral or marine divisions revealed strong continental biogeographic patterns only for species less tolerant or intolerant to salinity. Further support for the FEOW scheme in the eastern border of South America is therefore provided, and now includes ecotonal systems inhabited simultaneously by freshwater and marine species of fishes. © 2016 The Fisheries Society of the British Isles.

  7. Evaluation of species richness estimators based on quantitative performance measures and sensitivity to patchiness and sample grain size

    Science.gov (United States)

    Willie, Jacob; Petre, Charles-Albert; Tagg, Nikki; Lens, Luc

    2012-11-01

    Data from forest herbaceous plants in a site of known species richness in Cameroon were used to test the performance of rarefaction and eight species richness estimators (ACE, ICE, Chao1, Chao2, Jack1, Jack2, Bootstrap and MM). Bias, accuracy, precision and sensitivity to patchiness and sample grain size were the evaluation criteria. An evaluation of the effects of sampling effort and patchiness on diversity estimation is also provided. Stems were identified and counted in linear series of 1-m2 contiguous square plots distributed in six habitat types. Initially, 500 plots were sampled in each habitat type. The sampling process was monitored using rarefaction and a set of richness estimator curves. Curves from the first dataset suggested adequate sampling in riparian forest only. Additional plots ranging from 523 to 2143 were subsequently added in the undersampled habitats until most of the curves stabilized. Jack1 and ICE, the non-parametric richness estimators, performed better, being more accurate and less sensitive to patchiness and sample grain size, and significantly reducing biases that could not be detected by rarefaction and other estimators. This study confirms the usefulness of non-parametric incidence-based estimators, and recommends Jack1 or ICE alongside rarefaction while describing taxon richness and comparing results across areas sampled using similar or different grain sizes. As patchiness varied across habitat types, accurate estimations of diversity did not require the same number of plots. The number of samples needed to fully capture diversity is not necessarily the same across habitats, and can only be known when taxon sampling curves have indicated adequate sampling. Differences in observed species richness between habitats were generally due to differences in patchiness, except between two habitats where they resulted from differences in abundance. We suggest that communities should first be sampled thoroughly using appropriate taxon sampling

  8. Comparison of species-rich cover crop mixtures in Hungarian vineyards

    Science.gov (United States)

    Donkó, Adam; Miglécz, Tamas; Valkó, Orsolya; Török, Peter; Deák, Balazs; Kelemen, Andras; Zanathy, Gabor; Drexler, Dora

    2014-05-01

    In case of vine growing, agricultural practices of the past decades - as mechanical cultivation on steep vineyard slopes - can endanger the soil of vineyards. Moreover, climate change scenarios predict heavier rainstorms, which can also promote the degradation of the soil. These are some of the reasons why sustainable floor management plays an increasingly important role in viticulture recently. The use of cover crops in the inter-row has a special importance, especially on steep slopes and in case of organic farming to provide conditions for environmental friendly soil management. Species-rich cover crop seed mixtures may help to prevent erosion and create easier cultivation circumstances. Furthermore they have a positive effect on soil structure, soil fertility and ecosystem functions. However, it is important to find suitable seed mixtures for specific production sites, consisting ideally of native species from local provenance, adapted to the local climate/vine region/vineyard. Requirements for suitable cover crop species are as follows: they should save the soil from erosion and also from compaction caused by the movement of workers and machines, they should not compete significantly with the grapevines, or influence produce quality. We started to develop and apply several species-rich cover crop seed mixtures in spring 2012. During the experiments, three cover crop seed mixtures (Biocont-Ecovin mixture, mixture of legumes, mixture of grasses and herbs) were compared in vineyards of the Tokaj and Szekszárd vine regions of Hungary. Each mixture was sown in three consecutive inter-rows at each experimental site (all together 10 sites). Besides botanical measurements, yield, must quality, and pruning weight was studied in every treatment. The botanical survey showed that the following species of the mixtures established successfully and prospered during the years 2012 and 2013: Coronilla varia, Lotus corniculatus, Medicago lupulina, Onobrychis viciifolia

  9. Simkin et al. 2016 PNAS data on herbaceous species richness and associated plot and covariate information

    Data.gov (United States)

    U.S. Environmental Protection Agency — This dataset includes the geographic location (lat/lon) for 15,136 plots, as well as the herbaceous species richness, climate, soil pH, and other variables related...

  10. Wet season cyanobacterial N enrichment highly correlated with species richness and Nostoc in the northern Australian savannah

    Directory of Open Access Journals (Sweden)

    W. Williams

    2018-04-01

    Full Text Available The Boodjamulla National Park research station is situated in the north-western Queensland dry savannah, where the climate is dominated by summer monsoons and virtually dry winters. Under shrub canopies and in between the tussock grasses cyanobacterial crusts almost entirely cover the flood plain soil surfaces. Seasonality drives N fixation, and in the savannah this has a large impact on both plant and soil function. Many cyanobacteria fix dinitrogen that is liberated into the soil in both inorganic and organic N forms. We examined cyanobacterial species richness and bioavailable N spanning 7 months of a typical wet season. Over the wet season cyanobacterial richness ranged from 6 to 19 species. N-fixing Scytonema accounted for seasonal averages between 51 and 93 % of the biocrust. Cyanobacterial richness was highly correlated with N fixation and bioavailable N in 0–1 cm. Key N-fixing species such as Nostoc, Symploca and Gloeocapsa significantly enriched soil N although Nostoc was the most influential. Total seasonal N fixation by cyanobacteria demonstrated the variability in productivity according to the number of wet days as well as the follow-on days where the soil retained adequate moisture. Based on total active days per month we estimated that N soil enrichment via cyanobacteria would be  ∼  5.2 kg ha−1 annually which is comparable to global averages. This is a substantial contribution to the nutrient-deficient savannah soils that are almost entirely reliant on the wet season for microbial turnover of organic matter. Such well-defined seasonal trends and synchronisation in cyanobacterial species richness, N fixation, bioavailable N and C fixation (Büdel et al., 2018 provide important contributions to multifunctional microprocesses and soil fertility.

  11. Chronic exposure to soil salinity in terrestrial species: Does plasticity and underlying physiology differ among specialized ground-dwelling spiders?

    Science.gov (United States)

    Renault, D; Puzin, C; Foucreau, N; Bouchereau, A; Pétillon, J

    2016-07-01

    In salt marshes, the alternation of low and high tides entails rapid shifts of submersion and aerial exposure for terrestrial communities. In these intertidal environments, terrestrial species have to deal with an osmotic loss in body water content and an increase in sodium chloride concentration when salt load increases. In salt marshes, spiders represent an abundant arthropod group, whose physiological ecology in response to variations of soil salinity must be further investigated. In this study, we compared the effect of salinity on the survival and physiology of three species of Lycosidae; two salt marsh species (Arctosa fulvolineata and Pardosa purbeckensis) and one forest species (P. saltans). Spiders were individually exposed at three salinity conditions (0‰, 35‰ and 70‰) and survival, changes in body water content, hemolymph ions (Na(+), Ca(2+), Mg(2+), K(+); ICP-MS technique) and metabolites (mainly amino acids, polyols, sugars; LC and GC techniques) were assessed. The survival of the forest species P. saltans was very quickly hampered at moderate and high salinities. In this spider, variations of hemolymph ions and metabolites revealed a quick loss of physiological homeostasis and a rapid salt-induced dehydration of the specimens. Conversely, high survival durations were measured in the two salt-marsh spiders, and more particularly in A. fulvolineata. In both P. purbeckensis and A. fulvolineata, the proportion of Na(+), Ca(2+), Mg(2+), K(+) remained constant at the three experimental conditions. Accumulation of hemolymph Na(+) and amino acids (mainly glutamine and proline) demonstrated stronger osmoregulatory capacities in these salt-marsh resident spiders. To conclude, even if phylogenetically close (belonging to the same, monophyletic, family), we found different physiological capacities to cope with salt load among the three tested spider species. Nevertheless, physiological responses to salinity were highly consistent with the realized

  12. Staged invasions across disparate grasslands: Effects of seed provenance, consumers and disturbance on productivity and species richness

    Science.gov (United States)

    John L. Maron; Harald Auge; Dean E. Pearson; Lotte Korell; Isabell Hensen; Katharine N. Suding; Claudia Stein

    2014-01-01

    Exotic plant invasions are thought to alter productivity and species richness, yet these patterns are typically correlative. Few studies have experimentally invaded sites and asked how addition of novel species influences ecosystem function and community structure and examined the role of competitors and/or consumers in mediating these patterns. We invaded disturbed...

  13. Facilitation influences patterns of perennial species abundance and richness in a subtropical dune system.

    Science.gov (United States)

    Dalotto, Cecilia E S; Sühs, Rafael B; Dechoum, Michele S; Pugnaire, Francisco I; Peroni, Nivaldo; Castellani, Tânia T

    2018-04-01

    Positive interactions in plant communities are under-reported in subtropical systems most likely because they are not identified as stressful environments. However, environmental factors or disturbance can limit plant growth in any system and lead to stressful conditions. For instance, salinity and low nutrient and water availability generate a gradient of stressful conditions in coastal systems depending on distance to shore. In a tropical coastal system in SE Brazil, we aimed to assess whether Guapira opposita , a shrub common in restinga environments, acted as nurse involved in ecological succession and which factors influenced its facilitation process. We sampled perennial species above 10 cm in height under the canopy of 35 G. opposita individuals and in neighbouring open areas. Shrub height, canopy area and distance to freshwater bodies were measured in the field, and distance to the ocean was obtained from aerial images. In addition, we measured the distance to the closest forest patch as a potential source of seeds. Plant abundance and species richness were higher under the canopy of G. opposita than in open areas. Facilitation by G. opposita was mainly determined by shrub height, which had a positive relationship with woody and bromeliads abundance and species richness while there was no relationship with the other factors. Overall, our data evidence that tropical environments may be highly stressful for plants and that nurse species play a key role in the regeneration of restinga environments, where their presence is critical to maintain ecosystem diversity and function.

  14. Species composition, richness and nestedness of lizard assemblages from Restinga habitats along the brazilian coast.

    Science.gov (United States)

    Rocha, C F D; Vrcibradic, D; Kiefer, M C; Menezes, V A; Fontes, A F; Hatano, F H; Galdino, C A B; Bergallo, H G; Van Sluys, M

    2014-05-01

    Habitat fragmentation is well known to adversely affect species living in the remaining, relatively isolated, habitat patches, especially for those having small range size and low density. This negative effect has been critical in coastal resting habitats. We analysed the lizard composition and richness of restinga habitats in 16 restinga habitats encompassing three Brazilian states (Rio de Janeiro, Espírito Santo and Bahia) and more than 1500km of the Brazilian coast in order to evaluate if the loss of lizard species following habitat reduction occur in a nested pattern or at random, using the "Nestedness Temperature Calculator" to analyse the distribution pattern of lizard species among the restingas studied. We also estimated the potential capacity that each restinga has to maintain lizard species. Eleven lizard species were recorded in the restingas, although not all species occurred in all areas. The restinga with the richest lizard fauna was Guriri (eight species) whereas the restinga with the lowest richness was Praia do Sul (located at Ilha Grande, a large coastal island). Among the restingas analysed, Jurubatiba, Guriri, Maricá and Praia das Neves, were the most hospitable for lizards. The matrix community temperature of the lizard assemblages was 20.49° (= P restingas exhibited a considerable nested structure. The degree in which an area is hospitable for different assemblages could be used to suggest those with greater value of conservation. We concluded that lizard assemblages in coastal restingas occur at a considerable level of ordination in restinga habitats and that some restinga areas such as Jurubatiba, Guriri, Maricá and Praia das Neves are quite important to preserve lizard diversity of restinga environments.

  15. Rarity, species richness, and the threat of extinction--are plants the same as animals?

    Directory of Open Access Journals (Sweden)

    Sandra Knapp

    2011-05-01

    Full Text Available Assessment of conservation status is done both for areas or habitats and for species (or taxa. IUCN Red List categories have been the principal method of categorising species in terms of extinction risk, and have been shown to be robust and helpful in the groups for which they have been developed. A recent study highlights properties associated with extinction risk in flowering plants, focusing on the species-rich hot spot of the Cape region of South Africa, and concludes that merely following methods derived from studies of vertebrates may not provide the best estimates of extinction risk for plants. Biology, geography, and history all are important factors in risk, and the study poses many questions about how we categorise and assess species for conservation priorities.

  16. Seed dispersal in six species of terrestrial orchids in Biebrza National Park (NE Poland

    Directory of Open Access Journals (Sweden)

    Emilia Brzosko

    2017-09-01

    Full Text Available Knowledge about seed dispersal is required to explain problems in ecology, phylogeography, and conservation biology. Even though seed dispersal is a fundamental mechanism to understand problems at different levels of biological organization (individual, population, species, landscape, it remains one of the least recognized processes. Similar to other groups of plants, very little is known regarding patterns and distances of seed dispersal in orchids. Orchid seeds are generally assumed to be widely dispersed by wind because of their small size and low weight. Between 2006 and 2008, we conducted a field study of the distances at which orchid seeds are dispersed, and determined factors affecting dispersal. Investigations included 13 populations of six terrestrial orchid species – Cypripedium calceolus, Cephalanthera rubra, Epipactis helleborine, Goodyera repens, Neottia ovata, and Platanthera bifolia. To evaluate seed dispersal in orchid populations, 8.5-cm Petri dishes (traps with self-adhesive paper were placed along transects, starting from a group of fruiting plants, which were considered to be the dispersal source. Seeds of the investigated orchid species were dispersed over relatively short distances. There were statistically significant negative correlations between seed density and distance from the fruiting plants. Seeds of species with taller fruiting shoots were dispersed farther than those with shorter ones (R = 0.68, p < 0.05. We discuss the causes and consequences of the dispersal patterns of orchid seeds.

  17. Export of Terrestrially-Derived Organic Matter from the Mississippi River to the Gulf of Mexico Sediments as Determined by Ultrahigh Resolution Mass Spectrometry

    Science.gov (United States)

    Hatcher, P.; Ware, S. A.; Vaughn, D.; Waggoner, D. C.; Bianchi, T. S.

    2017-12-01

    Sediment samples extending from the main channel of the Mississippi River to edge of the continental shelf of the Gulf of Mexico were extracted to recover humic acids from the organic matter and subjected to molecular level characterization by electrospray ionization coupled to Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR-MS). The data show that sedimentary organic matter at the river mouth contains humic substances with a predominantly terrestrial signature resembling those obtained from soils. Condensed aromatic molecules and carboxyl rich alicyclic molecules (CRAM) typify the major structures observed. The CRAM-like molecules persist progressing seaward into the Gulf while the condensed aromatic molecules diminish in relative abundance. This trend is characteristic of traditional mixing of allochthonous terrestrial with autochthonous source materials, consistent with published isotope and lignin phenol biomarker data. Alternatively, the trend could also be explained by oxidative degradation of mainly terrestrial organic matter whereby the condensed aromatic molecules would be selectively oxidized. CRAM molecules would then become selectively enriched as one progresses from the channel to the continental shelf. Laboratory studies show that aromatic molecules (like those in lignin) subjected to oxidative degradation mainly by hydroxyl radical attack, either biologically or non-biologically, undergo molecular rearrangement via ring-opening to form reactive species. These can interact with nucleophilic molecules such as peptides and sulfur-containing species and/or can undergo cycloaddition reactions to produce CRAM-like species. This latter explanation suggests that the main source of organic matter in this coastal depocenter is terrestrial and that autochthonous organic matter contributes little to sedimentary organic matter.

  18. Vertical gradients in species richness and community composition across the twilight zone in the North Pacific Subtropical Gyre.

    Science.gov (United States)

    Sommer, Stephanie A; Van Woudenberg, Lauren; Lenz, Petra H; Cepeda, Georgina; Goetze, Erica

    2017-11-01

    Although metazoan animals in the mesopelagic zone play critical roles in deep pelagic food webs and in the attenuation of carbon in midwaters, the diversity of these assemblages is not fully known. A metabarcoding survey of mesozooplankton diversity across the epipelagic, mesopelagic and upper bathypelagic zones (0-1500 m) in the North Pacific Subtropical Gyre revealed far higher estimates of species richness than expected given prior morphology-based studies in the region (4,024 OTUs, 10-fold increase), despite conservative bioinformatic processing. Operational taxonomic unit (OTU) richness of the full assemblage peaked at lower epipelagic-upper mesopelagic depths (100-300 m), with slight shoaling of maximal richness at night due to diel vertical migration, in contrast to expectations of a deep mesopelagic diversity maximum as reported for several plankton groups in early systematic and zoogeographic studies. Four distinct depth-stratified species assemblages were identified, with faunal transitions occurring at 100 m, 300 m and 500 m. Highest diversity occurred in the smallest zooplankton size fractions (0.2-0.5 mm), which had significantly lower % OTUs classified due to poor representation in reference databases, suggesting a deep reservoir of poorly understood diversity in the smallest metazoan animals. A diverse meroplankton assemblage also was detected (350 OTUs), including larvae of both shallow and deep living benthic species. Our results provide some of the first insights into the hidden diversity present in zooplankton assemblages in midwaters, and a molecular reappraisal of vertical gradients in species richness, depth distributions and community composition for the full zooplankton assemblage across the epipelagic, mesopelagic and upper bathypelagic zones. © 2017 The Authors. Molecular Ecology Published by John Wiley & Sons Ltd.

  19. The Species Richness of Vascular Plants and Amphibia in Major Plant Communities in Temperate to Tropical Australia: Relationship with Annual Biomass Production

    International Nuclear Information System (INIS)

    Specht, R. L.; Tyler, M.J.

    2010-01-01

    Aerodynamic fluxes (frictional, thermal, evaporative) in the atmosphere as it flows over and through a plant community determine the Foliage Projective Covers and eco-morphological attributes of new leaves developed annually in overstorey and understorey strata. The number of leaves produced on vertical foliage shoots depends on available soil water and nutrients, also ambient temperature, during this short growth season. Stem density (number of stems per hectare) and species richness (number of species per hectare) in the overstorey of major Floristic Groups are correlated with annual shoot growth (ASG, t ha-1) in that stratum. Species richness in the overstorey increases in the climatic gradient from the arid to the humid zone as well as with increasing air temperatures (about 10 degree C) from temperate to tropical Australia. Species richness in the understorey is highest in plant communities in temperate Australia, decreasing in the temperature gradient towards the tropics. As with other major plant and animal groups within an ecosystem, the species richness of Amphibia is correlated with the amount of solar energy fixed (per annum) by the major plant formation in the regional photosynthetic potential determined by the foliage shoots (ASG, t ha-1) produced annually in the overstorey.

  20. The Species Richness of Vascular Plants and Amphibia in Major Plant Communities in Temperate to Tropical Australia: Relationship with Annual Biomass Production

    Directory of Open Access Journals (Sweden)

    R. L. Specht

    2010-01-01

    Full Text Available Aerodynamic fluxes (frictional, thermal, evaporative in the atmosphere as it flows over and through a plant community determine the Foliage Projective Covers and eco-morphological attributes of new leaves developed annually in overstorey and understorey strata. The number of leaves produced on vertical foliage shoots depends on available soil water and nutrients, also ambient temperature, during this short growth season. Stem density (number of stems per hectare and species richness (number of species per hectare in the overstorey of major Floristic Groups are correlated with annual shoot growth (ASG, t ha−1 in that stratum. Species richness in the overstorey increases in the climatic gradient from the arid to the humid zone as well as with increasing air temperatures (about 10oC from temperate to tropical Australia. Species richness in the understorey is highest in plant communities in temperate Australia, decreasing in the temperature gradient towards the tropics. As with other major plant and animal groups within an ecosystem, the species richness of Amphibia is correlated with the amount of solar energy fixed (per annum by the major plant formation in the region—a photosynthetic potential determined by the foliage shoots (ASG, t ha−1 produced annually in the overstorey.

  1. Wild felid species richness affected by a corridor in the Lacandona forest, Mexico

    Directory of Open Access Journals (Sweden)

    Gil–Fernández, M.

    2017-02-01

    Full Text Available Wild felids are one of the most vulnerable species due to habitat loss caused by fragmentation of ecosystems. We analyzed the effect of a structural corridor, defined as a strip of vegetation connecting two habitat patches, on the richness and habitat occupancy of felids on three sites in Marqués de Comillas, Chiapas, one with two isolated forest patches, the second with a structural corridor, and the third inside the Montes Azules Biosphere Reserve. We found only two species (L. pardalis and H. yagouaroundi in the isolated forest patches, five species in the structural corridor, and four species inside the Reserve. The corridor did not significantly affect occupancy, but due to the low detection rates, further investigation is needed to rule out differences. Our results highlight the need to manage habitat connectivity in the remaining forests in order to preserve the felid community of Marqués de Comillas, Chiapas, México.

  2. Testing Dragonflies as Species Richness Indicators in a Fragmented Subtropical Atlantic Forest Environment.

    Science.gov (United States)

    Renner, S; Sahlén, G; Périco, E

    2016-06-01

    We surveyed 15 bodies of water among remnants of the Atlantic Forest biome in southern Brazil for adult dragonflies and damselflies to test whether an empirical selection method for diversity indicators could be applied in a subtropical ecosystem, where limited ecological knowledge on species level is available. We found a regional species pool of 34 species distributed in a nested subset pattern with a mean of 11.2 species per locality. There was a pronounced difference in species composition between spring, summer, and autumn, but no differences in species numbers between seasons. Two species, Homeoura chelifera (Selys) and Ischnura capreolus (Hagen), were the strongest candidates for regional diversity indicators, being found only at species-rich localities in our surveyed area and likewise in an undisturbed national forest reserve, serving as a reference site for the Atlantic Forest. Using our selection method, we found it possible to obtain a tentative list of diversity indicators without having detailed ecological information of each species, providing a reference site is available for comparison. The method thus allows for indicator species to be selected in blanco from taxonomic groups that are little known. We hence argue that Odonata can already be incorporated in ongoing assessment programs in the Neotropics, which would also increase the ecological knowledge of the group and allow extrapolation to other taxa.

  3. From water to land: How an invasive clam may function as a resource pulse to terrestrial invertebrates.

    Science.gov (United States)

    Novais, Adriana; Souza, Allan T; Ilarri, Martina; Pascoal, Cláudia; Sousa, Ronaldo

    2015-12-15

    Resource pulses are episodes of low frequency, large magnitude and short duration that result in increased resource availability in space and time, with consequences for food web dynamics. Studies assessing the importance of resource pulses by invasive alien species in the interface between terrestrial and aquatic ecosystems are rare, especially those in the direction from water to land. This study assessed the importance of massive die-offs of the Asian clam Corbicula fluminea (Müller, 1774) as a resource pulse to the terrestrial invertebrate community after an extreme climatic event using a manipulative experiment. We used 5 levels of C. fluminea density (0, 100, 500, 1000 and 2000ind·m(-2)), with terrestrial invertebrates being censused 7, 30 and 90days after C. fluminea addition. We also assessed the possible effect of plots position, where plots that delimited the experiment were assigned as edge plots and the remaining as core plots. Clear differences were detected in abundance, biomass, richness and diversity of terrestrial invertebrates depending on the C. fluminea density, time and position. Interestingly, the highest abundance of adult Diptera was observed 7days after C. fluminea addition, whereas that of the other terrestrial invertebrates was on day 30, both with C. fluminea densities higher than 500ind·m(-2) located on the edge of the experimental design. This study highlights the importance of major resource pulses after massive die-offs of invasive bivalves, contributing with remarkable amounts of carrion for adjacent terrestrial systems. Part of this carrion can be consumed directly by a great number of invertebrate species while the remainder can enter the detrital food web. Given the high density and biomass attained by several invasive bivalves worldwide and the predicted increase in the number, intensity and magnitude of extreme climatic events, the ecological importance of this phenomenon should be further investigated. Copyright © 2015

  4. A Global Trend towards the Loss of Evolutionarily Unique Species in Mangrove Ecosystems.

    Directory of Open Access Journals (Sweden)

    Barnabas H Daru

    Full Text Available The mangrove biome stands out as a distinct forest type at the interface between terrestrial, estuarine, and near-shore marine ecosystems. However, mangrove species are increasingly threatened and experiencing range contraction across the globe that requires urgent conservation action. Here, we assess the spatial distribution of mangrove species richness and evolutionary diversity, and evaluate potential predictors of global declines and risk of extinction. We found that human pressure, measured as the number of different uses associated with mangroves, correlated strongly, but negatively, with extinction probability, whereas species ages were the best predictor of global decline, explaining 15% of variation in extinction risk. Although the majority of mangrove species are categorised by the IUCN as Least Concern, our finding that the more threatened species also tend to be those that are more evolutionarily unique is of concern because their extinction would result in a greater loss of phylogenetic diversity. Finally, we identified biogeographic regions that are relatively species-poor but rich in evolutionary history, and suggest these regions deserve greater conservation priority. Our study provides phylogenetic information that is important for developing a unified management plan for mangrove ecosystems worldwide.

  5. A Global Trend towards the Loss of Evolutionarily Unique Species in Mangrove Ecosystems.

    Science.gov (United States)

    Daru, Barnabas H; Yessoufou, Kowiyou; Mankga, Ledile T; Davies, T Jonathan

    2013-01-01

    The mangrove biome stands out as a distinct forest type at the interface between terrestrial, estuarine, and near-shore marine ecosystems. However, mangrove species are increasingly threatened and experiencing range contraction across the globe that requires urgent conservation action. Here, we assess the spatial distribution of mangrove species richness and evolutionary diversity, and evaluate potential predictors of global declines and risk of extinction. We found that human pressure, measured as the number of different uses associated with mangroves, correlated strongly, but negatively, with extinction probability, whereas species ages were the best predictor of global decline, explaining 15% of variation in extinction risk. Although the majority of mangrove species are categorised by the IUCN as Least Concern, our finding that the more threatened species also tend to be those that are more evolutionarily unique is of concern because their extinction would result in a greater loss of phylogenetic diversity. Finally, we identified biogeographic regions that are relatively species-poor but rich in evolutionary history, and suggest these regions deserve greater conservation priority. Our study provides phylogenetic information that is important for developing a unified management plan for mangrove ecosystems worldwide.

  6. Mapping and Quantifying Terrestrial Vertebrate Biodiversity at ...

    Science.gov (United States)

    The ability to assess, report, map, and forecast functions of ecosystems is critical to our capacity to make informed decisions to maintain the sustainable nature of our environment. Because of the variability among living organisms and levels of organization (e.g. genetic, species, ecosystem), biodiversity has always been difficult to measure precisely, especially within a systematic manner and over multiple scales. In answer to this challenge, the U.S. Environmental Protection Agency has created a partnership with other Federal agencies, academic institutions, and Non-Governmental Organizations to develop the EnviroAtlas (https://www.epa.gov/enviroatlas), an online national Decision Support Tool that allows users to view and analyze the geographical description of the supply and demand for ecosystem services, as well as the drivers of change. As part of the EnviroAtlas, an approach has been developed that uses deductive habitat models for all terrestrial vertebrates of the conterminous United States and clusters them into biodiversity metrics that relate to ecosystem service-relevant categories. Metrics, such as species and taxon richness, have been developed and integrated with other measures of biodiversity. Collectively, these metrics provide a consistent scalable process from which to make geographic comparisons, provide thematic assessments, and to monitor status and trends in biodiversity. The national biodiversity component operates across approximatel

  7. Species richness and distribution patterns of echinoderms in the southwestern Atlantic Ocean (34-56°S

    Directory of Open Access Journals (Sweden)

    Valeria Souto

    2014-06-01

    Full Text Available The aim of this study was to compile and analyse available historical information on echinoderms in the southwestern Atlantic Ocean in order to make a synthesis of present taxonomical knowledge, to identify patterns of geographical distribution of echinoderm assemblages and to test the validity of the current zoogeographic scheme for this group. This study was conducted on the Argentinean continental shelf, southwestern Atlantic Ocean (34-56°S. An intensive research on geo-referenced data was carried out to make a knowledge synthesis on echinoderm species and thus create a historical database. Multivariate analysis was used to analyse the faunal composition through latitudinal and bathymetric gradients as well as echinoderm associations. The results confirmed the existence of two faunal associations that correspond to the traditional zoogeographic scheme established for the Argentine Sea: the Argentinean and Magellan Provinces. The Argentinean Province had 46 widely distributed species. Of the 86 species recorded in the Magellan Province, a high percentage (25% were also found in Antarctic waters, suggesting a strong connection between the echinoderm fauna of this province and the Antarctic Region. The species richness between 34 and 56°S in the Atlantic Ocean showed a significant increase in reference to latitude, with the highest values being recorded between 46 and 56°S. In view of the high percentage of shared species with Antarctica, considered a hot-spot region in terms of echinoderm diversity, the pattern of distribution of species richness observed in our study area could correspond to a dispersion of this species from Antarctic to sub-Antarctic regions.

  8. Species richness and the temporal stability of biomass production: a new analysis of recent biodiversity experiments

    NARCIS (Netherlands)

    Gross, K.; Cardinale, B.J.; Fox, J.W.; Gonzalez, A.; Loreau, M.; Polley, H.W.; Reich, P.B.; Ruijven, van J.

    2013-01-01

    The relationship between biological diversity and ecological stability has fascinated ecologists for decades. Determining the generality of this relationship, and discovering the mechanisms that underlie it, are vitally important for ecosystem management. Here, we investigate how species richness

  9. Species composition, richness and nestedness of lizard assemblages from Restinga habitats along the brazilian coast

    Directory of Open Access Journals (Sweden)

    CFD. Rocha

    Full Text Available Habitat fragmentation is well known to adversely affect species living in the remaining, relatively isolated, habitat patches, especially for those having small range size and low density. This negative effect has been critical in coastal resting habitats. We analysed the lizard composition and richness of restinga habitats in 16 restinga habitats encompassing three Brazilian states (Rio de Janeiro, Espírito Santo and Bahia and more than 1500km of the Brazilian coast in order to evaluate if the loss of lizard species following habitat reduction occur in a nested pattern or at random, using the “Nestedness Temperature Calculator” to analyse the distribution pattern of lizard species among the restingas studied. We also estimated the potential capacity that each restinga has to maintain lizard species. Eleven lizard species were recorded in the restingas, although not all species occurred in all areas. The restinga with the richest lizard fauna was Guriri (eight species whereas the restinga with the lowest richness was Praia do Sul (located at Ilha Grande, a large coastal island. Among the restingas analysed, Jurubatiba, Guriri, Maricá and Praia das Neves, were the most hospitable for lizards. The matrix community temperature of the lizard assemblages was 20.49° (= P <0.00001; 5000 randomisations; randomisation temperature = 51.45° ± 7.18° SD, indicating that lizard assemblages in the coastal restingas exhibited a considerable nested structure. The degree in which an area is hospitable for different assemblages could be used to suggest those with greater value of conservation. We concluded that lizard assemblages in coastal restingas occur at a considerable level of ordination in restinga habitats and that some restinga areas such as Jurubatiba, Guriri, Maricá and Praia das Neves are quite important to preserve lizard diversity of restinga environments.

  10. Conservation and Biodiversity of Rich Fens

    DEFF Research Database (Denmark)

    Andersen, Dagmar Kappel

    2014-01-01

    Rich fen is a habitat type dependent on a constant supply of nutrient poor, calcium rich groundwater. A high, stable groundwater table, relatively high pH combined with nutrient poor conditions support a special and very species rich vegetation including many rare and threatened plant species. In...

  11. Facilitation influences patterns of perennial species abundance and richness in a subtropical dune system

    Science.gov (United States)

    Dalotto, Cecilia E S; Sühs, Rafael B; Dechoum, Michele S; Pugnaire, Francisco I; Peroni, Nivaldo; Castellani, Tânia T

    2018-01-01

    Abstract Positive interactions in plant communities are under-reported in subtropical systems most likely because they are not identified as stressful environments. However, environmental factors or disturbance can limit plant growth in any system and lead to stressful conditions. For instance, salinity and low nutrient and water availability generate a gradient of stressful conditions in coastal systems depending on distance to shore. In a tropical coastal system in SE Brazil, we aimed to assess whether Guapira opposita, a shrub common in restinga environments, acted as nurse involved in ecological succession and which factors influenced its facilitation process. We sampled perennial species above 10 cm in height under the canopy of 35 G. opposita individuals and in neighbouring open areas. Shrub height, canopy area and distance to freshwater bodies were measured in the field, and distance to the ocean was obtained from aerial images. In addition, we measured the distance to the closest forest patch as a potential source of seeds. Plant abundance and species richness were higher under the canopy of G. opposita than in open areas. Facilitation by G. opposita was mainly determined by shrub height, which had a positive relationship with woody and bromeliads abundance and species richness while there was no relationship with the other factors. Overall, our data evidence that tropical environments may be highly stressful for plants and that nurse species play a key role in the regeneration of restinga environments, where their presence is critical to maintain ecosystem diversity and function. PMID:29644027

  12. Using potential distributions to explore environmental correlates of bat species richness in southern Africa: Effects of model selection and taxonomy

    Directory of Open Access Journals (Sweden)

    M. Corrie SCHOEMAN, F. P. D. (Woody COTTERILL, Peter J. TAYLOR, Ara MONADJEM

    2013-06-01

    Full Text Available We tested the prediction that at coarse spatial scales, variables associated with climate, energy, and productivity hypotheses should be better predictor(s of bat species richness than those associated with environmental heterogeneity. Distribution ranges of 64 bat species were estimated with niche-based models informed by 3629 verified museum specimens. The influence of environmental correlates on bat richness was assessed using ordinary least squares regression (OLS, simultaneous autoregressive models (SAR, conditional autoregressive models (CAR, spatial eigenvector-based filtering models (SEVM, and Classification and Regression Trees (CART. To test the assumption of stationarity, Geographically Weighted Regression (GWR was used. Bat species richness was highest in the eastern parts of southern Africa, particularly in central Zimbabwe and along the western border of Mozambique. We found support for the predictions of both the habitat heterogeneity and climate/productivity/ energy hypotheses, and as we expected, support varied among bat families and model selection. Richness patterns and predictors of Miniopteridae and Pteropodidae clearly differed from those of other bat families. Altitude range was the only independent variable that was sig­nificant in all models and it was most often the best predictor of bat richness. Standard coefficients of SAR and CAR models were similar to those of OLS models, while those of SEVM models differed. Although GWR indicated that the assumption of stationa­rity was violated, the CART analysis corroborated the findings of the curve-fitting models. Our results identify where additional data on current species ranges, and future conservation action and ecological work are needed [Current Zoology 59 (3: 279–293, 2013].

  13. First record of bat-pollination in the species-rich genus Tillandsia (Bromeliaceae).

    Science.gov (United States)

    Aguilar-Rodríguez, Pedro Adrián; MacSwiney G, M Cristina; Krömer, Thorsten; García-Franco, José G; Knauer, Anina; Kessler, Michael

    2014-05-01

    Bromeliaceae is a species-rich neotropical plant family that uses a variety of pollinators, principally vertebrates. Tillandsia is the most diverse genus, and includes more than one-third of all bromeliad species. Within this genus, the majority of species rely on diurnal pollination by hummingbirds; however, the flowers of some Tillandsia species show some characteristics typical for pollination by nocturnal animals, particularly bats and moths. In this study an examination is made of the floral and reproductive biology of the epiphytic bromeliad Tillandsia macropetala in a fragment of humid montane forest in central Veracruz, Mexico. The reproductive system of the species, duration of anthesis, production of nectar and floral scent, as well as diurnal and nocturnal floral visitors and their effectiveness in pollination were determined. Tillandsia macropetala is a self-compatible species that achieves a higher fruit production through outcrossing. Nectar production is restricted to the night, and only nocturnal visits result in the development of fruits. The most frequent visitor (75 % of visits) and the only pollinator of this bromeliad (in 96 % of visits) was the nectarivorous bat Anoura geoffroyi (Phyllostomidae: Glossophaginae). This is the first report of chiropterophily within the genus Tillandsia. The results on the pollination biology of this bromeliad suggest an ongoing evolutionary switch from pollination by birds or moths to bats.

  14. Helminths of three species of opossums (Mammalia, Didelphidae) from Mexico

    Science.gov (United States)

    Acosta-Virgen, Karla; López-Caballero, Jorge; García-Prieto, Luis; Mata-López, Rosario

    2015-01-01

    Abstract From August 2011 to November 2013, 68 opossums (8 Didelphis sp., 40 Didelphis virginiana, 15 Didelphis marsupialis, and 5 Philander opossum) were collected in 18 localities from 12 Mexican states. A total of 12,188 helminths representing 21 taxa were identified (6 trematodes, 2 cestodes, 3 acanthocephalans and 10 nematodes). Sixty-six new locality records, 9 new host records, and one species, the trematode Brachylaima didelphus, is added to the composition of the helminth fauna of the opossums in Mexico. These data, in conjunction with previous records, bring the number of taxa parasitizing the Mexican terrestrial marsupials to 41. Among these species, we recognized a group of helminths typical of didelphids in other parts of the Americas. This group is constituted by the trematode Rhopalias coronatus, the acanthocephalan Oligacanthorhynchus microcephalus and the nematodes Cruzia tentaculata, Gnathostoma turgidum, and Turgida turgida. In general, the helminth fauna of each didelphid species showed a stable taxonomic composition with respect to previously sampled sites. This situation suggests that the rate of accumulation of helminth species in the inventory of these 3 species of terrestrial marsupials in the Neotropical portion of Mexico is decreasing; however, new samplings in the Nearctic portion of this country will probably increase the richness of the helminthological inventory of this group of mammals. PMID:26257556

  15. Helminths of three species of opossums (Mammalia, Didelphidae from Mexico

    Directory of Open Access Journals (Sweden)

    Karla Acosta-Virgen

    2015-07-01

    Full Text Available From August 2011 to November 2013, 68 opossums (8 Didelphis sp., 40 Didelphis virginiana, 15 Didelphis marsupialis, and 5 Philander opossum were collected in 18 localities from 12 Mexican states. A total of 12,188 helminths representing 21 taxa were identified (6 trematodes, 2 cestodes, 3 acanthocephalans and 10 nematodes. Sixty-six new locality records, 9 new host records, and one species, the trematode Brachylaima didelphus, is added to the composition of the helminth fauna of the opossums in Mexico. These data, in conjunction with previous records, bring the number of taxa parasitizing the Mexican terrestrial marsupials to 41. Among these species, we recognized a group of helminths typical of didelphids in other parts of the Americas. This group is constituted by the trematode Rhopalias coronatus, the acanthocephalan Oligacanthorhynchus microcephalus and the nematodes Cruzia tentaculata, Gnathostoma turgidum, and Turgida turgida. In general, the helminth fauna of each didelphid species showed a stable taxonomic composition with respect to previously sampled sites. This situation suggests that the rate of accumulation of helminth species in the inventory of these 3 species of terrestrial marsupials in the Neotropical portion of Mexico is decreasing; however, new samplings in the Nearctic portion of this country will probably increase the richness of the helminthological inventory of this group of mammals.

  16. Vector species richness increases haemorrhagic disease prevalence through functional diversity modulating the duration of seasonal transmission.

    Science.gov (United States)

    Park, Andrew W; Cleveland, Christopher A; Dallas, Tad A; Corn, Joseph L

    2016-06-01

    Although many parasites are transmitted between hosts by a suite of arthropod vectors, the impact of vector biodiversity on parasite transmission is poorly understood. Positive relationships between host infection prevalence and vector species richness (SR) may operate through multiple mechanisms, including (i) increased vector abundance, (ii) a sampling effect in which species of high vectorial capacity are more likely to occur in species-rich communities, and (iii) functional diversity whereby communities comprised species with distinct phenologies may extend the duration of seasonal transmission. Teasing such mechanisms apart is impeded by a lack of appropriate data, yet could highlight a neglected role for functional diversity in parasite transmission. We used statistical modelling of extensive host, vector and microparasite data to test the hypothesis that functional diversity leading to longer seasonal transmission explained variable levels of disease in a wildlife population. We additionally developed a simple transmission model to guide our expectation of how an increased transmission season translates to infection prevalence. Our study demonstrates that vector SR is associated with increased levels of disease reporting, but not via increases in vector abundance or via a sampling effect. Rather, the relationship operates by extending the length of seasonal transmission, in line with theoretical predictions.

  17. Transport of Iodine Species in the Terrestrial Environment

    International Nuclear Information System (INIS)

    Hu, Q; Moran, J E; Zhao, P

    2003-01-01

    The fate and transport of iodine in the environment is of interest because of the large production and release of 129 I from anthropogenic sources. 129 I has a long half-life (1.57 x 10 7 years) and exhibits complex geochemical behavior. The main source of 129 I in the environment is from nuclear fuel reprocessing facilities; about 2,600 kg from facilities in England and France. During 1944-1972, the Hanford Site in Washington state released about 260 kg 129 I. Iodine has a unique and complex chemistry in the environment, and its fate and transport in aqueous environments is dictated by its chemical speciation. In reducing environments, aqueous iodine usually occurs as the highly mobile iodide anion (I - ). Under more oxidizing conditions, iodine may be present as the more reactive iodate anion (IO 3 - ), which could lead to retarded transport through interaction with clays and organic matter. Co-existing iodine species (I - , IO 3 - , I 2 , and organoiodine compounds), in different proportions, has been reported in various terrestrial environments. However, there are conflicting reports regarding the environmental behavior of the different types of inorganic iodine and few publications on organic iodine compounds. This work examines the sorption and transport behavior of both inorganic and organic iodine species in geological samples from several complexes of the U.S. Department of Energy, where transport of radionuclides, including 129 I, may occur. Experiments on soils and sediments from the Savannah River Site in South Carolina, Oak Ridge Site in Tennessee, Hanford Site in Washington, Livermore Site 300 in California, and a surface soil from Santa Fe in New Mexico near Los Alamos were carried out. Samples from Savannah River Site and Livermore Site 300 are available from different depths. In addition, a surface soil of Wisconsin with a high amount of organic matter is utilized. This wide variety of sample types provides opportunities to examine the influence of

  18. South African red data book - Terrestrial mammals

    CSIR Research Space (South Africa)

    Smithers, RHN

    1986-01-01

    Full Text Available Currently, 243 species of terrestrial wild mammals are known to occur in the Republic of South Africa. Using the well established IUCN definitions, 42 of these may be considered as exposed to some level of threat of extinction. Three species...

  19. Bats prove to be rich reservoirs for emerging viruses

    Science.gov (United States)

    Calisher, Charles H.; Holmes, Kathryn V.; Dominguez, Samuel R.; Schountz, Tony; Cryan, Paul M.

    2008-01-01

    Emerging pathogens, many of them viruses, continue to surprise us, providing many newly recognized diseases to study and to try to control. Many of these emergent viruses are zoonotic, transmitted from reservoirs in wild or domestic animals to humans, either by insect vectors or by exposure to the droppings or tissues of such animals. One rich- but, until recently, underappreciated-source of emergent viruses is bats (Chiroptera, meaning "hand wing"). Accounting for 1,116, or nearly one fourth, of the 4,600 recognized species of mammals, bats are grouped into two suborders Megachiroptera, which contains a single family, Pteropodidae, consisting of 42 genera and 186 species, and Microchiroptera, which contains 17 families, 160 genera, and 930 species. Although bats are among the most abundant, diverse, and geographically dispersed orders of terrestrial mammals, research on these flying mammals historically focused more on their habits and outward characteristics than on their role in carrying microorganisms and transmitting pathogens to other species. Even in those cases where bats were known to carry particular pathogens, the microbiologists who studied those pathogens typically knew little about the bat hosts. Hence, investigators now are seeking to explain how variations of anatomy, physiology, ecology, and behavior influence the roles of bats as hosts for viral pathogens.

  20. Food-chain transfer of cadmium and zinc from contaminated Urtica dioica to Helix aspersa and Lumbricus terrestris.

    Science.gov (United States)

    Sinnett, Danielle E; Hodson, Mark E; Hutchings, Tony R

    2009-08-01

    The present study examines the potential of Urtica dioica as an ecologically relevant species for use in ecotoxicological testing. It is prevalent in degraded ecosystems and is a food source for invertebrates. Urtica dioica grown in hydroponic solutions containing from less than 0.003 to 5.7 mg Cd/L or from 0.02 to 41.9 mg Zn/L accumulated metals resulting in leaf tissue concentrations in the range of 0.10 to 24.9 mg Cd/kg or 22.5 to 2,772.0 mg Zn/kg. No toxicological effects were apparent except at the highest concentrations tested, suggesting that this species may be an important pathway for transfer of metals to primary plant consumers. Helix aspersa and Lumbricus terrestris were fed the Cd- and Zn-rich leaves of U. dioica for six and four weeks, respectively. Cadmium and Zn body load increased with increasing metal concentration in the leaves (p nettle leaves with concentrations of approximately 23 mg Cd/kg and 3,400 mg Zn/kg. Models demonstrate that L. terrestris Cd tissue concentrations (r2 = 0.74, p < 0.001) and H. aspersa Zn tissue concentrations (r(2) = 0.69, p < 0.001) can be estimated from concentrations of Cd and Zn within the leaves of U. dioica and suggest that reasonably reproducible results can be obtained using these species for ecotoxicological testing.

  1. Species richness and abundance of bats in fragments of the stational semidecidual forest, Upper Paraná River, southern Brazil

    Directory of Open Access Journals (Sweden)

    H. Ortêncio-Filho

    Full Text Available The Upper Paraná River floodplain is inserted in a region of the Mata Atlântica biome, which is a critical area to preserve. Due to the scarcity of researches about the chiropterofauna in this region, the present study investigated species richness and abundance of bats in remnants from the stational semidecidual forest of the Upper Paraná River, southern Brazil. Samplings were taken every month, from January to December 2006, using 32 mist nets with 8.0 x 2.5 m, resulting in 640 m²/h and totaling a capture effort of 87,040 m²/h. In order to estimate the species richness, the following estimators were employed Chao1 and Jack2. During the study, a total of 563 individuals belonging to 17 species (Artibeus planirostris, Artibeus lituratus, Carollia perspicillata, Platyrrhinus lineatus, Sturnira lilium, Artibeus fimbriatus, Myotis nigricans, Desmodus rotundus, Artibeus obscurus, Noctilio albiventris, Phylostomus discolor, Phylostomus hastatus, Chrotopterus auritus, Lasiurus ega, Chiroderma villosum, Pygoderma bilabiatum and Lasiurus blossevillii were captured. The estimated richness curves tended to stabilize, indicating that most of the species were sampled. Captured species represented 10% of the taxa recorded in Brazil and 28% in Paraná State, revealing the importance of this area for the diversity of bats. These findings indicate the need to determine actions aiming to restrict human activities in these forest fragments, in order to minimize anthropogenic impacts on the chiropterofauna.

  2. The effects of global change on the distribution, species richness and life history of European dragonflies

    DEFF Research Database (Denmark)

    Olsen, Kent

    2016-01-01

    traits such as taxonomy, habitat specificity, metabolic plasticity, and biogeographic traits such zoogeographical origin. In Paper I we describe how changes in species richness pattern across Europe correlate with range changes in different taxonomic and biogeographic groups of dragonflies. We found...... specialized species adapted to permanent running (perennial lotic) water habitats. We found that species reproducing in temporary water track climate changes better than species adapted to permanent water. In Paper III we explore the relationship between metabolic plasticity (expressed as the ability to shift...... with less metabolic plasticity. We conducted experimental ex-situ measurements of metabolic rates measured as respiration rates at 10°C and 20°C, respectively, of four Scandinavian dragonfly species. We used two species with a northern distribution, one with a southern distribution and one ubiquitous...

  3. Puncturevine (Tribulus terrestris L.: noxious weed or powerful medical herb

    Directory of Open Access Journals (Sweden)

    Zvonko Pacanoski

    2014-03-01

    Full Text Available Tribulus terrestris L., an annual dicot species of the family Zygophyllaceae, is a common herb that is often found in disturbed habitats and agricultural areas in many parts of the temperate, tropical and desert regions of the world. T. terrestris is an aggressive species that has the potential to injure livestock, reduce hay and wool values, detour recreationists and reduces plant biodivesity. The species may become troublesome because of its weedy potential. It has been declared a weed in at least 37 countries and in at least 21 crops (cotton, maize, vineyards, orchards, etc.. It is adapted to a wide range of climatic conditions and grows on a wide variety of soil types. The management of T. terrestris can be achieved by herbicide application, mechanical (hand pulling, hoeing, mulching and biological control methods. Beside its invasive potential as a noxious and troublesome weed, T. terrestris is considered highly useful herb which is used for various purposes in folk and modern medicine and sport, as well.

  4. Uranium determinations by 133Xe in terrestrial zircon, apatite and chromite; comparative study of thermal releases of fissiogenic xenon from terrestrial and meteoritic minerals

    International Nuclear Information System (INIS)

    Sakamoto, K.; Hamajima, Y.; Itoh, K.; Yamazaki, K.

    1980-01-01

    Terrestrial zircon and apatite, as examples of uranium rich refractory minerals, and chromite, also highly refractory but uranium poor, were neutron-irradiated for their 133 Xe release studies. Uranium determination by 133 Xe was found not to be successful in these refractory samples, due to incomplete fissiogenic-xenon release at 1600 deg C as revealed by stepwise heating experiment. In these terrestrial materials the high temperature release peaks appeared at >=1500 deg C, but in meteoritic whitlockite and chromite values of 1000 approximately 1200 deg C were reported. (author)

  5. Ohio USA stoneflies (Insecta, Plecoptera): species richness estimation, distribution of functional niche traits, drainage affiliations, and relationships to other states

    Science.gov (United States)

    DeWalt, R. Edward; Cao, Yong; Tweddale, Tari; Grubbs, Scott A.; Hinz, Leon; Pessino, Massimo; Robinson, Jason L.

    2012-01-01

    Abstract Ohio is an eastern USA state that historically was >70% covered in upland and mixed coniferous forest; about 60% of it glaciated by the Wisconsinan glacial episode. Its stonefly fauna has been studied in piecemeal fashion until now. The assemblage of Ohio stoneflies was assessed from over 4,000 records accumulated from 18 institutions, new collections, and trusted literature sources. Species richness totaled 102 with estimators Chao2 and ICE Mean predicting 105.6 and 106.4, respectively. Singletons and doubletons totaled 18 species. All North American families were represented with Perlidae accounted for the highest number of species at 34. The family Peltoperlidae contributed a single species. Most species had univoltine–fast life cycles with the vast majority emerging in summer, although there was a significant component of winter stoneflies. Nine United States Geological Survey hierarchical drainage units level 6 (HUC6) were used to stratify specimen data. Species richness was significantly related to the number of unique HUC6 locations, but there was no relationship with HUC6 drainage area. A nonparametric multidimensional scaling analysis found that larger HUC6s in the western part of the state had similar assemblages with lower species richness that were found to align with more savanna and wetland habitat. Other drainages having richer assemblages were aligned with upland deciduous and mixed coniferous forests of the east and south where slopes were higher. The Ohio assemblage was most similar to the well–studied fauna of Indiana (88 spp.) and Kentucky (108 spp.), two neighboring states. Many rare species and several high quality stream reaches should be considered for greater protection. PMID:22539876

  6. Ohio USA stoneflies (Insecta, Plecoptera: species richness estimation, distribution of functional niche traits, drainage affiliations, and relationships to other states

    Directory of Open Access Journals (Sweden)

    R. DeWalt

    2012-03-01

    Full Text Available Ohio is an eastern USA state that historically was >70% covered in upland and mixed coniferous forest; about 60% of it glaciated by the Wisconsinan glacial episode. Its stonefly fauna has been studied in piecemeal fashion until now. The assemblage of Ohio stoneflies was assessed from over 4,000 records accumulated from 18 institutions, new collections, and trusted literature sources. Species richness totaled 102 with estimators Chao2 and ICE Mean predicting 105.6 and 106.4, respectively. Singletons and doubletons totaled 18 species. All North American families were represented with Perlidae accounted for the highest number of species at 34. The family Peltoperlidae contributed a single species. Most species had univoltine–fast life cycles with the vast majority emerging in summer, although there was a significant component of winter stoneflies. Nine United States Geological Survey hierarchical drainage units level 6 (HUC6 were used to stratify specimen data. Species richness was significantly related to the number of unique HUC6 locations, but there was no relationship with HUC6 drainage area. A nonparametric multidimensional scaling analysis found that larger HUC6s in the western part of the state had similar assemblages with lower species richness that were found to align with more savanna and wetland habitat. Other drainagesricher assemblages were aligned with upland deciduous and mixed coniferous forests of the east and south where slopes were higher. The Ohio assemblage was most similar to the well–studied fauna of Indiana (88 spp. and Kentucky (108 spp., two neighboring states. Many rare species and several high quality stream reaches should be considered for greater protection.

  7. Insights into the historical construction of species-rich Mesoamerican seasonally dry tropical forests: the diversification of Bursera (Burseraceae, Sapindales).

    Science.gov (United States)

    De-Nova, J Arturo; Medina, Rosalinda; Montero, Juan Carlos; Weeks, Andrea; Rosell, Julieta A; Olson, Mark E; Eguiarte, Luis E; Magallón, Susana

    2012-01-01

    • Mesoamerican arid biomes epitomize neotropical rich and complex biodiversity. To document some of the macroevolutionary processes underlying the vast species richness of Mesoamerican seasonally dry tropical forests (SDTFs), and to evaluate specific predictions about the age, geographical structure and niche conservatism of SDTF-centered woody plant lineages, the diversification of Bursera is reconstructed. • Using a nearly complete Bursera species-level phylogeny from nuclear and plastid genomic markers, we estimate divergence times, test for phylogenetic and temporal diversification heterogeneity, test for geographical structure, and reconstruct habitat shifts. • Bursera became differentiated in the earliest Eocene, but diversified during independent early Miocene consecutive radiations that took place in SDTFs. The late Miocene average age of Bursera species, the presence of phylogenetic geographical structure, and its strong conservatism to SDTFs conform to expectations derived from South American SDTF-centered lineages. • The diversification of Bursera suggests that Mesoamerican SDTF richness derives from high speciation from the Miocene onwards uncoupled from habitat shifts, during a period of enhanced aridity resulting mainly from global cooling and regional rain shadows. © 2011 The Authors. New Phytologist © 2011 New Phytologist Trust.

  8. Two common species dominate the species-rich Euglossine bee fauna of an Atlantic Rainforest remnant in Pernambuco, Brazil.

    Science.gov (United States)

    Oliveira, R; Pinto, C E; Schlindwein, C

    2015-11-01

    Nowadays, the northern part of the Atlantic Rainforest of Brazil is largely destroyed and forest remnants rarely exceed 100 ha. In a 118 ha forest fragment within a state nature reserve of Pernambuco (Reserva Ecológica Gurjaú), we surveyed the orchid bee fauna (Apidae, Euglossini) using eight different scent baits to attract males. Once a month during one year, the bees were actively collected with entomological nets, from November 2002 to October 2003 by two collectors. We collected 2,908 orchid bee males belonging to 23 species, one of the highest richness values of the Northern Atlantic Rainforest. Bees of only two species, Euglossa carolina (50%) and Eulaema nigrita (25%), which occurred throughout the year, accounted for three quarter of the collected individuals. Both species are typical for open or disturbed areas. Rainforest remnants like those of Gurjaú within the predominant sugar cane monocultures in the coastal plains of the northern Atlantic Rainforest play an important role in orchid bee conservation and maintenance of biodiversity.

  9. Housing is positively associated with invasive exotic plant species richness in New England, USA.

    Science.gov (United States)

    Gavier-Pizarro, Gregorio I; Radeloff, Volker C; Stewart, Susan I; Huebner, Cynthia D; Keuler, Nicholas S

    2010-10-01

    Understanding the factors related to invasive exotic species distributions at broad spatial scales has important theoretical and management implications, because biological invasions are detrimental to many ecosystem functions and processes. Housing development facilitates invasions by disturbing land cover, introducing nonnative landscaping plants, and facilitating dispersal of propagules along roads. To evaluate relationships between housing and the distribution of invasive exotic plants, we asked (1) how strongly is housing associated with the spatial distribution of invasive exotic plants compared to other anthropogenic and environmental factors; (2) what type of housing pattern is related to the richness of invasive exotic plants; and (3) do invasive plants represent ecological traits associated with specific housing patterns? Using two types of regression analysis (best subset analysis and hierarchical partitioning analysis), we found that invasive exotic plant richness was equally or more strongly related to housing variables than to other human (e.g., mean income and roads) and environmental (e.g., topography and forest cover) variables at the county level across New England. Richness of invasive exotic plants was positively related to area of wildland-urban interface (WUI), low-density residential areas, change in number of housing units between 1940 and 2000, mean income, plant productivity (NDVI), and altitudinal range and rainfall; it was negatively related to forest area and connectivity. Plant life history traits were not strongly related to housing patterns. We expect the number of invasive exotic plants to increase as a result of future housing growth and suggest that housing development be considered a primary factor in plans to manage and monitor invasive exotic plant species.

  10. NOAA ESRI Grid - predictions of seabird species richness in the New York offshore planning area made by the NOAA Biogeography Branch

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset represents seabird species richness, or number of species, predictions from spatial models developed for the New York offshore spatial planning area....

  11. Understanding the extreme species richness of semi-dry grasslands in east-central Europe: a comparative approach

    Czech Academy of Sciences Publication Activity Database

    Roleček, Jan; Čornej, I. I.; Tokarjuk, A. I.

    2014-01-01

    Roč. 86, č. 1 (2014), s. 13-34 ISSN 0032-7786 R&D Projects: GA ČR(CZ) GAP504/12/0649 Institutional support: RVO:67985939 Keywords : species richness * environmental history * disjunct distribution Subject RIV: EF - Botanics Impact factor: 4.104, year: 2014

  12. Underestimation of species richness in neotropical frogs revealed by mtDNA analyses.

    Directory of Open Access Journals (Sweden)

    Antoine Fouquet

    2007-10-01

    Full Text Available Amphibians are rapidly vanishing. At the same time, it is most likely that the number of amphibian species is highly underestimated. Recent DNA barcoding work has attempted to define a threshold between intra- and inter-specific genetic distances to help identify candidate species. In groups with high extinction rates and poorly known species boundaries, like amphibians, such tools may provide a way to rapidly evaluate species richness.Here we analyse published and new 16S rDNA sequences from 60 frog species of Amazonia-Guianas to obtain a minimum estimate of the number of undescribed species in this region. We combined isolation by distance, phylogenetic analyses, and comparison of molecular distances to evaluate threshold values for the identification of candidate species among these frogs.In most cases, geographically distant populations belong to genetically highly distinct lineages that could be considered as candidate new species. This was not universal among the taxa studied and thus widespread species of Neotropical frogs really do exist, contrary to previous assumptions. Moreover, the many instances of paraphyly and the wide overlap between distributions of inter- and intra-specific distances reinforce the hypothesis that many cryptic species remain to be described. In our data set, pairwise genetic distances below 0.02 are strongly correlated with geographical distances. This correlation remains statistically significant until genetic distance is 0.05, with no such relation thereafter. This suggests that for higher distances allopatric and sympatric cryptic species prevail. Based on our analyses, we propose a more inclusive pairwise genetic distance of 0.03 between taxa to target lineages that could correspond to candidate species.Using this approach, we identify 129 candidate species, two-fold greater than the 60 species included in the current study. This leads to estimates of around 170 to 460 frog taxa unrecognized in Amazonia

  13. Re-Structuring of Marine Communities Exposed to Environmental Change: A Global Study on the Interactive Effects of Species and Functional Richness

    Science.gov (United States)

    Wahl, Martin; Link, Heike; Alexandridis, Nicolaos; Thomason, Jeremy C.; Cifuentes, Mauricio; Costello, Mark J.; da Gama, Bernardo A. P.; Hillock, Kristina; Hobday, Alistair J.; Kaufmann, Manfred J.; Keller, Stefanie; Kraufvelin, Patrik; Krüger, Ina; Lauterbach, Lars; Antunes, Bruno L.; Molis, Markus; Nakaoka, Masahiro; Nyström, Julia; bin Radzi, Zulkamal; Stockhausen, Björn; Thiel, Martin; Vance, Thomas; Weseloh, Annika; Whittle, Mark; Wiesmann, Lisa; Wunderer, Laura; Yamakita, Takehisa; Lenz, Mark

    2011-01-01

    Species richness is the most commonly used but controversial biodiversity metric in studies on aspects of community stability such as structural composition or productivity. The apparent ambiguity of theoretical and experimental findings may in part be due to experimental shortcomings and/or heterogeneity of scales and methods in earlier studies. This has led to an urgent call for improved and more realistic experiments. In a series of experiments replicated at a global scale we translocated several hundred marine hard bottom communities to new environments simulating a rapid but moderate environmental change. Subsequently, we measured their rate of compositional change (re-structuring) which in the great majority of cases represented a compositional convergence towards local communities. Re-structuring is driven by mortality of community components (original species) and establishment of new species in the changed environmental context. The rate of this re-structuring was then related to various system properties. We show that availability of free substratum relates negatively while taxon richness relates positively to structural persistence (i.e., no or slow re-structuring). Thus, when faced with environmental change, taxon-rich communities retain their original composition longer than taxon-poor communities. The effect of taxon richness, however, interacts with another aspect of diversity, functional richness. Indeed, taxon richness relates positively to persistence in functionally depauperate communities, but not in functionally diverse communities. The interaction between taxonomic and functional diversity with regard to the behaviour of communities exposed to environmental stress may help understand some of the seemingly contrasting findings of past research. PMID:21611170

  14. Local and Landscape Correlates of Spider Activity Density and Species Richness in Urban Gardens.

    Science.gov (United States)

    Otoshi, Michelle D; Bichier, Peter; Philpott, Stacy M

    2015-08-01

    Urbanization is a major threat to arthropod biodiversity and abundance due to reduction and loss of suitable natural habitat. Green spaces and small-scale agricultural areas may provide habitat and resources for arthropods within densely developed cities. We studied spider activity density (a measure of both abundance and degree of movement) and diversity in urban gardens in Santa Cruz, Santa Clara, and Monterey counties in central California, USA. We sampled for spiders with pitfall traps and sampled 38 local site characteristics for 5 mo in 19 garden sites to determine the relative importance of individual local factors. We also analyzed 16 landscape variables at 500-m and 1-km buffers surrounding each garden to determine the significance of landscape factors. We identified individuals from the most common families to species and identified individuals from other families to morphospecies. Species from the families Lycosidae and Gnaphosidae composed 81% of total adult spider individuals. Most of the significant factors that correlated with spider activity density and richness were local rather than landscape factors. Spider activity density and richness increased with mulch cover and flowering plant species, and decreased with bare soil. Thus, changes in local garden management have the potential to promote diversity of functionally important spiders in urban environments. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  15. Tree Species Richness Promotes Invertebrate Herbivory on Congeneric Native and Exotic Tree Saplings in a Young Diversity Experiment.

    Directory of Open Access Journals (Sweden)

    Annika Wein

    Full Text Available Tree diversity in forests is an important driver of ecological processes including herbivory. Empirical evidence suggests both negative and positive effects of tree diversity on herbivory, which can be, respectively, attributed to associational resistance or associational susceptibility. Tree diversity experiments allow testing for associational effects, but evidence regarding which pattern predominates is mixed. Furthermore, it is unknown if herbivory on tree species of native vs. exotic origin is influenced by changing tree diversity in a similar way, or if exotic tree species escape natural enemies, resulting in lower damage that is unrelated to tree diversity. To address these questions, we established a young tree diversity experiment in temperate southwestern Germany that uses high planting density (49 trees per plot; plot size 13 m2. The species pool consists of six congeneric species pairs of European and North American origin (12 species in total planted in monocultures and mixtures (1, 2, 4, 6 species. We assessed leaf damage by leaf-chewing insects on more than 5,000 saplings of six broadleaved tree species. Plot-level tree species richness increased leaf damage, which more than doubled from monocultures to six-species mixtures, strongly supporting associational susceptibility. However, leaf damage among congeneric native and exotic species pairs was similar. There were marked differences in patterns of leaf damage across tree genera, and only the genera likely having a predominately generalist herbivore community showed associational susceptibility, irrespective of the geographical origin of a tree species. In conclusion, an increase in tree species richness in young temperate forests may result in associational susceptibility to feeding by generalist herbivores.

  16. Evidence for the persistence of the land planarian species Microplana terrestris (Müller, 1774) (Platyhelminthes, Tricladida) in microrefugia during the Last Glacial Maximum in the northern section of the Iberian Peninsula

    NARCIS (Netherlands)

    Álvarez-Presas, M.; Mateos, E.; Vila-Farré, M.; Sluys, R.; Riutort, M.

    2012-01-01

    The land planarian species Microplana terrestris (Müller, 1774), shows a wide distribution in the north of the Iberian Peninsula, where mature humid forests can be found. Since most terrestrial planarians require the presence and good condition of wet forests to survive, a parallel evolution of the

  17. Species richness of squamate reptiles from two islands in the Mexican Pacific

    OpenAIRE

    Hernández-Salinas, Uriel; Ramírez-Bautista, Aurelio; Mata-Silva, Vicente

    2014-01-01

    Cocinas and San Pancho Islands, located in the Bay of Chamela, Jalisco, México, are two of the few remaining island ecosystems with little ecological disturbance. We studied both islands aiming to assess their reptile richness. Because the environment in Chamela is seasonal, we conducted biodiversity surveys during six samplings: three in the dry season and three in rainy season. We found a total of seven reptile species on Cocinas and San Pancho Islands representing the first description of ...

  18. Bat species richness and activity over an elevation gradient in mediterranean shrublands of Crete

    Directory of Open Access Journals (Sweden)

    Panagiotis Georgiakakis

    2010-08-01

    Full Text Available Abstract
    The effect of elevation on bat species richness and activity was investigated in shrublands of central Crete (Greece using broad-band acoustic surveys. Recordings of echolocation calls were made in 15 transects equally distributed in three distinct elevation zones (500, 1000 and 1500 m a.s.l. during spring and autumn 2007-2008. Time-expanded calls were subsequently identified with the use of quadratic discriminant functions.
    Out of 13 species recorded, Hypsugo savii, Pipistrellus kuhlii and Tadarida teniotis were the most common and abundant. Many Rhinolophus hipposideros were also recorded in all elevation zones. Thirteen species were recorded in the lower elevation zone, 7 species in the mid one and 8 species in the 1500 m a.s.l. sites. Species richness, the number of bat passes of the most abundant species, as well as the total number of bat passes were not significantly affected by elevation. In spring both species richness and bat activity were higher than in autumn, although the corresponding difference in temperature was not significant.
    The high variability in both bat activity and the number of species found per transect in each elevation zone probably depended on the presence of other habitat types in the close vicinity, while roost availability and location might also have played an important role.
    We suggest that the ability of bats to perform regular movements along the elevational gradient has to be taken in account when assessing elevational patterns in bat diversity and activity. The geology of the study area is also of considerable importance through its effect on foraging and roosting opportunities for bats.

    Riassunto
    Ricchezza specifica e attività dei chirotteri lungo un gradiente altitudinale nella macchia mediterranea di Creta
    L’effetto della quota su ricchezza in specie e

  19. Compositional Variation of Terrestrial Mantle Apatites and Implications for the Halogen and Water Budgets of the Terrestrial Mantle

    Science.gov (United States)

    Roden, M.; Patino Douce, A. E.; Chaumba, J. B.; Fleisher, C.; Yogodzinski, G. M.

    2011-12-01

    Apatite in ultramafic xenoliths from various tectonic enviroments including arc (Kamchatka), plume (Hawaii), and intraplate (Lunar Crater, Nunivak, Colorado Plateau) were analyzed by electron microprobe with the aim of characterizing the Cl and F contents, and from these measured compositions to infer the nature of fluids/melts that the apatites equilibrated with. The impetus for the study derived from the generalization of O'Reilly and Griffin (1) that mantle-derived metasomatic apatites tend to be Cl-rich and mantle-derived igneous apatites tend to be F-rich. Our work largely corroborates their generalization with Cl- and/or H2O-rich compositions characterizing the apatites from Nunivak and Kamchatka while apatites from igneous or Group II xenoliths tend to be Cl-poor and be either nearly pure fluorapatite or a mix of hydroxylapatite and fluorapatite. We attribute the Cl-rich nature of the Kamchatka apatites to formation from Cl-rich fluids generated from subducted lithosphere; however the Nunivak occurrence is far removed from subducted lithosphere and may reflect a deep seated source for Cl as also indicated by brine inclusions in diamonds, Cl-rich apatites in carbonate-bearing xenoliths and a Cl-rich signature in some plumes such as Iceland, Azores and Samoa. One curious aspect of mantle-derived apatite compositions is that xenoliths with evidence of carbonatitic metasomatism commonly have Cl-rich apatites while apatites from carbonatites are invariably Cl-poor - perhaps reflecting loss of Cl in fluids evolved from the carbonatitic magma. Apatites from Group II xenoliths at Hawaii are solid solutions between fluorapatite and hydroxylapatite and show no evidence for deep-seated Cl at Hawaii. Samples of the terrestrial mantle are almost uniformly characterized by mineral assemblages with a single Ca-rich phosphate phase but the mantles of Mars, Vesta and the Moon have two Ca-rich phosphates, apatite and volatile-poor merrillite - apatite compositions existing

  20. Intensive removal of signal crayfish (Pacifastacus leniusculus) from rivers increases numbers and taxon richness of macroinvertebrate species.

    Science.gov (United States)

    Moorhouse, Tom P; Poole, Alison E; Evans, Laura C; Bradley, David C; Macdonald, David W

    2014-02-01

    Invasive species are a major cause of species extinction in freshwater ecosystems, and crayfish species are particularly pervasive. The invasive American signal crayfish Pacifastacus leniusculus has impacts over a range of trophic levels, but particularly on benthic aquatic macroinvertebrates. Our study examined the effect on the macroinvertebrate community of removal trapping of signal crayfish from UK rivers. Crayfish were intensively trapped and removed from two tributaries of the River Thames to test the hypothesis that lowering signal crayfish densities would result in increases in macroinvertebrate numbers and taxon richness. We removed 6181 crayfish over four sessions, resulting in crayfish densities that decreased toward the center of the removal sections. Conversely in control sections (where crayfish were trapped and returned), crayfish density increased toward the center of the section. Macroinvertebrate numbers and taxon richness were inversely correlated with crayfish densities. Multivariate analysis of the abundance of each taxon yielded similar results and indicated that crayfish removals had positive impacts on macroinvertebrate numbers and taxon richness but did not alter the composition of the wider macroinvertebrate community. Synthesis and applications: Our results demonstrate that non-eradication-oriented crayfish removal programmes may lead to increases in the total number of macroinvertebrates living in the benthos. This represents the first evidence that removing signal crayfish from riparian systems, at intensities feasible during control attempts or commercial crayfishing, may be beneficial for a range of sympatric aquatic macroinvertebrates.

  1. PHOTOCHEMISTRY IN TERRESTRIAL EXOPLANET ATMOSPHERES. I. PHOTOCHEMISTRY MODEL AND BENCHMARK CASES

    Energy Technology Data Exchange (ETDEWEB)

    Hu Renyu; Seager, Sara; Bains, William, E-mail: hury@mit.edu [Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139 (United States)

    2012-12-20

    We present a comprehensive photochemistry model for exploration of the chemical composition of terrestrial exoplanet atmospheres. The photochemistry model is designed from the ground up to have the capacity to treat all types of terrestrial planet atmospheres, ranging from oxidizing through reducing, which makes the code suitable for applications for the wide range of anticipated terrestrial exoplanet compositions. The one-dimensional chemical transport model treats up to 800 chemical reactions, photochemical processes, dry and wet deposition, surface emission, and thermal escape of O, H, C, N, and S bearing species, as well as formation and deposition of elemental sulfur and sulfuric acid aerosols. We validate the model by computing the atmospheric composition of current Earth and Mars and find agreement with observations of major trace gases in Earth's and Mars' atmospheres. We simulate several plausible atmospheric scenarios of terrestrial exoplanets and choose three benchmark cases for atmospheres from reducing to oxidizing. The most interesting finding is that atomic hydrogen is always a more abundant reactive radical than the hydroxyl radical in anoxic atmospheres. Whether atomic hydrogen is the most important removal path for a molecule of interest also depends on the relevant reaction rates. We also find that volcanic carbon compounds (i.e., CH{sub 4} and CO{sub 2}) are chemically long-lived and tend to be well mixed in both reducing and oxidizing atmospheres, and their dry deposition velocities to the surface control the atmospheric oxidation states. Furthermore, we revisit whether photochemically produced oxygen can cause false positives for detecting oxygenic photosynthesis, and find that in 1 bar CO{sub 2}-rich atmospheres oxygen and ozone may build up to levels that have conventionally been accepted as signatures of life, if there is no surface emission of reducing gases. The atmospheric scenarios presented in this paper can serve as the

  2. Ontogenetic shifts in terrestrial reliance of stream-dwelling brown trout

    Directory of Open Access Journals (Sweden)

    Javier Sánchez-Hernández

    2016-07-01

    Full Text Available This study focuses on terrestrial reliance of brown trout (Salmo trutta and compared it to the potential prey available (macrozoobenthos and drifting invertebrates in three temperate rivers (Galicia, NW Spain, with special emphasis on variations in terrestrial energy intake through the ontogeny of brown trout. Additionally, we paid particular attention to individual variation of terrestrial resource use within and between age classes. Prey items were grouped in four categories: i aquatic invertebrates; ii imagoes of aquatic invertebrates; iii terrestrial invertebrates; and iv fish prey. Next, energy composition was measured according to dry weight-energy equations for each individual in line with above-mentioned prey categories. Our findings illustrate that terrestrial invertebrates appeared to be scarce in the environment, whereas aquatic food resources were rather abundant and accessible. The use of terrestrial invertebrates tended to increase with age, but with a high degree of inter-individual variation in resource use. In fact, the individual reliance of brown trout on terrestrial invertebrates may vary considerably (between 0% and 76.9%. Besides, the frequency of terrestrial foragers, i.e., individuals with terrestrial invertebrates in their stomachs, increased with age, except in one population which had the maximum value in the age-2 class. The acquisition of terrestrial invertebrates thus appears to be a process strongly dependent upon the actual food availability in the environment, but with a high degree of individual variance in resource use within the same age class. Finally, we discuss that terrestrial invertebrates may largely contribute to cover the energy intake of the species, highlighting the interface between terrestrial and aquatic ecosystems, and thereby the importance of riparian canopy cover as a key factor for food supply of stream-dwelling salmonids species.

  3. [Ants’ higher taxa as surrogates of species richness in a chronosequence of fallows, old-grown forests and agroforestry systems in the Eastern Amazon, Brazil].

    Science.gov (United States)

    Muñoz Gutiérrez, Jhonatan Andrés; Roussea, Guillaume Xavier; Andrade-Silva, Joudellys; Delabie, Jacques Hubert Charles

    2017-03-01

    Deforestation in Amazon forests is one of the main causes for biodiversity loss worldwide. Ants are key into the ecosystem because act like engineers; hence, the loss of ants’ biodiversity may be a guide to measure the loss of essential functions into the ecosystems. The aim of this study was to evaluate soil ant’s richness and to estimate whether higher taxa levels (Subfamily and Genus) can be used as surrogates of species richness in different vegetation types (fallows, old-growth forests and agroforestry systems) in Eastern Amazon. The samples were taken in 65 areas in the Maranhão and Pará States in the period 2011-2014. The sampling scheme followed the procedure of Tropical Soil Biology and Fertility (TSBF). Initially, the vegetation types were characterized according to their age and estimated species richness. Linear and exponential functions were applied to evaluate if higher taxa can be used as surrogates and correlated with the Pearson coefficient. In total, 180 species distributed in 60 genera were identified. The results showed that ant species richness was higher in intermediate fallows (88) and old secondary forest (76), and was lower in agroforestry systems (38) and mature riparian forest (35). The genus level was the best surrogate to estimate the ant’s species richness across the different vegetation types, and explained 72-97 % (P agroforestry systems may contribute in the conservation of Eastern Amazon ant community.

  4. Multifaceted diversity-area relationships reveal global hotspots of mammalian species, trait and lineage diversity.

    Science.gov (United States)

    Mazel, Florent; Guilhaumon, François; Mouquet, Nicolas; Devictor, Vincent; Gravel, Dominique; Renaud, Julien; Cianciaruso, Marcus Vinicius; Loyola, Rafael Dias; Diniz-Filho, José Alexandre Felizola; Mouillot, David; Thuiller, Wilfried

    2014-08-01

    To define biome-scale hotspots of phylogenetic and functional mammalian biodiversity (PD and FD, respectively) and compare them to 'classical' hotspots based on species richness (SR) only. Global. SR, PD & FD were computed for 782 terrestrial ecoregions using distribution ranges of 4616 mammalian species. We used a set of comprehensive diversity indices unified by a recent framework that incorporates the species relative coverage in each ecoregion. We build large-scale multifaceted diversity-area relationships to rank ecoregions according to their levels of biodiversity while accounting for the effect of area on each diversity facet. Finally we defined hotspots as the top-ranked ecoregions. While ignoring species relative coverage led to a relative good congruence between biome top ranked SR, PD and FD hotspots, ecoregions harboring a rich and abundantly represented evolutionary history and functional diversity did not match with top ranked ecoregions defined by species richness. More importantly PD and FD hotspots showed important spatial mismatches. We also found that FD and PD generally reached their maximum values faster than species richness as a function of area. The fact that PD/FD reach faster their maximal value than SR may suggest that the two former facets might be less vulnerable to habitat loss than the latter. While this point is expected, it is the first time that it is quantified at global scale and should have important consequences in conservation. Incorporating species relative coverage into the delineation of multifaceted hotspots of diversity lead to weak congruence between SR, PD and FD hotspots. This means that maximizing species number may fail at preserving those nodes (in the phylogenetic or functional tree) that are relatively abundant in the ecoregion. As a consequence it may be of prime importance to adopt a multifaceted biodiversity perspective to inform conservation strategies at global scale.

  5. Terrestrial Biodiversity Analyses in Dalmatia (Croatia): A Complementary Approach Using Diversity and Rarity

    Science.gov (United States)

    Jelaska, Sven D.; Nikolić, Toni; Šerić Jelaska, Lucija; Kušan, Vladimir; Peternel, Hrvoje; Gužvica, Goran; Major, Zoran

    2010-03-01

    Here we present the methodology used for terrestrial biodiversity analysis and site selection in Phase B of the UNDP/GEF COAST project. The analysis was focused on the problem of biodiversity evaluation in four Croatian counties stretching from sea level to the highest mountain in Croatia. Data on habitats, vascular flora, and fauna (mammals, birds, reptiles, amphibians, butterflies, ground beetles, and underground invertebrates) were collected and analyzed for each of the four counties. Emphasis was given to the richness of endangered species and the rarity of endemic species. Based on the spatial analyses of habitat, fauna, and flora data, four to six areas were selected from each county and ranked according to their biodiversity importance. Overlap between areas important for richness and those important for rarity was highest for data on flora (65.5%) and lowest for data on fauna (16.7%). When different data sets were compared, the lowest overlap was between flora and fauna (17.1%) and largest between fauna and habitats (23.9%). Simultaneous overlap among all three data sets was found in just 6.5% of the overall selected areas. These results suggest that less specific data, with respect to taxa threat status, could better serve as surrogate data in estimating overall biodiversity. In summary, this analysis has demonstrated that Dalmatia is a region with a high overall biodiversity that is important in a broader European context.

  6. Molecular genotyping of Colletotrichum species based on arbitrarily primed PCR, A + T-Rich DNA, and nuclear DNA analyses

    Science.gov (United States)

    Freeman, S.; Pham, M.; Rodriguez, R.J.

    1993-01-01

    Molecular genotyping of Colletotrichum species based on arbitrarily primed PCR, A + T-rich DNA, and nuclear DNA analyses. Experimental Mycology 17, 309-322. Isolates of Colletotrichum were grouped into 10 separate species based on arbitrarily primed PCR (ap-PCR), A + T-rich DNA (AT-DNA) and nuclear DNA banding patterns. In general, the grouping of Colletotrichum isolates by these molecular approaches corresponded to that done by classical taxonomic identification, however, some exceptions were observed. PCR amplification of genomic DNA using four different primers allowed for reliable differentiation between isolates of the 10 species. HaeIII digestion patterns of AT-DNA also distinguished between species of Colletotrichum by generating species-specific band patterns. In addition, hybridization of the repetitive DNA element (GcpR1) to genomic DNA identified a unique set of Pst 1-digested nuclear DNA fragments in each of the 10 species of Colletotrichum tested. Multiple isolates of C. acutatum, C. coccodes, C. fragariae, C. lindemuthianum, C. magna, C. orbiculare, C. graminicola from maize, and C. graminicola from sorghum showed 86-100% intraspecies similarity based on ap-PCR and AT-DNA analyses. Interspecies similarity determined by ap-PCR and AT-DNA analyses varied between 0 and 33%. Three distinct banding patterns were detected in isolates of C. gloeosporioides from strawberry. Similarly, three different banding patterns were observed among isolates of C. musae from diseased banana.

  7. The origin and evolution of coral species richness in a marine biodiversity hotspot.

    Science.gov (United States)

    Huang, Danwei; Goldberg, Emma E; Chou, Loke Ming; Roy, Kaustuv

    2018-02-01

    The Coral Triangle (CT) region of the Indo-Pacific realm harbors an extraordinary number of species, with richness decreasing away from this biodiversity hotspot. Despite multiple competing hypotheses, the dynamics underlying this regional diversity pattern remain poorly understood. Here, we use a time-calibrated evolutionary tree of living reef coral species, their current geographic ranges, and model-based estimates of regional rates of speciation, extinction, and geographic range shifts to show that origination rates within the CT are lower than in surrounding regions, a result inconsistent with the long-standing center of origin hypothesis. Furthermore, endemism of coral species in the CT is low, and the CT endemics are older than relatives found outside this region. Overall, our model results suggest that the high diversity of reef corals in the CT is largely due to range expansions into this region of species that evolved elsewhere. These findings strongly support the notion that geographic range shifts play a critical role in generating species diversity gradients. They also show that preserving the processes that gave rise to the striking diversity of corals in the CT requires protecting not just reefs within the hotspot, but also those in the surrounding areas. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

  8. Species Richness and Functional Trait Diversity for Plants in Southern California's Green Infrastructure along a Climate Gradient

    Science.gov (United States)

    Rochford, M. E.; Ibsen, P.; Jenerette, D.

    2016-12-01

    Green infrastructure (GI) is greenery planted to absorb rainwater into the earth as an alternative to grey infrastructure, like storm drains. Not only does GI prevent flooding, but it also performs a number of ecosystem services, including increasing biodiversity, because it allows water to cycle through the environment naturally. Increased biodiversity in plant communities is said to help purify the air and improve the health and resilience of the plants themselves. I want to investigate these claims about GI's benefits by studying types of GI with slightly different functions. This will answer the questions 1) Are different types of green infrastructure's plant communities equally biodiverse in terms of functional trait diversity and species richness? 2) How does functional trait diversity and species richness differ along a temperature gradient in Southern California? To compare biodiversity, I must survey four different types of GI, urban parks, riparian zones, detention basins, and bioswales, in three cities in distinct climate regions. Detention basins are reservoirs lined with vegetation that collect water until it is absorbed into the soil. Bioswales are vegetated gutters that filter out pollutants in storm water. Unlike retention basins, they also add aesthetic value to an area. Even though parks are mainly for recreation and beatification rather than storm water management, they have plenty of permeable surface to absorb storm water. The types of GI that have high levels of interaction with humans should also have higher levels of maintenance. The results should follow the homogenization hypothesis and demonstrate that, regardless of climate, species richness should not differ much between highly maintained areas, like parks, in different cities. Otherwise, in GI that is not as manicured, species richness should be significantly different between cities and the different types of GI. Because types of GI selected vary in expected levels of human

  9. Tree species identity and diversity drive fungal richness and community composition along an elevational gradient in a Mediterranean ecosystem.

    Science.gov (United States)

    Saitta, Alessandro; Anslan, Sten; Bahram, Mohammad; Brocca, Luca; Tedersoo, Leho

    2018-01-01

    Ecological and taxonomic knowledge is important for conservation and utilization of biodiversity. Biodiversity and ecology of fungi in Mediterranean ecosystems is poorly understood. Here, we examined the diversity and spatial distribution of fungi along an elevational gradient in a Mediterranean ecosystem, using DNA metabarcoding. This study provides novel information about diversity of all ecological and taxonomic groups of fungi along an elevational gradient in a Mediterranean ecosystem. Our analyses revealed that among all biotic and abiotic variables tested, host species identity is the main driver of the fungal richness and fungal community composition. Fungal richness was strongly associated with tree richness and peaked in Quercus-dominated habitats and Cistus-dominated habitats. The highest taxonomic richness of ectomycorrhizal fungi was observed under Quercus ilex, whereas the highest taxonomic richness of saprotrophs was found under Pinus. Our results suggest that the effect of plant diversity on fungal richness and community composition may override that of abiotic variables across environmental gradients.

  10. Galling Insects of the Brazilian Páramos: Species Richness and Composition Along High-Altitude Grasslands.

    Science.gov (United States)

    Coelho, Marcel S; Carneiro, Marco Antônio Alves; Branco, Cristina A; Borges, Rafael Augusto Xavier; Fernandes, G Wilson

    2017-12-08

    In this work, we investigated the factors that determine the distribution of galling insects in high-altitude grasslands, locally called 'campos de altitude' of Mantiqueira Range and tested whether 1) richness of galling insects decreases with altitude, 2) galling insect richness increases with plant richness, 3) variation in galling insect diversity is predominantly a consequence of its β component, and 4) turnover is the main mechanism driving the beta diversity of both galling insects and plants. Galling insect richness did not exhibit a negative relationship with altitude, but it did increase with plant richness. The additive partition of regional richness (γ) into its local and beta components showed that local diversity (α) of galling insects and plants was relatively low in relation to regional diversity; the β component incorporated most of the regional diversity. This pattern was also found in the multiscale analysis of the additive partition for galling insects and plants. The beta diversity of galling insects and plants was driven predominantly by the process of turnover and minimally by nesting. The results reported here point out that the spatial distribution of galling insects is best explained by historical factors, such as the distribution of genera and species of key host plants, as well as their relation to habitat, than ecological effects such as hygrothermal stress - here represented by altitude. © The Authors 2017. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  11. White grubs (Coleoptera, Melolonthidae in the "Planalto Region", Rio Grande do Sul state, Brazil: Key for identification, species richness and distribution

    Directory of Open Access Journals (Sweden)

    Mariana A. Cherman

    2013-09-01

    Full Text Available White grubs (Coleoptera, Melolonthidae in the "Planalto Region", Rio Grande do Sul state, Brazil: Key for identification, species richness and distribution. The objective of this study was to survey the occurrence and geographic distribution of white grub species (Coleoptera, Melolonthidae in cultivated and non-cultivated fields of the "Planalto Region", Rio Grande do Sul state, Brazil and develop a key at genus-level. Twenty-eight species from 15 genera and three subfamilies were recorded: Dynastinae, Melolonthinae and Rutelinae. The species or genera recorded for the first time in the state are: Cyclocephala metrica, C. tucumana, Isonychus albicinctus, Liogenys bidenticeps, L. fusca, L. obesa and L. sinuaticeps, Paranomala violacea, as well as unidentified species of Amononyx, Dicrania, Leucothyreus, Macrodactylus, Plectris and Rhizogeniates. Among the species recorded, 23 were associated with winter crops. Only Cyclocephala metrica, Dyscinetus rugifrons, two species of Leucothyreus and one species of the tribe Sericini were not present in cultivated crop fields. Cyclocephala flavipennis and Diloboderus abderus occurred in most of the municipalities sampled, often associated with Plectris sp., C. modesta and C. putrida. The highest richness of melolonthids was concentrated in the northeast of the Planalto region.

  12. Shrubs as ecosystem engineers across an environmental gradient: effects on species richness and exotic plant invasion.

    Science.gov (United States)

    Kleinhesselink, Andrew R; Magnoli, Susan M; Cushman, J Hall

    2014-08-01

    Ecosystem-engineering plants modify the physical environment and can increase species diversity and exotic species invasion. At the individual level, the effects of ecosystem engineers on other plants often become more positive in stressful environments. In this study, we investigated whether the community-level effects of ecosystem engineers also become stronger in more stressful environments. Using comparative and experimental approaches, we assessed the ability of a native shrub (Ericameria ericoides) to act as an ecosystem engineer across a stress gradient in a coastal dune in northern California, USA. We found increased coarse organic matter and lower wind speeds within shrub patches. Growth of a dominant invasive grass (Bromus diandrus) was facilitated both by aboveground shrub biomass and by growing in soil taken from shrub patches. Experimental removal of shrubs negatively affected species most associated with shrubs and positively affected species most often found outside of shrubs. Counter to the stress-gradient hypothesis, the effects of shrubs on the physical environment and individual plant growth did not increase across the established stress gradient at this site. At the community level, shrub patches increased beta diversity, and contained greater rarified richness and exotic plant cover than shrub-free patches. Shrub effects on rarified richness increased with environmental stress, but effects on exotic cover and beta diversity did not. Our study provides evidence for the community-level effects of shrubs as ecosystem engineers in this system, but shows that these effects do not necessarily become stronger in more stressful environments.

  13. Myoglobin oxygen affinity in aquatic and terrestrial birds and mammals.

    Science.gov (United States)

    Wright, Traver J; Davis, Randall W

    2015-07-01

    Myoglobin (Mb) is an oxygen binding protein found in vertebrate skeletal muscle, where it facilitates intracellular transport and storage of oxygen. This protein has evolved to suit unique physiological needs in the muscle of diving vertebrates that express Mb at much greater concentrations than their terrestrial counterparts. In this study, we characterized Mb oxygen affinity (P50) from 25 species of aquatic and terrestrial birds and mammals. Among diving species, we tested for correlations between Mb P50 and routine dive duration. Across all species examined, Mb P50 ranged from 2.40 to 4.85 mmHg. The mean P50 of Mb from terrestrial ungulates was 3.72±0.15 mmHg (range 3.70-3.74 mmHg). The P50 of cetaceans was similar to terrestrial ungulates ranging from 3.54 to 3.82 mmHg, with the exception of the melon-headed whale, which had a significantly higher P50 of 4.85 mmHg. Among pinnipeds, the P50 ranged from 3.23 to 3.81 mmHg and showed a trend for higher oxygen affinity in species with longer dive durations. Among diving birds, the P50 ranged from 2.40 to 3.36 mmHg and also showed a trend of higher affinities in species with longer dive durations. In pinnipeds and birds, low Mb P50 was associated with species whose muscles are metabolically active under hypoxic conditions associated with aerobic dives. Given the broad range of potential globin oxygen affinities, Mb P50 from diverse vertebrate species appears constrained within a relatively narrow range. High Mb oxygen affinity within this range may be adaptive for some vertebrates that make prolonged dives. © 2015. Published by The Company of Biologists Ltd.

  14. Effects of habitat-forming species richness, evenness, identity, and abundance on benthic intertidal community establishment and productivity.

    Directory of Open Access Journals (Sweden)

    Julie Lemieux

    Full Text Available In a context of reduced global biodiversity, the potential impacts from the loss of habitat-forming species (HFS on ecosystem structure and functioning must be established. These species are often the main community primary producers and have a major role in the establishment of organisms through facilitation processes. This study focuses on macroalgae and mussels as HFS within an intertidal zone along the St. Lawrence estuary (Quebec, Canada. Over a 16-week period, we manipulated the in situ diversity profile (richness, evenness, identity, and abundance of the dominant HFS (Fucus distichus edentatus, F. vesiculosus, and Mytilus spp. in order to define their role in both the establishment of associated species and community primary production. Contrary to expectation, no general change in HFS richness, evenness, abundance, or identity on associated species community establishment was observed. However, over the study period, the HFS diversity profile modified the structure within the trophic guilds, which may potentially affect further community functions. Also, our results showed that the low abundance of HFS had a negative impact on the primary productivity of the community. Our results suggest that HFS diversity profiles have a limited short-term role in our study habitat and may indicate that biological forcing in these intertidal communities is less important than environmental conditions. As such, there was an opportunistic establishment of species that ensured rapid colonization regardless of the absence, or the diversity profile, of facilitators such as HFS.

  15. Simulated geographic variations of plant species richness, evenness and abundance using climatic constraints on plant functional diversity

    International Nuclear Information System (INIS)

    Kleidon, Axel; Pavlick, Ryan; Reu, Bjoern; Adams, Jonathan

    2009-01-01

    Among the most pronounced large-scale geographic patterns of plant biodiversity are the increase in plant species richness towards the tropics, a more even distribution of the relative abundances of plant species in the tropics, and a nearly log-normal relative abundance distribution. Here we use an individual-based plant diversity model that relates climatic constraints to feasible plant growth strategies to show that all three basic diversity patterns can be predicted merely from the climatic constraints acting upon plant ecophysiological trade-offs. Our model predicts that towards objectively 'harsher' environments, the range of feasible growth strategies resulting in reproductive plants is reduced, thus resulting in lower functional plant species richness. The reduction of evenness is attributed to a more rapid decline in productivity from the most productive to less productive plant growth strategies since the particular setup of the strategy becomes more important in maintaining high productivity in harsher environments. This approach is also able to reproduce the increase in the deviation from a log-normal distribution towards more evenly distributed communities of the tropics. Our results imply that these general biodiversity relationships can be understood primarily by considering the climatic constraints on plant ecophysiological trade-offs.

  16. Dietary characterization of terrestrial mammals.

    Science.gov (United States)

    Pineda-Munoz, Silvia; Alroy, John

    2014-08-22

    Understanding the feeding behaviour of the species that make up any ecosystem is essential for designing further research. Mammals have been studied intensively, but the criteria used for classifying their diets are far from being standardized. We built a database summarizing the dietary preferences of terrestrial mammals using published data regarding their stomach contents. We performed multivariate analyses in order to set up a standardized classification scheme. Ideally, food consumption percentages should be used instead of qualitative classifications. However, when highly detailed information is not available we propose classifying animals based on their main feeding resources. They should be classified as generalists when none of the feeding resources constitute over 50% of the diet. The term 'omnivore' should be avoided because it does not communicate all the complexity inherent to food choice. Moreover, the so-called omnivore diets actually involve several distinctive adaptations. Our dataset shows that terrestrial mammals are generally highly specialized and that some degree of food mixing may even be required for most species.

  17. Species richness and structure of an anuran community in an Atlantic Forest site in southern Brazil

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    Adriele Karlokoski Cunha

    2010-06-01

    Full Text Available The species richness and spatial distribution of an anuran community were studied over 12 months in an Atlantic Forest area in São José dos Pinhais Municipality, Paraná State, southern Brazil. During field surveys, we registered 32 species from ten families: Brachycephalidae (2, Bufonidae (2, Centrolenidae (1, Cycloramphidae (1, Hemiphractidae (1, Hylidae (18, Hylodidae (1, Leiuperidae (2, Leptodactylidae (3, and Microhylidae (1. Sixteen species were registered in open areas, while seventeen species were found on forest borders and twenty species in forest areas. In relation to the microhabitat utilization, species were registered according to stratum of vocalization: 1 on the ground (eight; 2 in the water (two; 3 in the lower stratum (eleven; 4 in the intermediate stratum (five; 5 in the upper stratum (four. Five species were abundant (15.6%, while twelve were common (37.5%, and fifteen were considered rare (46.9%. The biological aspects of the majority of the species described in this work as related to forest areas are not well known. This fact reinforces the importance of Atlantic Forest conservation.

  18. THE COMPOSITIONAL DIVERSITY OF EXTRASOLAR TERRESTRIAL PLANETS. II. MIGRATION SIMULATIONS

    International Nuclear Information System (INIS)

    Carter-Bond, Jade C.; O'Brien, David P.; Raymond, Sean N.

    2012-01-01

    Prior work has found that a variety of terrestrial planetary compositions are expected to occur within known extrasolar planetary systems. However, such studies ignored the effects of giant planet migration, which is thought to be very common in extrasolar systems. Here we present calculations of the compositions of terrestrial planets that formed in dynamical simulations incorporating varying degrees of giant planet migration. We used chemical equilibrium models of the solid material present in the disks of five known planetary host stars: the Sun, GJ 777, HD4203, HD19994, and HD213240. Giant planet migration has a strong effect on the compositions of simulated terrestrial planets as the migration results in large-scale mixing between terrestrial planet building blocks that condensed at a range of temperatures. This mixing acts to (1) increase the typical abundance of Mg-rich silicates in the terrestrial planets' feeding zones and thus increase the frequency of planets with Earth-like compositions compared with simulations with static giant planet orbits, and (2) drastically increase the efficiency of the delivery of hydrous phases (water and serpentine) to terrestrial planets and thus produce waterworlds and/or wet Earths. Our results demonstrate that although a wide variety of terrestrial planet compositions can still be produced, planets with Earth-like compositions should be common within extrasolar planetary systems.

  19. Carrying capacity for species richness as context for conservation: a case study of North American birds

    Science.gov (United States)

    Andrew J. Hansen; Linda Bowers Phillips; Curtis H. Flather; Jim Robinson-Cox

    2011-01-01

    We evaluated the leading hypotheses on biophysical factors affecting species richness for Breeding Bird Survey routes from areas with little influence of human activities.We then derived a best model based on information theory, and used this model to extrapolate SK across North America based on the biophysical predictor variables. The predictor variables included the...

  20. The paradox of long-term ungulate impact: increase of plant species richness in a temperate forest

    Czech Academy of Sciences Publication Activity Database

    Vild, Ondřej; Hédl, Radim; Kopecký, Martin; Szabó, Péter; Suchánková, Silvie; Zouhar, V.

    2017-01-01

    Roč. 20, č. 2 (2017), s. 282-292 ISSN 1402-2001 R&D Projects: GA AV ČR IAA600050812 EU Projects: European Commission(XE) 278065 - LONGWOOD Institutional support: RVO:67985939 Keywords : plant-herbivore interactions * vegetation resurvey * species richness Subject RIV: EH - Ecology, Behaviour OBOR OECD: Ecology Impact factor: 2.474, year: 2016

  1. Habitats at Risk. Global Warming and Species Loss in Globally Significant Terrestrial Ecosystems

    International Nuclear Information System (INIS)

    Malcolm, J.R.; Liu, Canran; Miller, L.B.; Allnutt, T.; Hansen, L.

    2002-02-01

    In this study, a suite of models of global climate and vegetation change is used to investigate three important global warming-induced threats to the terrestrial Global 200 ecoregions: (1) Invasions by new habitat types (and corresponding loss of original habitat types); (2) Local changes of habitat types; (3) High rates of required species migration. Seven climate models (general circulation models or GCMs) and two vegetation models (BIOME3 and MAPSS) were used to produce 14 impact scenarios under the climate associated with a doubling of atmospheric CO2 concentrations, which is expected to occur in less than 100 years. Previous analyses indicated that most of the variation among the impact scenarios was attributable to the particular vegetation model used, hence the authors provide results separately for the two models. The models do not provide information on biodiversity per se, but instead simulate current and future potential distributions of major vegetation types (biomes) such as tundra and broadleaf tropical rain forest

  2. First record of Wolbachia in South American terrestrial isopods: prevalence and diversity in two species of Balloniscus (Crustacea, Oniscidea

    Directory of Open Access Journals (Sweden)

    Mauricio Pereira Almerão

    2012-01-01

    Full Text Available Wolbachia are endosymbiotic bacteria that commonly infect arthropods, inducing certain phenotypes in their hosts. So far, no endemic South American species of terrestrial isopods have been investigated for Wolbachia infection. In this work, populations from two species of Balloniscus (B. sellowii and B. glaber were studied through a diagnostic PCR assay. Fifteen new Wolbachia 16S rDNA sequences were detected. Wolbachia found in both species were generally specific to one population, and five populations hosted two different Wolbachia 16S rDNA sequences. Prevalence was higher in B. glaber than in B. sellowii, but uninfected populations could be found in both species. Wolbachia strains from B. sellowii had a higher genetic variation than those isolated from B. glaber. AMOVA analyses showed that most of the genetic variance was distributed among populations of each species rather than between species, and the phylogenetic analysis suggested that Wolbachia strains from Balloniscus cluster within Supergroup B, but do not form a single monophyletic clade, suggesting multiple infections for this group. Our results highlight the importance of studying Wolbachia prevalence and genetic diversity in Neotropical species and suggest that South American arthropods may harbor a great number of diverse strains, providing an interesting model to investigate the evolution of Wolbachia and its hosts.

  3. High species richness of native pollinators in Brazilian tomato crops

    Directory of Open Access Journals (Sweden)

    C. M. Silva-Neto

    Full Text Available Abstract Pollinators provide an essential service to natural ecosystems and agriculture. In tomatoes flowers, anthers are poricidal, pollen may drop from their pore when flowers are shaken by the wind. However, bees that vibrate these anthers increase pollen load on the stigma and in fruit production. The present study aimed to identify the pollinator richness of tomato flowers and investigate their morphological and functional traits related to the plant-pollinator interaction in plantations of Central Brazil. The time of anthesis, flower duration, and the number and viability of pollen grains and ovules were recorded. Floral visitors were observed and collected. Flower buds opened around 6h30 and closed around 18h00. They reopened on the following day at the same time in the morning, lasting on average 48 hours. The highest pollen availability occurred during the first hours of anthesis. Afterwards, the number of pollen grains declined, especially between 10h00 to 12h00, which is consistent with the pollinator visitation pattern. Forty bee species were found in the tomato fields, 30 of which were considered pollinators. We found that during the flowering period, plants offered an enormous amount of pollen to their visitors. These may explain the high richness and amount of bees that visit the tomato flowers in the study areas. The period of pollen availability and depletion throughout the day overlapped with the bees foraging period, suggesting that bees are highly effective in removing pollen grains from anthers. Many of these grains probably land on the stigma of the same flower, leading to self-pollination and subsequent fruit development. Native bees (Exomalopsis spp. are effective pollinators of tomato flowers and are likely to contribute to increasing crop productivity. On the other hand, here tomato flowers offer large amounts of pollen resource to a high richness and amount of bees, showing a strong plant-pollinator interaction in the

  4. High species richness of native pollinators in Brazilian tomato crops.

    Science.gov (United States)

    Silva-Neto, C M; Bergamini, L L; Elias, M A S; Moreira, G L; Morais, J M; Bergamini, B A R; Franceschinelli, E V

    2017-01-01

    Pollinators provide an essential service to natural ecosystems and agriculture. In tomatoes flowers, anthers are poricidal, pollen may drop from their pore when flowers are shaken by the wind. However, bees that vibrate these anthers increase pollen load on the stigma and in fruit production. The present study aimed to identify the pollinator richness of tomato flowers and investigate their morphological and functional traits related to the plant-pollinator interaction in plantations of Central Brazil. The time of anthesis, flower duration, and the number and viability of pollen grains and ovules were recorded. Floral visitors were observed and collected. Flower buds opened around 6h30 and closed around 18h00. They reopened on the following day at the same time in the morning, lasting on average 48 hours. The highest pollen availability occurred during the first hours of anthesis. Afterwards, the number of pollen grains declined, especially between 10h00 to 12h00, which is consistent with the pollinator visitation pattern. Forty bee species were found in the tomato fields, 30 of which were considered pollinators. We found that during the flowering period, plants offered an enormous amount of pollen to their visitors. These may explain the high richness and amount of bees that visit the tomato flowers in the study areas. The period of pollen availability and depletion throughout the day overlapped with the bees foraging period, suggesting that bees are highly effective in removing pollen grains from anthers. Many of these grains probably land on the stigma of the same flower, leading to self-pollination and subsequent fruit development. Native bees (Exomalopsis spp.) are effective pollinators of tomato flowers and are likely to contribute to increasing crop productivity. On the other hand, here tomato flowers offer large amounts of pollen resource to a high richness and amount of bees, showing a strong plant-pollinator interaction in the study agroecosystem.

  5. STUDY OF ANTIBACTERIAL EFFECT OF TRIBULUS TERRESTRIS EXTRACT.

    OpenAIRE

    Mohanad H. Hussein.

    2018-01-01

    This study was designed to evaluated antimicrobial activity of Tribulus terrestris aqueous extract against some pathogenic microorganisms. So that, the aqueous extract of Tribulus terrestris was screened for its anti-microbial activity using the plate agar diffusion method. It was tested against four bacteria species; two Gram-positive bacteria (Bacillus subtilis, and Staphylococcus aureus) and two Gram-negative bacteria (Escherichia coli and Pseudomonas aeruginosa). The susceptibility of the...

  6. Richness, geographic distribution and ecological aspects of the fern community within the Murici Ecological Station in the state of Alagoas, Brazil

    Directory of Open Access Journals (Sweden)

    Anna Flora de Novaes Pereira

    2013-12-01

    Full Text Available We conducted a floristic survey of ferns within the Murici Ecological Station (remnant of the northeastern Atlantic Forest, located near the municipalities of Messias and Murici, in the state of Alagoas, Brazil. To increase knowledge of the ferns of Alagoas, we evaluated the species occurring in the study area in terms of richness, composition, geographic distribution, similarities with species in other Brazilian biomes, regional conservation status and ecological aspects. Data were obtained from field work conducted between March 2009 and September 2010. We identified 107 species of ferns, of which 19 represent new records for Alagoas. The richest families were Pteridaceae (29 species and Polypodiaceae (22 species. The richest genera were Adiantum (15 species and Thelypteris (9 species. Most of the species sampled are widely distributed throughout Brazil and the Americas. Within the context of the northeastern Atlantic Forest, 12 species were considered endangered. Concerning the ecological aspects, 88.8% of the species identified were herbaceous, 57.9% were terrestrial and 70.0% occurred in the forest interior.

  7. Dietary species richness as a measure of food biodiversity and nutritional quality of diets

    Science.gov (United States)

    Raneri, Jessica E.; Smith, Katherine Walker; Kolsteren, Patrick; Van Damme, Patrick; Verzelen, Kaat; Penafiel, Daniela; Vanhove, Wouter; Kennedy, Gina; Hunter, Danny; Odhiambo, Francis Oduor; Ntandou-Bouzitou, Gervais; De Baets, Bernard; Ratnasekera, Disna; Ky, Hoang The; Remans, Roseline; Termote, Céline

    2018-01-01

    Biodiversity is key for human and environmental health. Available dietary and ecological indicators are not designed to assess the intricate relationship between food biodiversity and diet quality. We applied biodiversity indicators to dietary intake data from and assessed associations with diet quality of women and young children. Data from 24-hour diet recalls (55% in the wet season) of n = 6,226 participants (34% women) in rural areas from seven low- and middle-income countries were analyzed. Mean adequacies of vitamin A, vitamin C, folate, calcium, iron, and zinc and diet diversity score (DDS) were used to assess diet quality. Associations of biodiversity indicators with nutrient adequacy were quantified using multilevel models, receiver operating characteristic curves, and test sensitivity and specificity. A total of 234 different species were consumed, of which functional diversity, species richness (SR) showed stronger associations and better diagnostic properties with micronutrient adequacy. For every additional species consumed, dietary nutrient adequacy increased by 0.03 (P food biodiversity in diets. PMID:29255049

  8. Chemistry in an evolving protoplanetary disk: Effects on terrestrial planet composition

    International Nuclear Information System (INIS)

    Moriarty, John; Fischer, Debra; Madhusudhan, Nikku

    2014-01-01

    The composition of planets is largely determined by the chemical and dynamical evolution of the disk during planetesimal formation and growth. To predict the diversity of exoplanet compositions, previous works modeled planetesimal composition as the equilibrium chemical composition of a protoplanetary disk at a single time. However, planetesimals form over an extended period of time, during which elements sequentially condense out of the gas as the disk cools and are accreted onto planetesimals. To account for the evolution of the disk during planetesimal formation, we couple models of disk chemistry and dynamics with a prescription for planetesimal formation. We then follow the growth of these planetesimals into terrestrial planets with N-body simulations of late-stage planet formation to evaluate the effect of sequential condensation on the bulk composition of planets. We find that our model produces results similar to those of earlier models for disks with C/O ratios close to the solar value (0.54). However, in disks with C/O ratios greater than 0.8, carbon-rich planetesimals form throughout a much larger radial range of the disk. Furthermore, our model produces carbon-rich planetesimals in disks with C/O ratios as low as ∼0.65, which is not possible in the static equilibrium chemistry case. These results suggest that (1) there may be a large population of short-period carbon-rich planets around moderately carbon-enhanced stars (0.65 < C/O < 0.8) and (2) carbon-rich planets can form throughout the terrestrial planet region around carbon-rich stars (C/O > 0.8).

  9. A comparative analysis of terrestrial arthropod assemblages from a relict forest unveils historical extinctions and colonization differences between two oceanic islands

    Science.gov (United States)

    Matthews, Thomas J.; Rego, Carla; Crespo, Luis; Aguiar, Carlos A. S.; Cardoso, Pedro; Rigal, François; Silva, Isamberto; Pereira, Fernando; Borges, Paulo A. V.; Serrano, Artur R. M.

    2018-01-01

    During the last few centuries oceanic island biodiversity has been drastically modified by human-mediated activities. These changes have led to the increased homogenization of island biota and to a high number of extinctions lending support to the recognition of oceanic islands as major threatspots worldwide. Here, we investigate the impact of habitat changes on the spider and ground beetle assemblages of the native forests of Madeira (Madeira archipelago) and Terceira (Azores archipelago) and evaluate its effects on the relative contribution of rare endemics and introduced species to island biodiversity patterns. We found that the native laurel forest of Madeira supported higher species richness of spiders and ground beetles compared with Terceira, including a much larger proportion of indigenous species, particularly endemics. In Terceira, introduced species are well-represented in both terrestrial arthropod taxa and seem to thrive in native forests as shown by the analysis of species abundance distributions (SAD) and occupancy frequency distributions (OFD). Low abundance range-restricted species in Terceira are mostly introduced species dispersing from neighbouring man-made habitats while in Madeira a large number of true rare endemic species can still be found in the native laurel forest. Further, our comparative analysis shows striking differences in species richness and composition that are due to the geographical and geological particularities of the two islands, but also seem to reflect the differences in the severity of human-mediated impacts between them. The high proportion of introduced species, the virtual absence of rare native species and the finding that the SADs and OFDs of introduced species match the pattern of native species in Terceira suggest the role of man as an important driver of species diversity in oceanic islands and add evidence for an extensive and severe human-induced species loss in the native forests of Terceira. PMID:29694360

  10. Long-term monitoring data provide evidence of declining species richness in a river valued for biodiversity conservation

    Science.gov (United States)

    Freeman, Mary C.; Hagler, Megan M.; Bumpers, Phillip M.; Wheeler, Kit; Wengerd, Seth J.; Freeman, Byron J.

    2017-01-01

    Free-flowing river segments provide refuges for many imperiled aquatic biota that have been extirpated elsewhere in their native ranges. These biodiversity refuges are also foci of conservation concerns because species persisting within isolated habitat fragments may be particularly vulnerable to local environmental change. We have analyzed long-term (14- and 20-y) survey data to assess evidence of fish species declines in two southeastern U.S. rivers where managers and stakeholders have identified potentially detrimental impacts of current and future land uses. The Conasauga River (Georgia and Tennessee) and the Etowah River (Georgia) form free-flowing headwaters of the extensively dammed Coosa River system. These rivers are valued in part because they harbor multiple species of conservation concern, including three federally endangered and two federally threatened fishes. We used data sets comprising annual surveys for fish species at multiple, fixed sites located at river shoals to analyze occupancy dynamics and temporal changes in species richness. Our analyses incorporated repeated site-specific surveys in some years to estimate and account for incomplete species detection, and test for species-specific (rarity, mainstem-restriction) and year-specific (elevated frequencies of low- or high-flow days) covariates on occupancy dynamics. In the Conasauga River, analysis of 26 species at 13 sites showed evidence of temporal declines in colonization rates for nearly all taxa, accompanied by declining species richness. Four taxa (including one federally endangered species) had reduced occupancy across the Conasauga study sites, with three of these taxa apparently absent for at least the last 5 y of the study. In contrast, a similar fauna of 28 taxa at 10 sites in the Etowah River showed no trends in species persistence, colonization, or occupancy. None of the tested covariates showed strong effects on persistence or colonization rates in either river. Previous studies

  11. Spatial patterns of primary productivity derived from the Dynamic Habitat Indices predict patterns of species richness and distributions in the tropics

    Science.gov (United States)

    Suttidate, Naparat

    Humans are changing the Earth's ecosystems, which has profound consequences for biodiversity. To understand how species respond to these changes, biodiversity science requires accurate assessments of biodiversity. However, biodiversity assessments are still limited in tropical regions. The Dynamic Habitat Indices (DHIs), derived from satellite data, summarize dynamic patterns of annual primary productivity: (a) cumulative annual productivity, (b) minimum annual productivity, and (c) seasonal variation in productivity. The DHIs have been successfully used in temperate regions, but not yet in the tropics. My goal was to evaluate the importance of primary productivity measured via the DHIs for assessing patterns of species richness and distributions in Thailand. First, I assessed the relationships between the DHIs and tropical bird species richness. I also evaluated the complementarity of the DHIs and topography, climate, latitudinal gradients, habitat heterogeneity, and habitat area in explaining bird species richness. I found that among three DHIs, cumulative annual productivity was the most important factor in explaining bird species richness and that the DHIs outperformed other environmental variables. Second, I developed texture measures derive from DHI cumulative annual productivity, and compared them to habitat composition and fragmentation as predictors of tropical forest bird distributions. I found that adding texture measures to habitat composition and fragmentation models improved the prediction of tropical bird distributions, especially area- and edge-sensitive tropical forest bird species. Third, I predicted the effects of trophic interactions between primary productivity, prey, and predators in relation to habitat connectivity for Indochinese tigers (Panthera tigris). I found that including trophic interactions improved habitat suitability models for tigers. However, tiger habitat is highly fragmented with few dispersal corridors. I also identified

  12. Species richness, but not phylogenetic diversity, influences community biomass production and temporal stability in a re-examination of 16 grassland biodiversity studies

    NARCIS (Netherlands)

    Venail, P.; Gross, K.; Oakley, T.H.; Narwani, A.; Allan, E.; Flombaum, P.; Isbell, F.; Joshi, J.; Reich, P.B.; Tilman, D.; Ruijven, van J.; Cardinale, B.J.

    2015-01-01

    1.Hundreds of experiments have now manipulated species richness of various groups of organisms and examined how this aspect of biological diversity influences ecosystem functioning. Ecologists have recently expanded this field to look at whether phylogenetic diversity among species, often quantified

  13. Species Richness and Community Structure on a High Latitude Reef: Implications for Conservation and Management

    Directory of Open Access Journals (Sweden)

    Wayne Houston

    2011-07-01

    Full Text Available In spite of the wealth of research on the Great Barrier Reef, few detailed biodiversity assessments of its inshore coral communities have been conducted. Effective conservation and management of marine ecosystems begins with fine-scale biophysical assessments focused on diversity and the architectural species that build the structural framework of the reef. In this study, we investigate key coral diversity and environmental attributes of an inshore reef system surrounding the Keppel Bay Islands near Rockhampton in Central Queensland, Australia, and assess their implications for conservation and management. The Keppels has much higher coral diversity than previously found. The average species richness for the 19 study sites was ~40 with representatives from 68% of the ~244 species previously described for the southern Great Barrier Reef. Using scleractinian coral species richness, taxonomic distinctiveness and coral cover as the main criteria, we found that five out of 19 sites had particularly high conservation value. A further site was also considered to be of relatively high value. Corals at this site were taxonomically distinct from the others (representatives of two families were found here but not at other sites and a wide range of functionally diverse taxa were present. This site was associated with more stressful conditions such as high temperatures and turbidity. Highly diverse coral communities or biodiversity ‘hotspots’ and taxonomically distinct reefs may act as insurance policies for climatic disturbance, much like Noah’s Arks for reefs. While improving water quality and limiting anthropogenic impacts are clearly important management initiatives to improve the long-term outlook for inshore reefs, identifying, mapping and protecting these coastal ‘refugia’ may be the key for ensuring their regeneration against catastrophic climatic disturbance in the meantime.

  14. The terrestrial reptile fauna of the Abrolhos Archipelago: species list and ecological aspects.

    Science.gov (United States)

    Rocha, C F D; Dutra, G F; Vrcibradic, D; Menezes, V A

    2002-05-01

    We have studied the terrestrial reptile fauna of the Abrolhos Archipelago (a group of five islands located ca. 70 km off the southern coast of the State of Bahia, Brazil) and analyze here some of its ecological aspects such as diet, thermal ecology, activity, and some reproductive parameters. Three lizards comprise the archipelago's terrestrial reptile fauna: Tropidurus torquatus (Tropiduridae), Mabuya agilis (Scincidae), and Hemidactylus mabouia (Gekkonidae). The first two are diurnal and the latter is crepuscular/nocturnal (initiating activity at ca. 17:30). The activity period of T. torquatus extended from 5:30 to 18:30 h. Mean field body temperatures of active T. torquatus, M. agilis, and H. mabouia were, respectively, 34.0 +/- 3.7 degrees C (range 23.8-38.0 degrees C; N = 75), 34.5 +/- 2.2 degrees C (range 30.8-37.0 degrees C; N = 6), and 26.3 +/- 1.1 degrees C (range 24.8-28.0 degrees C; N = 8). The predominant prey items in the diet of T. torquatus were ants, coleopterans, and hemipterans. In the diet of M. agilis, coleopterans were the most frequent prey items. For H. mabouia, the most important dietary items were orthopterans. Clutch size of T. torquatus averaged 4.1 +/- 1.1 (range 2-6; N = 15) and was significantly related to female size (R2 = 0.618; p = 0.001; N = 15). Clutch size for H. mabouia was fixed (two) and mean litter size of the viviparous M. agilis was 3.3 +/- 0.6 (range 3-4; N = 3). Tropidurus torquatus and H. mabouia deposit their eggs under rocks in the study area, with the former burying them but not the latter; in both species, more than one female often oviposit under the same rock.

  15. Ecological impacts of tropical forest fragmentation: how consistent are patterns in species richness and nestedness?

    Science.gov (United States)

    Hill, Jane K; Gray, Michael A; Khen, Chey Vun; Benedick, Suzan; Tawatao, Noel; Hamer, Keith C

    2011-11-27

    Large areas of tropical forest now exist as remnants scattered across agricultural landscapes, and so understanding the impacts of forest fragmentation is important for biodiversity conservation. We examined species richness and nestedness among tropical forest remnants in birds (meta-analysis of published studies) and insects (field data for fruit-feeding Lepidoptera (butterflies and moths) and ants). Species-area relationships were evident in all four taxa, and avian and insect assemblages in remnants typically were nested subsets of those in larger areas. Avian carnivores and nectarivores and predatory ants were more nested than other guilds, implying that the sequential loss of species was more predictable in these groups, and that fragmentation alters the trophic organization of communities. For butterflies, the ordering of fragments to achieve maximum nestedness was by fragment area, suggesting that differences among fragments were driven mainly by extinction. In contrast for moths, maximum nestedness was achieved by ordering species by wing length; species with longer wings (implying better dispersal) were more likely to occur at all sites, including low diversity sites, suggesting that differences among fragments were driven more strongly by colonization. Although all four taxa exhibited high levels of nestedness, patterns of species turnover were also idiosyncratic, and thus even species-poor sites contributed to landscape-scale biodiversity, particularly for insects.

  16. (macro- Evolutionary ecology of parasite diversity: From determinants of parasite species richness to host diversification

    Directory of Open Access Journals (Sweden)

    Serge Morand

    2015-04-01

    Full Text Available The present review summarized the factors or determinants that may explain parasite diversity among host species and the consequences of this parasite diversity on the evolution of host-life history traits. As host–parasite interactions are asymmetrical exploited–exploiter relationships, ecological and epidemiological theories produce hypotheses to find the potential determinants of parasite species richness, while life-history theory helps for testing potential consequences on parasite diversity on the evolution of hosts. This review referred only to studies that have specifically controlled or took into account phylogenetic information illustrated with parasites of mammals. Several points needing more investigation were identified with a special emphasis to develop the metabolic theory of epidemiology.

  17. Three dimensional marine seismic survey has no measurable effect on species richness or abundance of a coral reef associated fish community

    International Nuclear Information System (INIS)

    Miller, Ian; Cripps, Edward

    2013-01-01

    Highlights: • A marine seismic survey was conducted at Scott Reef, North Western Australia. • Effects of the survey on demersal fish were gauged using underwater visual census. • There was no detectable impact of the seismic survey on species abundance. • There was no detectable impact of the seismic survey on species richness. -- Abstract: Underwater visual census was used to determine the effect of a three dimensional seismic survey on the shallow water coral reef slope associated fish community at Scott Reef. A census of the fish community was conducted on six locations at Scott Reef both before and after the survey. The census included small site attached demersal species belonging to the family Pomacentridae and larger roving demersal species belonging to the non-Pomacentridae families. These data were combined with a decade of historical data to assess the impact of the seismic survey. Taking into account spatial, temporal, spatio-temporal and observer variability, modelling showed no significant effect of the seismic survey on the overall abundance or species richness of Pomacentridae or non-Pomacentridae. The six most abundant species were also analysed individually. In all cases no detectable effect of the seismic survey was found on the abundance of these fish species at Scott Reef

  18. Guild-specific responses of avian species richness to LiDAR-derived habitat heterogeneity

    Science.gov (United States)

    Weisberg, Peter J.; Dilts, Thomas E.; Becker, Miles E.; Young, Jock S.; Wong-Kone, Diane C.; Newton, Wesley E.; Ammon, Elisabeth M.

    2014-01-01

    Ecological niche theory implies that more heterogeneous habitats have the potential to support greater biodiversity. Positive heterogeneity-diversity relationships have been found for most studies investigating animal taxa, although negative relationships also occur and the scale dependence of heterogeneity-diversity relationships is little known. We investigated multi-scale, heterogeneity-diversity relationships for bird communities in a semi-arid riparian landscape, using airborne LiDAR data to derive key measures of structural habitat complexity. Habitat heterogeneity-diversity relationships were generally positive, although the overall strength of relationships varied across avian life history guilds (R2 range: 0.03–0.41). Best predicted were the species richness indices of cavity nesters, habitat generalists, woodland specialists, and foliage foragers. Heterogeneity-diversity relationships were also strongly scale-dependent, with strongest associations at the 200-m scale (4 ha) and weakest associations at the 50-m scale (0.25 ha). Our results underscore the value of LiDAR data for fine-grained quantification of habitat structure, as well as the need for biodiversity studies to incorporate variation among life-history guilds and to simultaneously consider multiple guild functional types (e.g. nesting, foraging, habitat). Results suggest that certain life-history guilds (foliage foragers, cavity nesters, woodland specialists) are more susceptible than others (ground foragers, ground nesters, low nesters) to experiencing declines in local species richness if functional elements of habitat heterogeneity are lost. Positive heterogeneity-diversity relationships imply that riparian conservation efforts need to not only provide high-quality riparian habitat locally, but also to provide habitat heterogeneity across multiple scales.

  19. Diversity within diversity: Parasite species richness in poison frogs assessed by transcriptomics.

    Science.gov (United States)

    Santos, Juan C; Tarvin, Rebecca D; O'Connell, Lauren A; Blackburn, David C; Coloma, Luis A

    2018-08-01

    Symbionts (e.g., endoparasites and commensals) play an integral role in their host's ecology, yet in many cases their diversity is likely underestimated. Although endoparasites are traditionally characterized using morphology, sequences of conserved genes, and shotgun metagenomics, host transcriptomes constitute an underused resource to identify these organisms' diversity. By isolating non-host transcripts from host transcriptomes, individual host tissues can now simultaneously reveal their endoparasite species richness (i.e., number of different taxa) and provide insights into parasite gene expression. These approaches can be used in host taxa whose endoparasites are mostly unknown, such as those of tropical amphibians. Here, we focus on the poison frogs (Dendrobatidae) as hosts, which are a Neotropical clade known for their bright coloration and defensive alkaloids. These toxins are an effective protection against vertebrate predators (e.g., snakes and birds), bacteria, and skin-biting ectoparasites (e.g., mosquitoes); however, little is known about their deterrence against eukaryotic endoparasites. With de novo transcriptomes of dendrobatids, we developed a bioinformatics pipeline for endoparasite identification that uses host annotated RNA-seq data and set of a priori parasite taxonomic terms, which are used to mine for specific endoparasites. We found a large community of helminths and protozoans that were mostly restricted to the digestive tract and a few systemic parasites (e.g., Trypanosoma). Contrary to our expectations, all dendrobatid frogs regardless of the presence of alkaloid defenses have endoparasites, with their highest species richness located in the frog digestive tract. Some of these organisms (e.g., roundworms) might prove to be generalists, as they were not found to be co-diversifying with their frog hosts. We propose that endoparasites may escape poison frogs' chemical defenses by colonizing tissues with fewer alkaloids than the frog's skin

  20. Riparian vegetation in the alpine connectome: Terrestrial-aquatic and terrestrial-terrestrial interactions.

    Science.gov (United States)

    Zaharescu, Dragos G; Palanca-Soler, Antonio; Hooda, Peter S; Tanase, Catalin; Burghelea, Carmen I; Lester, Richard N

    2017-12-01

    Alpine regions are under increased attention worldwide for their critical role in early biogeochemical cycles, their high sensitivity to environmental change, and as repositories of natural resources of high quality. Their riparian ecosystems, at the interface between aquatic and terrestrial environments, play important geochemical functions in the watershed and are biodiversity hotspots, despite a harsh climate and topographic setting. With climate change rapidly affecting the alpine biome, we still lack a comprehensive understanding of the extent of interactions between riparian surface, lake and catchment environments. A total of 189 glacial - origin lakes were surveyed in the Central Pyrenees to test how key elements of the lake and terrestrial environments interact at different scales to shape riparian plant composition. Secondly, we evaluated how underlying ecotope features drive the formation of natural communities potentially sensitive to environmental change and assessed their habitat distribution. At the macroscale, vegetation composition responded to pan-climatic gradients altitude and latitude, which captured in a narrow geographic area the transition between large European climatic zones. Hydrodynamics was the main catchment-scale factor connecting riparian vegetation with major water fluxes, followed by topography and geomorphology. Lake sediment Mg and Pb, and water Mn and Fe contents reflected local influences from mafic bedrock and soil water saturation. Community analysis identified four keystone ecosystems: (i) damp ecotone, (ii) snow bed-silicate bedrock, (iii) wet heath, and (iv) calcareous substrate. These communities and their connections with ecotope elements could be at risk from a number of environmental change factors including warmer seasons, snow line and lowland species advancement, increased nutrient/metal input and water level fluctuations. The results imply important natural terrestrial-aquatic linkages in the riparian environment

  1. Shifting species interactions in terrestrial dryland ecosystems under altered water availability and climate change

    Science.gov (United States)

    McCluney, Kevin E.; Belnap, Jayne; Collins, Scott L.; González, Angélica L.; Hagen, Elizabeth M.; Holland, J. Nathaniel; Kotler, Burt P.; Maestre, Fernando T.; Smith, Stanley D.; Wolf, Blair O.

    2012-01-01

    Species interactions play key roles in linking the responses of populations, communities, and ecosystems to environmental change. For instance, species interactions are an important determinant of the complexity of changes in trophic biomass with variation in resources. Water resources are a major driver of terrestrial ecology and climate change is expected to greatly alter the distribution of this critical resource. While previous studies have documented strong effects of global environmental change on species interactions in general, responses can vary from region to region. Dryland ecosystems occupy more than one-third of the Earth's land mass, are greatly affected by changes in water availability, and are predicted to be hotspots of climate change. Thus, it is imperative to understand the effects of environmental change on these globally significant ecosystems. Here, we review studies of the responses of population-level plant-plant, plant-herbivore, and predator-prey interactions to changes in water availability in dryland environments in order to develop new hypotheses and predictions to guide future research. To help explain patterns of interaction outcomes, we developed a conceptual model that views interaction outcomes as shifting between (1) competition and facilitation (plant-plant), (2) herbivory, neutralism, or mutualism (plant-herbivore), or (3) neutralism and predation (predator-prey), as water availability crosses physiological, behavioural, or population-density thresholds. We link our conceptual model to hypothetical scenarios of current and future water availability to make testable predictions about the influence of changes in water availability on species interactions. We also examine potential implications of our conceptual model for the relative importance of top-down effects and the linearity of patterns of change in trophic biomass with changes in water availability. Finally, we highlight key research needs and some possible broader impacts

  2. Shifting species interactions in terrestrial dryland ecosystems under altered water availability and climate change.

    Science.gov (United States)

    McCluney, Kevin E; Belnap, Jayne; Collins, Scott L; González, Angélica L; Hagen, Elizabeth M; Nathaniel Holland, J; Kotler, Burt P; Maestre, Fernando T; Smith, Stanley D; Wolf, Blair O

    2012-08-01

    Species interactions play key roles in linking the responses of populations, communities, and ecosystems to environmental change. For instance, species interactions are an important determinant of the complexity of changes in trophic biomass with variation in resources. Water resources are a major driver of terrestrial ecology and climate change is expected to greatly alter the distribution of this critical resource. While previous studies have documented strong effects of global environmental change on species interactions in general, responses can vary from region to region. Dryland ecosystems occupy more than one-third of the Earth's land mass, are greatly affected by changes in water availability, and are predicted to be hotspots of climate change. Thus, it is imperative to understand the effects of environmental change on these globally significant ecosystems. Here, we review studies of the responses of population-level plant-plant, plant-herbivore, and predator-prey interactions to changes in water availability in dryland environments in order to develop new hypotheses and predictions to guide future research. To help explain patterns of interaction outcomes, we developed a conceptual model that views interaction outcomes as shifting between (1) competition and facilitation (plant-plant), (2) herbivory, neutralism, or mutualism (plant-herbivore), or (3) neutralism and predation (predator-prey), as water availability crosses physiological, behavioural, or population-density thresholds. We link our conceptual model to hypothetical scenarios of current and future water availability to make testable predictions about the influence of changes in water availability on species interactions. We also examine potential implications of our conceptual model for the relative importance of top-down effects and the linearity of patterns of change in trophic biomass with changes in water availability. Finally, we highlight key research needs and some possible broader impacts

  3. Application of DNA barcoding in biodiversity studies of shallow-water octocorals: molecular proxies agree with morphological estimates of species richness in Palau

    Science.gov (United States)

    McFadden, C. S.; Brown, A. S.; Brayton, C.; Hunt, C. B.; van Ofwegen, L. P.

    2014-06-01

    The application of DNA barcoding to anthozoan cnidarians has been hindered by their slow rates of mitochondrial gene evolution and the failure to identify alternative molecular markers that distinguish species reliably. Among octocorals, however, multilocus barcodes can distinguish up to 70 % of morphospecies, thereby facilitating the identification of species that are ecologically important but still very poorly known taxonomically. We tested the ability of these imperfect DNA barcodes to estimate species richness in a biodiversity survey of the shallow-water octocoral fauna of Palau using multilocus ( COI, mtMutS, 28S rDNA) sequences obtained from 305 specimens representing 38 genera of octocorals. Numbers and identities of species were estimated independently (1) by a taxonomic expert using morphological criteria and (2) by assigning sequences to molecular operational taxonomic units (MOTUs) using predefined genetic distance thresholds. Estimated numbers of MOTUs ranged from 73 to 128 depending on the barcode and distance threshold applied, bracketing the estimated number of 118 morphospecies. Concordance between morphospecies identifications and MOTUs ranged from 71 to 75 % and differed little among barcodes. For the speciose and ecologically dominant genus Sinularia, however, we were able to identify 95 % of specimens correctly simply by comparing mtMutS sequences and in situ photographs of colonies to an existing vouchered database. Because we lack a clear understanding of species boundaries in most of these taxa, numbers of morphospecies and MOTUs are both estimates of the true species diversity, and we cannot currently determine which is more accurate. Our results suggest, however, that the two methods provide comparable estimates of species richness for shallow-water Indo-Pacific octocorals. Use of molecular barcodes in biodiversity surveys will facilitate comparisons of species richness and composition among localities and over time, data that do not

  4. Magnesium-rich Basalts on Mercury

    Science.gov (United States)

    Martel, L. M. V.

    2013-05-01

    X-ray and gamma-ray spectrometers on NASA's MESSENGER spacecraft are making key measurements regarding the composition and properties of the surface of Mercury, allowing researchers to more clearly decipher the planet's formation and geologic history. The origin of the igneous rocks in the crust of Mercury is the focus of recent research by Karen Stockstill-Cahill and Tim McCoy (National Museum of Natural History, Smithsonian Institution), along with Larry Nittler and Shoshana Weider (Carnegie Institution of Washington) and Steven Hauck II (Case Western Reserve University). Using the well-known MELTS computer code Stockstill-Cahill and coauthors worked with MESSENGER-derived and rock-analog compositions to constrain petrologic models of the lavas that erupted on the surface of Mercury. Rock analogs included a partial melt of the Indarch meteorite and a range of Mg-rich terrestrial rocks. Their work shows the lavas on Mercury are most similar to terrestrial magnesian basalt (with lowered FeO content). The implications of the modeling are that Mg-rich lavas came from high-temperature sources in Mercury's mantle and erupted at high temperature with exceptionally low viscosity into thinly bedded and laterally extensive flows, concepts open to further evaluation by laboratory experiments and by geologic mapping of Mercury's surface using MESSENGER's imaging system and laser altimeter to document flow features and dimensions.

  5. Species richness of testate amoebae in different environments from the upper Paraná river floodplain (PR/MS - doi: 10.4025/actascibiolsci.v33i3.7261 Species richness of testate amoebae in different environments from the upper Paraná river floodplain (PR/MS - doi: 10.4025/actascibiolsci.v33i3.7261

    Directory of Open Access Journals (Sweden)

    Fábio Amodêo Lansac-Tôha

    2011-07-01

    Full Text Available This study evaluated the species richness of testate amoebae in the plankton from different environments of the upper Paraná river floodplain. Samplings were performed at subsurface of pelagic region from twelve environments using motorized pump and plankton net (68 µm, during four hydrological periods. We identified 67 taxa, distributed in seven families and Arcellidae, Difflugiidae and Centropyxidae were the most representative families. Higher values of species richness were observed in the lakes (connected and isolated during the flood pulses. Centropyxis aculeata, Difflugia gramem and D. pseudogramem were frequent throughout the study period. Seasonal variability of species in the channels and isolated lakes was evidenced by beta diversity. Besides that, in the rivers, extreme changes in species composition were verified during the high-water period. Our results highlight the importance of the present study to improve the knowledge about the diversity and geographic distribution of these organisms in Brazil and emphasize the importance of current flow in the displacement of testate amoebae from their preferred habitats, marginal vegetation and sediment.This study evaluated the species richness of testate amoebae in the plankton from different environments of the upper Paraná river floodplain. Samplings were performed at subsurface of pelagic region from twelve environments using motorized pump and plankton net (68 µm, during four hydrological periods. We identified 67 taxa, distributed in seven families and Arcellidae, Difflugiidae and Centropyxidae were the most representative families. Higher values of species richness were observed in the lakes (connected and isolated during the flood pulses. Centropyxis aculeata, Difflugia gramem and D. pseudogramem were frequent throughout the study period. Seasonal variability of species in the channels and isolated lakes was evidenced by beta diversity. Besides that, in the rivers, extreme

  6. Origin of the latitudinal richness gradient

    DEFF Research Database (Denmark)

    Engemann, Kristine; Sandel, Brody Steven; Enquist, Brian J.

    2015-01-01

    Spatial variation in richness patterns must be due to variation in rates of speciation, extinction, immigration and emigration. Hotspots of diversity can occur either because they are hotspots of speciation (cradles) or cold spots of extinction (museums) – two major hypotheses that make contrasting...... predictions for the phylogenetic structure of communities. We test these hypotheses by comparing centers of species richness and phylogenetic clustering for vascular plants in the New World. Range maps for 88,417 plant species were extracted from the Botanical Information and Ecology Network (BIEN) database...... and combined with the BIEN mega phylogeny of >80,000 species. We calculated the Phylogenetic Diversity Index (PDI) and Net Relatedness Index (NRI) for each cell in a 100×100 km grid using a new computationally efficient algorithm. Species richness patterns were compared to patterns of PDI and NRI. We found...

  7. Differential responses of soil bacteria, fungi, archaea and protists to plant species richness and plant functional group identity

    NARCIS (Netherlands)

    Dassen, S.; Cortois, R.; Martens, Henk; De Hollander, M.; Kowalchuk, G.A.; van der Putten, W.H.; De Deyn, G.B.

    2017-01-01

    Plants are known to influence belowground microbial community structure along their roots, but the impacts of plant species richness and plant functional group (FG) identity on microbial communities in the bulk soil are still not well understood. Here, we used 454-pyrosequencing to analyse the soil

  8. Associations of Two Ecologically Significant Social Insect Taxa in the Litter of an Amazonian Rainforest: Is There a Relationship between Ant and Termite Species Richness?

    Directory of Open Access Journals (Sweden)

    Amy L. Mertl

    2012-01-01

    Full Text Available In spite of the ecological dominance of Neotropical ants and termites, little is understood about how their interactions influence their species richness and distribution. We surveyed ground-dwelling termite and ant species in a primary rainforest in Ecuador and analyzed ecological correlates of diversity. Termite richness was positively correlated with ant richness and abundance of twig-nesting ants. We found no evidence of competition for twigs between termites and ants. No ecological factors were correlated with termite diversity although elevation and twig and log abundance influenced ant diversity. When ant richness was compared to the richness of termites employing different predator defenses, a positive correlation was found with soldierless termites, but not genera employing chemical or mechanical defense. Our results suggest that multiple ecological factors influence ant and termite diversity, and that ant predation on termites may have a greater effect than competition between ant and termites for nest sites and food sources.

  9. How long is enough to detect terrestrial animals? Estimating the minimum trapping effort on camera traps

    Directory of Open Access Journals (Sweden)

    Xingfeng Si

    2014-05-01

    Full Text Available Camera traps is an important wildlife inventory tool for estimating species diversity at a site. Knowing what minimum trapping effort is needed to detect target species is also important to designing efficient studies, considering both the number of camera locations, and survey length. Here, we take advantage of a two-year camera trapping dataset from a small (24-ha study plot in Gutianshan National Nature Reserve, eastern China to estimate the minimum trapping effort actually needed to sample the wildlife community. We also evaluated the relative value of adding new camera sites or running cameras for a longer period at one site. The full dataset includes 1727 independent photographs captured during 13,824 camera days, documenting 10 resident terrestrial species of birds and mammals. Our rarefaction analysis shows that a minimum of 931 camera days would be needed to detect the resident species sufficiently in the plot, and c. 8700 camera days to detect all 10 resident species. In terms of detecting a diversity of species, the optimal sampling period for one camera site was c. 40, or long enough to record about 20 independent photographs. Our analysis of evaluating the increasing number of additional camera sites shows that rotating cameras to new sites would be more efficient for measuring species richness than leaving cameras at fewer sites for a longer period.

  10. Disturbance alters local-regional richness relationships in appalachian forests

    Science.gov (United States)

    Belote, R.T.; Sanders, N.J.; Jones, R.H.

    2009-01-01

    Whether biological diversity within communities is limited by local interactions or regional species pools remains an important question in ecology. In this paper, we investigate how an experimentally applied tree-harvesting disturbance gradient influenced local-regional richness relationships. Plant species richness was measured at three spatial scales (2 ha = regional; 576 m2 and 1 m2 = local) on three occasions (one year pre-disturbance, one year post-disturbance, and 10 years post-disturbance) across five disturbance treatments (uncut control through clearcut) replicated throughout the southern Appalachian Mountains, USA. We investigated whether species richness in 576-m2 plots and 1-m2 subplots depended on species richness in 2-ha experimental units and whether this relationship changed through time before and after canopy disturbance. We found that, before disturbance, the relationship between local and regional richness was weak or nonexistent. One year after disturbance local richness was a positive function of regional richness, because local sites were colonized from the regional species pool. Ten years after disturbance, the positive relationship persisted, but the slope had decreased by half. These results suggest that disturbance can set the stage for strong influences of regional species pools on local community assembly in temperate forests. However, as time since disturbance increases, local controls on community assembly decouple the relationships between regional and local diversity. ?? 2009 by the Ecological Society of America.

  11. Impact of ecological doses of the most widespread phthalate on a terrestrial species, the ant Lasius niger.

    Science.gov (United States)

    Cuvillier-Hot, Virginie; Salin, Karine; Devers, Séverine; Tasiemski, Aurélie; Schaffner, Pauline; Boulay, Raphaël; Billiard, Sylvain; Lenoir, Alain

    2014-05-01

    Phthalates are synthetic contaminants released into the environment notably by plastic waste. Semi-volatile, they adsorb to atmospheric particles and get distributed in all ecosystems. Effects of this major anthropogenic pollution in economical species in aquatic habitats have attracted large interest. On the contrary, very few studies have focused on wild terrestrial species. Yet, these lipophilic molecules are easily trapped by insect cuticle; ants and other insects have been shown to permanently bear among their cuticular components a non-negligible proportion of phthalates, meaning that they suffer from chronic exposure to these pollutants. Oral route could also be an additional way of contamination, as phthalates tend to stick to any organic particle. We show here via a food choice experiment that Lasius niger workers can detect, and avoid feeding on, food contaminated with DEHP (DiEthyl Hexyl Phthalate), the most widespread phthalate found in nature. This suggests that the main source of contamination for ants is atmosphere and that doses measured on the cuticle correspond to the chronic exposure levels for these animals. Such an ecologically relevant dose of DEHP was used to contaminate ants in lab and to investigate their physiological impact. Over a chronic exposure (1 dose per week for 5 weeks), the egg-laying rate of queens was significantly reduced lending credence to endocrine disruptive properties of such a pollutant, as also described for aquatic invertebrates. On the contrary, short term exposure (24h) to a single dose of DEHP does not induce oxidative stress in ant workers as expected, but leads to activation of the immune system. Because of their very large distribution, their presence in virtually all terrestrial ecosystems and their representation at all trophic levels, ants could be useful indicators of contamination by phthalates, especially via monitoring the level of activation of their immune state. Copyright © 2014 Elsevier Inc. All

  12. Vibrational Spectroscopy of Chemical Species in Silicon and Silicon-Rich Nitride Thin Films

    Directory of Open Access Journals (Sweden)

    Kirill O. Bugaev

    2012-01-01

    Full Text Available Vibrational properties of hydrogenated silicon-rich nitride (SiN:H of various stoichiometry (0.6≤≤1.3 and hydrogenated amorphous silicon (a-Si:H films were studied using Raman spectroscopy and Fourier transform infrared spectroscopy. Furnace annealing during 5 hours in Ar ambient at 1130∘C and pulse laser annealing were applied to modify the structure of films. Surprisingly, after annealing with such high-thermal budget, according to the FTIR data, the nearly stoichiometric silicon nitride film contains hydrogen in the form of Si–H bonds. From analysis of the FTIR data of the Si–N bond vibrations, one can conclude that silicon nitride is partly crystallized. According to the Raman data a-Si:H films with hydrogen concentration 15% and lower contain mainly Si–H chemical species, and films with hydrogen concentration 30–35% contain mainly Si–H2 chemical species. Nanosecond pulse laser treatments lead to crystallization of the films and its dehydrogenization.

  13. Relative abundance and species richness of cerambycid beetles in partial cut and uncut bottomland hardwood forests

    Science.gov (United States)

    Newell, P.; King, S.

    2009-01-01

    Partial cutting techniques are increasingly advocated and used to create habitat for priority wildlife. However, partial cutting may or may not benefit species dependent on deadwood; harvesting can supplement coarse woody debris in the form of logging slash, but standing dead trees may be targeted for removal. We sampled cerambycid beetles during the spring and summer of 2006 and 2007 with canopy malaise traps in 1- and 2-year-old partial cut and uncut bottomland hardwood forests of Louisiana. We captured a total of 4195 cerambycid beetles representing 65 species. Relative abundance was higher in recent partial cuts than in uncut controls and with more dead trees in a plot. Total species richness and species composition were not different between treatments. The results suggest partial cuts with logging slash left on site increase the abundance of cerambycid beetles in the first few years after partial cutting and that both partial cuts and uncut forest should be included in the bottomland hardwood forest landscape.

  14. Weeds in Organic Fertility-Building Leys: Aspects of Species Richness and Weed Management

    Directory of Open Access Journals (Sweden)

    Thomas F. Döring

    2017-02-01

    Full Text Available Legume-based leys (perennial sod crops are an important component of fertility management in organic rotations in many parts of Europe. Despite their importance, however, relatively little is known about how these leys affect weed communities or how the specific composition of leys may contribute to weed management. To determine whether the choice of plant species in the ley affects weeds, we conducted replicated field trials at six locations in the UK over 24 months, measuring weed cover and biomass in plots sown with monocultures of 12 legume and 4 grass species, and in plots sown with a mixture of 10 legume species and 4 grass species. Additionally, we monitored weed communities in leys on 21 organic farms across the UK either sown with a mixture of the project species or the farmers’ own species mix. In total, 63 weed species were found on the farms, with the annuals Stellaria media, Sonchus arvensis, and Veronica persica being the most frequent species in the first year after establishment of the ley, while Stellaria media and the two perennials Ranunculus repens and Taraxacum officinale dominated the weed spectrum in the second year. Our study shows that organic leys constitute an important element of farm biodiversity. In both replicated and on-farm trials, weed cover and species richness were significantly lower in the second year than in the first, owing to lower presence of annual weeds in year two. In monocultures, meadow pea (Lathyrus pratensis was a poor competitor against weeds, and a significant increase in the proportion of weed biomass was observed over time, due to poor recovery of meadow pea after mowing. For red clover (Trifolium pratense, we observed the lowest proportion of weed biomass in total biomass among the tested legume species. Crop biomass and weed biomass were negatively correlated across species. Residuals from the linear regression between crop biomass and weed biomass indicated that at similar levels of crop

  15. Taiwan's industrial heavy metal pollution threatens terrestrial biota

    International Nuclear Information System (INIS)

    Hsu, M.J.; Selvaraj, K.; Agoramoorthy, G.

    2006-01-01

    The bioconcentration levels of essential (Cu, Fe, Mg, Mn, and Zn) and non-essential (As, Cd, Hg, Pb, and Sn) elements have been investigated in different terrestrial biota such as fungi, plant, earthworm, snail, crab, insect, amphibian, lizard, snake, and bat including the associated soil, to investigate the ecosystem health status in Kenting National Park, Taiwan. High bioconcentrations of Cd, Hg, and Sn in snail, earthworm, crab, lizard, snake, and bat indicated a contaminated terrestrial ecosystem. High concentrations of Cd, Hg, and Sn in plant species, effective bioaccumulation of Cd by earthworm, snail, crab and bat, as well as very high levels of Hg found in invertebrates, amphibians, and reptiles revealed a strong influence from industrial pollution on the biotic community. This study for the first time presents data on the impact of heavy metal pollution on various terrestrial organisms in Taiwan. - Metal effects occur at any terrestrial levels in Taiwan

  16. Time-lagged response of carabid species richness and composition to past management practices and landscape context of semi-natural field margins.

    Science.gov (United States)

    Alignier, Audrey; Aviron, Stéphanie

    2017-12-15

    Field margins are key features for the maintenance of biodiversity and associated ecosystem services in agricultural landscapes. Little is known about the effects of management practices of old semi-natural field margins, and their historical dimension regarding past management practices and landscape context is rarely considered. In this paper, the relative influence of recent and past management practices and landscape context (during the last five years) were assessed on the local biodiversity (species richness and composition) of carabid assemblages of field margins in agricultural landscapes of northwestern France. The results showed that recent patterns of carabid species richness and composition were best explained by management practices and landscape context measured four or five years ago. It suggests the existence of a time lag in the response of carabid assemblages to past environmental conditions of field margins. The relative contribution of past management practices and past landscape context varied depending on the spatial scale at which landscape context was taken into account. Carabid species richness was higher in grazed or sprayed field margins probably due to increased heterogeneity in habitat conditions. Field margins surrounded by grasslands and crops harbored species associated with open habitats whilst forest species dominated field margins surrounded by woodland. Landscape effect was higher at fine spatial scale, within 50 m around field margins. The present study highlights the importance of considering time-lagged responses of biodiversity when managing environment. It also suggests that old semi-natural field margins should not be considered as undisturbed habitats but more as management units being part of farming activities in agricultural landscapes, as for arable fields. Copyright © 2017 Elsevier Ltd. All rights reserved.

  17. Effects of herbivore species richness on the niche dynamics of blue sheep Pseudois nayaur in the Indian Trans-Himalaya

    NARCIS (Netherlands)

    Namgail, T.; Mishra, C.; Jong, de C.B.; Wieren, van S.E.; Prins, H.H.T.

    2009-01-01

    Aim To understand the community structure of mountain ungulates by exploring their niche dynamics in response to sympatric species richness. Location Ladakh and Spiti Regions of the Western Indian Trans-Himalaya. Methods We used the blue sheep Pseudois nayaur, a relatively widely distributed

  18. Terrestrial Fe-oxide Concretions and Mars Blueberries: Comparisons of Similar Advective and Diffusive Chemical Infiltration Reaction Mechanisms

    Science.gov (United States)

    Park, A. J.; Chan, M. A.

    2006-12-01

    Abundant iron oxide concretions occurring in Navajo Sandstone of southern Utah and those discovered at Meridiani Planum, Mars share many common observable physical traits such as their spheriodal shapes, occurrence, and distribution patterns in sediments. Terrestrial concretions are products of interaction between oxygen-rich aquifer water and basin-derived reducing (iron-rich) water. Water-rock interaction simulations show that diffusion of oxygen and iron supplied by slow-moving water is a reasonable mechanism for producing observed concretion patterns. In short, southern Utah iron oxide concretions are results of Liesegang-type diffusive infiltration reactions in sediments. We propose that the formation of blueberry hematite concretions in Mars sediments followed a similar diagenetic mechanism where iron was derived from the alteration of volcanic substrate and oxygen was provided by the early Martian atmosphere. Although the terrestrial analog differs in the original host rock composition, both the terrestrial and Mars iron-oxide precipitation mechanisms utilize iron and oxygen interactions in sedimentary host rock with diffusive infiltration of solutes from two opposite sources. For the terrestrial model, slow advection of iron-rich water is an important factor that allowed pervasive and in places massive precipitation of iron-oxide concretions. In Mars, evaporative flux of water at the top of the sediment column may have produced a slow advective mass-transfer mechanism that provided a steady source and the right quantity of iron. The similarities of the terrestrial and Martian systems are demonstrated using a water-rock interaction simulator Sym.8, initially in one-dimensional systems. Boundary conditions such as oxygen content of water, partial pressure of oxygen, and supply rate of iron were varied. The results demonstrate the importance of slow advection of water and diffusive processes for producing diagenetic iron oxide concretions.

  19. Spatial vision in Bombus terrestris

    Directory of Open Access Journals (Sweden)

    Aravin eChakravarthi

    2016-02-01

    Full Text Available Bombus terrestris is one of the most commonly used insect models to investigate visually guided behavior and spatial vision in particular. Two fundamental measures of spatial vision are spatial resolution and contrast sensitivity. In this study, we report the threshold of spatial resolution in B. terrestris and characterize the contrast sensitivity function of the bumblebee visual system for a dual choice discrimination task. We trained bumblebees in a Y-maze experimental set-up to associate a vertical sinusoidal grating with a sucrose reward, and a horizontal grating with absence of a reward. Using a logistic psychometric function, we estimated a resolution threshold of 0.21 cycles deg-1 of visual angle. This resolution is in the same range but slightly lower than that found in honeybees (Apis mellifera and A. cerana and another bumblebee species (B. impatiens. We also found that the contrast sensitivity of B. terrestris was 1.57 for the spatial frequency 0.09 cycles deg-1 and 1.26. for 0.18 cycles deg-1.

  20. Species richness and abundance of hesperioidea and papilionoidea (lepidoptera) in Las Delicias natural reserve, Santa Marta, Magdalena, Colombia

    International Nuclear Information System (INIS)

    Vargas Zapata, Maria A; Martinez Hernandez, Neis Jose; Gutierrez Moreno, Luis C and others

    2011-01-01

    In the foothills of the Sierra Nevada de Santa Marta, Colombia, are formations of dry tropical secondary forest hosting a fauna representative of lepidoptera, which can be used as an indicator of group condition, because of their sensitivity to intervention and specificity in the use of resources; in the present study the changes in richness and abundance of butterflies hesperioidea papilionoidea in nature reserve Las Delicias were evaluated. Two sampling sites with different degrees of intervention were selected. The first site is located between 400- 550 over sea level, while the second at 200 m. We performed four samples, from April to July 2008; using two networks lepidopterist and 10 van someren rydon traps baited with macerated fruit and fish. We captured 432 individuals belonging to 66 species, distributed in 52 genera. Nymphalidae were the most rich family (42) and abundance (250); highlighting the species mechanitis lysimnia fabricius (41 specimens), typical in forest with very good coverage. Site 2, was the most diverse (48) and abundance (236), because in this place there was a greater stratification and tree coverage, and the presence of water resources during the sampling. With the arrival of rain in June and July, there was greater flowering and fruiting of vegetation in the area, increasing the availability of resources and therefore a greater richness and abundance of papilionoidea and hesperioidea in the study area.

  1. Evolutionary rates of mitochondrial genomes correspond to diversification rates and to contemporary species richness in birds and reptiles

    Science.gov (United States)

    Eo, Soo Hyung; DeWoody, J. Andrew

    2010-01-01

    Rates of biological diversification should ultimately correspond to rates of genome evolution. Recent studies have compared diversification rates with phylogenetic branch lengths, but incomplete phylogenies hamper such analyses for many taxa. Herein, we use pairwise comparisons of confamilial sauropsid (bird and reptile) mitochondrial DNA (mtDNA) genome sequences to estimate substitution rates. These molecular evolutionary rates are considered in light of the age and species richness of each taxonomic family, using a random-walk speciation–extinction process to estimate rates of diversification. We find the molecular clock ticks at disparate rates in different families and at different genes. For example, evolutionary rates are relatively fast in snakes and lizards, intermediate in crocodilians and slow in turtles and birds. There was also rate variation across genes, where non-synonymous substitution rates were fastest at ATP8 and slowest at CO3. Family-by-gene interactions were significant, indicating that local clocks vary substantially among sauropsids. Most importantly, we find evidence that mitochondrial genome evolutionary rates are positively correlated with speciation rates and with contemporary species richness. Nuclear sequences are poorly represented among reptiles, but the correlation between rates of molecular evolution and species diversification also extends to 18 avian nuclear genes we tested. Thus, the nuclear data buttress our mtDNA findings. PMID:20610427

  2. Use of ephippial morphology to assess richness of anomopods: potentials and pitfalls

    Directory of Open Access Journals (Sweden)

    Luc DE MEESTER

    2004-09-01

    Full Text Available Zooplankton species richness is typically assessed through analysis of active community samples. These samples ought to be collected at many different locations in the lake and at multiple occasions throughout the year so as to cover the spatial and temporal heterogeneity in active community structure. A number of studies have shown that high numbers of species can be retrieved with a limited effort through hatching of dormant eggs isolated from lake sediments. However, dormant eggs of different species differ in their propensities to hatch, resulting in biased assessments of species composition, abundance and richness. In this paper, we explore the potentials and pitfalls of a third method to assess cladoceran species richness. For twenty European lakes, we identified the number of ephippium morphotypes in sediment samples taken on a single occasion. The morphotype richness was well correlated with species richness as assessed through hatching of dormant forms and through analysis of active community samples covering a six month period. However, not all species had a species-specific ephippial morphotype, consequently resulting in an underestimation of true species richness.

  3. Effects of natural phenomena and human activity on the species richness of endemic and non-endemic Heteroptera in the Canary Islands

    Directory of Open Access Journals (Sweden)

    Vargas, J. M.

    2004-12-01

    Full Text Available The geographical patterns of Heteroptera species diversity in the Canary Islands were analysed, and endemic and non–endemic species were studied both together and separately. Causal processes most likely controlling these patterns, as well as the theory of island biogeography, hypotheses about evolutionary time, habitat heterogeneity, climatic stability, intermediate disturbances, energy, environmental favourableness–severity, productivity and human influence were investigated. The combination of habitat heterogeneity and human influence accounted for the total number of species. However, when endemic and non–endemic species were analysed separately, habitat heterogeneity and favourableness–severity explained the richness of endemic species, whereas habitat heterogeneity and human influence explained that of non–endemic species.

  4. Lead concentrations: bats vs. terrestrial small mammals collected near a major highway

    Energy Technology Data Exchange (ETDEWEB)

    Clark, D.R.

    1979-03-01

    Lead concentrations in two species of bats and three species of terrestrial small mammals (meadow voles, short-tailed shrews, and white-footed mice) collected near a heavily travelled highway are compared. Roosting bats away from the parkway contained as much or more lead as the terrestrial mammals that were collected within 18 m of the road. Estimated doses of lead ingested by little brown bats, shrews, and voles equal or exceed doses that have caused mortality or reproductive impairment in domestic mammals. (24 references, 3 tables)

  5. Effects of soil water table regime on tree community species richness and structure of alluvial forest fragments in Southeast Brazil.

    Science.gov (United States)

    Silva, A C; Higuchi, P; van den Berg, E

    2010-08-01

    In order to determine the influence of soil water table fluctuation on tree species richness and structure of alluvial forest fragments, 24 plots were allocated in a point bar forest and 30 plots in five forest fragments located in a floodplain, in the municipality of São Sebastião da Bela Vista, Southeast Brazil, totalizing 54, 10 X 20 m, plots. The information recorded in each plot were the soil water table level, diameter at breast height (dbh), total height and botanical identity off all trees with dbh > 5 cm. The water table fluctuation was assessed through 1 m deep observation wells in each plot. Correlations analysis indicated that sites with shallower water table in the flooding plains had a low number of tree species and high tree density. Although the water table in the point bar remained below the wells during the study period, low tree species richness was observed. There are other events taking place within the point bar forest that assume a high ecological importance, such as the intensive water velocity during flooding and sedimentation processes.

  6. Effects of soil water table regime on tree community species richness and structure of alluvial forest fragments in Southeast Brazil

    Directory of Open Access Journals (Sweden)

    AC. Silva

    Full Text Available In order to determine the influence of soil water table fluctuation on tree species richness and structure of alluvial forest fragments, 24 plots were allocated in a point bar forest and 30 plots in five forest fragments located in a floodplain, in the municipality of São Sebastião da Bela Vista, Southeast Brazil, totalizing 54, 10 X 20 m, plots. The information recorded in each plot were the soil water table level, diameter at breast height (dbh, total height and botanical identity off all trees with dbh > 5 cm. The water table fluctuation was assessed through 1 m deep observation wells in each plot. Correlations analysis indicated that sites with shallower water table in the flooding plains had a low number of tree species and high tree density. Although the water table in the point bar remained below the wells during the study period, low tree species richness was observed. There are other events taking place within the point bar forest that assume a high ecological importance, such as the intensive water velocity during flooding and sedimentation processes.

  7. Survey of nematodes associated with terrestrial slugs in Norway.

    Science.gov (United States)

    Ross, J L; Ivanova, E S; Hatteland, B A; Brurberg, M B; Haukeland, S

    2016-09-01

    A survey of nematodes associated with terrestrial slugs was conducted for the first time in Norway. A total of 611 terrestrial slugs were collected from 32 sample sites. Slugs were identified by means of morphological examination, dissection of genitalia and molecular analysis using mitochondrial DNA. Twelve slug species were identified, representing four different slug families. Internal nematodes were identified by means of morphological analysis and the sequencing of the 18S rRNA gene. Of the sample sites studied, 62.5% were found to be positive for nematode parasites, with 18.7% of all slugs discovered being infected. Five nematode species were identified in this study: Alloionema appendiculatum, Agfa flexilis, Angiostoma limacis, Angiostoma sp. and Phasmarhabditis hermaphrodita. Of these species, only one nematode was previously undescribed (Angiostoma sp.). This is the first record of the presence of A. appendiculatum, A. flexilis and A. limacis in Norway.

  8. Predicting sublethal effects of herbicides on terrestrial non-crop plant species in the field from greenhouse data

    International Nuclear Information System (INIS)

    Riemens, Marleen M.; Dueck, Thom; Kempenaar, Corne

    2008-01-01

    Guidelines provided by OECD and EPPO allow the use of data obtained in greenhouse experiments in the risk assessment for pesticides to non-target terrestrial plants in the field. The present study was undertaken to investigate the predictability of effects on field-grown plants using greenhouse data. In addition, the influence of plant development stage on plant sensitivity and herbicide efficacy, the influence of the surrounding vegetation on individual plant sensitivity and of sublethal herbicide doses on the biomass, recovery and reproduction of non-crop plants was studied. Results show that in the future, it might well be possible to translate results from greenhouse experiments to field situations, given sufficient experimental data. The results also suggest consequences at the population level. Even when only marginal effects on the biomass of non-target plants are expected, their seed production and thereby survival at the population level may be negatively affected. - The response of greenhouse-grown wild plant species to herbicide exposure could be related to the response of the same species when grown in the field

  9. Sublethal effects of herbicides on the biomass and seed production of terrestrial non-crop plant species, influenced by environment, development stage and assessment date

    International Nuclear Information System (INIS)

    Riemens, Marleen M.; Dueck, Thom; Kempenaar, Corne; Lotz, Lambertus A.P.; Kropff, Martin J.J.

    2009-01-01

    Guidelines provided by the OECD and EPPO allow the use of single-species tests performed in greenhouses to assess the risk of herbicides to non-target terrestrial plant communities in the field. The present study was undertaken to investigate the use of greenhouse data to determine effects of herbicides with a different mode of action on the biomass, seed production and emergence of field-grown plants. In addition, a single species approach was compared with a mixed species approach. Effects on the biomass of greenhouse and field-grown plants were found to be related at different effect levels, indicating that it might be possible to translate results from greenhouse studies to field situations. However, the use of single-species tests may not be valid. The response of a single plant species to sublethal herbicide dosages differed to the response of the same species grown in a mixture with other species. - The use of single-species greenhouse tests in the ecological risk assessment of crop protection products may only be valid for single species in the field, not for vegetations.

  10. Chytrid fungus acts as a generalist pathogen infecting species-rich amphibian families in Brazilian rainforests.

    Science.gov (United States)

    Valencia-Aguilar, Anyelet; Ruano-Fajardo, Gustavo; Lambertini, Carolina; da Silva Leite, Domingos; Toledo, Luís Felipe; Mott, Tamí

    2015-05-11

    The fungus Batrachochytrium dendrobatidis (Bd) is among the main causes of declines in amphibian populations. This fungus is considered a generalist pathogen because it infects several species and spreads rapidly in the wild. To date, Bd has been detected in more than 100 anuran species in Brazil, mostly in the southern portion of the Atlantic forest. Here, we report survey data from some poorly explored regions; these data considerably extend current information on the distribution of Bd in the northern Atlantic forest region. In addition, we tested the hypothesis that Bd is a generalist pathogen in this biome. We also report the first positive record for Bd in an anuran caught in the wild in Amazonia. In total, we screened 90 individuals (from 27 species), of which 39 individuals (from 22 species) were Bd-positive. All samples collected in Bahia (2 individuals), Pernambuco (3 individuals), Pará (1 individual), and Minas Gerais (1 individual) showed positive results for Bd. We found a positive correlation between anuran richness per family and the number of infected species in the Atlantic forest, supporting previous observations that Bd lacks strong host specificity; of 38% of the anuran species in the Atlantic forest that were tested for Bd infection, 25% showed positive results. The results of our study exemplify the pandemic and widespread nature of Bd infection in amphibians.

  11. Seed dispersal increases local species richness and reduces spatial turnover of tropical tree seedlings.

    Science.gov (United States)

    Wandrag, Elizabeth M; Dunham, Amy E; Duncan, Richard P; Rogers, Haldre S

    2017-10-03

    Dispersal is thought to be a key process underlying the high spatial diversity of tropical forests. Just how important dispersal is in structuring plant communities is nevertheless an open question because it is very difficult to isolate dispersal from other processes, and thereby measure its effect. Using a unique situation, the loss of vertebrate seed dispersers on the island of Guam and their presence on the neighboring islands of Saipan and Rota, we quantify the contribution of vertebrate seed dispersal to spatial patterns of diversity of tree seedlings in treefall gaps. The presence of vertebrate seed dispersers approximately doubled seedling species richness within canopy gaps and halved species turnover among gaps. Our study demonstrates that dispersal plays a key role in maintaining local and regional patterns of diversity, and highlights the potential for ongoing declines in vertebrate seed dispersers to profoundly alter tropical forest composition.

  12. Ecological transfer of radionuclides and metals to free-living earthworm species in natural habitats rich in NORM.

    Science.gov (United States)

    Mrdakovic Popic, Jelena; Salbu, Brit; Skipperud, Lindis

    2012-01-01

    Transfer of radionuclides ((232)Th and (238)U) and associated metals (As, Cd, Pb and Cr) from soil to free-living earthworm species was investigated in a thorium ((232)Th) rich area in Norway. Sampling took place within former mining sites representing the technologically enhanced naturally occurring radioactive materials (TENORM), at undisturbed site with unique bedrock geology representing the naturally occurring radioactive materials (NORM) and at site outside the (232)Th rich area taken as reference Background site. Soil analysis revealed the elevated levels of investigated elements at NORM and TENORM sites. Based on sequential extraction, uranium ((238)U) and cadmium (Cd) were quite mobile, while the other elements were strongly associated with mineral components of soil. Four investigated earthworm species (Aporrectodea caliginosa, Aporrectodea rosea, Dendrodrilus rubidus and Lumbricus rubellus) showed large individual variability in the accumulation of radionuclides and metals. Differences in uptake by epigeic and endogeic species, as well as differences within same species from the NORM, TENORM and Background sites were also seen. Based on total concentrations in soil, the transfer factors (TF) were in ranges 0.03-0.08 and 0.09-0.25, for (232)Th and (238)U, respectively. TFs for lead (Pb), chromium (Cr) and arsenic (As) were low (less than 0.5), while TFs for Cd were higher (about 10). Using the ERICA tool, the estimated radiation exposure dose rate of the earthworms ranged from 2.2 to 3.9 μGy/h. The radiological risk for investigated earthworms was low (0.28). The obtained results demonstrated that free-living earthworm species can survive in soil containing elevated (232)Th and (238)U, as well As, Cd, Pb and Cr levels, although certain amount of radionuclides was accumulated within their bodies. The present investigation contributes to general better understanding of complex soil-to-biota transfer processes of radionuclides and metals and to assessment

  13. The fragmentation of Pangaea and Mesozoic terrestrial vertebrate biodiversity.

    Science.gov (United States)

    Vavrek, Matthew J

    2016-09-01

    During the Mesozoic (242-66 million years ago), terrestrial regions underwent a massive shift in their size, position and connectivity. At the beginning of the era, the land masses were joined into a single supercontinent called Pangaea. However, by the end of the Mesozoic, terrestrial regions had become highly fragmented, both owing to the drifting apart of the continental plates and the extremely high sea levels that flooded and divided many regions. How terrestrial biodiversity was affected by this fragmentation and large-scale flooding of the Earth's landmasses is uncertain. Based on a model using the species-area relationship (SAR), terrestrial vertebrate biodiversity would be expected to nearly double through the Mesozoic owing to continental fragmentation, despite a decrease of 24% in total terrestrial area. Previous studies of Mesozoic vertebrates have generally found increases in terrestrial diversity towards the end of the era, although these increases are often attributed to intrinsic or climatic factors. Instead, continental fragmentation over this time may largely explain any observed increase in terrestrial biodiversity. This study demonstrates the importance that non-intrinsic effects can have on the taxonomic success of a group, and the importance of geography to understanding past biodiversity. © 2016 The Author(s).

  14. Debris disks as signposts of terrestrial planet formation

    Science.gov (United States)

    Raymond, S. N.; Armitage, P. J.; Moro-Martín, A.; Booth, M.; Wyatt, M. C.; Armstrong, J. C.; Mandell, A. M.; Selsis, F.; West, A. A.

    2011-06-01

    scaling our systems to match the observed semimajor axis distribution of giant exoplanets, we predict that terrestrial exoplanets in the same systems should be a few times more abundant at ~0.5 AU than giant or terrestrial exoplanets at 1 AU; 3) the Solar System appears to be unusual in terms of its combination of a rich terrestrial planet system and a low dust content. This may be explained by the weak, outward-directed instability that is thought to have caused the late heavy bombardment. The movie associated to Fig. 2 is available in electronic form at http://www.aanda.org

  15. Seaweed richness and herbivory increase rate of community recovery from disturbance.

    Science.gov (United States)

    Aquilino, Kristin M; Stachowicz, John J

    2012-04-01

    The importance of herbivores and of plant diversity for community succession and recovery from disturbance is well documented. However, few studies have assessed the relative magnitude of, or potential interactions between, these factors. To determine the combined effect of herbivory and surrounding algal species richness on the recovery of a rocky intertidal community, we conducted a 27-month field experiment assessing algal recruitment and succession in cleared patches that mimic naturally forming gaps in the ambient community. We crossed two herbivore treatments, ambient and reduced abundance, with monocultures and polycultures of the four most common algal species in a mid-high rocky intertidal zone of northern California. We found that both the presence of herbivores and high surrounding algal richness increased recovery rates, and the effect of algal richness was twice the magnitude of that of herbivores. The increased recovery rate of patches containing herbivores was due to the consumption of fast-growing, early colonist species that preempt space from perennial, late-successional species. Mechanisms linking algal richness and recovery are more numerous. In polycultures, herbivore abundance and species composition is altered, desiccation rates are lower, and propagule recruitment, survival, and growth are higher compared to monocultures, all of which could contribute the observed effect of surrounding species richness. Herbivory and species richness should jointly accelerate recovery wherever palatable species inhibit late-successional, herbivore-resistant species and recruitment and survival of new colonists is promoted by local species richness. These appear to be common features of rocky-shore seaweed, and perhaps other, communities.

  16. A comparison of morphological and molecular-based surveys to estimate the species richness of Chaetoceros and Thalassiosira (bacillariophyta, in the Bay of Fundy.

    Directory of Open Access Journals (Sweden)

    Sarah E Hamsher

    Full Text Available The goal of this study was to compare the ability of morphology and molecular-based surveys to estimate species richness for two species-rich diatom genera, Chaetoceros Ehrenb. and Thalassiosira Cleve, in the Bay of Fundy. Phytoplankton tows were collected from two sites at intervals over two years and subsampled for morphology-based surveys (2010, 2011, a culture-based DNA reference library (DRL; 2010, and a molecular-based survey (2011. The DRL and molecular-based survey utilized the 3' end of the RUBISCO large subunit (rbcL-3P to identify genetic species groups (based on 0.1% divergence in rbcL-3P, which were subsequently identified morphologically to allow comparisons to the morphology-based survey. Comparisons were compiled for the year (2011 by site (n = 2 and by season (n = 3. Of the 34 taxa included in the comparisons, 50% of taxa were common to both methods, 35% were unique to the molecular-based survey, and 12% were unique to the morphology-based survey, while the remaining 3% of taxa were unidentified genetic species groups. The morphology-based survey excelled at identifying rare taxa in individual tow subsamples, which were occasionally missed with the molecular approach used here, while the molecular methods (the DRL and molecular-based survey, uncovered nine cryptic species pairs and four previously overlooked species. The last mentioned were typically difficult to identify and were generically assigned to Thalassiosira spp. during the morphology-based survey. Therefore, for now we suggest a combined approach encompassing routine morphology-based surveys accompanied by periodic molecular-based surveys to monitor for cryptic and difficult to identify taxa. As sequencing technologies improve, molecular-based surveys should become routine, leading to a more accurate representation of species composition and richness in monitoring programs.

  17. Biradical character of D-rich carriers in the insoluble organic matter of carbonaceous chondrites: A relic of the protoplanetary disk chemistry

    Science.gov (United States)

    Delpoux, Olivier; Gourier, Didier; Vezin, Hervé; Binet, Laurent; Derenne, Sylvie; Robert, François

    2011-01-01

    The insoluble organic matter (IOM) of the Orgueil meteorite contains deuterium-rich radicals detectable by Electron Paramagnetic Resonance (EPR) techniques ( Gourier et al., 2008). However the structure of these deuterium carriers remains poorly constrained. In this work, their electronic structure is deduced from the measurement of the spin states S by transient nutation in pulsed-EPR. It is shown that these deuterium-rich radicals are dominated by biradicaloids (species with S = 0 ground state and thermally accessible S = 1 state) and biradicals (species with S = 1 ground state) representing ˜61% and ˜31% of the radicals in the IOM of Orgueil, respectively, while single radicals ( S = 1/2) contribute only to ˜8%. This is definitely different from mature terrestrial IOMs, which are known to contain almost exclusively S = 1/2 radicals. A structural model is proposed, whereby the occurrence of dominant biradicaloids and biradicals is the direct consequence of the structure of the IOM, made of a network of small aromatic moieties linked by branched and short aliphatic units. This implies that the formation of stable biradicaloids and biradicals by C-H breaking and their deuterium enrichment are produced after the formation of the IOM in the primitive solar system. These results reinforce the idea that the formation of the IOM and the deuterium-rich hotspots are the product of ion chemistry in the solar disk.

  18. Tectonics, climate, and the rise and demise of continental aquatic species richness hotspots.

    Science.gov (United States)

    Neubauer, Thomas A; Harzhauser, Mathias; Georgopoulou, Elisavet; Kroh, Andreas; Mandic, Oleg

    2015-09-15

    Continental aquatic species richness hotspots are unevenly distributed across the planet. In present-day Europe, only two centers of biodiversity exist (Lake Ohrid on the Balkans and the Caspian Sea). During the Neogene, a wide variety of hotspots developed in a series of long-lived lakes. The mechanisms underlying the presence of richness hotspots in different geological periods have not been properly examined thus far. Based on Miocene to Recent gastropod distributions, we show that the existence and evolution of such hotspots in inland-water systems are tightly linked to the geodynamic history of the European continent. Both past and present hotspots are related to the formation and persistence of long-lived lake systems in geological basins or to isolation of existing inland basins and embayments from the marine realm. The faunal evolution within hotspots highly depends on warm climates and surface area. During the Quaternary icehouse climate and extensive glaciations, limnic biodiversity sustained a severe decline across the continent and most former hotspots disappeared. The Recent gastropod distribution is mainly a geologically young pattern formed after the Last Glacial Maximum (19 ky) and subsequent formation of postglacial lakes. The major hotspots today are related to long-lived lakes in preglacially formed, permanently subsiding geological basins.

  19. Unparalleled rates of species diversification in Europe

    Science.gov (United States)

    Valente, Luis M.; Savolainen, Vincent; Vargas, Pablo

    2010-01-01

    The most rapid species radiations have been reported from ‘evolutionary laboratories’, such as the Andes and the Cape of South Africa, leading to the prevailing view that diversification elsewhere has not been as dramatic. However, few studies have explicitly assessed rates of diversification in northern regions such as Europe. Here, we show that carnations (Dianthus, Caryophyllaceae), a well-known group of plants from temperate Eurasia, have diversified at the most rapid rate ever reported in plants or terrestrial vertebrates. Using phylogenetic methods, we found that the majority of species of carnations belong to a lineage that is remarkably species-rich in Europe, and arose at the rate of 2.2–7.6 species per million years. Unlike most previous studies that have inferred rates of diversification in young diverse groups, we use a conservative approach throughout that explicitly incorporates the uncertainties associated with phylogenetic inference, molecular dating and incomplete taxon sampling. We detected a shift in diversification rates of carnations coinciding with a period of increase in climatic aridity in the Pleistocene, suggesting a link between climate and biodiversity. This explosive radiation suggests that Europe, the continent with the world's best-studied flora, has been underestimated as a cradle of recent and rapid speciation. PMID:20106850

  20. Terrestrial habitat mapping of the Oak Ridge Reservation: 1996 Summary

    International Nuclear Information System (INIS)

    Washington-Allen, R.A.; Ashwood, T.L.

    1996-09-01

    The US DOE is in the process of remediating historical contamination on the Oak Ridge Reservation (ORR). Two key components are ecological risk assessment and monitoring. In 1994 a strategy was developed and a specific program was initiated to implement the strategy for the terrestrial biota of the entire ORR. This document details results of the first task: development of a habitat map and habitat models for key species of interest. During the last 50 years ORR has been a relatively protected island of plant and animal habitats in a region of rapidly expanding urbanization. A preliminary biodiversity assessment of the ORR by the Nature Conservancy in 1995 noted 272 occurrences of significant plant and animal species and communities. Field surveys of threatened and endangered species show that the ORR contains 20 rare plant species, 4 of which are on the state list of endangered species. The rest are either on the state list of threatened species or listed as being of special concern. The ORR provides habitat for some 60 reptilian and amphibian species; more than 120 species of terrestrial birds; 32 species of waterfowl, wading birds, and shorebirds; and about 40 mammalian species. The ORR is both a refuge for rare species and a reservoir of recruitment for surrounding environments and wildlife management areas. Cedar barrens, river bluffs, and wetlands have been identified as the habitat for most rare vascular plant species on the ORR