WorldWideScience

Sample records for template corpse clustering

  1. Alkyltin Keggin Clusters Templated by Sodium.

    Science.gov (United States)

    Saha, Sumit; Park, Deok-Hie; Hutchison, Danielle C; Olsen, Morgan R; Zakharov, Lev N; Marsh, David; Goberna-Ferrón, Sara; Frederick, Ryan T; Diulus, J Trey; Kenane, Nizan; Herman, Gregory S; Johnson, Darren W; Keszler, Douglas A; Nyman, May

    2017-08-14

    Dodecameric (Sn12 ) and hexameric topologies dominate monoalkyltin-oxo cluster chemistry. Their condensation, triggered by radiation exposure, recently produced unprecedented patterning performance in EUV lithography. A new cluster topology was crystallized from industrial n-BuSnOOH, and additional characterization techniques indicate other clusters are present. Single-crystal X-ray analysis reveals a β-Keggin cluster, which is known but less common than other Keggin isomers in polyoxometalate and polyoxocation chemistry. The structure is formulated [NaO4 (BuSn)12 (OH)3 (O)9 (OCH3 )12 (Sn(H2 O)2 )] (β-NaSn13 ). SAXS, NMR, and ESI MS differentiate β-NaSn13 , Sn12 , and other clusters present in crude "n-BuSnOOH" and highlight the role of Na as a template for alkyltin Keggin clusters. Unlike other alkyltin clusters that are cationic, β-NaSn13 is neutral. Consequently, it stands as a unique model system, absent of counterions, to study the transformation of clusters to films and nanopatterns. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  2. Visual cluster analysis and pattern recognition template and methods

    Science.gov (United States)

    Osbourn, Gordon Cecil; Martinez, Rubel Francisco

    1999-01-01

    A method of clustering using a novel template to define a region of influence. Using neighboring approximation methods, computation times can be significantly reduced. The template and method are applicable and improve pattern recognition techniques.

  3. Two new polyoxovanadate clusters templated through cysteamine

    Indian Academy of Sciences (India)

    Unknown

    Next two steps correspond to the loss of organic and further weight loss corresponds to the degradation of decavanadate cluster. In 2, the first step corresponds to the weight loss of six water molecules followed by next three steps showing the loss of four water molecules and organic respectively. Further steps correspond to ...

  4. Script identification from images using cluster-based templates

    Science.gov (United States)

    Hochberg, J.G.; Kelly, P.M.; Thomas, T.R.

    1998-12-01

    A computer-implemented method identifies a script used to create a document. A set of training documents for each script to be identified is scanned into the computer to store a series of exemplary images representing each script. Pixels forming the exemplary images are electronically processed to define a set of textual symbols corresponding to the exemplary images. Each textual symbol is assigned to a cluster of textual symbols that most closely represents the textual symbol. The cluster of textual symbols is processed to form a representative electronic template for each cluster. A document having a script to be identified is scanned into the computer to form one or more document images representing the script to be identified. Pixels forming the document images are electronically processed to define a set of document textual symbols corresponding to the document images. The set of document textual symbols is compared to the electronic templates to identify the script. 17 figs.

  5. Anion-Templated Nanosized Silver Alkynyl Clusters: Cluster Engineering and Solution Behavior.

    Science.gov (United States)

    Zhang, Shan-Shan; Su, Hai-Feng; Wang, Zhi; Wang, Lina; Zhao, Quan-Qin; Tung, Chen-Ho; Sun, Di; Zheng, Lan-Sun

    2017-03-08

    Assembly of nanosized polynuclear metal clusters from simple building blocks usually involves complicated self-organization processes and thus is a long-standing challenge. Here, we demonstrate the controllable assembly, single-crystal structures and solution behaviors of four molecular assemblies based on nanosized silver alkynyl clusters, formulated as {[(CrO4 )2 Cl@Ag42 (PhC≡C)34 (CF3 COO)2 ]⋅CF3 COO} (1), {(NH4 )[(CrO4 )2 Cl@Ag42 (PhC≡C)34 (CrO4 )(H2 O)2 ]⋅2BF4 ⋅CH3 OH}n (2), [(CrO4 )@Ag22 (PhC≡C)16 (CF3 SO3 )4 ]n (3), and {[(CrO4 )2 @Ag31 (PhC≡C)22 (CF3 SO3 )4 ]⋅CF3 SO3 ⋅2CH3 OH⋅H2 O}n (4). In the presence of concomitant CrO42- and Cl- templates, we could isolate a discrete cluster 1 and a polymeric chain-like compound 2 by using different silver salts. Both 1 and 2 have a similar 42-metallic cage, which traps two CrO42- and one Cl- as anion templates. Using sole CrO42- template, 3 and 4 were simultaneously isolated in a one-pot reaction. Both of them are 1D chain structures based on single CrO42- templated Ag18 and double CrO42- templated Ag30 clusters, respectively. HR-ESI-MS was used to study the solution behaviors of 1-4. This work has the following purposes: i) it presents the cluster engineering concept used in the assembly of polynuclear silver alkynyl clusters; ii) it exemplifies template effects from hetero and homo anions; and iii) it provides a controllable way to achieve assembly of silver alkynyl clusters. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  6. Base motif recognition and design of DNA templates for fluorescent silver clusters by machine learning.

    Science.gov (United States)

    Copp, Stacy M; Bogdanov, Petko; Debord, Mark; Singh, Ambuj; Gwinn, Elisabeth

    2014-09-03

    Discriminative base motifs within DNA templates for fluorescent silver clusters are identified using methods that combine large experimental data sets with machine learning tools for pattern recognition. Combining the discovery of certain multibase motifs important for determining fluorescence brightness with a generative algorithm, the probability of selecting DNA templates that stabilize fluorescent silver clusters is increased by a factor of >3. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  7. Interaction of Graphene and Templated Cluster Arrays with CO, H2, and O2

    OpenAIRE

    Gerber, Timm

    2013-01-01

    Interaction of graphene and templated cluster arrays with CO, H2 and O2 was studied by means of scanning tunneling microscopy (STM) and X-ray photoemission spectroscopy (XPS). The experimental data was complemented by ab initio density functional theory (DFT) calculations. As a prerequisite for studies of gas interaction, the binding mechanism of the clusters to graphene, as well as the growth and structure of Pt clusters, was investigated in detail. The formation of cluster lattices on g...

  8. Andreas Vesalius' corpses.

    Science.gov (United States)

    Biesbrouck, Maurits; Steeno, Omer

    2014-01-01

    Judging from his writings, Andreas Vesalius must have had dozens of bodies at his disposal, thirteen of which were definitely from before 1543. They came from cemeteries, places of execution or hospitals. Not only did his students help him obtain the bodies, but also public and judicial authorities. At first, he used the corpses for his own learning purposes, and later to teach his students and to write De humani corporis fabrica, his principal work. Clearly he had an eye for comparative anatomy. He observed anatomical variants and studied foetal anatomy. Occasionally, he would dissect a body to study physiological processes, while the post-mortems on the bodies brought in by the families of the deceased gave him an insight into human pathology. Some of his dissection reports have been preserved.

  9. Power-Law Template for IR Point Source Clustering

    Science.gov (United States)

    Addison, Graeme E.; Dunkley, Joanna; Hajian, Amir; Viero, Marco; Bond, J. Richard; Das, Sudeep; Devlin, Mark; Halpern, Mark; Hincks, Adam; Hlozek, Renee; hide

    2011-01-01

    We perform a combined fit to angular power spectra of unresolved infrared (IR) point sources from the Planck satellite (at 217,353,545 and 857 GHz, over angular scales 100 clustered power over the range of angular scales and frequencies considered is well fit by a simple power law of the form C_l\\propto I(sup -n) with n = 1.25 +/- 0.06. While the IR sources are understood to lie at a range of redshifts, with a variety of dust properties, we find that the frequency dependence of the clustering power can be described by the square of a modified blackbody, nu(sup beta) B(nu,T_eff), with a single emissivity index beta = 2.20 +/- 0.07 and effective temperature T_eff= 9.7 K. Our predictions for the clustering amplitude are consistent with existing ACT and South Pole Telescope results at around 150 and 220 GHz, as is our prediction for the effective dust spectral index, which we find to be alpha_150-220 = 3.68 +/- 0.07 between 150 and 220 GHz. Our constraints on the clustering shape and frequency dependence can be used to model the IR clustering as a contaminant in Cosmic Microwave Background anisotropy measurements. The combined Planck and BLAST data also rule out a linear bias clustering model.

  10. Power-Law Template for Infrared Point-Source Clustering

    Science.gov (United States)

    Addison, Graeme E; Dunkley, Joanna; Hajian, Amir; Viero, Marco; Bond, J. Richard; Das, Sudeep; Devlin, Mark J.; Halpern, Mark; Hincks, Adam D; Hlozek, Renee; hide

    2012-01-01

    We perform a combined fit to angular power spectra of unresolved infrared (IR) point sources from the Planck satellite (at 217, 353, 545, and 857 GHz, over angular scales 100 approx clustered power over the range of angular scales and frequencies considered is well fitted by a simple power law of the form C(sup clust)(sub l) varies as l (sub -n) with n = 1.25 +/- 0.06. While the IR sources are understood to lie at a range of redshifts, with a variety of dust properties, we find that the frequency dependence of the clustering power can be described by the square of a modified blackbody, ?(sup Beta)B(?, T(sub eff) ), with a single emissivity index Beta = 2.20 +/- 0.07 and effective temperature T(sub eff) = 9.7 K. Our predictions for the clustering amplitude are consistent with existing ACT and South Pole Telescope results at around 150 and 220 GHz, as is our prediction for the effective dust spectral index, which we find to be alpha(sub 150-220) = 3.68 +/- 0.07 between 150 and 220 GHz. Our constraints on the clustering shape and frequency dependence can be used to model the IR clustering as a contaminant in cosmic microwave background anisotropy measurements. The combined Planck and BLAST data also rule out a linear bias clustering model.

  11. Silver Thiolate Nano-sized Molecular Clusters and Their Supramolecular Covalent Frameworks: An Approach Toward Pre-templated Synthesis.

    Science.gov (United States)

    Chen, Zi-Yi; Tam, Dennis Y S; Zhang, Leon Li-Min; Mak, Thomas C W

    2017-10-18

    A series of seven new complexes including silver-thiolate molecular clusters and their covalent supramolecular frameworks have been assembled from the silver carbide precursor Ag2 C2 using a C2(2-) pre-templated approach. Herein, two prototype clusters Ag14 (SR)6 and CO3 @Agm (SR)10 (R=isopropyl, cyclohexyl or tert-butyl; m=18 or 20) are employed to construct cluster-based metal-organic frameworks of different dimensions. In particular, both new ellipsoidal tetradecanuclear molecular cluster compounds, namely, Ag14 (S-iPr)6 (CO2 CF3 )8 ⋅(DMSO)6 (two polymorphic forms 1, 2) and [Ag14 (S-Cy)6 (CO2 CF3 )8 (DMSO)4 ]⋅(DMSO)3 (3), and a cluster-based metal-organic framework {Ag3 [Ag14 (S-iPr)6 (CO2 CF3 )11 (H2 O)3 CH3 OH]⋅(H2 O)2.5 }n (4) have been isolated and structurally characterized. Furthermore, increased acidity of the reaction mixture afforded three carboxylate-templated cluster based frameworks: a chain-like compound {[HN(CH3 )2 CO]⋅[CO3 @Ag18 (S-tBu)10 (NO3 )7 (DMF)4 ]⋅DMF}n (5), as well as two layer-type compounds, namely, {Ag[CO3 @Ag20 (S-iPr)10 (CO2 CF3 )9 (CO2 HCF3 )(CH3 OH)2 ]}n (6) and {Ag2 [CO3 @Ag20 (S-Cy)10 (CO2 CF3 )10 (CO2 HCF3 )2 (H2 O)2 ]⋅(H2 O)3 ⋅(CH3 OH)3 }n (7) exhibiting sql-net characteristics. It is demonstrated that the C≡C(2-) pre-template, which draws several Ag(+) ions together to form the C2 @Agn entity, plays an indispensable role in the syntheses of these compounds. Furthermore, covalent linkage of these nano-sized silver thiolate clusters from one- to three-dimensions revealed enormous potential for the future development of silver cluster-based frameworks. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  12. Tool use for corpse cleaning in chimpanzees

    Science.gov (United States)

    van Leeuwen, Edwin J. C.; Cronin, Katherine A.; Haun, Daniel B. M.

    2017-03-01

    For the first time, chimpanzees have been observed using tools to clean the corpse of a deceased group member. A female chimpanzee sat down at the dead body of a young male, selected a firm stem of grass, and started to intently remove debris from his teeth. This report contributes novel behaviour to the chimpanzee’s ethogram, and highlights how crucial information for reconstructing the evolutionary origins of human mortuary practices may be missed by refraining from developing adequate observation techniques to capture non-human animals’ death responses.

  13. Evidence of cue synergism in termite corpse response behavior

    Science.gov (United States)

    Ulyshen, Michael D.; Shelton, Thomas G.

    2012-02-01

    Subterranean termites of the genus Reticulitermes are known to build walls and tubes and move considerable amounts of soil into wood but the causes of this behavior remain largely unexplored. In laboratory assays, we tested the hypothesis that Reticulitermes virginicus (Banks) would carry more sand into wooden blocks containing corpses compared to corpse-free controls. We further predicted that the corpses of predatory ants would elicit a stronger response than those of a benign beetle species or nestmates. As hypothesized, significantly more sand was carried into blocks containing corpses and this material was typically used to build partitions separating the dead from the rest of the colony. Contrary to expectations, however, this behavior did not vary among corpse types. We then tested the hypothesis that oleic acid, an unsaturated fatty acid released during arthropod decay and used by ants and other arthropod taxa in corpse recognition, would induce a similar building response in R. virginicus. To additionally determine the role of foreign objects in giving rise to this behavior, the experiment was carried out with and without imitation corpses (i.e., small glass beads). As predicted, oleic acid induced building (a tenfold increase) but only when applied to beads, suggesting strong synergism between tactile and chemical cues. Oleic acid also significantly reduced the amount of wood consumed by R. virginicus and may possess useful repellent properties.

  14. From Anticipatory Corpse to Posthuman God.

    Science.gov (United States)

    Bishop, Jeffrey P

    2016-12-01

    The essays in this issue of JMP are devoted to critical engagement of my book, The Anticipatory Corpse The essays, for the most part, accept the main thrust of my critique of medicine. The main thrust of the criticism is whether the scope of the critique is too totalizing, and whether the proposed remedy is sufficient. I greatly appreciate these interventions because they allow me this occasion to respond and clarify, and to even further extend the argument of my book. In this response essay, I maintain that the regnant social imaginary of medicine is the regnant social imaginary of our time. It is grounded in a specific ontotheology: where ontology is a power ontology; where material is malleable to the open-ended organization of power and dependent only on working out the efficient mechanisms of its enactment; where ethically it is oriented only to the immanent telos of utility maximization in the short run, and ultimately to some posthuman future in the long run. This ontotheology originates in the anticipatory corpse and is ordered toward some god-like posthuman being. The entire ontotheology finds enactment through the political economy of neoliberalism. This social imaginary constantly works to insulate itself from other social imaginaries through the use of its institutional power, through marginalization, circumscription, or absorption. The modern social imaginary of neoliberal societies marginalizes and politically isolates other social imaginaries, or transforms them into something acceptable to the neoliberal imaginary. Yet, these other social imaginaries could influence the larger social imaginary in novel ways, sometimes through withdrawal and sometimes through challenges. These other practices-again, usually practices ordered according to different ontological and teleological purposes-might serve as a source of renewal and transformation, but only if the practitioners of these other social imaginaries understand the ontotheological powers that they

  15. An Iconography of the Flesh: How Corpses Mean As Matter

    Directory of Open Access Journals (Sweden)

    Margaret Shwartz

    2013-09-01

    Full Text Available The structuring relationship between the material world and the world of culture is variously embodied in the figure of the corpse. To ask how corpses mean as matter is to attend to them as “things themselves”—by bracketing the freighted assumptions and naturally mixed feelings we have when we encounter something that cannot but remind us of our own mortality. Corpses force us to think of putrefaction—and allow us, via a complex system of cultural and representational practices, to just as quickly disavow this unpleasantness. Wherever the corpse appears, then, it brings with it ideas about the relationship between representation and the real, or, more precisely, about the matter of subjectivity. This materiality also crucially constitutes the corpse’s difference from the identity of the deceased, and it is here where the corpse may thus do more than simply reference the past. The end point of the argument, then, is to work towards a vocabulary that allows this difference—this material remainder—to figure meaningfully in practices of grief and mourning that may not point exclusively back towards the deceased (and inevitably a particular version of that person’s legacy but towards the future and towards polysemic, even conflicting ideas of the responsibility placed upon us by this death. This paper opens a discussion of corpses as “vibrant matter” (to borrow Jane Bennett’s provocative term whose materiality is an equal partner to their cultural significance. My reading opens a conversation about the very real work of corpses as things capable of organizing diverse affect that in turn may become considered action. Following Bennett’s reading of Deleuze and Latour, I account for the corpse as both deceased subject and material object by framing it as a kind of assemblage. As remains, the corpse is essentially referential, the remains of someone. But remains are also material, matter that functions as an actant in concert with

  16. The Dynami(n)cs of cell corpse engulfment.

    Science.gov (United States)

    Shaham, Shai

    2006-06-01

    Engulfment of dying cells plays an important role during animal development and homeostasis, and several proteins involved in this process are known. However, the cell biology underlying phagocyte arm extension and cell corpse degradation is not well understood. A study published in this issue of Developmental Cell (Yu et al., 2006) now demonstrates an important role for the GTPase dynamin in these events.

  17. Microbial community assembly and metabolic function during mammalian corpse decomposition

    Energy Technology Data Exchange (ETDEWEB)

    Metcalf, J. L.; Xu, Z. Z.; Weiss, S.; Lax, S.; Van Treuren, W.; Hyde, E. R.; Song, S. J.; Amir, A.; Larsen, P.; Sangwan, N.; Haarmann, D.; Humphrey, G. C.; Ackermann, G.; Thompson, L. R.; Lauber, C.; Bibat, A.; Nicholas, C.; Gebert, M. J.; Petrosino, J. F.; Reed, S. C.; Gilbert, J. A.; Lynne, A. M.; Bucheli, S. R.; Carter, D. O.; Knight, R.

    2015-12-10

    Vertebrate corpse decomposition provides an important stage in nutrient cycling in most terrestrial habitats, yet microbially mediated processes are poorly understood. Here we combine deep microbial community characterization, community-level metabolic reconstruction, and soil biogeochemical assessment to understand the principles governing microbial community assembly during decomposition of mouse and human corpses on different soil substrates. We find a suite of bacterial and fungal groups that contribute to nitrogen cycling and a reproducible network of decomposers that emerge on predictable time scales. Our results show that this decomposer community is derived primarily from bulk soil, but key decomposers are ubiquitous in low abundance. Soil type was not a dominant factor driving community development, and the process of decomposition is sufficiently reproducible to offer new opportunities for forensic investigations.

  18. Microbial community assembly and metabolic function during mammalian corpse decomposition

    Science.gov (United States)

    Metcalf, Jessica L; Xu, Zhenjiang Zech; Weiss, Sophie; Lax, Simon; Van Treuren, Will; Hyde, Embriette R.; Song, Se Jin; Amir, Amnon; Larsen, Peter; Sangwan, Naseer; Haarmann, Daniel; Humphrey, Greg C; Ackermann, Gail; Thompson, Luke R; Lauber, Christian; Bibat, Alexander; Nicholas, Catherine; Gebert, Matthew J; Petrosino, Joseph F; Reed, Sasha C.; Gilbert, Jack A; Lynne, Aaron M; Bucheli, Sibyl R; Carter, David O; Knight, Rob

    2016-01-01

    Vertebrate corpse decomposition provides an important stage in nutrient cycling in most terrestrial habitats, yet microbially mediated processes are poorly understood. Here we combine deep microbial community characterization, community-level metabolic reconstruction, and soil biogeochemical assessment to understand the principles governing microbial community assembly during decomposition of mouse and human corpses on different soil substrates. We find a suite of bacterial and fungal groups that contribute to nitrogen cycling and a reproducible network of decomposers that emerge on predictable time scales. Our results show that this decomposer community is derived primarily from bulk soil, but key decomposers are ubiquitous in low abundance. Soil type was not a dominant factor driving community development, and the process of decomposition is sufficiently reproducible to offer new opportunities for forensic investigations.

  19. Natural Disasters, Corpses and the Risk of Infectious Diseases

    Directory of Open Access Journals (Sweden)

    JM Conly

    2005-01-01

    Full Text Available The recent occurrence of the category 4 Hurricane Katrina devastated the United States? Gulf Coast. The hurricane caused widespread destruction and flooding, and left hundreds of thousands of people homeless. The mounting death toll was reported at almost 300 deaths as of September 8, 2005 (1,2. The unfolding events and high death toll have left an unusual situation in which there are many decomposing corpses either lying on the streets or floating in the flood waters. The presence of these corpses in open settings, such as in public places and in the water that has inundated much of the city of New Orleans, naturally raises concerns about the occurrence of infectious disease epidemics (3. In the aftermath of large natural disasters, instinctive uncertainties arise among workers and the general population with respect to the appropriate handling and disposal of dead bodies and human remains. Given the recent occurrence of Hurricane Katrina as a large natural disaster and the unprecedented setting of the numerous corpses requiring disposal, it was considered timely to review the infectious disease risks associated with the handling of dead bodies.

  20. Nipah virus infection outbreak with nosocomial and corpse-to-human transmission, Bangladesh.

    Science.gov (United States)

    Sazzad, Hossain M S; Hossain, M Jahangir; Gurley, Emily S; Ameen, Kazi M H; Parveen, Shahana; Islam, M Saiful; Faruque, Labib I; Podder, Goutam; Banu, Sultana S; Lo, Michael K; Rollin, Pierre E; Rota, Paul A; Daszak, Peter; Rahman, Mahmudur; Luby, Stephen P

    2013-02-01

    Active Nipah virus encephalitis surveillance identified an encephalitis cluster and sporadic cases in Faridpur, Bangladesh, in January 2010. We identified 16 case-patients; 14 of these patients died. For 1 case-patient, the only known exposure was hugging a deceased patient with a probable case, while another case-patient's exposure involved preparing the same corpse for burial by removing oral secretions and anogenital excreta with a cloth and bare hands. Among 7 persons with confirmed sporadic cases, 6 died, including a physician who had physically examined encephalitis patients without gloves or a mask. Nipah virus-infected patients were more likely than community-based controls to report drinking raw date palm sap and to have had physical contact with an encephalitis patient (29% vs. 4%, matched odds ratio undefined). Efforts to prevent transmission should focus on reducing caregivers' exposure to infected patients' bodily secretions during care and traditional burial practices.

  1. A facile synthesis of luminescent YVO4:Eu3+ hollow microspheres in virtue of template function of the SDS-PEG soft clusters

    Science.gov (United States)

    Wang, Juan; Yan, Yinglin; Hojamberdiev, Mirabbos; Ruan, Xiaoguang; Cai, Anjiang; Xu, Yunhua

    2012-08-01

    Hollow europium-doped yttrium orthovanadate (YVO4:Eu3+) microspheres were fabricated via a sodium dodecyl sulfate (SDS)-polyethylene glycol (PEG)-assisted hydrothermal technique. The as-synthesized hollow YVO4:Eu3+ microspheres were characterized by X-ray powder diffraction (XRD), scanning electron microscopy (SEM) and photoluminescence spectroscopy (PL). The obtained results showed that the morphology and size of the hollow microspheres have a strong dependence on the hydrothermal reaction time of the YVO4:Eu3+ powders. It is believed that the SDS-PEG clusters perform a function of dual soft-template that results in a unique template-induced secondary assembly in the one-pot synthesis of hollow YVO4:Eu3+ microspheres. The photoluminescence measurement revealed that the YVO4:Eu3+ powders with a spherical hollow shape have better red luminescence compared to the YVO4:Eu3+ solid microspheres. As a result, the controlled synthesis of hollow YVO4:Eu3+ microspheres not only has a great theoretical significance in studying the three-dimensional control and selective synthesis of inorganic materials but also benefits the potential applications based on hollow YVO4:Eu3+ microspheres owing to reducing the usage of expensive rare-earth elements.

  2. Differential undertaking response of a lower termite to congeneric and conspecific corpses.

    Science.gov (United States)

    Sun, Qian; Haynes, Kenneth F; Zhou, Xuguo

    2013-01-01

    Undertaking behaviour is an essential activity in social insects. Corpses are often recognized by a postmortem change in a chemical signature. Reticulitermes flavipes responded to corpses within minutes of death. This undertaking behaviour did not change with longer postmortem time (24 h); however, R. flavipes exhibited distinctively different behaviours toward dead termites from various origins. Corpses of the congeneric species, Reticulitermes virginicus, were buried onsite by workers with a large group of soldiers guarding the burial site due to the risk of interspecific competition; while dead conspecifics, regardless of colony origin, were pulled back into the holding chamber for nutrient recycling and hygienic purposes. The burial task associated with congeneric corpses was coupled with colony defence and involved ten times more termites than retrieval of conspecific corpses. Our findings suggest elicitation of undertaking behaviour depends on the origin of corpses which is associated with different types of risk.

  3. Differential undertaking response of a lower termite to congeneric and conspecific corpses

    OpenAIRE

    Qian Sun; Haynes, Kenneth F.; Xuguo Zhou

    2013-01-01

    Undertaking behaviour is an essential activity in social insects. Corpses are often recognized by a postmortem change in a chemical signature. Reticulitermes flavipes responded to corpses within minutes of death. This undertaking behaviour did not change with longer postmortem time (24?h); however, R. flavipes exhibited distinctively different behaviours toward dead termites from various origins. Corpses of the congeneric species, Reticulitermes virginicus, were buried onsite by workers with ...

  4. Report Template

    DEFF Research Database (Denmark)

    Bjørn, Anders; Laurent, Alexis; Owsianiak, Mikołaj

    2017-01-01

    To ensure consistent reporting of life cycle assessment (LCA), we provide a report template. The report includes elements of an LCA study as recommended but the ILCD Handbook. Illustrative case study reported according to this template is presented in Chap. 39 ....

  5. ccz-1 mediates the digestion of apoptotic corpses in C. elegans.

    Science.gov (United States)

    Nieto, Cristina; Almendinger, Johann; Gysi, Stephan; Gómez-Orte, Eva; Kaech, Andres; Hengartner, Michael O; Schnabel, Ralf; Moreno, Sergio; Cabello, Juan

    2010-06-15

    During development, the processes of cell division, differentiation and apoptosis must be precisely coordinated in order to maintain tissue homeostasis. The nematode C. elegans is a powerful model system in which to study cell death and its control. C. elegans apoptotic cells condense and form refractile corpses under differential interference contrast (DIC) microscopy. Activation of the GTPase CED-10 (Rac) in a neighbouring cell mediates the recognition and engulfment of the cell corpse. After inclusion of the engulfed corpse in a phagosome, different proteins are sequentially recruited onto this organelle to promote its acidification and fusion with lysosomes, leading to the enzymatic degradation of the cell corpse. We show that CCZ-1, a protein conserved from yeasts to humans, mediates the digestion of these apoptotic corpses. CCZ-1 seems to act in lysosome biogenesis and phagosome maturation by recruiting the GTPase RAB-7 over the phagosome.

  6. Curious afterlives: the enduring appeal of the criminal corpse

    Science.gov (United States)

    Tarlow, Sarah

    2016-01-01

    Abstract Not only did the criminal corpse have actual medicinal and magical power for Europeans, it also had social and cultural meaning as an object, a curio or secular relic. This paper considers the appeal of notorious bodies. From books bound in the skin of a criminal, to preserved and exhibited heads, from fragments of the hangman’s rope to the exhibition of the skeleton, the story of the afterlife of criminal bodies and the material culture most immediately associated with them begins with the collection and exchange of bodies and moves into contemporary preoccupations with authenticity. This paper considers the bodies of three notorious criminals of the eighteenth century: Eugene Aram, William Burke and William Corder. It ends with some reflections on the glamour of the authentic body of a notorious or celebrated individual – using the response to the discovery of the body of Richard III as an example. PMID:27366110

  7. Curious afterlives: the enduring appeal of the criminal corpse.

    Science.gov (United States)

    Tarlow, Sarah

    2016-07-02

    Not only did the criminal corpse have actual medicinal and magical power for Europeans, it also had social and cultural meaning as an object, a curio or secular relic. This paper considers the appeal of notorious bodies. From books bound in the skin of a criminal, to preserved and exhibited heads, from fragments of the hangman's rope to the exhibition of the skeleton, the story of the afterlife of criminal bodies and the material culture most immediately associated with them begins with the collection and exchange of bodies and moves into contemporary preoccupations with authenticity. This paper considers the bodies of three notorious criminals of the eighteenth century: Eugene Aram, William Burke and William Corder. It ends with some reflections on the glamour of the authentic body of a notorious or celebrated individual - using the response to the discovery of the body of Richard III as an example.

  8. Anatomical model for dissection in corpses of the palate vascularization

    Directory of Open Access Journals (Sweden)

    Pinheiro Neto, Carlos Diógenes

    2010-03-01

    Full Text Available Introduction: The main artery that supplies the mucoperiosteum of the hard palate is the greater palatine artery. The knowledge detailed of the vascular anatomy of the palate and, in special, of the region of the greater palatine foramen is important for prevention of lesions vascular during procedures in this region. Among these procedures, it included the making of shreds for correction of failures in the hard palate, soft palate and cranial base. Objective: To develop an anatomical model that can illustrate the endoscopic anatomy of the greater palatine foramen and analyze the technical of injection intra vascular of colored silicone is sufficient for fill the lower arterial branches than irrigate the hard palate. Method: The form of study was experimental through the endoscopic dissection of 10 greater palatine arteries in five heads of corpses prepared with injection intra vascular of colored silicone. Results: Of the total of 10 arteries dissected, 8 properly were colored by the technique of injection employed. What corresponds to an efficacy of 80%. Conclusion: The anatomical model showed to be a feasible approach for the endoscopic study of the greater palatine foramen, being the injection of efficient silicone in the terminals vessels coloring in 80% of the cases.

  9. [Decomposition of corpses--a microbial degradation process with special reference to mummification, formation of adipocere and incomplete putrified corpes].

    Science.gov (United States)

    Schoenen, Dirk

    2013-01-01

    Decomposition of the human body is a microbial process. It is influenced by the environmental situation and it depends to a high degree on the exchange of substances between the corpse and the environment. Mummification occurs at low humidity or frost. Adipocere arises from lack of oxygen, incomplete putrified corpses develop when there is no exchange of air or water between the corpse and the environment.

  10. A report on the pupae of Desmometopa sp. (Diptera: Milichiidae) recovered from a human corpse in Malaysia.

    Science.gov (United States)

    Kumara, T K; Abu Hassan, A; Che Salmah, M R; Bhupinder, S

    2010-04-01

    The pupae of Desmometopa sp. (Diptera: Milichiidae) were collected from a human corpse found indoor in active decay stage together with the larvae of Sarcophagidae, Synthesiomyia nudiseta (Wulp), Chrysomya megacephala (Fabricius) and Chrysomya rufifacies (Macquart). This research note is the first report of the Desmometopa sp. recovered from a human corpse in Malaysia.

  11. Perl Template Toolkit

    CERN Document Server

    Chamberlain, Darren; Cross, David; Torkington, Nathan; Diaz, tatiana Apandi

    2004-01-01

    Among the many different approaches to "templating" with Perl--such as Embperl, Mason, HTML::Template, and hundreds of other lesser known systems--the Template Toolkit is widely recognized as one of the most versatile. Like other templating systems, the Template Toolkit allows programmers to embed Perl code and custom macros into HTML documents in order to create customized documents on the fly. But unlike the others, the Template Toolkit is as facile at producing HTML as it is at producing XML, PDF, or any other output format. And because it has its own simple templating language, templates

  12. Code Generation with Templates

    CERN Document Server

    Arnoldus, Jeroen; Serebrenik, A

    2012-01-01

    Templates are used to generate all kinds of text, including computer code. The last decade, the use of templates gained a lot of popularity due to the increase of dynamic web applications. Templates are a tool for programmers, and implementations of template engines are most times based on practical experience rather than based on a theoretical background. This book reveals the mathematical background of templates and shows interesting findings for improving the practical use of templates. First, a framework to determine the necessary computational power for the template metalanguage is presen

  13. cluster

    Indian Academy of Sciences (India)

    electron transfer chains involved in a number of biologi- cal systems including respiration and photosynthesis.1. The most common iron–sulphur clusters found as active centres in iron–sulphur proteins are [Fe2S2], [Fe3S4] and [Fe4S4], in which Fe(III) ions are coordinated to cysteines from the peptide and are linked to each ...

  14. The effects of implementing a point-of-care electronic template to prompt routine anxiety and depression screening in patients consulting for osteoarthritis (the Primary Care Osteoarthritis Trial: A cluster randomised trial in primary care.

    Directory of Open Access Journals (Sweden)

    Christian D Mallen

    2017-04-01

    Full Text Available This study aimed to evaluate whether prompting general practitioners (GPs to routinely assess and manage anxiety and depression in patients consulting with osteoarthritis (OA improves pain outcomes.We conducted a cluster randomised controlled trial involving 45 English general practices. In intervention practices, patients aged ≥45 y consulting with OA received point-of-care anxiety and depression screening by the GP, prompted by an automated electronic template comprising five questions (a two-item Patient Health Questionnaire-2 for depression, a two-item Generalized Anxiety Disorder-2 questionnaire for anxiety, and a question about current pain intensity [0-10 numerical rating scale]. The template signposted GPs to follow National Institute for Health and Care Excellence clinical guidelines for anxiety, depression, and OA and was supported by a brief training package. The template in control practices prompted GPs to ask the pain intensity question only. The primary outcome was patient-reported current pain intensity post-consultation and at 3-, 6-, and 12-mo follow-up. Secondary outcomes included pain-related disability, anxiety, depression, and general health. During the trial period, 7,279 patients aged ≥45 y consulted with a relevant OA-related code, and 4,240 patients were deemed potentially eligible by participating GPs. Templates were completed for 2,042 patients (1,339 [31.6%] in the control arm and 703 [23.1%] in the intervention arm. Of these 2,042 patients, 1,412 returned questionnaires (501 [71.3%] from 20 intervention practices, 911 [68.0%] from 24 control practices. Follow-up rates were similar in both arms, totalling 1,093 (77.4% at 3 mo, 1,064 (75.4% at 6 mo, and 1,017 (72.0% at 12 mo. For the primary endpoint, multilevel modelling yielded significantly higher average pain intensity across follow-up to 12 mo in the intervention group than the control group (adjusted mean difference 0.31; 95% CI 0.04, 0.59. Secondary

  15. First Report of Necrophagous Insects on Human Corpses in Riyadh, Saudi Arabia.

    Science.gov (United States)

    Alajmi, R A; AlGhufaili, H; Farrukh, A; Aljohani, H; Mashaly, A M A

    2016-11-01

    Necrophagous species of insects provide useful complementary data to estimate the postmortem interval in forensic cases. Here, for the first time, we report on insect specimens collected from human corpses in Riyadh, Kingdom of Saudi Arabia. During the study, 14 beetle larvae were collected from the outdoor corpse (case report one) and five flies and seven beetles were collected from the indoor corpse (case report two). Sequencing was performed to study the mitochondrial DNA (mtDNA) as the prospective basis of an identification technique. The sequencing focused on a section of the cytochrome oxidase I encoding region of mtDNA. Two beetle species, Dermestes frischii (Kugelann) and Dermestes maculatus (De Geer) (Coleoptera: Dermestidae), and one fly species, Chrysomya albiceps (Wiedemann) (Diptera: Calliphoridae), were identified. These results will be instrumental in the implementation of a Saudi database of forensically relevant insects. © The Authors 2016. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  16. Metal nitride cluster as a template to tune the electronic and magnetic properties of rare-earth metal containing endohedral fullerenes

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, Yang

    2013-10-16

    Rare-earth metal containing endohedral fullerenes have attracted much attention due to the feasibility of encaging metal atom, atoms or cluster inside of carbon cages. By switching the metal atom or cluster entrapped inside of the carbon cage the physical and chemical properties of the fullerene compounds can be tuned. The understanding of magnetic and electrochemical properties of endohedral fullerenes plays an essential role in fundamental scientific researches and potential applications in materials science. In this thesis, synthesizing novel rare-earth metal containing endohedral fullerene structures, studying the properties of these isolated endohedral fullerenes and the strategies of tuning the electronic and magnetic properties of endohedral fullerenes were introduced. The DC-arc discharging synthesis of different lanthanide metal-based (Ho, Ce and Pr) mixed metal nitride clusterfullerenes was achieved. Those rare-earth metal containing endohedral fullerenes were isolated by multi-step HPLC. The isolated samples were characterized by spectroscopic techniques included UV-vis-NIR, FTIR, Raman, LDI-TOF mass spectrometry, NMR and electrochemistry. The Ho-based mixed metal nitride clusterfullerenes Ho{sub x}M{sub 3-x}N rate at C{sub 80} (M= Sc, Lu, Y; x=1, 2) were synthesized by ''reactive gas atmosphere'' method or ''selective organic solid'' route. The isolated samples were characterized by LDI-TOF mass spectrometry, UV-vis-NIR, FTIR, Raman and NMR spectroscopy. The {sup 13}C NMR spectroscopic studies demonstrated exceptional NMR behaviors that resulted from switching the second metal inside of the mixed metal nitride cluster Ho{sub x}M{sub 3-x}N from Sc to Lu and further to Y. The LnSc{sub 2}N rate at C{sub 80} (Ln= Ce, Pr, Nd, Tb, Dy, Ho, Lu) MMNCFs were characterized by {sup 13}C and {sup 45}Sc NMR study respectively. According to Bleaney's theory and Reilley method, the separation of δ{sup PC} and δ{sup con

  17. First record of Hermetia illucens (Diptera: Stratiomyidae) on human corpses in Iberian Peninsula.

    Science.gov (United States)

    Martínez-Sánchez, Anabel; Magaña, Concepción; Saloña, Marta; Rojo, Santos

    2011-03-20

    This article presents the first record of Hermetia illucens larvae on a human corpse in Spain (the second case report in Europe). Prepupae of H. illucens, and other insects, were recovered from the dead body of a 72-year-old man in an advanced stage of decomposition. The body was located in Reus (NE Spain), in October 1998. This article provides additional biological data on experimental studies and an update on the geographic distribution of this species in the Iberian Peninsula. Copyright © 2010 Elsevier Ireland Ltd. All rights reserved.

  18. DTM: Deformable Template Matching

    OpenAIRE

    Lee, Hyungtae; Kwon, Heesung; Robinson, Ryan M.; Nothwang, William D.

    2016-01-01

    A novel template matching algorithm that can incorporate the concept of deformable parts, is presented in this paper. Unlike the deformable part model (DPM) employed in object recognition, the proposed template-matching approach called Deformable Template Matching (DTM) does not require a training step. Instead, deformation is achieved by a set of predefined basic rules (e.g. the left sub-patch cannot pass across the right patch). Experimental evaluation of this new method using the PASCAL VO...

  19. CED-10-WASP-Arp2/3 signaling axis regulates apoptotic cell corpse engulfment in C. elegans.

    Science.gov (United States)

    Wu, Dou; Chai, Yongping; Zhu, Zhiwen; Li, Wenjing; Ou, Guangshuo; Li, Wei

    2017-08-01

    Efficient clearance of apoptotic cells is essential for tissue homeostasis in metazoans. Genetic studies in Caenorhabditis elegans have identified signaling cascades that activate CED-10/Rac1 GTPase and promote actin cytoskeletal rearrangement during apoptotic cell engulfment. However, the molecular connection between CED-10 activation and actin reorganization remains elusive. Here, we provide evidence that CED-10 binds to the Arp2/3 nucleation promoting factor WASP; CED-10 recruits WASP and Arp2/3 to apoptotic cell corpses in the phagocytes. The loss of WASP and Arp2/3 impaired cell corpse engulfment. Furthermore, we uncover that a WASP-activating factor SEM-5/GRB2 functions in the phagocytes to promote cell corpse clearance. Together, our results suggest CED-10 reorganizes the actin cytoskeleton by recruiting the WASP-Arp2/3 actin nucleation factors during apoptotic cell engulfment. Copyright © 2017 Elsevier Inc. All rights reserved.

  20. Media and Propaganda: The Northcliffe Press and the Corpse Factory Story of World War I

    Directory of Open Access Journals (Sweden)

    Randal Marlin

    2010-01-01

    Full Text Available Demonization of Germans was an early feature of British propaganda in World War I, with numerous atrocities reported in the Bryce Report, 1915. But in April, 1917, a particularly gripping, gruesome, and odium-inducing tale was given credence by the press of Lord Northcliffe, notably The Times and The Daily Mail.These papers seemed to provide convincing proof that the Germans boiled down corpses of their own soldiers for the purpose of producing useful products such as fats, bone meal, pig food and the like. The story is well known, but significant details have been obscured or misrepresented with regard to the way in which it came to be so widely believed. Our purpose here is to straighten out key elements of the record, based on archival findings, and to draw attention to the techniques employed to ensure widespread credence in this false tale. These techniques, and the principles behind their use, have recent and contemporary parallels, some of which are drawn in this paper. The Corpse Factory story succeeded in its goal, but may have made a lasting peace more difficult. Also, official repudiation of the story in 1925 encouraged later disbelief when early reports circulated about the Holocaust under Hitler, thus contributing to the early lack of response by nations asked to accept Jewish refugees.

  1. Visual cluster analysis and pattern recognition methods

    Science.gov (United States)

    Osbourn, Gordon Cecil; Martinez, Rubel Francisco

    2001-01-01

    A method of clustering using a novel template to define a region of influence. Using neighboring approximation methods, computation times can be significantly reduced. The template and method are applicable and improve pattern recognition techniques.

  2. Crystallization of organically templated phosphomolybdate cluster ...

    Indian Academy of Sciences (India)

    tion polymers, etc.) for a crystal obtained from a set of reacting molecules.12 Formation of a crystalline sub- stance should not be represented by a simple equation as crystallization is a supramolecular reaction.13 We could employ retrosynthesis,14 the crystal engineering tool to postulate the possible ways in which tectons.

  3. Comparison between fingerprints of the epidermis and dermis: Perspectives in the identifying of corpses.

    Science.gov (United States)

    Mizokami, Leila Lopes; Silva, Lara Rosana Vieira; Kückelhaus, Selma Aparecida Souza

    2015-07-01

    In forensic science, the putrefaction, maceration, mummification or burning make it difficult to collect the fingerprints of the epidermis for identification purposes. In such cases, the comparison between fingerprints collected from the dermal surface and the ante mortem pattern of the epidermal surface archived in databases must be performed. Therefore, considering that the identification of corpses is done by comparison of fingerprints on different surfaces, this study aimed to compare the epidermal and the dermal fingerprints to determine the discrepancies between the minutiae of both surfaces. The study was conducted with excised fingers of 19 fresh adult corpses. Once selected, excised and photographed, the fingers were subjected to maceration with 0.5% acetic acid solution for the removal of the epidermal glove and for registering the dermal fingerprint. Then, an area of 1cm(2) in the epidermal and dermal photographies was selected and the minutiae of each were separately marked by an expert in identification. The comparison between minutiae of the epidermal and dermal surfaces showed that: (1) both surfaces maintained the patterns and characteristics of fingerprints (arch, whorl or loop) and the characteristics related to the systems and the disposal of the lines, meaning the formation or not of deltas; (2) the total number of marked minutiae did not differ between both surfaces for the group of individuals (paired t test, p=0.48); (3) the percentage of coincidences and divergences (minutiae present on only one surface) between minutiae were 63.0±20.0% and 37.0±20.0%, respectively; (4) identification was possible for 16 fingers/individuals, but not for 3 of them; (5) the increase in the number of marked minutiae does not affect the percentage of coincidences. Our results demonstrate the feasibility of the dermal surface for identification purposes due to the high percentage of matching minutiae, but considering the discrepancies and the inconclusive

  4. Dissection of Lower and Upper Jaws Could They Be Efficiently Examined Without Isolation From the Corpse

    Directory of Open Access Journals (Sweden)

    Hüseyin Afşin

    2001-04-01

    Full Text Available In some cases, for detailed intraoral examination it may be necessary that the upper and lower jaws of a corpse should be removed in such a way to cause the least traumatic change. It is difficult but compulsory to identify by dental examination the corpses particularly who/which are found to have foreign bodies such as stones and/or soil in the mouths because of being hurried under the ground and who have completed mortal rigidness or are frozen. At the end of this process, it is important that, the external view of the corpse not be spoiled. In this study a dissection technique which had been developed before was improved, and attempts were made to modifiy it. For this aim the muscular tissues sur-ronding the mouth of one case were dissected and the lower and upper jaws removed from the body by cutting the bone tissues. The most difficult problem faced when examining the structures forming the oral cavity is the elimination of mortal rigidness in cases in which it has reached a maximum level. Applying improper force on the teeth and mucosa may cause demage which makes it difficult to distinguish whether such damage has happened antemortem or postmortem. Even if it is possible for the mouth to be fully opened it is still not easy to obtain sample tissue and furthermore dental modelling or getting an x-ray of the area is impossible. External suturing following the autopsy in the case of an incorrect method applied while dissecting the cheeks may make the kins of dead person irritated. When identification is necessary, findings about the number of teeth, the number of decayed ones, fillings crowns and bridges should be recorded without fail. The modelling of the teeth is important from the view of making easy comparisons in future and obtaining reliable evidence. A good photography in which the teeth are clearly discernible will enable the dead persons relatives to remember his/her features that can not be described when asked to. A dental model

  5. Small GTPase CDC-42 promotes apoptotic cell corpse clearance in response to PAT-2 and CED-1 in C. elegans.

    Science.gov (United States)

    Neukomm, L J; Zeng, S; Frei, A P; Huegli, P A; Hengartner, M O

    2014-06-01

    The rapid clearance of dying cells is important for the well-being of multicellular organisms. In C. elegans, cell corpse removal is mainly mediated by three parallel engulfment signaling cascades. These pathways include two small GTPases, MIG-2/RhoG and CED-10/Rac1. Here we present the identification and characterization of CDC-42 as a third GTPase involved in the regulation of cell corpse clearance. Genetic analyses performed by both loss of cdc-42 function and cdc-42 overexpression place cdc-42 in parallel to the ced-2/5/12 signaling module, in parallel to or upstream of the ced-10 module, and downstream of the ced-1/6/7 module. CDC-42 accumulates in engulfing cells at membranes surrounding apoptotic corpses. The formation of such halos depends on the integrins PAT-2/PAT-3, UNC-112 and the GEF protein UIG-1, but not on the canonical ced-1/6/7 or ced-2/5/12 signaling modules. Together, our results suggest that the small GTPase CDC-42 regulates apoptotic cell engulfment possibly upstream of the canonical Rac GTPase CED-10, by polarizing the engulfing cell toward the apoptotic corpse in response to integrin signaling and ced-1/6/7 signaling in C. elegans.

  6. S-template

    Directory of Open Access Journals (Sweden)

    Jitendra Bhagchandani

    2014-01-01

    Full Text Available Recently introduced Yen angle and W angle suggest the use of center of premaxilla (M and mandibular symphysis (G as landmarks for assessing sagittal jaw base discrepancies. These landmarks have been considered to be more stable than traditionally used points A and B. This article is an attempt to develop a simple tool that will enable the clinician to identify the centers of premaxilla and mandibular symphysis and hence the name Simplified template, i.e., S-template. This tool would aid the orthodontist in locating the centroids of maxilla and mandibular symphysis more easily and accurately than prefabricated templates.

  7. Collection of intraoral findings in corpse with small-scale color dental scanner system.

    Science.gov (United States)

    Yoshida, Masaki; Hanaoka, Yoichi; Tsuzuki, Tamiyuki; Ueno, Asao; Takagi, Tetsuya; Iwahara, Kaori; Yasuda, Mamoru; Sato, Yoshinobu; Minaguchi, Kiyoshi

    2009-03-10

    Together with X-ray radiography and the description in the dental chart (odontogram), the collection of intraoral images is extremely important in dental identification. Recently, thanks to advances in digital devices for taking images in the oral cavity, problems with developing images and images being lost due to scanning errors have been minimized. However, in corpses where postmortem rigidity has firmly set in and burned bodies where the jaw has to be forced open, it is difficult to open the jaw enough to allow images to be taken. In addition, collection of intraoral images requires skill. Our goal was to determine the efficacy of a newly developed, small-scale color dental scanner in collecting intraoral images. The results showed that it was comparatively easy to obtain an entire image of the oral cavity with even a minimum degree of jaw opening. This should enable even a non-expert to perform oral image collection.

  8. Corpse dismemberment in the material collected by the Department of Forensic Medicine, Cracow, Poland.

    Science.gov (United States)

    Konopka, Tomasz; Strona, Marcin; Bolechała, Filip; Kunz, Jerzy

    2007-01-01

    In this study, we present 23 cases of dismembered bodies examined by the Cracow Department of Forensic Medicine in 1968-2005 period. Presented material includes 17 instances of defensive mutilation, three instances of offensive mutilation and two cases when dismemberment (decapitation) was a direct cause of death. One case is hard to classified, the perpetrator dissected free skin from the all torso. Analysis of all presented cases and other publications concentrating on the problem of dismemberment gave us the possibility to perform some conclusions. Apart from rare cases of necrophilia, the victim of dismemberment is always a victim of homicide. Homicides ending with corpse dismemberment are most commonly committed by a person close to, or at least acquainted with the victim and they are performed at the site of homicide, generally in the place inhabited by the victim, the perpetrator or shared by both. Such instances are generally not planned by the perpetrator and rarely serial in character.

  9. Quality improvement of fingerprints of decayed corpses by local thanatopractical processing (Thanatoprint).

    Science.gov (United States)

    Gahr, Britta; Drewitz, M; Vöth, R; Ritz-Timme, S

    2013-01-01

    Thanatopractical processing allows morphological reconstruction of even advanced decayed bodies. By extracting fluids from the body's tissue antemortem tenseness and volume can be restored. If bodies are partly subject to thanatopractical processing in the hand region ("Thanatoprint"), fingerprints of high quality can be gathered even in cases of advanced decay. Without this treatment fingerprinting can be extremely difficult, if not impossible. Thanatopractical processing could be applied successfully in cases of partial to subtotal detachment of the epidermis as well. In an interdisciplinary study 400 fingerprints of bodies in various states of decay were examined after application of Thanatoprint. In 76.75% fingerprints were applicable for data entry into AFIS (Automated Fingerprint Identification System); another 11.00% of the fingerprints could be used for the process of non-elimination. Further advantages of the method are low invasivity while maintaining the integrity of the corpse, less time- and material requirement as well as its long-lasting effect.

  10. May Ingestion of Leachate from Decomposed Corpses Cause Appendicitis? A Case Report

    Directory of Open Access Journals (Sweden)

    Maurício Domingues-Ferreira

    2011-01-01

    Full Text Available The general consensus is that appendicitis is basically provoked by fecaliths or lymphoid hyperplasic obstruction. Several studies based on histological diagnosis have not confirmed this hypothesis. On the contrary, obstruction has been proved in only a minority of cases. Diverse infections by parasites, bacteria, fungus, and noninfective agents have been associated with appendicitis in the medical literature. We describe a firefighter, who ingested a small quantity of leachate from decomposing corpses while working and developed enteritis a few hours later, which lasted several days and evolved to appendicitis. This case raises the possibility that the high quantity of bacteria concentration present in the leachate could have provoked enteritis and the subsequent appendicitis due to a direct effect of the bacteria on the appendix.

  11. Homicides with corpse dismemberment in the material collected by the Department of Forensic Medicine, Krakow, Poland

    Directory of Open Access Journals (Sweden)

    Tomasz Konopka

    2017-06-01

    Full Text Available Aim of the study : To determine the circumstances which can be useful for offenders profiling in homicide cases with victim’s body dismemberment. Material and methods: Study of all homicide cases with victim’s corpse dismemberment examined in Krakow Department of Forensic Medicine over the last 50 years. Results : Within the past 50 years, a total number of 30 cases of homicides with dismembered bodies were examined in Krakow. 22 cases represent defensive mutilations performed by offender, 3 cases can be classified as offensive muti­lations and 3 cases represent aggressive mutilations – decapitation as a method of committing homicide. In this period the only 1 case of necrophilic mutilations was examined, when the body was dismembered without murder. In most cases the background of homicide was the family conflict, 6 was cause of mental illness of perpetrator and in 3 was sexual motive. Only in 3 cases (from 25 when the offender was known perpetrator kill a stranger. In the other the offender belonged to the family or friends of the victim. In all cases where the perpetrator was determined, homicide and dismemberment was performed in his place of residence. The findings of the Police investigations indicate that in most cases homicides were not planned, occurred under the influence of emotion, only two have been previously scheduled. Conclusions : Homicides with corpses dismemberment usually are committed by offenders who is in close relationship with victim (family or friend. Dismemberment is almost always performed in the same place as murder – home of perpetrator. This type of homicide usually is not planned.

  12. A fast template periodogram

    Directory of Open Access Journals (Sweden)

    Hoffman John

    2017-01-01

    Full Text Available This proceedings contribution presents a novel, non-linear extension to the Lomb-Scargle periodogram that allows periodograms to be generated for arbitrary signal shapes. Such periodograms are already known as “template periodograms” or “periodic matched filters,” but current implementations are computationally inefficient. The “fast template periodogram” presented here improves existing techniques by a factor of ∼a few for small test cases (O(10 observations, and over three orders of magnitude for lightcurves containing O(104 observations. The fast template periodogram scales asymptotically as O(HNf log HNf + H4Nf, where H denotes the number of harmonics required to adequately approximate the template and Nf is the number of trial frequencies. Existing implementations scale as O(NobsNf, where Nobs is the number of observations in the lightcurve. An open source Python implementation is available on GitHub.

  13. A fast template periodogram

    Science.gov (United States)

    Hoffman, John; VanderPlas, Jake; Hartman, Joel; Bakos, Gáspár

    2017-09-01

    This proceedings contribution presents a novel, non-linear extension to the Lomb-Scargle periodogram that allows periodograms to be generated for arbitrary signal shapes. Such periodograms are already known as "template periodograms" or "periodic matched filters," but current implementations are computationally inefficient. The "fast template periodogram" presented here improves existing techniques by a factor of ˜a few for small test cases (O(10) observations), and over three orders of magnitude for lightcurves containing O(104) observations. The fast template periodogram scales asymptotically as O(HNf log HNf + H4Nf), where H denotes the number of harmonics required to adequately approximate the template and Nf is the number of trial frequencies. Existing implementations scale as O(NobsNf), where Nobs is the number of observations in the lightcurve. An open source Python implementation is available on GitHub.

  14. [Euripides and Heraclitus on the attitude towards the corpse--an unrecognized fragment of Heraclitus in Electra, v. 289].

    Science.gov (United States)

    Moog, Ferdinand Peter

    2007-01-01

    Among the fragments of Heraclitus preserved to our times there is one saying that corpses ought to be disposed of more urgently than excrements Diels/Kranz 22 B 96. This sentence of an aphoristic nature, as frequently in the case of Heraclitus' scripts, allows many different interpretations. Even in antiquity these words led to vitriolic reactions and perplexed other writers. It is why they have been frequently quoted. Nevertheless, it has been overlooked until now that Euripides, the youngest of the three great Attic tragedians, had inserted them into one of his dramas. In his Electra it is the title figure who uses them while reporting the slaughter of Agamemnon. The quotation bears witness to Euripides' erudition as of one of the earliest men known to have possessed a private library. He must, therefore, have had access to many treatises on various subjects, among them to the work by Heraclitus. The Electra is a kind of homage to the obscure thinker from Ephesus. From this fact, and from the plot of this particular play, we may gain some insight into an ambivalent attitude of the ancient Greeks towards the corpse that certainly influenced ideas about human anatomy in particular and medical knowledge in general. A characteristic feature of the malefactors, namely Aigisthos and Clytaimestra, is the deliberate dishonouring of their victims corpse. By contrast, the noble characters Orestes and Electra never violate the corpse of their arch-enemy Aigisthos, but see to it that he is properly buried. Burial was, particularly in Athens, so essential that in the well-known Arginusai trial the failure to bury the fallen soldiers resulted in capital punishment for the accused. Nevertheless, it is likely that Euripides, following Heraclitus, did not reject the anatomical examination of corpses for scientific purposes, as he was not only in this regard a supporter of science and progress. Perhaps Plato's notion of the human body as the tomb of the soul is foreshadowed here

  15. Biometric Template Security

    Directory of Open Access Journals (Sweden)

    Abhishek Nagar

    2008-03-01

    Full Text Available Biometric recognition offers a reliable solution to the problem of user authentication in identity management systems. With the widespread deployment of biometric systems in various applications, there are increasing concerns about the security and privacy of biometric technology. Public acceptance of biometrics technology will depend on the ability of system designers to demonstrate that these systems are robust, have low error rates, and are tamper proof. We present a high-level categorization of the various vulnerabilities of a biometric system and discuss countermeasures that have been proposed to address these vulnerabilities. In particular, we focus on biometric template security which is an important issue because, unlike passwords and tokens, compromised biometric templates cannot be revoked and reissued. Protecting the template is a challenging task due to intrauser variability in the acquired biometric traits. We present an overview of various biometric template protection schemes and discuss their advantages and limitations in terms of security, revocability, and impact on matching accuracy. A template protection scheme with provable security and acceptable recognition performance has thus far remained elusive. Development of such a scheme is crucial as biometric systems are beginning to proliferate into the core physical and information infrastructure of our society.

  16. Joomla! 3 template essentials

    CERN Document Server

    Frankowski, Pawel

    2013-01-01

    Using this hands-on, step-by step tutorial filled with practical examples, the readers will be able to create beautiful templates and themes for your websites that will make them stand out from others.This book is written for all of you who wish to create your own unique templates for Joomla! 3.x. This book can be used by Joomla! administrators or visual designers (with no programming experience) or those of you who are used to working with common web developer tools like HTML/CSS editors for coding purposes. You would need basic knowledge of Joomla! and some knowledge of CSS and HTML.

  17. Computing layouts with deformable templates

    KAUST Repository

    Peng, Chihan

    2014-07-27

    In this paper, we tackle the problem of tiling a domain with a set of deformable templates. A valid solution to this problem completely covers the domain with templates such that the templates do not overlap. We generalize existing specialized solutions and formulate a general layout problem by modeling important constraints and admissible template deformations. Our main idea is to break the layout algorithm into two steps: a discrete step to lay out the approximate template positions and a continuous step to refine the template shapes. Our approach is suitable for a large class of applications, including floorplans, urban layouts, and arts and design. Copyright © ACM.

  18. A scream from the past: a multidisciplinary approach in a concealment of a corpse found mummified.

    Science.gov (United States)

    Gitto, Lorenzo; Bonaccorso, Luigi; Maiese, Aniello; dell'Aquila, Massimiliano; Arena, Vincenzo; Bolino, Giorgio

    2015-05-01

    When a mummified body is found, it requires the forensic pathologist to determine the manner and cause of death. The mummified body of an older man was found walled in an alcove in a silicon-sealed bedroom, in a semi-supine position with the back on the floor and the legs on the wall. Two plastic bags covered the body. Having removed the plastic bags, the body was fully wrapped in a brown adhesive tape. At the scene, there was no evidence of microfauna. The subject's son stated that after his father's death, he concealed the corpse in order to obtain his annual pension. A postmortem CT scan was performed before the autopsy, which excluded traumatic injuries. The autopsy together with the toxicological and microscopic findings helped us to understand the manner of death. In this case, the mummification process developed under specific environmental conditions and a multidisciplinary approach was required in order to solve it. Copyright © 2015 Elsevier Ltd and Faculty of Forensic and Legal Medicine. All rights reserved.

  19. Corpses of Metaphor. Images of Death in David Leavitt and Jamaica Kincaid

    Directory of Open Access Journals (Sweden)

    Fiorenzo Iuliano

    2010-10-01

    Full Text Available This essay analyzes two works, My Brother by Jamaica Kincaid, and "Saturn Street" by David Leavitt, investigating the construction of homosexuality as a process accomplished by resorting to illness (AIDS and death. In both works, indeed, the slow and dramatic course of AIDS amounts to the progressive unveiling of homosexuality as a social threat or a cause of anxiety and repulsion. The two works are set in different contexts: whereas Jamaica Kincaid refers to the problematic situation of homosexuality in the Caribbean, David Leavitt explores the social and cultural scenario of the 1990s Los Angeles, in the wake of a by now ended utopian confidence in science and technology.  This comparative approach helps us understand the political dynamics through which, in different and, to some extents, opposite realities, the social stigma of AIDS worked as a means to construct homosexual identity and set it apart from the sanitized spectrum of normal and sanctioned sexual behaviors. The point I want to make in this essay is that the corpse is used as an effective metaphor for a dehumanized depiction of male homosexual and ill subjects.

  20. Economic, human and environmental health benefits of replacing formaldehyde in the preservation of corpses.

    Science.gov (United States)

    Rocha Ferreira, Jussara; Cardoso Rezende, Lorenna; Barbosa, Abel De Souza; De Carvalho, Phellip; De Lima, Natácia Evangelista; Assis Carvalho, Alexandre

    2017-11-01

    Formaldehyde has been prominent in preserving biological tissues since the nineteenth century. Despite being admittedly harmful to health and to the environment, it is still widely used. The Morphology Department of the University of Brasília - Brazil, applied the rethink, reduce, reuse, recycle and responsibility methodology to their activities in an effort to protect the health of laboratory workers and users, save resources and reduce damage to the environment. Here we evaluate the results obtained a decade after the implementation of this proposal (2005-2015). Formaldehyde was replaced by alcohol and glycerol solutions in corpse conservation. Over five thousand dollars in public funds that would have been destined to buying preserving substances were saved annually, and over a hundred thousand liters of water that would have been contaminated and thrown into the sewage system were spared. The environment used to implement the study was improved and anatomical parts kept for study had their lifespan extended. It is noteworthy that such simple adjustments could cause pronounced changes in laboratory activities. We would avoid contaminating billions of liters of water and it would be possible to save millions if similar practices were implemented in all educational institutions having similar routines. Copyright © 2017 Elsevier Inc. All rights reserved.

  1. Quality improvement of fingerprints of decayed corpses by local thanatopractical processing (Thanatoprint

    Directory of Open Access Journals (Sweden)

    Gahr, Britta

    2013-11-01

    Full Text Available Thanatopractical processing allows morphological reconstruction of even advanced decayed bodies. By extracting fluids from the body’s tissue antemortem tenseness and volume can be restored. If bodies are partly subject to thanatopractical processing in the hand region (“Thanatoprint”, fingerprints of high quality can be gathered even in cases of advanced decay. Without this treatment fingerprinting can be extremely difficult, if not impossible. Thanatopractical processing could be applied successfully in cases of partial to subtotal detachment of the epidermis as well. In an interdisciplinary study 400 fingerprints of bodies in various states of decay were examined after application of Thanatoprint. In 76.75% fingerprints were applicable for data entry into AFIS (Automated Fingerprint Identification System; another 11.00% of the fingerprints could be used for the process of non-elimination. Further advantages of the method are low invasivity while maintaining the integrity of the corpse, less time- and material requirement as well as its long-lasting effect.

  2. War and Violence in Sinan Antoon’s The Corpse Washer

    Directory of Open Access Journals (Sweden)

    Radwa Ramadan Mahmoud

    2016-03-01

    Full Text Available War is the greatest source of violence in the world. It is the most disastrous expression of tendencies to violence innate to human nature. Iraq has suffered for a long time from the repercussions of war and violence and in this country ravaged by war trauma; the only space left for memory has been literature. Personal and political traumas have characterized the works of Iraqi writers who have been either victims of traumatic experience themselves or have been firsthand witnesses to trauma in Iraq. Literature provides them with an avenue to reclaim the humanity of all those who have been traumatized by the violence represented by war. Drawing on the theory of trauma, the paper seeks to explore the notions of war trauma and violence in Sinan Antoon's novel The Corpse Washer (2014 that reveals Iraq’s traumatic and violent history. The paper examines the ways in which the novel bears witness to, protests against and exposes the devastating effects of war and violence.

  3. Cultures of death and politics of corpse supply: anatomy in Vienna, 1848-1914.

    Science.gov (United States)

    Buklijas, Tatjana

    2008-01-01

    Nineteenth-century Vienna is well known to medical historians as a leading center of medical research and education, offering easy access to patients and corpses to students from all over the world. The author seeks to explain how this enviable supply of cadavers was achieved, why it provoked so little opposition at a time when Britain and the United States saw widespread protests against dissection, and how it was threatened from mid-century onward. To understand permissive Viennese attitudes, we need to place them in a longue durée history of death and dissection and to pay close attention to the city's political geography as it was transformed into a major imperial capital. The tolerant stance of the Roman Catholic Church, strong links to Southern Europe, and the weak position of individuals in the absolutist state all contributed to an idiosyncratic anatomical culture. But as the fame of the Vienna medical school peaked in the later 1800s, the increased demand created by rising numbers of students combined with intensified interdisciplinary competition to produce a shortfall that professors found increasingly difficult to meet. Around 1900, new religious groups and mass political parties challenged long-standing anatomical practice by refusing to supply cadavers and making dissection into an instrument of political struggle. This study of the material preconditions for anatomy at one of Europe's most influential medical schools provides a contrast to the dominant Anglo-American histories of death and dissection.

  4. Distinction among the puparia of three blowfly species (Diptera: Calliphoridae) frequently found on unburied corpses.

    Science.gov (United States)

    Amorim, J A; Ribeiro, O B

    2001-08-01

    Calliphorid larvae are important in the decomposition of carrion. Since these larvae are present in the primary stages of succession on carcasses, they may be important indicators of death time and the movement of corpses in homicide investigations. In this study we examined the morphological differences among puparia of Chrysomya megacephala, C. putoria and Cochliomyia macellaria. Puparia of the three species (N=30, each) were obtained from the F2 generation bred in culture medium at 25 degrees C, and 60% relative humidity on a 12 h photoperiod. The interspecific differences found were related to the conspicuousness of six tubercles located in the region near the posterior spiracles and to the distance between the two peritrema involving the spiracles. The latter were (mean +/- SD) 15.2 +/- 3.1 microm for C. megacephala, 18.8 +/- 2.8 microm for C. putoria and 16.5 +/- 3.5 microm for C. macellaria. The results of the present study may be useful in forensic entomology.

  5. Distinction among the puparia of three blowfly species (Diptera: Calliphoridae frequently found on unburied corpses

    Directory of Open Access Journals (Sweden)

    Amorim JA

    2001-01-01

    Full Text Available Calliphorid larvae are important in the decomposition of carrion. Since these larvae are present in the primary stages of succession on carcasses, they may be important indicators of death time and the movement of corpses in homicide investigations. In this study we examined the morphological differences among puparia of Chrysomya megacephala, C. putoria and Cochliomyia macellaria. Puparia of the three species (N=30, each were obtained from the F2 generation bred in culture medium at 25° C, and 60% relative humidity on a 12 h photoperiod. The interspecific differences found were related to the conspicuousness of six tubercles located in the region near the posterior spiracles and to the distance between the two peritrema involving the spiracles. The latter were (mean ± SD 15.2 ± 3.1 mum for C. megacephala, 18.8 ± 2.8 mum for C. putoria and 16.5 ± 3.5 mum for C. macellaria. The results of the present study may be useful in forensic entomology.

  6. Anatomical departments in Bavaria and the corpses of executed victims of National Socialism.

    Science.gov (United States)

    Noack, Thorsten

    2012-06-01

    While it is known that the bodies of executed victims of National Socialism (NS) were used for anatomical research and teaching, detailed studies are still missing for many anatomical departments. This analysis focuses on the institutes in Bavaria. From 1933 on the institutes of Munich, Würzburg and Erlangen were actively involved in and competed over the procurement of bodies of NS victims, particularly between 1937 and 1941. While the body supply was sufficient thereafter it became again critical in the first years after the war. During that period, anatomists complained about a lack of bodies for dissection courses and tended to use the corpses remaining from the NS-period for teaching purposes. Their position was supported by the popular view that resistance fighters were seen as traitors to the Fatherland and not as honorable political victims. At the same time, relatives and aid organizations were in search of the dead victims of German terror. These conflicting interests created a situation full of tension, in which Philipp Auerbach, state commissioner for religious, political and racial victims of the Nazis in Bavaria, played a crucial role. Copyright © 2012 Elsevier GmbH. All rights reserved.

  7. The phosphoinositide phosphatase MTM-1 regulates apoptotic cell corpse clearance through CED-5-CED-12 in C. elegans.

    Science.gov (United States)

    Neukomm, Lukas Jakob; Nicot, Anne-Sophie; Kinchen, Jason Michael; Almendinger, Johann; Pinto, Sérgio Morgado; Zeng, Sheng; Doukoumetzidis, Kimon; Tronchère, Hélène; Payrastre, Bernard; Laporte, Jocelyn Franck; Hengartner, Michael Otmar

    2011-05-01

    Multicellular organisms use programmed cell death to eliminate unwanted or potentially harmful cells. Improper cell corpse removal can lead to autoimmune diseases. The development of interventional therapies that increase engulfment activity could represent an attractive approach to treat such diseases. Here, we describe mtm-1, the Caenorhabditis elegans homolog of human myotubularin 1, as a potential negative regulator of apoptotic cell corpse clearance. Loss of mtm-1 function leads to substantially reduced numbers of persistent cell corpses in engulfment mutants, which is a result of a restoration of engulfment function rather than of impaired or delayed programmed cell death. Epistatic analyses place mtm-1 upstream of the ternary GEF complex, which consists of ced-2, ced-5 and ced-12, and parallel to mig-2. Over-activation of engulfment results in the removal of viable cells that have been brought to the verge of death under limiting caspase activity. In addition, mtm-1 also promotes phagosome maturation in the hermaphrodite gonad, potentially through CED-1 receptor recycling. Finally, we show that the CED-12 PH domain can bind to PtdIns(3,5)P(2) (one target of MTM-1 phosphatase activity), suggesting that MTM-1 might regulate CED-12 recruitment to the plasma membrane.

  8. Cutting the cost of well clusters

    Energy Technology Data Exchange (ETDEWEB)

    Esau, I.

    1995-09-01

    This article focuses on recent subsea systems based on satellite wells clustered around a central manifold instead of the conventional systems which use multiwell templates with integrated manifolds. Advantages of the Unitised Well Cluster developed by Sonsub are discussed. (UK)

  9. Template Composite Dark Matter

    DEFF Research Database (Denmark)

    Drach, Vincent; Hietanen, Ari; Pica, Claudio

    2015-01-01

    We present a non perturbative study of SU(2) gauge theory with two fundamental Dirac flavours. We discuss how the model can be used as a template for composite Dark Matter (DM). We estimate one particular interaction of the DM candidate with the Standard Model : the interaction through photon...

  10. The Cadastral Template Project

    DEFF Research Database (Denmark)

    Enemark, Stig; Steudler, Daniel; Williamson, Ian P.

    2004-01-01

      While many country reports have been compiled in the area of land administration over the last decade, there has not much attention been given to the basic cadastral issues. As a result, one of the objectives of Working Group 3 ?Cadastre? of the PCGIAP is the establishment of a cadastral template...

  11. NLG vs. Templates

    CERN Document Server

    Reiter, E R

    1995-01-01

    One of the most important questions in applied NLG is what benefits (or `value-added', in business-speak) NLG technology offers over template-based approaches. Despite the importance of this question to the applied NLG community, however, it has not been discussed much in the research NLG community, which I think is a pity. In this paper, I try to summarize the issues involved and recap current thinking on this topic. My goal is not to answer this question (I don't think we know enough to be able to do so), but rather to increase the visibility of this issue in the research community, in the hope of getting some input and ideas on this very important question. I conclude with a list of specific research areas I would like to see more work in, because I think they would increase the `value-added' of NLG over templates.

  12. Templating mesoporous zeolites

    DEFF Research Database (Denmark)

    Egeblad, Kresten; Christensen, Christina Hviid; Kustova, Marina

    2008-01-01

    phase. It is shown that the available templating approaches are quite versatile, and accordingly, it is possible to produce a very wide range of hierarchical zeolite materials. The resulting zeolite materials, featuring noncrystallographic mesopores in addition to the crystallographic micropores......, exhibit significantly enhanced diffusional properties in comparison with purely microporous zeolite materials. These enhanced mass transport properties have been shown in several cases to result in significantly improved catalytic properties in a range of important reactions....

  13. Psychological Stress In First Year Medical Students In Response To The Dissection Of A Human Corpse

    Science.gov (United States)

    Bernhardt, Veronika; Rothkötter, Hermann Josef; Kasten, Erich

    2012-01-01

    the confrontation with corpses. Furthermore, personality tests were shown to be only partly reliable for selecting affected people in advance. With regard to these results capabilities to provide support to the first year medical students should be discussed. PMID:22403597

  14. Psychological stress in first year medical students in response to the dissection of a human corpse.

    Science.gov (United States)

    Bernhardt, Veronika; Rothkötter, Hermann Josef; Kasten, Erich

    2012-01-01

    Gross anatomy is one of the most important and time consuming subjects in the first preclinical part of medical school in Germany. In October 2007 186 students started the dissection course at Otto-von-Guericke-University Magdeburg. The objective of this study is to analyze the emotional aspect relating to the gross anatomy course. In order to address this issue, we investigated how medical students experience the first confrontation and the following exposure to the dead bodies and whether there are any differences between various groups (age, gender, experience) of students. The study was carried out with a group of 155 first year medical students (112 female, 43 male, 21.4±2.9 years). Self-composed questionnaires were used to distinguish between concerns related to dissection and individual experiences and anxiety because of deceasing or death. In order to detect the changes of attitudes towards the dissection course, one questionnaire was answered by participants in the beginning of the course and one in the end (n=94, 66 female, 28 male). Additionally, personality traits of the students were analyzed using two scales of the "Freiburger Persönlichkeitsinventar (FPI-R)". The self-composed questionnaires showed high reliability. For some students dissection was emotional stress; about 50% became anxious when coping the first confrontation, however, only 12% to large extent. Concerning the anxiety of dissection of individual body parts it was less for limbs, internal organs and skin and increased for head and genitals. Although hypothesized before, the correlation between age, extraversion, emotionality and the extent of anxiety were small. Almost 90% of the students approve the early beginning of the gross anatomy course. The follow-up study showed a marked decline of anxiety. Our results show that about 50% of the students started the course with emotional stress and about one-tenth of them were very worried about the confrontation with corpses. Furthermore

  15. European Council of Legal Medicine (ECLM) principles for on-site forensic and medico-legal scene and corpse investigation.

    Science.gov (United States)

    Cusack, D; Ferrara, S D; Keller, E; Ludes, B; Mangin, P; Väli, M; Vieira, N

    2017-07-01

    Forensic medical practitioners need to define the general principles governing procedures to be used for the on-site examination of a body where the death has occurred in unnatural, violent or suspicious circumstances. These principles should be followed whenever a medical expert is required to perform an on-site corpse inspection and should be utilised as a set of general guidelines to be adapted to the specific situation in hand and interpreted using common sense and scientific knowledge of the relevant procedures and facts of the case. The aim of these principles is to ensure that forensic evidence at the scene of a death is properly observed and assessed and all necessary relevant evidence gathered in order to ensure that a comprehensive report is available to the judicial authority (investigating judge or coroner) in the justice system. The on-site corpse inspection by a forensic practitioner is a mandatory and essential stage of the forensic and medico-legal autopsy, as it may provide important information for subsequent investigation stages.

  16. A Deformable Template Model, with Special Reference to Elliptical Templates

    DEFF Research Database (Denmark)

    Hobolth, Asger; Pedersen, Jan; Jensen, Eva Bjørn Vedel

    2002-01-01

    This paper suggests a high-level continuous image model for planar star-shaped objects. Under this model, a planar object is a stochastic deformation of a star-shaped template. The residual process, describing the difference between the radius-vector function of the template and the object...

  17. [Biometric ranging of the corpses destroyed at the site of a catastrophe in terms of gender, longitudinal and circumferencial dimensions, and the degree of subcutaneous fat distribution].

    Science.gov (United States)

    Zviagin, V N; Galitskaia, O I; Negasheva, M A

    2012-01-01

    The quantitative criteria for biometric ranging of destroyed corpses in terms of anatomical localization, gender, longitudinal length, trunk circumference, and the folds of subcutaneous fat are proposed. The wealth of anthropometric materials obtained in the studies of various Caucasoid populations was used to calculate the normative tables for biometric ranging of the decomposed corpses. The proposed technology excludes the subjective assessments for the purpose of such classification at the sites of catastrophes. Moreover, it promotes the accumulation of the variety of valuable information, such as the size of the collar, headwear, and footwear, clothing size and height, and portrait features, that can be used for victim identification.

  18. Analysis of the symmetric configuration of the circle of Willis in a series of autopsied corpses.

    Science.gov (United States)

    Stojanović, Nebojga; Stefanović, Ivica; Kostić, Aleksandar; Radisavejević, Misa; Stojanov, Dragan; Petrović, Sladjana

    2015-04-01

    The forming of the blood vessels network configuration at the base of the brain and interconnecting of blood vessels during the embryogenesis is directly related to the phylogenetic development of the brain and brain structures. A blood vessel configuration at the brain base, in the form of a ring or a hexagon, stands in direct relation to the perfusion needs of certain parts of the brain during its primary differentiation. The aim of this paper was to determine the incidence of certain blood vessel configurations at the base of the brain and understanding their symmetry or asymmetry. Analysis of the blood vessels at the base of the brain was performed on the autopsied subjects. The object of observation was the anterior segment of the circle of Willis consisting of C1- a. carotis interna (ICA), above a. communicaus posterior (PcoA), the segment A1 a. cerebri anterior (ACA) from a. carotis interna bifurcation to the a. communicans anterior (AcoA) and a communicans anterior itself, as well as the posterior segment consisting of PcoA and the segment P1--a. cerebri posterior (PCA) from the a. basilaris bifurcation to the PcoA. For the purpose of grouping the findings, the four basic configuration types of the circle of Willis were identified based on its symmetry or asymmetry. Type-A (symmetric circle of Willis), type-B (asymmetric circle of Willis' due to the unilateral hypoplastic A1-ACA); type-C (symmetric circle of Willis with bilateral symmetric changes on PcoA) and type-D (asymmetric circle of Willis due to the asymmetric changes on PcoA). Autosy was performed on 56 corpses. A total of 41 (73.2%) subjects were recorded with a symmetric configuration of the circle of Willis', of which 27 (48.2%) subjects had type A and 14 (25%) type C. The asymmetric configuration was present in 15 (26.8%) subjects, of whom 9 (16%) had type B and 6 (10.8%) subjects, of whom 9 (16%) had type B and 6 (10.8%) type D. The symmetric Willis group (73.2%) did not have a homogeneous

  19. Cloning nanocrystal morphology with soft templates

    Science.gov (United States)

    Thapa, Dev Kumar; Pandey, Anshu

    2016-08-01

    In most template directed preparative methods, while the template decides the nanostructure morphology, the structure of the template itself is a non-general outcome of its peculiar chemistry. Here we demonstrate a template mediated synthesis that overcomes this deficiency. This synthesis involves overgrowth of silica template onto a sacrificial nanocrystal. Such templates are used to copy the morphologies of gold nanorods. After template overgrowth, gold is removed and silver is regrown in the template cavity to produce a single crystal silver nanorod. This technique allows for duplicating existing nanocrystals, while also providing a quantifiable breakdown of the structure - shape interdependence.

  20. A pilot study of a heuristic algorithm for novel template identification from VA electronic medical record text.

    Science.gov (United States)

    Redd, Andrew M; Gundlapalli, Adi V; Divita, Guy; Carter, Marjorie E; Tran, Le-Thuy; Samore, Matthew H

    2017-07-01

    Templates in text notes pose challenges for automated information extraction algorithms. We propose a method that identifies novel templates in plain text medical notes. The identification can then be used to either include or exclude templates when processing notes for information extraction. The two-module method is based on the framework of information foraging and addresses the hypothesis that documents containing templates and the templates within those documents can be identified by common features. The first module takes documents from the corpus and groups those with common templates. This is accomplished through a binned word count hierarchical clustering algorithm. The second module extracts the templates. It uses the groupings and performs a longest common subsequence (LCS) algorithm to obtain the constituent parts of the templates. The method was developed and tested on a random document corpus of 750 notes derived from a large database of US Department of Veterans Affairs (VA) electronic medical notes. The grouping module, using hierarchical clustering, identified 23 groups with 3 documents or more, consisting of 120 documents from the 750 documents in our test corpus. Of these, 18 groups had at least one common template that was present in all documents in the group for a positive predictive value of 78%. The LCS extraction module performed with 100% positive predictive value, 94% sensitivity, and 83% negative predictive value. The human review determined that in 4 groups the template covered the entire document, with the remaining 14 groups containing a common section template. Among documents with templates, the number of templates per document ranged from 1 to 14. The mean and median number of templates per group was 5.9 and 5, respectively. The grouping method was successful in finding like documents containing templates. Of the groups of documents containing templates, the LCS module was successful in deciphering text belonging to the template

  1. Clustering of scientific citations in Wikipedia

    DEFF Research Database (Denmark)

    Nielsen, Finn Årup

    The instances of templates in Wikipedia form an interesting data set of structured information. Here I focus on the cite journal template that is primarily used for citation to articles in scientific journals. These citations can be extracted and analyzed: Non-negative matrix factorization...... is performed on a (article x journal) matrix resulting in a soft clustering of Wikipedia articles and scientific journals, each cluster more or less representing a scientific topic....

  2. Wide band gap semiconductor templates

    Energy Technology Data Exchange (ETDEWEB)

    Arendt, Paul N. (Los Alamos, NM); Stan, Liliana (Los Alamos, NM); Jia, Quanxi (Los Alamos, NM); DePaula, Raymond F. (Santa Fe, NM); Usov, Igor O. (Los Alamos, NM)

    2010-12-14

    The present invention relates to a thin film structure based on an epitaxial (111)-oriented rare earth-Group IVB oxide on the cubic (001) MgO terminated surface and the ion-beam-assisted deposition ("IBAD") techniques that are amendable to be over coated by semiconductors with hexagonal crystal structures. The IBAD magnesium oxide ("MgO") technology, in conjunction with certain template materials, is used to fabricate the desired thin film array. Similarly, IBAD MgO with appropriate template layers can be used for semiconductors with cubic type crystal structures.

  3. Improved Ant Colony Clustering Algorithm and Its Performance Study

    Directory of Open Access Journals (Sweden)

    Wei Gao

    2016-01-01

    Full Text Available Clustering analysis is used in many disciplines and applications; it is an important tool that descriptively identifies homogeneous groups of objects based on attribute values. The ant colony clustering algorithm is a swarm-intelligent method used for clustering problems that is inspired by the behavior of ant colonies that cluster their corpses and sort their larvae. A new abstraction ant colony clustering algorithm using a data combination mechanism is proposed to improve the computational efficiency and accuracy of the ant colony clustering algorithm. The abstraction ant colony clustering algorithm is used to cluster benchmark problems, and its performance is compared with the ant colony clustering algorithm and other methods used in existing literature. Based on similar computational difficulties and complexities, the results show that the abstraction ant colony clustering algorithm produces results that are not only more accurate but also more efficiently determined than the ant colony clustering algorithm and the other methods. Thus, the abstraction ant colony clustering algorithm can be used for efficient multivariate data clustering.

  4. Improved Ant Colony Clustering Algorithm and Its Performance Study.

    Science.gov (United States)

    Gao, Wei

    2016-01-01

    Clustering analysis is used in many disciplines and applications; it is an important tool that descriptively identifies homogeneous groups of objects based on attribute values. The ant colony clustering algorithm is a swarm-intelligent method used for clustering problems that is inspired by the behavior of ant colonies that cluster their corpses and sort their larvae. A new abstraction ant colony clustering algorithm using a data combination mechanism is proposed to improve the computational efficiency and accuracy of the ant colony clustering algorithm. The abstraction ant colony clustering algorithm is used to cluster benchmark problems, and its performance is compared with the ant colony clustering algorithm and other methods used in existing literature. Based on similar computational difficulties and complexities, the results show that the abstraction ant colony clustering algorithm produces results that are not only more accurate but also more efficiently determined than the ant colony clustering algorithm and the other methods. Thus, the abstraction ant colony clustering algorithm can be used for efficient multivariate data clustering.

  5. [The coordination of the forensic medical service with the medical criminology subdivisions of internal affairs organs in the personal identification of unidentified corpses].

    Science.gov (United States)

    Pashinian, G A; Tuchik, E S

    1997-01-01

    In order to improve the cooperation between medical criminology departments of the organs of home affairs and forensic medical service in personality identification of unidentified corpses, the authors propose amendments to the routine procedure regulated by documents of the Ministry of Home Affairs of the Russian Federation, for these documents are in need of serious correction and revision, so that they conform to the judicial legislation and other documents.

  6. Automated epileptiform spike detection via affinity propagation-based template matching.

    Science.gov (United States)

    Thomas, John; Jing Jin; Dauwels, Justin; Cash, Sydney S; Westover, M Brandon

    2017-07-01

    Interictal epileptiform spikes are the key diagnostic biomarkers for epilepsy. The clinical gold standard of spike detection is visual inspection performed by neurologists. This is a tedious, time-consuming, and expert-centered process. The development of automated spike detection systems is necessary in order to provide a faster and more reliable diagnosis of epilepsy. In this paper, we propose an efficient template matching spike detector based on a combination of spike and background waveform templates. We generate a template library by clustering a collection of spikes and background waveforms extracted from a database of 50 patients with epilepsy. We benchmark the performance of five clustering techniques based on the receiver operating characteristic (ROC) curves. In addition, background templates are integrated with existing spike templates to improve the overall performance. The affinity propagation-based template matching system with a combination of spike and background templates is shown to outperform the other four conventional methods with the highest area-under-curve (AUC) of 0.953.

  7. Supply-Chain Optimization Template

    Science.gov (United States)

    Quiett, William F.; Sealing, Scott L.

    2009-01-01

    The Supply-Chain Optimization Template (SCOT) is an instructional guide for identifying, evaluating, and optimizing (including re-engineering) aerospace- oriented supply chains. The SCOT was derived from the Supply Chain Council s Supply-Chain Operations Reference (SCC SCOR) Model, which is more generic and more oriented toward achieving a competitive advantage in business.

  8. Web Template Extraction Based on Hyperlink Analysis

    Directory of Open Access Journals (Sweden)

    Julián Alarte

    2015-01-01

    Full Text Available Web templates are one of the main development resources for website engineers. Templates allow them to increase productivity by plugin content into already formatted and prepared pagelets. For the final user templates are also useful, because they provide uniformity and a common look and feel for all webpages. However, from the point of view of crawlers and indexers, templates are an important problem, because templates usually contain irrelevant information such as advertisements, menus, and banners. Processing and storing this information is likely to lead to a waste of resources (storage space, bandwidth, etc.. It has been measured that templates represent between 40% and 50% of data on the Web. Therefore, identifying templates is essential for indexing tasks. In this work we propose a novel method for automatic template extraction that is based on similarity analysis between the DOM trees of a collection of webpages that are detected using menus information. Our implementation and experiments demonstrate the usefulness of the technique.

  9. Physical controls on directed virus assembly at nanoscale chemical templates

    Energy Technology Data Exchange (ETDEWEB)

    Cheung, C L; Chung, S; Chatterji, A; Lin, T; Johnson, J E; Hok, S; Perkins, J; De Yoreo, J

    2006-05-10

    Viruses are attractive building blocks for nanoscale heterostructures, but little is understood about the physical principles governing their directed assembly. In-situ force microscopy was used to investigate organization of Cowpea Mosaic Virus engineered to bind specifically and reversibly at nanoscale chemical templates with sub-30nm features. Morphological evolution and assembly kinetics were measured as virus flux and inter-viral potential were varied. The resulting morphologies were similar to those of atomic-scale epitaxial systems, but the underlying thermodynamics was analogous to that of colloidal systems in confined geometries. The 1D templates biased the location of initial cluster formation, introduced asymmetric sticking probabilities, and drove 1D and 2D condensation at subcritical volume fractions. The growth kinetics followed a t{sup 1/2} law controlled by the slow diffusion of viruses. The lateral expansion of virus clusters that initially form on the 1D templates following introduction of polyethylene glycol (PEG) into the solution suggests a significant role for weak interaction.

  10. Design reflowable digital book template

    Science.gov (United States)

    Prasetya, Didik Dwi; Widiyaningtyas, Triyanna; Arifin, M. Zainal; Wahyu Sakti G., I.

    2017-09-01

    Electronic books (e-books or digital books) increasingly in demand and continue to grow in the form of future books. One of the standard format electronic books that potential is EPUB (electronic publication) published by the International Digital Publishing Forum (IDPF). This digital book has major advantages are able to provide interactive and reflowable content, which are not found in another book format, such as PDF. Reflowable content allows the book can be accessed through a variety of reader device, like desktop and mobile with a fit and comfort view. However, because the generating process of an EPUB digital book is not as easy a PDF, so this format is less popular. Therefore, in order to help overcome the existing problems, this paper develops digital reflowable text book templates to support electronic learning, especially in Indonesia. This template can be used by anyone to produce a standard digital book quickly and easily without requiring additional specialized knowledge.

  11. Template based parallel checkpointing in a massively parallel computer system

    Science.gov (United States)

    Archer, Charles Jens [Rochester, MN; Inglett, Todd Alan [Rochester, MN

    2009-01-13

    A method and apparatus for a template based parallel checkpoint save for a massively parallel super computer system using a parallel variation of the rsync protocol, and network broadcast. In preferred embodiments, the checkpoint data for each node is compared to a template checkpoint file that resides in the storage and that was previously produced. Embodiments herein greatly decrease the amount of data that must be transmitted and stored for faster checkpointing and increased efficiency of the computer system. Embodiments are directed to a parallel computer system with nodes arranged in a cluster with a high speed interconnect that can perform broadcast communication. The checkpoint contains a set of actual small data blocks with their corresponding checksums from all nodes in the system. The data blocks may be compressed using conventional non-lossy data compression algorithms to further reduce the overall checkpoint size.

  12. BioAssay templates for the semantic web

    Directory of Open Access Journals (Sweden)

    Alex M. Clark

    2016-05-01

    Full Text Available Annotation of bioassay protocols using semantic web vocabulary is a way to make experiment descriptions machine-readable. Protocols are communicated using concise scientific English, which precludes most kinds of analysis by software algorithms. Given the availability of a sufficiently expressive ontology, some or all of the pertinent information can be captured by asserting a series of facts, expressed as semantic web triples (subject, predicate, object. With appropriate annotation, assays can be searched, clustered, tagged and evaluated in a multitude of ways, analogous to other segments of drug discovery informatics. The BioAssay Ontology (BAO has been previously designed for this express purpose, and provides a layered hierarchy of meaningful terms which can be linked to. Currently the biggest challenge is the issue of content creation: scientists cannot be expected to use the BAO effectively without having access to software tools that make it straightforward to use the vocabulary in a canonical way. We have sought to remove this barrier by: (1 defining a BioAssay Template (BAT data model; (2 creating a software tool for experts to create or modify templates to suit their needs; and (3 designing a common assay template (CAT to leverage the most value from the BAO terms. The CAT was carefully assembled by biologists in order to find a balance between the maximum amount of information captured vs. low degrees of freedom in order to keep the user experience as simple as possible. The data format that we use for describing templates and corresponding annotations is the native format of the semantic web (RDF triples, and we demonstrate some of the ways that generated content can be meaningfully queried using the SPARQL language. We have made all of these materials available as open source (http://github.com/cdd/bioassay-template, in order to encourage community input and use within diverse projects, including but not limited to our own

  13. Observation of the human fetal corpses with maxillofacial malformations. 1. CT and MRI examinations of the fetal cleft lip and/or palate

    Energy Technology Data Exchange (ETDEWEB)

    Saito, Chikara; Nakano, Yoko; Shigematsu, Shiro [Tokyo Dental Coll., Chiba (Japan)] (and others)

    1999-06-01

    Of the various types of congenital malformations, the cleft lip and/or palate is one of the most frequent. Observation of human fetal corpses exhibiting cleft lip and palate is very important to research on its onset of its mechanism and development. In recent years, some of researchers have performed clinical studies on prenatal diagnosis and surgical treatment for the entirey. However, there have hardly been any reports on detailed observations of the maxillofacial structure of a fetus with cleft lip and palate. We seized an opportunity of observing the maxillofacial structure of fetuses with cleft lip and/or palate using three-dimensional CT (3D-CT) and MR imaging as non-disjunctive methods. In the present study, nine fetal corpses having cleft lip and/or palate were examined. The results were as follows: CT and MRI were useful for non-invasive observation of the maxillofacial structure, including soft tissues. Because the osseous tissues of young fetus tissue is not fully mature, observation of bone structures was slightly difficult. When corpses were immersed in formalin for a long time, osseous tissue was decalcified, thus making it difficult to obtain clear images. We could observe the details of the maxillofacial structures such as the alveolar process, the hard palate, the maxillary sinus, the nasal cavity, the nasal bone, and the vomer, in some of the cases. 3D-CT and MR findings observed in the fetuses with cleft lip and/or palate should provide some basement of the imaging diagnosis of congenital disorder. (author)

  14. Functional Programming with C++ Template Metaprograms

    Science.gov (United States)

    Porkoláb, Zoltán

    Template metaprogramming is an emerging new direction of generative programming. With the clever definitions of templates we can force the C++ compiler to execute algorithms at compilation time. Among the application areas of template metaprograms are the expression templates, static interface checking, code optimization with adaption, language embedding and active libraries. However, as template metaprogramming was not an original design goal, the C++ language is not capable of elegant expression of metaprograms. The complicated syntax leads to the creation of code that is hard to write, understand and maintain. Although template metaprogramming has a strong relationship with functional programming, this is not reflected in the language syntax and existing libraries. In this paper we give a short and incomplete introduction to C++ templates and the basics of template metaprogramming. We will enlight the role of template metaprograms, and some important and widely used idioms. We give an overview of the possible application areas as well as debugging and profiling techniques. We suggest a pure functional style programming interface for C++ template metaprograms in the form of embedded Haskell code which is transformed to standard compliant C++ source.

  15. Dynamic Compilation of C++ Template Code

    Directory of Open Access Journals (Sweden)

    Martin J. Cole

    2003-01-01

    Full Text Available Generic programming using the C++ template facility has been a successful method for creating high-performance, yet general algorithms for scientific computing and visualization. However, adding template code tends to require more template code in surrounding structures and algorithms to maintain generality. Compiling all possible expansions of these templates can lead to massive template bloat. Furthermore, compile-time binding of templates requires that all possible permutations be known at compile time, limiting the runtime extensibility of the generic code. We present a method for deferring the compilation of these templates until an exact type is needed. This dynamic compilation mechanism will produce the minimum amount of compiled code needed for a particular application, while maintaining the generality and performance that templates innately provide. Through a small amount of supporting code within each templated class, the proper templated code can be generated at runtime without modifying the compiler. We describe the implementation of this goal within the SCIRun dataflow system. SCIRun is freely available online for research purposes.

  16. I - Template Metaprogramming for Massively Parallel Scientific Computing - Expression Templates

    CERN Multimedia

    CERN. Geneva

    2016-01-01

    Large scale scientific computing raises questions on different levels ranging from the fomulation of the problems to the choice of the best algorithms and their implementation for a specific platform. There are similarities in these different topics that can be exploited by modern-style C++ template metaprogramming techniques to produce readable, maintainable and generic code. Traditional low-level code tend to be fast but platform-dependent, and it obfuscates the meaning of the algorithm. On the other hand, object-oriented approach is nice to read, but may come with an inherent performance penalty. These lectures aim to present he basics of the Expression Template (ET) idiom which allows us to keep the object-oriented approach without sacrificing performance. We will in particular show to to enhance ET to include SIMD vectorization. We will then introduce techniques for abstracting iteration, and introduce thread-level parallelism for use in heavy data-centric loads. We will show to to apply these methods i...

  17. Templated growth of graphenic materials.

    Science.gov (United States)

    Nicholas, Nolan W; Connors, L Matthew; Ding, Feng; Yakobson, Boris I; Schmidt, Howard K; Hauge, Robert H

    2009-06-17

    A novel strategy is proposed for the topologically controlled synthesis of extended graphenic sheets by additively reacting carbon into a pre-existing graphene sheet which is on top of a templating substrate. This concept is implemented and demonstrated using chemical vapor deposition (CVD). Novel morphological features observed in this study suggest unusual aspects of the CVD growth process. CVD results demonstrate the basic soundness of the synthesis strategy but highlight the sensitivity of the process to certain types of disruption and the need for alternative forms of embodiment.

  18. A template for design personas

    DEFF Research Database (Denmark)

    Nielsen, Lene; Storgaard Nielsen, Kira; Stage, Jan

    2015-01-01

    The persona method is gaining widespread use and support. Many researchers have reported from single cases and from novel domains on how they have used the method. However, the way companies and design groups describe personas has not been the focus of attention. This paper analyses 47 descriptions...... from 13 companies and compares these to an analysis of recommendations from 11 templates from literature. Furthermore, 28 interviews with Danish practitioners with experience in using personas are analyzed for content on persona descriptions. The study finds that a Danish persona style has developed...

  19. Making Deformable Template Models Operational

    DEFF Research Database (Denmark)

    Fisker, Rune

    2000-01-01

    for estimation of the model parameters, which applies a combination of a maximum likelihood and minimum distance criterion. Another contribution is a very fast search based initialization algorithm using a filter interpretation of the likelihood model. These two methods can be applied to most deformable template...... models making a non-expert user able to use the model. A comparative study of a number of optimization algorithms is also reported. In addition a general polygon-based model, an ellipse model and a textile model are proposed and a number of applications have been solved. Finally the Grenander model...

  20. Cancer Clusters

    Science.gov (United States)

    ... Genetics Services Directory Cancer Prevention Overview Research Cancer Clusters On This Page What is a cancer cluster? ... the number of cancer cases in the suspected cluster Many reported clusters include too few cancer cases ...

  1. Hard template synthesis of metal nanowires

    Directory of Open Access Journals (Sweden)

    Go eKawamura

    2014-11-01

    Full Text Available Metal nanowires (NWs have attracted much attention because of their high electron conductivity, optical transmittance and tunable magnetic properties. Metal NWs have been synthesized using soft templates such as surface stabilizing molecules and polymers, and hard templates such as anodic aluminum oxide, mesoporous oxide, carbon nanotubes. NWs prepared from hard templates are composites of metals and the oxide/carbon matrix. Thus, selecting appropriate elements can simplify the production of composite devices. The resulting NWs are immobilized and spatially arranged, as dictated by the ordered porous structure of the template. This avoids the NWs from aggregating, which is common for NWs prepared with soft templates in solution. Herein, the hard template synthesis of metal NWs is reviewed, and the resulting structures, properties and potential applications are discussed.

  2. Block copolymer templated synthesis of PtIr bimetallic nanocatalysts for the formic acid oxidation reaction

    Energy Technology Data Exchange (ETDEWEB)

    Taylor, Audrey K. [Department of Chemistry; Western Washington University; Bellingham; USA; Perez, Diane S. [Department of Chemistry; Western Washington University; Bellingham; USA; Zhang, Xin [Department of Chemistry and 4D LABS; Simon Fraser University; Burnaby; Canada; Pilapil, Brandy K. [Department of Chemistry and 4D LABS; Simon Fraser University; Burnaby; Canada; Engelhard, Mark H. [Environmental Molecular Sciences Laboratory; Pacific Northwest National Laboratory; Richland; USA; Gates, Byron D. [Department of Chemistry and 4D LABS; Simon Fraser University; Burnaby; Canada; Rider, David A. [Department of Chemistry; Western Washington University; Bellingham; USA; Department of Engineering and Design

    2017-01-01

    Arrays of PtIr alloy nanoparticle (NP) clusters are synthesized from a method using block copolymer templates, which allows for relatively narrow NP diameter distributions (~4–13 nm) and uniform intercluster spacing (~60 or ~100 nm).

  3. Application of template matching for improving classification of urban railroad point clouds

    NARCIS (Netherlands)

    Arastounia, M.; Oude Elberink, S.J.

    2016-01-01

    This study develops an integrated data-driven and model-driven approach (template matching) that clusters the urban railroad point clouds into three classes of rail track, contact cable, and catenary cable. The employed dataset covers 630 m of the Dutch urban railroad corridors in which there are

  4. Template-Directed Olefin Cross Metathesis

    OpenAIRE

    Cantrill, Stuart J.; Grubbs, Robert H; Lanari, Daniela; Leung, Ken C.-F.; Nelson, Alshakim; Poulin-Kerstien, Katherine G.; Smidt, Sebastian P.; Stoddart, J. Fraser; Tirrell, David A.

    2005-01-01

    A template containing two secondary dialkylammonium ion recognition sites for encirclement by olefin-bearing dibenzo[24]crown-8 derivatives has been used to promote olefin cross metatheses with ruthenium-alkylidene catalysts. For monoolefin monomers, the rates of metatheses and yields of the dimers are both amplified in the presence of the template. Likewise, for a diolefin monomer, the yield of the dimer is enhanced in the presence of the template under conditions where higher oligomers are ...

  5. Vertical Carbon Nanotube Device in Nanoporous Templates

    Science.gov (United States)

    Maschmann, Matthew Ralph (Inventor); Fisher, Timothy Scott (Inventor); Sands, Timothy (Inventor); Bashir, Rashid (Inventor)

    2014-01-01

    A modified porous anodic alumina template (PAA) containing a thin CNT catalyst layer directly embedded into the pore walls. CNT synthesis using the template selectively catalyzes SWNTs and DWNTs from the embedded catalyst layer to the top PAA surface, creating a vertical CNT channel within the pores. Subsequent processing allows for easy contact metallization and adaptable functionalization of the CNTs and template for a myriad of applications.

  6. Templated Dry Printing of Conductive Metal Nanoparticles

    Science.gov (United States)

    Rolfe, David Alexander

    Printed electronics can lower the cost and increase the ubiquity of electrical components such as batteries, sensors, and telemetry systems. Unfortunately, the advance of printed electronics has been held back by the limited minimum resolution, aspect ratio, and feature fidelity of present printing techniques such as gravure, screen printing and inkjet printing. Templated dry printing offers a solution to these problems by patterning nanoparticle inks into templates before drying. This dissertation shows advancements in two varieties of templated dry nanoprinting. The first, advective micromolding in vapor-permeable templates (AMPT) is a microfluidic approach that uses evaporation-driven mold filling to create submicron features with a 1:1 aspect ratio. We will discuss submicron surface acoustic wave (SAW) resonators made through this process, and the refinement process in the template manufacturing process necessary to make these devices. We also present modeling techniques that can be applied to future AMPT templates. We conclude with a modified templated dry printing that improves throughput and isolated feature patterning by transferring dry-templated features with laser ablation. This method utilizes surface energy-defined templates to pattern features via doctor blade coating. Patterned and dried features can be transferred to a polymer substrate with an Nd:YAG MOPA fiber laser, and printed features can be smaller than the laser beam width.

  7. Influence of template fill in graphoepitaxy DSA

    Science.gov (United States)

    Doise, Jan; Bekaert, Joost; Chan, Boon Teik; Hong, SungEun; Lin, Guanyang; Gronheid, Roel

    2016-03-01

    Directed self-assembly (DSA) of block copolymers (BCP) is considered a promising patterning approach for the 7 nm node and beyond. Specifically, a grapho-epitaxy process using a cylindrical phase BCP may offer an efficient solution for patterning randomly distributed contact holes with sub-resolution pitches, such as found in via and cut mask levels. In any grapho-epitaxy process, the pattern density impacts the template fill (local BCP thickness inside the template) and may cause defects due to respectively over- or underfilling of the template. In order to tackle this issue thoroughly, the parameters that determine template fill and the influence of template fill on the resulting pattern should be investigated. In this work, using three process flow variations (with different template surface energy), template fill is experimentally characterized as a function of pattern density and film thickness. The impact of these parameters on template fill is highly dependent on the process flow, and thus pre-pattern surface energy. Template fill has a considerable effect on the pattern transfer of the DSA contact holes into the underlying layer. Higher fill levels give rise to smaller contact holes and worse critical dimension uniformity. These results are important towards DSA-aware design and show that fill is a crucial parameter in grapho-epitaxy DSA.

  8. Forensic medical examination of the corpse of General Władysław Sikorski, a putative victim of assassination in 1943.

    Science.gov (United States)

    Konopka, Tomasz; Gross, Adam; Woźniak, Krzysztof; Kłys, Małgorzata

    2010-10-10

    The Krakow Department of Forensic Medicine was granted a unique opportunity to examine the body of a historical figure, i.e. General Władysław Sikorski, the Prime Minister of the Polish government in exile, deceased in 1943. General Sikorski died in the crash of a Liberator aircraft at Gibraltar, and the British commission investigating the crash decided it had been an accident. In the past several decades, doubts have been repeatedly expressed as to the circumstances of the General's death and the theory of assassination has become very popular. On November 25, 2008, the General's corpse buried in the cathedral of the Royal Castle on Wawel Hill in Krakow was exhumed and the body was thoroughly examined. The examinations demonstrated numerous fractures of the cranium, spine and extremities, the character of which corresponded to effects of an air crash. Based on corpse examination alone it was impossible to establish whether the air crash had been an effect of sabotage or an ill-fated accident. Although no typical evidence of intravitality was found, such as bruises or fat embolisms, yet the character of some fractures suggested that they had been incurred intravitally. These were represented by a spiral fracture of the femoral bone shaft, a fracture of the sustentaculum tali of the calcaneal bone and fractures of the transverse processes of the lumbar vertebrae. Copyright © 2010 Elsevier Ireland Ltd. All rights reserved.

  9. Beyond The Anticipatory Corpse: Medicine, Power, and the Care of the Dying: A Theoretical and Methodological Intervention into the Sociology of Brain Implant Surgery.

    Science.gov (United States)

    Hancock, Black Hawk; Morrison, Daniel R

    2016-12-01

    Drawing on and extending the Foucaultian philosophical framework that Jeffrey Bishop develops in his masterful book, The Anticipatory Corpse: Medicine, Power, and the Care of the Dying, we undertake a sociological analysis of the neurological procedure-deep brain stimulation (DBS)-which implants electrodes in the brain, powered by a pacemaker-like device, for the treatment of movement disorders. Following Bishop's work, we carry out this analysis through a two-fold strategy. First, we examine how a multidisciplinary team evaluates candidates for this implant at a major medical center. We present excerpts from an ethnographic study of the "case conference" where disease entities are presented, contested, ratified, and made objects for intervention with this technology. The case conference becomes the key site in the transition from "person-with-illness" to "person-with-brain-implant" as a team of health professionals determines a plan of action by interpreting both statistical and "quality of life" data regarding their patients. Second, this article explores these decision-making processes through Bishop's conceptualization of evidence-based medicine, which relies on statistical approaches as the ultimate authority in knowledge production and medical decisions. We then reflect on Bishop's critique of the social sciences and the methodological, analytical, and substantive ramifications that The Anticipatory Corpse can offer future sociological work. © The Author 2016. Published by Oxford University Press, on behalf of the Journal of Medicine and Philosophy Inc. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  10. Comparison between the standard SPM2 template and Korean-standard template in FDG-PET

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Jung Hee; Lee, Byeong Il; Song, Ho Chun; Min, Jung Joon; Bom, Hee Seung [Chonnam National University Hospital, Gwangju (Korea, Republic of); Lee, Jae Sung [Seoul National University Hospital, Seoul (Korea, Republic of)

    2005-07-01

    The preprocessing step of statistical parametric mapping (SPM) requires the procedure of spatial normalization that consists of applying the nonlinear deformations needed to force every particular PET scan to match a reference template. The purpose of this study is to asses the statistic influence of using 2 different templates (the standard SPM2-PET template and Korean-standard PET template) in the normalization. We compared the regional metabolic patterns on 18F-FDG (fluorodeoxyglucose) images obtained from 4 patients with Alzheimers disease (AD) and 16 normal subjects. The statistical outcome of between- group comparison was analyzed with SPM2 and was applied into two levels of thresholds (an uncorrected P value of P <0.001, a corrected P value of P < 0.05). As a result, the most significant hypometabolic region was commonly found in the left temporal gyrus regardless of template type or thresholds. However, inconsistent results including different extent and the t-score statistics representing metabolic changes could be also observed between two templates. While the standard SPM2 template showed hypometabolic regions corresponding to Brodman area (BA) 7 and 9, Korean-standard template was not observed these regions. In addition, hypometabolic regions corresponding to BA 38 and 46 indicated not the standard SPM2 template but Korean-standard template. Statistic result showed that the standard SPM2 template effectively reflects the dorsal region of the brain while Korean-standard template is more sensitive to the medial region of the brain.

  11. Practical Biometric Authentication with Template Protection

    NARCIS (Netherlands)

    Tuyls, P.; Akkermans, A.H.M.; Kevenaar, T.A.M.; Schrijen, G.J.; Bazen, A.M.; Veldhuis, Raymond N.J.; Kanade, T.; Jain, A.K.; Ratha, N.K.

    We show the feasibility of template protecting biometric authentication systems. In particular, we apply template protection schemes to fingerprint data. Therefore we first make a fixed length representation of the fingerprint data by applying Gabor filtering. Next we introduce the reliable

  12. Screening for templates that promote crystallization

    NARCIS (Netherlands)

    Urbanus, J.; Roelands, C.P.M.; Horst, J.H. ter; Verdoes, D.; Jansens, P.J.

    2008-01-01

    In Situ Product Recovery (ISPR) applied in fermentation processes leads to improved yield and productivity of these processes. In principle, ISPR can be achieved using Template Induced Crystallization (TIC), which is one possible ISPR technique. With TIC, templates are added to the solution as a

  13. Surgical Templates for Dental Implant Positioning; Current ...

    African Journals Online (AJOL)

    applicability of surgical templates used in the placement of dental implants. KEYWORDS: Dental implants, surgical templates, surgical procedure, stent. Access this .... ended up with the identification of basic three‑fabrication design concepts; (1) ... surgical guide on mounted diagnostic models of patient's mouth. He also ...

  14. Template Assembly for Detailed Urban Reconstruction

    KAUST Repository

    Nan, Liangliang

    2015-05-04

    We propose a new framework to reconstruct building details by automatically assembling 3D templates on coarse textured building models. In a preprocessing step, we generate an initial coarse model to approximate a point cloud computed using Structure from Motion and Multi View Stereo, and we model a set of 3D templates of facade details. Next, we optimize the initial coarse model to enforce consistency between geometry and appearance (texture images). Then, building details are reconstructed by assembling templates on the textured faces of the coarse model. The 3D templates are automatically chosen and located by our optimization-based template assembly algorithm that balances image matching and structural regularity. In the results, we demonstrate how our framework can enrich the details of coarse models using various data sets.

  15. Novel functions for the RNA-binding protein ETR-1 in Caenorhabditis elegans reproduction and engulfment of germline apoptotic cell corpses.

    Science.gov (United States)

    Boateng, Ruby; Nguyen, Ken C Q; Hall, David H; Golden, Andy; Allen, Anna K

    2017-09-01

    RNA-binding proteins (RBPs) are essential regulators of gene expression that act through a variety of mechanisms to ensure the proper post-transcriptional regulation of their target RNAs. RBPs in multiple species have been identified as playing crucial roles during development and as having important functions in various adult organ systems, including the heart, nervous, muscle, and reproductive systems. ETR-1, a highly conserved ELAV-Type RNA-binding protein belonging to the CELF/Bruno protein family, has been previously reported to be involved in C. elegans muscle development. Animals depleted of ETR-1 have been previously characterized as arresting at the two-fold stage of embryogenesis. In this study, we show that ETR-1 is expressed in the hermaphrodite somatic gonad and germ line, and that reduction of ETR-1 via RNA interference (RNAi) results in reduced hermaphrodite fecundity. Detailed characterization of this fertility defect indicates that ETR-1 is required in both the somatic tissue and the germ line to ensure wild-type reproductive levels. Additionally, the ability of ETR-1 depletion to suppress the published WEE-1.3-depletion infertility phenotype is dependent on ETR-1 being reduced in the soma. Within the germline of etr-1(RNAi) hermaphrodite animals, we observe a decrease in average oocyte size and an increase in the number of germline apoptotic cell corpses as evident by an increased number of CED-1::GFP and acridine orange positive apoptotic germ cells. Transmission Electron Microscopy (TEM) studies confirm the significant increase in apoptotic cells in ETR-1-depleted animals, and reveal a failure of the somatic gonadal sheath cells to properly engulf dying germ cells in etr-1(RNAi) animals. Through investigation of an established engulfment pathway in C. elegans, we demonstrate that co-depletion of CED-1 and ETR-1 suppresses both the reduced fecundity and the increase in the number of apoptotic cell corpses observed in etr-1(RNAi) animals. Combined

  16. Templated Growth of Magnetic Recording Media

    Science.gov (United States)

    Sundar, Vignesh

    Current and potential next-generation magnetic recording technologies are based on the writing and reading of bits on a magnetic thin film with a granular microstructure, with grains of the magnetic material surrounded by an amorphous segregant. In order to realize the highest achievable data storage capabilities, there is a need for better control of the magnetic media microstructure, particularly in terms of minimizing grain size and grain boundary thickness distributions. In this work, a guided magnetic media growth is attempted by creating a pre-fabricated template with a specific material and morphology. The template is designed in such a way that, when magnetic media consisting of the magnetic alloy and segregant are sputtered, the sites on the template result in a controlled two-phase growth of magnetic media. The template is fabricated using self-assembling block copolymers, which can be used to fabricate nanostructures with a regular hexagonal lattice of spheres of one block in the other's matrix. These are then used as etch-masks to fabricate the template. In this thesis, we describe the approach used to fabricate these templates and demonstrate the two-phase growth of magnetic recording media. In such an approach, the magnetic grain size is defined by the uniform pitch of the block copolymer pattern, resulting in a uniform microstructure with much better grain size distribution than can be obtained with conventional un-templated media growth. The templated growth technique is also a suitable additive technique for the fabrication of Bit Patterned Media, another potential next-generation technology wherein the magnetic bits are isolated patterned islands. Combining nanoimprint lithography with templated growth, we can generate a long range spatially ordered array of magnetic islands with no etching of the magnetic material.

  17. The Criminal Corpse, Anatomists and the Criminal Law: Parliamentary Attempts to Extend the Dissection of Offenders in Late Eighteenth-Century England.

    Science.gov (United States)

    Ward, Richard M

    2015-01-01

    In the later eighteenth century two schemes were introduced in Parliament for extending the practice of handing over the bodies of executed offenders to anatomists for dissection. Both measures were motivated by the needs of anatomy - including the improvement of surgical skill, the development of medical teaching in the provinces, and for conducting public anatomical demonstrations. Yet both failed to pass into law due to concerns about the possibly damaging effects in terms of criminal justice. Through a detailed analysis of the origins and progress of these two parliamentary measures - a moment when the competing claims of anatomy and criminal justice vied for supremacy over the criminal corpse - the following article sheds light on judicial attitudes to dissection as a method of punishment and adds to our understanding of why the dread of dissection would come to fall upon the dead poor (rather than executed offenders) in the nineteenth century.

  18. The Criminal Corpse, Anatomists and the Criminal Law: Parliamentary Attempts to Extend the Dissection of Offenders in Late Eighteenth-Century England

    Science.gov (United States)

    Ward, Richard M.

    2015-01-01

    In the later eighteenth century two schemes were introduced in Parliament for extending the practice of handing over the bodies of executed offenders to anatomists for dissection. Both measures were motivated by the needs of anatomy — including the improvement of surgical skill, the development of medical teaching in the provinces, and for conducting public anatomical demonstrations. Yet both failed to pass into law due to concerns about the possibly damaging effects in terms of criminal justice. Through a detailed analysis of the origins and progress of these two parliamentary measures — a moment when the competing claims of anatomy and criminal justice vied for supremacy over the criminal corpse — the following article sheds light on judicial attitudes to dissection as a method of punishment and adds to our understanding of why the dread of dissection would come to fall upon the dead poor (rather than executed offenders) in the nineteenth century. PMID:25821241

  19. Templated Native Silk Smectic Gels

    Science.gov (United States)

    Jin, Hyoung-Joon (Inventor); Park, Jae-Hyung (Inventor); Valluzzi, Regina (Inventor)

    2016-01-01

    One aspect of the present invention relates to a method of preparing a fibrous protein smectic hydrogel by way of a solvent templating process, comprising the steps of pouring an aqueous fibrous protein solution into a container comprising a solvent that is not miscible with water; sealing the container and allowing it to age at about room temperature; and collecting the resulting fibrous protein smectic hydrogel and allowing it to dry. Another aspect of the present invention relates to a method of obtaining predominantly one enantiomer from a racemic mixture, comprising the steps of pouring an aqueous fibrous protein solution into a container comprising a solvent that is not miscible with water; sealing the container and allowing it to age at about room temperature; allowing the enantiomers of racemic mixture to diffuse selectively into the smectic hydrogel in solution; removing the smectic hydrogel from the solution; rinsing predominantly one enantiomer from the surface of the smectic hydrogel; and extracting predominantly one enantiomer from the interior of the smectic hydrogel. The present invention also relates to a smectic hydrogel prepared according to an aforementioned method.

  20. Nanowires and nanostructures fabrication using template methods

    DEFF Research Database (Denmark)

    Mátéfi-Tempfli, Stefan; Mátéfi-Tempfli, M.; Vlad, A.

    2009-01-01

    One of the great challenges of today is to find reliable techniques for the fabrication of nanomaterials and nanostructures. Methods based on template synthesis and on self organization are the most promising due to their easiness and low cost. This paper focuses on the electrochemical synthesis ...... of nanowires and nanostructures using nanoporous host materials such as supported anodic aluminum considering it as a key template for nanowires based devices. New ways are opened for applications by combining such template synthesis methods with nanolithographic techniques....

  1. Conceptual Design and Simulation of a Semi-Automatic Cell for the Washing and Preparation of a Corpse Prior to an Islamic Burial

    Directory of Open Access Journals (Sweden)

    A. Meghdari

    2012-07-01

    Full Text Available Washing the corpse and dressing the body prior to burial is an act of love and necessity in many religions. Applying robotics and automation technologies for the washing and preparation of a deceased Muslim in accordance with the Islamic Shari'at laws has been the challenging foundation of this research. With an increasing annual population growth resulting in an increase in the number of deaths (historically and/or immediately after a national disaster, automating part of this procedure to increase the speed of operation, reducing the health risks to the personnel of washing rooms “Ghassalkhaneh” at the cemeteries and enhancing their quality of life have been the primary objectives of this project. We have named and patented this semi-automated corpse preparation machine as the “PaakShooy” or “پاک شوی” in Persian (Farsi which means purifying the deceased. The whole process is composed of three operational units lined up in a series; the automatic washing chamber, drying cell and the semi-automatic shrouding table. This paper covers an introductory concept of the subject in Islam, a conceptual design of various machines and mechanisms to automate the important tasks in accordance with Islamic laws, and the final detailed design, graphic simulation and animation of the PaakShooy machine. In doing so, consultation with Islamic scholars has been a priority from the beginning of the project to the end and a few Fatwa have been issued by some high ranking Ayatollahs in support of the project. With a few modifications, the semi-automated PaakShooy machine may now be updated to conform to other religions/customs.

  2. Seasonal blowfly distribution and abundance in fragmented landscapes. Is it useful in forensic inference about where a corpse has been decaying?

    Directory of Open Access Journals (Sweden)

    Jabi Zabala

    Full Text Available Blowflies are insects of forensic interest as they may indicate characteristics of the environment where a body has been laying prior to the discovery. In order to estimate changes in community related to landscape and to assess if blowfly species can be used as indicators of the landscape where a corpse has been decaying, we studied the blowfly community and how it is affected by landscape in a 7,000 km2 region during a whole year. Using baited traps deployed monthly we collected 28,507 individuals of 10 calliphorid species, 7 of them well represented and distributed in the study area. Multiple Analysis of Variance found changes in abundance between seasons in the 7 analyzed species, and changes related to land use in 4 of them (Calliphora vomitoria, Lucilia ampullacea, L. caesar and L. illustris. Generalised Linear Model analyses of abundance of these species compared with landscape descriptors at different scales found only a clear significant relationship between summer abundance of C. vomitoria and distance to urban areas and degree of urbanisation. This relationship explained more deviance when considering the landscape composition at larger geographical scales (up to 2,500 m around sampling site. For the other species, no clear relationship between land uses and abundance was found, and therefore observed changes in their abundance patterns could be the result of other variables, probably small changes in temperature. Our results suggest that blowfly community composition cannot be used to infer in what kind of landscape a corpse has decayed, at least in highly fragmented habitats, the only exception being the summer abundance of C. vomitoria.

  3. Templated and template-free fabrication strategies for zero-dimensional hollow MOF superstructures.

    Science.gov (United States)

    Kim, Hyehyun; Lah, Myoung Soo

    2017-05-16

    Various fabrication strategies for hollow metal-organic framework (MOF) superstructures are reviewed and classified using various types of external templates and their properties. Hollow MOF superstructures have also been prepared without external templates, wherein unstable intermediates obtained during reactions convert to the final hollow MOF superstructures. Many hollow MOF superstructures have been fabricated using hard templates. After the core-shell core@MOF structure was prepared using a hard template, the core was selectively etched to generate a hollow MOF superstructure. Another approach for generating hollow superstructures is to use a solid reactant as a sacrificial template; this method requires no additional etching process. Soft templates such as discontinuous liquid/emulsion droplets and gas bubbles in a continuous soft phase have also been employed to prepare hollow MOF superstructures.

  4. Fast Legendre moment computation for template matching

    Science.gov (United States)

    Li, Bing C.

    2017-05-01

    Normalized cross correlation (NCC) based template matching is insensitive to intensity changes and it has many applications in image processing, object detection, video tracking and pattern recognition. However, normalized cross correlation implementation is computationally expensive since it involves both correlation computation and normalization implementation. In this paper, we propose Legendre moment approach for fast normalized cross correlation implementation and show that the computational cost of this proposed approach is independent of template mask sizes which is significantly faster than traditional mask size dependent approaches, especially for large mask templates. Legendre polynomials have been widely used in solving Laplace equation in electrodynamics in spherical coordinate systems, and solving Schrodinger equation in quantum mechanics. In this paper, we extend Legendre polynomials from physics to computer vision and pattern recognition fields, and demonstrate that Legendre polynomials can help to reduce the computational cost of NCC based template matching significantly.

  5. Template for safety reports with descriptive example

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1995-12-01

    This report provides a template for future safety reports on long-term safety in support of important decisions and permit applications in connection with the construction of a deep repository system. The template aims at providing a uniform structure for describing long-term safety, after the repository has been closed and sealed. The availability of such a structure will simplify both preparation and review of the safety reports, and make it possible to follow how safety assessments are influenced by the progressively more detailed body of data that emerges. A separate section containing `descriptive examples` has been appended to the template. This section illustrates what the different chapters of the template should contain. 279 refs.

  6. Template-based prediction of protein function.

    Science.gov (United States)

    Petrey, Donald; Chen, T Scott; Deng, Lei; Garzon, Jose Ignacio; Hwang, Howook; Lasso, Gorka; Lee, Hunjoong; Silkov, Antonina; Honig, Barry

    2015-06-01

    We discuss recent approaches for structure-based protein function annotation. We focus on template-based methods where the function of a query protein is deduced from that of a template for which both the structure and function are known. We describe the different ways of identifying a template. These are typically based on sequence analysis but new methods based on purely structural similarity are also being developed that allow function annotation based on structural relationships that cannot be recognized by sequence. The growing number of available structures of known function, improved homology modeling techniques and new developments in the use of structure allow template-based methods to be applied on a proteome-wide scale and in many different biological contexts. This progress significantly expands the range of applicability of structural information in function annotation to a level that previously was only achievable by sequence comparison. Copyright © 2015 Elsevier Ltd. All rights reserved.

  7. Template analysis for the MAGIC telescopes

    Energy Technology Data Exchange (ETDEWEB)

    Menzel, Uta [Max-Planck-Institut fuer Physik, Muenchen (Germany); Collaboration: MAGIC-Collaboration

    2016-07-01

    The MAGIC telescopes are two 17-m-diameter Imaging Air Cherenkov Telescopes located on the Canary island of La Palma. They record the Cherenkov light from air showers induced by very high energy photons. The current data analysis uses a parametrization of the two shower images (including Hillas parameters) to determine the characteristics of the primary particle. I am implementing an advanced analysis method that compares shower images on a pixel basis with template images based on Monte Carlo simulations. To reduce the simulation effort the templates contain only pure shower images that are convolved with the telescope response later in the analysis. The primary particle parameters are reconstructed by maximizing the likelihood of the template. By using all the information available in the shower images, the performance of MAGIC is expected to improve. In this presentation I will explain the general idea of a template-based analysis and show the first results of the implementation.

  8. Template Approach for Adaptive Learning Strategies

    NARCIS (Netherlands)

    Abbing, Jana; Koidl, Kevin

    2006-01-01

    Please, cite this publication as: Abbing, J. & Koidl, K. (2006). Template Approach for Adaptive Learning Strategies. Proceedings of Adaptive Hypermedia. June, Dublin, Ireland. Retrieved June 30th, 2006, from http://dspace.learningnetworks.org

  9. Star clusters

    NARCIS (Netherlands)

    Gieles, M.

    2006-01-01

    Star clusters are observed in almost every galaxy. In this thesis we address several fundamental problems concerning the formation, evolution and disruption of star clusters. From observations of (young) star clusters in the interacting galaxy M51, we found that clusters are formed in complexes of

  10. In search of the visual pigment template

    OpenAIRE

    Govardovskii, V.I.; Fyhrquist, N; Reuter, T; Kuzmin, D.G.; Donner, K

    2000-01-01

    Absorbance spectra were recorded by microspectrophotometry from 39 different rod and cone types representing amphibians, reptiles, and fishes, with A1- or A2-based visual pigments and [lambda]max ranging from 357 to 620 nm. The purpose was to investigate accuracy limits of putative universal templates for visual pigment absorbance spectra, and if possible to amend the templates to overcome the limitations. It was found that (1) the absorbance spectrum of frog rhodopsin extract very precisely ...

  11. Multi-template polymerase chain reaction

    Directory of Open Access Journals (Sweden)

    Elena Kalle

    2014-12-01

    Full Text Available PCR is a formidable and potent technology that serves as an indispensable tool in a wide range of biological disciplines. However, due to the ease of use and often lack of rigorous standards many PCR applications can lead to highly variable, inaccurate, and ultimately meaningless results. Thus, rigorous method validation must precede its broad adoption to any new application. Multi-template samples possess particular features, which make their PCR analysis prone to artifacts and biases: multiple homologous templates present in copy numbers that vary within several orders of magnitude. Such conditions are a breeding ground for chimeras and heteroduplexes. Differences in template amplification efficiencies and template competition for reaction compounds undermine correct preservation of the original template ratio. In addition, the presence of inhibitors aggravates all of the above-mentioned problems. Inhibitors might also have ambivalent effects on the different templates within the same sample. Yet, no standard approaches exist for monitoring inhibitory effects in multitemplate PCR, which is crucial for establishing compatibility between samples.

  12. A Generic Stochastic Template Bank Placement Algorithm

    Science.gov (United States)

    Frei, Melissa; Fotopoulos, N.; Priviteria, S.

    2012-01-01

    Black hole binary (BBH) systems represent strong candidates for gravitational wave (GW) detection by GW detectors LIGO and Virgo. BBH searches are template based searches where the templates describe potential GWs. Most BBH sources are spinning strongly enough to affect orbital dynamics though past searches have all been for non-spinning systems. Neglecting spin results in a significant decrease in a BBH search's sensitivity to spinning systems while the inclusion of leading order, single parameter spin corrections regain much of that sensitivity. BBH templates in past searches were chosen so that the overlap between neighboring templates was 97%. The optimal placement of non-spinning, inspiral templates is known but does not work for systems described by more parameters. For spinning systems, the placement metric is not known and stochastic methods like the one described in this poster are necessary. The method described here is based on previous stochastic work. It represents a fast, flexible, open-source tool using publicly available LIGO Algorithms Library (LAL) to generate stochastic banks for any template family no matter the number of parameters used to describe it. The method shows more efficient coverage of the parameter space of interest than a discrete stacking of a two-dimensional bank in a third direction.

  13. Weighted Clustering

    DEFF Research Database (Denmark)

    Ackerman, Margareta; Ben-David, Shai; Branzei, Simina

    2012-01-01

    We investigate a natural generalization of the classical clustering problem, considering clustering tasks in which different instances may have different weights.We conduct the first extensive theoretical analysis on the influence of weighted data on standard clustering algorithms in both...... the partitional and hierarchical settings, characterizing the conditions under which algorithms react to weights. Extending a recent framework for clustering algorithm selection, we propose intuitive properties that would allow users to choose between clustering algorithms in the weighted setting and classify...

  14. Genome-wide analysis of single non-templated nucleotides in plant endogenous siRNAs and miRNAs.

    Science.gov (United States)

    Wang, Feng; Johnson, Nathan R; Coruh, Ceyda; Axtell, Michael J

    2016-09-06

    Plant small RNAs are subject to various modifications. Previous reports revealed widespread 3' modifications (truncations and non-templated tailing) of plant miRNAs when the 2'-O-methyltransferase HEN1 is absent. However, non-templated nucleotides in plant heterochromatic siRNAs have not been deeply studied, especially in wild-type plants. We systematically studied non-templated nucleotide patterns in plant small RNAs by analyzing small RNA sequencing libraries from Arabidopsis, tomato, Medicago, rice, maize and Physcomitrella Elevated rates of non-templated nucleotides were observed at the 3' ends of both miRNAs and endogenous siRNAs from wild-type specimens of all species. 'Off-sized' small RNAs, such as 25 and 23 nt siRNAs arising from loci dominated by 24 nt siRNAs, often had very high rates of 3'-non-templated nucleotides. The same pattern was observed in all species that we studied. Further analysis of 24 nt siRNA clusters in Arabidopsis revealed distinct patterns of 3'-non-templated nucleotides of 23 nt siRNAs arising from heterochromatic siRNA loci. This pattern of non-templated 3' nucleotides on 23 nt siRNAs is not affected by loss of known small RNA 3'-end modifying enzymes, and may result from modifications added to longer heterochromatic siRNA precursors. © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

  15. US Federal LCA Commons Life Cycle Inventory Unit Process Template

    Science.gov (United States)

    The US Federal LCA Commons Life Cycle Inventory Unit Process Template is a multi-sheet Excel template for life cycle inventory data, metadata and other documentation. The template comes as a package that consistent of three parts: (1) the main template itself for life cycle inven...

  16. Supramolecular ssDNA templated porphyrin and metalloporphyrin nanoassemblies with tunable helicity.

    Science.gov (United States)

    Sargsyan, Gevorg; Leonard, Brian M; Kubelka, Jan; Balaz, Milan

    2014-02-10

    Free-base and nickel porphyrin-diaminopurine conjugates were formed by hydrogen-bond directed assembly on single-stranded oligothymidine templates of different lengths into helical multiporphyrin nanoassemblies with highly modular structural and chiroptical properties. Large red-shifts of the Soret band in the UV/Vis spectroscopy confirmed strong electronic coupling among assembled porphyrin-diaminopurine units. Slow annealing rates yielded preferentially right-handed nanostructures, whereas fast annealing yielded left-handed nanostructures. Time-dependent DFT simulations of UV/Vis and CD spectra for model porphyrin clusters templated on the canonical B-DNA and its enantiomeric form, were employed to confirm the origin of observed chiroptical properties and to assign the helicity of porphyrin nanoassemblies. Molar CD and CD anisotropy g factors of dialyzed templated porphyrin nanoassemblies showed very high chiroptical anisotropy. The DNA-templated porphyrin nanoassemblies displayed high thermal and pH stability. The structure and handedness of all assemblies was preserved at temperatures up to +85 °C and pH between 3 and 12. High-resolution transition electron microscopy confirmed formation of DNA-templated nickel(II) porphyrin nanoassemblies and their self-assembly into helical fibrils with micrometer lengths. Copyright © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  17. Cluster management.

    Science.gov (United States)

    Katz, R

    1992-11-01

    Cluster management is a management model that fosters decentralization of management, develops leadership potential of staff, and creates ownership of unit-based goals. Unlike shared governance models, there is no formal structure created by committees and it is less threatening for managers. There are two parts to the cluster management model. One is the formation of cluster groups, consisting of all staff and facilitated by a cluster leader. The cluster groups function for communication and problem-solving. The second part of the cluster management model is the creation of task forces. These task forces are designed to work on short-term goals, usually in response to solving one of the unit's goals. Sometimes the task forces are used for quality improvement or system problems. Clusters are groups of not more than five or six staff members, facilitated by a cluster leader. A cluster is made up of individuals who work the same shift. For example, people with job titles who work days would be in a cluster. There would be registered nurses, licensed practical nurses, nursing assistants, and unit clerks in the cluster. The cluster leader is chosen by the manager based on certain criteria and is trained for this specialized role. The concept of cluster management, criteria for choosing leaders, training for leaders, using cluster groups to solve quality improvement issues, and the learning process necessary for manager support are described.

  18. Monosaccharide templates for de novo designed 4-alpha-helix bundle proteins: template effects in carboproteins

    DEFF Research Database (Denmark)

    Brask, Jesper; Dideriksen, J.M.; Nielsen, John

    2003-01-01

    Da 4-alpha-helix bundles by oxime ligation of tetra-aminooxyacetyl functionalized D-galacto-, D-gluco-, and D-altropyranoside templates with an amphiphilic C- terminal hexadecapeptide aldehyde sequence. CD spectroscopy indicated that the choice of template has an effect on the overall structure...

  19. Conversion of Radiology Reporting Templates to the MRRT Standard.

    Science.gov (United States)

    Kahn, Charles E; Genereaux, Brad; Langlotz, Curtis P

    2015-10-01

    In 2013, the Integrating the Healthcare Enterprise (IHE) Radiology workgroup developed the Management of Radiology Report Templates (MRRT) profile, which defines both the format of radiology reporting templates using an extension of Hypertext Markup Language version 5 (HTML5), and the transportation mechanism to query, retrieve, and store these templates. Of 200 English-language report templates published by the Radiological Society of North America (RSNA), initially encoded as text and in an XML schema language, 168 have been converted successfully into MRRT using a combination of automated processes and manual editing; conversion of the remaining 32 templates is in progress. The automated conversion process applied Extensible Stylesheet Language Transformation (XSLT) scripts, an XML parsing engine, and a Java servlet. The templates were validated for proper HTML5 and MRRT syntax using web-based services. The MRRT templates allow radiologists to share best-practice templates across organizations and have been uploaded to the template library to supersede the prior XML-format templates. By using MRRT transactions and MRRT-format templates, radiologists will be able to directly import and apply templates from the RSNA Report Template Library in their own MRRT-compatible vendor systems. The availability of MRRT-format reporting templates will stimulate adoption of the MRRT standard and is expected to advance the sharing and use of templates to improve the quality of radiology reports.

  20. In search of the song template.

    Science.gov (United States)

    Adret, Patrice

    2004-06-01

    The auditory template theory-the conversion of memorized song to produced song using feedback as an error-correction mechanism-is central to neurobiological studies of birdsong learning. The essence of the theory is the construction of a complex sound replica based on a set of both genetic and environmental instructions. These premises, as yet unchallenged, have stimulated much research on the process of vocal imitation. Two somewhat distinct, but closely related streams of research have emerged. One seeks to determine the neural mechanisms that underlie the formation, storage, and retrieval of vocal memories as a consequence of experience during a sensitive phase-the template concept in its purest form. The other aims at establishing an explanatory basis for genetically based species differences in auditory responsiveness; here, the prime focus is on innately specified templates that guide learning preferences in young, naïve birds. The chapter begins with an historical overview of conceptual issues. Then recent progress in the attempt to characterize template properties is reviewed, focusing on selected studies of sparrows, nightingales, and zebra finches. The chapter concludes with a discussion of research strategy and tactics, including suggestions for criteria that must be met in identifying neural substrates for template specification and localization. The chapter is intended to provide a conceptual framework for further progress in this critical area.

  1. Cluster Headache

    Science.gov (United States)

    ... re at risk of cluster headache. A family history. Having a parent or sibling who has had cluster headache might increase your risk. By Mayo Clinic Staff . Mayo Clinic Footer Legal Conditions and Terms ...

  2. Cluster Headache

    OpenAIRE

    Bergseng, Marta Næss

    1985-01-01

    Cluster headache is the most severe primary headache with recurrent pain attacks described as worse than giving birth. The aim of this paper was to make an overview of current knowledge on cluster headache with a focus on pathophysiology and treatment. This paper presents hypotheses of cluster headache pathophysiology, current treatment options and possible future therapy approaches. For years, the hypothalamus was regarded as the key structure in cluster headache, but is now thought to be pa...

  3. Meaningful Clusters

    Energy Technology Data Exchange (ETDEWEB)

    Sanfilippo, Antonio P.; Calapristi, Augustin J.; Crow, Vernon L.; Hetzler, Elizabeth G.; Turner, Alan E.

    2004-05-26

    We present an approach to the disambiguation of cluster labels that capitalizes on the notion of semantic similarity to assign WordNet senses to cluster labels. The approach provides interesting insights on how document clustering can provide the basis for developing a novel approach to word sense disambiguation.

  4. Learning probabilistic document template models via interaction

    Science.gov (United States)

    Ahmadullin, Ildus; Damera-Venkata, Niranjan

    2013-03-01

    Document aesthetics measures are key to automated document composition. Recently we presented a probabilistic document model (PDM) which is a micro-model for document aesthetics based on a probabilistic modeling of designer choice in document design. The PDM model comes with efficient layout synthesis algorithms once the aesthetic model is defined. A key element of this approach is an aesthetic prior on the parameters of a template encoding aesthetic preferences for template parameters. Parameters of the prior were required to be chosen empirically by designers. In this work we show how probabilistic template models (and hence the PDM cost function) can be learnt directly by observing a designer making design choices in composing sample documents. From such training data our learning approach can learn a quality measure that can mimic some of the design tradeoffs a designer makes in practice.

  5. A Hybrid Approach to Protect Palmprint Templates

    Directory of Open Access Journals (Sweden)

    Hailun Liu

    2014-01-01

    Full Text Available Biometric template protection is indispensable to protect personal privacy in large-scale deployment of biometric systems. Accuracy, changeability, and security are three critical requirements for template protection algorithms. However, existing template protection algorithms cannot satisfy all these requirements well. In this paper, we propose a hybrid approach that combines random projection and fuzzy vault to improve the performances at these three points. Heterogeneous space is designed for combining random projection and fuzzy vault properly in the hybrid scheme. New chaff point generation method is also proposed to enhance the security of the heterogeneous vault. Theoretical analyses of proposed hybrid approach in terms of accuracy, changeability, and security are given in this paper. Palmprint database based experimental results well support the theoretical analyses and demonstrate the effectiveness of proposed hybrid approach.

  6. Three-particle templates for boosted Higgs

    CERN Document Server

    Almeida, Leandro G; Juknevich, José; Lee, Seung J; Perez, Gilad; Sterman, George

    2012-01-01

    We explore the ability of three-particle templates to distinguish color neutral objects from QCD background. This method is particularly useful to identify the standard model Higgs, as well as other massive neutral particles. Simple cut-based analysis in the overlap distributions of the signal and background is shown to provide a significant rejection power. By combining with other discriminating variables, such as planar flow, and several variables that depend on the partonic template, three-particle templates are used to characterize the influence of gluon emission and color flow in collider events. The performance of the method is discussed for the case of a highly boosted Higgs in association with a leptonically-decaying W boson.

  7. Polymer templated nickel cobaltate for energy storage★

    Directory of Open Access Journals (Sweden)

    Albohani Shaymaa

    2017-01-01

    Full Text Available In order to take advantage of the increasing sophistication of technology for harnessing renewable energy resources, serious attention must be paid to how to store and re-access this energy. Electrochemical storage, in the guise of batteries, supercapacitors and pseudocapacitors, has attracted much attention as a viable option for enhanced energy storage applications. But in order for these technologies to be implemented successfully we need to find materials that perform better and are relatively easy to synthesise. Bimetallic transition metal oxides are materials that are readily synthesised and may be multifunctional, i.e. have a role at the electrochemical atomic level as well as the device level. In order for these materials to work efficiently in new generation systems based on sodium and lithium they also need to be mesoporous. This can be achieved by trying to find synthetic techniques that produce specific, highly regulated nanostructures or by adding a ‘templating’ agent during the bulk synthesis step. We have investigated the simple hydrothermal preparation of a number of nickel cobaltate (NiCo2O4 materials using polymer templates, eggshell membrane (ESM and poly methyl methacrylate (PMMA, as potential electrode materials for supercapacitors. The ESM was expected to act as a fibrous, random polymeric template while the PMMA should produce a much more ordered material. Electrochemical testing showed that the different templates have led to changes in material morphology and these have resulted in a difference in electrochemical properties. Templated materials increased specific capacitance compared to non-templated and the choice of template could influence the capacitance by as much as 30%.

  8. 2D vector-cyclic deformable templates

    DEFF Research Database (Denmark)

    Schultz, Nette; Conradsen, Knut

    1998-01-01

    matrices applied to the vector cycle. An approximation in the parameter distribution is introduced. The main advantage by using the deformable template model is the ability to simulate a wide range of objects trained by e.g. their biological variations, and thereby improve restoration, segmentation...... and probabillity measurement. The case study concerns estimation of meat percent in pork carcasses. Given two cross-sectional images - one at the front and one near the ham of the carcass - the areas of lean and fat and a muscle in the lean area are measured automatically by the deformable templates....

  9. Preparation of porous lanthanum phosphate with templates

    Energy Technology Data Exchange (ETDEWEB)

    Onoda, Hiroaki, E-mail: onoda@kpu.ac.jp [Department of Informatics and Environmental Sciences, Faculty of Life and Environmental Sciences, Kyoto Prefectural University, 1-5, Shimogamo Nakaragi-cyo, Sakyo-ku, Kyoto 606-8522 (Japan); Ishima, Yuya [Department of Applied Chemistry, Faculty of Life Sciences, Ritsumeikan University, 1-1-1, Nojihigashi, Kusatsu, Shiga 525-8577 (Japan); Takenaka, Atsushi [Department of Materials Science, Yonago National College of Technology, 4448, Hikona-cho, Yonago, Tottori 683-8502 (Japan); Tanaka, Isao [Department of Materials Science and Engineering, Faculty of Engineering, Kyoto University, Yoshida-Honmachi, Sakyo-ku, Kyoto 606-8501 (Japan)

    2009-08-05

    Malonic acid, propionic acid, glycine, n-butylamine, and urea were added to the preparation of lanthanum phosphate from lanthanum nitrate and phosphoric acid solutions. All additives were taken into lanthanum phosphate particles. The additives that have a basic site were easy to contain in precipitates. The addition of templates improved the specific surface area of lanthanum phosphate. The amount of pore, with radius smaller than 4 nm, increased with the addition of templates. The remained additives had influence on the acidic properties of lanthanum phosphate.

  10. Affordance Templates for Shared Robot Control

    Science.gov (United States)

    Hart, Stephen; Dinh, Paul; Hambuchen, Kim

    2014-01-01

    This paper introduces the Affordance Template framework used to supervise task behaviors on the NASA-JSC Valkyrie robot at the 2013 DARPA Robotics Challenge (DRC) Trials. This framework provides graphical interfaces to human supervisors that are adjustable based on the run-time environmental context (e.g., size, location, and shape of objects that the robot must interact with, etc.). Additional improvements, described below, inject degrees of autonomy into instantiations of affordance templates at run-time in order to enable efficient human supervision of the robot for accomplishing tasks.

  11. Introduction to ASPNET 4 AJAX Client Templates

    CERN Document Server

    Shoemaker, Craig

    2010-01-01

    This Wrox Blox will teach you how to create and customize ASP.NET 4 AJAX Preview 4 Client Templates. The author shows you how to use declarative as well as imperative data-binding techniques to address the simple to advanced UI requirements. He also covers how the observer pattern is fully implemented in ASP.NET 4 AJAX and, when used in conjunction with the Client Template markup extensions, provides a developer experience much like XAML-based applications like WPF and Silverlight. This Wrox Blox walks you through how to implement examples that fetch data from ASP.NET Web Forms using Page Meth

  12. Controlling Nanostructures by Templated Templates: Inheriting Molecular Orientation in Binary Heterostructures.

    Science.gov (United States)

    Breuer, Tobias; Witte, Gregor

    2015-09-16

    Precise preparation strategies are required to fabricate molecular nanostructures of specific arrangement. In bottom-up approaches, where nanostructures are gradually formed by piecing together individual parts to the final structure, the self-ordering mechanisms of the involved structures are utilized. In order to achieve the desired structures regarding morphology, grain size, and orientation of the individual moieties, templates can be applied, which influence the formation process of subsequent structures. However, this strategy is of limited use for complex architectures because the templates only influence the structure formation at the interface between the template and the first compound. Here, we discuss the implementation of so-called templated templates and analyze to what extent orientations of the initial layers are inherited in the top layers of another compound to enable structural control in binary heterostructures. For that purpose, we prepared crystalline templates of the organic semiconductors pentacene and perfluoropentacene in different exclusive orientations. We observe that for templates of both individual materials the molecular orientation is inherited in the top layers of the respective counterpart. This behavior is also observed for various other molecules, indicating the robustness of this approach.

  13. About the Clusters Program

    Science.gov (United States)

    The Environmental Technology Innovation Clusters Program advises cluster organizations, encourages collaboration between clusters, tracks U.S. environmental technology clusters, and connects EPA programs to cluster needs.

  14. The biogeochemical cycle of the adsorbed template. II - Selective adsorption of mononucleotides on adsorbed polynucleotide templates

    Science.gov (United States)

    Lazard, Daniel; Lahav, Noam; Orenberg, James B.

    1988-01-01

    Experimental results are presented for the verification of the specific interaction step of the 'adsorbed template' biogeochemical cycle, a simple model for a primitive prebiotic replication system. The experimental system consisted of gypsum as the mineral to which an oligonucleotide template attaches (Poly-C or Poly-U) and (5-prime)-AMP, (5-prime)-GMP, (5-prime)-CMP and (5-prime)-UMP as the interacting biomonomers. When Poly-C or Poly-U were used as adsorbed templates, (5-prime)-GMP and (5-prime)-AMP, respectively, were observed to be the most strongly adsorbed species.

  15. Triggered Templated Assembly of Protein Polymersomes

    NARCIS (Netherlands)

    Li, F.; Wolf, de F.A.; Marcelis, A.T.M.; Sudhölter, E.J.R.; Stuart, M.A.C.; Leermakers, F.A.M.

    2010-01-01

    Trigger the block: Stable biocompatible protein polymersomes can be generated by a triggered templated self-assembly route (see picture). Pluronic L121 vesicles (red core with blue corona) take up a biosynthetic triblock copolymer CSXSXC into their unilamellar shell. In response to changes in pH

  16. Template Based Low Data Rate Speech Encoder

    Science.gov (United States)

    1993-09-30

    95 with unquantized parameters. 9" Frame size 20 ms is preferred Excelent (Our choice) 95 "•. FrmeSietme Fig. 2 - Frame size vs. spech ...synthesized from the filter coefficients selected from the reference templates that are free from nonspeech sounds. We again use a similar technique but take it

  17. Organic or organometallic template mediated clay synthesis

    Energy Technology Data Exchange (ETDEWEB)

    Gregar, K.C.; Winans, R.E.; Botto, R.E.

    1992-12-31

    A method is given for incorporating diverse varieties of intercalants or templates directly during hydrothermal synthesis of clays such as hectorite or montmorillonite-type layer-silicate clays. For a hectorite layer-silicate clay, refluxing a gel of silica sol, magnesium hydroxide sol and LiF for 2 days with an organic or organometallic intercalant or template results in crystalline products containing either (a) organic dye molecules such as ethyl violet and methyl green, (b) dye molecules such as alcian blue based on a Cu(II)-phthalocyannine complex, or (c) transition metal complexes such as Ru(II)phenanthroline and Co(III)sepulchrate or (d) water-soluble porphyrins and metalloporphyrins. Montmorillonite-type clays are made by the method taught by US patent No. 3,887,454 issued to Hickson, June 13, 1975; however, a variety of intercalants or templates may be introduced. The intercalants or templates should have water-solubility, positive charge, and thermal stability under moderately basic (pH 9-10) aqueous reflux conditions or hydrothermal pressurized conditions for the montmorillonite-type clays.

  18. Performance Templates and the Regulation of Learning

    Science.gov (United States)

    Lyons, Paul

    2009-01-01

    Purpose: The purpose of this paper is to provide a detailed, theoretical underpinning for the training and performance improvement method: performance template (P-T). The efficacy of P-T, with limitations, has been demonstrated in this journal and in others. However, the theoretical bases of the P-T approach had not been well-developed. The other…

  19. Recyclable Waste Paper Sorting Using Template Matching

    Science.gov (United States)

    Osiur Rahman, Mohammad; Hussain, Aini; Scavino, Edgar; Hannan, M. A.; Basri, Hassan

    This paper explores the application of image processing techniques in recyclable waste paper sorting. In recycling, waste papers are segregated into various grades as they are subjected to different recycling processes. Highly sorted paper streams will facilitate high quality end products, and save processing chemicals and energy. Since 1932 to 2009, different mechanical and optical paper sorting methods have been developed to fill the demand of paper sorting. Still, in many countries including Malaysia, waste papers are sorted into different grades using manual sorting system. Due to inadequate throughput and some major drawbacks of mechanical paper sorting systems, the popularity of optical paper sorting systems is increased. Automated paper sorting systems offer significant advantages over human inspection in terms of fatigue, throughput, speed, and accuracy. This research attempts to develop a smart vision sensing system that able to separate the different grades of paper using Template Matching. For constructing template database, the RGB components of the pixel values are used to construct RGBString for template images. Finally, paper object grade is identified based on the maximum occurrence of a specific template image in the search image. The outcomes from the experiment in classification for White Paper, Old Newsprint Paper and Old Corrugated Cardboard are 96%, 92% and 96%, respectively. The remarkable achievement obtained with the method is the accurate identification and dynamic sorting of all grades of papers using simple image processing techniques.

  20. Surgical Templates for Dental Implant Positioning; Current ...

    African Journals Online (AJOL)

    Surgical templates for dental implant. 5. Nigerian Journal of Surgery. Jan‑Jun 2015 | Volume 21 | Issue 1. 18. Tarlow JL. Fabrication of an implant surgical stent for the edentulous mandible. J Prosthet Dent 1992;67:217‑8. 19. Stellino G, Morgano SM, Imbelloni A. A dual‑purpose, implant stent made from a provisional fixed ...

  1. Ceramic microfluidic monoliths by ice templating

    NARCIS (Netherlands)

    Zheng, Jumeng; Salamon, David; Lefferts, Leonardus; Wessling, Matthias; Winnubst, Aloysius J.A.

    2010-01-01

    Meso/macro-porous alumina microfluidic monoliths were fabricated by an ice-templating (or freeze-casting) technique. A (green) compact with sufficient strength is obtained after controlled freezing and simple drying under ambient conditions by starting with an aqueous suspension of a mixture of

  2. Data Clustering

    Science.gov (United States)

    Wagstaff, Kiri L.

    2012-03-01

    On obtaining a new data set, the researcher is immediately faced with the challenge of obtaining a high-level understanding from the observations. What does a typical item look like? What are the dominant trends? How many distinct groups are included in the data set, and how is each one characterized? Which observable values are common, and which rarely occur? Which items stand out as anomalies or outliers from the rest of the data? This challenge is exacerbated by the steady growth in data set size [11] as new instruments push into new frontiers of parameter space, via improvements in temporal, spatial, and spectral resolution, or by the desire to "fuse" observations from different modalities and instruments into a larger-picture understanding of the same underlying phenomenon. Data clustering algorithms provide a variety of solutions for this task. They can generate summaries, locate outliers, compress data, identify dense or sparse regions of feature space, and build data models. It is useful to note up front that "clusters" in this context refer to groups of items within some descriptive feature space, not (necessarily) to "galaxy clusters" which are dense regions in physical space. The goal of this chapter is to survey a variety of data clustering methods, with an eye toward their applicability to astronomical data analysis. In addition to improving the individual researcher’s understanding of a given data set, clustering has led directly to scientific advances, such as the discovery of new subclasses of stars [14] and gamma-ray bursts (GRBs) [38]. All clustering algorithms seek to identify groups within a data set that reflect some observed, quantifiable structure. Clustering is traditionally an unsupervised approach to data analysis, in the sense that it operates without any direct guidance about which items should be assigned to which clusters. There has been a recent trend in the clustering literature toward supporting semisupervised or constrained

  3. Inherent Structure Based Multi-view Learning with Multi-template Feature Representation for Alzheimer’s Disease Diagnosis

    Science.gov (United States)

    Liu, Mingxia; Zhang, Daoqiang; Adeli-Mosabbeb, Ehsan; Shen, Dinggang

    2016-01-01

    Multi-template based brain morphometric pattern analysis using magnetic resonance imaging (MRI) has been recently proposed for automatic diagnosis of Alzheimer’s disease (AD) and its prodromal stage (i.e., mild cognitive impairment or MCI). In such methods, multi-view morphological patterns generated from multiple templates are used as feature representation for brain images. However, existing multi-template based methods often simply assume that each class is represented by a specific type of data distribution (i.e., a single cluster), while in reality the underlying data distribution is actually not pre-known. In this paper, we propose an inherent structure based multi-view leaning (ISML) method using multiple templates for AD/MCI classification. Specifically, we first extract multi-view feature representations for subjects using multiple selected templates, and then cluster subjects within a specific class into several sub-classes (i.e., clusters) in each view space. Then, we encode those sub-classes with unique codes by considering both their original class information and their own distribution information, followed by a multi-task feature selection model. Finally, we learn an ensemble of view-specific support vector machine (SVM) classifiers based on their respectively selected features in each view, and fuse their results to draw the final decision. Experimental results on the Alzheimer’s Disease Neuroimaging Initiative (ADNI) database demonstrate that our method achieves promising results for AD/MCI classification, compared to the state-of-the-art multi-template based methods. PMID:26540666

  4. Computational templates for introductory nuclear science using mathcad

    Science.gov (United States)

    Sarantites, D. G.; Sobotka, L. G.

    2013-01-01

    Computational templates used to teach an introductory course in nuclear chemistry and physics at Washington University in St. Louis are presented in brief. The templates cover both basic and applied topics.

  5. Emergency department documentation templates: variability in template selection and association with physical examination and test ordering in dizziness presentations

    Directory of Open Access Journals (Sweden)

    Meurer William J

    2011-03-01

    Full Text Available Abstract Background Clinical documentation systems, such as templates, have been associated with process utilization. The T-System emergency department (ED templates are widely used but lacking are analyses of the templates association with processes. This system is also unique because of the many different template options available, and thus the selection of the template may also be important. We aimed to describe the selection of templates in ED dizziness presentations and to investigate the association between items on templates and process utilization. Methods Dizziness visits were captured from a population-based study of EDs that use documentation templates. Two relevant process outcomes were assessed: head computerized tomography (CT scan and nystagmus examination. Multivariable logistic regression was used to estimate the probability of each outcome for patients who did or did not receive a relevant-item template. Propensity scores were also used to adjust for selection effects. Results The final cohort was 1,485 visits. Thirty-one different templates were used. Use of a template with a head CT item was associated with an increase in the adjusted probability of head CT utilization from 12.2% (95% CI, 8.9%-16.6% to 29.3% (95% CI, 26.0%-32.9%. The adjusted probability of documentation of a nystagmus assessment increased from 12.0% (95%CI, 8.8%-16.2% when a nystagmus-item template was not used to 95.0% (95% CI, 92.8%-96.6% when a nystagmus-item template was used. The associations remained significant after propensity score adjustments. Conclusions Providers use many different templates in dizziness presentations. Important differences exist in the various templates and the template that is used likely impacts process utilization, even though selection may be arbitrary. The optimal design and selection of templates may offer a feasible and effective opportunity to improve care delivery.

  6. Multi-template analysis of human perirhinal cortex in brain MRI: Explicitly accounting for anatomical variability

    Science.gov (United States)

    Xie, Long; Pluta, John B.; Das, Sandhitsu R.; Wisse, Laura E.M.; Wang, Hongzhi; Mancuso, Lauren; Kliot, Dasha; Avants, Brian B.; Ding, Song-Lin; Manjón, José V.; Wolk, David A.; Yushkevich, Paul A.

    2016-01-01

    Rational The human perirhinal cortex (PRC) plays critical roles in episodic and semantic memory and visual perception. The PRC consists of Brodmann areas 35 and 36 (BA35, BA36). In Alzheimer's disease (AD), BA35 is the first cortical site affected by neurofibrillary tangle pathology, which is closely linked to neural injury in AD. Large anatomical variability, manifested in the form of different cortical folding and branching patterns, makes it difficult to segment the PRC in MRI scans. Pathology studies have found that in ~97% of specimens, the PRC falls into one of three discrete anatomical variants. However, current methods for PRC segmentation and morphometry in MRI are based on single-template approaches, which may not be able to accurately model these discrete variants Methods A multi-template analysis pipeline that explicitly accounts for anatomical variability is used to automatically label the PRC and measure its thickness in T2-weighted MRI scans. The pipeline uses multi-atlas segmentation to automatically label medial temporal lobe cortices including entorhinal cortex, PRC and the parahippocampal cortex. Pairwise registration between label maps and clustering based on residual dissimilarity after registration are used to construct separate templates for the anatomical variants of the PRC. An optimal path of deformations linking these templates is used to establish correspondences between all the subjects. Experimental evaluation focuses on the ability of single-template and multi-template analyses to detect differences in the thickness of medial temporal lobe cortices between patients with amnestic mild cognitive impairment (aMCI, n=41) and age-matched controls (n=44). Results The proposed technique is able to generate templates that recover the three dominant discrete variants of PRC and establish more meaningful correspondences between subjects than a single-template approach. The largest reduction in thickness associated with aMCI, in absolute terms

  7. Business Process Variability : A Tool for Declarative Template Design

    NARCIS (Netherlands)

    Bulanov, P.; Groefsema, H.; Aiello, M.

    2012-01-01

    To lower both implementation time and cost, many Business Process Management tools use process templates to implement highly recurring processes. However, in order for such templates to be used, a process has to adhere substantially to the template. Therefore, current practice for processes which

  8. Templated electrodeposition of functional nanostructures: nanowires, nanotubes and nanocubes

    NARCIS (Netherlands)

    Maijenburg, A.W.

    2014-01-01

    This thesis is entitled “Templated electrodeposition of functional nanostructures: nanowires, nanotubes and nanocubes”. Templated electrodeposition is the synthesis technique that was used throughout this thesis, and it comprises the use of a template with specific shape and dimensions for the

  9. FDG-PET template MNI152 1mm

    DEFF Research Database (Denmark)

    2013-01-01

    A FDG-PET template in MNI space aligned to the MNI152 atlas This PET-FDG template is provided as is free of charge for all purposes, provided that the following paper is cited......(to appear) when ever the template is used. The authors cannot, under any circumstances, be held responsible for any...

  10. Assessing ligand efficiencies using template-based molecular ...

    Indian Academy of Sciences (India)

    Wintec

    on a series of 38 TIBO derivatives as HIV-1 reverse transcriptase (HIV-1 RT) inhibitors. Four different templates of the Cl-TIBO (1-REV) were created and used as reference templates for docking and align- ing. On the basis of the optimal conformation of the ligands, when fitting to the template, the respective scoring functions ...

  11. Approximation Clustering

    Indian Academy of Sciences (India)

    First page Back Continue Last page Overview Graphics. Approximation Clustering. Clustering within (1+ ε) of the optimum cost. ε is user defined tolerance. For metric spaces even approximating is. hard (below, say 30%). Euclidean k-median in fixed dimension can. be approximated in polynomial time.

  12. Cluster Matters

    DEFF Research Database (Denmark)

    Gulati, Mukesh; Lund-Thomsen, Peter; Suresh, Sangeetha

    2018-01-01

    In this chapter, we investigate corporate social responsibility (CSR) in industrial clusters in the Indian context. We use the definition of CSR as given in the Indian Ministry of Corporate Affairs’ National Voluntary Guidelines (NVGs) for Business Responsibility: ‘the commitment of an enterprise...... sell their products successfully in international markets, but there is also an increasingly large consumer base within India. Indeed, Indian industrial clusters have contributed to a substantial part of this growth process, and there are several hundred registered clusters within the country....... At the same time, several attempts have been made at promoting the adoption of CSR in MSMEs in Indian industrial clusters. In fact, India has proved to be a kind of laboratory for experimenting with different types of cluster-based CSR and is thus an interesting location in relation to the broader aim...

  13. Toward the Development of Cluster-Based Materials

    Energy Technology Data Exchange (ETDEWEB)

    Bowen, Kit H. [Johns Hopkins University

    1995-06-01

    Our research program provided experimental results that made fundamental, underpinning contributions to the development of cluster-based materials. Specific topics we have studied include the non-metal-to-metallic transition in divalent metal clusters, the search for (and discovery of) theoretically-predicted, ionically-bonded cluster-assembled “molecules” and other Magic Clusters, the interaction of transition metal atoms and clusters with organic molecular templates, the synthesis and characterization of Zintl phase clusters, the magnetic properties of semiconductor clusters, the molecular properties of electronic materials, the magnetic properties of silicon-encapsulated rare earth metal atom cages, and the magnetic and electronic properties of gold/silica and gold/iron clusters.

  14. CPU and GPU (Cuda Template Matching Comparison

    Directory of Open Access Journals (Sweden)

    Evaldas Borcovas

    2014-05-01

    Full Text Available Image processing, computer vision or other complicated opticalinformation processing algorithms require large resources. It isoften desired to execute algorithms in real time. It is hard tofulfill such requirements with single CPU processor. NVidiaproposed CUDA technology enables programmer to use theGPU resources in the computer. Current research was madewith Intel Pentium Dual-Core T4500 2.3 GHz processor with4 GB RAM DDR3 (CPU I, NVidia GeForce GT320M CUDAcompliable graphics card (GPU I and Intel Core I5-2500K3.3 GHz processor with 4 GB RAM DDR3 (CPU II, NVidiaGeForce GTX 560 CUDA compatible graphic card (GPU II.Additional libraries as OpenCV 2.1 and OpenCV 2.4.0 CUDAcompliable were used for the testing. Main test were made withstandard function MatchTemplate from the OpenCV libraries.The algorithm uses a main image and a template. An influenceof these factors was tested. Main image and template have beenresized and the algorithm computing time and performancein Gtpix/s have been measured. According to the informationobtained from the research GPU computing using the hardwarementioned earlier is till 24 times faster when it is processing abig amount of information. When the images are small the performanceof CPU and GPU are not significantly different. Thechoice of the template size makes influence on calculating withCPU. Difference in the computing time between the GPUs canbe explained by the number of cores which they have.

  15. Deep Human Parsing with Active Template Regression.

    Science.gov (United States)

    Liang, Xiaodan; Liu, Si; Shen, Xiaohui; Yang, Jianchao; Liu, Luoqi; Dong, Jian; Lin, Liang; Yan, Shuicheng

    2015-12-01

    In this work, the human parsing task, namely decomposing a human image into semantic fashion/body regions, is formulated as an active template regression (ATR) problem, where the normalized mask of each fashion/body item is expressed as the linear combination of the learned mask templates, and then morphed to a more precise mask with the active shape parameters, including position, scale and visibility of each semantic region. The mask template coefficients and the active shape parameters together can generate the human parsing results, and are thus called the structure outputs for human parsing. The deep Convolutional Neural Network (CNN) is utilized to build the end-to-end relation between the input human image and the structure outputs for human parsing. More specifically, the structure outputs are predicted by two separate networks. The first CNN network is with max-pooling, and designed to predict the template coefficients for each label mask, while the second CNN network is without max-pooling to preserve sensitivity to label mask position and accurately predict the active shape parameters. For a new image, the structure outputs of the two networks are fused to generate the probability of each label for each pixel, and super-pixel smoothing is finally used to refine the human parsing result. Comprehensive evaluations on a large dataset well demonstrate the significant superiority of the ATR framework over other state-of-the-arts for human parsing. In particular, the F1-score reaches 64.38 percent by our ATR framework, significantly higher than 44.76 percent based on the state-of-the-art algorithm [28].

  16. Clustering Dycom

    KAUST Repository

    Minku, Leandro L.

    2017-10-06

    Background: Software Effort Estimation (SEE) can be formulated as an online learning problem, where new projects are completed over time and may become available for training. In this scenario, a Cross-Company (CC) SEE approach called Dycom can drastically reduce the number of Within-Company (WC) projects needed for training, saving the high cost of collecting such training projects. However, Dycom relies on splitting CC projects into different subsets in order to create its CC models. Such splitting can have a significant impact on Dycom\\'s predictive performance. Aims: This paper investigates whether clustering methods can be used to help finding good CC splits for Dycom. Method: Dycom is extended to use clustering methods for creating the CC subsets. Three different clustering methods are investigated, namely Hierarchical Clustering, K-Means, and Expectation-Maximisation. Clustering Dycom is compared against the original Dycom with CC subsets of different sizes, based on four SEE databases. A baseline WC model is also included in the analysis. Results: Clustering Dycom with K-Means can potentially help to split the CC projects, managing to achieve similar or better predictive performance than Dycom. However, K-Means still requires the number of CC subsets to be pre-defined, and a poor choice can negatively affect predictive performance. EM enables Dycom to automatically set the number of CC subsets while still maintaining or improving predictive performance with respect to the baseline WC model. Clustering Dycom with Hierarchical Clustering did not offer significant advantage in terms of predictive performance. Conclusion: Clustering methods can be an effective way to automatically generate Dycom\\'s CC subsets.

  17. A comparison with result of normalized image to different template image on statistical parametric mapping of ADHD children patients

    Energy Technology Data Exchange (ETDEWEB)

    Shin, Dong Ho [Kyonggi University, Suwon (Korea, Republic of); Park, Soung Ock; Kwon, Soo Il [Dongnam Health College, Suwon (Korea, Republic of); Joh, Chol Woo; Yoon, Seok Nam [Medical College, Ajou University, Suwon (Korea, Republic of)

    2003-06-15

    We studied 64 ADHD children patients group (4 {approx} 15 ys, mean age: 8 {+-} 2.6 ys. M/F: 52/12) and 12 normal group (6 {approx} 7 ys, mean age: 9.4 {+-} 3.4 ys, M/F: 8/4) of the brain had been used to analysis of blood flow between normal and ADHD group. For analysis of Children ADHD, we used 12 children's mean brain images and made Template image of SPM99 program. In crease of blood flow (P-value 0.05), the result of normalized images to Template image to offer from SPM99 program, showed significant cluster in inter-Hemispheric and occipital Lobe, in the case of normalized images to children template image, showed inter-hemispheric and parietal lobe.

  18. Cluster analysis

    CERN Document Server

    Everitt, Brian S; Leese, Morven; Stahl, Daniel

    2011-01-01

    Cluster analysis comprises a range of methods for classifying multivariate data into subgroups. By organizing multivariate data into such subgroups, clustering can help reveal the characteristics of any structure or patterns present. These techniques have proven useful in a wide range of areas such as medicine, psychology, market research and bioinformatics.This fifth edition of the highly successful Cluster Analysis includes coverage of the latest developments in the field and a new chapter dealing with finite mixture models for structured data.Real life examples are used throughout to demons

  19. Immunophenotype Discovery, Hierarchical Organization, and Template-based Classification of Flow Cytometry Samples

    Directory of Open Access Journals (Sweden)

    Ariful Azad

    2016-08-01

    Full Text Available We describe algorithms for discovering immunophenotypes from large collections of flow cytometry (FC samples, and using them to organize the samples into a hierarchy based on phenotypic similarity. The hierarchical organization is helpful for effective and robust cytometry data mining, including the creation of collections of cell populations characteristic of different classes of samples, robust classification, and anomaly detection. We summarize a set of samples belonging to a biological class or category with a statistically derived template for the class. Whereas individual samples are represented in terms of their cell populations (clusters, a template consists of generic meta-populations (a group of homogeneous cell populations obtained from the samples in a class that describe key phenotypes shared among all those samples. We organize an FC data collection in a hierarchical data structure that supports the identification of immunophenotypes relevant to clinical diagnosis. A robust template-based classification scheme is also developed, but our primary focus is in the discovery of phenotypic signatures and inter-sample relationships in an FC data collection. This collective analysis approach is more efficient and robust since templates describe phenotypic signatures common to cell populations in several samples, while ignoring noise and small sample-specific variations.We have applied the template-base scheme to analyze several data setsincluding one representing a healthy immune system, and one of Acute Myeloid Leukemia (AMLsamples. The last task is challenging due to the phenotypic heterogeneity of the severalsubtypes of AML. However, we identified thirteen immunophenotypes corresponding to subtypes of AML, and were able to distinguish Acute Promyelocytic Leukemia from other subtypes of AML.

  20. DNA-Protected Silver Clusters for Nanophotonics

    Directory of Open Access Journals (Sweden)

    Elisabeth Gwinn

    2015-02-01

    Full Text Available DNA-protected silver clusters (AgN-DNA possess unique fluorescence properties that depend on the specific DNA template that stabilizes the cluster. They exhibit peak emission wavelengths that range across the visible and near-IR spectrum. This wide color palette, combined with low toxicity, high fluorescence quantum yields of some clusters, low synthesis costs, small cluster sizes and compatibility with DNA are enabling many applications that employ AgN-DNA. Here we review what is known about the underlying composition and structure of AgN-DNA, and how these relate to the optical properties of these fascinating, hybrid biomolecule-metal cluster nanomaterials. We place AgN-DNA in the general context of ligand-stabilized metal clusters and compare their properties to those of other noble metal clusters stabilized by small molecule ligands. The methods used to isolate pure AgN-DNA for analysis of composition and for studies of solution and single-emitter optical properties are discussed. We give a brief overview of structurally sensitive chiroptical studies, both theoretical and experimental, and review experiments on bringing silver clusters of distinct size and color into nanoscale DNA assemblies. Progress towards using DNA scaffolds to assemble multi-cluster arrays is also reviewed.

  1. A Neonatal Bimodal MR-CT Head Template.

    Directory of Open Access Journals (Sweden)

    Sona Ghadimi

    Full Text Available Neonatal MR templates are appropriate for brain structural analysis and spatial normalization. However, they do not provide the essential accurate details of cranial bones and fontanels-sutures. Distinctly, CT images provide the best contrast for bone definition and fontanels-sutures. In this paper, we present, for the first time, an approach to create a fully registered bimodal MR-CT head template for neonates with a gestational age of 39 to 42 weeks. Such a template is essential for structural and functional brain studies, which require precise geometry of the head including cranial bones and fontanels-sutures. Due to the special characteristics of the problem (which requires inter-subject inter-modality registration, a two-step intensity-based registration method is proposed to globally and locally align CT images with an available MR template. By applying groupwise registration, the new neonatal CT template is then created in full alignment with the MR template to build a bimodal MR-CT template. The mutual information value between the CT and the MR template is 1.17 which shows their perfect correspondence in the bimodal template. Moreover, the average mutual information value between normalized images and the CT template proposed in this study is 1.24±0.07. Comparing this value with the one reported in a previously published approach (0.63±0.07 demonstrates the better generalization properties of the new created template and the superiority of the proposed method for the creation of CT template in the standard space provided by MR neonatal head template. The neonatal bimodal MR-CT head template is freely downloadable from https://www.u-picardie.fr/labo/GRAMFC.

  2. Cluster editing

    DEFF Research Database (Denmark)

    Böcker, S.; Baumbach, Jan

    2013-01-01

    The Cluster Editing problem asks to transform a graph into a disjoint union of cliques using a minimum number of edge modifications. Although the problem has been proven NP-complete several times, it has nevertheless attracted much research both from the theoretical and the applied side. The prob......The Cluster Editing problem asks to transform a graph into a disjoint union of cliques using a minimum number of edge modifications. Although the problem has been proven NP-complete several times, it has nevertheless attracted much research both from the theoretical and the applied side....... The problem has been the inspiration for numerous algorithms in bioinformatics, aiming at clustering entities such as genes, proteins, phenotypes, or patients. In this paper, we review exact and heuristic methods that have been proposed for the Cluster Editing problem, and also applications...

  3. The Grid[Way] Job Template Manager, a tool for parameter sweeping

    Science.gov (United States)

    Lorca, Alejandro; Huedo, Eduardo; Llorente, Ignacio M.

    2011-04-01

    Parameter sweeping is a widely used algorithmic technique in computational science. It is specially suited for high-throughput computing since the jobs evaluating the parameter space are loosely coupled or independent. A tool that integrates the modeling of a parameter study with the control of jobs in a distributed architecture is presented. The main task is to facilitate the creation and deletion of job templates, which are the elements describing the jobs to be run. Extra functionality relies upon the GridWay Metascheduler, acting as the middleware layer for job submission and control. It supports interesting features like multi-dimensional sweeping space, wildcarding of parameters, functional evaluation of ranges, value-skipping and job template automatic indexation. The use of this tool increases the reliability of the parameter sweep study thanks to the systematic bookkeeping of job templates and respective job statuses. Furthermore, it simplifies the porting of the target application to the grid reducing the required amount of time and effort. Program summaryProgram title: Grid[Way] Job Template Manager (version 1.0) Catalogue identifier: AEIE_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEIE_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Apache license 2.0 No. of lines in distributed program, including test data, etc.: 3545 No. of bytes in distributed program, including test data, etc.: 126 879 Distribution format: tar.gz Programming language: Perl 5.8.5 and above Computer: Any (tested on PC x86 and x86_64) Operating system: Unix, GNU/Linux (tested on Ubuntu 9.04, Scientific Linux 4.7, centOS 5.4), Mac OS X (tested on Snow Leopard 10.6) RAM: 10 MB Classification: 6.5 External routines: The GridWay Metascheduler [1]. Nature of problem: To parameterize and manage an application running on a grid or cluster. Solution method: Generation of job templates as a cross product of

  4. Investigation of metal hydride nanoparticles templated in metal organic frameworks.

    Energy Technology Data Exchange (ETDEWEB)

    Jacobs, Benjamin W.; Herberg, Julie L. (Lawrence Livermore National Laboratory, Livermore, CA); Highley, Aaron M.; Grossman, Jeffrey (MIT, Cambridge, MA); Wagner, Lucas (MIT, Cambridge, MA); Bhakta, Raghu; Peaslee, D. (University of Missouri, St. Louis, MO); Allendorf, Mark D.; Liu, X. (University of Missouri, St. Louis, MO); Behrens, Richard, Jr.; Majzoub, Eric H. (University of Missouri, St. Louis, MO)

    2010-11-01

    Hydrogen is proposed as an ideal carrier for storage, transport, and conversion of energy. However, its storage is a key problem in the development of hydrogen economy. Metal hydrides hold promise in effectively storing hydrogen. For this reason, metal hydrides have been the focus of intensive research. The chemical bonds in light metal hydrides are predominantly covalent, polar covalent or ionic. These bonds are often strong, resulting in high thermodynamic stability and low equilibrium hydrogen pressures. In addition, the directionality of the covalent/ionic bonds in these systems leads to large activation barriers for atomic motion, resulting in slow hydrogen sorption kinetics and limited reversibility. One method for enhancing reaction kinetics is to reduce the size of the metal hydrides to nano scale. This method exploits the short diffusion distances and constrained environment that exist in nanoscale hydride materials. In order to reduce the particle size of metal hydrides, mechanical ball milling is widely used. However, microscopic mechanisms responsible for the changes in kinetics resulting from ball milling are still being investigated. The objective of this work is to use metal organic frameworks (MOFs) as templates for the synthesis of nano-scale NaAlH4 particles, to measure the H2 desorption kinetics and thermodynamics, and to determine quantitative differences from corresponding bulk properties. Metal-organic frameworks (MOFs) offer an attractive alternative to traditional scaffolds because their ordered crystalline lattice provides a highly controlled and understandable environment. The present work demonstrates that MOFs are stable hosts for metal hydrides and their reactive precursors and that they can be used as templates to form metal hydride nanoclusters on the scale of their pores (1-2 nm). We find that using the MOF HKUST-1 as template, NaAlH4 nanoclusters as small as 8 formula units can be synthesized inside the pores. A detailed picture of

  5. Progress of UV-NIL template making

    Science.gov (United States)

    Hiraka, Takaaki; Mizuochi, Jun; Nakanishi, Yuko; Yusa, Satoshi; Sasaki, Shiho; Morikawa, Yasutaka; Mohri, Hiroshi; Hayashi, Naoya

    2009-04-01

    Nano-imprint lithography (NIL) has been counted as one of the lithography candidates for hp32nm node and beyond and has showed excellent resolution capability with remarkable low line edge roughness that is attracting many researchers in the industry who were searching for the finest patterning technology. Therefore, recently we have been focusing on the resolution improvement on the NIL templates with the 100keV acceleration voltage spot beam (SB) EB writer and the 50keV acceleration voltage variable shaped beam (VSB) EB writer. The 100keV SB writers have high resolution capability, but they show fatally low throughput if we need full chip writing. Usually templates for resolution pioneers needed just a small field (several hundred microns square or so), but recently requirements for full chip templates are increasing. For full chip writing, we have also started the resolution improvement with the 50keV VSB writers used in current 4X photomask manufacturing. The 50keV VSB writers could generate full chip pattern in a reasonable time though resolution limits are inferior to that with the 100keV SB writers. In this paper, we will show latest results with both the 100keV SB and the 50keV VSB EB writers. With the 100keV SB EB writer, we have achieved down to hp15nm resolution for line and space pattern, but found that to achieve further improvement, an innovation in pattern generation method or material would be inevitable. With the 50keV VSB EB writer, we have achieved down to hp22nm resolution for line and space pattern. Though NIL has excellent resolution capability, solutions for defect inspection and repair are not clearly shown yet. In this paper, we will show preliminary inspection results with an EB inspection tool. We tested an EB inspection tool by Hermes Microvision, Inc. (HMI), which was originally developed for and are currently used as a wafer inspection tool, and now have been started to seek the application for mask use, using a programmed defect

  6. Robust structural identification via polyhedral template matching

    DEFF Research Database (Denmark)

    Larsen, Peter Mahler; Schmidt, Søren; Schiøtz, Jakob

    2016-01-01

    thresholds thereof) to classify atomic structure. As a consequence they are sensitive to strain and thermal displacements, and preprocessing such as quenching or temporal averaging of the atomic positions is necessary to provide reliable identifications. We propose a new method, polyhedral template matching...... to identify structures even in simulations near the melting point, and that it can identify the most common ordered alloy structures as well. In addition, the method makes it easy to identify the local lattice orientation in polycrystalline samples, and to calculate the local strain tensor. An implementation...

  7. Bussines Clusters

    Directory of Open Access Journals (Sweden)

    Sarmiza Pencea

    2010-10-01

    Full Text Available Clusters are complex economic structures in which similar companies, their up-stream and down-stream business partners, universities, research institutes, educational units, various service providers, diverse private and public institutions concentrate geografically, striving to get economies of agglomeration and scale, to capitalize on the resulting spill over effects, to cut costs, to better harness resources, to exchange information and experience, to improve quality, innovation, skills and productivity. By somehow unexpectedly combining competition and cooperation, they form a new, sophisticated stage in the evolution of production structures in quest of higher efficiency. This paper forays into the world of clusters and clusterization, which seem to increasingly capture the interest of businesses, scholars and policy makers. It looks at what clusters are, how they arise, what are their specific features, what benefits and challenges they can generate for companies and for the regions in which they locate and if and how they should be fostered by industrial policy interventions. The conclusion is that clusters can be very important development triggers and therefore they should be encouraged and nurtured by adequate policy measures. They should not only be used as a regular policy tool, but be placed at the very center of the development strategies of emerging economies.

  8. Cluster forcing

    DEFF Research Database (Denmark)

    Christensen, Thomas Budde

    The cluster theory attributed to Michael Porter has significantly influenced industrial policies in countries across Europe and North America since the beginning of the 1990s. Institutions such as the EU, OECD and the World Bank and governments in countries such as the UK, France, The Netherlands......, Portugal and New Zealand have adopted the concept. Public sector interventions that aim to support cluster development in industries most often focus upon economic policy goals such as enhanced employment and improved productivity, but rarely emphasise broader societal policy goals relating to e.......g. sustainability or quality of life. The purpose of this paper is to explore how and to what extent public sector interventions that aim at forcing cluster development in industries can support sustainable development as defined in the Brundtland tradition and more recently elaborated in such concepts as eco-industrialism...

  9. Silicon template preparation for the fabrication of thin patterned gold films via template stripping

    Science.gov (United States)

    Schmidl, G.; Dellith, J.; Dellith, A.; Teller, N.; Zopf, D.; Li, G.; Dathe, A.; Mayer, G.; Hübner, U.; Zeisberger, M.; Stranik, O.; Fritzsche, W.

    2015-12-01

    Metallic nanostructures play an important role in the vast field of modern nanophotonics, which ranges from the life sciences to biomedicine and beyond. Gold is a commonly-used and attractive material for plasmonics in the visible wavelength range, most importantly due to its chemical stability. In the present work, we focused on the different methods of plasmonic nanostructure fabrication that possess the greatest potential for cost-efficient fabrication. Initially, reusable (1 0 0) silicon templates were prepared. For this purpose, three different lithography methods (i.e. e-beam, optical, and nanoparticle lithography) were used that correspond to the desired structural scales. The application of a subsequent anisotropic crystal orientation-dependent wet etching process produced well-defined pyramidal structures in a wide variety of sizes, ranging from several microns to less than 100 nm. Finally, a 200 nm-thick gold layer was deposited by means of confocal sputtering on the silicon templates and stripped in order to obtain gold films that feature a surface replica of the initial template structure. The surface roughness that was achieved on the stripped films corresponds well with the roughness of the template used. This makes it possible to prepare cost-efficient high-quality structured films in large quantities with little effort. The gold films produced were thoroughly characterized, particularly with respect to their plasmonic response.

  10. 20 The Tools - 07 Threshold Concepts - Threshold Concepts: Poster template (TC poster template for case study)

    OpenAIRE

    TfLN-Transforming Perspectives project

    2007-01-01

    Part of a toolkit used in the Transforming Perspectives project, looking at using 'threshold concepts' as a framework for identifying areas of conceptual difficulty in disciplinary curricula. This is a blank 'poster' template used by the project by participants sharing 'their' identified threshold concepts with other participants at a seminar series.

  11. Biocompatibility of Soft-Templated Mesoporous Carbons

    Energy Technology Data Exchange (ETDEWEB)

    Gencoglu, Maria F. [Michigan Technological Univ., Houghton, MI (United States). Dept. of Chemical Engineering; Spurri, Amanda [Widener Univ., Chester, PA (United States). Dept. of Chemical Engineering; Franko, Mitchell [Widener Univ., Chester, PA (United States). Dept. of Chemical Engineering; Chen, Jihua [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). Center for Nanophase Materials Science (CNMS); Hensley, Dale K. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). Center for Nanophase Materials Science (CNMS); Heldt, Caryn L. [Michigan Technological Univ., Houghton, MI (United States). Dept. of Chemical Engineering; Saha, Dipendu [Widener Univ., Chester, PA (United States). Dept. of Chemical Engineering

    2014-08-21

    We report that soft-templated mesoporous carbon is morphologically a non-nano type of carbon. It is a relatively newer variety of biomaterial, which has already demonstrated its successful role in drug delivery applications. To investigate the toxicity and biocompatibility, we introduced three types of mesoporous carbons with varying synthesis conditions and pore textural properties. We compared the Brunauer–Emmett–Teller (BET) surface area and pore width and performed cytotoxicity experiments with HeLa cells, cell viability studies with fibroblast cells and hemocomapatibility studies. Cytotoxicity tests reveal that two of the carbons are not cytotoxic, with cell survival over 90%. The mesoporous carbon with the highest surface area showed slight toxicity (~70% cell survival) at the highest carbon concentration of 500 μg/mL. Fibroblast cell viability assays suggested high and constant viability of over 98% after 3 days with no apparent relation with materials property and good visible cell-carbon compatibility. No hemolysis (<1%) was confirmed for all the carbon materials. Protein adsorption experiments with bovine serum albumin (BSA) and fibrinogen revealed a lower protein binding capacity of 0.2–0.6 mg/m2 and 2–4 mg/m2 for BSA and fibrinogen, respectively, with lower binding associated with an increase in surface area. The results of this study confirm the biocompatibility of soft-templated mesoporous carbons.

  12. Kinetic theory of amyloid fibril templating.

    Science.gov (United States)

    Schmit, Jeremy D

    2013-05-14

    The growth of amyloid fibrils requires a disordered or partially unfolded protein to bind to the fibril and adapt the same conformation and alignment established by the fibril template. Since the H-bonds stabilizing the fibril are interchangeable, it is inevitable that H-bonds form between incorrect pairs of amino acids which are either incorporated into the fibril as defects or must be broken before the correct alignment can be found. This process is modeled by mapping the formation and breakage of H-bonds to a one-dimensional random walk. The resulting microscopic model of fibril growth is governed by two timescales: the diffusion time of the monomeric proteins, and the time required for incorrectly bound proteins to unbind from the fibril. The theory predicts that the Arrhenius behavior observed in experiments is due to off-pathway states rather than an on-pathway transition state. The predicted growth rates are in qualitative agreement with experiments on insulin fibril growth rates as a function of protein concentration, denaturant concentration, and temperature. These results suggest a templating mechanism where steric clashes due to a single mis-aligned molecule prevent the binding of additional molecules.

  13. Weaving Nanoscale Cloth through Electrostatic Templating.

    Science.gov (United States)

    Champsaur, Anouck M; Mézière, Cécile; Allain, Magali; Paley, Daniel W; Steigerwald, Michael L; Nuckolls, Colin; Batail, Patrick

    2017-08-30

    Here we disclose a simple route to nanoscopic 2D woven structures reminiscent of the methods used to produce macroscopic textiles. We find that the same principles used in macroscopic weaving can be applied on the nanoscale to create two-dimensional molecular cloth from polymeric strands, a molecular thread. The molecular thread is composed of Co6Se8(PEt3)4L2 superatoms that are bridged with L = benzene bis-1,4-isonitrile to form polymer strands. As the superatoms that make up the polymer chain are electrochemically oxidized, they are electrostatically templated by a nanoscale anion, the tetragonal Lindqvist polyoxometalate Mo6O19(2-). The tetragonal symmetry of the dianionic template creates a nanoscale version of the box weave. The crossing points in the weave feature π-stacking of the bridging linker. By examining the steps in the weaving process with single crystal X-ray diffraction, we find that the degree of polymerization at the crossing points is crucial in the cloth formation. 2D nanoscale cloth will provide access to a new generation of smart, multifunctional materials, coatings, and surfaces.

  14. Templated electrodeposition of functional nanostructures: nanowires, nanotubes and nanocubes

    OpenAIRE

    Maijenburg, A.W.

    2014-01-01

    This thesis is entitled “Templated electrodeposition of functional nanostructures: nanowires, nanotubes and nanocubes”. Templated electrodeposition is the synthesis technique that was used throughout this thesis, and it comprises the use of a template with specific shape and dimensions for the formation of different types of nanostructures. Throughout this thesis, three different nanostructures were made: nanowires (Chapters 2 to 6), nanotubes (Chapters 2 and 5) and nanocubes (Chapters 7 and ...

  15. Implementation of a template management interface for document systems

    OpenAIRE

    Kmet, Damjan

    2010-01-01

    In the development of document management systems we are often confronted with the implementation of office packages into the document management system. By doing this, we face similar concerns regarding the implementation of the template, therefore we can put the requirements together and create an interface to manage the template into the document management system. The interface can shorten the time required for the construction and maintenance of templates of the office packages in the do...

  16. Templating fullerenes by domain boundaries of a nanoporous network.

    Science.gov (United States)

    den Boer, Duncan; Han, Ggoch Ddeul; Swager, Timothy M

    2014-01-28

    We present a new templating approach that combines the templating properties of nanoporous networks with the dynamic properties and the lattice mismatch of domain boundaries. This templating approach allows for the inclusion of guests with different sizes without the need for a strict molecular design to tailor the nanoporous network. With this approach, nonperiodic patterns of functional molecules can be formed and studied. We show that domain boundaries in a trimesic acid network are preferred over pores within the network as adsorption sites for fullerenes by a factor of 100-200. Pristine fullerenes of different sizes and functionalized fullerenes were templated in this way.

  17. Directed self-assembly graphoepitaxy template generation with immersion lithography

    Science.gov (United States)

    Ma, Yuansheng; Lei, Junjiang; Andres Torres, J.; Hong, Le; Word, James; Fenger, Germain; Tritchkov, Alexander; Lippincott, George; Gupta, Rachit; Lafferty, Neal; He, Yuan; Bekaert, Joost; Vanderberghe, Geert

    2015-07-01

    We present an optimization methodology for the template designs of subresolution contacts using directed self-assembly (DSA) with graphoepitaxy and immersion lithography. We demonstrate the flow using a 60-nm-pitch contact design in doublet with Monte Carlo simulations for DSA. We introduce the notion of template error enhancement factor (TEEF) to gauge the sensitivity of DSA printing infidelity to template printing infidelity and evaluate optimized template designs with TEEF metrics. Our data show that source mask optimization and inverse lithography technology are critical to achieve sub-80 nm non-L0 pitches for DSA patterns using 193i.

  18. Continuous detection of cerebral vasodilatation and vasoconstriction using intracranial pulse morphological template matching.

    Directory of Open Access Journals (Sweden)

    Shadnaz Asgari

    Full Text Available Although accurate and continuous assessment of cerebral vasculature status is highly desirable for managing cerebral vascular diseases, no such method exists for current clinical practice. The present work introduces a novel method for real-time detection of cerebral vasodilatation and vasoconstriction using pulse morphological template matching. Templates consisting of morphological metrics of cerebral blood flow velocity (CBFV pulse, measured at middle cerebral artery using Transcranial Doppler, are obtained by applying a morphological clustering and analysis of intracranial pulse algorithm to the data collected during induced vasodilatation and vasoconstriction in a controlled setting. These templates were then employed to define a vasodilatation index (VDI and a vasoconstriction index (VCI for any inquiry data segment as the percentage of the metrics demonstrating a trend consistent with those obtained from the training dataset. The validation of the proposed method on a dataset of CBFV signals of 27 healthy subjects, collected with a similar protocol as that of training dataset, during hyperventilation (and CO₂ rebreathing tests shows a sensitivity of 92% (and 82% for detection of vasodilatation (and vasoconstriction and the specificity of 90% (and 92%, respectively. Moreover, the proposed method of detection of vasodilatation (vasoconstriction is capable of rejecting all the cases associated with vasoconstriction (vasodilatation and outperforms other two conventional techniques by at least 7% for vasodilatation and 19% for vasoconstriction.

  19. Fuzzy Clustering

    DEFF Research Database (Denmark)

    Berks, G.; Keyserlingk, Diedrich Graf von; Jantzen, Jan

    2000-01-01

    and clustering are the basic concerns in medicine. Classification depends on definitions of the classes and their required degree of participant of the elements in the cases' symptoms. In medicine imprecise conditions are the rule and therefore fuzzy methods are much more suitable than crisp ones. Fuzzy c...

  20. A nanosized {Ag@Ag12} "molecular windmill" templated by polyoxometalates anions.

    Science.gov (United States)

    Wang, Lei; Yang, Weiting; Zhu, Wei; Guan, Xingang; Xie, Zhigang; Sun, Zhong-Ming

    2014-11-03

    Reaction of multidentate 5-(4-imidazol-1-yl-phenyl)-2H-tetrazole (L) ligand with Ag(I) ions in the existence of H3PW12O40 as anionic template under hydrothermal conditions results in tridecanuclear silver cluster-polyoxometalates hybrid: {Ag13L12}{PW12O40}4·30H2O (1). X-ray single crystal diffraction analysis indicates that the main structural feature of 1 is a nanosized molecular windmill-shaped polynuclear Ag cluster with intriguing {M@M12}-type cuboctahedral topology. The as-synthesized compound exhibits effective photocatalytic activity in the photodegradation of Rhodamine-B (RhB) and antibacterial activity against Escherichia coli, respectively.

  1. Virus Assemblies as Templates for Nanocircuits

    Energy Technology Data Exchange (ETDEWEB)

    James N Culver; Michael T Harris

    2011-08-31

    The goals of this project were directed at the identification and characterization of bio-mineralization processes and patterning methods for the development of nano scale materials and structures with novel energy and conductive traits. This project utilized a simple plant virus as a model template to investigate methods to attach and coat metals and other inorganic compounds onto biologically based nanotemplates. Accomplishments include: the development of robust biological nanotemplates with enhanced inorganic coating activities; novel coating strategies that allow for the deposition of a continuous inorganic layer onto a bio-nanotemplate even in the absence of a reducing agent; three-dimensional patterning methods for the assemble of nano-featured high aspect ratio surfaces and the demonstrated use of these surfaces in enhancing battery and energy storage applications. Combined results from this project have significantly advanced our understanding and ability to utilize the unique self-assembly properties of biologically based molecules to produce novel materials at the nanoscale level.

  2. Cluster Headache.

    Science.gov (United States)

    Salvesen

    1999-11-01

    The care of patients with cluster headache has at least two goals: 1) immediately abolishing an ongoing attack and 2) stopping or shortening a bout (a cluster period). The fierceness and the relative brevity of the attacks dictate the use of a fast-acting agent. There are probably three agents fulfilling these criteria: sumatriptan (by subcutaneous injection), oxygen (inhaled through a face mask), and ergotamines (by injection or, perhaps, sublingual tablets). An abundance of data from controlled studies as well as recent clinical experience probably favors sumatriptan as the most effective alternative, the most significant drawback being its high cost. Oxygen inhalation is free of side effects and may be effective but is inconvenient to use. Ergotamines in tablet form act less rapidly, and there are more contraindications to their use. In short-term prophylaxis, however, ergotamine may still be a drug of choice if the timing of the attacks allows planned use of the drug shortly before the attack. If the timing is more irregular, steroids may at least temporarily break a cycle (eg, prednisolone, 60 or 80 mg/d, gradually tapered to zero in 3 to 4 weeks). If more long-lasting prophylaxis is needed or expected, lithium carbonate, 900 mg/d, or verapamil, 360 mg/d, both have reasonable response rates. As for chronic cluster headache, lithium probably will still be the drug of choice. For a very limited group of patients with chronic cluster headache, surgery may be a last resort. The best surgical options are probably radiofrequency rhizotomy or microvascular decompression of the trigeminal nerve.

  3. A generic process template for continuous pharmaceutical production

    DEFF Research Database (Denmark)

    Singh, Ravendra; Rozada-Sanches, Raquel; Dean, William

    2012-01-01

    In the work reported here, a conceptual generic continuous process template for pharmaceutical production is presented. The template is demonstrated on a nitro reduction case study that should in principle be generic such that it can handle a series of substrates with similar molecular...

  4. Excel Template For Processing Examination Results For Higher

    African Journals Online (AJOL)

    ABSTRACT: In this work, we designed, developed and implemented an examination result processing template for all the Postgraduate programmes in the Faculty of Science, Kaduna State. University, Kaduna. The designed template when fed in with data computes and grades students appropriately. Its design was done ...

  5. Transdisciplinary Pedagogical Templates and Their Potential for Adaptive Reuse

    Science.gov (United States)

    Dobozy, Eva; Dalziel, James

    2016-01-01

    This article explores the use and usefulness of carefully designed transdisciplinary pedagogical templates (TPTs) aligned to different learning theories. The TPTs are based on the Learning Design Framework outlined in the Larnaca Declaration (Dalziel et al. in this collection). The generation of pedagogical plans or templates is not new. However,…

  6. A non-parametric 2D deformable template classifier

    DEFF Research Database (Denmark)

    Schultz, Nette; Nielsen, Allan Aasbjerg; Conradsen, Knut

    2005-01-01

    feature space the ship-master will be able to interactively define a segmentation map, which is refined and optimized by the deformable template algorithms. The deformable templates are defined as two-dimensional vector-cycles. Local random transformations are applied to the vector-cycles, and stochastic...

  7. New NIR light-curve templates for classical Cepheids

    NARCIS (Netherlands)

    Inno, L.; Matsunaga, N.; Romaniello, M.; Bono, G.; Monson, A.; Ferraro, I.; Iannicola, G.; Persson, E.; Buonanno, R.; Freedman, W.; Gieren, W.; Groenewegen, M.A.T.; Ita, Y.; Laney, C.D.; Lemasle, B.; Madore, B.F.; Nagayama, T.; Nakada, Y.; Nonino, M.; Pietrzyński, G.; Primas, F.; Scowcroft, V.; Soszyński, I.; Tanabé, T.; Udalski, A.

    2015-01-01

    Aims. We present new near-infrared (NIR) light-curve templates for fundamental (FU, J, H, KS) and first overtone (FO, J) classical Cepheids. The new templates together with period-luminosity and period-Wesenheit (PW) relations provide Cepheid distances from single-epoch observations with a precision

  8. Tailoring the porosity of hierarchical zeolites by carbon-templating

    DEFF Research Database (Denmark)

    Zhu, Kake; Egeblad, Kresten; Christensen, Claus H.

    2008-01-01

    We report the synthesis and characterization of a series of hierarchical porous zeolite single crystal materials with a range of porosities made available by carbon-templating using differently-sized carbon particles as templates for the additional non-micropore porosity. The materials were...

  9. Proline-catalysed asymmetric ketol cyclizations: The template ...

    Indian Academy of Sciences (India)

    Unknown

    Abstract. A modified template mechanism based on modelling studies of energy minimised complexes is presented for the asymmetric proline-catalysed cyclization of triketones 1, 2 and 3 to the 2S,3S-ketols. 1a, 2a and 3a respectively. The template model involves a three-point contact as favoured in enzyme– substrate ...

  10. Proline-catalysed asymmetric ketol cyclizations: The template ...

    Indian Academy of Sciences (India)

    A modified template mechanism based on modelling studies of energy minimised complexes is presented for the asymmetric proline-catalysed cyclization of triketones 1, 2 and 3 to the 2, 3-ketols 1a, 2a and 3a respectively. The template model involves a three-point contact as favoured in enzyme-substrate interactions.

  11. Design of a process template for amine synthesis

    DEFF Research Database (Denmark)

    Singh, Ravendra; Godfrey, Andy; Gregertsen, Björn

    A conceptual nitro reduction process template that should be generic such that it can handle a series of substrates with sim ilar molecular functionality has been designed. The reduction process is based on a continuo us plug-flow slurry reactor. The process template aims at speeding up the proce...

  12. Regional Innovation Clusters

    Data.gov (United States)

    Small Business Administration — The Regional Innovation Clusters serve a diverse group of sectors and geographies. Three of the initial pilot clusters, termed Advanced Defense Technology clusters,...

  13. A series of template plasmids for Escherichia coli genome engineering.

    Science.gov (United States)

    Deb, Shalini S; Reshamwala, Shamlan M S; Lali, Arvind M

    2016-06-01

    Metabolic engineering strategies often employ multi-copy episomal vectors to overexpress genes. However, chromosome-based overexpression is preferred as it avoids the use of selective pressure and reduces metabolic burden on the cell. We have constructed a series of template plasmids for λ Red-mediated Escherichia coli genome engineering. The template plasmids allow construction of genome integrating cassettes that can be used to integrate single copies of DNA sequences at predetermined sites or replace promoter regions. The constructed cassettes provide flexibility in terms of expression levels achieved and antibiotics used for selection, as well as allowing construction of marker-free strains. The modular design of the template plasmids allows replacement of genetic parts to construct new templates. Gene integration and promoter replacement using the template plasmids are illustrated. Copyright © 2016 Elsevier B.V. All rights reserved.

  14. Semiconductor nanowires and templates for electronic applications

    Energy Technology Data Exchange (ETDEWEB)

    Ying, Xiang

    2009-07-15

    This thesis starts by developing a platform for the organized growth of nanowires directly on a planar substrate. For this, a method to fabricate horizontal porous alumina membranes is studied. The second part of the thesis focuses on the study of nanowires. It starts by the understanding of the growth mechanisms of germanium nanowires and follows by the structural and electrical properties at the single nanowire level. Horizontally aligned porous anodic alumina (PAA) was used as a template for the nanowire synthesis. Three PAA arrangements were studied: - high density membranes - micron-sized fingers - multi-contacts Membranes formed by a high density of nanopores were obtained by anodizing aluminum thin films. Metallic and semiconducting nanowires were synthesized into the PAA structures via DC deposition, pulsed electro-depostion and CVD growth. The presence of gold, copper, indium, nickel, tellurium, and silicon nanowires inside PAA templates was verified by SEM and EDX analysis. Further, room-temperature transport measurements showed that the pores are completely filled till the bottom of the pores. In this dissertation, single crystalline and core-shell germanium nanowires are synthesized using indium and bismuth as catalyst in a chemical vapor deposition procedure with germane (GeH{sub 4}) as growth precursor. A systematic growth study has been performed to obtain high aspect-ratio germanium nanowires. The influence of the growth conditions on the final morphology and the crystalline structure has been determined via scanning electron microscopy (SEM) and high-resolution transmission electron microscopy (HRTEM). In the case of indium catalyzed germanium nanowires, two different structures were identified: single crystalline and crystalline core-amorphous shell. The preferential growth axis of both kinds of nanowires is along the [110] direction. The occurrence of the two morphologies was found to only depend on the nanowire dimension. In the case of bismuth

  15. YBCO nanowires grown by the alumina template method

    Energy Technology Data Exchange (ETDEWEB)

    Koblischka, Michael R.; Hartmann, Uwe [Experimental Physics, Saarland University, Campus C 6 3, D-66123 Saarbruecken (Germany); Koblischka-Veneva, Anjela [Functional Materials, Saarland University, Campus C 6 3, D-66123 Saarbruecken (Germany); Skumryev, Vassil [Institut Catala de Recerca i Estudis Avancats (ICREA), Barcelona (Spain)

    2010-07-01

    YBa{sub 2}Cu{sub 3}O{sub x} (YBCO) nanowires are grown by the anodized alumina template method, starting from pre-sintered YBCO powder. As templates, we have employed commercially available alumina templates with pore diameters of 30 nm and 100 nm, and an overall thickness of 50 {mu}m. An oxygen annealing step is required to obtain superconducting nanowires. Superconductivity with a transition temperature of 88 K is confirmed by means of magnetic susceptibility measurements. The resulting nanowires are analyzed in detail employing electron microscopy and atomic force microscopy. The separation of the nanowires of the templates is not yet established, but individual nanowires of up to 10 {mu}m length could be separated from the template. In several cases, the template pores are not completely filled by the superconducting material, which implies that the observed length is similar to what could be expected from regular grain growth. Resistance measurements using cut pieces of the filled templates were carried out as a function of temperature. These pieces were covered with Au films on top and bottom in order to provide the electric contacts. The measurements confirmed the magnetically determined critical temperatures.

  16. Radiographic templating of total hip arthroplasty for femoral neck fractures.

    Science.gov (United States)

    Lakstein, Dror; Bachar, Ira; Debi, Ronen; Lubovsky, Omri; Cohen, Ornit; Tan, Zachary; Atoun, Ehud

    2017-04-01

    The purpose of this study was to evaluate the use of pre-operative digital templating to minimize complications including limb length discrepancy (LLD), intraoperative fractures and early dislocations in patients with intracapsular femoral neck fractures. We retrospectively compared 23 patients undergoing total hip arthroplasty (THA) for intracapsular femoral fractures with pre-operative digital templating and 48 patients without templating. The mean post-operative LLD was significantly lower in patients who had pre-operative templating than in the control group (6.7 vs. 11.5 mm, p = 0.023). Only three patients (13 %) with templating had LLD greater than 1.5 cm, compared to the 15 patients (31 %) without templating (p = 0.17). In eight cases the final femoral stem size matched the templated size, while 19 patients were within two size increments. Complications included one dislocation and one intra-operative fracture in the control group. The present study demonstrated that careful pre-operative planning may reduce LLD in patients undergoing THA due to intracapsular hip fractures.

  17. Template-assisted fabrication of protein nanocapsules

    Science.gov (United States)

    Dougherty, Shelley A.; Liang, Jianyu; Kowalik, Timothy F.

    2009-02-01

    Bionanomaterials have recently begun to spark a great amount of interest and could potentially revolutionize biomedical research. Nanoparticles, nanocapsules, and nanotubular structures are becoming attractive options in drug and gene delivery. The size of the delivery vehicles greatly impacts cellular uptake and makes it highly desirable to precisely control the diameter and length of nanocarriers to make uniform nanoparticles at low cost. Carbon nanotubes have shown great potential within the field of drug and gene delivery. However, their insolubility and cytotoxicity could severely delay FDA approval. A desirable alternative would be to fabricate nanostructures from biomaterials such as proteins, peptides, or liposomes, which are already FDA approved. In this article we demonstrate the preparation of protein nanocapsules with both ends sealed using a template-assisted alternate immersion method combined with controlled cleaving. Glucose oxidase nanocapsules with controllable diameter, wall thickness, and length were fabricated and characterized with SEM and TEM. The biochemical activity of glucose oxidase in the form of nanocapsules after processing was confirmed using UV spectrometry. Our future work will explore proteins suitable for drug encapsulation and cellular uptake and will focus on optimizing the cleaving process to gain precise control over the length of the nanocapsules.

  18. Open Cell Aerogel Foams via Emulsion Templating.

    Science.gov (United States)

    Teo, Nicholas; Jana, Sadhan C

    2017-10-26

    The water-in-oil emulsion-templating method is used in this work for fabrication of open cell aerogel foams from syndiotactic polystyrene (sPS). A surfactant-stabilized emulsion is prepared at 60-100 °C by dispersing water in a solution of sPS in toluene. sPS gel, formed upon cooling of the emulsion to room temperature, locks the water droplets inside the gel. The gel is solvent exchanged in ethanol and then dried under supercritical condition of carbon dioxide to yield the aerogel foams. The aerogel foams show a significant fraction of macropores with a diameter of a few tens of micrometers, defined as macrovoids that originated from the emulsified water droplets. In conjunction, customary macropores of diameter 50-200 nm are derived from sPS gels. The macrovoids add additional openness to the aerogel structures. This paper evaluates the structural characteristics of the macrovoids, such as diameter distribution, macrovoid interconnect density, and skin layer density, in conjunction with the final aerogel foam properties.

  19. Convex Lens-Induced Nanoscale Templating

    Science.gov (United States)

    Berard, Daniel; Michaud, Francois; McFaul, Christopher; Mahsid, Sara; Reisner, Walter; Leslie, Sabrina

    2014-03-01

    We demonstrate a new platform, ``Convex Lens-Induced Nanoscale Templating'' (CLINT), for dynamic manipulation and trapping of single DNA molecules. In the CLINT technique, the curved surface of a convex lens is used to deform a flexible coverslip above a substrate containing embedded nanotopography, creating a nanoscale gap that can be adjusted during an experiment to confine molecules within the embedded nanostructures. Critically, CLINT has the capability of actively transforming a macroscale flow-cell into a nanofluidic device without need for high-temperature direct bonding, leading to ease of sample loading and greater accessibility of the surface. Moreover, as DNA molecules present in the gap will be driven into the embedded topography from above, CLINT eliminates the need for the high pressures or electric fields necessitated by direct bonded nanofluidic devices for loading DNA in the confined structures. To demonstrate the versatility of CLINT, we confine DNA to nanogroove structures, demonstrating DNA nanochannel-based stretching. Using ionic strengths that are in line with typical biological buffers, we have successfully extended DNA in sub 30nm nanochannels, achieving high stretching (90%) that is in good agreement with Odijk deflection theory.

  20. Templated Chemically Deposited Semiconductor Optical Fiber Materials

    Science.gov (United States)

    Sparks, Justin R.; Sazio, Pier J. A.; Gopalan, Venkatraman; Badding, John V.

    2013-07-01

    Chemical deposition is a powerful technology for fabrication of planar microelectronics. Optical fibers are the dominant platform for telecommunications, and devices such as fiber lasers are forming the basis for new industries. High-pressure chemical vapor deposition (HPCVD) allows for conformal layers and void-free wires of precisely doped crystalline unary and compound semiconductors inside the micro-to-nanoscale-diameter pores of microstructured optical fibers (MOFs). Drawing the fibers to serve as templates into which these semiconductor structures can be fabricated allows for geometric design flexibility that is difficult to achieve with planar fabrication. Seamless coupling of semiconductor optoelectronic and photonic devices with existing fiber infrastructure thus becomes possible, facilitating all-fiber technological approaches. The deposition techniques also allow for a wider range of semiconductor materials compositions to be exploited than is possible by means of preform drawing. Gigahertz bandwidth junction-based fiber devices can be fabricated from doped crystalline semiconductors, for example. Deposition of amorphous hydrogenated silicon, which cannot be drawn, allows for the exploitation of strong nonlinear optical function in fibers. Finally, crystalline compound semiconductor fiber cores hold promise for high-power infrared light-guiding fiber devices and subwavelength-resolution, large-area infrared imaging.

  1. Macroporous inorganic solids from a biomineral template

    Science.gov (United States)

    Yue, Wenbo; Park, Robert J.; Kulak, Alex N.; Meldrum, Fiona C.

    2006-08-01

    A range of macroporous inorganic solids, with unique, sponge-like structures were synthesised by templating sea urchin skeletal plates. Although composed of a single crystal of calcite, a sea urchin plate exhibits a bicontinuous morphology with pores of diameter 10-15 μm. As both the solid and porous fractions of the plate exhibit identical form and dimensions, filling the porous network with an alternative material and dissolving away the CaCO 3 generates a cast with identical morphology to the original plate. The versatility of this approach is demonstrated in this paper, which provides both a review of previously published work, and a description of the application to a number of new systems. Macroporous metals, including gold and nickel were synthesised either from pre-prepared particles or via electroless deposition, while silica and titania were generated by sol-gel techniques. Sponge-like polymer membranes, formed as casts of the sea urchin plates, were also used as an environment in which to precipitate a range of single crystals with complex morphologies: CaCO 3, SrSO 4, PbSO 4, PbCO 3, NaCl and CuSO 4·5H 2O. These experiments demonstrate that single crystals with intricate forms are not restricted to the realms of biology, but that shape constraint provides an extremely general route for morphological control.

  2. Iris-based authentication system with template protection and renewability

    Science.gov (United States)

    Ercole, Chiara; Campisi, Patrizio; Neri, Alessandro

    2007-10-01

    Biometrics is the most emerging technology for automatic people authentication, nevertheless severe concerns raised about security of such systems and users' privacy. In case of malicious attacks toward one or more components of the authentication system, stolen biometric features cannot be replaced. This paper focuses on securing the enrollment database and the communication channel between such database and the matcher. In particular, a method is developed to protect the stored biometric templates, adapting the fuzzy commitment scheme to iris biometrics by exploiting error correction codes tailored on template discriminability. The aforementioned method allows template renewability applied to iris based authentication and guarantees high security performing the match in the encrypted domain.

  3. A proposal for a drug information database and text templates for generating package inserts

    Directory of Open Access Journals (Sweden)

    Okuya R

    2013-07-01

    Full Text Available Ryo Okuya,1 Masaomi Kimura,2 Michiko Ohkura,2 Fumito Tsuchiya3 1Graduate School of Engineering and Science, 2Faculty of Engineering, Shibaura Institute of Technology, Tokyo, 3School of Pharmacy, International University of Health and Welfare, Tokyo, Japan Abstract: To prevent prescription errors caused by information systems, a database to store complete and accurate drug information in a user-friendly format is needed. In previous studies, the primary method for obtaining data stored in a database is to extract drug information from package inserts by employing pattern matching or more sophisticated methods such as text mining. However, it is difficult to obtain a complete database because there is no strict rule concerning expressions used to describe drug information in package inserts. The authors' strategy was to first build a database and then automatically generate package inserts by embedding data in the database using templates. To create this database, the support of pharmaceutical companies to input accurate data is required. It is expected that this system will work, because these companies can earn merit for newly developed drugs to decrease the effort to create package inserts from scratch. This study designed the table schemata for the database and text templates to generate the package inserts. To handle the variety of drug-specific information in the package inserts, this information in drug composition descriptions was replaced with labels and the replacement descriptions utilizing cluster analysis were analyzed. To improve the method by which frequently repeated ingredient information and/or supplementary information are stored, the method was modified by introducing repeat tags in the templates to indicate repetition and improving the insertion of data into the database. The validity of this method was confirmed by inputting the drug information described in existing package inserts and checking that the method could

  4. The biogeochemical cycle of the adsorbed template. I - formation of the template

    Science.gov (United States)

    Lazard, Daniel; Lahav, Noam; Orenberg, J. B.

    1987-01-01

    Experimental results are presented for the verification of the first adsorption step of the 'adsorbed template' biogeochemical cycle, a simple model for a primitive prebiotic replication system. The adsorption of Poly-C, Poly-U, Poly-A, Poly-G, and 5'-AMP, 5'-GMP, 5'-CMP and 5'-UMP onto gypsum was studied. It was found that under the conditions of the experiment, the polymers have a very high affinity for the mineral surface, while the monomers adsorb much less efficiently.

  5. Biomimetic self-assembly of apatite hybrid materials: from a single molecular template to bi-/multi-molecular templates.

    Science.gov (United States)

    Ma, Jun; Wang, Jianglin; Ai, Xin; Zhang, Shengmin

    2014-01-01

    The self-assembly of apatite and proteins is a critical process to induce the formation of the bones and teeth in vertebrates. Although hierarchical structures and biomineralization mechanisms of the mineralized tissues have been intensively studied, most researches focus on the self-assembly biomimetic route using one single-molecular template, while the natural bone is an outcome of a multi-molecular template co-assembly process. Inspired by such a mechanism in nature, a novel strategy based on multi-molecular template co-assembly for fabricating bone-like hybrid materials was firstly proposed by the authors. In this review article we have summarized the new trends from single-molecular template to bi-/multi-molecular template systems in biomimetic fabrication of apatite hybrid materials. So far, many novel apatite hybrid materials with controlled morphologies and hierarchical structures have been successfully achieved using bi-/multi-molecular template strategy, and are found to have multiple common features in comparison with natural mineralized tissues. The carboxyl, carbonyl and amino groups of the template molecules are identified to initiate the nucleation of calcium phosphate during the assembling process. For bi-/multi-molecular templates, the incorporation of multiple promotion sites for calcium and phosphate ions precisely enables to regulate the apatite nucleation from the early stage. The roles of acidic molecules and the synergetic effects of protein templates have been significantly recognized in recent studies. In addition, a specific attention is paid to self-assembling of apatite nanoparticles into ordered structures on tissue regenerative scaffolds due to their promising clinical applications ranging from implant grafts, coatings to drug and gene delivery. Copyright © 2013 Elsevier Inc. All rights reserved.

  6. Improving your target-template alignment with MODalign.

    KAUST Repository

    Barbato, Alessandro

    2012-02-04

    SUMMARY: MODalign is an interactive web-based tool aimed at helping protein structure modelers to inspect and manually modify the alignment between the sequences of a target protein and of its template(s). It interactively computes, displays and, upon modification of the target-template alignment, updates the multiple sequence alignments of the two protein families, their conservation score, secondary structure and solvent accessibility values, and local quality scores of the implied three-dimensional model(s). Although it has been designed to simplify the target-template alignment step in modeling, it is suitable for all cases where a sequence alignment needs to be inspected in the context of other biological information. AVAILABILITY AND IMPLEMENTATION: Freely available on the web at http://modorama.biocomputing.it/modalign. Website implemented in HTML and JavaScript with all major browsers supported. CONTACT: jan.kosinski@uniroma1.it.

  7. Template-Framework Interactions in Tetraethylammonium-Directed Zeolite Synthesis

    NARCIS (Netherlands)

    Schmidt, Joel E.; Fu, Donglong; Deem, Michael W.; Weckhuysen, Bert M.

    2016-01-01

    Zeolites, having widespread applications in chemical industries, are often synthesized using organic templates. These can be cost-prohibitive, motivating investigations into their role in promoting crystallization. Herein, the relationship between framework structure, chemical composition, synthesis

  8. CT Study of Radiopaque Implant Template for Gingival Form

    National Research Council Canada - National Science Library

    Tsutsumi, Toyoshige

    2012-01-01

    .... The concentrations of barium sulfate were 0, 5, 10, 15, 20, 25 vol%. The CT template were replaced the porcine mandibule and was fixed by immersion in a water vessel using a phantom before cone beam CT examination...

  9. Ground Water Rule - Boil Water Advisory - Public Notification Template

    Science.gov (United States)

    The Ground Water Rule - Boil Water Advisory - Public Notification Template can be use to issue a Tier 1 Public Notification when it has been determined that source ground water is contaminated with E. Coli bacteria.

  10. GPP Webinar: Solar Procurement Templates and Tools for Higher Education

    Science.gov (United States)

    Green Power Partnership webinar on solar procurement for Higher Education which features various tools and templates that schools can use to shape and manage the solar procurement process to a successful outcome.

  11. Dental rehabilitation of amelogenesis imperfecta using thermoformed templates

    Directory of Open Access Journals (Sweden)

    SNMP Sockalingam

    2011-01-01

    Full Text Available Amelogenesis imperfecta represents a group of dental developmental conditions that are genomic in origin. Hypoplastic AI, hypomineralised AI or both in combination were the most common types seen clinically. This paper describes oral rehabilitation of a 9-year-old Malay girl with inherited hypoplastic AI using transparent thermoforming templates. The defective surface areas were reconstructed to their original dimensions on stone cast models of the upper and lower arches using composite, and transparent thermoform templates were fabricated on the models. The templates were used as crown formers to reconstruct the defective teeth clinically using esthetically matching composite. The usage of the templates allowed direct light curing of the composite, accurate reproducibility of the anatomic contours of the defective teeth, reduced chair-side time and easy contouring and placement of homogenous thickness of composite in otherwise inaccessible sites of the affected teeth.

  12. Template matching techniques in computer vision theory and practice

    CERN Document Server

    Brunelli, Roberto

    2009-01-01

    The detection and recognition of objects in images is a key research topic in the computer vision community.  Within this area, face recognition and interpretation has attracted increasing attention owing to the possibility of unveiling human perception mechanisms, and for the development of practical biometric systems. This book and the accompanying website, focus on template matching, a subset of object recognition techniques of wide applicability, which has proved to be particularly effective for face recognition applications. Using examples from face processing tasks throughout the book to illustrate more general object recognition approaches, Roberto Brunelli: examines the basics of digital image formation, highlighting points critical to the task of template matching;presents basic and  advanced template matching techniques, targeting grey-level images, shapes and point sets;discusses recent pattern classification paradigms from a template matching perspective;illustrates the development of a real fac...

  13. The Address on Umueri Airport City Project: A Template for ...

    African Journals Online (AJOL)

    ; and (3) a template that governors of other States, especially those who are obviously not performing effectively, should adopt and adapt towards efficiency and effectiveness in leadership and governance at the subnational level of Nigeria.

  14. A Survey On Various Web Template Detection And Extraction Methods

    Directory of Open Access Journals (Sweden)

    Neethu Mary Varghese

    2015-03-01

    Full Text Available Abstract In todays digital world reliance on the World Wide Web as a source of information is extensive. Users increasingly rely on web based search engines to provide accurate search results on a wide range of topics that interest them. The search engines in turn parse the vast repository of web pages searching for relevant information. However majority of web portals are designed using web templates which are designed to provide consistent look and feel to end users. The presence of these templates however can influence search results leading to inaccurate results being delivered to the users. Therefore to improve the accuracy and reliability of search results identification and removal of web templates from the actual content is essential. A wide range of approaches are commonly employed to achieve this and this paper focuses on the study of the various approaches of template detection and extraction that can be applied across homogenous as well as heterogeneous web pages.

  15. Ordered Nanomaterials Thin Films via Supported Anodized Alumina Templates

    Directory of Open Access Journals (Sweden)

    Mohammed eES-SOUNI

    2014-10-01

    Full Text Available Supported anodized alumina template films with highly ordered porosity are best suited for fabricating large area ordered nanostructures with tunable dimensions and aspect ratios. In this paper we first discuss important issues for the generation of such templates, including required properties of the Al/Ti/Au/Ti thin film heterostructure on a substrate for high quality templates. We then show examples of anisotropic nanostructure films consisting of noble metals using these templates, discuss briefly their optical properties and their applications to molecular detection using surface enhanced Raman spectroscopy. Finally we briefly address the possibility to make nanocomposite films, exemplary shown on a plasmonic-thermochromic nanocomposite of VO2-capped Au-nanorods.

  16. III - Template Metaprogramming for massively parallel scientific computing - Templates for Iteration; Thread-level Parallelism

    CERN Multimedia

    CERN. Geneva

    2016-01-01

    Large scale scientific computing raises questions on different levels ranging from the fomulation of the problems to the choice of the best algorithms and their implementation for a specific platform. There are similarities in these different topics that can be exploited by modern-style C++ template metaprogramming techniques to produce readable, maintainable and generic code. Traditional low-level code tend to be fast but platform-dependent, and it obfuscates the meaning of the algorithm. On the other hand, object-oriented approach is nice to read, but may come with an inherent performance penalty. These lectures aim to present he basics of the Expression Template (ET) idiom which allows us to keep the object-oriented approach without sacrificing performance. We will in particular show to to enhance ET to include SIMD vectorization. We will then introduce techniques for abstracting iteration, and introduce thread-level parallelism for use in heavy data-centric loads. We will show to to apply these methods i...

  17. II - Template Metaprogramming for Massively Parallel Scientific Computing - Vectorization with Expression Templates

    CERN Multimedia

    CERN. Geneva

    2016-01-01

    Large scale scientific computing raises questions on different levels ranging from the fomulation of the problems to the choice of the best algorithms and their implementation for a specific platform. There are similarities in these different topics that can be exploited by modern-style C++ template metaprogramming techniques to produce readable, maintainable and generic code. Traditional low-level code tend to be fast but platform-dependent, and it obfuscates the meaning of the algorithm. On the other hand, object-oriented approach is nice to read, but may come with an inherent performance penalty. These lectures aim to present he basics of the Expression Template (ET) idiom which allows us to keep the object-oriented approach without sacrificing performance. We will in particular show to to enhance ET to include SIMD vectorization. We will then introduce techniques for abstracting iteration, and introduce thread-level parallelism for use in heavy data-centric loads. We will show to to apply these methods i...

  18. Acquiring Common Sense Spatial Knowledge through Implicit Spatial Templates

    OpenAIRE

    Collell, Guillem; Van Gool, Luc; Moens, Marie-Francine

    2017-01-01

    Spatial understanding is a fundamental problem with wide-reaching real-world applications. The representation of spatial knowledge is often modeled with spatial templates, i.e., regions of acceptability of two objects under an explicit spatial relationship (e.g., "on", "below", etc.). In contrast with prior work that restricts spatial templates to explicit spatial prepositions (e.g., "glass on table"), here we extend this concept to implicit spatial language, i.e., those relationships (genera...

  19. A competition-based deformable template for junction extraction

    OpenAIRE

    Cazorla Quevedo, Miguel Ángel; Escolano Ruiz, Francisco; Gallardo López, Domingo; Colomina Pardo, Otto

    1999-01-01

    We propose a deformable template for junction extraction. Our method evolves from the Kona approach. Junction detection is performed in two steps: center detection and wedge extraction. In the first stage, a local filter is used to detect candidates. Then a template deformation method is used to find the optimal number of sections. Comunicación presentada en el VIII Simposium Nacional de Reconocimiento de Formas y Análisis de Imágenes, Bilbao, mayo 1999.

  20. Template directed synthesis of highly organized functional biomimetic silica nanostructures

    OpenAIRE

    Kind, Lucy

    2009-01-01

    Silica is an important mineral in technological and biological applications. Many protocols have been developed for the synthesis of complex silica architectures. Most prominent is the silicification approach, where polymers build up the templates for the revealed polymer/silica structures. The current thesis demonstrates that star-shaped polymers and block copolymers are efficient templates for the fabrication of silica particles with spherical or raspberry-like morphology....

  1. Heavy hitters via cluster-preserving clustering

    DEFF Research Database (Denmark)

    Larsen, Kasper Green; Nelson, Jelani; Nguyen, Huy L.

    2016-01-01

    , providing correctness whp. In fact, a simpler version of our algorithm for p = 1 in the strict turnstile model answers queries even faster than the "dyadic trick" by roughly a log n factor, dominating it in all regards. Our main innovation is an efficient reduction from the heavy hitters to a clustering...... problem in which each heavy hitter is encoded as some form of noisy spectral cluster in a much bigger graph, and the goal is to identify every cluster. Since every heavy hitter must be found, correctness requires that every cluster be found. We thus need a "cluster-preserving clustering" algorithm......, that partitions the graph into clusters with the promise of not destroying any original cluster. To do this we first apply standard spectral graph partitioning, and then we use some novel combinatorial techniques to modify the cuts obtained so as to make sure that the original clusters are sufficiently preserved...

  2. The Affordance Template ROS Package for Robot Task Programming

    Science.gov (United States)

    Hart, Stephen; Dinh, Paul; Hambuchen, Kimberly

    2015-01-01

    This paper introduces the Affordance Template ROS package for quickly programming, adjusting, and executing robot applications in the ROS RViz environment. This package extends the capabilities of RViz interactive markers by allowing an operator to specify multiple end-effector waypoint locations and grasp poses in object-centric coordinate frames and to adjust these waypoints in order to meet the run-time demands of the task (specifically, object scale and location). The Affordance Template package stores task specifications in a robot-agnostic XML description format such that it is trivial to apply a template to a new robot. As such, the Affordance Template package provides a robot-generic ROS tool appropriate for building semi-autonomous, manipulation-based applications. Affordance Templates were developed by the NASA-JSC DARPA Robotics Challenge (DRC) team and have since successfully been deployed on multiple platforms including the NASA Valkyrie and Robonaut 2 humanoids, the University of Texas Dreamer robot and the Willow Garage PR2. In this paper, the specification and implementation of the affordance template package is introduced and demonstrated through examples for wheel (valve) turning, pick-and-place, and drill grasping, evincing its utility and flexibility for a wide variety of robot applications.

  3. Silver nanowires-templated metal oxide for broadband Schottky photodetector

    Energy Technology Data Exchange (ETDEWEB)

    Patel, Malkeshkumar; Kim, Hong-Sik; Kim, Joondong, E-mail: joonkim@inu.ac.kr [Photoelectric and Energy Device Application Lab (PEDAL) and Department of Electrical Engineering, Incheon National University, 119 Academy Rd. Yeonsu, Incheon 406772 (Korea, Republic of); Park, Hyeong-Ho [Applied Device and Material Lab., Device Technology Division, Korea Advanced Nano Fab Center (KANC), Suwon 443270 (Korea, Republic of)

    2016-04-04

    Silver nanowires (AgNWs)-templated transparent metal oxide layer was applied for Si Schottky junction device, which remarked the record fastest photoresponse of 3.4 μs. Self-operating AgNWs-templated Schottky photodetector showed broad wavelength photodetection with high responsivity (42.4 A W{sup −1}) and detectivity (2.75 × 10{sup 15} Jones). AgNWs-templated indium-tin-oxide (ITO) showed band-to-band excitation due to the internal photoemission, resulting in significant carrier collection performances. Functional metal oxide layer was formed by AgNWs-templated from ITO structure. The grown ITO above AgNWs has a cylindrical shape and acts as a thermal protector of AgNWs for high temperature environment without any deformation. We developed thermal stable AgNWs-templated transparent oxide devices and demonstrated the working mechanism of AgNWs-templated Schottky devices. We may propose the high potential of hybrid transparent layer design for various photoelectric applications, including solar cells.

  4. Cluster headache

    Directory of Open Access Journals (Sweden)

    Ducros Anne

    2008-07-01

    Full Text Available Abstract Cluster headache (CH is a primary headache disease characterized by recurrent short-lasting attacks (15 to 180 minutes of excruciating unilateral periorbital pain accompanied by ipsilateral autonomic signs (lacrimation, nasal congestion, ptosis, miosis, lid edema, redness of the eye. It affects young adults, predominantly males. Prevalence is estimated at 0.5–1.0/1,000. CH has a circannual and circadian periodicity, attacks being clustered (hence the name in bouts that can occur during specific months of the year. Alcohol is the only dietary trigger of CH, strong odors (mainly solvents and cigarette smoke and napping may also trigger CH attacks. During bouts, attacks may happen at precise hours, especially during the night. During the attacks, patients tend to be restless. CH may be episodic or chronic, depending on the presence of remission periods. CH is associated with trigeminovascular activation and neuroendocrine and vegetative disturbances, however, the precise cautive mechanisms remain unknown. Involvement of the hypothalamus (a structure regulating endocrine function and sleep-wake rhythms has been confirmed, explaining, at least in part, the cyclic aspects of CH. The disease is familial in about 10% of cases. Genetic factors play a role in CH susceptibility, and a causative role has been suggested for the hypocretin receptor gene. Diagnosis is clinical. Differential diagnoses include other primary headache diseases such as migraine, paroxysmal hemicrania and SUNCT syndrome. At present, there is no curative treatment. There are efficient treatments to shorten the painful attacks (acute treatments and to reduce the number of daily attacks (prophylactic treatments. Acute treatment is based on subcutaneous administration of sumatriptan and high-flow oxygen. Verapamil, lithium, methysergide, prednisone, greater occipital nerve blocks and topiramate may be used for prophylaxis. In refractory cases, deep-brain stimulation of the

  5. Detection of Cancerous Masses in Mammograms by Template Matching: Optimization of Template Brightness Distribution by Means of Evolutionary Algorithm

    National Research Council Canada - National Science Library

    Bator, Marcin; Nieniewski, Mariusz

    2012-01-01

    .... This optimization is performed by the evolutionary algorithm using an auxiliary mass classifier. Brightness along the radius of the circularly symmetric template is coded indirectly by its second derivative...

  6. Massive integration of diverse protein quality assessment methods to improve template based modeling in CASP11.

    Science.gov (United States)

    Cao, Renzhi; Bhattacharya, Debswapna; Adhikari, Badri; Li, Jilong; Cheng, Jianlin

    2016-09-01

    Model evaluation and selection is an important step and a big challenge in template-based protein structure prediction. Individual model quality assessment methods designed for recognizing some specific properties of protein structures often fail to consistently select good models from a model pool because of their limitations. Therefore, combining multiple complimentary quality assessment methods is useful for improving model ranking and consequently tertiary structure prediction. Here, we report the performance and analysis of our human tertiary structure predictor (MULTICOM) based on the massive integration of 14 diverse complementary quality assessment methods that was successfully benchmarked in the 11th Critical Assessment of Techniques of Protein Structure prediction (CASP11). The predictions of MULTICOM for 39 template-based domains were rigorously assessed by six scoring metrics covering global topology of Cα trace, local all-atom fitness, side chain quality, and physical reasonableness of the model. The results show that the massive integration of complementary, diverse single-model and multi-model quality assessment methods can effectively leverage the strength of single-model methods in distinguishing quality variation among similar good models and the advantage of multi-model quality assessment methods of identifying reasonable average-quality models. The overall excellent performance of the MULTICOM predictor demonstrates that integrating a large number of model quality assessment methods in conjunction with model clustering is a useful approach to improve the accuracy, diversity, and consequently robustness of template-based protein structure prediction. Proteins 2016; 84(Suppl 1):247-259. © 2015 Wiley Periodicals, Inc. © 2015 Wiley Periodicals, Inc.

  7. Sodium cholate-templated blue light-emitting Ag subnanoclusters: in vivo toxicity and imaging in zebrafish embryos.

    Science.gov (United States)

    Chandirasekar, Shanmugam; Chandrasekaran, Chandramouli; Muthukumarasamyvel, Thangavel; Sudhandiran, Ganapasam; Rajendiran, Nagappan

    2015-01-28

    We report a novel green chemical approach for the synthesis of blue light-emitting and water-soluble Ag subnanoclusters, using sodium cholate (NaC) as a template at a concentration higher than the critical micelle concentration (CMC) at room temperature. However, under photochemical irradiation, small anisotropic and spherically shaped Ag nanoparticles (3-11 nm) were obtained upon changing the concentration of NaC from below to above the CMC. The matrix-assisted laser desorption ionization time-of-flight and electrospray ionization mass spectra showed that the cluster sample was composed of Ag4 and Ag6. The optical properties of the clusters were studied by UV-visible and luminescence spectroscopy. The lifetime of the synthesized fluorescent Ag nanoclusters (AgNCs) was measured using a time-correlated single-photon counting technique. High-resolution transmission electron microscopy was used to assess the size of clusters and nanoparticles. A protocol for transferring nanoclusters to organic solvents is also described. Toxicity and bioimaging studies of NaC templated AgNCs were conducted using developmental stage zebrafish embryos. From the survival and hatching experiment, no significant toxic effect was observed at AgNC concentrations of up to 200 μL/mL, and the NC-stained embryos exhibited blue fluorescence with high intensity for a long period of time, which shows that AgNCs are more stable in living system.

  8. Transformation of thiolated chitosan-templated gold nanoparticles to huge microcubes

    Energy Technology Data Exchange (ETDEWEB)

    Sun, Yudie [School of Chemistry and Materials Science, University of Science and Technology of China, Hefei 230026 (China); Institute of Intelligent Machines, Chinese Academy of Sciences, Hefei 230031 (China); Liu, Honglin, E-mail: hlliu@iim.ac.cn [Institute of Intelligent Machines, Chinese Academy of Sciences, Hefei 230031 (China); Yang, Liangbao, E-mail: lbyang@iim.ac.cn [Institute of Intelligent Machines, Chinese Academy of Sciences, Hefei 230031 (China); Sun, Bai; Liu, Jinhuai [Institute of Intelligent Machines, Chinese Academy of Sciences, Hefei 230031 (China)

    2014-05-01

    Graphical abstract: - Highlights: • Mercapto groups were grafted to chitosan molecule by a reactive amine reduction. • Functional polymer with well-defined monomer units controls AuNPs assembly. • Assembled morphologies depend on the ratio of AuNPs to thiolate groups. • Microcubes with side length of ∼20 μm was synthesized through a dialysis step. • A edge-to-middle growth mechanism of gold microcubes was observed. - Abstract: The L-cysteine molecules were successfully grafted to the 2-amino group of chitosan by a reactive amine reduction, and the as-synthesized thiolated chitosan (TC) molecules were used as the templates to direct the self-assembly of gold nanoparticles and induce the transformation of these assemblies to gold microcubes through a deep-going dialysis. We found that the ratio of gold nanoparticles to TC molecules could greatly affect the shape of the assembled clusters. Different stages of these clusters and microstructures during the dialysis process were characterized by scanning electron microscope (SEM), and the microcubes with average side length of about 20 μm were successfully synthesized. According to the morphology evolution of the assembly, it could be concluded that the microcubes were formed from external to internal. The SERS area mapping images of microcubes and some clusters were also collected to study the formation mechanism of gold microcubes. Our work demonstrates a simple and highly effective way to assemble gold nanoparticles into microcubes with unique properties.

  9. Templating growth of gold nanostructures with a CdSe quantum dot array

    Science.gov (United States)

    Paul, Neelima; Metwalli, Ezzeldin; Yao, Yuan; Schwartzkopf, Matthias; Yu, Shun; Roth, Stephan V.; Müller-Buschbaum, Peter; Paul, Amitesh

    2015-05-01

    In optoelectronic devices based on quantum dot arrays, thin nanolayers of gold are preferred as stable metal contacts and for connecting recombination centers. The optimal morphology requirements are uniform arrays with precisely controlled positions and sizes over a large area with long range ordering since this strongly affects device performance. To understand the development of gold layer nanomorphology, the detailed mechanism of structure formation are probed with time-resolved grazing incidence small-angle X-ray scattering (GISAXS) during gold sputter deposition. Gold is sputtered on a CdSe quantum dot array with a characteristic quantum dot spacing of ~7 nm. In the initial stages of gold nanostructure growth, a preferential deposition of gold on top of quantum dots occurs. Thus, the quantum dots act as nucleation sites for gold growth. In later stages, the gold nanoparticles surrounding the quantum dots undergo a coarsening to form a complete layer comprised of gold-dot clusters. Next, growth proceeds dominantly via vertical growth of gold on these gold-dot clusters to form an gold capping layer. In this capping layer, a shift of the cluster boundaries due to ripening is found. Thus, a templating of gold on a CdSe quantum dot array is feasible at low gold coverage.

  10. Application of Template Matching for Improving Classification of Urban Railroad Point Clouds.

    Science.gov (United States)

    Arastounia, Mostafa; Oude Elberink, Sander

    2016-12-12

    This study develops an integrated data-driven and model-driven approach (template matching) that clusters the urban railroad point clouds into three classes of rail track, contact cable, and catenary cable. The employed dataset covers 630 m of the Dutch urban railroad corridors in which there are four rail tracks, two contact cables, and two catenary cables. The dataset includes only geometrical information (three dimensional (3D) coordinates of the points) with no intensity data and no RGB data. The obtained results indicate that all objects of interest are successfully classified at the object level with no false positives and no false negatives. The results also show that an average 97.3% precision and an average 97.7% accuracy at the point cloud level are achieved. The high precision and high accuracy of the rail track classification (both greater than 96%) at the point cloud level stems from the great impact of the employed template matching method on excluding the false positives. The cables also achieve quite high average precision (96.8%) and accuracy (98.4%) due to their high sampling and isolated position in the railroad corridor.

  11. Application of Template Matching for Improving Classification of Urban Railroad Point Clouds

    Directory of Open Access Journals (Sweden)

    Mostafa Arastounia

    2016-12-01

    Full Text Available This study develops an integrated data-driven and model-driven approach (template matching that clusters the urban railroad point clouds into three classes of rail track, contact cable, and catenary cable. The employed dataset covers 630 m of the Dutch urban railroad corridors in which there are four rail tracks, two contact cables, and two catenary cables. The dataset includes only geometrical information (three dimensional (3D coordinates of the points with no intensity data and no RGB data. The obtained results indicate that all objects of interest are successfully classified at the object level with no false positives and no false negatives. The results also show that an average 97.3% precision and an average 97.7% accuracy at the point cloud level are achieved. The high precision and high accuracy of the rail track classification (both greater than 96% at the point cloud level stems from the great impact of the employed template matching method on excluding the false positives. The cables also achieve quite high average precision (96.8% and accuracy (98.4% due to their high sampling and isolated position in the railroad corridor.

  12. Ultra-flat bismuth films for diamagnetic levitation by template-stripping

    Energy Technology Data Exchange (ETDEWEB)

    Kokorian, J. [University of Twente, P.O. Box 217, 7500 AE Enschede (Netherlands); TU Delft — 3mE-PME, Mekelweg 2, 2628 CD Delft (Netherlands); Engelen, J.B.C. [University of Twente, P.O. Box 217, 7500 AE Enschede (Netherlands); IBM Research — Zurich, Säumerstrasse 4, CH-8803 Rüschlikon (Switzerland); Vries, J. de; Nazeer, H.; Woldering, L.A. [University of Twente, P.O. Box 217, 7500 AE Enschede (Netherlands); Abelmann, L., E-mail: l.abelmann@utwente.nl [University of Twente, P.O. Box 217, 7500 AE Enschede (Netherlands)

    2014-01-01

    In this paper we present a method to deposit thin films of bismuth with sub-nanometer surface roughness for application to diamagnetic levitation. Evaporated films of bismuth have a high surface roughness with peak to peak values in excess of 100 nm and average values on the order of 20 nm. We expose the smooth backside of the films using a template stripping method, resulting in a great reduction of the average surface roughness, to 0.8 nm. Atomic force microscope and X-ray diffraction measurements show that the films have a polycrystalline texture with preferential c-axis orientation. On the back side of the film, fine grains are grouped into larger clusters. Cantilever resonance shift measurements indicate that the Young's modulus of the films is on the order of 20 GPa. - Highlights: • We deposited continuous but rough bismuth films of 200–500 nm in thickness by thermal evaporation. • We analyzed the material properties of bismuth films using a variety of measurement techniques. • We reduced the roughness of bismuth films from 20 nm to 0.8 nm by a template stripping method. • The Young's modulus of bismuth thin films is comparable to bulk bismuth.

  13. DNA/RNA Detection Using DNA-Templated Few-Atom Silver Nanoclusters

    Directory of Open Access Journals (Sweden)

    Hsin-Chih Yeh

    2013-04-01

    Full Text Available DNA-templated few-atom silver nanoclusters (DNA/Ag NCs are a new class of organic/inorganic composite nanomaterials whose fluorescence emission can be tuned throughout the visible and near-IR range by simply programming the template sequences. Compared to organic dyes, DNA/Ag NCs can be brighter and more photostable. Compared to quantum dots, DNA/Ag NCs are smaller, less prone to blinking on long timescales, and do not have a toxic core. The preparation of DNA/Ag NCs is simple and there is no need to remove excess precursors as these precursors are non-fluorescent. Our recent discovery of the fluorogenic and color switching properties of DNA/Ag NCs have led to the invention of new molecular probes, termed NanoCluster Beacons (NCBs, for DNA detection, with the capability to differentiate single-nucleotide polymorphisms by emission colors. NCBs are inexpensive, easy to prepare, and compatible with commercial DNA synthesizers. Many other groups have also explored and taken advantage of the environment sensitivities of DNA/Ag NCs in creating new tools for DNA/RNA detection and single-nucleotide polymorphism identification. In this review, we summarize the recent trends in the use of DNA/Ag NCs for developing DNA/RNA sensors.

  14. Facile synthesis of cobalt ferrite nanotubes using bacterial nanocellulose as template.

    Science.gov (United States)

    Menchaca-Nal, S; Londoño-Calderón, C L; Cerrutti, P; Foresti, M L; Pampillo, L; Bilovol, V; Candal, R; Martínez-García, R

    2016-02-10

    A facile method for the preparation of cobalt ferrite nanotubes by use of bacterial cellulose nanoribbons as a template is described. The proposed method relays on a simple coprecipitation operation, which is a technique extensively used for the synthesis of nanoparticles (either isolated or as aggregates) but not for the synthesis of nanotubes. The precursors employed in the synthesis are chlorides, and the procedure is carried out at low temperature (90 °C). By the method proposed a homogeneous distribution of cobalt ferrite nanotubes with an average diameter of 217 nm in the bacterial nanocellulose (BC) aerogel (3%) was obtained. The obtained nanotubes are formed by 26-102 nm cobalt ferrite clusters of cobalt ferrite nanoparticles with diameters in the 9-13 nm interval. The nanoparticles that form the nanotubes showed to have a certain crystalline disorder, which could be attributed in a greater extent to the small crystallite size, and, in a lesser extent, to microstrains existing in the crystalline lattice. The BC-templated-CoFe2O4 nanotubes exhibited magnetic behavior at room temperature. The magnetic properties showed to be influenced by a fraction of nanoparticles in superparamagnetic state. Copyright © 2015 Elsevier Ltd. All rights reserved.

  15. Partitional clustering algorithms

    CERN Document Server

    2015-01-01

    This book summarizes the state-of-the-art in partitional clustering. Clustering, the unsupervised classification of patterns into groups, is one of the most important tasks in exploratory data analysis. Primary goals of clustering include gaining insight into, classifying, and compressing data. Clustering has a long and rich history that spans a variety of scientific disciplines including anthropology, biology, medicine, psychology, statistics, mathematics, engineering, and computer science. As a result, numerous clustering algorithms have been proposed since the early 1950s. Among these algorithms, partitional (nonhierarchical) ones have found many applications, especially in engineering and computer science. This book provides coverage of consensus clustering, constrained clustering, large scale and/or high dimensional clustering, cluster validity, cluster visualization, and applications of clustering. Examines clustering as it applies to large and/or high-dimensional data sets commonly encountered in reali...

  16. Synthesis of Hierarchical Porous Metals Using Ionic-Liquid-Based Media as Solvent and Template.

    Science.gov (United States)

    Kang, Xinchen; Sun, Xiaofu; Ma, Xiaoxue; Zhang, Pei; Zhang, Zhanrong; Meng, Qinglei; Han, Buxing

    2017-10-02

    It was found that nanodomains existed in the ionic liquid (IL)-based ternary system containing IL 1-ethyl-3-methylimidazole tetrafluoroborate (EmimBF4 ), IL 1-decyl-3-methylimidazole nitrate (DmimNO3 ) and water, and the size distribution of the domains varied continuously with the composition of the solution. A strategy to synthesize hierarchical porous metals using IL-based media as solvent and template is proposed, and the hierarchical porous Ru and Pt metals were prepared by the assembly of metal clusters of about 1.5 nm using this new method. It is demonstrated that the metals have micropores and mesopores, and the size distribution is tuned by controlling the composition of the solution. Porous Ru was used for a series of hydrogenation reactions. It has an outstanding catalytic performance owing to its special morphology and structure. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  17. Mixture model modal clustering

    OpenAIRE

    Chacón, José E.

    2016-01-01

    The two most extended density-based approaches to clustering are surely mixture model clustering and modal clustering. In the mixture model approach, the density is represented as a mixture and clusters are associated to the different mixture components. In modal clustering, clusters are understood as regions of high density separated from each other by zones of lower density, so that they are closely related to certain regions around the density modes. If the true density is indeed in the as...

  18. Unsupervised ensemble minority clustering

    OpenAIRE

    Gonzàlez Pellicer, Edgar; Turmo Borras, Jorge

    2012-01-01

    Cluster analysis lies at the core of most unsupervised learning tasks. However, the majority of clustering algorithms depend on the all-in assumption, in which all objects belong to some cluster, and perform poorly on minority clustering tasks, in which a small fraction of signal data stands against a majority of noise. The approaches proposed so far for minority clustering are supervised: they require the number and distribution of the foreground and background clusters. In supervised learni...

  19. Templated hydrogels for combination devices: therapeutic contact lenses.

    Science.gov (United States)

    Ali, Maryam; Vaughan, Asa D; Zhang, Jeney; Venkatesh, Sid; Byrne, Mark E

    2009-01-01

    Molecular imprinting provides a rational design strategy for the development of controlled release drug delivery systems. We demonstrate that imprinting a network results in macromolecular memory for the template molecule, indicated by the two or more times greater partitioning into these networks as compared to non-imprinted networks. Partitioning of drug into networks synthesized from multiple functional monomers was 8 times greater than networks synthesized from single monomers. One-dimensional permeation studies showed that the gel with maximum incorporated chemical functionality had the lowest diffusion coefficient, which was at least an order of magnitude lower than all other gels studied. All imprinted networks had significantly lower diffusion coefficients than non-imprinted networks, in spite of comparable mesh sizes and equilibrium polymer volume fractions in the swollen state. This work also demonstrates molecular imprinting using a "living/controlled" polymerization strategy to enhance template loading/affinity and delay release in weakly crosslinked gels. Recognition studies revealed more than a 50% increase in template loading and dynamic template release studies showed that imprinting via "living" polymerization extends or delays the template release profile by two-fold over that of imprinting via conventional free-radical polymerization techniques and four-fold over the control network. The imprinted gel and imprinted gel prepared via "living/controlled" polymerization release profiles were less Fickian and moved toward zero-order release with profile coefficients of 0.68 and 0.70, respectively.

  20. Attempted nonenzymatic template-directed oligomerizations on a polyadenylic acid template: implications for the nature of the first genetic material

    Science.gov (United States)

    Stribling, R.; Miller, S. L.

    1991-01-01

    Previous attempts to produce nonenzymatic template-directed oligomerizations of activated pyrimidines on polypurine templates have been unsuccessful. The only efficient reactions are those where the template is composed primarily of pyrimidines, especially cytosine. Because molecular evolution requires that a synthesized daughter polynucleotide be capable of acting as a template for the synthesis of the original polynucleotide, the one-way replication achieved thus far is inadequate to initiate an evolving system. Several uracil analogs were used in this investigation in order to search for possible replacements for uracil. The monomers used in this investigation were the imidazolides of UMP, xanthosine 5'-monophosphate, the bis-monophosphates of the acyclic nucleosides of uracil, and 2,4-quinazolinedione. The concentrations of various salts, buffers, pH, and temperature were among the different variables investigated in attempts to find conditions that would permit template-directed oligomerizations. Although the different monomers in this study demonstrated varying abilities to form very short oligomers, we were unable to detect any enhancement of this oligomerization that could be attributed to the poly(A) template. Although special conditions might be found that would allow purine-rich templates to work, these reactions cannot be considered robust. The results of our experiments suggest that pyrimidines were not part of the original replicating system on the primitive Earth. It has already been shown that ribose is an unlikely component of the first replicating systems, and we now suggest that phosphate was absent as well. This is due to the low solubility of phosphate in the present ocean (3 x 10(-6) M), as well as the difficulty of prebiotic activation of phosphates.

  1. Template-Directed Biopolymerization: Tape-Copying Turing Machines

    Science.gov (United States)

    Sharma, Ajeet K.; Chowdhury, Debashish

    2012-10-01

    DNA, RNA and proteins are among the most important macromolecules in a living cell. These molecules are polymerized by molecular machines. These natural nano-machines polymerize such macromolecules, adding one monomer at a time, using another linear polymer as the corresponding template. The machine utilizes input chemical energy to move along the template which also serves as a track for the movements of the machine. In the Alan Turing year 2012, it is worth pointing out that these machines are "tape-copying Turing machines". We review the operational mechanisms of the polymerizer machines and their collective behavior from the perspective of statistical physics, emphasizing their common features in spite of the crucial differences in their biological functions. We also draw the attention of the physics community to another class of modular machines that carry out a different type of template-directed polymerization. We hope this review will inspire new kinetic models for these modular machines.

  2. Electroless Fabrication of Cobalt Alloys Nanowires within Alumina Template

    Directory of Open Access Journals (Sweden)

    Nazila Dadvand

    2007-01-01

    Full Text Available A new method of nanowire fabrication based on electroless deposition process is described. The method is novel compared to the current electroless procedure used in making nanowires as it involves growing nanowires from the bottom up. The length of the nanowires was controlled at will simply by adjusting the deposition time. The nanowires were fabricated within the nanopores of an alumina template. It was accomplished by coating one side of the template by a thin layer of palladium in order to activate the electroless deposition within the nanopores from bottom up. However, prior to electroless deposition process, the template was pretreated with a suitable wetting agent in order to facilitate the penetration of the plating solution through the pores. As well, the electroless deposition process combined with oblique metal evaporation process within a prestructured silicon wafer was used in order to fabricate long nanowires along one side of the grooves within the wafer.

  3. Computer-Aided Template for Model Reuse, Development and Maintenance

    DEFF Research Database (Denmark)

    Fedorova, Marina; Sin, Gürkan; Gani, Rafiqul

    2014-01-01

    A template-based approach for model development is presented in this work. Based on a model decomposition technique, the computer-aided template concept has been developed. This concept is implemented as a software tool , which provides a user-friendly interface for following the workflow steps......, as well as the guidance through the steps providing additional information and comments. The application of the tool is highlighted with a multiscale modeling case study involving a catalytic membrane fixed bed reactor. The modeling templates for reactor as well as particle scales have been developed...... . For the particle scale, two alternative mechanisms to describe the diffusion inside catalyst pellets are available: a Fickian diffusion model and a dusty gas model . Moreover, the effects of isothermal and non-isothermal catalyst are also considered during the model development process. Thereby, any number...

  4. Template-mediated ontogenesis: A novel approach to mesomorphic materials

    Energy Technology Data Exchange (ETDEWEB)

    Martin, J.E.; Anderson, M.T.; Odinek, J.; Newcomer, P.

    1996-07-01

    In this report the authors describe the methods they have developed for producing stable periodic mesoporous silica gels, thin films of mesoporous silica for sensor applications, a route to nonaqueous synthesis, and the use of various additives in controlling the pore size and structure of these materials. Mesoporous silica is formed by templating silica precursors around micelles of cationic quaternary ammonium surfactants. During the synthesis these micelles undergo a phase transition to a hexagonal, lamellar or cubic liquid crystalline state, thus imposing periodic order on the amorphous silica which occupies the interface of the hydrophilic cationic headgroups of the surfactants. The product of the bulk wet synthesis is a gel composed of micron size silica/surfactant particles, each of which consists of one or more crystalline domains of silica condensed around the surfactant template. The wet gel can then be washed and pyrolyzed to remove the surfactant template, yielding the periodic mesoporous silica product.

  5. Anticipatory Eye Movements in Interleaving Templates of Human Behavior

    Science.gov (United States)

    Matessa, Michael

    2004-01-01

    Performance modeling has been made easier by architectures which package psychological theory for reuse at useful levels of abstraction. CPM-GOMS uses templates of behavior to package at a task level (e.g., mouse move-click, typing) predictions of lower-level cognitive, perceptual, and motor resource use. CPM-GOMS also has a theory for interleaving resource use between templates. One example of interleaving is anticipatory eye movements. This paper describes the use of ACT-Stitch, a framework for translating CPM-GOMS templates and interleaving theory into ACT-R, to model anticipatory eye movements in skilled behavior. The anticipatory eye movements explain performance in a well-practiced perceptual/motor task, and the interleaving theory is supported with results from an eye-tracking experiment.

  6. Templates for Cross-Cultural and Culturally Specific Usability Testing

    DEFF Research Database (Denmark)

    Clemmensen, Torkil

    2011-01-01

    -cultural field study of think-aloud testing done by usability vendor companies in the three countries. The result was a grounded theory of cultural variations in the production of a usability problem list. Study 2 was a follow-up, ethnographic interview study of how the companies typically perform usability......The cultural diversity of users of technology challenges our methods for usability testing. This article suggests templates for cross-culturally and culturally specific usability testing, based on studies of usability testing in companies in Mumbai, Beijing, and Copenhagen. Study 1 was a cross...... tests. The result was the construction of templates for usability testing. The culturally specific templates were in Mumbai “user-centered evaluation,” Copenhagen “client-centered evaluation,” and Beijing “evaluator-centered evaluation.” The findings are compared with related research...

  7. Conducting Polymer Nanostructures: Template Synthesis and Applications in Energy Storage

    Directory of Open Access Journals (Sweden)

    Lijia Pan

    2010-07-01

    Full Text Available Conducting polymer nanostructures have received increasing attention in both fundamental research and various application fields in recent decades. Compared with bulk conducting polymers, conducting polymer nanostructures are expected to display improved performance in energy storage because of the unique properties arising from their nanoscaled size: high electrical conductivity, large surface area, short path lengths for the transport of ions, and high electrochemical activity. Template methods are emerging for a sort of facile, efficient, and highly controllable synthesis of conducting polymer nanostructures. This paper reviews template synthesis routes for conducting polymer nanostructures, including soft and hard template methods, as well as its mechanisms. The application of conducting polymer mesostructures in energy storage devices, such as supercapacitors and rechargeable batteries, are discussed.

  8. In vitro transcription of a torsionally constrained template

    DEFF Research Database (Denmark)

    Bentin, Thomas; Nielsen, Peter E

    2002-01-01

    of torsionally constrained DNA by free RNAP. We asked whether or not a newly synthesized RNA chain would limit transcription elongation. For this purpose we developed a method to immobilize covalently closed circular DNA to streptavidin-coated beads via a peptide nucleic acid (PNA)-biotin conjugate in principle...... mimicking a SAR/MAR attachment. We used this construct as a torsionally constrained template for transcription of the beta-lactamase gene by Escherichia coli RNAP and found that RNA synthesis displays similar characteristics in terms of rate of elongation whether or not the template is torsionally...... constrained. We conclude that transcription of a natural bacterial gene may proceed with high efficiency despite the fact that newly synthesized RNA is entangled around the template in the narrow confines of torsionally constrained supercoiled DNA....

  9. Fabrication of Gold Nanochains with Octreotide Acetate Template

    Directory of Open Access Journals (Sweden)

    Jing Zhou

    2013-01-01

    Full Text Available We described a facile method for assembly gold nanochains by using octreotide acetate as template in aqueous environment. In acidic solution, octreotide acetate was conferred positive charges and its structure changed to chain-like. The monodisperse negative gold nanoparticles were bound to the surface of octreotide acetate template by electrostatic attraction and the interaction of gold nanoparticles with amino acid residues (tryptophan and lysine. The fabricated gold nanostructure presented chain-like observed by transmission electron microscopy. The cytotoxicity of gold nanochains was examined by tetrazolium dye-based microtitration (MTT assay, which demonstrated significantly less toxicity than that of octreotide acetate alone. The MTT assay also reflected the combinative action between the gold nanoparticles with octreotide acetate. Our work lays the groundwork for developing octreotide acetate-templated nanomaterials that can be used as a building block for the creation of nanomaterials. Meanwhile, the harmfulless gold nanochains have great application prospects in the biomedical filed.

  10. Ferritin-Templated Quantum-Dots for Quantum Logic Gates

    Science.gov (United States)

    Choi, Sang H.; Kim, Jae-Woo; Chu, Sang-Hyon; Park, Yeonjoon; King, Glen C.; Lillehei, Peter T.; Kim, Seon-Jeong; Elliott, James R.

    2005-01-01

    Quantum logic gates (QLGs) or other logic systems are based on quantum-dots (QD) with a stringent requirement of size uniformity. The QD are widely known building units for QLGs. The size control of QD is a critical issue in quantum-dot fabrication. The work presented here offers a new method to develop quantum-dots using a bio-template, called ferritin, that ensures QD production in uniform size of nano-scale proportion. The bio-template for uniform yield of QD is based on a ferritin protein that allows reconstitution of core material through the reduction and chelation processes. One of the biggest challenges for developing QLG is the requirement of ordered and uniform size of QD for arrays on a substrate with nanometer precision. The QD development by bio-template includes the electrochemical/chemical reconsitution of ferritins with different core materials, such as iron, cobalt, manganese, platinum, and nickel. The other bio-template method used in our laboratory is dendrimers, precisely defined chemical structures. With ferritin-templated QD, we fabricated the heptagonshaped patterned array via direct nano manipulation of the ferritin molecules with a tip of atomic force microscope (AFM). We also designed various nanofabrication methods of QD arrays using a wide range manipulation techniques. The precise control of the ferritin-templated QD for a patterned arrangement are offered by various methods, such as a site-specific immobilization of thiolated ferritins through local oxidation using the AFM tip, ferritin arrays induced by gold nanoparticle manipulation, thiolated ferritin positioning by shaving method, etc. In the signal measurements, the current-voltage curve is obtained by measuring the current through the ferritin, between the tip and the substrate for potential sweeping or at constant potential. The measured resistance near zero bias was 1.8 teraohm for single holoferritin and 5.7 teraohm for single apoferritin, respectively.

  11. Management of cluster headache

    DEFF Research Database (Denmark)

    Tfelt-Hansen, Peer C; Jensen, Rigmor H

    2012-01-01

    and agitation. Patients may have up to eight attacks per day. Episodic cluster headache (ECH) occurs in clusters of weeks to months duration, whereas chronic cluster headache (CCH) attacks occur for more than 1 year without remissions. Management of cluster headache is divided into acute attack treatment...

  12. Clustering of correlated networks

    OpenAIRE

    Dorogovtsev, S. N.

    2003-01-01

    We obtain the clustering coefficient, the degree-dependent local clustering, and the mean clustering of networks with arbitrary correlations between the degrees of the nearest-neighbor vertices. The resulting formulas allow one to determine the nature of the clustering of a network.

  13. Cluster knockout reactions

    Indian Academy of Sciences (India)

    2014-04-07

    Apr 7, 2014 ... 2 fm) N–N interaction enhances clustering in the low density surface region of the nuclei. Therefore, to study the clustering aspect of the nuclei, one has to have high projectile energies but has to choose kinematics which probes the low momentum component of the bound clusters. While the cluster pickup ...

  14. Cluster knockout reactions

    Indian Academy of Sciences (India)

    2014-04-07

    Apr 7, 2014 ... Cluster knockout reactions are expected to reveal the amount of clustering (such as that of , d and even of heavier clusters such as 12C, 16O etc.) in the target nucleus. In simple terms, incident medium high-energy nuclear projectile interacts strongly with the cluster (present in the target nucleus) as if it ...

  15. Computer-aided modelling template: Concept and application

    DEFF Research Database (Denmark)

    Fedorova, Marina; Sin, Gürkan; Gani, Rafiqul

    2015-01-01

    decomposition technique which identifies generic steps and workflow involved, the computer-aided template concept has been developed. This concept is implemented as a software tool, which provides a user-friendly interface for following the workflow steps and guidance through the steps providing additional......Modelling is an important enabling technology in modern chemical engineering applications. A template-based approach is presented in this work to facilitate the construction and documentation of the models and enable their maintenance for reuse in a wider application range. Based on a model...

  16. An Empirical Ultraviolet Iron Spectrum Template Applicable to Active Galaxies

    DEFF Research Database (Denmark)

    Vestergaard, Marianne; Wilkes, B. J.

    2001-01-01

    Iron emission is often a severe contaminant in optical-ultraviolet spectra of active galaxies. Its presence complicates emission line studies. A viable solution, already successfully applied at optical wavelengths, is to use an empirical iron emission template. We have generated FeII and Fe......III templates for ultraviolet active galaxy spectra based on HST archival 1100 - 3100 A spectra of IZw1. Their application allows fitting and subtraction of the iron emission in active galaxy spectra. This work has shown that in particular CIII] lambda 1909 can be heavily contaminated by other line emission...

  17. Template-Assisted Formation of Nanostructured Dopamine-Modified Polymers

    Directory of Open Access Journals (Sweden)

    Liping Zhu

    2017-11-01

    Full Text Available Dopamine-modified alginate and gelatin were prepared. The polymers were characterized and the properties of their aqueous solutions were investigated. Aqueous solutions of dopamine-modified alginate and gelatin with a concentration exceeding 20 mg/mL naturally formed gels after 16 h. Although polydopamine itself was not used for template-assisted nanostructure formation, the modified polymers could be used with dopamine. Mixing with dopamine allowed the precise shape of the template to be maintained in the resulting material, allowing nanopatterned surfaces and nanotubes to be prepared.

  18. A Bayesian Generative Model for Surface Template Estimation

    Directory of Open Access Journals (Sweden)

    Jun Ma

    2010-01-01

    Full Text Available 3D surfaces are important geometric models for many objects of interest in image analysis and Computational Anatomy. In this paper, we describe a Bayesian inference scheme for estimating a template surface from a set of observed surface data. In order to achieve this, we use the geodesic shooting approach to construct a statistical model for the generation and the observations of random surfaces. We develop a mode approximation EM algorithm to infer the maximum a posteriori estimation of initial momentum μ, which determines the template surface. Experimental results of caudate, thalamus, and hippocampus data are presented.

  19. Templated Atom-Precise Galvanic Synthesis and Structure Elucidation of a [Ag 24 Au(SR) 18 ] − Nanocluster

    KAUST Repository

    Bootharaju, Megalamane Siddaramappa

    2015-11-27

    Synthesis of atom-precise alloy nanoclusters with uniform composition is challenging when the alloying atoms are similar in size (for example, Ag and Au). A galvanic exchange strategy has been devised to produce a compositionally uniform [Ag24Au(SR)18]- cluster (SR: thiolate) using a pure [Ag25(SR)18]- cluster as a template. Conversely, the direct synthesis of Ag24Au cluster leads to a mixture of [Ag25-xAux(SR)18]-, x=1-8. Mass spectrometry and crystallography of [Ag24Au(SR)18]- reveal the presence of the Au heteroatom at the Ag25 center, forming Ag24Au. The successful exchange of the central Ag of Ag25 with Au causes perturbations in the Ag25 crystal structure, which are reflected in the absorption, luminescence, and ambient stability of the particle. These properties are compared with those of Ag25 and Ag24Pd clusters with same ligand and structural framework, providing new insights into the modulation of cluster properties with dopants at the single-atom level.

  20. Solvothermal removal of the organic template from L{sub 3} ('sponge') templated silica monoliths

    Energy Technology Data Exchange (ETDEWEB)

    Dabbs, Daniel M. [Princeton University, Department of Chemical Engineering (United States); Mulders, Norbert [University of Delaware, Department of Physics and Astronomy (United States); Aksay, Ilhan A. [Princeton University, Department of Chemical Engineering (United States)], E-mail: iaksay@princeton.EDU

    2006-10-15

    We compare the methods of continuous solvent (Soxhlet) and supercritical solvent extractions for the removal of the organic template from nanostructured silica monoliths. Our monoliths are formed by templating the L{sub 3} liquid crystal phase of cetylpyridinium chloride in aqueous solutions with tetramethoxy silane. The monoliths that result from both Soxhlet and supercritical extraction methods are mechanically robust, optically clear, and free of cracks. The Soxhlet method compares favorably with supercritical solvent extraction in that equivalent L{sub 3}-templated silica can be synthesized without the use of specialized reactor hardware or higher temperatures and high pressures, while avoiding noxious byproducts. The comparative effectiveness of various solvents in the Soxhlet process is related to the Hildebrand solubility parameter, determined by the effective surface area of the extracted silica.

  1. Clustering in analytical chemistry.

    Science.gov (United States)

    Drab, Klaudia; Daszykowski, Michal

    2014-01-01

    Data clustering plays an important role in the exploratory analysis of analytical data, and the use of clustering methods has been acknowledged in different fields of science. In this paper, principles of data clustering are presented with a direct focus on clustering of analytical data. The role of the clustering process in the analytical workflow is underlined, and its potential impact on the analytical workflow is emphasized.

  2. Waveform Similarity Analysis: A Simple Template Comparing Approach for Detecting and Quantifying Noisy Evoked Compound Action Potentials.

    Directory of Open Access Journals (Sweden)

    Jason Robert Potas

    Full Text Available Experimental electrophysiological assessment of evoked responses from regenerating nerves is challenging due to the typical complex response of events dispersed over various latencies and poor signal-to-noise ratio. Our objective was to automate the detection of compound action potential events and derive their latencies and magnitudes using a simple cross-correlation template comparison approach. For this, we developed an algorithm called Waveform Similarity Analysis. To test the algorithm, challenging signals were generated in vivo by stimulating sural and sciatic nerves, whilst recording evoked potentials at the sciatic nerve and tibialis anterior muscle, respectively, in animals recovering from sciatic nerve transection. Our template for the algorithm was generated based on responses evoked from the intact side. We also simulated noisy signals and examined the output of the Waveform Similarity Analysis algorithm with imperfect templates. Signals were detected and quantified using Waveform Similarity Analysis, which was compared to event detection, latency and magnitude measurements of the same signals performed by a trained observer, a process we called Trained Eye Analysis. The Waveform Similarity Analysis algorithm could successfully detect and quantify simple or complex responses from nerve and muscle compound action potentials of intact or regenerated nerves. Incorrectly specifying the template outperformed Trained Eye Analysis for predicting signal amplitude, but produced consistent latency errors for the simulated signals examined. Compared to the trained eye, Waveform Similarity Analysis is automatic, objective, does not rely on the observer to identify and/or measure peaks, and can detect small clustered events even when signal-to-noise ratio is poor. Waveform Similarity Analysis provides a simple, reliable and convenient approach to quantify latencies and magnitudes of complex waveforms and therefore serves as a useful tool for

  3. Detection of cancerous masses in mammograms by template matching: optimization of template brightness distribution by means of evolutionary algorithm.

    Science.gov (United States)

    Bator, Marcin; Nieniewski, Mariusz

    2012-02-01

    Optimization of brightness distribution in the template used for detection of cancerous masses in mammograms by means of correlation coefficient is presented. This optimization is performed by the evolutionary algorithm using an auxiliary mass classifier. Brightness along the radius of the circularly symmetric template is coded indirectly by its second derivative. The fitness function is defined as the area under curve (AUC) of the receiver operating characteristic (ROC) for the mass classifier. The ROC and AUC are obtained for a teaching set of regions of interest (ROIs), for which it is known whether a ROI is true-positive (TP) or false-positive (F). The teaching set is obtained by running the mass detector using a template with a predetermined brightness. Subsequently, the evolutionary algorithm optimizes the template by classifying masses in the teaching set. The optimal template (OT) can be used for detection of masses in mammograms with unknown ROIs. The approach was tested on the training and testing sets of the Digital Database for Screening Mammography (DDSM). The free-response receiver operating characteristic (FROC) obtained with the new mass detector seems superior to the FROC for the hemispherical template (HT). Exemplary results are the following: in the case of the training set in the DDSM, the true-positive fraction (TPF) = 0.82 for the OT and 0.79 for the HT; in the case of the testing set, TPF = 0.79 for the OT and 0.72 for the HT. These values were obtained for disease cases, and the false-positive per image (FPI) = 2.

  4. Investigation of Terminology Coverage in Radiology Reporting Templates and Free‐text Reports

    Directory of Open Access Journals (Sweden)

    Yi Hong

    2015-06-01

    Full Text Available The Radiological Society of North America (RSNA is improving reporting practices by developing an online library of clear and consistent report templates. To compare term occurrences in free‐text radiology reports and RSNA reporting templates, the Wilcoxon signed‐rank test method was applied to investigate how much of the content of conventional narrative reports is covered by the terms included in the RSNA reporting templates. The results show that the RSNA reporting templates cover most terms that appear in actual radiology reports. The Wilcoxon test may be helpful in evaluatingexisting templates and guiding the enhancement of reporting templates.

  5. From Extraction of Local Structures of Protein Energy Landscapes to Improved Decoy Selection in Template-Free Protein Structure Prediction

    Directory of Open Access Journals (Sweden)

    Nasrin Akhter

    2018-01-01

    Full Text Available Due to the essential role that the three-dimensional conformation of a protein plays in regulating interactions with molecular partners, wet and dry laboratories seek biologically-active conformations of a protein to decode its function. Computational approaches are gaining prominence due to the labor and cost demands of wet laboratory investigations. Template-free methods can now compute thousands of conformations known as decoys, but selecting native conformations from the generated decoys remains challenging. Repeatedly, research has shown that the protein energy functions whose minima are sought in the generation of decoys are unreliable indicators of nativeness. The prevalent approach ignores energy altogether and clusters decoys by conformational similarity. Complementary recent efforts design protein-specific scoring functions or train machine learning models on labeled decoys. In this paper, we show that an informative consideration of energy can be carried out under the energy landscape view. Specifically, we leverage local structures known as basins in the energy landscape probed by a template-free method. We propose and compare various strategies of basin-based decoy selection that we demonstrate are superior to clustering-based strategies. The presented results point to further directions of research for improving decoy selection, including the ability to properly consider the multiplicity of native conformations of proteins.

  6. Nanomolar determination of Pb (II ions by selective templated electrode

    Directory of Open Access Journals (Sweden)

    Mazloum-Ardakani Mohammad

    2012-01-01

    Full Text Available Polypyrrole modified electrode, prepared by electropolymerization of pyrrole in the presence of methyl red as a dopant, was templated with respect to Pb2+ ion and applied for potentiometric and voltammetric detection of this ion. The templating process improved the analytical response characteristics of the electrode, specially their selectivity, with respect to Pb2+ ion. The improvement depends on both the incorporated ligand (dopant and the templating process, with the latter being more vital. The potentiometric response of the electrode was linear within the Pb2+ concentration range of 2.0×10-6 to 5.0×10-2 M with a near-Nernstian slope of 28.6 mV decade-1 and a detection limit of 7.0 ×10-7 M. The electrode was also used for preconcentration differential pulse anodic stripping voltammetry (DPASV and results showed that peak currents for the incorporated lead species were dependent on the metal ion concentration in the range of 1.0×10-8 to 1.0×10-3 M. The detection limit of DPASV method was 3.5 ×10-9 M. The selectivity of the electrode with respect to some transition metal ions was investigated. The modified-templated electrode was used for the successful assay of lead in two standard reference material samples.

  7. organic template free synthesis of zsm11 from kaolinite clay

    African Journals Online (AJOL)

    user

    hydrocarbon, etc. Accordingly, this work present successful synthesis of zeolite ZSM11 from kaolinite clay, seeded with. NaY type zeolite and aged for 3-11 days, in an organic template free condition. The used kaolinite clays were sourced from two different mines in Nigeria, namely; Kankara and Onibode. They were both ...

  8. Ultrafast coherence transfer in DNA-templated silver nanoclusters

    DEFF Research Database (Denmark)

    Thyrhaug, Erling; Bogh, Sidsel Ammitzbøll; Carro, Miguel

    2017-01-01

    DNA-templated silver nanoclusters of a few tens of atoms or less have come into prominence over the last several years due to very strong absorption and efficient emission. Applications in microscopy and sensing have already been realized, however little is known about the excited-state structure...

  9. Public Notification - Revised Total Coliform Rule Failure To Report Template

    Science.gov (United States)

    When a PWS fails to report their monitoring results for Total Coliform bacteria, it must issue a public notice to inform consumers of its water of that failure to report. This template can be used as a guide for preparing that public notice.

  10. On the anodic aluminium oxide refractive index of nanoporous templates

    Science.gov (United States)

    Hierro-Rodriguez, A.; Rocha-Rodrigues, P.; Valdés-Bango, F.; Alameda, J. M.; Jorge, P. A. S.; Santos, J. L.; Araujo, J. P.; Teixeira, J. M.; Guerreiro, A.

    2015-11-01

    In the present study, we have determined the intrinsic refractive index of anodic aluminium oxide, which is originated by the formation of nanoporous alumina templates. Different templates have been fabricated by the conventional two-step anodization procedure in oxalic acid. Their porosities were modified by chemical wet etching allowing the tuning of their effective refractive indexes (air-filled nanopores  +  anodic aluminium oxide). By standard spectroscopic light transmission measurements, the effective refractive index for each different template was extracted in the VIS-NIR region. The determination of the intrinsic anodic aluminium oxide refractive index was performed by using the Maxwell-Garnett homogenization theory. The results are coincident for all the fabricated samples. The obtained refractive index (~1.55) is quite lower (~22%) than the commonly used Al2O3 handbook value (~1.75), showing that the amorphous nature of the anodic oxide structure strongly conditions its optical properties. This difference is critical for the correct design and modeling of optical plasmonic metamaterials based on anodic aluminium oxide nanoporous templates.

  11. Supported lipid bilayers as templates to design manganese oxide ...

    Indian Academy of Sciences (India)

    dioleoyl phosphatidylcholine (DOPC) have been used as templates to synthesize these nanoparticles in a water- based medium at room ... Keywords. Manganese oxide; supported lipid bilayers; nanoparticles; organized assemblies. 1. Introduction .... before coating with two layers of the lipid DOMA,. DOMA+DPPC or ...

  12. Assessing ligand efficiencies using template-based molecular ...

    Indian Academy of Sciences (India)

    Statistical modelling using artificial neural network (ANN: 2 = 0.922) and multiple linear regression method (MLR: 2 = 0.851) showed good correlation between the biological activity, binding affinity, and different ligand efficiencies of the compounds, which suggest the robustness of the template-based binding ...

  13. General Template for the FMEA Applications in Primary Food Processing.

    Science.gov (United States)

    Özilgen, Sibel; Özilgen, Mustafa

    Data on the hazards involved in the primary steps of processing cereals, fruit and vegetables, milk and milk products, meat and meat products, and fats and oils are compiled with a wide-ranging literature survey. After determining the common factors from these data, a general FMEA template is offered, and its use is explained with a case study on pasteurized milk production.

  14. Automatic capture of attention by conceptually generated working memory templates.

    Science.gov (United States)

    Sun, Sol Z; Shen, Jenny; Shaw, Mark; Cant, Jonathan S; Ferber, Susanne

    2015-08-01

    Many theories of attention propose that the contents of working memory (WM) can act as an attentional template, which biases processing in favor of perceptually similar inputs. While support has been found for this claim, it is unclear how attentional templates are generated when searching real-world environments. We hypothesized that in naturalistic settings, attentional templates are commonly generated from conceptual knowledge, an idea consistent with sensorimotor models of knowledge representation. Participants performed a visual search task in the delay period of a WM task, where the item in memory was either a colored disk or a word associated with a color concept (e.g., "Rose," associated with red). During search, we manipulated whether a singleton distractor in the array matched the contents of WM. Overall, we found that search times were impaired in the presence of a memory-matching distractor. Furthermore, the degree of impairment did not differ based on the contents of WM. Put differently, regardless of whether participants were maintaining a perceptually colored disk identical to the singleton distractor, or whether they were simply maintaining a word associated with the color of the distractor, the magnitude of attentional capture was the same. Our results suggest that attentional templates can be generated from conceptual knowledge, in the physical absence of the visual feature.

  15. Making Legacy LMS adaptable using Policy and Policy templates

    NARCIS (Netherlands)

    Koesling, Arne; Herder, Eelco; De Coi, Juri; Abel, Fabian

    2008-01-01

    Koesling, A., Herder, E., De Coi, J., & Abel, F. (2008). Making Legacy LMS adaptable using Policy and Policy templates. In J. Baumeister & M. Atzmüller, Proceedings of the 16th Workshop on Adaptivity and User Modeling in Interactive System, ABIS 2008 (pp. 35-40). October, 6-8, 2008, Würzburg,

  16. Controlled growth of single nanowires within a supported alumina template

    DEFF Research Database (Denmark)

    Vlad, A.; Mátéfi-Tempfli, M.; Faniel, S.

    2006-01-01

    A simple technique for fabricating single nanowires with well-defined position is presented. The process implies the use of a silicon nitride mask for selective electrochemical growth of the nanowires in a porous alumina template. We show that this method allows the realization of complex nanowire...

  17. Exploring Many-Core Design Templates for FPGAs and ASICs

    Directory of Open Access Journals (Sweden)

    Ilia Lebedev

    2012-01-01

    Full Text Available We present a highly productive approach to hardware design based on a many-core microarchitectural template used to implement compute-bound applications expressed in a high-level data-parallel language such as OpenCL. The template is customized on a per-application basis via a range of high-level parameters such as the interconnect topology or processing element architecture. The key benefits of this approach are that it (i allows programmers to express parallelism through an API defined in a high-level programming language, (ii supports coarse-grained multithreading and fine-grained threading while permitting bit-level resource control, and (iii reduces the effort required to repurpose the system for different algorithms or different applications. We compare template-driven design to both full-custom and programmable approaches by studying implementations of a compute-bound data-parallel Bayesian graph inference algorithm across several candidate platforms. Specifically, we examine a range of template-based implementations on both FPGA and ASIC platforms and compare each against full custom designs. Throughout this study, we use a general-purpose graphics processing unit (GPGPU implementation as a performance and area baseline. We show that our approach, similar in productivity to programmable approaches such as GPGPU applications, yields implementations with performance approaching that of full-custom designs on both FPGA and ASIC platforms.

  18. Polymerase chain reaction preparation of template for massively parallel pyrosequencing.

    Science.gov (United States)

    Whetten, Ross W; Sofía, Valenzuela A; Frampton, John

    2009-04-01

    Massively parallel pyrosequencing of DNA fragments immobilized on beads has been applied to genome survey sequencing and transcriptome analysis of a variety of eukaryotic organisms, including laboratory model species, agricultural crops and livestock, and species of interest to population biologists and ecologists. Preparation of sufficient high-quality template for sequencing has been an obstacle to sequence analysis of nucleic acids from tissues or cell types available in limited quantities. We report that the use of a biotinylated primer for polymerase chain reaction amplification allows removal of excess primer and poly(A) tract fragments from the sequencing templates, providing much higher yields of useful sequence information from pyrosequencing of amplified templates. This advance allows deep sequencing analysis of nucleic acids isolated from very small tissue samples. Massively parallel pyrosequencing is particularly useful for preliminary investigations of species that have not yet been the subject of significant genomic research, as genomic survey sequences and catalogs of expressed genes provide a means of linking the biology of less intensively studied species to that of more intensively studied model organisms. We obtained over 220 Mb of transcript DNA sequences from Abies fraseri (Pursh) Poir., a conifer species native to the southern Appalachian Mountains of eastern North America. Comparison of the resulting assembled putative transcripts with similar data obtained by other sequencing methods from other conifers demonstrates the utility of the improved sequencing template preparation.

  19. A visual template-matching method for articulation angle measurement

    CSIR Research Space (South Africa)

    De Saxe, C

    2015-09-01

    Full Text Available and proposed sensing methods are limited either in terms of commercial feasibility or measurement accuracy. This paper investigates a vision-based system consisting of a single tractor-mounted camera, a template-matching image processing algorithm...

  20. Binary gabor statistical features for palmprint template protection

    NARCIS (Netherlands)

    Mu, Meiru; Ruan, Qiuqi; Shao, X.; Spreeuwers, Lieuwe Jan; Veldhuis, Raymond N.J.

    2012-01-01

    The biometric template protection system requires a highquality biometric channel and a well-designed error correction code (ECC). Due to the intra-class variations of biometric data, an efficient fixed-length binary feature extractor is required to provide a high-quality biometric channel so that

  1. Abbreviated Pandemic Influenza Planning Template for Primary Care Offices

    Energy Technology Data Exchange (ETDEWEB)

    HCTT CHE

    2010-01-01

    The Abbreviated Pandemic Influenza Plan Template for Primary Care Provider Offices is intended to assist primary care providers and office managers with preparing their offices for quickly putting a plan in place to handle an increase in patient calls and visits, whether during the 2009-2010 influenza season or future influenza seasons.

  2. Conformational studies of common protein templates in macromolecularly imprinted polymers.

    Science.gov (United States)

    Kryscio, David R; Fleming, Michael Q; Peppas, Nicholas A

    2012-08-01

    Unlike the molecular imprinting of small molecule templates, molecularly imprinted polymers specific to large templates (>1,500 Da), have achieved limited success to date. Conformational stability of these labile macromolecules is one of the main factors that prevent the direct extension of successful procedures from the small molecule regime. We continue our systematic investigation of the effect of common components in macromolecular MIPs on the conformation of protein templates. Circular dichroism was used to show that frequently employed monomers and crosslinkers induce significant changes in the secondary structures of lysozyme and bovine hemoglobin. The extent to which this change occurs, at ligand concentrations far below what are typically used reported work, is cause for concern and provides as rational explanation for the lack of success in this arena. This is because a change in the template structure prior to polymerization would lead to the binding sites formed during polymerization to be specific to this alternate conformation. Subsequent studies with the macromolecule in its native state and the crosslinked network would not be successful. Using this information as a guide, we offer suggestions as to where work in macromolecular imprinted polymers should focus going forward in order for these antibody mimics to reach their vast potential as a new class of biomedical diagnostic devices.

  3. Synthesis of zeolite-templated carbons for hydrogen storage applications

    CSIR Research Space (South Africa)

    Musyoka, Nicholas M

    2013-10-01

    Full Text Available Hydrogen storage has been a key bottle-neck in the actualization of hydrogen as an energy carrier. The new field of hydrogen storage in templated carbonaceous materials has excited many researchers and considerable effort is being directed...

  4. A Comparison Between Craniofacial Templates of Iranian and Western Populations

    Directory of Open Access Journals (Sweden)

    Tahereh Hosseinzadeh Nik

    2012-02-01

    Full Text Available Templates are very useful tools for diagnosis of malocclusions. A number of templates have been provided for some populations in previous years. Since craniofacial characteristics of different ethnic groups are not the same, each population needs its own norms. The aim of this study was to provide orthodontic craniofacial templates for 8-16 year old Iranian boys and compare dentoskeletal features between Iranian and western populations. 3330 boys with the age range of 8-16 years were examined in Tehran, and 107 cases were finally chosen for the study and their lateral cephalograms were traced. Since there is no universal, consensus about the selection of one specific point or line for cephalometric superimposition, both the sella nasion (SN and basion nasion (Ba-N lines were chosen for this purpose. Based on both SN and Ba-N lines, a template was prepared for each age. Simple linear regression analysis was used to evaluate the angles and the multivariant regression analysis for evaluation of landmark vectors. Posterior cranial base, maxillary and mandibular lengths, upper and lower anterior facial heights (N-ANS and ANS-Me and posterior facial height (S-Go are greater in Iranian population. But anterior cranial base, height and inclination of the incisors and molar height are similar in two populations.

  5. Involute Spur Gear Template Development by Parametric Technique ...

    African Journals Online (AJOL)

    Nekky Umera

    An International Multi-Disciplinary Journal, Ethiopia. Vol. 3 (2), January, 2009. ISSN 1994-9057 (Print). ISSN 2070-0083 (Online). Involute Spur Gear Template Development by ... The third method and the most accurate system is the graphic ..... a three-dimensional part directly from a parametric solid modeled gear file.

  6. Battery Data MI Importer Template Quick Start Guide

    Science.gov (United States)

    Levinson, Laurie H.

    2017-01-01

    In order to ensure the persistent availability and reliability of test data generated over the course of the project, the M-SHELLS Project has decided to store acquired test data, as well as associated pedigree information, in the Granta Materials Intelligence (MI) database. To facilitate that effort, an importer template and associated graphical user interface (GUI) software have been developed, with this guide providing the operating instructions for their use. The template and automation software GUI are contained in the BatteryDataImporter.xlsm Excel workbook, and are to be used to import M-SHELLS summary, or pedigree, data and the associated raw test data results into an importer template-based file, formatted in such a way as to be ready for immediate upload to the Test Data: Battery Performance table of the Granta MI database. The provided GUI enables the user to select the appropriate summary data file(s), with each file containing the required information to identify any associated raw test data file(s) to be processed. In addition to describing the setup and operation of the importer template and GUI software, this guide also provides instructions for uploading processed data to the database and for viewing the data following upload.

  7. Natural biopolymers : novel templates for the synthesis of nanostructures.

    Science.gov (United States)

    Sonal Padalkar; J.R. Capadona; S.J. Rowan; C. Weder; Yu-Ho Won; Lia A. Stanciu; Robert J. Moon

    2010-01-01

    Biological systems such as proteins, viruses, and DNA have been most often reported to be used as templates for the synthesis of functional nanomaterials, but the properties of widely available biopolymers, such as cellulose, have been much less exploited for this purpose. Here, we report for the first time that cellulose nanocrystals (CNC) have the capacity to assist...

  8. Ordered nanoparticle arrays formed on engineered chaperonin protein templates

    Science.gov (United States)

    McMillan, R. Andrew; Paavola, Chad D.; Howard, Jeanie; Chan, Suzanne L.; Zaluzec, Nestor J.; Trent, Jonathan D.

    2002-01-01

    Traditional methods for fabricating nanoscale arrays are usually based on lithographic techniques. Alternative new approaches rely on the use of nanoscale templates made of synthetic or biological materials. Some proteins, for example, have been used to form ordered two-dimensional arrays. Here, we fabricated nanoscale ordered arrays of metal and semiconductor quantum dots by binding preformed nanoparticles onto crystalline protein templates made from genetically engineered hollow double-ring structures called chaperonins. Using structural information as a guide, a thermostable recombinant chaperonin subunit was modified to assemble into chaperonins with either 3 nm or 9 nm apical pores surrounded by chemically reactive thiols. These engineered chaperonins were crystallized into two-dimensional templates up to 20 microm in diameter. The periodic solvent-exposed thiols within these crystalline templates were used to size-selectively bind and organize either gold (1.4, 5 or 10nm) or CdSe-ZnS semiconductor (4.5 nm) quantum dots into arrays. The order within the arrays was defined by the lattice of the underlying protein crystal. By combining the self-assembling properties of chaperonins with mutations guided by structural modelling, we demonstrate that quantum dots can be manipulated using modified chaperonins and organized into arrays for use in next-generation electronic and photonic devices.

  9. Cu(I)/Cu(II) templated functional pseudorotaxanes and rotaxanes

    Indian Academy of Sciences (India)

    tion, (ii) donor/acceptor forces, (iii) hydrogen bond- ing, (iv) π–π stacking, (v) electrostatic forces.13 Metal ions as templates has shown accessible pathways ..... 34 456; (e) Sauvage J P (ed.) 2001 Molecu- lar machines and motors; Structure and bonding; Berlin,. Germany: Springer. 7. (a) Kay E R, Leigh D A and Zerbetto F ...

  10. A computationally efficient approach for template matching-based ...

    Indian Academy of Sciences (India)

    Image registration using template matching is an important step in image processing. In this paper, a simple, robust and computationally efficient approach is presented. The proposed approach is based on the properties of a normalized covariance matrix. The main advantage of the proposed approach is that the image ...

  11. Enzyme Activity and Biomolecule Templating at Liquid and Solid Interfaces

    Energy Technology Data Exchange (ETDEWEB)

    Harvey W. Blanch

    2004-12-01

    There are two main components of this research program. The first involves studies of the adsorption and catalytic activity of proteins at fluid-fluid and fluid-solid interfaces; the second employs biological macromolecules as templates at the solid-liquid interface for controlled crystallization of inorganic materials, to provide materials with specific functionality.

  12. Identification of inhibitors of checkpoint kinase 1 through template screening.

    Science.gov (United States)

    Matthews, Thomas P; Klair, Suki; Burns, Samantha; Boxall, Kathy; Cherry, Michael; Fisher, Martin; Westwood, Isaac M; Walton, Michael I; McHardy, Tatiana; Cheung, Kwai-Ming J; Van Montfort, Rob; Williams, David; Aherne, G Wynne; Garrett, Michelle D; Reader, John; Collins, Ian

    2009-08-13

    Checkpoint kinase 1 (CHK1) is an oncology target of significant current interest. Inhibition of CHK1 abrogates DNA damage-induced cell cycle checkpoints and sensitizes p53 deficient cancer cells to genotoxic therapies. Using template screening, a fragment-based approach to small molecule hit generation, we have identified multiple CHK1 inhibitor scaffolds suitable for further optimization. The sequential combination of in silico low molecular weight template selection, a high concentration biochemical assay and hit validation through protein-ligand X-ray crystallography provided 13 template hits from an initial in silico screening library of ca. 15000 compounds. The use of appropriate counter-screening to rule out nonspecific aggregation by test compounds was essential for optimum performance of the high concentration bioassay. One low molecular weight, weakly active purine template hit was progressed by iterative structure-based design to give submicromolar pyrazolopyridines with good ligand efficiency and appropriate CHK1-mediated cellular activity in HT29 colon cancer cells.

  13. Processing of Nanosensors Using a Sacrificial Template Approach

    Science.gov (United States)

    Biaggi-Labiosa, Azlin M.; Hunter, Gary W.

    2012-01-01

    A new microsensor fabrication approach has been demonstrated based upon the use of nanostructures as templates. The fundamental idea is that existing nanostructures, such as carbon nano tubes or biological structures, have a material structure that can be used advantageously in order to provide new sensor systems but lack the advantages of some materials to, for example, operate at high temperatures. The approach is to start with a template using nanostructures such as a carbon nanotube. This template can then be coated by an oxide material with higher temperature capabilities. Upon heating in air, the carbon nanotube template is burned off, leaving only the metal oxide nanostructure. The resulting structure has a combination of the crystal structure and surface morphology of the carbon nanotube, combined with the material durability and hightemperature- sensing properties of the metal oxide. Further, since the metal oxide nanocrystals are deposited on the carbon nanotube, after burn-off what is left is a metal oxide porous nanostructure. This makes both the interior and the exterior of this nano structured sensor available for gas species detection. This, in effect, increases the surface area available for sensing, which has been shown in the past to significantly increase sensor performance.

  14. Julius – a template based supplementary electronic health record system

    Directory of Open Access Journals (Sweden)

    Klein Gunnar O

    2007-05-01

    Full Text Available Abstract Background EHR systems are widely used in hospitals and primary care centres but it is usually difficult to share information and to collect patient data for clinical research. This is partly due to the different proprietary information models and inconsistent data quality. Our objective was to provide a more flexible solution enabling the clinicians to define which data to be recorded and shared for both routine documentation and clinical studies. The data should be possible to reuse through a common set of variable definitions providing a consistent nomenclature and validation of data. Another objective was that the templates used for the data entry and presentation should be possible to use in combination with the existing EHR systems. Methods We have designed and developed a template based system (called Julius that was integrated with existing EHR systems. The system is driven by the medical domain knowledge defined by clinicians in the form of templates and variable definitions stored in a common data repository. The system architecture consists of three layers. The presentation layer is purely web-based, which facilitates integration with existing EHR products. The domain layer consists of the template design system, a variable/clinical concept definition system, the transformation and validation logic all implemented in Java. The data source layer utilizes an object relational mapping tool and a relational database. Results The Julius system has been implemented, tested and deployed to three health care units in Stockholm, Sweden. The initial responses from the pilot users were positive. The template system facilitates patient data collection in many ways. The experience of using the template system suggests that enabling the clinicians to be in control of the system, is a good way to add supplementary functionality to the present EHR systems. Conclusion The approach of the template system in combination with various local EHR

  15. Growth of metalloid aluminum clusters on graphene vacancies

    Science.gov (United States)

    Alnemrat, Sufian; Mayo, Dennis H.; DeCarlo, Samantha; Hooper, Joseph P.

    2016-01-01

    Ab initio simulations are used to show that graphene vacancy sites may offer a means of templated growth of metalloid aluminum clusters from their monohalide precursors. We present density functional theory and ab initio molecular dynamics simulations of the aluminum halide AlCl interacting with a graphene surface. Unlike a bare Al adatom, AlCl physisorbs weakly on vacancy-free graphene with little charge transfer and no hybridization with carbon orbitals. The barrier for diffusion of AlCl along the surface is negligible. Covalent bonding is seen only with vacancies and results in strong chemisorption and considerable distortion of the nearby lattice. Car-Parrinello molecular dynamics simulations of AlCl liquid around a graphene single vacancy show spontaneous metalloid cluster growth via a process of repeated insertion reactions. This suggests a means of templated cluster nucleation and growth on a carbon substrate and provides some confirmation for the role of a trivalent aluminum species in nucleating a ligated metalloid cluster from AlCl and AlBr solutions.

  16. A new route of synthesizing perovskite nanotubes by templating approach

    Science.gov (United States)

    Habiballah, Anisah Shafiqah; Osman, Nafisah; Jani, Abdul Mutalib Md

    2017-09-01

    A perovskite oxide for example Ba0.5Sr0.5Co0.8Fe0.2O3-δ (BSCF) has attracted growing attention due to its high catalytic activity and mixed ionic/electronic conductivity. Recent research of BSCF is more comprehensively based on a remarkable trajectory of innovation, in particular with regards to the synthesis of perovskite structures in one-dimensional (1-D) nanometric scales as they promote not only to increase an active electrode area for the oxygen reduction reaction, but also allow the tailoring of electrode's architecture. Nevertheless, achieving the desired 1-D structure by a conventional method such as hydrothermal, solvothermal, or sonochemical are far from satisfactory. Herein, the aim of this work is to synthesize the BSCF perovskite nanotubes via soft templating approach, particularly using anodic aluminium oxide (AAO) as a template, focusing on the morphology, composition and structural properties were demonstrated. After the AAO template was anodized at 80 V, the fabricated template was clamped between apair of spectroscopic cells containing BSCF sol and deionized water (with a hole of both sides) for 24 hours. After that, the sample was removed from the cells followed by heat treatment process. The FESEM images showed that BSCF nanotubes were successfully achieved, with the diameter of the nanotubes' approximately 80 nm. The EDX result also confirmed the nominal stoichiometry of Ba0.5Sr0.5Co0.8Fe0.2O3-δ. Meanwhile, the XRD pattern confirmed a single crystalline phase of BSCF nanotubes was successfully obtained and congruent to a cubic perovskite structure of BSCF. Possible formation mechanism,as well as the schematic illustration of BSCF nanotubes inside the template was also discussed in this paper.

  17. What Makes Clusters Decline?

    DEFF Research Database (Denmark)

    Østergaard, Christian Richter; Park, Eun Kyung

    2015-01-01

    Most studies on regional clusters focus on identifying factors and processes that make clusters grow. However, sometimes technologies and market conditions suddenly shift, and clusters decline. This paper analyses the process of decline of the wireless communication cluster in Denmark....... The longitudinal study on the high-tech cluster reveals that technological lock-in and exit of key firms have contributed to decline. Entrepreneurship has a positive effect on the cluster’s adaptive capabilities, while multinational companies have contradicting effects by bringing in new resources to the cluster...

  18. Comprehensive cluster analysis with Transitivity Clustering.

    Science.gov (United States)

    Wittkop, Tobias; Emig, Dorothea; Truss, Anke; Albrecht, Mario; Böcker, Sebastian; Baumbach, Jan

    2011-03-01

    Transitivity Clustering is a method for the partitioning of biological data into groups of similar objects, such as genes, for instance. It provides integrated access to various functions addressing each step of a typical cluster analysis. To facilitate this, Transitivity Clustering is accessible online and offers three user-friendly interfaces: a powerful stand-alone version, a web interface, and a collection of Cytoscape plug-ins. In this paper, we describe three major workflows: (i) protein (super)family detection with Cytoscape, (ii) protein homology detection with incomplete gold standards and (iii) clustering of gene expression data. This protocol guides the user through the most important features of Transitivity Clustering and takes ∼1 h to complete.

  19. TEMPLATE POLYMERIZATION OF N-VINYLIMIDAZOLE ALONG POLY(METHACRYLIC ACID) IN WATER .2. KINETICS OF THE TEMPLATE POLYMERIZATION

    NARCIS (Netherlands)

    VANDEGRAMPEL, HT; TAN, YY; CHALLA, G

    1991-01-01

    The template polymerization of N-vinylimidazole (VIm) along poly(methacrylic acid) (PMAA) in water at 50-degrees-C with 2,2'-azobis(2-amidinopropane).2HCl (AAP) as initiator was studied by using variable initiator and monomer concentrations at constant [PMAA]/[VIm]0. From the order in [VIm] it was

  20. Fast Constrained Spectral Clustering and Cluster Ensemble with Random Projection

    National Research Council Canada - National Science Library

    Wenfen Liu; Mao Ye; Jianghong Wei; Xuexian Hu

    2017-01-01

    Constrained spectral clustering (CSC) method can greatly improve the clustering accuracy with the incorporation of constraint information into spectral clustering and thus has been paid academic attention widely...

  1. TOSCA-based orchestration of complex clusters at the IaaS level

    Science.gov (United States)

    Caballer, M.; Donvito, G.; Moltó, G.; Rocha, R.; Velten, M.

    2017-10-01

    This paper describes the adoption and extension of the TOSCA standard by the INDIGO-DataCloud project for the definition and deployment of complex computing clusters together with the required support in both OpenStack and OpenNebula, carried out in close collaboration with industry partners such as IBM. Two examples of these clusters are described in this paper, the definition of an elastic computing cluster to support the Galaxy bioinformatics application where the nodes are dynamically added and removed from the cluster to adapt to the workload, and the definition of an scalable Apache Mesos cluster for the execution of batch jobs and support for long-running services. The coupling of TOSCA with Ansible Roles to perform automated installation has resulted in the definition of high-level, deterministic templates to provision complex computing clusters across different Cloud sites.

  2. Clustering high dimensional data

    DEFF Research Database (Denmark)

    Assent, Ira

    2012-01-01

    High-dimensional data, i.e., data described by a large number of attributes, pose specific challenges to clustering. The so-called ‘curse of dimensionality’, coined originally to describe the general increase in complexity of various computational problems as dimensionality increases, is known...... for clustering are required. Consequently, recent research has focused on developing techniques and clustering algorithms specifically for high-dimensional data. Still, open research issues remain. Clustering is a data mining task devoted to the automatic grouping of data based on mutual similarity. Each cluster...... groups objects that are similar to one another, whereas dissimilar objects are assigned to different clusters, possibly separating out noise. In this manner, clusters describe the data structure in an unsupervised manner, i.e., without the need for class labels. A number of clustering paradigms exist...

  3. Analytical template protection performance and maximum key size given a Gaussian-modeled biometric source

    NARCIS (Netherlands)

    Kelkboom, E.J.C.; Breebaart, Jeroen; Buhan, I.R.; Veldhuis, Raymond N.J.; Vijaya Kumar, B.V.K.; Prabhakar, Salil; Ross, Arun A.

    2010-01-01

    Template protection techniques are used within biometric systems in order to protect the stored biometric template against privacy and security threats. A great portion of template protection techniques are based on extracting a key from or binding a key to a biometric sample. The achieved

  4. Multi-template tensor-based morphometry: application to analysis of Alzheimer's disease

    DEFF Research Database (Denmark)

    Koikkalainen, Juha; Lötjönen, Jyrki; Thurfjell, Lennart

    2011-01-01

    In this paper methods for using multiple templates in tensor-based morphometry (TBM) are presented and compared to the conventional single-template approach. TBM analysis requires non-rigid registrations which are often subject to registration errors. When using multiple templates and, therefore,...

  5. Multi-template synthesis of hierarchically porous carbon spheres with potential application in supercapacitors

    NARCIS (Netherlands)

    Zhou, Weizheng; Lin, Zhixing; Tong, Gangsheng; Stoyanov, Simeon D.; Yan, Deyue; Mai, Yiyong; Zhu, Xinyuan

    2016-01-01

    A new and simple multi-template approach towards hierarchical porous carbon (HPC) materials was reported. HPC spheres were prepared by using hierarchical silica capsules (HSCs) as the hard template and triblock copolymer Pluronic P123 as the soft template. Three types of pores were tunably

  6. Pitfall of the Detection Rate Optimized Bit Allocation within template protection and a remedy

    NARCIS (Netherlands)

    Kelkboom, E.J.C.; de Groot, K.T.J.; Chen, C.; Breebaart, J.; Veldhuis, Raymond N.J.

    2009-01-01

    One of the requirements of a biometric template protection system is that the protected template ideally should not leak any information about the biometric sample or its derivatives. In the literature, several proposed template protection techniques are based on binary vectors. Hence, they require

  7. Pulsars in Globular Clusters

    OpenAIRE

    Camilo, Fernando; Rasio, Frederic A.

    2005-01-01

    More than 100 radio pulsars have been detected in 24 globular clusters. The largest observed samples are in Terzan 5 and 47 Tucanae, which together contain 45 pulsars. Accurate timing solutions, including positions in the cluster, are known for many of these pulsars. Here we provide an observational overview of some properties of pulsars in globular clusters, as well as properties of the globular clusters with detected pulsars. The many recent detections also provide a new opportunity to re-e...

  8. Biossegurança e desastres: conceitos, prevenção, saúde pública e manejo de cadáveres Biosecurity and disaster: concepts, prevention, public health and management of corpses

    Directory of Open Access Journals (Sweden)

    Telma Abdalla de Oliveira Cardoso

    2012-01-01

    Full Text Available O artigo discute a complexidade dos desastres, realçando situações de risco e a essencialidade do suporte da Biossegurança, uma vez que, em episódios com vítimas fatais, os procedimentos formulados por este campo devem ser adotados no manejo de cadáveres, sobretudo quando da ocorrência de soterramento com busca de corpos. Contextualiza a magnitude dos desastres caracterizados pelas chuvas e suas consequências (deslizamentos, soterramento, enfatizando o fenômeno do aquecimento global e as mudanças climáticas e seus impactos sobre as comunidades, em especial as mais pobres, valorizando a análise do conceito de vulnerabilidade a partir do cenário da urbanização, da degradação do meio ambiente causada pelo manejo inadequado dos recursos naturais, da contaminação ambiental, das políticas públicas ineficientes, sublinhando o baixo investimento em infraestrutura. Sublinha o conceito de desastre como fenômeno imprevisível, súbito e violento, que causa grande número de mortos e destruição. Enfatiza as problemáticas sociais, sanitárias, jurídicas e operacionais quando do registro de um número elevado mortes ocorridas ao mesmo tempo ou em curto espaço de tempo. Traz para a análise a contribuição da Biossegurança como orientadora dos planos de emergência voltados para os desastres, realçando o risco biológico e as medidas necessárias para o manejo de cadáveres.The paper discusses the complexity of disasters, enhancing risk situations and the importance of support from Biosecurity, as in episodes with fatalities, procedures formulated by this field should be adopted in the handling of corpses, particularly when occurring with search of buried bodies. It contextualizes the magnitude of the disaster characterized by rain and its aftermath (landslides, burying, emphasizing the phenomenon of global warming and climate change and its impacts on communities, especially the poorest, valuing the concept analysis of

  9. Cluster Physics with Merging Galaxy Clusters

    Directory of Open Access Journals (Sweden)

    Sandor M. Molnar

    2016-02-01

    Full Text Available Collisions between galaxy clusters provide a unique opportunity to study matter in a parameter space which cannot be explored in our laboratories on Earth. In the standard LCDM model, where the total density is dominated by the cosmological constant ($Lambda$ and the matter density by cold dark matter (CDM, structure formation is hierarchical, and clusters grow mostly by merging.Mergers of two massive clusters are the most energetic events in the universe after the Big Bang,hence they provide a unique laboratory to study cluster physics.The two main mass components in clusters behave differently during collisions:the dark matter is nearly collisionless, responding only to gravity, while the gas is subject to pressure forces and dissipation, and shocks and turbulenceare developed during collisions. In the present contribution we review the different methods used to derive the physical properties of merging clusters. Different physical processes leave their signatures on different wavelengths, thusour review is based on a multifrequency analysis. In principle, the best way to analyze multifrequency observations of merging clustersis to model them using N-body/HYDRO numerical simulations. We discuss the results of such detailed analyses.New high spatial and spectral resolution ground and space based telescopeswill come online in the near future. Motivated by these new opportunities,we briefly discuss methods which will be feasible in the near future in studying merging clusters.

  10. Structure and Thermodynamics of Metal Clusters on Atomically Smooth Substrates.

    Science.gov (United States)

    Eckhoff, M; Schebarchov, D; Wales, D J

    2017-10-23

    We analyze the structure of model NiN and CuN clusters (N = 55, 147) supported on a variety of atomically smooth van der Waals surfaces. The global minima are mapped in the space of two parameters: (i) the laterally averaged surface stickiness, γ, which controls the macroscopic wetting angle, and (ii) the surface microstructure, which produces more subtle but important templating via epitaxial stresses. We find that adjusting the substrate lattice (even at constant γ) can favor different crystal plane orientations in the cluster, stabilize hexagonal close-packed order, or induce various defects, such as stacking faults, twin boundaries, and five-fold disclinations. Thermodynamic analysis reveals substrate-dependent solid-solid transitions in cluster morphology, with tunable transition temperature and sometimes exhibiting re-entrant behavior. These results shed new light on the extent to which a supporting surface can be used to influence the equilibrium behavior of nanoparticles.

  11. Clustering of Galaxy Clusters at Intermediate Redshifts

    Science.gov (United States)

    Postman, Marc; Lauer, Tod R.; Oegerle, William

    2001-02-01

    We propose to continue a redshift survey of 141 objectively selected galaxy clusters to measure their clustering properties and constrain models of the formation of structure in the universe. This is the first redshift survey to probe cluster correlations on comoving scales of ~ 50h_75^-1 Mpc at z ~ 0.5 and will thus provide an original and important constraint on the evolution of large-scale structure. The cluster sample comes from our deep (I_AB ≤ 24), contiguous 16 deg^2 I-band KPNO 4-m survey. The proposed observations distinguish themselves from other ongoing distant cluster redshift work in that this survey will be able to provide meaningful constraints on the large-scale spatial distribution of moderate redshift clusters owing to the large angular area and contiguous geometry of the parent survey. The availability of the HET/LRS provides a highly efficient solution to the acquisition of redshifts for the 80 cluster candidates with 0.6 ≤ z_est ≤ 0.7. The systems with z_est > 0.6 are needed to assure complete sampling of the cluster population at z_obs ~ 0.5. The survey declination (52+/-2°) and observational strategy are extremely well-suited to the initial capabilities and queue observing mode of the HET. The 4m/RCSP is well suited to completing the survey of the z_est data. This survey began using the KPNO 4m to obtain redshifts for the 0.3 ≤ z_est < 0.6 sample. So far, we have observed 31 clusters and we're presently ~25% complete with the z_est < 0.6 observations (75% complete for z_est < 0.4). We have discovered at least 2 superclusters at z=0.23 and z=0.50.

  12. Marketing research cluster analysis

    Directory of Open Access Journals (Sweden)

    Marić Nebojša

    2002-01-01

    Full Text Available One area of applications of cluster analysis in marketing is identification of groups of cities and towns with similar demographic profiles. This paper considers main aspects of cluster analysis by an example of clustering 12 cities with the use of Minitab software.

  13. The Durban Auto Cluster

    DEFF Research Database (Denmark)

    Lorentzen, Jochen; Robbins, Glen; Barnes, Justin

    2004-01-01

    The paper describes the formation of the Durban Auto Cluster in the context of trade liberalization. It argues that the improvement of operational competitiveness of firms in the cluster is prominently due to joint action. It tests this proposition by comparing the gains from cluster activities...

  14. Cosmology with cluster surveys

    Indian Academy of Sciences (India)

    Surveys of clusters of galaxies provide us with a powerful probe of the density and nature of the dark energy. The red-shift distribution of detected clusters is highly sensitive to the dark energy equation of state parameter . Upcoming Sunyaev–Zel'dovich (SZ) surveys would provide us large yields of clusters to very high ...

  15. Cosmology with cluster surveys

    Indian Academy of Sciences (India)

    Cosmology with cluster surveys. SUBHABRATA MAJUMDAR. CITA, University of Toronto, Toronto, ON, M5S 3H8, Canada. E-mail: subha@cita.utoronto.ca. Abstract. Surveys of clusters of galaxies provide us with a powerful probe of the den- sity and nature of the dark energy. The red-shift distribution of detected clusters is.

  16. Formation of stellar clusters

    Science.gov (United States)

    Smilgys, Romas; Bonnell, Ian A.

    2017-12-01

    We investigate the triggering of star formation and the formation of stellar clusters in molecular clouds which form as the interstellar medium passes through spiral shocks. The spiral shock compresses gas into an ∼100 pc long main star formation ridge, where clusters form every 5-10 pc along the merger ridge. We use a gravitational potential-based cluster finding algorithm, which extracts individual clusters, calculates their physical properties and traces cluster evolution over multiple time-steps. Final cluster masses at the end of simulation range between 1000 and 30 000 M⊙ with their characteristic half-mass radii between 0.1 and 2 pc. These clusters form by gathering material from 10-20 pc size scales. Clusters also show a mass-specific angular momentum relation, where more massive clusters have larger specific angular momentum due to the larger size scales, and hence angular momentum from which they gather their mass. The evolution shows that more massive clusters experience hierarchical merging process, which increases stellar age spreads up to 2-3 Myr. Less massive clusters appear to grow by gathering nearby recently formed sinks, while more massive clusters with their large global gravitational potentials are increasing their mass growth from gas accretion.

  17. Relational aspects of clusters

    DEFF Research Database (Denmark)

    Gjerding, Allan Næs

    The present paper is the first preliminary account of a project being planned for 2013, focussing on the development of the biomedico cluster in North Denmark. The project focusses on the relational capabilities of the cluster in terms of a number of organizational roles which are argued...... to be necessary for the development and growth of the upcoming cluster in question....

  18. Structures of Mn clusters

    Indian Academy of Sciences (India)

    Abstract. The geometries of several Mn clusters in the size range Mn13–Mn23 are studied via the generalized gradient approximation to density functional theory. For the 13- and 19-atom clusters, the icosahedral structures are found to be most stable, while for the 15-atom cluster, the bcc structure is more favoured.

  19. Structures of Mn clusters

    Indian Academy of Sciences (India)

    Unknown

    Abstract. The geometries of several Mn clusters in the size range Mn13–Mn23 are studied via the generalized gradient approximation to density functional theory. For the 13- and 19-atom clusters, the icosahedral struc- tures are found to be most stable, while for the 15-atom cluster, the bcc structure is more favoured.

  20. Trimetallic nitride template endohedral metallofullerenes: discovery, structural characterization, reactivity, and applications.

    Science.gov (United States)

    Zhang, Jianyuan; Stevenson, Steven; Dorn, Harry C

    2013-07-16

    Shortly after the discovery of the carbon fullerene allotrope, C₆₀, researchers recognized that the hollow spheroidal shape could accommodate metal atoms, or clusters, which quickly led to the discovery of endohedral metallofullerenes (EMFs). In the past 2 decades, the unique features of EMFs have attracted broad interest in many fields, including inorganic chemistry, organic chemistry, materials chemistry, and biomedical chemistry. Some EMFs produce new metallic clusters that do not exist outside of a fullerene cage, and some other EMFs can boost the efficiency of magnetic resonance (MR) imaging 10-50-fold, in comparison with commercial contrast agents. In 1999, the Dorn laboratory discovered the trimetallic nitride template (TNT) EMFs, which consist of a trimetallic nitride cluster and a host fullerene cage. The TNT-EMFs (A₃N@C2n, n = 34-55, A = Sc, Y, or lanthanides) are typically formed in relatively high yields (sometimes only exceeded by empty-cage C₆₀ and C₇₀, but yields may decrease with increasing TNT cluster size), and exhibit high chemical and thermal stability. In this Account, we give an overview of TNT-EMF research, starting with the discovery of these structures and then describing their synthesis and applications. First, we describe our serendipitous discovery of the first member of this class, Sc₃N@Ih-C₈₀. Second, we discuss the methodology for the synthesis of several TNT-EMFs. These results emphasize the importance of chemically adjusting plasma temperature, energy, and reactivity (CAPTEAR) to optimize the type and yield of TNT-EMFs produced. Third, we review the approaches that are used to separate and purify pristine TNT-EMF molecules from their corresponding product mixtures. Although we used high-performance liquid chromatography (HPLC) to separate TNT-EMFs in early studies, we have more recently achieved facile separation based on the reduced chemical reactivity of the TNT-EMFs. These improved production yields and

  1. Integrated spectral study of small angular diameter galactic open clusters

    Science.gov (United States)

    Clariá, J. J.; Ahumada, A. V.; Bica, E.; Pavani, D. B.; Parisi, M. C.

    2017-10-01

    This paper presents flux-calibrated integrated spectra obtained at Complejo Astronómico El Leoncito (CASLEO, Argentina) for a sample of 9 Galactic open clusters of small angular diameter. The spectra cover the optical range (3800-6800 Å), with a resolution of ∼14 Å. With one exception (Ruprecht 158), the selected clusters are projected into the fourth Galactic quadrant (282o age by comparing the continuum distribution and line strenghts of the cluster spectra with those of template cluster spectra with known parameters. We thus provide spectroscopic information independent from that derived through color-magnitude diagram studies. We found three clusters (Collinder 249, NGC 4463 and Ruprecht 122) younger than ∼40 Myr, four moderately young ones (BH 92, Harvard 5, Hogg 14 and Pismis 23) with ages within 200-400 Myr, and two intermediate-age ones (Ruprecht 158 and ESO 065-SC07) with ages within 1.0-2.2 Gyr. The derived foreground E(B - V) color excesses vary from around 0.0 in Ruprecht 158 to ∼1.1 in Pismis 23. In general terms, the results obtained show good agreement with previous photometric results. In Ruprecht 158 and BH 92, however, some differences are found between the parameters here obtained and previous values in the literature. Individual spectra of some comparatively bright stars located in the fields of 5 out of the 9 clusters here studied, allowed us to evaluate their membership status. The current cluster sample complements that of 46 open clusters previously studied by our group in an effort to gather a spectral library with several clusters per age bin. The cluster spectral library that we have been building is an important tool to tie studies of resolved and unresolved stellar content.

  2. Quantum interference device made by DNA templating of superconducting nanowires.

    Science.gov (United States)

    Hopkins, David S; Pekker, David; Goldbart, Paul M; Bezryadin, Alexey

    2005-06-17

    The application of single molecules as templates for nanodevices is a promising direction for nanotechnology. We used a pair of suspended DNA molecules as templates for superconducting two-nanowire devices. Because the resulting wires are very thin, comparable to the DNA molecules themselves, they are susceptible to thermal fluctuations typical for one-dimensional superconductors and exhibit a nonzero resistance over a broad temperature range. We observed resistance oscillations in these two-nanowire structures that are different from the usual Little-Parks oscillations. Here, we provide a quantitative explanation for the observed quantum interference phenomenon, which takes into account strong phase gradients created in the leads by the applied magnetic field.

  3. Computer-aided modeling framework – a generic modeling template

    DEFF Research Database (Denmark)

    Fedorova, Marina; Sin, Gürkan; Gani, Rafiqul

    This work focuses on the development of a computer-aided modeling framework. The framework is a knowledge-based system that is built on a generic modeling language and structured on workflows for different modeling tasks. The overall objective is to support model developers and users to generate...... and test models systematically, efficiently and reliably. In this way, development of products and processes can be made faster, cheaper and more efficient. In this contribution, as part of the framework, a generic modeling template for the systematic derivation of problem specific models is presented....... The application of the modeling template is highlighted with a case study related to the modeling of a catalytic membrane reactor coupling dehydrogenation of ethylbenzene with hydrogenation of nitrobenzene...

  4. Interstitial irradiation of rectal carcinoma with rectal template

    Energy Technology Data Exchange (ETDEWEB)

    Ikeda, Hiroshi; Nishiyama, Kinji; Tanaka, Ken; Nakanishi, Makoto; Inoue, Takehiro (Osaka Univ. (Japan). Faculty of Medicine)

    1984-06-01

    Using Iridium-192 wires through a rectal template after Syed, interstitial brachytherapy was conducted in a patient with inoperable adenocarcinoma of the rectum. A 67-year-old man with constipation and change in the stool caliber underwent external radiotherapy (4,000cGy/4W) to the whole pelvis including the perineum, followed by interstitial implant using a template, at the Department of Radiology, Osaka University Hospital. Marked tumor regression, marked circumferential fibrosis and a remarkable decline of CEA titers (pre-RT: 35.8ng/ml, post-RT: 6.2ng/ml) were observed until 7 months post-RT. The domestic production of Iridium-192 wires has made possible the intergrated use of brachytherapy in the perineal region in Japan.

  5. Double-sided porous silicon as template for metal deposition

    Energy Technology Data Exchange (ETDEWEB)

    Rumpf, Klemens; Granitzer, Petra [Institute of Physics, Karl-Franzens-University Graz (Austria); Poelt, Peter; Albu, Mihaela [Institute for Electron Microscopy, University of Technology Graz (Austria)

    2011-06-15

    Mesoporous silicon, achieved by etching of a highly n-doped wafer is used as template for electrochemical metal deposition. The fabrication of porous silicon samples with a porous layer on each side is performed in a double tank electrolytic cell in applying a pulsed current with a frequency of typically 0.1 Hz. Ferromagnetic metals such as Ni and Co are deposited into the pores of the matrices, either the same metal on both sides of the sample, a different metal on each side or an alloy of both. As substrate material also ultrathin silicon wafers with an average thickness of 60 {mu}m are used to achieve a thickness as small as possible of the remaining bulk silicon in between the two porous layers. These fragile templates are also filled with transition metals and investigated magnetically. (copyright 2011 WILEY-VCH Verlag GmbH and Co. KGaA, Weinheim) (orig.)

  6. Rapid earthquake detection through GPU-Based template matching

    Science.gov (United States)

    Mu, Dawei; Lee, En-Jui; Chen, Po

    2017-12-01

    The template-matching algorithm (TMA) has been widely adopted for improving the reliability of earthquake detection. The TMA is based on calculating the normalized cross-correlation coefficient (NCC) between a collection of selected template waveforms and the continuous waveform recordings of seismic instruments. In realistic applications, the computational cost of the TMA is much higher than that of traditional techniques. In this study, we provide an analysis of the TMA and show how the GPU architecture provides an almost ideal environment for accelerating the TMA and NCC-based pattern recognition algorithms in general. So far, our best-performing GPU code has achieved a speedup factor of more than 800 with respect to a common sequential CPU code. We demonstrate the performance of our GPU code using seismic waveform recordings from the ML 6.6 Meinong earthquake sequence in Taiwan.

  7. Fabrication of Nanostructures Using Self-Assembled Peptides as Templates

    DEFF Research Database (Denmark)

    Castillo, Jaime

    2015-01-01

    This chapter evaluates the use of a short-aromatic dipeptide, diphenylalanine, as a template in the fabrication of new nanostructures (nanowires, coaxial nanocables, nanochannels) using materials such as silicon, conducting and non-conducting polymers. Diphenylalanine self-organize into nanostruc......This chapter evaluates the use of a short-aromatic dipeptide, diphenylalanine, as a template in the fabrication of new nanostructures (nanowires, coaxial nanocables, nanochannels) using materials such as silicon, conducting and non-conducting polymers. Diphenylalanine self......-organize into nanostructures (nanotubes, nanofibers or nanospheres) under very mild conditions; some of its properties make them excellent candidates to be use as, for instance, dry-etch masks in a reactive ion etching process for the rapid fabrication of silicon micro and nanowires. Here, the methods used to exploit...

  8. Cluster analysis for applications

    CERN Document Server

    Anderberg, Michael R

    1973-01-01

    Cluster Analysis for Applications deals with methods and various applications of cluster analysis. Topics covered range from variables and scales to measures of association among variables and among data units. Conceptual problems in cluster analysis are discussed, along with hierarchical and non-hierarchical clustering methods. The necessary elements of data analysis, statistics, cluster analysis, and computer implementation are integrated vertically to cover the complete path from raw data to a finished analysis.Comprised of 10 chapters, this book begins with an introduction to the subject o

  9. Facile template-free hydrothermal synthesis and microstrain ...

    Indian Academy of Sciences (India)

    Administrator

    Abstract. ZnO nanorods were synthesized at low temperature by hydrothermally heating 0⋅1 M solution of. ZnCl2 for 5, 10 and 15 h at a pH of 10. No template, seeded substrate, catalyst and autoclave were employed for the synthesis of ZnO nanorods. The effect of heating durations on the morphology and crystal ...

  10. A Framework for Analyzing Biometric Template Aging and Renewal Prediction

    Science.gov (United States)

    2009-03-01

    biometrics that has a paucity of research is template aging and the adult age-progression, particularly facial aging. This dissertation presents a...growth. The transformation formula models a growth pattern and ratios of expansion on the craniofacial regions from adolescence to adult [RaC06a...based facial recognition technologies. Both algorithms/SDKs are camera independent, webcam capable and offer a set of programming samples and

  11. Facile template-free hydrothermal synthesis and microstrain ...

    Indian Academy of Sciences (India)

    ZnO nanorods were synthesized at low temperature by hydrothermally heating 0.1 M solution of ZnCl2 for 5, 10 and 15 h at a pH of 10. No template, seeded substrate, catalyst and autoclave were employed for the synthesis of ZnO nanorods. The effect of heating durations on the morphology and crystal orientation of the ...

  12. Synthesis and characterization of diblock copolymer templated iron oxide nanoparticles

    Science.gov (United States)

    Akcora, Pinar

    2005-07-01

    Templating ordered assemblies of magnetic oxide nanoparticles within self-assembled diblock copolymers of varying morphologies is an important problem with a wide applicability such as in electromagnetics, optical devices, metal catalysts, medicine and biology. In this thesis, the effects of different polymer structures on particle ordering and resultant magnetic properties have been investigated using various microstructure and magnetic characterization tools. Ring-opening metathesis polymerization (ROMP) of norbornene and functionalized norbornene monomers has been used to synthesize diblock copolymers of narrow polydispersities using Grubbs' catalyst. These block copolymers can be used as templates to form inorganic nanoparticles. In this research, the structural and physical understanding of the inorganic-copolymer system was studied by small-angle neutron and x-ray scattering techniques and transmission electron microscopy. Synthesis of gamma-Fe2O3 nanoparticles has been achieved within novel block copolymers of (norbornene)-b-(deuterated norbornene dicarboxylic) acid and (norbornene methanol-(norbornene dicarboxylic acid). The polymer morphologies were controlled by varying the volume fractions of the constituent blocks. The pure norbornene based diblock copolymer morphologies were demonstrated by electron microscopy for the first tune. Spherical, cylindrical and lamellar morphologies of these novel diblock copolymers were reported. The block ratios of the synthesized polymers were determined using gel permeation chromatography-light scattering, elemental analysis and UV-VIS spectroscopy. Solution phase doping and submersion of thin films in metal salt solutions were employed as metal doping methods and the observed nanoparticle structures were compared to those of the undoped copolymer morphologies. This project reports on the types of templating structures and dispersion of the nanoparticles. The effects of particle, interactions on the microphase

  13. Template preparation for rapid PCR in Colletotrichum lindemuthianum

    Directory of Open Access Journals (Sweden)

    Roca M. Gabriela

    2003-01-01

    Full Text Available Isolation of DNA for PCR is time-consuming and involves many reagents. The aim of this work was to optimise a rapid and easy PCR methodology without previous DNA isolation. Different strains of the phytopathogenic fungus Colletotrichum lindemuthianum were used. Protoplasts were generated using lytic enzymes under high incubation temperatures using different methodologies to obtain the template. A rapid (10 minute methodology was successful for smaller amplicons (<750 bp.

  14. Recycling of surfactant template in mesoporous MCM-41 synthesis

    Science.gov (United States)

    Lai, J. Y.; Twaiq, F.; Ngu, L. H.

    2017-06-01

    The recycling of surfactant template is investigated through the reuse of the surfactant template in the mesoporous MCM-41 synthesis process. In the synthesis of MCM-41, tetraethylorthosilicate (TEOS) solution in water was utilized as the silica source while hexadecyltrimethylammonium bromide (CTAB) solution in ethyl alcohol was used as a surfactant template. The synthesized gel is formed thoroughly by mixing the two solutions under acid conditions with a pH value of 0.5 for 1 hour and kept for crystallization for 48 hours. The as-synthesized MCM-41 powder is recovered by filtration while the filtrate (mother liquor) was then reused for the second synthesis cycle. The synthesis procedure was repeated till no further solid product was formed. The synthesized gel was not produced in the unifying solution in the fifth cycle of MCM-41 synthesis. The quality of the calcined MCM-41 powder produced in each synthesis cycle was evaluated by calculating the amount of MCM-41 produced and the surface area of the powder product. The result showed that 1.28, 0.37, 1.64, 1.90 and 0.037 g were obtained in the 1st, 2nd, 3rd, 4th and 5th synthesis cycle, respectively. The surface area of the powder produced was found to be 1170, 916, 728, and 508 m2/g for 1st, 2nd, 3rd and 4th respectively. The concentration of the surfactant template has reached value lower than the critical micelle concentration (CMC) and remained constant after the 4th cycle. There was no further formation of gel due to low availability in the interaction between silicate anions and surfactant cations when the amount of TEOS was fixed for every synthesis cycle.

  15. Shot Noise Thermometry for Thermal Characterization of Templated Carbon Nanotubes

    OpenAIRE

    Sayer, Robert A; Kim, Sunkook; Franklin, Aaron D; Mohammadi, Saeed; Fisher, Timothy

    2010-01-01

    A carbon nanotube (CNT) thermometer that operates on the principles of electrical shot noise is reported. Shot noise thermometry is a self-calibrating measurement technique that relates statistical fluctuations in dc current across a device to temperature. A structure consisting of vertical, top, and bottom-contacted single-walled carbon nanotubes in a porous anodic alumina template was fabricated and used to measure shot noise. Frequencies between 60 and 100 kHz were observed to preclude sig...

  16. Standardized ultrasound templates for diagnosing appendicitis reduce annual imaging costs.

    Science.gov (United States)

    Nordin, Andrew B; Sales, Stephen; Nielsen, Jason W; Adler, Brent; Bates, David Gregory; Kenney, Brian

    2018-01-01

    Ultrasound is preferred over computed tomography (CT) for diagnosing appendicitis in children to avoid undue radiation exposure. We previously reported our experience in instituting a standardized appendicitis ultrasound template, which decreased CT rates by 67.3%. In this analysis, we demonstrate the ongoing cost savings associated with using this template. Retrospective chart review for the time period preceding template implementation (June 2012-September 2012) was combined with prospective review through December 2015 for all patients in the emergency department receiving diagnostic imaging for appendicitis. The type of imaging was recorded, and imaging rates and ultrasound test statistics were calculated. Estimated annual imaging costs based on pretemplate ultrasound and CT utilization rates were compared with post-template annual costs to calculate annual and cumulative savings. In the pretemplate period, ultrasound and CT rates were 80.2% and 44.3%, respectively, resulting in a combined annual cost of $300,527.70. Similar calculations were performed for each succeeding year, accounting for changes in patient volume. Using pretemplate rates, our projected 2015 imaging cost was $371,402.86; however, our ultrasound rate had increased to 98.3%, whereas the CT rate declined to 9.6%, yielding an annual estimated cost of $224,853.00 and a savings of $146,549.86. Since implementation, annual savings have steadily increased for a cumulative cost savings of $336,683.83. Standardizing ultrasound reports for appendicitis not only reduces the use of CT scans and the associated radiation exposure but also decreases annual imaging costs despite increased numbers of imaging studies. Continued cost reduction may be possible by using diagnostic algorithms. Copyright © 2017 Elsevier Inc. All rights reserved.

  17. SnapDock-template-based docking by Geometric Hashing.

    Science.gov (United States)

    Estrin, Michael; Wolfson, Haim J

    2017-07-15

    A highly efficient template-based protein-protein docking algorithm, nicknamed SnapDock, is presented. It employs a Geometric Hashing-based structural alignment scheme to align the target proteins to the interfaces of non-redundant protein-protein interface libraries. Docking of a pair of proteins utilizing the 22 600 interface PIFACE library is performed in gmail.com or wolfson@tau.ac.il.

  18. Customized Digital Case Presentation Template in Microsoft Word 2007

    OpenAIRE

    P G Makhija; Anup Belludi; Amit Bhardwaj; Virag Bhatia; Madhur Navlani; Geetika Tomar

    2013-01-01

    Introduction : In today′s era of digital orthodontics, digital communication and presentation skills require regular updating. Case presentation and patient communication require an effort to manipulate digital records to be put in the unique digital case presentation format which is custom-made to fulfill one′s own or institutional requirement. These digital templates can easily be made in Microsoft Word 2007 and then can be printed on suitable paper for permanent records. Problem: This m...

  19. Metal-organic framework templated electrodeposition of functional gold nanostructures

    OpenAIRE

    Worrall, Stephen D.; Bissett, Mark A.; Hill, Patrick I.; Rooney, Aidan. P.; Haigh, Sarah J.; Attfield, Martin P.; Dryfe, Robert A. W.

    2016-01-01

    Utilizing a pair of quick, scalable electrochemical processes, the permanently porous MOF HKUST-1 was electrochemically grown on a copper electrode and this HKUST-1-coated electrode was used to template electrodeposition of a gold nanostructure within the pore network of the MOF. Transmission electron microscopy demonstrates that a proportion of the gold nanostructures exhibit structural features replicating the pore space of this ~1.4 nm maximum pore diameter MOF, as well as regions that are...

  20. Multifunctional Graphene/Platinum/Nafion Hybrids via Ice Templating

    KAUST Repository

    Estevez, Luis

    2011-04-27

    We report the synthesis of multifunctional hybrids in both films and bulk form, combining electrical and ionic conductivity with porosity and catalytic activity. The hybrids are synthesized by a two-step process: (a) ice templation of an aqueous suspension comprised of Nafion, graphite oxide, and chloroplatinic acid to form a microcellular porous network and (b) mild reduction in hydrazine or monosodium citrate which leads to graphene-supported Pt nanoparticles on a Nafion scaffold. © 2011 American Chemical Society.

  1. Biomolecular templating of functional hybrid nanostructures using repeat protein scaffolds.

    Science.gov (United States)

    Romera, David; Couleaud, Pierre; Mejias, Sara H; Aires, Antonio; Cortajarena, Aitziber L

    2015-10-01

    The precise synthesis of materials and devices with tailored complex structures and properties is a requisite for the development of the next generation of products based on nanotechnology. Nowadays, the technology for the generation of this type of devices lacks the precision to determine their properties and is accomplished mostly by 'trial and error' experimental approaches. The use of bottom-up approaches that rely on highly specific biomolecular interactions of small and simple components is an attractive approach for the templating of nanoscale elements. In nature, protein assemblies define complex structures and functions. Engineering novel bio-inspired assemblies by exploiting the same rules and interactions that encode the natural diversity is an emerging field that opens the door to create nanostructures with numerous potential applications in synthetic biology and nanotechnology. Self-assembly of biological molecules into defined functional structures has a tremendous potential in nano-patterning and the design of novel materials and functional devices. Molecular self-assembly is a process by which complex 3D structures with specified functions are constructed from simple molecular building blocks. Here we discuss the basis of biomolecular templating, the great potential of repeat proteins as building blocks for biomolecular templating and nano-patterning. In particular, we focus on the designed consensus tetratricopeptide repeats (CTPRs), the control on the assembly of these proteins into higher order structures and their potential as building blocks in order to generate functional nanostructures and materials. © 2015 Authors; published by Portland Press Limited.

  2. Chitosan as template for the synthesis of ceria nanoparticles

    Energy Technology Data Exchange (ETDEWEB)

    Sifontes, A.B., E-mail: asifonte@ivic.gob.ve [Centro de Quimica, Instituto Venezolano de Investigaciones Cientificas, Caracas 1020-A (Venezuela, Bolivarian Republic of); Gonzalez, G.; Ochoa, J.L. [Centro de Ingenieria, Instituto Venezolano de Investigaciones Cientificas, Caracas 1020-A (Venezuela, Bolivarian Republic of); Tovar, L.M.; Zoltan, T. [Centro de Quimica, Instituto Venezolano de Investigaciones Cientificas, Caracas 1020-A (Venezuela, Bolivarian Republic of); Canizales, E. [PDVSA, Intevep, Caracas 1020-A (Venezuela, Bolivarian Republic of)

    2011-11-15

    Graphical abstract: Cerium oxide nanoparticles with cubic fluorite structure were prepared using chitosan as template, cerium nitrate as a starting material and sodium hydroxide as a precipitating agent. Calcinated powders at 350 {sup o}C contain agglomerated particles with average particle size of {approx}4 nm, very high porosity and foam-like morphology formed by open and close pores. Highlights: {yields} Pure CeO{sub 2} nanoparticles can take place using chitosan as template. {yields} A porous material was obtained. {yields} Blueshifts in the ultraviolet absorption spectra have been observed in cerium oxide nanocrystallites. -- Abstract: Cerium oxide (CeO{sub 2}), nanoparticles were prepared using chitosan as template, cerium nitrate as a starting material and sodium hydroxide as a precipitating agent. The resultant ceria-chitosan spheres were calcined at 350 {sup o}C. The synthesized powders were characterized by, XRD, HRTEM, UV-vis, FTIR, and TG-DTA. The average size of the nanoparticles obtained was {approx}4 nm and BET specific surface area {approx}105 m{sup 2} g{sup -1}. Blueshifts in the ultraviolet absorption spectra have been observed in cerium oxide nanocrystallites. The band-gap was found to be 4.5 eV. The blueshifts are well explained for diameters down to less than a few nanometers by the change in the electronic band structure.

  3. TEMPLATE-ASSISTED FABRICATION AND DIELECTROPHORETIC MANIPULATION OF PZT MICROTUBES

    Directory of Open Access Journals (Sweden)

    VLADIMÍR KOVAĽ

    2012-09-01

    Full Text Available Mesoscopic high aspect ratio ferroelectric tube structures of a diverse range of compositions with tailored physical properties can be used as key components in miniaturized flexible electronics, nano- and micro-electro-mechanical systems, nonvolatile FeRAM memories, and tunable photonic applications. They are usually produced through advanced “bottom-up” or “topdown” fabrication techniques. In this study, a template wetting approach is employed for fabrication of Pb(Zr0.52Ti0.48O3 (PZT microtubes. The method is based on repeated infiltration of precursor solution into macroporous silicon (Si templates at a sub-atmospheric pressure. Prior to crystallization at 750°C, free-standing tubes of a 2-μm outer diameter, extending to over 30 μm in length were released from the Si template using a selective isotropic-pulsed XeF2 reactive ion etching. To facilitate rapid electrical characterization and enable future integration process, directed positioning and aligning of the PZT tubes was performed by dielectrophoresis. The electric field-assisted technique involves an alternating electric voltage that is applied through pre-patterned microelectrodes to a colloidal suspension of PZT tubes dispersed in isopropyl alcohol. The most efficient biasing for the assembly of tubes across the electrode gap of 12 μm was a square wave signal of 5 Vrms and 10 Hz. By varying the applied frequency in between 1 and 10 Hz, an enhancement in tube alignment was obtained.

  4. Synthesis and catalytic activity of polysaccharide templated nanocrystalline sulfated zirconia

    Energy Technology Data Exchange (ETDEWEB)

    Sherly, K. B.; Rakesh, K. [Mahatma Gandhi University Regional Research Center in Chemistry, Department of Chemistry, Mar Athanasius College, Kothamangalam-686666, Kerala (India)

    2014-01-28

    Nanoscaled materials are of great interest due to their unique enhanced optical, electrical and magnetic properties. Sulfate-promoted zirconia has been shown to exhibit super acidic behavior and high activity for acid catalyzed reactions. Nanocrystalline zirconia was prepared in the presence of polysaccharide template by interaction between ZrOCl{sub 2}⋅8H{sub 2}O and chitosan template. The interaction was carried out in aqueous phase, followed by the removal of templates by calcination at optimum temperature and sulfation. The structural and textural features were characterized by powder XRD, TG, SEM and TEM. XRD patterns showed the peaks of the diffractogram were in agreement with the theoretical data of zirconia with the catalytically active tetragonal phase and average crystalline size of the particles was found to be 9 nm, which was confirmed by TEM. TPD using ammonia as probe, FTIR and BET surface area analysis were used for analyzing surface features like acidity and porosity. The BET surface area analysis showed the sample had moderately high surface area. FTIR was used to find the type species attached to the surface of zirconia. UV-DRS found the band gap of the zirconia was found to be 2.8 eV. The benzylation of o-xylene was carried out batchwise in atmospheric pressure and 433K temperature using sulfated zirconia as catalyst.

  5. Improved PCR Amplification of Broad Spectrum GC DNA Templates.

    Science.gov (United States)

    Guido, Nicholas; Starostina, Elena; Leake, Devin; Saaem, Ishtiaq

    2016-01-01

    Many applications in molecular biology can benefit from improved PCR amplification of DNA segments containing a wide range of GC content. Conventional PCR amplification of DNA sequences with regions of GC less than 30%, or higher than 70%, is complex due to secondary structures that block the DNA polymerase as well as mispriming and mis-annealing of the DNA. This complexity will often generate incomplete or nonspecific products that hamper downstream applications. In this study, we address multiplexed PCR amplification of DNA segments containing a wide range of GC content. In order to mitigate amplification complications due to high or low GC regions, we tested a combination of different PCR cycling conditions and chemical additives. To assess the fate of specific oligonucleotide (oligo) species with varying GC content in a multiplexed PCR, we developed a novel method of sequence analysis. Here we show that subcycling during the amplification process significantly improved amplification of short template pools (~200 bp), particularly when the template contained a low percent of GC. Furthermore, the combination of subcycling and 7-deaza-dGTP achieved efficient amplification of short templates ranging from 10-90% GC composition. Moreover, we found that 7-deaza-dGTP improved the amplification of longer products (~1000 bp). These methods provide an updated approach for PCR amplification of DNA segments containing a broad range of GC content.

  6. Telomerase RNA is more than a DNA template.

    Science.gov (United States)

    Webb, Christopher J; Zakian, Virginia A

    2016-08-02

    The addition of telomeric DNA to chromosome ends is an essential cellular activity that compensates for the loss of genomic DNA that is due to the inability of the conventional DNA replication apparatus to duplicate the entire chromosome. The telomerase reverse transcriptase and its associated RNA bind to the very end of the telomere via a sequence in the RNA and specific protein-protein interactions. Telomerase RNA also provides the template for addition of new telomeric repeats by the reverse-transcriptase protein subunit. In addition to the template, there are 3 other conserved regions in telomerase RNA that are essential for normal telomerase activity. Here we briefly review the conserved core regions of telomerase RNA and then focus on a recent study in fission yeast that determined the function of another conserved region in telomerase RNA called the Stem Terminus Element (STE). (1) The STE is distant from the templating core of telomerase in both the linear and RNA secondary structure, but, nonetheless, affects the fidelity of telomere sequence addition and, in turn, the ability of telomere binding proteins to bind and protect chromosome ends. We will discuss possible mechanisms of STE action and the suitability of the STE as an anti-cancer target.

  7. Space charge templates for high-current beam modeling

    Energy Technology Data Exchange (ETDEWEB)

    Vorobiev, Leonid G.; /Fermilab

    2008-07-01

    A computational method to evaluate space charge potential and gradients of charged particle beam in the presence of conducting boundaries, has been introduced. The three-dimensional (3D) field of the beam can be derived as a convolution of macro Green's functions (template fields), satisfying the same boundary conditions, as the original beam. Numerical experiments gave a confidence that space charge effects can be modeled by templates with enough accuracy and generality within dramatically faster computational times than standard combination: a grid density + Poisson solvers, realized in the most of Particle in Cell codes. The achieved rapidity may significantly broaden the high-current beam design space, making the optimization in automatic mode possible, which so far was only feasible for simplest self-field formulations such as rms envelope equations. The template technique may be used as a standalone program, or as an optional field solver in existing beam dynamics codes both in one-passage structures and in rings.

  8. Secure Minutiae-Based Fingerprint Templates Using Random Triangle Hashing

    Science.gov (United States)

    Jin, Zhe; Jin Teoh, Andrew Beng; Ong, Thian Song; Tee, Connie

    Due to privacy concern on the widespread use of biometric authentication systems, biometric template protection has gained great attention in the biometric research recently. It is a challenging task to design a biometric template protection scheme which is anonymous, revocable and noninvertible while maintaining acceptable performance. Many methods have been proposed to resolve this problem, and cancelable biometrics is one of them. In this paper, we propose a scheme coined as Random Triangle Hashing which follows the concept of cancelable biometrics in the fingerprint domain. In this method, re-alignment of fingerprints is not required as all the minutiae are translated into a pre-defined 2 dimensional space based on a reference minutia. After that, the proposed Random Triangle hashing method is used to enforce the one-way property (non-invertibility) of the biometric template. The proposed method is resistant to minor translation error and rotation distortion. Finally, the hash vectors are converted into bit-strings to be stored in the database. The proposed method is evaluated using the public database FVC2004 DB1. An EER of less than 1% is achieved by using the proposed method.

  9. Expected net gain data of low-template DNA analyses

    Directory of Open Access Journals (Sweden)

    Simone Gittelson

    2016-09-01

    Full Text Available Low-template DNA analyses are affected by stochastic effects which can produce a configuration of peaks in the electropherogram (EPG that is different from the genotype of the DNA׳s donor. A probabilistic and decision-theoretic model can quantify the expected net gain (ENG of performing a DNA analysis by the difference between the expected value of information (EVOI and the cost of performing the analysis. This article presents data on the ENG of performing DNA analyses of low-template DNA for a single amplification, two replicate amplifications, and for a second replicate amplification given the result of a first analysis. The data were obtained using amplification kits AmpFlSTR Identifiler Plus and Promega׳s PowerPlex 16 HS, an ABI 3130xl genetic sequencer, and Applied Biosystem׳s GeneMapper ID-X software. These data are supplementary to an original research article investigating whether a forensic DNA analyst should perform a single DNA analysis or two replicate analyses from a decision-theoretic point of view, entitled “Low-template DNA: a single DNA analysis or two replicates?” (Gittelson et al., 2016 [1].

  10. Faster rates with less catalyst in template-directed reactions

    Science.gov (United States)

    Kanavarioti, A.; Baird, E. E.

    1995-01-01

    We have recently shown that the polycytidylic acid-directed polymerization of guanosine 5'-monophosphate 2-methylimidazolide (2-MeImpG) is amenable to kinetic study and that rate determinations as a function of 2-MeImpG concentration can reveal much mechanistic detail (Kanavarioti et al. 1993). Here we report kinetic data which show that, once the reaction has been initiated by the formation of dimers, the elongation of dimers to form longer oligomers is accelerated by decreasing polycytidylate (poly(C)) concentration from 0.05 to 0.002 M. This result is consistent with the previously proposed mechanism. The increase in the observed pseudo-first order rate constant for formation of the trimer, k3', and the corresponding constant for formation of oligomers longer than the trimer, ki' (ki' is independent of oligomer length for i > or = 4), with decreasing template concentration for a given monomer concentration is attributed to an increase in template occupancy as template concentration is reduced.

  11. Templates for Fabricating Nanowire/Nanoconduit-Based Devices

    Science.gov (United States)

    Sakamoto, Jeffrey; Holt, Todd; Welker, David

    2006-01-01

    An effort is underway to develop processes for making templates that could be used as deposition molds and etching masks in the fabrication of devices containing arrays of nanowires and/or nanoconduits. Highly-ordered, optical-fiber arrays consisting of dissimilar polymers comprise the template technology. The selective removal of the fiber cores in specific solvents creates the porous templates to be filled with a "top-down" deposition process such as electrochemical deposition, sputter deposition, molecular beam epitaxy, and the like. Typically, the fiber bundles consist of polystyrene (PS) fiber cores, which are clad with varying thickness poly(methyl methacrylate) (PMMA). When arranged in hexagonal, close-packed configuration and pulled, the fibers form highly-ordered arrays comprised of PS fiber cores surrounded by a continuous matrix of PMMA. The ratio of PMMA cladding thickness to PS core diameter determines the spacing between PS fiber cores and typically ranges from 3:1 to 1:1. Essentially, the simultaneous heating and drawing or pulling in the longitudinal direction of polymer-fiber arrays fuses the fibers together.

  12. Templating for hierarchical structure control in carbon materials.

    Science.gov (United States)

    Schrettl, Stephen; Schulte, Bjoern; Frauenrath, Holger

    2016-12-07

    Carbon-based materials show a remarkable variety of physical properties. For this reason, they have recently been explored for many advanced applications and emerging technologies. In the absence of actual "chemical" functionalities in these materials, tailoring these physical properties requires control on all levels of the structural hierarchy, from the atomic structure (carbon connectivity, defects, impurities), to the supramolecular level (domain orientations), nanoscopic length scale (domain sizes, porosity), microscopic structure (morphology), and macroscopic aspects (shape, surface chemistry). When preparing carbon materials, all these features can be tailored through the use of hard, soft, or molecular templates. Based on such templating approaches or through their combination, tremendous progress towards hierarchically structured carbon materials has recently been accomplished. Novel carbon nanomaterials such as brick-walled carbon tubes, carbon nanotube forests, coral-like carbon monoliths, or functional carbon nanosheets have become available, some of which exhibit unusual combinations of electronic, mechanical, and chemical properties. This review aims to discuss how the different templating approaches allow the control of structure formation on various length scales, how hierarchical structure formation can be realized, and which challenges remain, such as the detailed control over the carbon connectivity or the surface chemistry.

  13. Spatial cluster modelling

    CERN Document Server

    Lawson, Andrew B

    2002-01-01

    Research has generated a number of advances in methods for spatial cluster modelling in recent years, particularly in the area of Bayesian cluster modelling. Along with these advances has come an explosion of interest in the potential applications of this work, especially in epidemiology and genome research. In one integrated volume, this book reviews the state-of-the-art in spatial clustering and spatial cluster modelling, bringing together research and applications previously scattered throughout the literature. It begins with an overview of the field, then presents a series of chapters that illuminate the nature and purpose of cluster modelling within different application areas, including astrophysics, epidemiology, ecology, and imaging. The focus then shifts to methods, with discussions on point and object process modelling, perfect sampling of cluster processes, partitioning in space and space-time, spatial and spatio-temporal process modelling, nonparametric methods for clustering, and spatio-temporal ...

  14. Modeling Clustered Data with Very Few Clusters.

    Science.gov (United States)

    McNeish, Daniel; Stapleton, Laura M

    2016-01-01

    Small-sample inference with clustered data has received increased attention recently in the methodological literature, with several simulation studies being presented on the small-sample behavior of many methods. However, nearly all previous studies focus on a single class of methods (e.g., only multilevel models, only corrections to sandwich estimators), and the differential performance of various methods that can be implemented to accommodate clustered data with very few clusters is largely unknown, potentially due to the rigid disciplinary preferences. Furthermore, a majority of these studies focus on scenarios with 15 or more clusters and feature unrealistically simple data-generation models with very few predictors. This article, motivated by an applied educational psychology cluster randomized trial, presents a simulation study that simultaneously addresses the extreme small sample and differential performance (estimation bias, Type I error rates, and relative power) of 12 methods to account for clustered data with a model that features a more realistic number of predictors. The motivating data are then modeled with each method, and results are compared. Results show that generalized estimating equations perform poorly; the choice of Bayesian prior distributions affects performance; and fixed effect models perform quite well. Limitations and implications for applications are also discussed.

  15. Clusters and how to make it work : Cluster strategy toolkit

    NARCIS (Netherlands)

    Anu Manickam; Karel van Berkel

    2014-01-01

    Clusters are the magic answer to regional economic development. Firms in clusters are more innovative; cluster policy dominates EU policy; ‘top-sectors’ and excellence are the choice of national policy makers; clusters are ‘in’. But, clusters are complex, clusters are ‘messy’; there is no clear

  16. Looking sharp: Becoming a search template boosts precision and stability in visual working memory.

    Science.gov (United States)

    Rajsic, Jason; Ouslis, Natasha E; Wilson, Daryl E; Pratt, Jay

    2017-08-01

    Visual working memory (VWM) plays a central role in visual cognition, and current work suggests that there is a special state in VWM for items that are the goal of visual searches. However, whether the quality of memory for target templates differs from memory for other items in VWM is currently unknown. In this study, we measured the precision and stability of memory for search templates and accessory items to determine whether search templates receive representational priority in VWM. Memory for search templates exhibited increased precision and probability of recall, whereas accessory items were remembered less often. Additionally, while memory for Templates showed benefits when instances of the Template appeared in search, this benefit was not consistently observed for Accessory items when they appeared in search. Our results show that becoming a search template can substantially affect the quality of a representation in VWM.

  17. Dopamine-Imprinted Polymers: Template-Monomer Interactions, Analysis of Template Removal and Application to Solid Phase Extraction

    Directory of Open Access Journals (Sweden)

    Mirosław Szutowski

    2007-11-01

    Full Text Available A dopamine-imprinted polymer (MIP was prepared in aqueous methanolsolution at 60oC by free-radical cross-linking polymerization of methacrylic acid in thepresence of ethylene glycol dimethacrylate as the cross-linker and dopamine hydrochlorideas the template molecule. Its ability to isolate dopamine was evaluated as the basis of asolid phase extraction procedure and compared with that of a non-imprinted polymer(NIP. The binding of dopamine was 84.1% and 29.1% for MIP and NIP, respectively.Various reported post-polymerization treatments to reduce template bleeding wereexamined. In our case the lowest bleeding was achieved after applying a combinedprocedure: continuous extraction in a Soxhlet apparatus (CE, followed by microwave-assisted extraction (ME to a level of 0.061 μg/mL. A simplified model of the template-monomer complexes allowed rationalization of monomer choice based on the heats ofcomplex formation at a PM3 level of theory.

  18. Open source clustering software.

    Science.gov (United States)

    de Hoon, M J L; Imoto, S; Nolan, J; Miyano, S

    2004-06-12

    We have implemented k-means clustering, hierarchical clustering and self-organizing maps in a single multipurpose open-source library of C routines, callable from other C and C++ programs. Using this library, we have created an improved version of Michael Eisen's well-known Cluster program for Windows, Mac OS X and Linux/Unix. In addition, we generated a Python and a Perl interface to the C Clustering Library, thereby combining the flexibility of a scripting language with the speed of C. The C Clustering Library and the corresponding Python C extension module Pycluster were released under the Python License, while the Perl module Algorithm::Cluster was released under the Artistic License. The GUI code Cluster 3.0 for Windows, Macintosh and Linux/Unix, as well as the corresponding command-line program, were released under the same license as the original Cluster code. The complete source code is available at http://bonsai.ims.u-tokyo.ac.jp/mdehoon/software/cluster. Alternatively, Algorithm::Cluster can be downloaded from CPAN, while Pycluster is also available as part of the Biopython distribution.

  19. Agricultural Clusters in the Netherlands

    NARCIS (Netherlands)

    Schouten, M.A.; Heijman, W.J.M.

    2012-01-01

    Michael Porter was the first to use the term cluster in an economic context. He introduced the term in The Competitive Advantage of Nations (1990). The term cluster is also known as business cluster, industry cluster, competitive cluster or Porterian cluster. This article aims at determining and

  20. Role of the Template in Model Biomineralization: Synchrotron X-ray Scattering Experiments

    Science.gov (United States)

    Uysal, Ahmet

    during model hydroxyapatite biomineralization. We studied the interactions between the organic template and the pre-nucleation clusters in the calcium phosphate solution depending on the temperature and the subphase concentration. Our results show how the organic-inorganic interface becomes more suitable for oriented hydroxyapatite crystallization under physiological conditions. One of the main reasons to study biomineralization is to use the knowledge obtained to develop new methods for nano-engineering. As a demonstration of this idea, we used Langmuir monolayer of alkylthiols to grow (111)-oriented gold nanoparticles from solution in a biomimetic way. The organic molecules we used make the gold nanoparticles grow with a specific orientation. However, they also change their organization to minimize the interaction potential at the organic-inorganic interface. In fact the final structure they adapt is very similar to self-assembled monolayers of alkylthiol molecules on gold crystal surfaces, so one can say that we "reversed" the self-assembly process. It has long been assumed, although not directly observed, that the organic template controls the growth of the inorganic crystals. Our studies, taken together, show that the interaction between the organic template and the crystals is not a one way street; rather, both organic and inorganic structures may change to lower the interaction potential energy at the interface. This is usually accomplished through a structural match between the surface lattices.

  1. Disentangling Porterian Clusters

    DEFF Research Database (Denmark)

    Jagtfelt, Tue

    This dissertation investigates the contemporary phenomenon of industrial clusters based on the work of Michael E. Porter, the central progenitor and promoter of the cluster notion. The dissertation pursues two central questions: 1) What is a cluster? and 2) How could Porter’s seemingly fuzzy...... to his membership on the Commission on Industrial Competitiveness, and that the cluster notion found in his influential book, Nations, represents a significant shift in his conception of cluster compared with his early conceptions. This shift, it is argued, is a deliberate attempt by Porter to create......, contested theory become so widely disseminated and applied as a normative and prescriptive strategy for economic development? The dissertation traces the introduction of the cluster notion into the EU’s Lisbon Strategy and demonstrates how its inclusion originates from Porter’s colleagues: Professor Örjan...

  2. From collisions to clusters

    DEFF Research Database (Denmark)

    Loukonen, Ville; Bork, Nicolai; Vehkamaki, Hanna

    2014-01-01

    The clustering of sulphuric acid with base molecules is one of the main pathways of new-particle formation in the Earth's atmosphere. First step in the clustering process is likely the formation of a (sulphuric acid)1(base)1(water)n cluster. Here, we present results from direct first......-principles molecular dynamics collision simulations of (sulphuric acid)1(water)0, 1 + (dimethylamine) → (sulphuric acid)1(dimethylamine)1(water)0, 1 cluster formation processes. The simulations indicate that the sticking factor in the collisions is unity: the interaction between the molecules is strong enough...... to overcome the possible initial non-optimal collision orientations. No post-collisional cluster break up is observed. The reasons for the efficient clustering are (i) the proton transfer reaction which takes place in each of the collision simulations and (ii) the subsequent competition over the proton...

  3. Clustering by Local Gravitation.

    Science.gov (United States)

    Wang, Zhiqiang; Yu, Zhiwen; Chen, C L Philip; You, Jane; Gu, Tianlong; Wong, Hau-San; Zhang, Jun

    2017-05-02

    The objective of cluster analysis is to partition a set of data points into several groups based on a suitable distance measure. We first propose a model called local gravitation among data points. In this model, each data point is viewed as an object with mass, and associated with a local resultant force (LRF) generated by its neighbors. The motivation of this paper is that there exist distinct differences between the LRFs (including magnitudes and directions) of the data points close to the cluster centers and at the boundary of the clusters. To capture these differences efficiently, two new local measures named centrality and coordination are further investigated. Based on empirical observations, two new clustering methods called local gravitation clustering and communication with local agents are designed, and several test cases are conducted to verify their effectiveness. The experiments on synthetic data sets and real-world data sets indicate that both clustering approaches achieve good performance on most of the data sets.

  4. Convex Discriminative Multitask Clustering.

    Science.gov (United States)

    Zhang, Xiao-Lei

    2015-01-01

    Multitask clustering tries to improve the clustering performance of multiple tasks simultaneously by taking their relationship into account. Most existing multitask clustering algorithms fall into the type of generative clustering, and none are formulated as convex optimization problems. In this paper, we propose two convex Discriminative Multitask Clustering (DMTC) objectives to address the problems. The first one aims to learn a shared feature representation, which can be seen as a technical combination of the convex multitask feature learning and the convex Multiclass Maximum Margin Clustering (M3C). The second one aims to learn the task relationship, which can be seen as a combination of the convex multitask relationship learning and M3C. The objectives of the two algorithms are solved in a uniform procedure by the efficient cutting-plane algorithm and further unified in the Bayesian framework. Experimental results on a toy problem and two benchmark data sets demonstrate the effectiveness of the proposed algorithms.

  5. Cluster Management Institutionalization

    DEFF Research Database (Denmark)

    Normann, Leo; Agger Nielsen, Jeppe

    2015-01-01

    This article explores a new management form – cluster management – in Danish public sector day care. Although cluster management has been widely adopted in Danish day care at the municipality level, it has attracted only sparse research attention. We use theoretical insights from Scandinavian...... institutionalism together with a longitudinal case-based inquiry into how cluster management has entered and penetrated the management practices of day care in Denmark. We demonstrate how cluster management became widely adopted in the day care field not only because of its intrinsic properties but also because...... of how it was legitimized as a “ready-to-use” management model. Further, our account reveals how cluster management translated into considerably different local variants as it travelled into specific organizations. However, these processes have not occurred sequentially with cluster management first...

  6. Active cluster crystals

    Science.gov (United States)

    Delfau, Jean-Baptiste; López, Cristóbal; Hernández-García, Emilio

    2017-09-01

    We study the appearance and properties of cluster crystals (solids in which the unit cell is occupied by a cluster of particles) in a two-dimensional system of self-propelled active Brownian particles with repulsive interactions. Self-propulsion deforms the clusters by depleting particle density inside, and for large speeds it melts the crystal. Continuous field descriptions at several levels of approximation allow us to identify the relevant physical mechanisms.

  7. Percolation in clustered networks

    OpenAIRE

    Miller, Joel C

    2009-01-01

    The social networks that infectious diseases spread along are typically clustered. Because of the close relation between percolation and epidemic spread, the behavior of percolation in such networks gives insight into infectious disease dynamics. A number of authors have studied clustered networks, but the networks often contain preferential mixing between high degree nodes. We introduce a class of random clustered networks and another class of random unclustered networks with the same prefer...

  8. Cluster Symmetries and Dynamics

    Directory of Open Access Journals (Sweden)

    Freer Martin

    2016-01-01

    Full Text Available Many light nuclei display behaviour that indicates that rather than behaving as an A-body systems, the protons and neutrons condense into clusters. The α-particle is the most obvious example of such clustering. This contribution examines the role of such α-clustering on the structure, symmetries and dynamics of the nuclei 8Be, 12C and 16O, recent experimental measurements and future perspectives.

  9. Data Mining with Clustering

    OpenAIRE

    Klímek, Petr

    2008-01-01

    One of the oppotunities in data mining is a use of clustering analysis. Clustering analysis belongs to unsupervised methods of data mining. We put here a focus on this method. Some basic principles are described in the second part of this paper. This method is examined on two examples from the marketing field. In the first example is used software Statgraphics 5.0Plus to solve clustering problem (nearest neighbour algorithm and Eucleidian distance); and in the second example is used Statistic...

  10. A complementary palette of NanoCluster Beacons.

    Science.gov (United States)

    Obliosca, Judy M; Babin, Mark C; Liu, Cong; Liu, Yen-Liang; Chen, Yu-An; Batson, Robert A; Ganguly, Mainak; Petty, Jeffrey T; Yeh, Hsin-Chih

    2014-10-28

    NanoCluster Beacons (NCBs), which use few-atom DNA-templated silver clusters as reporters, are a type of activatable molecular probes that are low-cost and easy to prepare. While NCBs provide a high fluorescence enhancement ratio upon activation, their activation colors are currently limited. Here we report a simple method to design NCBs with complementary emission colors, creating a set of multicolor probes for homogeneous, separation-free detection. By systematically altering the position and the number of cytosines in the cluster-nucleation sequence, we have tuned the activation colors of NCBs to green (C8-8, 460 nm/555 nm); yellow (C5-5, 525 nm/585 nm); red (C3-4, 580 nm/635 nm); and near-infrared (C3-3, 645 nm/695 nm). At the same NCB concentration, the activated yellow NCB (C5-5) was found to be 1.3 times brighter than the traditional red NCB (C3-4). Three of the four colors (green, yellow, and red) were relatively spectrally pure. We also found that subtle changes in the linker sequence (down to the single-nucleotide level) could significantly alter the emission spectrum pattern of an NCB. When the length of linker sequences was increased, the emission peaks were found to migrate in a periodic fashion, suggesting short-range interactions between silver clusters and nucleobases. Size exclusion chromatography results indicated that the activated NCBs are more compact than their native duplex forms. Our findings demonstrate the unique photophysical properties and environmental sensitivities of few-atom DNA-templated silver clusters, which are not seen before in common organic dyes or luminescent crystals.

  11. Turbulent clustering of initially well-mixed buoyant particles on a free-surface by Lagrangian coherent structures

    Science.gov (United States)

    Pratt, Kenneth R.; True, Aaron; Crimaldi, John P.

    2017-07-01

    Particles that float on the surface of a 3D incompressible turbulent flow are exposed to non-divergence-free properties that result in clustering and unmixing, a reversal of how turbulence normally acts to mix and dilute scalars. Particle clustering is dominated by Lagrangian processes that depend on the time history of the flow; this suggests that Lagrangian coherent structures (LCS) might serve as templates for cluster formation. In this study, non-divergence-free clustering is examined both experimentally and numerically to elucidate the role of LCS in the formation of particle clusters and voids. Experiments are performed on the free-surface of a water-filled tank with turbulence driven by the random pulsing of centrifugal pumps on the tank bottom. Clustering is quantified by imaging fluorescent, buoyant particles that are placed in an initially random distribution on the free-surface. Within clusters, concentrations are observed to increase by an order of magnitude, with the likelihood of observing enhanced concentrations increasing by two orders of magnitude. LCS, obtained from velocity fields utilizing particle image velocimetry, are shown to act as templates for cluster formation. In addition, LCS are shown to possess a dilatation component in non-divergence-free flows that is responsible for unmixing. Numerically, a non-divergence-free chaotic model consisting of interacting Taylor vortices is utilized to investigate processes responsible for cluster formation seen in the experiments. The model results support the experimental finding that LCS act as templates for particle clusters, with scalar unmixing driven by the dilatation component.

  12. Spatial Scan Statistic: Selecting clusters and generating elliptic clusters

    OpenAIRE

    Christiansen, Lasse Engbo; Andersen, Jens Strodl

    2004-01-01

    The spatial scan statistic is widely used to search for clusters. This paper shows that the usually applied elimination of overlapping clusters to find secondary clusters is sensitive to smooth changes in the shape of the clusters. We present an algorithm for generation of set of confocal elliptic clusters. In addition, we propose a new way to present the information in a given set of clusters based on the significance of the clusters.

  13. Spatial Scan Statistic: Selecting clusters and generating elliptic clusters

    DEFF Research Database (Denmark)

    Christiansen, Lasse Engbo; Andersen, Jens Strodl

    2004-01-01

    The spatial scan statistic is widely used to search for clusters. This paper shows that the usually applied elimination of overlapping clusters to find secondary clusters is sensitive to smooth changes in the shape of the clusters. We present an algorithm for generation of set of confocal elliptic...... clusters. In addition, we propose a new way to present the information in a given set of clusters based on the significance of the clusters....

  14. 15th Cluster workshop

    CERN Document Server

    Laakso, Harri; Escoubet, C. Philippe; The Cluster Active Archive : Studying the Earth’s Space Plasma Environment

    2010-01-01

    Since the year 2000 the ESA Cluster mission has been investigating the small-scale structures and processes of the Earth's plasma environment, such as those involved in the interaction between the solar wind and the magnetospheric plasma, in global magnetotail dynamics, in cross-tail currents, and in the formation and dynamics of the neutral line and of plasmoids. This book contains presentations made at the 15th Cluster workshop held in March 2008. It also presents several articles about the Cluster Active Archive and its datasets, a few overview papers on the Cluster mission, and articles reporting on scientific findings on the solar wind, the magnetosheath, the magnetopause and the magnetotail.

  15. Metal Cluster Topology. 1. Osmium Carbonyl Clusters.

    Science.gov (United States)

    1986-01-29

    AD-A164 372 NETAL CLUSTER TOPOLOGY I OSNIUM CARDONYI. CLUSTERS(U) i ’ GEORGIA IiNIY ATHENS DEPT OF CHENISTRY R 8 KING UCr S 29 JAN 86 TR-15 NSSSI4-S5...to distinguish between globally delocalized (D) and edge-localized (L) polyhedra. Treatment of globally delocalized polyhedra leads clearly to the same...of five internal orbitals for two of the six vertex atoms will make the pair of edge-fused tetrahedra unfavorable except for some of the heavy

  16. Exploring the nature and synchronicity of early cluster formation in the Large Magellanic Cloud - II. Relative ages and distances for six ancient globular clusters

    Science.gov (United States)

    Wagner-Kaiser, R.; Mackey, Dougal; Sarajedini, Ata; Chaboyer, Brian; Cohen, Roger E.; Yang, Soung-Chul; Cummings, Jeffrey D.; Geisler, Doug; Grocholski, Aaron J.

    2017-11-01

    We analyse Hubble Space Telescope observations of six globular clusters in the Large Magellanic Cloud (LMC) from programme GO-14164 in Cycle 23. These are the deepest available observations of the LMC globular cluster population; their uniformity facilitates a precise comparison with globular clusters in the Milky Way. Measuring the magnitude of the main-sequence turn-off point relative to template Galactic globular clusters allows the relative ages of the clusters to be determined with a mean precision of 8.4 per cent, and down to 6 per cent for individual objects. We find that the mean age of our LMC cluster ensemble is identical to the mean age of the oldest metal-poor clusters in the Milky Way halo to 0.2 ± 0.4 Gyr. This provides the most sensitive test to date of the synchronicity of the earliest epoch of globular cluster formation in two independent galaxies. Horizontal branch magnitudes and subdwarf fitting to the main sequence allow us to determine distance estimates for each cluster and examine their geometric distribution in the LMC. Using two different methods, we find an average distance to the LMC of 18.52 ± 0.05.

  17. Design and Fabrication of a Precision Template for Spine Surgery Using Selective Laser Melting (SLM).

    Science.gov (United States)

    Wang, Di; Wang, Yimeng; Wang, Jianhua; Song, Changhui; Yang, Yongqiang; Zhang, Zimian; Lin, Hui; Zhen, Yongqiang; Liao, Suixiang

    2016-07-22

    In order to meet the clinical requirements of spine surgery, this paper proposes the fabrication of the customized template for spine surgery through computer-aided design. A 3D metal printing-selective laser melting (SLM) technique was employed to directly fabricate the 316L stainless steel template, and the metal template with tiny locating holes was used as an auxiliary tool to insert spinal screws inside the patient's body. To guarantee accurate fabrication of the template for cervical vertebra operation, the contact face was placed upwards to improve the joint quality between the template and the cervical vertebra. The joint surface of the printed template had a roughness of Ra = 13 ± 2 μm. After abrasive blasting, the surface roughness was Ra = 7 ± 0.5 μm. The surgical metal template was bound with the 3D-printed Acrylonitrile Butadiene Styrene (ABS) plastic model. The micro-hardness values determined at the cross-sections of SLM-processed samples varied from HV0.3 250 to HV0.3 280, and the measured tensile strength was in the range of 450 MPa to 560 MPa, which showed that the template had requisite strength. Finally, the metal template was clinically used in the patient's surgical operation, and the screws were inserted precisely as the result of using the auxiliary template. The geometrical parameters of the template hole (e.g., diameter and wall thickness) were optimized, and measures were taken to optimize the key geometrical units (e.g., hole units) in metal 3D printing. Compared to the traditional technology of screw insertion, the use of the surgical metal template enabled the screws to be inserted more easily and accurately during spinal surgery. However, the design of the high-quality template should fully take into account the clinical demands of surgeons, as well as the advice of the designing engineers and operating technicians.

  18. Design and Fabrication of a Precision Template for Spine Surgery Using Selective Laser Melting (SLM

    Directory of Open Access Journals (Sweden)

    Di Wang

    2016-07-01

    Full Text Available In order to meet the clinical requirements of spine surgery, this paper proposes the fabrication of the customized template for spine surgery through computer-aided design. A 3D metal printing-selective laser melting (SLM technique was employed to directly fabricate the 316L stainless steel template, and the metal template with tiny locating holes was used as an auxiliary tool to insert spinal screws inside the patient’s body. To guarantee accurate fabrication of the template for cervical vertebra operation, the contact face was placed upwards to improve the joint quality between the template and the cervical vertebra. The joint surface of the printed template had a roughness of Ra = 13 ± 2 μm. After abrasive blasting, the surface roughness was Ra = 7 ± 0.5 μm. The surgical metal template was bound with the 3D-printed Acrylonitrile Butadiene Styrene (ABS plastic model. The micro-hardness values determined at the cross-sections of SLM-processed samples varied from HV0.3 250 to HV0.3 280, and the measured tensile strength was in the range of 450 MPa to 560 MPa, which showed that the template had requisite strength. Finally, the metal template was clinically used in the patient’s surgical operation, and the screws were inserted precisely as the result of using the auxiliary template. The geometrical parameters of the template hole (e.g., diameter and wall thickness were optimized, and measures were taken to optimize the key geometrical units (e.g., hole units in metal 3D printing. Compared to the traditional technology of screw insertion, the use of the surgical metal template enabled the screws to be inserted more easily and accurately during spinal surgery. However, the design of the high-quality template should fully take into account the clinical demands of surgeons, as well as the advice of the designing engineers and operating technicians.

  19. Two-dimensional collagen-graphene as colloidal templates for biocompatible inorganic nanomaterial synthesis.

    Science.gov (United States)

    Kumari, Divya; Sheikh, Lubna; Bhattacharya, Soumya; Webster, Thomas J; Nayar, Suprabha

    2017-01-01

    In this study, natural graphite was first converted to collagen-graphene composites and then used as templates for the synthesis of nanoparticles of silver, iron oxide, and hydroxyapatite. X-ray diffraction did not show any diffraction peaks of graphene in the composites after inorganic nucleation, compared to the naked composite which showed (002) and (004) peaks. Scanning electron micrographs showed lateral gluing/docking of these composites, possibly driven by an electrostatic attraction between the positive layers of one stack and negative layers of another, which became distorted after inorganic nucleation. Docking resulted in single layer-like characteristics in certain places, as seen under transmission electron microscopy, but sp 2 /sp 3 ratios from Raman analysis inferred three-layer composite formation. Strain-induced folding of these layers into uniform clusters at the point of critical nucleation, revealed beautiful microstructures under scanning electron microscopy. Lastly, cell viability studies using 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide assays showed the highest cell viability for the collagen-graphene-hydroxyapatite composites. In this manner, this study provided - to the field of nanomedicine - a new process for the synthesis of several nanoparticles (with low toxicity) of high interest for numerous medical applications.

  20. The CRISPR/Cas9 System Facilitates Clearance of the Intrahepatic HBV Templates In Vivo

    Directory of Open Access Journals (Sweden)

    Su-Ru Lin

    2014-01-01

    Full Text Available Persistence of hepatitis B virus (HBV covalently closed circular DNA (cccDNA under current antiviral therapy is a major barrier to eradication of chronic hepatitis B (CHB. Curing CHB will require novel strategies for specific disruption of cccDNA. The clustered regularly interspaced short palindromic repeats (CRISPR/Cas9 system is a newly developed tool for site-specific cleavage of DNA targets directed by a synthetic guide RNA (gRNA base-paired to the target DNA sequence. To examine whether this system can cleave HBV genomes, we designed eight gRNAs against HBV of genotype A. With the HBV-specific gRNAs, the CRISPR/Cas9 system significantly reduced the production of HBV core and surface proteins in Huh-7 cells transfected with an HBV-expression vector. Among eight screened gRNAs, two effective ones were identified. Interestingly, one gRNA targeting the conserved HBV sequence acted against different genotypes. Using a hydrodynamics-HBV persistence mouse model, we further demonstrated that this system could cleave the intrahepatic HBV genome-containing plasmid and facilitate its clearance in vivo, resulting in reduction of serum surface antigen levels. These data suggest that the CRISPR/Cas9 system could disrupt the HBV-expressing templates both in vitro and in vivo, indicating its potential in eradicating persistent HBV infection.

  1. Liquid as template for next generation micro devices

    Energy Technology Data Exchange (ETDEWEB)

    Charmet, Jerome; Haquette, Henri; Laux, Edith; Keppner, Herbert [HES-SO ARC, Institut des Microtechnologies Appliquees, La Chaux de Fonds (Switzerland); Gorodyska, Ganna; Textor, Marcus [ETHZ, BioInterfaceGroup, Zuerich (Switzerland); Durante, Guido Spinola; Portuondo-Campa, Erwin; Knapp, Helmut [CSEM Centre Suisse d' Electronique et de Microtechnique SA, Alpnach (Switzerland); Bitterli, Roland; Noell, Wilfried, E-mail: Jerome.Charmet@he-arc.c [Ecole Polytechnique Federale de Lausanne, Institute of Microengineering, Sensors, Actuators and Microsystems laboratory, Rue Jaquet Droz 1, 2000 Neuchatel (Switzerland)

    2009-08-01

    Liquids have fascinated generations of scientists and engineers. Since ancient Greece, the perfect natural shape of liquids has been used to create optical systems. Nowadays, the natural shape of liquid is used in the fabrication of microlens arrays that rely on the melting of glass or photoresist to generate high quality lenses. However shrinkage normally associated to the liquid to solid phase transition will affect the initial shape and quality of the liquid structure. In this contribution, a novel fabrication technique that enables the encapsulation and replication of liquid templates without affecting their natural shape is presented. The SOLID (SOlid on LIquid Deposition) process allows for a transparent solid film to be deposited and grown onto a liquid template (droplet, film, line) in a way that the liquid shapes the overgrowing solid layer. The resulting configuration of the SOLID devices is chemically and mechanically stable and is the base of a huge variety of new micro-nano systems in the field of microfluidics, biomedical devices and micro-optics among others. The SOLID process enables in a one step process the encapsulation of liquid microlenses, fluidics channels, drug reservoir or any naturally driven liquid structure. The phenomenon and solid-liquid interface resulting from the SOLID process is new and still unexploited. The solid layer used for the SOLID process chosen in this paper is poly-para-xylylene called Parylene, a transparent biocompatible polymer with excellent mechanical and chemical properties. Moreover, as the solid layer is growing over a liquid template, atomically smooth surfaces channels can be obtained. The polymerization of Parylene does not exert stress and does not change the shape of the liquid; this latter aspect is particularly interesting for manufacturing naturally driven liquid structures. In this paper the authors explore the limits of this new method by testing different designs of SOLID encapsulated structures and

  2. Surface smoothing and template partitioning for cranial implant CAD

    Science.gov (United States)

    Min, Kyoung-june; Dean, David

    2005-04-01

    Employing patient-specific prefabricated implants can be an effective treatment for large cranial defects (i.e., > 25 cm2). We have previously demonstrated the use of Computer Aided Design (CAD) software that starts with the patient"s 3D head CT-scan. A template is accurately matched to the pre-detected skull defect margin. For unilateral cranial defects the template is derived from a left-to-right mirrored skull image. However, two problems arise: (1) slice edge artifacts generated during isosurface polygonalization are inherited by the final implant; and (2) partitioning (i.e., cookie-cutting) the implant surface from the mirrored skull image usually results in curvature discontinuities across the interface between the patient"s defect and the implant. To solve these problems, we introduce a novel space curve-to-surface partitioning algorithm following a ray-casting surface re-sampling and smoothing procedure. Specifically, the ray-cast re-sampling is followed by bilinear interpolation and low-pass filtering. The resulting surface has a highly regular grid-like topological structure of quadrilaterally arranged triangles. Then, we replace the regions to be partitioned with predefined sets of triangular elements thereby cutting the template surface to accurately fit the defect margin at high resolution and without surface curvature discontinuities. Comparisons of the CAD implants for five patients against the manually generated implant that the patient actually received show an average implant-patient gap of 0.45mm for the former and 2.96mm for the latter. Also, average maximum normalized curvature of interfacing surfaces was found to be smoother, 0.043, for the former than the latter, 0.097. This indicates that the CAD implants would provide a significantly better fit.

  3. [Identification of corpses in mass disasters].

    Science.gov (United States)

    Stassi, M; Giaccone, P

    1976-04-28

    Reference is made to an air disaster causing considerable loss of life near Palermo. The type of lesions noted on the bodies is described and the criteria adopted for identification and recognition in accordance with the present legislation are explained. The reasons for mistaken identification, some of them of a most unusual nature, are listed and their prevention is discussed. An examination is also made of some recent proposals concerning the avoidance of such errors in disasters involging large numbers of persons.

  4. Radio Telescopes Reveal Youngest Stellar Corpse

    Science.gov (United States)

    2004-06-01

    Astronomers using a global combination of radio telescopes to study a stellar explosion some 30 million light-years from Earth have likely discovered either the youngest black hole or the youngest neutron star known in the Universe. Their discovery also marks the first time that a black hole or neutron star has been found associated with a supernova that has been seen to explode since the invention of the telescope nearly 400 years ago. M51 An artist's impression of Supernova 1986J. The newly discovered nebula around the black hole or neutron star in the center is shown in blue, and is in the center of the expanding, fragmented shell of material thrown off in the supernova explosion, which is shown in red. CREDIT: Norbert Bartel and Michael F. Bietenholz, York University; Artist: G. Arguner (Click on image for larger version) Image Files Artist's Conception (above image, 836K) Galaxy and Supernova (47K) A VLA image (left) of the galaxy NGC 891, showing the bright supernova explosion below the galaxy's center. At right, a closer view of the supernova, made with a global array of radio telescopes. CREDIT: Miguel A. Perez-Torres, Antxon Alberdi and Lucas Lara, Instituto de Astrofisica de Andalucia - CSIC, Spain, Jon Marcaide and Jose C. Guirado, Universidad de Valencia, Spain Franco Mantovani, IRA-CNR, Italy, Eduardo Ros, MPIfR, Germany, and Kurt W. Weiler, Naval Research Laboratory, USA Multi-Frequency Closeup View (201K) Blue and white area shows the nebula surrounding the black hole or neutron star lurking in the center of the supernova. This nebula is apparent at a higher radio frequency (15 GHz). The red and also the contours show the distorted, expanding shell of material thrown off in the supernova explosion. This shell is seen at a lower radio frequency (5 GHz). CREDIT: Michael F. Bietenholz and Norbert Bartel, York University, Michael Rupen, NRAO, NRAO/AUI/NSF A supernova is the explosion of a massive star after it exhausts its supply of nuclear fuel and collapses violently, rebounding in a cataclysmic blast that spews most of its material into interstellar space. What remains is either a neutron star, with its material compressed to the density of an atomic nucleus, or a black hole, with its matter compressed so tightly that its gravitational pull is so strong that not even light can escape it. A team of scientists studied a supernova called SN 1986J in a galaxy known as NGC 891. The supernova was discovered in 1986, but astronomers believe the explosion actually occurred about three years before. Using the National Science Foundation's Very Long Baseline Array (VLBA), Robert C. Byrd Green Bank Telescope (GBT), and Very Large Array (VLA), along with radio telescopes from the European VLBI Network, they made images that showed fine details of how the explosion evolves over time. "SN 1986J has shown a brightly-emitting object at its center that only became visible recently. This is the first time such a thing has been seen in any supernova," said Michael Bietenholz, of York University in Toronto, Ontario. Bietenholz worked with Norbert Bartel, also of York University, and Michael Rupen of the National Radio Astronomy Observatory (NRAO) in Socorro, New Mexico, on the project. The scientists reported their findings in the June 10 edition of Science Express. "A supernova is likely the most energetic single event in the Universe after the Big Bang. It is just fascinating to see how the smoke from the explosion is blown away and how now after all these years the fiery center is unveiled. It is a textbook story, now witnessed for the first time," Bartel said. Analysis of the bright central object shows that its characteristics are different from the outer shell of explosion debris in the supernova. "We can't yet tell if this bright object at the center is caused by material being sucked into a black hole or if it results from the action of a young pulsar, or neutron star," said Rupen. "It's very exciting because it's either the youngest black hole or the youngest neutron star anybody has ever seen," Rupen said. The youngest pulsar found to date is 822 years old. Finding the young object is only the beginning of the scientific excitement, the astronomers say. "We'll be watching it over the coming years. First, we hope to find out whether it's a black hole or a neutron star. Next, whichever it is, it's going to give us a whole new view of how these things start and develop over time," Rupen said. For example, Rupen explained, if the object is a young pulsar, learning the rate at which it is spinning and the strength of its magnetic field would be extremely important for understanding the physics of pulsars. The scientists point out that it will be important to observe SN 1986J at many wavelengths, not just radio, but also in visible light, infrared and others. In addition, the astronomers also now want to look for simiilar objects elsewhere in the Universe. The National Radio Astronomy Observatory is a facility of the National Science Foundation, operated under cooperative agreement by Associated Universities, Inc.

  5. Caring for corpses or killing patients?

    Science.gov (United States)

    Hall, J K

    1994-10-01

    Care of patients in a persistent vegetative state raises serious ethical questions. Often misdiagnosed, this "new disease," which is the result of advancing medical technology, raises such serious issues as the definition of death, nurses' personal ethical and religious convictions, and the ethical integrity of the nursing profession. Conscience clauses that allow nurses to refuse to cause death in non-dying patients vary widely, but few, if any, address the situation of incompetent but non-dying patients.

  6. Super Star Clusters

    Science.gov (United States)

    O'Connell, R. W.

    1994-05-01

    Super star clusters represent an extreme in the star formation process. They are very luminous, compact objects with L_V > 10(6) L_{V,sun} and diameters = 100 times higher than normal OB associations and clusters in ``giant H II regions''. Prior to HST about a dozen such objects had been identified in nearby galaxies, but at ground-based resolution they are nearly point sources. We review recent HST observations of individual super star clusters in NGC 1140, 1569, and 1705. They have half-light radii of only 2--3.5 pc, and some show evidence of substructure which should be resolvable with the repaired HST. After allowing for age differences, the surface brightness of NGC 1569-A is over 65 times higher than the core of 30 Doradus in the LMC and 1200 times higher than the mean rich LMC star cluster. In some cases, the energy released by the clusters into their surroundings is sufficient to drive galaxy-wide winds. Their properties make super star clusters good analogues of young globular clusters. In some, though not all, cases super star clusters appear to form in the aftermath of a merger or accretion event. The most impressive examples are the clusters detected by HST in NGC 1275 and 7252, one of which has the extraordinary luminosity ~ 6 times 10(8) L_{V,sun}. M82 affords a nearby view of a post-interaction system. HST imaging has identified over 80 super star clusters in its central regions with mean luminosities of ~ 3 times 10(6) L_{V,sun}. Their close packing and signs of interaction with the well-known supernova-driven wind suggest that they do not evolve independently. Super cluster evolution in starbursts is probably a collective phenomenon.

  7. Stampless fabrication of sheet bars using disposable templates

    Science.gov (United States)

    Smolentsev, V. P.; Safonov, S. V.; Smolentsev, E. V.; Fedonin, O. N.

    2016-04-01

    The article is devoted to the new method of small-scale fabrication of sheet bars. The procedure is performed by using disposable overlay templates, or those associated with a sheet, which parameters are obtained directly from the drawing. The proposed method used as a substitution of die cutting enables to intensify the preparatory technological process, which is particularly effective when launching the market-oriented items into production. It significantly increases the competitiveness of mechanical engineering and creates the conditions for technical support of present-day flexible production systems.

  8. DNA origami as a nanoscale template for protein assembly

    Energy Technology Data Exchange (ETDEWEB)

    Kuzyk, Anton; Laitinen, Kimmo T [Nanoscience Center, Department of Physics, University of Jyvaeskylae, PO Box 35, FIN-40014 (Finland); Toermae, Paeivi [Department of Applied Physics, Helsinki University of Technology, PO Box 5100, FIN-02015 (Finland)], E-mail: paivi.torma@hut.fi

    2009-06-10

    We describe two general approaches to the utilization of DNA origami structures for the assembly of materials. In one approach, DNA origami is used as a prefabricated template for subsequent assembly of materials. In the other, materials are assembled simultaneously with the DNA origami, i.e. the DNA origami technique is used to drive the assembly of materials. Fabrication of complex protein structures is demonstrated by these two approaches. The latter approach has the potential to be extended to the assembly of multiple materials with single attachment chemistry.

  9. Synthesis of Biocompatible Hydroxyapatite Using Chitosan Oligosaccharide as a Template

    Directory of Open Access Journals (Sweden)

    Jinyu Wang

    2015-11-01

    Full Text Available In this study, a novel biocompatible hydroxyapatite (HA was synthesized by using chitosan oligosaccharide (COS as a template. These HA samples were studied by Fourier transform infrared (FTIR spectroscopy, X-ray diffraction (XRD, X-ray photoelectron spectroscopy (XPS, and transmission electron microscopy (TEM. The biocompatibility of HA samples was evaluated via cell viability, cell morphology and alkaline phosphatase staining of MG-63 cell lines. The results show that HA synthesized in the presence of COS was favorable to proliferation and osteogenic differentiation of MG-63 cells. These hydroxyapatites are potentially attractive biomaterials for bone tissue engineering applications.

  10. Black silicon maskless templates for carbon nanotube forests

    DEFF Research Database (Denmark)

    Wierzbicki, Rafal; Schmidt, Michael Stenbæk; Boisen, Anja

    2013-01-01

    We present here a proof of concept for a novel fabrication method of vertically aligned carbon nanotube forests, utilizing black silicon nanograss (a forest of silicon nanometer-sized spikes created with reactive ion etching) coated with titanium tungsten diffusion barrier as a template. The method...... allows maskless definition of carbon nanotube forests with control of their density, nanotube diameter and height. Four nanograss reactive ion etching recipes are investigated and their wafer-to-wafer repeatability, wafer uniformity, and density control is discussed. Evaluation of carbon nanotube forests...

  11. Modelling Template for the Development of the Process Flowsheet

    DEFF Research Database (Denmark)

    Fedorova, Marina; Gani, Rafiqul

    2015-01-01

    provides building blocks for the templates (generic models previously developed); 3) computer aided methods and tools, that include procedures to perform model translation, model analysis, model verification/validation, model solution and model documentation. In this work, the integrated use of all three......Models are playing important roles in design and analysis of chemicals/bio-chemicals based products and the processes that manufacture them. Model-based methods and tools have the potential to decrease the number of experiments, which can be expensive and time consuming, and point to candidates...

  12. Statistical properties of convex clustering

    OpenAIRE

    Tan, Kean Ming; Witten, Daniela

    2015-01-01

    In this manuscript, we study the statistical properties of convex clustering. We establish that convex clustering is closely related to single linkage hierarchical clustering and $k$-means clustering. In addition, we derive the range of the tuning parameter for convex clustering that yields a non-trivial solution. We also provide an unbiased estimator of the degrees of freedom, and provide a finite sample bound for the prediction error for convex clustering. We compare convex clustering to so...

  13. Nonlocalized clustering and evolution of cluster structure in nuclei

    Science.gov (United States)

    Horiuchi, H.

    2017-06-01

    It is shown that the THSR (Tohsaki-Horiuchi-Schuck-Roepke) wave function describe well not only cluster-gas like structures but also ordinary cluster structures with spatial localization of clusters. Based on this fact, the container model has been proposed as a new model of cluster dynamics. For better description of cluster dynamics, extended version of container model has been introduced. The container model of cluster dynamics teaches us how is the evolution of cluster structure which starts from the ground state having shell-model structure to many kinds of cluster states up to the cluster-gas states.

  14. Templated green synthesis of plasmonic silver nanoparticles in onion epidermal cells suitable for surface-enhanced Raman and hyper-Raman scattering

    DEFF Research Database (Denmark)

    Palanco, Marta Espina; Mogensen, Klaus Bo; Guehlke, Marina

    2016-01-01

    We report fast and simple green synthesis of plasmonic silver nanoparticles in the epidermal cells of onions after incubation with AgNO3 solution. The biological environment supports the generation of silver nanostructures in two ways. The plant tissue delivers reducing chemicals for the initial...... formation of small silver clusters and their following conversion to plasmonic particles. Additionally, the natural morphological structures of the onion layers, in particular the extracellular matrix provides a biological template for the growth of plasmonic nanostructures. This is indicated by red glowing...... building blocks of plasmonic nanosensors to plants by the uptake of solutions of metal salts....

  15. Securing Personal Network Clusters

    NARCIS (Netherlands)

    Jehangir, A.; Heemstra de Groot, S.M.

    2007-01-01

    A Personal Network is a self-organizing, secure and private network of a user’s devices notwithstanding their geographic location. It aims to utilize pervasive computing to provide users with new and improved services. In this paper we propose a model for securing Personal Network clusters. Clusters

  16. Neurostimulation in cluster headache

    DEFF Research Database (Denmark)

    Pedersen, Jeppe L; Barloese, Mads; Jensen, Rigmor H

    2013-01-01

    PURPOSE OF REVIEW: Neurostimulation has emerged as a viable treatment for intractable chronic cluster headache. Several therapeutic strategies are being investigated including stimulation of the hypothalamus, occipital nerves and sphenopalatine ganglion. The aim of this review is to provide...... effective strategy must be preferred as first-line therapy for intractable chronic cluster headache....

  17. Cauchy cluster process

    DEFF Research Database (Denmark)

    Ghorbani, Mohammad

    2013-01-01

    In this paper we introduce an instance of the well-know Neyman–Scott cluster process model with clusters having a long tail behaviour. In our model the offspring points are distributed around the parent points according to a circular Cauchy distribution. Using a modified Cramér-von Misses test...

  18. Cluster Synchronization Algorithms

    NARCIS (Netherlands)

    Xia, Weiguo; Cao, Ming

    2010-01-01

    This paper presents two approaches to achieving cluster synchronization in dynamical multi-agent systems. In contrast to the widely studied synchronization behavior, where all the coupled agents converge to the same value asymptotically, in the cluster synchronization problem studied in this paper,

  19. Mixed-Initiative Clustering

    Science.gov (United States)

    Huang, Yifen

    2010-01-01

    Mixed-initiative clustering is a task where a user and a machine work collaboratively to analyze a large set of documents. We hypothesize that a user and a machine can both learn better clustering models through enriched communication and interactive learning from each other. The first contribution or this thesis is providing a framework of…

  20. Reflections on cluster policies

    NARCIS (Netherlands)

    Brakman, Steven; van Marrewijk, Charles

    Economic activity tends to cluster. This results in productivity gains. For policy makers this offers an opportunity to formulate and promote policies that foster clustering of economic activity. Paradoxically, although agglomeration rents are often found in empirical research, a rationale for

  1. Calixarene-supported clusters

    DEFF Research Database (Denmark)

    Taylor, Stephanie M.; McIntosh, Ruaraidh D.; Piligkos, Stergios

    2012-01-01

    A combination of complementary cluster ligands results in the formation of a new calixarene-supported ferromagnetic [Mn(5)] cage that displays the characteristic bonding modes of each support.......A combination of complementary cluster ligands results in the formation of a new calixarene-supported ferromagnetic [Mn(5)] cage that displays the characteristic bonding modes of each support....

  2. Detecting clusters of mutations.

    Directory of Open Access Journals (Sweden)

    Tong Zhou

    Full Text Available Positive selection for protein function can lead to multiple mutations within a small stretch of DNA, i.e., to a cluster of mutations. Recently, Wagner proposed a method to detect such mutation clusters. His method, however, did not take into account that residues with high solvent accessibility are inherently more variable than residues with low solvent accessibility. Here, we propose a new algorithm to detect clustered evolution. Our algorithm controls for different substitution probabilities at buried and exposed sites in the tertiary protein structure, and uses random permutations to calculate accurate P values for inferred clusters. We apply the algorithm to genomes of bacteria, fly, and mammals, and find several clusters of mutations in functionally important regions of proteins. Surprisingly, clustered evolution is a relatively rare phenomenon. Only between 2% and 10% of the genes we analyze contain a statistically significant mutation cluster. We also find that not controlling for solvent accessibility leads to an excess of clusters in terminal and solvent-exposed regions of proteins. Our algorithm provides a novel method to identify functionally relevant divergence between groups of species. Moreover, it could also be useful to detect artifacts in automatically assembled genomes.

  3. The construction of MRI brain/head templates for Chinese children from 7 to 16 years of age

    Directory of Open Access Journals (Sweden)

    Wanze Xie

    2015-10-01

    Full Text Available Population-specific brain templates that provide detailed brain information are beneficial to both structural and functional neuroimaging research. However, age-specific MRI templates have not been constructed for Chinese or any Asian developmental populations. This study developed novel T1-weighted average brain and head templates for Chinese children from 7 to 16 years of age in two-year increments using high quality magnetic resonance imaging (MRI and well-validated image analysis techniques. A total of 138 Chinese children (51 F/87 M were included in this study. The internally and externally validated registrations show that these Chinese age-specific templates fit Chinese children's MR images significantly better than age-specific templates created from U.S. children, or adult templates based on either Chinese or North American adults. It implies that age-inappropriate (e.g., the Chinese56 template, the US20–24 template and nationality-inappropriate brain templates (e.g., U.S. children's templates, the US20–24 template do not provide optimal reference MRIs for processing MR brain images of Chinese pediatric populations. Thus, our age-specific MRI templates are the first of the kind and should be useful in neuroimaging studies with children from Chinese or other Asian populations. These templates can also serve as the foundations for the construction of more comprehensive sets of nationality-specific templates for Asian developmental populations. These templates are available for use in our database.

  4. Template security analysis of multimodal biometric frameworks based on fingerprint and hand geometry

    Directory of Open Access Journals (Sweden)

    Arvind Selwal

    2016-09-01

    Full Text Available Biometric systems are automatic tools used to provide authentication during various applications of modern computing. In this work, three different design frameworks for multimodal biometric systems based on fingerprint and hand geometry modalities are proposed. An analysis is also presented to diagnose various types of template security issues in the proposed system. Fuzzy analytic hierarchy process (FAHP is applied with five decision parameters on all the designs and framework 1 is found to be better in terms of template data security, templates fusion and computational efficiency. It is noticed that template data security before storage in database is a challenging task. An important observation is that a template may be secured at feature fusion level and an indexing technique may be used to improve the size of secured templates.

  5. Efficiency, comprehensiveness and cost-effectiveness when comparing dictation and electronic templates for operative reports.

    Science.gov (United States)

    Laflamme, Mark R; Dexter, Paul R; Graham, Marilyn F; Hui, Siu L; McDonald, Clement J

    2005-01-01

    Surgeons typically document operative events using dictation services. Dictated reports are frequently incomplete or delayed. Electronic note templates could potentially improve this process. Using a study design of alternating four week blocks, we compared the timeliness and comprehensiveness of operative notes created through the use of electronic templates versus dictation services for five surgical procedures. Templates resulted in dramatically faster times to the presence of a verified operative report in the medical record compared to dictation services (mean 28 v. 22,440 minutes). Templates increased overall compliance with national standards for operative note documentation and avoided transcription costs. Documentation with templates took slightly more time than dictation (mean 6.77 v. 5.96 minutes; P=0.036), not including the additional time necessary to subsequently verify dictated reports. We conclude that electronic note templates can improve the timeliness and comprehensiveness of operative documentation, while decreasing transcription costs and requiring minimal additional effort on the part of surgeons.

  6. Negotiating Cluster Boundaries

    DEFF Research Database (Denmark)

    Giacomin, Valeria

    2017-01-01

    Palm oil was introduced to Malay(si)a as an alternative to natural rubber, inheriting its cluster organizational structure. In the late 1960s, Malaysia became the world’s largest palm oil exporter. Based on archival material from British colonial institutions and agency houses, this paper focuses...... on the governance dynamics that drove institutional change within this cluster during decolonization. The analysis presents three main findings: (i) cluster boundaries are defined by continuous tug-of-war style negotiations between public and private actors; (ii) this interaction produces institutional change...... within the cluster, in the form of cumulative ‘institutional rounds’ – the correction or disruption of existing institutions or the creation of new ones; and (iii) this process leads to a broader inclusion of local actors in the original cluster configuration. The paper challenges the prevalent argument...

  7. Mathematical classification and clustering

    CERN Document Server

    Mirkin, Boris

    1996-01-01

    I am very happy to have this opportunity to present the work of Boris Mirkin, a distinguished Russian scholar in the areas of data analysis and decision making methodologies. The monograph is devoted entirely to clustering, a discipline dispersed through many theoretical and application areas, from mathematical statistics and combina­ torial optimization to biology, sociology and organizational structures. It compiles an immense amount of research done to date, including many original Russian de­ velopments never presented to the international community before (for instance, cluster-by-cluster versions of the K-Means method in Chapter 4 or uniform par­ titioning in Chapter 5). The author's approach, approximation clustering, allows him both to systematize a great part of the discipline and to develop many in­ novative methods in the framework of optimization problems. The optimization methods considered are proved to be meaningful in the contexts of data analysis and clustering. The material presented in ...

  8. Cool Cluster Correctly Correlated

    Energy Technology Data Exchange (ETDEWEB)

    Varganov, Sergey Aleksandrovich [Iowa State Univ., Ames, IA (United States)

    2005-01-01

    Atomic clusters are unique objects, which occupy an intermediate position between atoms and condensed matter systems. For a long time it was thought that physical and chemical properties of atomic dusters monotonically change with increasing size of the cluster from a single atom to a condensed matter system. However, recently it has become clear that many properties of atomic clusters can change drastically with the size of the clusters. Because physical and chemical properties of clusters can be adjusted simply by changing the cluster's size, different applications of atomic clusters were proposed. One example is the catalytic activity of clusters of specific sizes in different chemical reactions. Another example is a potential application of atomic clusters in microelectronics, where their band gaps can be adjusted by simply changing cluster sizes. In recent years significant advances in experimental techniques allow one to synthesize and study atomic clusters of specified sizes. However, the interpretation of the results is often difficult. The theoretical methods are frequently used to help in interpretation of complex experimental data. Most of the theoretical approaches have been based on empirical or semiempirical methods. These methods allow one to study large and small dusters using the same approximations. However, since empirical and semiempirical methods rely on simple models with many parameters, it is often difficult to estimate the quantitative and even qualitative accuracy of the results. On the other hand, because of significant advances in quantum chemical methods and computer capabilities, it is now possible to do high quality ab-initio calculations not only on systems of few atoms but on clusters of practical interest as well. In addition to accurate results for specific clusters, such methods can be used for benchmarking of different empirical and semiempirical approaches. The atomic clusters studied in this work contain from a few atoms

  9. Galaxy cluster's rotation

    Science.gov (United States)

    Manolopoulou, M.; Plionis, M.

    2017-03-01

    We study the possible rotation of cluster galaxies, developing, testing, and applying a novel algorithm which identifies rotation, if such does exist, as well as its rotational centre, its axis orientation, rotational velocity amplitude, and, finally, the clockwise or counterclockwise direction of rotation on the plane of the sky. To validate our algorithms we construct realistic Monte Carlo mock rotating clusters and confirm that our method provides robust indications of rotation. We then apply our methodology on a sample of Abell clusters with z ≲ 0.1 with member galaxies selected from the Sloan Digital Sky Survey DR10 spectroscopic data base. After excluding a number of substructured clusters, which could provide erroneous indications of rotation, and taking into account the expected fraction of misidentified coherent substructure velocities for rotation, provided by our Monte Carlo simulation analysis, we find that ∼23 per cent of our clusters are rotating under a set of strict criteria. Loosening the strictness of the criteria, on the expense of introducing spurious rotation indications, we find this fraction increasing to ∼28 per cent. We correlate our rotation indicators with the cluster dynamical state, provided either by their Bautz-Morgan type or by their X-ray isophotal shape and find for those clusters showing rotation within 1.5 h^{-1}_{70} Mpc that the significance of their rotation is related to the dynamically younger phases of cluster formation but after the initial anisotropic accretion and merging has been completed. Finally, finding rotational modes in galaxy clusters could lead to the necessity of correcting the dynamical cluster mass calculations.

  10. Syed-Neblett interstitial template in locally advanced gynecological malignancies

    Energy Technology Data Exchange (ETDEWEB)

    Ampuero, F.; Doss, L.L.; Khan, M.; Skipper, B.; Hilgers, R.D.

    1983-12-01

    Twenty-eight patients with locally advanced malignancies of the cervix and vagina were treated with a combination of external radiation therapy and after loading Syed-Neblett iridium template. There were 22 patients with squamous cell cancer and two patients with adenocarcinomas of the cervix. Four patients with squamous cell cancer of the vagina were treated with this method. Only patients with locally advanced disease (cervical lesion >4 cm in diameter) and poor vagnal anatomy were selected for this modality of therapy. In this series the incidence of distant failures of 39% seems to confirm the significance of local volume of disease as a prognostic indicator; despite a local control rate of 59%, only 33% of the patients are alive from 25-51 months. Complications occurred in 12 patients (42%). Six patients (22%) developed severe rectal stricture or rectovaginal fistula necessitating diverting sigmoid colostomy; five patients (18%) developed hemorrhagic proctitis with diarrhea and tenesmus; one patient developed vaginal vault necrosis. Complications occurred 7 to 24 months following therapy. Six of the 12 patients developing complications are dead of disease. On the basis of this study and because of the low cure rate and high incidence of complications, the value of the Syed-Neblett template in locally advanced gynecologic malignancies should be reconsidered.

  11. Fire Protection Engineering Design Brief Template. Hydrogen Refueling Station.

    Energy Technology Data Exchange (ETDEWEB)

    LaFleur, Angela Christine [Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States); Muna, Alice Baca [Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States); Groth, Katrina M. [Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States)

    2015-08-01

    Building a hydrogen infrastructure system is critical to supporting the development of alternate- fuel vehicles. This report provides a methodology for implementing a performance-based design of an outdoor hydrogen refueling station that does not meet specific prescriptive requirements in NFPA 2, The Hydrogen Technologies Code . Performance-based designs are a code-compliant alternative to meeting prescriptive requirements. Compliance is demonstrated by comparing a prescriptive-based fueling station design with a performance-based design approach using Quantitative Risk Assessment (QRA) methods and hydrogen risk assessment tools. This template utilizes the Sandia-developed QRA tool, Hydrogen Risk Analysis Models (HyRAM), which combines reduced-order deterministic models that characterize hydrogen release and flame behavior with probabilistic risk models to quantify risk values. Each project is unique and this template is not intended to account for site-specific characteristics. Instead, example content and a methodology are provided for a representative hydrogen refueling site which can be built upon for new hydrogen applications.

  12. DNA template dependent accuracy variation of nucleotide selection in transcription.

    Directory of Open Access Journals (Sweden)

    Harriet Mellenius

    Full Text Available It has been commonly assumed that the effect of erroneous transcription of DNA genes into messenger RNAs on peptide sequence errors are masked by much more frequent errors of mRNA translation to protein. We present a theoretical model of transcriptional accuracy. It uses experimentally estimated standard free energies of double-stranded DNA and RNA/DNA hybrids and predicts a DNA template dependent transcriptional accuracy variation spanning several orders of magnitude. The model also identifies high-error as well a high-accuracy transcription motifs. The source of the large accuracy span is the context dependent variation of the stacking free energy of pairs of correct and incorrect base pairs in the ever moving transcription bubble. Our model predictions have direct experimental support from recent single molecule based identifications of transcriptional errors in the C. elegans transcriptome. Our conclusions challenge the general view that amino acid substitution errors in proteins are mainly caused by translational errors. It suggests instead that transcriptional error hotspots are the dominating source of peptide sequence errors in some DNA template contexts, while mRNA translation is the major cause of protein errors in other contexts.

  13. Hydrothermal synthesis of free-template zeolite T from kaolin

    Science.gov (United States)

    Arshad, Sazmal E.; Yusslee, Eddy F.; Rahman, Md. Lutfor; Sarkar, Shaheen M.; Patuwan, Siti Z.

    2017-12-01

    Free-template zeolite T crystals were synthesized via hydrothermal synthesis by utilizing the activated kaolin as silica and alumina source, with the molar composition of 1 SiO2: 0.04 Al2O3: 0.26 Na2O: 0.09 K2O: 14 H2O. Observation of the formation of free-template zeolite crystals were done at temperature 90°C, 100 °C and 110 °C respectively. It was therefore determined that during the 120 h of the synthesis at 90 °C, zeolite T nucleated and formed a first competitive phase with zeolite L. As temperature increases to 100 °C, zeolite T presented itself as a major phase in the system at time 168 h. Subsequently, development of Zeolite T with second competitive phase of zeolite W was observed at temperature 110 °C. In this study, XRD and SEM instruments were used to monitor the behavior of zeolite T crystals with respect of temperature and time. By using natural resource of kaolin clay as a starting material, this paper hence aims to provide new findings in synthesis of zeolite T using low energy consumption and low production cost.

  14. Microscopic and magnetic properties of template assisted electrodeposited iron nanowires

    Energy Technology Data Exchange (ETDEWEB)

    Irshad, M. I., E-mail: imrancssp@gmail.com; Mohamed, N. M., E-mail: noranimuti-mohamed@petronas.com.my; Yar, A., E-mail: asfandyarhargan@gmail.com [Department of Fundamental & Applied Sciences, Universiti Teknologi PETRONAS, 31750 PERAK (Malaysia); Ahmad, F., E-mail: faizahmad@petronas.com.my; Abdullah, M. Z., E-mail: zaki-abdullah@petronas.com.my [Department of Mechanical Engineering, Universiti Teknologi PETRONAS, 31750 PERAK (Malaysia)

    2015-07-22

    Nanowires of magnetic materials such as Iron, nickel, cobalt, and alloys of them are one of the most widely investigated structures because of their possible applications in high density magnetic recording media, sensor elements, and building blocks in biological transport systems. In this work, Iron nanowires have been prepared by electrodeposition technique using Anodized Aluminium Oxide (AAO) templates. The electrolyte used consisted of FeSO{sub 4.}6H{sub 2}O buffered with H{sub 3}BO{sub 3} and acidized by dilute H{sub 2}SO{sub 4}. FESEM analysis shows that the asdeposited nanowires are parallel to one another and have high aspect ratio with a reasonably high pore-filing factor. To fabricate the working electrode, a thin film of copper (∼ 220 nm thick) was coated on back side of AAO template by e-beam evaporation system to create electrical contact with the external circuit. The TEM results show that electrodeposited nanowires have diameter around 100 nm and are polycrystalline in structure. Magnetic properties show the existence of anisotropy for in and out of plane configuration. These nanowires have potential applications in magnetic data storage, catalysis and magnetic sensor applications.

  15. Functional Nanomaterials based on Nanoporous Block Copolymer Templates

    Science.gov (United States)

    Kim, Jin Kon

    2011-03-01

    Nanoporous templates have been widely used for the development of new functional nanostructured materials suitable for electronics, optics, magnetism, and energy storage materials. We have prepared nanoporous templates by using thin films of mixtures of polystyrene-block-poly(methyl methacrylate) (PS- b -PMMA) and PMMA homopolymers. These nanoporous films were found to be very effective for the separation of human Rhinovirus type 14, major pathogen of a common cold in humans. We found that when the pore size was effectively controlled down to 6 nm, a long-term constant in vitro release of BSA and hGH was achieved without their denaturation up to 2 months. The long-term constant delivery based on this membrane for protein drugs within the therapeutic range can be highly appreciated for the patients with hormone-deficiency. Work done in collaboration with Seung Yun Yang, Pohang University of Science and Technology. This work was supported by the National Creative Research Initiative Program supported by NRF.

  16. Template-based education toolkit for mobile platforms

    Science.gov (United States)

    Golagani, Santosh Chandana; Esfahanian, Moosa; Akopian, David

    2012-02-01

    Nowadays mobile phones are the most widely used portable devices which evolve very fast adding new features and improving user experiences. The latest generation of hand-held devices called smartphones is equipped with superior memory, cameras and rich multimedia features, empowering people to use their mobile phones not only as a communication tool but also for entertainment purposes. With many young students showing interest in learning mobile application development one should introduce novel learning methods which may adapt to fast technology changes and introduce students to application development. Mobile phones become a common device, and engineering community incorporates phones in various solutions. Overcoming the limitations of conventional undergraduate electrical engineering (EE) education this paper explores the concept of template-based based education in mobile phone programming. The concept is based on developing small exercise templates which students can manipulate and revise for quick hands-on introduction to the application development and integration. Android platform is used as a popular open source environment for application development. The exercises relate to image processing topics typically studied by many students. The goal is to enable conventional course enhancements by incorporating in them short hands-on learning modules.

  17. Memoir: template-based structure prediction for membrane proteins.

    Science.gov (United States)

    Ebejer, Jean-Paul; Hill, Jamie R; Kelm, Sebastian; Shi, Jiye; Deane, Charlotte M

    2013-07-01

    Membrane proteins are estimated to be the targets of 50% of drugs that are currently in development, yet we have few membrane protein crystal structures. As a result, for a membrane protein of interest, the much-needed structural information usually comes from a homology model. Current homology modelling software is optimized for globular proteins, and ignores the constraints that the membrane is known to place on protein structure. Our Memoir server produces homology models using alignment and coordinate generation software that has been designed specifically for transmembrane proteins. Memoir is easy to use, with the only inputs being a structural template and the sequence that is to be modelled. We provide a video tutorial and a guide to assessing model quality. Supporting data aid manual refinement of the models. These data include a set of alternative conformations for each modelled loop, and a multiple sequence alignment that incorporates the query and template. Memoir works with both α-helical and β-barrel types of membrane proteins and is freely available at http://opig.stats.ox.ac.uk/webapps/memoir.

  18. Biosynthesis of amorphous mesoporous aluminophosphates using yeast cells as templates

    Energy Technology Data Exchange (ETDEWEB)

    Sifontes, Ángela B., E-mail: asifonte@ivic.gob.ve [Centro de Química, Instituto Venezolano de Investigaciones Científicas, Apartado 20632, Caracas 1020-A (Venezuela, Bolivarian Republic of); González, Gema [Centro de Ingeniería de Materiales y Nanotecnología, Instituto Venezolano de Investigaciones Científicas, Apartado 20632, Caracas 1020-A (Venezuela, Bolivarian Republic of); Tovar, Leidy M.; Méndez, Franklin J. [Centro de Química, Instituto Venezolano de Investigaciones Científicas, Apartado 20632, Caracas 1020-A (Venezuela, Bolivarian Republic of); Gomes, Maria E. [Centro de Ingeniería de Materiales y Nanotecnología, Instituto Venezolano de Investigaciones Científicas, Apartado 20632, Caracas 1020-A (Venezuela, Bolivarian Republic of); Cañizales, Edgar [Área de Análisis Químico Inorgánico, PDVSA, INTEVEP, Los Teques 1070-A (Venezuela, Bolivarian Republic of); Niño-Vega, Gustavo; Villalobos, Hector [Centro de Microbiología y Biología Celular, Instituto Venezolano de Investigaciones Científicas, Apartado 20632, Caracas 1020-A (Venezuela, Bolivarian Republic of); Brito, Joaquin L. [Centro de Química, Instituto Venezolano de Investigaciones Científicas, Apartado 20632, Caracas 1020-A (Venezuela, Bolivarian Republic of)

    2013-02-15

    Graphical abstract: Display Omitted Highlights: ► Amorphous aluminophosphates can take place using yeast as template. ► A mesoporous material was obtained. ► The specific surface area after calcinations ranged between 176 and 214 m{sup 2} g{sup −1}. -- Abstract: In this study aluminophosphates have been synthesized from aluminum isopropoxide and phosphoric acid solutions using yeast cells as template. The physicochemical characterization was carried out by thermogravimetric analysis; X-ray diffraction; Fourier transform infrared; N{sub 2} adsorption–desorption isotherms; scanning electron microscopy; transmission electron microscopy and potentiometric titration with N-butylamine for determination of: thermal stability; crystalline structure; textural properties; morphology and surface acidity, respectively. The calcined powders consisted of an intimate mixture of amorphous and crystallized AlPO particles with sizes between 23 and 30 nm. The average pore size observed is 13–16 nm and the specific surface area after calcinations (at 650 °C) ranged between 176 and 214 m{sup 2} g{sup −1}.

  19. Templated synthesis of DNA nanotubes with controlled, predetermined lengths.

    Science.gov (United States)

    Lo, Pik Kwan; Altvater, Florian; Sleiman, Hanadi F

    2010-08-04

    We report a DNA-templated approach to construct nanotubes with controlled lengths and narrow molecular weight distribution, allowing the deliberate variation of this length. This approach relies on the facile and modular assembly of a DNA guide strand of precise length that contains single-stranded gaps repeating at every 50 nm. This is followed by positioning triangular DNA "rungs" on each of these single-stranded gaps and adding identical linking strands to the two other sides of the triangles to close the DNA nanotubes. The length of the guide strand can be deliberately changed. We show the use of this approach to produce nanotubes with lengths of 1 microm or 500 nm and narrow length distributions. This is in contrast to nontemplated approaches, which lead to long and polydisperse nanotubes. We also demonstrate the encapsulation of 20 nm gold nanoparticles within these well-defined nanotubes to form finite lines of gold nanoparticles with longitudinal plasmon coupling, with a number of potential nanophotonic applications. This guiding strand approach is a useful tool in the creation of DNA nanostructures, in this case allowing the use of a simple template generated by a minimal number of DNA strands to program the length and molecular weight distribution of assemblies, as well as to organize any number of DNA-labeled nano-objects into finite structures.

  20. Templated sequence insertion polymorphisms in the human genome

    Science.gov (United States)

    Onozawa, Masahiro; Aplan, Peter

    2016-11-01

    Templated Sequence Insertion Polymorphism (TSIP) is a recently described form of polymorphism recognized in the human genome, in which a sequence that is templated from a distant genomic region is inserted into the genome, seemingly at random. TSIPs can be grouped into two classes based on nucleotide sequence features at the insertion junctions; Class 1 TSIPs show features of insertions that are mediated via the LINE-1 ORF2 protein, including 1) target-site duplication (TSD), 2) polyadenylation 10-30 nucleotides downstream of a “cryptic” polyadenylation signal, and 3) preference for insertion at a 5’-TTTT/A-3’ sequence. In contrast, class 2 TSIPs show features consistent with repair of a DNA double-strand break via insertion of a DNA “patch” that is derived from a distant genomic region. Survey of a large number of normal human volunteers demonstrates that most individuals have 25-30 TSIPs, and that these TSIPs track with specific geographic regions. Similar to other forms of human polymorphism, we suspect that these TSIPs may be important for the generation of human diversity and genetic diseases.

  1. Templated Control of Au nanospheres in Silica Nanowires

    Energy Technology Data Exchange (ETDEWEB)

    Tringe, J W; Vanamu, G; Zaidi, S H

    2007-03-15

    The formation of regularly-spaced metal nanostructures in selectively-placed insulating nanowires is an important step toward realization of a wide range of nano-scale electronic and opto-electronic devices. Here we report templated synthesis of Au nanospheres embedded in silica nanowires, with nanospheres consistently spaced with a period equal to three times their diameter. Under appropriate conditions, nanowires form exclusively on Si nanostructures because of enhanced local oxidation and reduced melting temperatures relative to templates with larger dimensions. We explain the spacing of the nanospheres with a general model based on a vapor-liquid-solid mechanism, in which an Au/Si alloy dendrite remains liquid in the nanotube until a critical Si concentration is achieved locally by silicon oxide-generated nanowire growth. Additional Si oxidation then locally reduces the surface energy of the Au-rich alloy by creating a new surface with minimum area inside of the nanotube. The isolated liquid domain subsequently evolves to become an Au nanosphere, and the process is repeated.

  2. Nitrite-Templated Synthesis of Lanthanide-Containing [2]Rotaxanes for Anion Sensing**

    Science.gov (United States)

    Langton, Matthew J; Blackburn, Octavia A; Lang, Thomas; Faulkner, Stephen; Beer, Paul D

    2014-01-01

    The first anion-templated synthesis of a lanthanide-containing interlocked molecule is demonstrated by utilizing a nitrite anion to template initial pseudorotaxane formation. Subsequent stoppering of the interpenetrated assembly allows for the preparation of a lanthanide-functionalized [2]rotaxane in high yield. Following removal of the nitrite anion template, the europium [2]rotaxane host is demonstrated to recognize and sense fluoride selectively. PMID:24989322

  3. Computational Resources to Filter Gravitational Wave Data with P-approximant Templates

    OpenAIRE

    Porter, Edward K.

    2002-01-01

    The prior knowledge of the gravitational waveform from compact binary systems makes matched filtering an attractive detection strategy. This detection method involves the filtering of the detector output with a set of theoretical waveforms or templates. One of the most important factors in this strategy is knowing how many templates are needed in order to reduce the loss of possible signals. In this study we calculate the number of templates and computational power needed for a one-step searc...

  4. Rancang Bangun E-commerce Template Untuk Aplikasi Content and Management Electronic Mall (Came-mall)

    OpenAIRE

    Maulana, Kamal; Sugiharto, Aris; Wibawa, Helmie Arif

    2012-01-01

    Kebanyakan e-commerce di Indonesia masih berorientasi ke pasar regional. Sehingga e-commerce tersebut masih menggunakan bahasa Indonesia. Adanya e-commerce template memudahkan pembuatan sebuah e-commerce. Namun, kebanyakan e-commerce template menggunakan bahasa Inggris sebagai default. Dibutuhkan aplikasi pembuat e-commerce yang menggunakan bahasa Indonesia dan memiliki fungsi-fungsi yang hanya dibutuhkan oleh pengguna pemula. Came-mall adalah salah satu aplikasi e-commerce template yang meng...

  5. Operating and Maintaining Energy Smart Schools Action Plan Template - All Action Plans

    Energy Technology Data Exchange (ETDEWEB)

    none,

    2009-07-01

    EnergySmart Schools action plan templates for benchmarking, lighting, HVAC, water heating, building envelope, transformer, plug loads, kitchen equipment, swimming pool, building automation system, other.

  6. Directed self-assembly (DSA) grapho-epitaxy template generation with immersion lithography

    Science.gov (United States)

    Ma, Yuansheng; Lei, Junjiang; Torres, J. A.; Hong, Le; Word, James; Fenger, Germain; Tritchkov, Alexander; Lippincott, George; Gupta, Rachit; Lafferty, Neal; He, Yuan; Bekaert, Joost; Vanderberghe, Geert

    2015-03-01

    In this paper, we present an optimization methodology for the template designs of sub-resolution contacts using directed self-assembly (DSA) with grapho-epitaxy and immersion lithography. We demonstrate the flow using a 60nm-pitch contact design in doublet with Monte Carlo simulations for DSA. We introduce the notion of Template Error Enhancement Factor (TEEF) to gauge the sensitivity of DSA printing infidelity to template printing infidelity, and evaluate optimized template designs with TEEF metrics. Our data shows that SMO is critical to achieve sub-80nm non- L0 pitches for DSA patterns using 193i.

  7. Aluminum Templates of Different Sizes with Micro-, Nano- and Micro/Nano-Structures for Cell Culture

    Directory of Open Access Journals (Sweden)

    Ming-Liang Yen

    2017-10-01

    Full Text Available This study investigates the results of cell cultures on aluminum (Al templates with flat-structures, micro-structures, nano-structures and micro/nano-structures. An Al template with flat-structure was obtained by electrolytic polishing; an Al template with micro-structure was obtained by micro-powder blasting; an Al template with nano-structure was obtained by aluminum anodization; and an Al template with micro/nano-structure was obtained by micro-powder blasting and then anodization. Osteoblast-like cells were cultured on aluminum templates with various structures. The microculture tetrazolium test assay was utilized to assess the adhesion, elongation, and proliferation behaviors of cultured osteoblast-like cells on aluminum templates with flat-structures, micro-structures, nano-structures, and micro/nano-structures. The results showed that the surface characterization of micro/nano-structure of aluminum templates had superhydrophilic property, and these also revealed that an aluminum template with micro/nano-structure could provide the most suitable growth situation for cell culture.

  8. Influence of solvent polarity and supersaturation on template-induced nucleation of carbamazepine crystal polymorphs

    Science.gov (United States)

    Parambil, Jose V.; Poornachary, Sendhil K.; Tan, Reginald B. H.; Heng, Jerry Y. Y.

    2017-07-01

    Studies on the use of template surfaces to induce heterogeneous crystal nucleation have gained momentum in recent years-with potential applications in selective crystallisation of polymorphs and in the generation of seed crystals in a continuous crystallisation process. In developing a template-assisted solution crystallisation process, the kinetics of homogeneous versus heterogeneous crystal nucleation could be influenced by solute-solvent, solute-template, and solvent-template interactions. In this study, we report the effect of solvents of varying polarity on the nucleation of carbamazepine (CBZ) crystal polymorphs, a model active pharmaceutical ingredient. The experimental results demonstrate that functionalised template surfaces are effective in promoting crystallisation of either the metastable (form II) or stable (form III) polymorphs of CBZ only in moderately (methanol, ethanol, isopropanol) and low polar (toluene) solvents. A solvent with high polarity (acetonitrile) is thought to mask the template effect on heterogeneous nucleation due to strong solute-solvent and solvent-template interactions. The current study highlights that a quality-by-design (QbD) approach-considering the synergistic effects of solute concentration, solvent type, solution temperature, and template surface chemistry on crystal nucleation-is critical to the development of a template-induced crystallisation process.

  9. RNA/DNA hybrid binding affinity determines telomerase template-translocation efficiency

    Science.gov (United States)

    Qi, Xiaodong; Xie, Mingyi; Brown, Andrew F; Bley, Christopher J; Podlevsky, Joshua D; Chen, Julian J-L

    2012-01-01

    Telomerase synthesizes telomeric DNA repeats onto chromosome termini from an intrinsic RNA template. The processive synthesis of DNA repeats relies on a unique, yet poorly understood, mechanism whereby the telomerase RNA template translocates and realigns with the DNA primer after synthesizing each repeat. Here, we provide evidence that binding of the realigned RNA/DNA hybrid by the active site is an essential step for template translocation. Employing a template-free human telomerase system, we demonstrate that the telomerase active site directly binds to RNA/DNA hybrid substrates for DNA polymerization. In telomerase processivity mutants, the template-translocation efficiency correlates with the affinity for the RNA/DNA hybrid substrate. Furthermore, the active site is unoccupied during template translocation as a 5 bp extrinsic RNA/DNA hybrid effectively reduces the processivity of the template-containing telomerase. This suggests that strand separation and template realignment occur outside the active site, preceding the binding of realigned hybrid to the active site. Our results provide new insights into the ancient RNA/DNA hybrid binding ability of telomerase and its role in template translocation. PMID:21989387

  10. Organizational and Technical Considerations for the Implementation of a Digital Orthopaedic Templating System.

    Science.gov (United States)

    Ramme, Austin J; Iorio, Richard; Smiaronksi, John; Wronka, Andrew; Rodriguez, George; Specht, Larry; Chang, Gregory; Egol, Kenneth A

    2016-11-01

    Digital templating systems have been promoted due to their ability to reduce costs, facilitate preoperative planning, and maintain surgical accuracy. The implementation of a templating system at a large institution is complicated and has not been fully described. We aim to explain the requisite collaboration between orthopaedic surgery, radiology, and information technology needed to implement a successful orthopaedic templating system at a large institution. A search of the PubMed database was performed to provide a comprehensive review of digital templating. Furthermore, we offer the organizational and technical details needed to implement an institutional templating system. We have provided a strategic plan to describe the collaboration between orthopaedic surgery, musculoskeletal radiology, and information technology required for a successful templating system. The transition to digital templating requires planning, training, and communication between multiple disciplines. Digital templating systems have the potential to foster preoperative planning, improve trainee education, and reduce departmental costs. Preoperative digital templating is a means to reduce the risk of intraoperative fracture, decrease overall surgical time, and plan for implant size prior to surgery.

  11. Template-directed synthesis of linear porphyrin oligomers: classical, Vernier and mutual Vernier.

    Science.gov (United States)

    Kamonsutthipaijit, Nuntaporn; Anderson, Harry L

    2017-04-01

    Three different types of template-directed syntheses of linear porphyrin oligomers are presented. In the classical approach the product has the same number of binding sites as the template, whereas in Vernier reactions the product has the lowest common multiple of the numbers of binding sites in the template and the building block. Mutual Vernier templating is like Vernier templating except that both strands of the Vernier complex undergo coupling simultaneously, so that it becomes impossible to say which is the 'template' and which is the 'building block'. The template-directed synthesis of monodisperse linear oligomers is more difficult than that of cyclic oligomers, because the products of linear templating have reactive ends. All three types of templating are demonstrated here, and used to prepare a nickel(ii) porphyrin dodecamer with 4-pyridyl substituents on all twelve porphyrin units. The stabilities and cooperativities of the double-strand complexes involved in these reactions were investigated by UV-vis-NIR titration. The four-rung ladder duplex has a stability constant of about 2 × 1018 M-1 in dichloromethane at 298 K.

  12. Thermal dynamics of silver clusters grown on rippled silica surfaces

    Energy Technology Data Exchange (ETDEWEB)

    Bhatnagar, Mukul, E-mail: mkbh10@gmail.com [FCIPT, Institute for Plasma Research, Gandhinagar, Gujarat (India); Nirma University, Ahmedabad, Gujarat (India); Ranjan, Mukesh [FCIPT, Institute for Plasma Research, Gandhinagar, Gujarat (India); Nirma University, Ahmedabad, Gujarat (India); Jolley, Kenny; Lloyd, Adam; Smith, Roger [Dept. of Mathematical Sciences, Loughborough University, Leicestershire LE11 3TU (United Kingdom); Mukherjee, Subroto [FCIPT, Institute for Plasma Research, Gandhinagar, Gujarat (India); Nirma University, Ahmedabad, Gujarat (India)

    2017-02-15

    Highlights: • Low energy oblique angle ion bombardment forms ripple pattern on silicon surface. • The ripple patterns have wavelengths between 20 and 45 nm and correspondingly low height. • Silver nanoparticles have been deposited at an angle of 70° on patterned silicon templates. • The as-deposited np are annealed in vacuo at temperature of 573 K for a time duration of 1 h. • MD simulation is used to model the process and compare the results to the experiment. • Results show that silver clusters grow preferentially along parallel to the rippled surface. • Mobility of silver atoms depends on the site to which they are bonded on this amorphous surface. • MD simulations show contour ordered coalescence which is dependent on ripple periodicity. - Abstract: Silver nanoparticles have been deposited on silicon rippled patterned templates at an angle of incidence of 70° to the surface normal. The templates are produced by oblique incidence argon ion bombardment and as the fluence increases, the periods and heights of the structures increase. Structures with periods of 20 nm, 35 nm and 45 nm have been produced. Moderate temperature vacuum annealing shows the phenomenon of cluster coalescence following the contour of the more exposed faces of the ripple for the case of 35 nm and 45 nm but not at 20 nm where the silver aggregates into larger randomly distributed clusters. In order to understand this effect, the morphological changes of silver nanoparticles deposited on an asymmetric rippled silica surface are investigated through the use of molecular dynamics simulations for different deposition angles of incidence between 0° and 70° and annealing temperatures between 500 K and 900 K. Near to normal incidence, clusters are observed to migrate over the entire surface but for deposition at 70°, a similar patterning is observed as in the experiment. The random distribution of clusters for the periodicity ≈ of 20 nm is linked to the geometry of the silica

  13. Helical-type surface defects in GaN thin films epitaxially grown on GaN templates at reduced temperatures

    Science.gov (United States)

    Miraglia, P. Q.; Preble, E. A.; Roskowski, A. M.; Einfeldt, S.; Davis, R. F.

    2003-06-01

    Surface pits in the form of v-shaped defects and resulting surface roughening, previously associated solely with InGaN films, were observed and investigated using atomic force microscopy on GaN films grown at 780°C via metalorganic vapor phase epitaxy on conventionally and pendeo-epitaxially deposited GaN thin film templates. The density of the v-shaped defects was similar to the density of threading dislocations of ˜3×10 9 cm -2 (that originate from the heteroepitaxial interface between the GaN template layer and the SiC substrate). Moreover, the v-defect density was diminished with decreases in the dislocation density via increases in the template layer thickness or the use of pendeo-epitaxial seed layers. A concomitant reduction in the full-width half-maxima of the X-ray rocking curves was also observed. A qualitative model is presented that describes the formation of v-shaped defects as a result of interactions between the movement of surface steps, screw-type dislocation cores, and clusters of atoms on the terraces that form under conditions of high surface undercooling.

  14. Studies in clustering theory

    Science.gov (United States)

    Stell, George

    In recent years the properties of percolation models have been studied intensively. The purpose of our project was to develop a general theory of percolation and clustering between particles of arbitrary size and shape, with arbitrary correlations between them. The goal of such a theory includes the treatment of continuum percolation as well as a novel treatment of lattice percolation. We made substantial progress toward this goal. The quantities basic to a description of clustering, the mean cluster size, mean number of clusters, etc., were developed. Concise formulas were given for the terms in such series, and proved, at least for sufficiently low densities, that the series are absolutely convergent. These series can now be used to construct Pade approximants that will allow one to probe the percolation transition. A scaled-particle theory of percolation was developed which gives analytic approximants for the mean number of clusters in a large class of two and three dimensional percolation models. Although this quantity is essential in many applications, e.g., explaining colligative properties, and interpreting low-angle light-scattering data, no systematic studies of it have been done before this work. Recently carried out detailed computer simulations show that the mean number of clusters is given to high accuracy by several of there approximations. Extensions of this work will allow calculation of the complete cluster size distribution.

  15. Document clustering methods, document cluster label disambiguation methods, document clustering apparatuses, and articles of manufacture

    Science.gov (United States)

    Sanfilippo, Antonio [Richland, WA; Calapristi, Augustin J [West Richland, WA; Crow, Vernon L [Richland, WA; Hetzler, Elizabeth G [Kennewick, WA; Turner, Alan E [Kennewick, WA

    2009-12-22

    Document clustering methods, document cluster label disambiguation methods, document clustering apparatuses, and articles of manufacture are described. In one aspect, a document clustering method includes providing a document set comprising a plurality of documents, providing a cluster comprising a subset of the documents of the document set, using a plurality of terms of the documents, providing a cluster label indicative of subject matter content of the documents of the cluster, wherein the cluster label comprises a plurality of word senses, and selecting one of the word senses of the cluster label.

  16. Introduction to cluster dynamics

    CERN Document Server

    Reinhard, Paul-Gerhard

    2008-01-01

    Clusters as mesoscopic particles represent an intermediate state of matter between single atoms and solid material. The tendency to miniaturise technical objects requires knowledge about systems which contain a ""small"" number of atoms or molecules only. This is all the more true for dynamical aspects, particularly in relation to the qick development of laser technology and femtosecond spectroscopy. Here, for the first time is a highly qualitative introduction to cluster physics. With its emphasis on cluster dynamics, this will be vital to everyone involved in this interdisciplinary subje

  17. The concept of cluster

    DEFF Research Database (Denmark)

    Laursen, Lea Louise Holst; Møller, Jørgen

    2013-01-01

    villages in order to secure their future. This paper will address the concept of cluster-villages as a possible approach to strengthen the conditions of contemporary Danish villages. Cluster-villages is a concept that gather a number of villages in a network-structure where the villages both work together...... to forskellige positioner ser vi en ny mulighed for landsbyudvikling, som vi kalder Clustervillages. In order to investigate the potentials and possibilities of the cluster-village concept the paper will seek to unfold the concept strategically; looking into the benefits of such concept. Further, the paper seeks...

  18. Partially supervised speaker clustering.

    Science.gov (United States)

    Tang, Hao; Chu, Stephen Mingyu; Hasegawa-Johnson, Mark; Huang, Thomas S

    2012-05-01

    Content-based multimedia indexing, retrieval, and processing as well as multimedia databases demand the structuring of the media content (image, audio, video, text, etc.), one significant goal being to associate the identity of the content to the individual segments of the signals. In this paper, we specifically address the problem of speaker clustering, the task of assigning every speech utterance in an audio stream to its speaker. We offer a complete treatment to the idea of partially supervised speaker clustering, which refers to the use of our prior knowledge of speakers in general to assist the unsupervised speaker clustering process. By means of an independent training data set, we encode the prior knowledge at the various stages of the speaker clustering pipeline via 1) learning a speaker-discriminative acoustic feature transformation, 2) learning a universal speaker prior model, and 3) learning a discriminative speaker subspace, or equivalently, a speaker-discriminative distance metric. We study the directional scattering property of the Gaussian mixture model (GMM) mean supervector representation of utterances in the high-dimensional space, and advocate exploiting this property by using the cosine distance metric instead of the euclidean distance metric for speaker clustering in the GMM mean supervector space. We propose to perform discriminant analysis based on the cosine distance metric, which leads to a novel distance metric learning algorithm—linear spherical discriminant analysis (LSDA). We show that the proposed LSDA formulation can be systematically solved within the elegant graph embedding general dimensionality reduction framework. Our speaker clustering experiments on the GALE database clearly indicate that 1) our speaker clustering methods based on the GMM mean supervector representation and vector-based distance metrics outperform traditional speaker clustering methods based on the “bag of acoustic features” representation and statistical

  19. Raspberry Pi super cluster

    CERN Document Server

    Dennis, Andrew K

    2013-01-01

    This book follows a step-by-step, tutorial-based approach which will teach you how to develop your own super cluster using Raspberry Pi computers quickly and efficiently.Raspberry Pi Super Cluster is an introductory guide for those interested in experimenting with parallel computing at home. Aimed at Raspberry Pi enthusiasts, this book is a primer for getting your first cluster up and running.Basic knowledge of C or Java would be helpful but no prior knowledge of parallel computing is necessary.

  20. Spanning Tree Based Attribute Clustering

    DEFF Research Database (Denmark)

    Zeng, Yifeng; Jorge, Cordero Hernandez

    2009-01-01

    inconsistent edges from a maximum spanning tree by starting appropriate initial modes, therefore generating stable clusters. It discovers sound clusters through simple graph operations and achieves significant computational savings. We compare the Star Discovery algorithm against earlier attribute clustering...

  1. Tune Your Brown Clustering, Please

    DEFF Research Database (Denmark)

    Derczynski, Leon; Chester, Sean; Bøgh, Kenneth Sejdenfaden

    2015-01-01

    Brown clustering, an unsupervised hierarchical clustering technique based on ngram mutual information, has proven useful in many NLP applications. However, most uses of Brown clustering employ the same default configuration; the appropriateness of this configuration has gone predominantly...

  2. Integrated Nanosystems Templated by Self-assembled Virus Capsids

    Science.gov (United States)

    Stephanopoulos, Nicholas

    This dissertation presents the synthesis and modeling of multicomponent nanosystems templated by self-assembled virus capsids. The design principles, synthesis, analysis, and future directions for these capsid-based materials are presented. Chapter 1 gives an overview of the literature on the application of virus capsids in constructing nanomaterials. The uses of capsids in three main areas are considered: (1) as templates for inorganic materials or nanoparticles; (2) as vehicles for biological applications like medical imaging and treatment; and (3) as scaffolds for catalytic materials. In light of this introduction, an overview of the material in this dissertation is described. Chapters 2-4 all describe integrated nanosystems templated by bacteriophage MS2, a spherical icosahedral virus capsid. MS2 possesses an interior and exterior surface that can be modified orthogonally using bioconjugation chemistry to create multivalent, multicomponent constructs with precise localization of components attached to the capsid proteins. Chapter 2 describes the use of MS2 to synthesize a photocatalytic construct by modifying the internal surface with sensitizing chromophores and the external surface with a photocatalytic porphyrin. The chromophores absorbed energy that the porphyrin could not, and transferred it to the porphyrin via FRET through the protein shell. The porphyrin was then able to utilize the energy to carry out photocatalysis at new wavelengths. In Chapter 3, porphyrins were installed on the interior surface of MS2 and DNA aptamers specific for Jurkat leukemia T cells on the exterior surface. The dual-modified capsids were able to bind to Jurkat cells, and upon illumination the porphyrins generated singlet oxygen to kill them selectively over non-targeted cells. Chapter 4 explores integrating MS2 with DNA origami in order to arrange the capsids at larger length scales. Capsids modified with fluorescent dyes inside and single-stranded DNA outside were able to

  3. Analytic family of post-merger template waveforms

    Science.gov (United States)

    Del Pozzo, Walter; Nagar, Alessandro

    2017-06-01

    Building on the analytical description of the post-merger (ringdown) waveform of coalescing, nonprecessing, spinning binary black holes introduced by Damour and Nagar [Phys. Rev. D 90, 024054 (2014), 10.1103/PhysRevD.90.024054], we propose an analytic, closed form, time-domain, representation of the ℓ=m =2 gravitational radiation mode emitted after merger. This expression is given as a function of the component masses and dimensionless spins (m1 ,2,χ1 ,2) of the two inspiraling objects, as well as of the mass MBH and (complex) frequency σ1 of the fundamental quasinormal mode of the remnant black hole. Our proposed template is obtained by fitting the post-merger waveform part of several publicly available numerical relativity simulations from the Simulating eXtreme Spacetimes (SXS) catalog and then suitably interpolating over (symmetric) mass ratio and spins. We show that this analytic expression accurately reproduces (˜0.01 rad ) the phasing of the post-merger data of other data sets not used in its construction. This is notably the case of the spin-aligned run SXS:BBH:0305, whose intrinsic parameters are consistent with the 90% credible intervals reported in the parameter-estimation followup of GW150914 by B.P. Abbott et al. [Phys. Rev. Lett. 116, 241102 (2016), 10.1103/PhysRevLett.116.241102]. Using SXS waveforms as "experimental" data, we further show that our template could be used on the actual GW150914 data to perform a new measure of the complex frequency of the fundamental quasinormal mode so as to exploit the complete (high signal-to-noise-ratio) post-merger waveform. We assess the usefulness of our proposed template by analyzing, in a realistic setting, SXS full inspiral-merger-ringdown waveforms and constructing posterior probability distribution functions for the central frequency damping time of the first overtone of the fundamental quasinormal mode as well as for the physical parameters of the systems. We also briefly explore the possibility

  4. Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein.

    Science.gov (United States)

    Poppe, Juliane; Warkentin, Eberhard; Demmer, Ulrike; Kowalewski, Björn; Dierks, Thomas; Schneider, Klaus; Ermler, Ulrich

    2014-09-01

    The molybdenum storage protein (MoSto) can store more than 100 Mo or W atoms as discrete polyoxometalate (POM) clusters. Here, we describe the three POM cluster sites along the threefold axis of the protein complex based on four X-ray structures with slightly different polyoxomolybdate compositions between 1.35 and 2 Å resolution. In contrast to the Moα-out binding site occupied by an Mo3 cluster, the Moα-in and Moβ binding sites contain rather weak and non-uniform electron density for the Mo atoms (but clearly identifiable by anomalous data), suggesting the presence of POM cluster ensembles and/or degradation products of larger aggregates. The "Moα-in cluster ensemble" was interpreted as an antiprism-like Mo6 species superimposed with an Mo7 pyramide and the "Moβ cluster ensemble" as an Mo13 cluster (present mostly in a degraded form) composed of a pyramidal Mo7 and a Mo3 building block linked by three spatially separated MoOx units. Inside the ball-shaped Mo13 cluster sits an occluded central atom, perhaps a metal ion. POM cluster formation at the Moα-in and Moβ sites appears to be driven by filtering out and binding/protecting self-assembled transient species complementary to the protein template. Copyright © 2014 Elsevier Inc. All rights reserved.

  5. Preformed template fluctuations promote fibril formation: Insights from lattice and all-atom models

    Energy Technology Data Exchange (ETDEWEB)

    Kouza, Maksim, E-mail: mkouza@chem.uw.edu.pl; Kolinski, Andrzej [Faculty of Chemistry, University of Warsaw, ul. Pasteura 1, 02-093 Warszaw (Poland); Co, Nguyen Truong [Department of Physics, Institute of Technology, National University of HCM City, 268 Ly Thuong Kiet Street, District 10, Ho Chi Minh City (Viet Nam); Institute for Computational Science and Technology, Quang Trung Software City, Tan Chanh Hiep Ward, District 12, Ho Chi Minh City (Viet Nam); Nguyen, Phuong H. [Laboratoire de Biochimie Theorique, UPR 9080 CNRS, IBPC, Universite Paris 7, 13 rue Pierre et Marie Curie, 75005 Paris (France); Li, Mai Suan, E-mail: masli@ifpan.edu.pl [Institute of Physics, Polish Academy of Sciences, Al. Lotnikow 32/46, 02-668 Warsaw (Poland)

    2015-04-14

    Fibril formation resulting from protein misfolding and aggregation is a hallmark of several neurodegenerative diseases such as Alzheimer’s and Parkinson’s diseases. Despite the fact that the fibril formation process is very slow and thus poses a significant challenge for theoretical and experimental studies, a number of alternative pictures of molecular mechanisms of amyloid fibril formation have been recently proposed. What seems to be common for the majority of the proposed models is that fibril elongation involves the formation of pre-nucleus seeds prior to the creation of a critical nucleus. Once the size of the pre-nucleus seed reaches the critical nucleus size, its thermal fluctuations are expected to be small and the resulting nucleus provides a template for sequential (one-by-one) accommodation of added monomers. The effect of template fluctuations on fibril formation rates has not been explored either experimentally or theoretically so far. In this paper, we make the first attempt at solving this problem by two sets of simulations. To mimic small template fluctuations, in one set, monomers of the preformed template are kept fixed, while in the other set they are allowed to fluctuate. The kinetics of addition of a new peptide onto the template is explored using all-atom simulations with explicit water and the GROMOS96 43a1 force field and simple lattice models. Our result demonstrates that preformed template fluctuations can modulate protein aggregation rates and pathways. The association of a nascent monomer with the template obeys the kinetics partitioning mechanism where the intermediate state occurs in a fraction of routes to the protofibril. It was shown that template immobility greatly increases the time of incorporating a new peptide into the preformed template compared to the fluctuating template case. This observation has also been confirmed by simulation using lattice models and may be invoked to understand the role of template fluctuations in

  6. Computational resources to filter gravitational wave data with P-approximant templates

    Science.gov (United States)

    Porter, Edward K.

    2002-08-01

    The prior knowledge of the gravitational waveform from compact binary systems makes matched filtering an attractive detection strategy. This detection method involves the filtering of the detector output with a set of theoretical waveforms or templates. One of the most important factors in this strategy is knowing how many templates are needed in order to reduce the loss of possible signals. In this study, we calculate the number of templates and computational power needed for a one-step search for gravitational waves from inspiralling binary systems. We build on previous works by first expanding the post-Newtonian waveforms to 2.5-PN order and second, for the first time, calculating the number of templates needed when using P-approximant waveforms. The analysis is carried out for the four main first-generation interferometers, LIGO, GEO600, VIRGO and TAMA. As well as template number, we also calculate the computational cost of generating banks of templates for filtering GW data. We carry out the calculations for two initial conditions. In the first case we assume a minimum individual mass of 1 Msolar and in the second, we assume a minimum individual mass of 5 Msolar. We find that, in general, we need more P-approximant templates to carry out a search than if we use standard PN templates. This increase varies according to the order of PN-approximation, but can be as high as a factor of 3 and is explained by the smaller span of the P-approximant templates as we go to higher masses. The promising outcome is that for 2-PN templates, the increase is small and is outweighed by the known robustness of the 2-PN P-approximant templates.

  7. Computational resources to filter gravitational wave data with P-approximant templates

    Energy Technology Data Exchange (ETDEWEB)

    Porter, Edward K [Department of Physics and Astronomy, Cardiff University, 5 The Parade, Cardiff CF24 3YB, UK (United Kingdom)

    2002-08-21

    The prior knowledge of the gravitational waveform from compact binary systems makes matched filtering an attractive detection strategy. This detection method involves the filtering of the detector output with a set of theoretical waveforms or templates. One of the most important factors in this strategy is knowing how many templates are needed in order to reduce the loss of possible signals. In this study, we calculate the number of templates and computational power needed for a one-step search for gravitational waves from inspiralling binary systems. We build on previous works by first expanding the post-Newtonian waveforms to 2.5-PN order and second, for the first time, calculating the number of templates needed when using P-approximant waveforms. The analysis is carried out for the four main first-generation interferometers, LIGO, GEO600, VIRGO and TAMA. As well as template number, we also calculate the computational cost of generating banks of templates for filtering GW data. We carry out the calculations for two initial conditions. In the first case we assume a minimum individual mass of 1 M{sub o-dot} and in the second, we assume a minimum individual mass of 5 M{sub o-dot}. We find that, in general, we need more P-approximant templates to carry out a search than if we use standard PN templates. This increase varies according to the order of PN-approximation, but can be as high as a factor of 3 and is explained by the smaller span of the P-approximant templates as we go to higher masses. The promising outcome is that for 2-PN templates, the increase is small and is outweighed by the known robustness of the 2-PN P-approximant templates.

  8. The Appropriateness of Language Found in Research Consent Form Templates: A Computational Linguistic Analysis.

    Science.gov (United States)

    Villafranca, Alexander; Kereliuk, Stephanie; Hamlin, Colin; Johnson, Andrea; Jacobsohn, Eric

    2017-01-01

    To facilitate informed consent, consent forms should use language below the grade eight level. Research Ethics Boards (REBs) provide consent form templates to facilitate this goal. Templates with inappropriate language could promote consent forms that participants find difficult to understand. However, a linguistic analysis of templates is lacking. We reviewed the websites of 124 REBs for their templates. These included English language medical school REBs in Australia/New Zealand (n = 23), Canada (n = 14), South Africa (n = 8), the United Kingdom (n = 34), and a geographically-stratified sample from the United States (n = 45). Template language was analyzed using Coh-Metrix linguistic software (v.3.0, Memphis, USA). We evaluated the proportion of REBs with five key linguistic outcomes at or below grade eight. Additionally, we compared quantitative readability to the REBs' own readability standards. To determine if the template's country of origin or the presence of a local REB readability standard influenced the linguistic variables, we used a MANOVA model. Of the REBs who provided templates, 0/94 (0%, 95% CI = 0-3.9%) provided templates with all linguistic variables at or below the grade eight level. Relaxing the standard to a grade 12 level did not increase this proportion. Further, only 2/22 (9.1%, 95% CI = 2.5-27.8) REBs met their own readability standard. The country of origin (DF = 20, 177.5, F = 1.97, p = 0.01), but not the presence of an REB-specific standard (DF = 5, 84, F = 0.73, p = 0.60), influenced the linguistic variables. Inappropriate language in templates is an international problem. Templates use words that are long, abstract, and unfamiliar. This could undermine the validity of participant informed consent. REBs should set a policy of screening templates with linguistic software.

  9. Galaxy clusters and cosmology

    CERN Document Server

    White, S

    1994-01-01

    Galaxy clusters are the largest coherent objects in Universe. It has been known since 1933 that their dynamical properties require either a modification of the theory of gravity, or the presence of a dominant component of unseen material of unknown nature. Clusters still provide the best laboratories for studying the amount and distribution of this dark matter relative to the material which can be observed directly -- the galaxies themselves and the hot,X-ray-emitting gas which lies between them.Imaging and spectroscopy of clusters by satellite-borne X -ray telescopes has greatly improved our knowledge of the structure and composition of this intergalactic medium. The results permit a number of new approaches to some fundamental cosmological questions,but current indications from the data are contradictory. The observed irregularity of real clusters seems to imply recent formation epochs which would require a universe with approximately the critical density. On the other hand, the large baryon fraction observ...

  10. CSR in Industrial Clusters

    DEFF Research Database (Denmark)

    Lund-Thomsen, Peter; Pillay, Renginee G.

    2012-01-01

    Purpose – The paper seeks to review the literature on CSR in industrial clusters in developing countries, identifying the main strengths, weaknesses, and gaps in this literature, pointing to future research directions and policy implications in the area of CSR and industrial cluster development....... Design/methodology/approach – A literature review is conducted of both academic and policy-oriented writings that contain the keywords “industrial clusters” and “developing countries” in combination with one or more of the following terms: corporate social responsibility, environmental management, labor...... in this field and their comments incorporated in the final version submitted to Corporate Governance. Findings – The article traces the origins of the debate on industrial clusters and CSR in developing countries back to the early 1990s when clusters began to be seen as an important vehicle for local economic...

  11. Evolution of clustered storage

    CERN Multimedia

    CERN. Geneva; Van de Vyvre, Pierre

    2007-01-01

    The session actually featured two presentations: * Evolution of clustered storage by Lance Hukill, Quantum Corporation * ALICE DAQ - Usage of a Cluster-File System: Quantum StorNext by Pierre Vande Vyvre, CERN-PH the second one prepared at short notice by Pierre (thanks!) to present how the Quantum technologies are being used in the ALICE experiment. The abstract to Mr Hukill's follows. Clustered Storage is a technology that is driven by business and mission applications. The evolution of Clustered Storage solutions starts first at the alignment between End-users needs and Industry trends: * Push-and-Pull between managing for today versus planning for tomorrow * Breaking down the real business problems to the core applications * Commoditization of clients, servers, and target devices * Interchangeability, Interoperability, Remote Access, Centralized control * Oh, and yes, there is a budget and the "real world" to deal with This presentation will talk through these needs and trends, and then ask the question, ...

  12. How Clusters Work

    Science.gov (United States)

    Technology innovation clusters are geographic concentrations of interconnected companies, universities, and other organizations with a focus on environmental technology. They play a key role in addressing the nation’s pressing environmental problems.

  13. Air void clustering.

    Science.gov (United States)

    2015-06-01

    Air void clustering around coarse aggregate in concrete has been identified as a potential source of : low strengths in concrete mixes by several Departments of Transportation around the country. Research was : carried out to (1) develop a quantitati...

  14. Clustering of Emerging Flux

    Science.gov (United States)

    Ruzmaikin, A.

    1997-01-01

    Observations show that newly emerging flux tends to appear on the Solar surface at sites where there is flux already. This results in clustering of solar activity. Standard dynamo theories do not predict this effect.

  15. Globular clusters with Gaia

    Science.gov (United States)

    Pancino, E.; Bellazzini, M.; Giuffrida, G.; Marinoni, S.

    2017-05-01

    The treatment of crowded fields in Gaia data will only be a reality in a few years from now. In particular, for globular clusters, only the end-of-mission data (public in 2022-2023) will have the necessary full crowding treatment and will reach sufficient quality for the faintest stars. As a consequence, the work on the deblending and decontamination pipelines is still ongoing. We describe the present status of the pipelines for different Gaia instruments, and we model the end-of-mission crowding errors on the basis of available information. We then apply the nominal post-launch Gaia performances, appropriately worsened by the estimated crowding errors, to a set of 18 simulated globular clusters with different concentration, distance and field contamination. We conclude that there will be 103-104 stars with astrometric performances virtually untouched by crowding (contaminated by <1 mmag) in the majority of clusters. The most limiting factor will be field crowding, not cluster crowding: the most contaminated clusters will only contain 10-100 clean stars. We also conclude that (i) the systemic proper motions and parallaxes will be determined to 1 per cent or better up to ≃15 kpc, and the nearby clusters will have radial velocities to a few km s-1; (ii) internal kinematics will be of unprecedented quality, cluster masses will be determined to ≃10 per cent up to 15 kpc and beyond, and it will be possible to identify differences of a few km s-1 or less in the kinematics (if any) of cluster sub-populations up to 10 kpc and beyond; (iii) the brightest stars (V ≃ 17 mag) will have space-quality, wide-field photometry (mmag errors), and all Gaia photometry will have 1-3 per cent errors on the absolute photometric calibration.

  16. Structure of Silicon Clusters

    OpenAIRE

    Pan, Jun; Bahel, Atul; Ramakrishna, Mushti V.

    1995-01-01

    We determined the structures of silicon clusters in the 11-14 atom size range using the tight-binding molecular dynamics method. These calculations reveal that \\Si{11} is an icosahedron with one missing cap, \\Si{12} is a complete icosahedron, \\Si{13} is a surface capped icosahedron, and \\Si{14} is a 4-4-4 layer structure with two caps. The characteristic feature of these clusters is that they are all surface.

  17. Anisotropy engineering using exchange bias on antidot templates

    Directory of Open Access Journals (Sweden)

    F. J. T. Goncalves

    2015-06-01

    Full Text Available We explore an emerging device concept based on exchange bias used in conjunction with an antidot geometry to fine tune ferromagnetic resonances. Planar cavity ferromagnetic resonance is used to study the microwave response of NiO/NiFe bilayers with antidot structuring. A large frequency asymmetry with respect to an applied magnetic field is found across a broad field range whose underlying cause is linked to the distribution of magnetic poles at the antidot surfaces. This distribution is found to be particularly sensitive to the effects of exchange bias, and robust in regards to the quality of the antidot geometry. The template based antidot geometry we study offers advantages for practical device construction, and we show that it is suitable for broadband absorption and filtering applications, allowing tunable anisotropies via interface engineering.

  18. Database extraction strategies for low-template evidence.

    Science.gov (United States)

    Bleka, Øyvind; Dørum, Guro; Haned, Hinda; Gill, Peter

    2014-03-01

    Often in forensic cases, the profile of at least one of the contributors to a DNA evidence sample is unknown and a database search is needed to discover possible perpetrators. In this article we consider two types of search strategies to extract suspects from a database using methods based on probability arguments. The performance of the proposed match scores is demonstrated by carrying out a study of each match score relative to the level of allele drop-out in the crime sample, simulating low-template DNA. The efficiency was measured by random man simulation and we compared the performance using the SGM Plus kit and the ESX 17 kit for the Norwegian population, demonstrating that the latter has greatly enhanced power to discover perpetrators of crime in large national DNA databases. The code for the database extraction strategies will be prepared for release in the R-package forensim. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

  19. Photonic hyperuniform networks by silicon double inversion of polymer templates

    CERN Document Server

    Muller, Nicolas; Marichy, Catherine; Scheffold, Frank

    2016-01-01

    Hyperuniform disordered networks belong to a peculiar class of structured materials predicted to possess partial and complete photonic bandgaps for relatively moderate refractive index contrasts. The practical realization of such photonic designer materials is challenging however, as it requires control over a multi-step fabcrication process on optical length scales. Here we report the direct-laser writing of hyperuniform polymeric templates followed by a silicon double inversion procedure leading to high quality network structures made of polycrystalline silicon. We observe a pronounced gap in the shortwave infrared centered at a wavelength of $\\lambda_{\\text{Gap}}\\simeq $ 2.5 $\\mu$m, in nearly quantitative agreement with numerical simulations. In the experiments the typical structural length scale of the seed pattern can be varied between 2 $\\mu$m and 1.54 $\\mu$m leading to a blue-shift of the gap accompanied by an increase of the silicon volume filling fraction.

  20. Growth of hollow cell spheroids in microbead templated chambers.

    Science.gov (United States)

    Wang, Eddie; Wang, Dong; Geng, Andrew; Seo, Richard; Gong, Xiaohua

    2017-10-01

    Cells form hollow, spheroidal structures during the development of many tissues, including the ocular lens, inner ear, and many glands. Therefore, techniques for in vitro formation of hollow spheroids are valued for studying developmental and disease processes. Current in vitro methods require cells to self-organize into hollow morphologies; we explored an alternative strategy based on cell growth in predefined, spherical scaffolds. Our method uses sacrificial, gelatin microbeads to simultaneously template spherical chambers within a hydrogel and deliver cells into the chambers. We use mouse lens epithelial cells to demonstrate that cells can populate the internal surfaces of the chambers within a week to create numerous hollow spheroids. The platform supports manipulation of matrix mechanics, curvature, and biochemical composition to mimic in vivo microenvironments. It also provides a starting point for engineering organoids of tissues that develop from hollow spheroids. Copyright © 2017 Elsevier Ltd. All rights reserved.

  1. Individuelle Templates für Rekonstruktionen des linken Herzventrikels

    Science.gov (United States)

    Feder, Stefan; Falk, Volkmar; Gutberiet, Matthias; Bartz, Dirk

    Bei krankhaften Vergrößerungen des linken Herzventrikels kann eine chirurgische Ventrikelrekonstruktion zur Verbesserung der Herzleistung beitragen. Die dabei erstellte Ventrikelgeometrie ist von entscheidender Bedeutung. Diese Studie befasst sich mit der computerbasierten Planung von individuellen Schablonen (Templates) für Ventrikelrekonstruktionen. Ziel ist es aus Cardio-CT-Daten, präoperativ, patientenindividuelle 3D-Modelle für Ventrikeltemplates zu erstellen. Hierfür wird aus CT-Daten der linksventrikuläre Blutpool segmentiert und daraus das Ventrikeltemplate modelliert. Dies geschieht anhand von zwei Kriterien: dem physiologischen Ventrikelfüllungsvolumen und der hämodynamisch günstigen ellipsoiden Form. Es konnten 20 3D-Templatemodelle mit einem durchschnittlichen Volumen von 144 ml erstellt werden. Die ellipsoide Form konnte durch manuelle Modellierung erreicht werden. Der Nachweis verbesserter Operationsergebnisse muss in nachfolgenden klinischen Studien erbracht werden.

  2. Template synthesis and characterization of carbon nanomaterials from ferrocene crystals

    Energy Technology Data Exchange (ETDEWEB)

    Cherkasov, Nikolay, E-mail: zdx@gmx.com [Lomonosov Moscow State University, Department of Chemistry, 119991, Moscow (Russian Federation); Savilov, Serguei V.; Ivanov, Anton S.; Egorov, Alex V.; Lunin, Valery V. [Lomonosov Moscow State University, Department of Chemistry, 119991, Moscow (Russian Federation); Ibhadon, Alex O. [School of Biological, Biomedical and Environmental Sciences and Department of Chemistry, University of Hull, Cottingham Road, Hull HU6 7RX (United Kingdom)

    2014-07-01

    Filamentous ribbon-like structures of highly disordered carbon of thickness 10–100 nm built from merged individual carbon nanofibers were synthesised by chemical vapour deposition from saturated ferrocene–benzene solution at 950 K. The materials obtained were characterized by electron microscopy, x-ray and electron diffraction, Raman spectroscopy and a possible growth mechanism for their formation was proposed and discussed. The synthesis demonstrates the possibility of a template growth of carbon nanomaterials and supports the vapour–solid–solid growth model of carbon materials because the catalysing metal particles are solid under the experimental conditions. Due to the large number of structural defects, filamentous structure, submicrometer thickness and low intraparticle diffusion of the nanomaterials, they can find application in catalysis as catalyst supports and sorbents.

  3. Silica needle template fabrication of metal hollow microneedle arrays

    Science.gov (United States)

    Zhu, M. W.; Li, H. W.; Chen, X. L.; Tang, Y. F.; Lu, M. H.; Chen, Y. F.

    2009-11-01

    Drug delivery through hollow microneedle (HMN) arrays has now been recognized as one of the most promising techniques because it minimizes the shortcomings of the traditional drug delivery methods and has many exciting advantages—pain free and tunable release rates, for example. However, this drug delivery method has been hindered greatly from mass clinical application because of the high fabrication cost of HMN arrays. Hence, we developed a simple and cost-effective procedure using silica needles as templates to massively fabricate HMN arrays by using popular materials and industrially applicable processes of micro- imprint, hot embossing, electroplating and polishing. Metal HMN arrays with high quality are prepared with great flexibility with tunable parameters of area, length of needle, size of hollow and array dimension. This efficient and cost-effective fabrication method can also be applied to other applications after minor alterations, such as preparation of optic, acoustic and solar harvesting materials and devices.

  4. Precise organization of metal nanoparticles on DNA origami template.

    Science.gov (United States)

    Liu, Qing; Song, Chen; Wang, Zhen-Gang; Li, Na; Ding, Baoquan

    2014-05-15

    Nanoscale assemblies of metal nanoparticles in one dimension (1D) to three dimensions (3D) can exhibit novel phenomena that are not observed in the amorphous state. Bottom-up assembly technique is expected to overcome the resolution limit of top-down method and casts a new light on the nanofabrication field. DNA origami, which is mainly used to construct discrete and addressable nanostructures, can be utilized to assemble functional colloidal nanoparticles into delicate geometries with interesting properties. This review aims to summarize the methods that use DNA origami structures as templates to precisely organize metal nanoparticles, such as gold nanospheres (AuNSs) gold nanorods (AuNRs) and silver nanoparticles (AgNPs). The potential applications and the perspective are also discussed. Copyright © 2013 Elsevier Inc. All rights reserved.

  5. Assembling Bare Au Nanoparticles at Positively Charged Templates

    Science.gov (United States)

    Wang, Wenjie; Zhang, Honghu; Kuzmenko, Ivan; Mallapragada, Surya; Vaknin, David

    2016-05-01

    In-situ X-ray reflectivity (XRR) and grazing incidence X-ray small-angle scattering (GISAXS) reveal that unfunctionalized (bare) gold nanoparticles (AuNP) spontaneously adsorb to a cationic lipid template formed by a Langmuir monolayer of DPTAP (1,2-dihexadecanoyl-3-trimethylammonium-propane) at vapor/aqueous interfaces. Analysis of the XRR yields the electron density profile across the charged-interfaces along the surface normal showing the AuNPs assemble with vertical thickness comparable to the particle size. The GISAXS analysis indicates that the adsorbed mono-particle layer exhibits short-range in-plane correlations. By contrast, single-stranded DNA-functionalized AuNPs, while attracted to the positively charged surface (more efficiently with the addition of salt to the solution), display less in-plane regular packing compared to bare AuNPs.

  6. Assembling Bare Au Nanoparticles at Positively Charged Templates

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Wenjie; Zhang, Honghu; Kuzmenko, Ivan; Mallapragada, Surya; Vaknin, David

    2016-05-26

    In-situ X-ray reflectivity (XRR) and grazing incidence X-ray small-angle scattering (GISAXS) reveal that unfunctionalized (bare) gold nanoparticles (AuNP) spontaneously adsorb to a cationic lipid template formed by a Langmuir monolayer of DPTAP (1,2-dihexadecanoyl-3-trimethylammonium-propane) at vapor/aqueous interfaces. Analysis of the XRR yields the electron density profile across the chargedinterfaces along the surface normal showing the AuNPs assemble with vertical thickness comparable to the particle size. The GISAXS analysis indicates that the adsorbed mono-particle layer exhibits shortrange in-plane correlations. By contrast, single-stranded DNA-functionalized AuNPs, while attracted to the positively charged surface (more efficiently with the addition of salt to the solution), display less in-plane regular packing compared to bare AuNPs.

  7. Liquid Crystal Elastomer Actuators from Anisotropic Porous Polymer Template.

    Science.gov (United States)

    Wang, Qian; Yu, Li; Yu, Meina; Zhao, Dongyu; Song, Ping; Chi, Hun; Guo, Lin; Yang, Huai

    2017-08-01

    Controlling self-assembly behaviors of liquid crystals is a fundamental issue for designing them as intelligent actuators. Here, anisotropic porous polyvinylidene fluoride film is utilized as a template to induce homogeneous alignment of liquid crystals. The mechanism of liquid crystal alignment induced by anisotropic porous polyvinylidene fluoride film is illustrated based on the relationship between the alignment behavior of liquid crystals and surface microstructure of anisotropic polyvinylidene fluoride film. Liquid crystal elastomer actuators with fast responsiveness, large strain change, and reversible actuation behaviors are achieved by the photopolymerization of liquid crystal monomer in liquid crystal cells coated with anisotropic porous films. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  8. Pseudo-template synthesis of gold nanoparticles based on polyhydrosilanes

    Energy Technology Data Exchange (ETDEWEB)

    Sacarescu, Liviu, E-mail: livius@icmpp.ro [Petru Poni Institute of Macromolecular Chemistry, Aleea Grigore Ghica Voda 41A, Iasi 700487 (Romania); Simionescu, Mihaela; Sacarescu, Gabriela [Petru Poni Institute of Macromolecular Chemistry, Aleea Grigore Ghica Voda 41A, Iasi 700487 (Romania)

    2011-02-01

    Highly stable colloidal gold nanoparticles are obtained in a pseudo-template system using a specific polyhydrosilane copolymeric structure. This process takes place in situ by microwaves activation of the polymer solution in a non-polar solvent followed by stirring with solid HAuCl{sub 4} in natural light. The experimental procedure is very simple and the resulted colloidal gold solution is indefinitely stable. The specific surface plasmon resonance absorption band of the gold nanoparticles is strongly red shifted and is strictly related to their size. AFM correlated with DLS analysis showed flattened round shaped colloidal polymer-gold nanoparticles with large diameters. SEM-EDX combined analysis reveals that the polysilane-gold nanoparticles show a natural tendency to auto-assemble in close packed structures which form large areas over the polymer film surface.

  9. Biopolymer colloids for controlling and templating inorganic synthesis

    Directory of Open Access Journals (Sweden)

    Laura C. Preiss

    2014-11-01

    Full Text Available Biopolymers and biopolymer colloids can act as controlling agents and templates not only in many processes in nature, but also in a wide range of synthetic approaches. Inorganic materials can be either synthesized ex situ and later incorporated into a biopolymer structuring matrix or grown in situ in the presence of biopolymers. In this review, we focus mainly on the latter case and distinguish between the following possibilities: (i biopolymers as controlling agents of nucleation and growth of inorganic materials; (ii biopolymers as supports, either as molecular supports or as carrier particles acting as cores of core–shell structures; and (iii so-called “soft templates”, which include on one hand stabilized droplets, micelles, and vesicles, and on the other hand continuous scaffolds generated by gelling biopolymers.

  10. Mixed Surfactant Template Method for Preparation of Nanometer Selenium

    Directory of Open Access Journals (Sweden)

    Zhi-Lin Li

    2009-01-01

    Full Text Available Selenium nanoparticles have been synthesized in an aqueous solution by using sodium dodecyl sulfate and polyvinyl alcohol as a soft template. The factors on synthesis, such as reaction time, concentration of reactants and ultrasonic irradiation were studied. The uniform stable selenium nanospheres were obstained in the conditions of 1.0 (mass fraction sodium dodecyl sulfate, 1.0 (mass fraction polyvinyl alcohol, n(Vc:n(H2SeO3=7:1 and 7 minutes after the initiation of the reaction at room temperature. The average particle size of selenium is about 30 nm. The product was characterized by UV and TEM. Finally the applications of the red element nanometer selenium in anti-older cosmetics are presented.

  11. Electrospun human keratin matrices as templates for tissue regeneration.

    Science.gov (United States)

    Sow, Wan Ting; Lui, Yuan Siang; Ng, Kee Woei

    2013-04-01

    The aim of this work was to study the feasibility of fabricating human hair keratin matrices through electrospinning and to evaluate the potential of these matrices for tissue regeneration. Keratin was extracted from human hair using Na2S and blended with poly(ethylene oxide) in the weight ratio of 60:1 for electrospinning. Physical morphology and chemical properties of the matrices were characterized using scanning electron microscopy and Fourier transform infrared spectroscopy, respectively. Cell viability and morphology of murine and human fibroblasts cultured on the matrices were evaluated through the Live/Dead(®) assay and scanning electron microscopy. Electrospun keratin matrices were successfully produced without affecting the chemical conformation of keratin. Fibroblasts cultured on keratin matrices showed healthy morphology and penetration into matrices at day 7. Electrospun human hair keratin matrices provide a bioinductive and structural environment for cell growth and are thus attractive as alternative templates for tissue regeneration.

  12. A fast template matching method for LED chip Localization

    Directory of Open Access Journals (Sweden)

    Zhong Fuqiang

    2015-01-01

    Full Text Available Efficiency determines the profits of the semiconductor producers. So the producers spare no effort to enhance the efficiency of every procedure. The purpose of the paper is to present a method to shorten the time to locate the LED chips on wafer. The method consists of 3 steps. Firstly, image segmentation and blob analyzation are used to predict the positions of potential chips. Then predict the orientations of potential chips based on their dominant orientations. Finally, according to the positions and orientations predicted above, locate the chips precisely based on gradient orientation features. Experiments show that the algorithm is faster than the traditional method we choose to locate the LED chips. Besides, even the orientations of the chips on wafer are of big deviation to the orientation of the template, the efficiency of this method won't be affected.

  13. Self-templated chemically stable hollow spherical covalent organic framework

    Science.gov (United States)

    Kandambeth, Sharath; Venkatesh, V.; Shinde, Digambar B.; Kumari, Sushma; Halder, Arjun; Verma, Sandeep; Banerjee, Rahul

    2015-04-01

    Covalent organic frameworks are a family of crystalline porous materials with promising applications. Although active research on the design and synthesis of covalent organic frameworks has been ongoing for almost a decade, the mechanisms of formation of covalent organic frameworks crystallites remain poorly understood. Here we report the synthesis of a hollow spherical covalent organic framework with mesoporous walls in a single-step template-free method. A detailed time-dependent study of hollow sphere formation reveals that an inside-out Ostwald ripening process is responsible for the hollow sphere formation. The synthesized covalent organic framework hollow spheres are highly porous (surface area ~1,500 m2 g-1), crystalline and chemically stable, due to the presence of strong intramolecular hydrogen bonding. These mesoporous hollow sphere covalent organic frameworks are used for a trypsin immobilization study, which shows an uptake of 15.5 μmol g-1 of trypsin.

  14. Dynamic fragmentation of cellular, ice-templated alumina scaffolds

    Energy Technology Data Exchange (ETDEWEB)

    Tan, Yi Ming; Cervantes, Octavio; Nam, SeanWoo; Molitoris, John D.; Hooper, Joseph P.

    2016-01-14

    We examine the dynamic failure of ice-templated freeze-cast alumina scaffolds that are being considered as biomimetic hierarchical structures. Three porosities of alumina freeze-cast structures were fabricated, and a systematic variation in microstructural properties such as lamellar width and thickness was observed with changing porosity. Dynamic impact tests were performed in a light-gas gun to examine the failure properties of these materials under high strain-rate loading. Nearly complete delamination was observed following impact, along with characteristic cracking across the lamellar width. Average fragment size decreases with increasing porosity, and a theoretical model was developed to explain this behavior based on microstructural changes. Using an energy balance between kinetic, strain, and surface energies within a single lamella, we are able to accurately predict the characteristic fragment size using only standard material properties of bulk alumina.

  15. Forest gradient response in Sierran landscapes: the physical template

    Science.gov (United States)

    Urban, Dean L.; Miller, Carol; Halpin, Patrick N.; Stephenson, Nathan L.

    2000-01-01

    Vegetation pattern on landscapes is the manifestation of physical gradients, biotic response to these gradients, and disturbances. Here we focus on the physical template as it governs the distribution of mixed-conifer forests in California's Sierra Nevada. We extended a forest simulation model to examine montane environmental gradients, emphasizing factors affecting the water balance in these summer-dry landscapes. The model simulates the soil moisture regime in terms of the interaction of water supply and demand: supply depends on precipitation and water storage, while evapotranspirational demand varies with solar radiation and temperature. The forest cover itself can affect the water balance via canopy interception and evapotranspiration. We simulated Sierran forests as slope facets, defined as gridded stands of homogeneous topographic exposure, and verified simulated gradient response against sample quadrats distributed across Sequoia National Park. We then performed a modified sensitivity analysis of abiotic factors governing the physical gradient. Importantly, the model's sensitivity to temperature, precipitation, and soil depth varies considerably over the physical template, particularly relative to elevation. The physical drivers of the water balance have characteristic spatial scales that differ by orders of magnitude. Across large spatial extents, temperature and precipitation as defined by elevation primarily govern the location of the mixed conifer zone. If the analysis is constrained to elevations within the mixed-conifer zone, local topography comes into play as it influences drainage. Soil depth varies considerably at all measured scales, and is especially dominant at fine (within-stand) scales. Physical site variables can influence soil moisture deficit either by affecting water supply or water demand; these effects have qualitatively different implications for forest response. These results have clear implications about purely inferential approaches

  16. Topographic and hydraulic controls over alluviation on a bedrock template

    Science.gov (United States)

    Milan, David; Heritage, George; Entwistle, Neil; Tooth, Stephen

    2017-04-01

    Bedrock-alluvial anastomosed channels found in dryland rivers are characterised by an over-wide channel cut into the host rock containing a network of interconnecting bedrock sub-channels separated by bedrock influenced interfluve areas. Whilst the channels remain largely free of sediment the interfluves display varying levels of alluviation ranging from bare rock, sand sheets and silt drapes through to consolidated bedrock core bars, islands and lateral deposits. Examination of the sedimentary units associated with the bedrock anastomosed reaches of the Sabie river in the Kruger National Park, South Africa reveal a repeating sequence of coarse sand / fine gravel grading through to silt representing successive flood related depositional units. Unit development in relation to the bedrock template was investigated using pre-flood aerial imagery of bedrock core bar locations and post flood LiDAR data of bedrock anastomosed sites stripped during the 2000 and 2012 extreme flood events. This revealed a propensity for bar development associated with bedrock hollows disconnected from the principal high-energy sub-channels. 2-D morpho-dynamic modelling was used to further investigate spatial patterns of deposition over the bedrock template. Although topographic lows displayed mid-range velocities during peak flow events, these are likely to be preferential routing areas, with sediments stalling in low energy areas on the falling limb of floods. It is also likely that vegetation development plays a fundamental role in the development of alluviated zones, through increasing strength of alluvial units and capturing new sediments. With these results in mind we present a conceptual model for the development of bedrock-core bars, the fundamental unit in bedrock-alluvial anastomosed channels.

  17. Nanomanufacturing of titania interfaces with controlled structural and functional properties by supersonic cluster beam deposition

    Science.gov (United States)

    Podestà, Alessandro; Borghi, Francesca; Indrieri, Marco; Bovio, Simone; Piazzoni, Claudio; Milani, Paolo

    2015-12-01

    Great emphasis is placed on the development of integrated approaches for the synthesis and the characterization of ad hoc nanostructured platforms, to be used as templates with controlled morphology and chemical properties for the investigation of specific phenomena of great relevance in interdisciplinary fields such as biotechnology, medicine, and advanced materials. Here, we discuss the crucial role and the advantages of thin film deposition strategies based on cluster-assembling from supersonic cluster beams. We select cluster-assembled nanostructured titania (ns-TiO2) as a case study to demonstrate that accurate control over morphological parameters can be routinely achieved, and consequently, over several relevant interfacial properties and phenomena, like surface charging in a liquid electrolyte, and proteins and nanoparticles adsorption. In particular, we show that the very good control of nanoscale morphology is obtained by taking advantage of simple scaling laws governing the ballistic deposition regime of low-energy, mass-dispersed clusters with reduced surface mobility.

  18. Template-directed synthesis using the heterogeneous templates produced by montmorillonite catalysis. A possible bridge between the prebiotic and RNA worlds

    Science.gov (United States)

    Ertem, G.; Ferris, J. P.

    1997-01-01

    The synthesis of oligoguanylates [oligo(G)s] is catalyzed by a template of oligocytidylates [oligo(C)s] containing 2',5'- and 3',5'-linked phosphodiester bonds with and without incorporated C5'ppC groupings. An oligo(C) template containing exclusively 2',5'-phosphodiester bonds also serves as a template for the synthesis of complementary oligo(G)s. The oligo(C) template was prepared by the condensation of the 5'-phosphorimidazolide of cytidine on montmorillonite clay. These studies establish that RNA oligomers prepared by mineral catalysis, or other routes on the primitive earth, did not have to be exclusively 3',5'-linked to catalyze template-directed synthesis, since oligo(C)s containing a variety of linkage isomers serve as templates for the formation of complementary oligo(G)s. These findings support the postulate that origin of the RNA world was initiated by the RNA oligomers produced by polymerization of activated monomers formed by prebiotic processes.

  19. Hollow colloidal particles by emulsion templating, from synthesis to self-assembly

    NARCIS (Netherlands)

    Zoldesi, C.I.

    2006-01-01

    This research was focused on developing a new method to prepare hollow colloidal particles in the micrometer range, based on emulsion templating, characterization of both the templates and the resulting particles from physical and chemical viewpoint, and fabrication of materials based on such

  20. Performance evaluation of fusing protected fingerprint minutiae templates on the decision level

    NARCIS (Netherlands)

    Yang, B.; Groot, K.T.J. de; Christoph Busch; Veldhuis, R.N.J.; Xu, H.

    2013-01-01

    In a biometric authentication system using protected templates, a pseudonymous identifier is the part of a protected template that can be directly compared. Each compared pair of pseudonymous identifiersresults in a decision testing whether both identifiers are derived from the same biometric