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Sample records for susceptibility assay mods

  1. Diagnostic accuracy of microscopic Observation Drug Susceptibility (MODS assay for pediatric tuberculosis in Hanoi, Vietnam.

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    Sinh Thi Tran

    Full Text Available Microscopic [corrected] Observation Drug Susceptibility (MODS has been shown to be an effective and rapid technique for early diagnosis of tuberculosis (TB. Thus far only a limited number of studies evaluating MODS have been performed in children and in extra-pulmonary tuberculosis. This study aims to assess relative accuracy and time to positive culture of MODS for TB diagnosis in children admitted to a general pediatric hospital in Vietnam.Specimens from children with suspected TB were tested by smear, MODS and Lowenstein-Jensen agar (LJ. 1129 samples from 705 children were analyzed, including sputum (n=59, gastric aspirate (n=775, CSF (n=148, pleural fluid (n=33, BAL (n=41, tracheal fluid (n=45, other (n=28. 113 TB cases were defined based on the "clinical diagnosis" (confirmed and probable groups as the reference standard, in which 26% (n=30 were diagnosed as extra-pulmonary TB. Analysis by patient shows that the overall sensitivity and specificity of smear, LJ and MODS against "clinical diagnosis" was 8.8% and 100%, 38.9% and 100%, 46% and 99.5% respectively with MODS significantly more sensitive than LJ culture (P=0.02. When analyzed by sample type, the sensitivity of MODS was significantly higher than LJ for gastric aspirates (P=0.004. The time to detection was also significantly shorter for MODS than LJ (7 days versus 32 days, P<0.001.MODS [corrected] is a sensitive and rapid culture technique for detecting TB in children. As MODS culture can be performed at a BSL2 facility and is inexpensive, it can therefore be recommended as a routine test for children with symptoms suggestive of TB in resource-limited settings.

  2. Diagnostic accuracy of microscopic Observation Drug Susceptibility (MODS) assay for pediatric tuberculosis in Hanoi, Vietnam.

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    Tran, Sinh Thi; Renschler, John Patrick; Le, Hai Thanh; Dang, Hang Thi Thu; Dao, Tuan Minh; Pham, An Nhat; Nguyen, Liem Thanh; Van Nguyen, Hung; Thi Thu Nguyen, Thuy; Ngoc Le, Sy; Fox, Annette; Caws, Maxine; Thi Quynh Nguyen, Nhu; Thi Quynh, Nhudo; Horby, Peter; Wertheim, Heiman

    2013-01-01

    Microscopic [corrected] Observation Drug Susceptibility (MODS) has been shown to be an effective and rapid technique for early diagnosis of tuberculosis (TB). Thus far only a limited number of studies evaluating MODS have been performed in children and in extra-pulmonary tuberculosis. This study aims to assess relative accuracy and time to positive culture of MODS for TB diagnosis in children admitted to a general pediatric hospital in Vietnam. Specimens from children with suspected TB were tested by smear, MODS and Lowenstein-Jensen agar (LJ). 1129 samples from 705 children were analyzed, including sputum (n=59), gastric aspirate (n=775), CSF (n=148), pleural fluid (n=33), BAL (n=41), tracheal fluid (n=45), other (n=28). 113 TB cases were defined based on the "clinical diagnosis" (confirmed and probable groups) as the reference standard, in which 26% (n=30) were diagnosed as extra-pulmonary TB. Analysis by patient shows that the overall sensitivity and specificity of smear, LJ and MODS against "clinical diagnosis" was 8.8% and 100%, 38.9% and 100%, 46% and 99.5% respectively with MODS significantly more sensitive than LJ culture (P=0.02). When analyzed by sample type, the sensitivity of MODS was significantly higher than LJ for gastric aspirates (P=0.004). The time to detection was also significantly shorter for MODS than LJ (7 days versus 32 days, Pculture technique for detecting TB in children. As MODS culture can be performed at a BSL2 facility and is inexpensive, it can therefore be recommended as a routine test for children with symptoms suggestive of TB in resource-limited settings.

  3. Reliability of the MODS assay decentralisation process in three health regions in Peru

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    Mendoza, A.; Castillo, E.; Gamarra, N.; Huamán, T.; Perea, M.; Monroi, Y.; Salazar, R.; Coronel, J.; Acurio, M.; Obregón, G.; Roper, M.; Bonilla, C.; Asencios, L.; Moore, D. A. J.

    2011-01-01

    OBJECTIVE To deliver rapid isoniazid (INH) and rifampicin (RMP) drug susceptibility testing (DST) close to the patient, we designed a decentralisation process for the microscopic observation drug susceptibility (MODS) assay in Peru and evaluated its reliability. METHODS After 2 weeks of training, laboratory staff processed ≥120 consecutive sputum samples each in three regional laboratories. Samples were processed in parallel with MODS testing at an expert laboratory. Blinded paired results were independently analysed by the Instituto Nacional de Salud (INS) according to predetermined criteria: concordance for culture, DST against INH and RMP and diagnosis of multidrug-resistant t uberculosis (MDR-TB) ≥ 95%, McNemar's P > 0.05, kappa index (κ) ≥ 0.75 and contamination 1–4%. Sensitivity and specificity for MDR-TB were calculated. RESULTS The accreditation process for Callao (126 samples, 79.4% smear-positive), Lima Sur (n = 130, 84%) and Arequipa (n = 126, 80%) took respectively 94, 97 and 173 days. Pre-determined criteria in all regional laboratories were above expected values. The sensitivity and specificity for detecting MDR-TB in regional laboratories were >95%, except for sensitivity in Lima Sur, which was 91.7%. Contamination was 1.0–2.3%. Mean delay to positive MODS results was 9.9–12.9 days. CONCLUSION Technology transfer of MODS was reliable, effective and fast, enabling the INS to accredit regional laboratories swiftly. PMID:21219684

  4. Evaluating the Auto-MODS Assay, a Novel Tool for Tuberculosis Diagnosis for Use in Resource-Limited Settings

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    Wang, Linwei; Mohammad, Sohaib H.; Li, Qiaozhi; Rienthong, Somsak; Rienthong, Dhanida; Nedsuwan, Supalert; Mahasirimongkol, Surakameth; Yasui, Yutaka

    2014-01-01

    There is an urgent need for simple, rapid, and affordable diagnostic tests for tuberculosis (TB) to combat the great burden of the disease in developing countries. The microscopic observation drug susceptibility assay (MODS) is a promising tool to fill this need, but it is not widely used due to concerns regarding its biosafety and efficiency. This study evaluated the automated MODS (Auto-MODS), which operates on principles similar to those of MODS but with several key modifications, making it an appealing alternative to MODS in resource-limited settings. In the operational setting of Chiang Rai, Thailand, we compared the performance of Auto-MODS with the gold standard liquid culture method in Thailand, mycobacterial growth indicator tube (MGIT) 960 plus the SD Bioline TB Ag MPT64 test, in terms of accuracy and efficiency in differentiating TB and non-TB samples as well as distinguishing TB and multidrug-resistant (MDR) TB samples. Sputum samples from clinically diagnosed TB and non-TB subjects across 17 hospitals in Chiang Rai were consecutively collected from May 2011 to September 2012. A total of 360 samples were available for evaluation, of which 221 (61.4%) were positive and 139 (38.6%) were negative for mycobacterial cultures according to MGIT 960. Of the 221 true-positive samples, Auto-MODS identified 212 as positive and 9 as negative (sensitivity, 95.9%; 95% confidence interval [CI], 92.4% to 98.1%). Of the 139 true-negative samples, Auto-MODS identified 135 as negative and 4 as positive (specificity, 97.1%; 95% CI, 92.8% to 99.2%). The median time to culture positivity was 10 days, with an interquartile range of 8 to 13 days for Auto-MODS. Auto-MODS is an effective and cost-sensitive alternative diagnostic tool for TB diagnosis in resource-limited settings. PMID:25378569

  5. Prospective evaluation of simply modified MODS assay: an effective tool for TB diagnosis and detection of MDR-TB

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    Chaiyasirinroje B

    2012-05-01

    Full Text Available Boonchai Chaiyasirinroje1,*, Myo Nyein Aung2,3,*, Saiyud Moolphate1,4, Yuthichai Kasetjaroen5, Somsak Rienthong5, Dhanida Rienthong5, Oranuch Nampaisan1, Supalert Nedsuwan6, Wiravoot Sangchun6, Narin Suriyon7, Satoshi Mitarai4, Norio Yamada41TB/HIV Research Project, RIT, Chiang Rai, Thailand; 2Department of Public Health, Graduate School of Medicine, Juntendo University, Tokyo, Japan; 3Boromrajonani College of Nursing Nakhon Lampang (BCNLP, Lampang, Thailand; 4Research Institute of Tuberculosis (RIT, Tokyo, Japan; 5Bureau of Tuberculosis, Bangkok, Thailand; 6Chiang Rai Regional Hospital, Chiang Rai, Thailand; 7Chiang Rai Provincial Health Office, Chiang Rai, Thailand *These authors contributed equally to this workBackground and setting: Thailand is one of the highest tuberculosis (TB-burdened countries. Chiang Rai, the northernmost province of Thailand has high tuberculosis and human immunodeficiency virus (HIV prevalence and the laboratory workload for TB culture and drug susceptibility testing is increasing.Objectives: To evaluate the simply modified microscopic-observation drug-susceptibility assay (MODS in the setting of a developing country.Methods: In this cross-sectional diagnostic study, a total of 202 sputum samples of clinically diagnosed TB patients were used to test the performance of MODS assay in reference to gold standard BACTEC™ MGIT™ 960 liquid culture system and Ogawa solid culture. Sputum samples were collected from clinically diagnosed TB patients. Culture growth rate and time to culture positivity were compared among three methods. Performance of modified MODS assay was evaluated for detection of mycobacterium drug resistance in reference to MGIT antimicrobial susceptibility test (AST.Result: Median time to culture positivity by MODS, solid, and liquid culture were 12, 30, and 6 days respectively. Compared to the drug susceptibility test (DST result of reference liquid culture, the sensitivity and specificity of MODS for

  6. Microscopic Observation Drug Susceptibility Assay for Rapid Diagnosis of Lymph Node Tuberculosis and Detection of Drug Resistance.

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    Kirwan, Daniela E; Ugarte-Gil, Cesar; Gilman, Robert H; Caviedes, Luz; Rizvi, Hasan; Ticona, Eduardo; Chavez, Gonzalo; Cabrera, José Luis; Matos, Eduardo D; Evans, Carlton A; Moore, David A J; Friedland, Jon S

    2016-01-01

    In this study, 132 patients with lymphadenopathy were investigated. Fifty-two (39.4%) were diagnosed with tuberculosis (TB). The microscopic observation drug susceptibility (MODS) assay provided rapid (13 days), accurate diagnosis (sensitivity, 65.4%) and reliable drug susceptibility testing (DST). Despite its lower sensitivity than that of other methods, its faster results and simultaneous DST are advantageous in resource-poor settings, supporting the incorporation of MODS into diagnostic algorithms for extrapulmonary TB. Copyright © 2015 Kirwan et al.

  7. Kesesuaian antara Metode Microscopic Observation Drug Susceptibility Assay dan Ogawa pada Biakan Mycobacterium tuberculosis

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    Ni Sayu Dewi B; Ida Parwati; Bachti Alisjahbana; Dewi Kartika Turbawaty

    2011-01-01

    Tuberculosis (TB) is a problem of public health that causing high morbidity and mortality rates in various countries in the world. The diagnosis of pulmonary tuberculosis in adults can be established based on the discovery of M. tuberculosis on smear or culture of sputum. Culture is the gold standard but the availlable method is time consuming, it is need minimal eight weeks. Microscopic observation drug susceptibility assay (MODS) is one of methods for M. tuberculosis culture using liquid me...

  8. Kesesuaian antara Metode Microscopic Observation Drug Susceptibility Assay dan Ogawa pada Biakan Mycobacterium tuberculosis

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    Ni Sayu Dewi B

    2011-06-01

    Full Text Available Tuberculosis (TB is a problem of public health that causing high morbidity and mortality rates in various countries in the world. The diagnosis of pulmonary tuberculosis in adults can be established based on the discovery of M. tuberculosis on smear or culture of sputum. Culture is the gold standard but the availlable method is time consuming, it is need minimal eight weeks. Microscopic observation drug susceptibility assay (MODS is one of methods for M. tuberculosis culture using liquid medium that can be a simultaneously test for M. tuberculosis drug sensitivity. The purpose of this study was to determine the conformity of the MODS method compared with Ogawa method for cultivation of M. tuberculosis in pulmonary TB patients. The cross sectional research has been conducted at Clinical Pathology Department of Dr. Hasan Sadikin Hospital, Bandung and examination of the specimen done at Health Laboratory Development Unit (BPLK, West Java Province between April to August 2010. The subjects were patients who diagnosed as pulmonary TB suspect. Each collected specimen was cultured in liquid media MODS and solid media Ogawa. To analyze the conformity of MODS and Ogawa method, Kappa coefficient of agreement was used. There were 172 specimens collected from 133 subjects. The conformity between culture results of M. tuberculosis in MODS method and in Ogawa’s method using Kappa coefficient, was high (Kappa index 0.91. The difference of growth time of M. tuberculosis significant (p=0.000, in MODS was 10.1 days (range 4–21 days and in Ogawa method was 24.8 days (range 14–35 days. Conclusion, MODS and Ogawa’s method have the relatively similar diagnostic success rate, the advantage of MODS method is, the growth of M. tuberculosis is faster than in Ogawa method.

  9. The value of microscopic-observation drug susceptibility assay in the diagnosis of tuberculosis and detection of multidrug resistance.

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    Sertel Şelale, Denİz; Uzun, Meltem

    2018-01-01

    Inexpensive, rapid, and reliable tests for detecting the presence and drug susceptibility of Mycobacterium tuberculosis complex (MTBC) are urgently needed to control the transmission of tuberculosis. In this study, we aimed to assess the accuracy and speed of the microscopic-observation drug susceptibility (MODS) assay in the identification of MTBC and detection of multidrug resistance. Sputum samples from patients suspected to have tuberculosis were simultaneously tested with MODS and conventional culture [Löwenstein-Jensen (LJ) culture, BACTEC MGIT™ 960 (MGIT) system], and drug susceptibility testing (MGIT system) methods. A total of 331 sputum samples were analyzed. Sensitivity and specificity of MODS assay for detection of MTBC strains were 96% and 98.8%, respectively. MODS assay detected multidrug resistant MTBC isolates with 92.3% sensitivity and 96.6% specificity. Median time to culture positivity was similar for MGIT (8 days) and MODS culture (8 days), but was significantly longer with LJ culture (20 days) (p tuberculosis and detection of multidrug resistance. © 2017 APMIS. Published by John Wiley & Sons Ltd.

  10. Direct nitrate reductase assay versus microscopic observation drug susceptibility test for rapid detection of MDR-TB in Uganda.

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    Freddie Bwanga

    Full Text Available The most common method for detection of drug resistant (DR TB in resource-limited settings (RLSs is indirect susceptibility testing on Lowenstein-Jensen medium (LJ which is very time consuming with results available only after 2-3 months. Effective therapy of DR TB is therefore markedly delayed and patients can transmit resistant strains. Rapid and accurate tests suitable for RLSs in the diagnosis of DR TB are thus highly needed. In this study we compared two direct techniques--Nitrate Reductase Assay (NRA and Microscopic Observation Drug Susceptibility (MODS for rapid detection of MDR-TB in a high burden RLS. The sensitivity, specificity, and proportion of interpretable results were studied. Smear positive sputum was collected from 245 consecutive re-treatment TB patients attending a TB clinic in Kampala, Uganda. Samples were processed at the national reference laboratory and tested for susceptibility to rifampicin and isoniazid with direct NRA, direct MODS and the indirect LJ proportion method as reference. A total of 229 specimens were confirmed as M. tuberculosis, of these interpretable results were obtained in 217 (95% with either the NRA or MODS. Sensitivity, specificity and kappa agreement for MDR-TB diagnosis was 97%, 98% and 0.93 with the NRA; and 87%, 95% and 0.78 with the MODS, respectively. The median time to results was 10, 7 and 64 days with NRA, MODS and the reference technique, respectively. The cost of laboratory supplies per sample was low, around 5 USD, for the rapid tests. The direct NRA and MODS offered rapid detection of resistance almost eight weeks earlier than with the reference method. In the study settings, the direct NRA was highly sensitive and specific. We consider it to have a strong potential for timely detection of MDR-TB in RLS.

  11. Evaluation of microscopic observation drug susceptibility assay for diagnosis of multidrug-resistant tuberculosis in Viet Nam.

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    Dang, Thi Minh Ha; Nguyen, Thi Ngoc Lan; Wolbers, Marcel; Vo, Sy Kiet; Hoang, Thi Thanh Hang; Nguyen, Hong Duc; To, My Huong; Vuong, Minh Bach; Nguyen, Thi Phuong Thao; Tran, Van Quyet; Nguyen, Thi Bich Tuyen; Vo, Thi Ha; Nguyen, Thi Nho; Dai, Viet Hoa; Phan, Thi Hoang Anh; Nguyen, Huy Dung; Farrar, Jeremy; Caws, Maxine

    2012-03-01

    Early diagnosis of tuberculosis (TB) and multidrug resistant tuberculosis (MDR TB) is important for the elimination of TB. We evaluated the microscopic observation drug susceptibility (MODS) assay as a direct rapid drug susceptibility testing (DST) method for MDR-TB screening in sputum samples All adult TB suspects, who were newly presenting to Pham Ngoc Thach Hospital from August to November 2008 were enrolled into the study. Processed sputum samples were used for DST by MODS (DST-MODS) (Rifampicin (RIF) 1 μg/ml and Isoniazid (INH) 0.4 μg/ml), MGIT culture (Mycobacterial Growth Indicator Tube) and Lowenstein Jensen (LJ) culture. Cultures positive by either MGIT or LJ were used for proportional DST (DST-LJ) (RIF 40 μg/ml and INH 0.2 μg/ml). DST profiles on MODS and LJ were compared. Discrepant results were resolved by multiplex allele specific PCR (MAS-PCR). Seven hundred and nine TB suspects/samples were enrolled into the study, of which 300 samples with DST profiles available from both MODS and DST-LJ were analyzed. Cording in MODS was unable to correctly identify 3 Mycobacteria Other Than Tuberculosis (MOTT) isolates, resulting in 3 false positive TB diagnoses. None of these isolates were identified as MDR-TB by MODS. The sensitivity and specificity of MODS were 72.6% (95%CI: 59.8, 83.1) and 97.9% (95%CI: 95.2, 99.3), respectively for detection of INH resistant isolates, 72.7% (95%CI: 30.9, 93.7) and 99.7% (95%CI: 98.1, 99.9), respectively for detecting RIF resistant isolates and 77.8% (95%CI: 39.9, 97.1) and 99.7% (95%CI: 98.1, 99.9), respectively for detecting MDR isolates. The positive and negative predictive values (PPV and NPV) of DST-MODS were 87.5% (95%CI: 47.3, 99.6) and 99.3% (95%CI: 97.5, 99.9) for detection of MDR isolates; and the agreement between MODS and DST-LJ was 99.0% (kappa: 0.8, P drug resistance detection was probably due to low bacterial load samples and the high INH concentration (0.4 μg/ml). The low PPV of DST-MODS may be due to the

  12. A rapid and low-cost microscopic observation drug susceptibility assay for detecting TB and MDR-TB among individuals infected by HIV in South India

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    S Solomon

    2013-01-01

    Full Text Available Background: The converging epidemics of HIV and tuberculosis (TB pose one of the greatest public health challenges of our time. Rapid diagnosis of TB is essential in view of its infectious nature, high burden of cases, and emergence of drug resistance. Objective: The purpose of this present study was to evaluate the feasibility of implementing the microscopic observation drug susceptibility (MODS assay, a novel assay for the diagnosis of TB and multi-drug-resistant tuberculosis (MDR-TB directly from sputum specimens, in the Indian setting. Materials and Methods: This study involved a cross-sectional, blinded assessment of the MODS assay on 1036 suspected cases of pulmonary TB in HIV-positive and HIV-negative patients against the radiometric method, BD-BACTEC TB 460 system. Results: Overall, the sensitivity, specificity, positive predictive value, and negative predictive value of the MODS assay in detecting MTB among TB suspected patients were 89.1%, 99.1%, 94.2%, 95.8%, respectively. In addition, in the diagnosis of drug-resistant TB, the MODS assay was 84.2% sensitive for those specimens reporting MDR, 87% sensitivity for those specimens reporting INH mono-resistance, and 100% sensitive for specimens reporting RIF mono-resistance. The median time to detection of TB in the MODS assay versus BACTEC was 9 versus 21 days (P < 0.001. Conclusion: Costing 5 to 10 times lesser than the automated culture methods, the MODS assay has the potential clinical utility as a simple and rapid method. It could be effectively used as an alternative method for diagnosing TB and detection of MDR-TB in a timely and affordable way in resource-limited settings.

  13. Evaluation of Microscopic Observation Drug Susceptibility (MODS) and the string test for rapid diagnosis of pulmonary tuberculosis in HIV/AIDS patients in Bolivia.

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    Lora, Meredith H; Reimer-McAtee, Melissa J; Gilman, Robert H; Lozano, Daniel; Saravia, Ruth; Pajuelo, Monica; Bern, Caryn; Castro, Rosario; Espinoza, Magaly; Vallejo, Maya; Solano, Marco; Challapa, Roxana; Torrico, Faustino

    2015-06-06

    Tuberculosis (TB) is the most common opportunistic infection and the leading cause of death in HIV-positive people worldwide. Diagnosing TB is difficult, and is more challenging in resource-scarce settings where culture-based diagnostic methods rely on poorly sensitive smear microscopy by Ziehl-Neelsen stain (ZN). We performed a cross-sectional study examining the diagnostic utility of Microscopic Observation Drug Susceptibility liquid culture (MODS) versus traditional Ziehl-Neelsen staining (ZN) and Lowenstein Jensen culture (LJ) of pulmonary tuberculosis (TB) and multidrug-resistant tuberculosis (MDRTB) in HIV-infected patients in Bolivia. For sputum scarce individuals we assessed the value of the string test and induced sputum for TB diagnosis. The presence of Mycobacterium tuberculosis (Mtb) in the sputum of 107 HIV-positive patients was evaluated by ZN, LJ, and MODS. Gastric secretion samples obtained by the string test were evaluated by MODS in 102 patients. The TB-HIV co-infection rate of HIV patients with respiratory symptoms by sputum sample was 45 % (48/107); 46/48 (96 %) were positive by MODS, 38/48 (79 %) by LJ, and 30/48 (63 %) by ZN. The rate of MDRTB was 9 % (4/48). Median time to positive culture was 10 days by MODS versus 34 days by LJ (p Bolivia.

  14. Microscopic observation drug-susceptibility assay vs. Xpert® MTB/RIF for the diagnosis of tuberculosis in a rural African setting: a cost-utility analysis.

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    Wikman-Jorgensen, Philip E; Llenas-García, Jara; Pérez-Porcuna, Tomàs M; Hobbins, Michael; Ehmer, Jochen; Mussa, Manuel A; Ascaso, Carlos

    2017-06-01

    To compare the cost-utility of microscopic observation drug-susceptibility assay (MODS) and Xpert ® MTB/RIF implementation for tuberculosis (TB) diagnosis in rural northern Mozambique. Stochastic transmission compartmental TB model from the healthcare provider perspective with parameter input from direct measurements, systematic literature reviews and expert opinion. MODS and Xpert ® MTB/RIF were evaluated as replacement test of smear microscopy (SM) or as an add-on test after a negative SM. Costs were calculated in 2013 USD, effects in disability-adjusted life years (DALY). Willingness to pay threshold (WPT) was established at once the per capita Gross National Income of Mozambique. MODS as an add-on test to negative SM produced an incremental cost-effectiveness ratio (ICER) of 5647.89USD/DALY averted. MODS as a substitute for SM yielded an ICER of 5374.58USD/DALY averted. Xpert ® MTB/RIF as an add-on test to negative SM yielded ICER of 345.71USD/DALY averted. Xpert ® MTB/RIF as a substitute for SM obtained an ICER of 122.13USD/DALY averted. TB prevalence and risk of infection were the main factors impacting MODS and Xpert ® MTB/RIF ICER in the one-way sensitivity analysis. In the probabilistic sensitivity analysis, Xpert ® MTB/RIF was most likely to have an ICER below the WPT, whereas MODS was not. Our cost-utility analysis favours the implementation of Xpert ® MTB/RIF as a replacement of SM for all TB suspects in this rural high TB/HIV prevalence African setting. © 2017 John Wiley & Sons Ltd.

  15. Relative performance of antimicrobial susceptibility assays on clinical Escherichia coli isolates from animals.

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    Badger, Skye; Abraham, Sam; Saputra, Sugiyono; Trott, Darren J; Turnidge, John; Mitchell, Tahlia; Caraguel, Charles G B; Jordan, David

    2018-02-01

    The assessment of antimicrobial resistance in bacteria derived from animals is often performed using the disc diffusion assay. However broth-microdilution is the preferred assay for national antimicrobial resistance surveillance programs. This study aimed to evaluate the accuracy of disc diffusion relative to broth-microdilution across a panel of 12 antimicrobials using data from a collection of 994 clinical Escherichia coli isolates from animals. Disc diffusion performance was evaluated by diagnostic sensitivity, specificity, likelihood ratio pairs and receive-operating characteristic (ROC) analysis. Data was dichotomised using CLSI susceptible and resistant clinical breakpoints. In addition, disc diffusion breakpoints produced using diffusion Breakpoint Estimation Testing Software (dBETS) were evaluated. Analysis revealed considerable variability in performance estimates for disc diffusion susceptible and resistant breakpoints (AUC ranges: 0.78-0.99 and 0.92-1.0, respectively) across the panel of antimicrobials. Ciprofloxacin, tetracycline, and ampicillin estimates were robust across both breakpoints, whereas estimates for several antimicrobials including amoxicillin-clavulanic acid, cefoxitin and gentamicin were less favourable using susceptible breakpoints. Overall performance estimates were moderately improved when dBETS susceptible breakpoints were applied. For most antimicrobials, disc diffusion was accurate at predicting resistance of clinical E. coli from animals that could otherwise be determined by broth-microdilution. While disc diffusion is suboptimal for assessing the proportion of fully susceptible isolates for some drugs, sensitivity and specificity estimates provided here allow for the use of standard formula to correct this. For this reason, disc diffusion has applicability in national surveillance provided the performance of the assay is taken into account. Copyright © 2017 Elsevier B.V. All rights reserved.

  16. Rapid susceptibility testing of Mycobacterium tuberculosis by bioluminescence assay of mycobacterial ATP

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    Nilsson, L.E.; Hoffner, S.E.; Ansehn, S.

    1988-01-01

    Mycobacterial growth was monitored by bioluminescence assay of mycobacterial ATP. Cultures of Mycobacterium tuberculosis H37Rv and of 25 clinical isolates of the same species were exposed to serial dilutions of ethambutol, isoniazid, rifampin, and streptomycin. A suppression of ATP, indicating growth inhibition, occurred for susceptible but not resistant strains within 5 to 7 days of incubation. Breakpoint concentrations between susceptibility and resistance were determined by comparing these results with those obtained by reference techniques. Full agreement was found in 99% of the assays with the resistance ratio method on Lowenstein-Jensen medium, and 98% of the assays were in full agreement with the radiometric system (BACTEC). A main advantage of the bioluminescence method is its rapidity, with results available as fast as with the radiometric system but at a lower cost and without the need for radioactive culture medium. The method provides kinetic data concerning drug effects within available in vivo drug concentrations and has great potential for both rapid routine susceptibility testing and research applications in studies of drug effects on mycobacteria

  17. Physician-initiated courtesy MODS testing for TB and MDR-TB diagnosis and patient management.

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    Nic Fhogartaigh, C J; Vargas-Prada, S; Huancaré, V; Lopez, S; Rodríguez, J; Moore, D A J

    2008-05-01

    Laboratorio de Investigación de Enfermedades Infecciosas, Universidad Peruana Cayetano Heredia (UPCH) and government health centres, Lima, Peru. To evaluate the contribution of unselected (courtesy) microscopic observation drug susceptibility (MODS) testing to the diagnosis and/or drug susceptibility testing (DST) of tuberculosis and their subsequent impact upon patient management. Retrospective database analysis and case note review of MODS culture-positive cases. Mycobacterium tuberculosis was isolated in 28.9% of 225 samples (209 patients); 22.2% of 63 positive cases were multidrug-resistant. In 58 MODS culture-positive cases with follow-up data available, MODS provided culture confirmation of diagnosis, DST or both in 82.8%, before any standard method. In 41.4%, this result should have prompted a modification in patient management. Delays between laboratory result and initiation or change of treatment, where applicable, took on average 42 and 64 days, respectively, of which a delay of respectively 17 and 48 days occurred after the receipt of results by the health facility. MODS provides important data for clinical management within a meaningful timeframe and should contribute positively to patient outcomes due to earlier initiation of appropriate therapy. Although clinicians may successfully select patients likely to benefit from MODS, ongoing work is required to identify optimal implementation of the assay and to reduce logistical and health system derived delays.

  18. Evaluation of a semi-automated reporter phage assay for susceptibility testing of Mycobacterium tuberculosis isolates in South Africa.

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    Banaiee, Niaz; January, Vanessa; Barthus, Charmaine; Lambrick, Maureen; Roditi, Denise; Behr, Marcel A; Jacobs, William R; Steyn, Lafras M

    2008-01-01

    In a prospective study conducted by laboratory technologists in a diagnostic laboratory in Cape Town, South Africa, a semi-automated phage-based antibiotic susceptibility assay was implemented and the performance of the luciferase reporter mycobacteriophage (LRP) system for susceptibility testing of clinical Mycobacterium tuberculosis complex (MTC) isolates against rifampin and isoniazid was evaluated. Two hundred consecutive clinical MGIT cultures of MTC species were included in this study. Antibiotic susceptibility assays were set up manually for the LRP and BACTEC radiometric systems (BACTEC) and read in a plate luminometer and the BACTEC 460 instrument, respectively. Discrepant susceptibility results were resolved by the conventional agar proportion method. Of the 200 secondary cultures prepared for this study, 9 (4.5%) were lost to contamination (LRP 4, BACTEC 1, both 4). All of the remaining 191 cultures underwent susceptibility testing by both methods and the overall agreement between the LRP and BACTEC was 98.4% (rifampin 100%; isoniazid 96.9%). Of the 6 discrepant cultures tested by the agar proportion method, 2 gave results in agreement with the LRP. The sensitivity of the LRP for detection of drug-resistant isolates was 100% for both rifampin (n=9) and isoniazid (n=12). The median turnaround time for susceptibility testing was 2 days with the LRP and 9 days with BACTEC. In conclusion, the semi-automated LRP-based assay offers a rapid and practical approach for accurate susceptibility testing of M. tuberculosis cultures in diagnostic laboratories with limited financial resources, but with competent technologists.

  19. Identification of Bacillus thuringiensis Cry1AbMod binding-proteins from Spodoptera frugiperda.

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    Martínez de Castro, Diana L; García-Gómez, Blanca I; Gómez, Isabel; Bravo, Alejandra; Soberón, Mario

    2017-12-01

    Bacillus thuringiensis Cry toxins are currently used for pest control in transgenic crops but evolution of resistance by the insect pests threatens the use of this technology. The Cry1AbMod toxin was engineered to lack the alpha helix-1 of the parental Cry1Ab toxin and was shown to counter resistance to Cry1Ab and Cry1Ac toxins in different insect species including the fall armyworm Spodoptera frugiperda. In addition, Cry1AbMod showed enhanced toxicity to Cry1Ab-susceptible S. frugiperda populations. To gain insights into the mechanisms of this Cry1AbMod-enhanced toxicity, we isolated the Cry1AbMod toxin binding proteins from S. frugiperda brush border membrane vesicles (BBMV), which were identified by pull-down assay and liquid chromatography-tandem mass spectrometry (LC-MS/MS). The LC-MS/MS results indicated that Cry1AbMod toxin could bind to four classes of aminopeptidase (N1, N3, N4 y N5) and actin, with the highest amino acid sequence coverage acquired for APN 1 and APN4. In addition to these proteins, we found other proteins not previously described as Cry toxin binding proteins. This is the first report that suggests the interaction between Cry1AbMod and APN in S. frugiperda. Copyright © 2017 Elsevier Inc. All rights reserved.

  20. A field evaluation of the Hardy TB MODS Kit™ for the rapid phenotypic diagnosis of tuberculosis and multi-drug resistant tuberculosis.

    Directory of Open Access Journals (Sweden)

    Laura Martin

    Full Text Available Even though the WHO-endorsed, non-commercial MODS assay offers rapid, reliable TB liquid culture and phenotypic drug susceptibility testing (DST at lower cost than any other diagnostic, uptake has been patchy. In part this reflects misperceptions about in-house assay quality assurance, but user convenience of one-stop procurement is also important. A commercial MODS kit was developed by Hardy Diagnostics (Santa Maria, CA, USA with PATH (Seattle, WA, USA to facilitate procurement, simplify procedures through readymade media, and enhance safety with a sealing silicone plate lid. Here we report the results from a large-scale field evaluation of the MODS kit in a government service laboratory.2446 sputum samples were cultured in parallel in Lowenstein-Jensen (LJ, conventional MODS and in the MODS kit. MODS kit DST was compared with conventional MODS (direct DST and proportion method (indirect DST. 778 samples (31.8% were Mycobacterium tuberculosis culture-positive. Compared to conventional MODS the sensitivity, specificity, positive, and negative predictive values (95% confidence intervals of the MODS Kit were 99.3% (98.3-99.8%, 98.3% (97.5-98.8%, 95.8% (94.0-97.1%, and 99.7% (99.3-99.9%. Median (interquartile ranges time to culture-positivity (and rifampicin and isoniazid DST was 10 (9-13 days for conventional MODS and 8.5 (7-11 for MODS Kit (p<0.01. Direct rifampicin and isoniazid DST in MODS kit was almost universally concordant with conventional MODS (97.9% agreement, 665/679 evaluable samples and reference indirect DST (97.9% agreement, 687/702 evaluable samples.MODS kit delivers performance indistinguishable from conventional MODS and offers a convenient, affordable alternative with enhanced safety from the sealing silicone lid. The availability in the marketplace of this platform, which conforms to European standards (CE-marked, readily repurposed for second-line DST in the near future, provides a fresh opportunity for improving equity of

  1. In planta assay of hygromycin susceptibility and mutant screening in rice at heading stage

    International Nuclear Information System (INIS)

    Fu Haowei; Li Youfa; Ma Xinghua; Shen Shengquan; Shu Xiaoli; Shu Qingyao; Chen Yang

    2012-01-01

    Cells and tissue of plants carrying the hygromycin phosphotransferase gene (HPT) are tolerant to antibiotic hygromycin and hence become the common selection gene for genetic transformation of crop plants, particularly monocots. The present study aimed at establishing a rapid method for in planta screening of hygromycin tolerant plants in transgenic breeding. At heading stage transgenic and conventional rice plants were sprayed with hygromycin solutions of different concentrations (25 ∼ 100 mg/L) and toxic symptoms were observed in the following days. It was observed that yellow-brown necrotic spots appeared in the leaves and grains of conventional rice varieties after foliar spraying of 50 mg/L hygromycin, and the more spots were occurred with the higher hygromycin solution. There were 21.1 and 19.2 spots per cm 2 on flag leaves of indica varieties Jiayou 99 and C10, respectively; while 27.6% and 23.5% grains were yellow-brown in the varieties, respectively. The corresponding data for two japonica varieties Jiayou 5 and R5 were 11.8 and 10.7 for leave spots and 11.2% and 11.6% for yellow-brown grains, respectively. These results indicated that the two indica varieties are more sensitive to hygromycin than the two japonica varieties. In the treatment of hygromycin with above levels, the transgenic rice line KMD1 with the HPT gene showed no toxic symptoms on leaf or panicles. The γ-rays treated M 2 population of KMD1 was sprayed with 100 mg/L hygromycin solution at heading stage and 42 plants were screened out with toxic symptoms in leaves and panicles form 120000 plants. Among the 42 hygromycin susceptible plants, 14 plants with leaves available for in vitro feeding assay were subjected to the feeding of rice striped steam borers [Chilo supperssalis (Walker)] and all showed high resistance. The above results showed that spraying of 100 mg/L hygromycin solution at heading stage would lead to visually apparent toxic symptoms in susceptibility rice plants and hence

  2. A rapid method for the determination of microbial susceptibility using the firefly luciferase assay for adenosine triphosphate (ATP)

    Science.gov (United States)

    Vellend, H.; Tuttle, S. A.; Barza, M.; Weinstein, L.; Picciolo, G. L.; Chappelle, E. W.

    1975-01-01

    Luciferase assay for adenosine triphosphate (ATP) was optimized for pure bacteria in broth in order to evaluate if changes in bacterial ATP content could be used as a rapid measure of antibiotic effect on microorganisms. Broth cultures of log phase bacteria were incubated at 310 K (37 C) for 2.5 hours at antimicrobial concentrations which resulted in the best discrimination between sensitive and resistant strains. Eighty-seven strains of 11 bacterial species were studied for their susceptibility to 12 commonly used antimicrobial agents: ampicillin, Penicillin G, nafcillin, carbenicillin, cephalothin, tetracycline, erythromycin, clindamycin, gentamicin, nitrofurantoin, colistin, and chloramplenicol. The major advantage of the ATP system over existing methods of rapid microbial susceptibility testing is that the assay can be made specific for bacterial ATP.

  3. Rapid phenotypic assay of antimycobacterial susceptibility pattern by direct mycobacteria growth indicator tube and phage amplified biological assay compared to BACTEC 460 TB.

    Science.gov (United States)

    El-Sayed Zaki, Maysaa; Goda, Tarek

    2007-03-01

    The performance of antimycobacterial susceptibility testing for the first line drugs (isoniazid, streptomycine, rifampicin and ethambutol) with mycobacteria growth indicator tube (MGIT) and by bacteriophage amplified biological assay by FAST-plaque TB-MDR were compared to automated radiometric BACTEC 460 TB system. This study was carried on 84 sputum samples of positive Zhiel-Neelsen (ZN) smears. Sputum samples were subjected to culture and antimycobacterial susceptibility testing by BACTEC 460 TB. Samples were also tested by direct susceptibility tests for isoniazid (INH), ethambutol, rifampicin (RIF) and streptomycine by MGIT. Sensitive and resistant isolates for RIF were further studied by FAST-plaque TB-MDR for RIF resistance. The commonest resistance pattern by BACTEC 460 TB was for INH (32%) followed by RIF (24%) either alone or in combination with other drugs. Multiple drugs resistance was 20%. The agreement between BACTEC 460 TB and direct MGIT for resistant strains was 100% for INH and ethambutol, 91.7% for rifampicin, 80% for streptomycine and was 90% for MDR. FAST-plaque TB-MDR detected correctly all RIF resistant strains and 97.2% of the sensitive strains. For majority of strains direct susceptibility tests were available within 6.34-6.404 days (95% confidence interval) with direct mycobacteria growth tube, while results for FAST-plaque TB-MDR appear within 10.5-11.5 days from the time that the sputum was received in the laboratory (95% confidence interval). From this study, we could conclude that direct MGIT AST is the quickest method for screening antimycobacterial susceptibility pattern for the drugs commonly used (INH, RIF, etambutol, streptomycin) as results were available within 6.34-6.404 days. Also FAST-plaque TB-MDR method is accurate for detection of rifampicin resistance after primary culture which can be used as a surrogate marker for presence of MDR strains and the results were available within 10.5-11.5 days.

  4. Estimating Fitness by Competition Assays between Drug Susceptible and Resistant Mycobacterium tuberculosis of Predominant Lineages in Mumbai, India

    Science.gov (United States)

    Bhatter, Purva; Chatterjee, Anirvan; D'souza, Desiree; Tolani, Monica; Mistry, Nerges

    2012-01-01

    Background Multi Drug Resistant Tuberculosis (MDR TB) is a threat to global tuberculosis control. A significant fitness cost has been associated with DR strains from specific lineages. Evaluation of the influence of the competing drug susceptible strains on fitness of drug resistant strains may have an important bearing on understanding the spread of MDR TB. The aim of this study was to evaluate the fitness of MDR TB strains, from a TB endemic region of western India: Mumbai, belonging to 3 predominant lineages namely CAS, Beijing and MANU in the presence of drug susceptible strains from the same lineages. Methodology Drug susceptible strains from a single lineage were mixed with drug resistant strain, bearing particular non synonymous mutation (rpoB D516V; inhA, A16G; katG, S315T1/T2) from the same or different lineages. Fitness of M.tuberculosis (M.tb) strains was evaluated using the difference in growth rates obtained by using the CFU assay system. Conclusion/Significance While MANU were most fit amongst the drug susceptible strains of the 3 lineages, only Beijing MDR strains were found to grow in the presence of any of the competing drug susceptible strains. A disproportionate increase in Beijing MDR could be an alarm for an impending epidemic in this locale. In addition to particular non synonymous substitutions, the competing strains in an environment may impact the fitness of circulating drug resistant strains. PMID:22479407

  5. Rapid, low-cost fluorescent assay of β-lactamase-derived antibiotic resistance and related antibiotic susceptibility

    Science.gov (United States)

    Erdem, S. Sibel; Khan, Shazia; Palanisami, Akilan; Hasan, Tayyaba

    2014-10-01

    Antibiotic resistance (AR) is increasingly prevalent in low and middle income countries (LMICs), but the extent of the problem is poorly understood. This lack of knowledge is a critical deficiency, leaving local health authorities essentially blind to AR outbreaks and crippling their ability to provide effective treatment guidelines. The crux of the problem is the lack of microbiology laboratory capacity available in LMICs. To address this unmet need, we demonstrate a rapid and simple test of β-lactamase resistance (the most common form of AR) that uses a modified β-lactam structure decorated with two fluorophores quenched due to their close proximity. When the β-lactam core is cleaved by β-lactamase, the fluorophores dequench, allowing assay speeds of 20 min to be obtained with a simple, streamlined protocol. Furthermore, by testing in competition with antibiotics, the β-lactamase-associated antibiotic susceptibility can also be extracted. This assay can be easily implemented into standard lab work flows to provide near real-time information of β-lactamase resistance, both for epidemiological purposes as well as individualized patient care.

  6. Evaluation of the MODS culture technique for the diagnosis of tuberculous meningitis.

    Directory of Open Access Journals (Sweden)

    Maxine Caws

    2007-11-01

    Full Text Available Tuberculous meningitis (TBM is a devastating condition. The rapid instigation of appropraite chemotherapy is vital to reduce morbidity and mortality. However rapid diagnosis remains elusive; smear microscopy has extremely low sensitivity on cerebrospinal fluid (CSF in most laboratories and PCR requires expertise with advanced infrastructure and has sensitivity of only around 60% under optimal conditions. Neither technique allows for the microbiological isolation of M. tuberculosis and subsequent drug susceptibility testing. We evaluated the recently developed microscopic observation drug susceptibility (MODS assay format for speed and accuracy in diagnosing TBM.Two hundred and thirty consecutive CSF samples collected from 156 patients clinically suspected of TBM on presentation at a tertiary referal hospital in Vietnam were enrolled into the study over a five month period and tested by Ziehl-Neelsen (ZN smear, MODS, Mycobacterial growth Indicator tube (MGIT and Lowenstein-Jensen (LJ culture. Sixty-one samples were from patients already on TB therapy for >1day and 19 samples were excluded due to untraceable patient records. One hundred and fifty samples from 137 newly presenting patients remained. Forty-two percent (n = 57/137 of patients were deemed to have TBM by clinical diagnostic and microbiological criteria (excluding MODS. Sensitivity by patient against clinical gold standard for ZN smear, MODS MGIT and LJ were 52.6%, 64.9%, 70.2% and 70.2%, respectively. Specificity of all microbiological techniques was 100%. Positive and negative predictive values for MODS were 100% and 78.7%, respectively for HIV infected patients and 100% and 82.1% for HIV negative patients. The median time to positive was 6 days (interquartile range 5-7, significantly faster than MGIT at 15.5 days (interquartile range 12-24, and LJ at 24 days (interquartile range 18-35 days (P<0.01.We have shown MODS to be a sensitive, rapid technique for the diagnosis of TBM with

  7. Optimizing the HRP-2 in vitro malaria drug susceptibility assay using a reference clone to improve comparisons of Plasmodium falciparum field isolates

    Directory of Open Access Journals (Sweden)

    Rutvisuttinunt Wiriya

    2012-09-01

    Full Text Available Abstract Background Apparent emerging artemisinin-resistant Plasmodium falciparum malaria in Southeast Asia requires development of practical tools to monitor for resistant parasites. Although in vitro anti-malarial susceptibility tests are widely used, uncertainties remain regarding interpretation of P. falciparum field isolate values. Methods Performance parameters of the W2 P. falciparum clone (considered artemisinin “sensitive” were evaluated as a reference for the HRP-2 immediate ex vivo assay. Variability in W2 IC50s was assessed, including intra- and inter-assay variability among and between technicians in multiple experiments, over five freeze-thaw cycles, over five months of continuous culture, and before and after transport of drug-coated plates to remote field sites. Nominal drug plate concentrations of artesunate (AS and dihydroartemisinin (DHA were verified by LC-MS analysis. Plasmodium falciparum field isolate IC50s for DHA from subjects in an artemisinin-resistant area in Cambodia were compared with W2 susceptibility. Results Plate drug concentrations and day-to-day technical assay performance among technicians were important sources of variability for W2 IC50s within and between assays. Freeze-thaw cycles, long-term continuous culture, and transport to and from remote sites had less influence. Despite variability in W2 susceptibility, the median IC50s for DHA for Cambodian field isolates were higher (p Conclusion The W2 reference clone improved the interpretability of field isolate susceptibility from the immediate ex vivo HRP-2 assay from areas of artemisinin resistance. Methods to increase the reproducibility of plate coating may improve overall assay interpretability and utility.

  8. Alcator C-Mod Tokamak

    Data.gov (United States)

    Federal Laboratory Consortium — Alcator C-Mod at the Massachusetts Institute of Technology is operated as a DOE national user facility. Alcator C-Mod is a unique, compact tokamak facility that uses...

  9. Susceptibility of A. fumigatus specific T-cell assays to pre-analytic blood storage and PBMC cryopreservation greatly depends on readout platform and analytes.

    Science.gov (United States)

    Lauruschkat, Chris D; Wurster, Sebastian; Page, Lukas; Lazariotou, Maria; Dragan, Mariola; Weis, Philipp; Ullmann, Andrew J; Einsele, Hermann; Löffler, Jürgen

    2018-04-03

    Mould specific T-cells detectable by flow cytometry or ELISPOT were proposed as a novel biomarker in invasive aspergillosis. To define protocols facilitating sample shipment and longitudinal analysis, this study evaluated the susceptibility of different functional assays for A. fumigatus specific T-cell quantification and characterisation to pre-analytic delays. PBMCs from six healthy donors were analysed after immediate isolation, after 6 hours whole blood storage or after cryopreservation using three different common media. Functional responses to A. fumigatus lysate stimulation were comparatively assessed by flow cytometry, ELISPOT, and 14-plex cytokine assay. After 6 hours pre-analytic storage, all functional assays showed reduced detection rates, higher coefficients of variation (CV), and widely varying individual recovery indices of specific T-cell response. While cryopreservation resulted in sufficient yields and largely unaltered cellular composition, outcomes of functional readouts significantly differed from freshly processed samples. For CD154-based flow cytometry, only cryopreservation in RPMI supplemented with autologous serum resulted in satisfactory detection rates and CVs. For ELISPOT and cytokine secretion assays none of the cryopreservation protocols provided sufficient concordance with immediately processed samples. Even using the same readout platform, individual analytes widely varied in their susceptibility to cryopreservation, highlighting that distinct optimisation is required depending on the downstream assay. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

  10. Teaching Mods with Class

    DEFF Research Database (Denmark)

    Champion, Erik

    2012-01-01

    Are games worthy of academic attention? Can they be used effectively in the classroom, in the research laboratory, as an innovative design tool, as a persuasive political weapon? Game Mods: Design, Theory and Criticism aims to answer these and more questions. It features chapters by authors chosen...

  11. Analyzing pepsin degradation assay conditions used for allergenicity assessments to ensure that pepsin susceptible and pepsin resistant dietary proteins are distinguishable.

    Directory of Open Access Journals (Sweden)

    Rong Wang

    Full Text Available The susceptibility of a dietary protein to proteolytic degradation by digestive enzymes, such as gastric pepsin, provides information on the likelihood of systemic exposure to a structurally intact and biologically active macromolecule, thus informing on the safety of proteins for human and animal consumption. Therefore, the purpose of standardized in vitro degradation studies that are performed during protein safety assessments is to distinguish whether proteins of interest are susceptible or resistant to pepsin degradation via a study design that enables study-to-study comparison. Attempting to assess pepsin degradation under a wide-range of possible physiological conditions poses a problem because of the lack of robust and consistent data collected under a large-range of sub-optimal conditions, which undermines the needs to harmonize in vitro degradation conditions. This report systematically compares the effects of pH, incubation time, and pepsin-to-substrate protein ratio on the relative degradation of five dietary proteins: three pepsin susceptible proteins [ribulose 1,5-bisphosphate carboxylase-oxygenase (Rubisco, horseradish peroxidase (HRP, hemoglobin (Hb], and two pepsin resistant proteins [lipid transfer protein (LTP and soybean trypsin inhibitor (STI]. The results indicate that proteins susceptible to pepsin degradation are readily distinguishable from pepsin-resistant proteins when the reaction conditions are within the well-characterized optima for pepsin. The current standardized in vitro pepsin resistant assay with low pH and high pepsin-to-substrate ratio fits this purpose. Using non-optimal pH and/or pepsin-to-substrate protein ratios resulted in susceptible proteins no longer being reliably degraded by this stomach enzyme, which compromises the ability of this in vitro assay to distinguish between resistant and susceptible proteins and, therefore, no longer providing useful data to an overall weight-of-evidence approach to

  12. BioTimer Assay, a new method for counting Staphylococcus spp. in biofilm without sample manipulation applied to evaluate antibiotic susceptibility of biofilm.

    Science.gov (United States)

    Pantanella, Fabrizio; Valenti, Piera; Frioni, Alessandra; Natalizi, Tiziana; Coltella, Luana; Berlutti, Francesca

    2008-12-01

    The medical device-related infections are frequently a consequence of Staphylococcus biofilm, a lifestyle enhancing bacterial resistance to antibiotics. Antibiotic susceptibility tests are usually performed on planktonic forms of clinical isolates. Some methods have been developed to perform antibiotic susceptibility tests on biofilm. However, none of them counts bacterial inoculum. As antibiotic susceptibility is related to bacterial inoculum, the test results could be mistaken. Here, a new method, BioTimer Assay (BTA), able to count bacteria in biofilm without any manipulation of samples, is presented. Moreover, the BTA method is applied to analyze antibiotic susceptibility of six Staphylococcus strains in biofilm and to determine the number of viable bacteria in the presence of sub-inhibitory doses of four different antibiotics. To validate BTA, the new method was compared to reference methods both for counting and antibiotic susceptibility tests. A high agreement between BTA and reference methods is found on planktonic forms. Therefore, BTA was employed to count bacteria in biofilm and to analyze biofilm antibiotic susceptibility. Results confirm the high resistance to antibiotics of Staphylococcus biofilm. Moreover, BTA counts the number of viable bacteria in the presence of sub-inhibitory doses of antibiotics. The results show that the number of viable bacteria depends on sub-inhibitory doses, age of biofilm and type of antibiotic. In particular, differently to gentamicin and ampicillin, sub-inhibitory doses of ofloxacin and azithromycin reduce the number of viable bacteria at lower extent in young than in old biofilm. In conclusion, BTA is a reliable, rapid, easy-to-perform, and versatile method, and it can be considered a useful tool to analyze antibiotic susceptibility of Staphylococcus spp. in biofilm.

  13. A multiplex single nucleotide polymorphism typing assay for detecting mutations that result in decreased fluoroquinolone susceptibility in Salmonella enterica serovars Typhi and Paratyphi A.

    LENUS (Irish Health Repository)

    Song, Yajun

    2010-08-01

    OBJECTIVES: Decreased susceptibility to fluoroquinolones has become a major problem for the successful therapy of human infections caused by Salmonella enterica, especially the life-threatening typhoid and paratyphoid fevers. METHODS: By using Luminex xTAG beads, we developed a rapid, reliable and cost-effective multiplexed genotyping assay for simultaneously detecting 11 mutations in gyrA, gyrB and parE of S. enterica serovars Typhi and Paratyphi A that result in nalidixic acid resistance (Nal(R)) and\\/or decreased susceptibility to fluoroquinolones. RESULTS: This assay yielded unambiguous single nucleotide polymorphism calls on extracted DNA from 292 isolates of Salmonella Typhi (Nal(R) = 223 and Nal(S) = 69) and 106 isolates of Salmonella Paratyphi A (Nal(R) = 24 and Nal(S) = 82). All of the 247 Nal(R) Salmonella Typhi and Salmonella Paratyphi A isolates were found to harbour at least one of the target mutations, with GyrA Phe-83 as the most common one (143\\/223 for Salmonella Typhi and 18\\/24 for Salmonella Paratyphi A). We also identified three GyrB mutations in eight Nal(S) Salmonella Typhi isolates (six for GyrB Phe-464, one for GyrB Leu-465 and one for GyrB Asp-466), and mutations GyrB Phe-464 and GyrB Asp-466 seem to be related to the decreased ciprofloxacin susceptibility phenotype in Salmonella Typhi. This assay can also be used directly on boiled single colonies. CONCLUSIONS: The assay presented here would be useful for clinical and reference laboratories to rapidly screen quinolone-resistant isolates of Salmonella Typhi and Salmonella Paratyphi A, and decipher the underlying genetic changes for epidemiological purposes.

  14. Mod II Stirling engine overviews

    Science.gov (United States)

    Farrell, Roger A.

    1988-01-01

    The Mod II engine is a second-generation automotive Stirling engine (ASE) optimized for part-power operation. It has been designed specifically to meet the fuel economy and exhaust emissions objectives of the ASE development program. The design, test experience, performance, and comparison of data to analytical performance estimates of the Mod II engine to date are reviewed. Estimates of Mod II performance in its final configuration are also given.

  15. Implementación de un sistema de telediagnóstico de tuberculosis y determinación de multidrogorresistencia basada en el método Mods en Trujillo, Perú

    Directory of Open Access Journals (Sweden)

    Luis Rodríguez

    Full Text Available Objetivos. Implementar un sistema para el diagnóstico remoto de tuberculosis y multidrogorresistencia (MDR usando el método Microscopic-Observation Drug Susceptibility Assay (MODS en el Laboratorio de Micobacterias del Centro de Excelencia en Tuberculosis de Trujillo (CENEX-Trujillo. El sistema incluyó una variante de un algoritmo de reconocimiento de Mycobacterium tuberculosis recientemente reportado a partir de imágenes digitales de cultivos MODS de muestras de esputo. Materiales y métodos. Se optimizó un algoritmo de reconocimiento por medio de un reentrenamiento del modelo estadístico basado en imágenes digitales de cultivos MODS provenientes del Laboratorio de Micobacterias del CENEX-Trujillo. Se obtuvieron imágenes de 50 cultivos MODS positivos de pacientes con sospecha de tuberculosis multidrogorresistente entre enero y octubre de 2012 en el CENEX-Trujillo. Resultados. La sensibilidad y la especificidad en objetos, para reconocer cordones de tuberculosis fueron de 92,04% y de 94,93% respectivamente. La sensibilidad y la especificidad en foto, para determinar un campo positivo a tuberculoisis fueron 95,4% y de 98,07% respectivamente. Conclusiones. Los resultados demostraron la factibilidad de la implementación de telediagnóstico en lugares remotos, el cual puede contribuir con la detección temprana de tuberculosis multidrogorresistente mediante el método MODS

  16. Properties of the periplasmic ModA molybdate-binding protein of Escherichia coli.

    Science.gov (United States)

    Rech, S; Wolin, C; Gunsalus, R P

    1996-02-02

    The modABCD operon, located at 17 min on the Escherichia coli chromosome, encodes the protein components of a high affinity molybdate uptake system. Sequence analysis of the modA gene (GenBank L34009) predicts that it encodes a periplasmic binding protein based on the presence of a leader-like sequence at its N terminus. To examine the properties of the ModA protein, the modA structural gene was overexpressed, and its product was purified. The ModA protein was localized to the periplasmic space of the cell, and it was released following a gentle osmotic shock. The N-terminal sequence of ModA confirmed that a leader region of 24 amino acids was removed upon export from the cell. The apparent size of ModA is 31.6 kDa as determined by gel sieve chromatography, whereas it is 22.5 kDa when examined by SDS-polyacrylamide gel electrophoresis. A ligand-dependent protein mobility shift assay was devised using a native polyacrylamide gel electrophoresis protocol to examine binding of molybdate and other anions to the ModA periplasmic protein. Whereas molybdate and tungstate were bound with high affinity (approximately 5 microM), sulfate, chromate, selenate, phosphate, and chlorate did not bind even when tested at 2 mM. A UV spectral assay revealed apparent Kd values of binding for molybdate and tungstate of 3 and 7 microM, respectively. Strains defective in the modA gene were unable to transport molybdate unless high levels of the anion were supplied in the medium. Therefore the modA gene product is essential for high affinity molybdate uptake by the cell. Tungstate interference of molybdate acquisition by the cell is apparently due in part to the high affinity of the ModA protein for this anion.

  17. A new rapid colourimetric method for testing Mycobacterium tuberculosis susceptibility to isoniazid and rifampicin: a crystal violet decolourisation assay

    Directory of Open Access Journals (Sweden)

    Ahmet Yilmaz Coban

    2014-04-01

    Full Text Available The aim of this study was to investigate the performance of a new and accurate method for the detection of isoniazid (INH and rifampicin (RIF resistance among Mycobacterium tuberculosis isolates using a crystal violet decolourisation assay (CVDA. Fifty-five M. tuberculosis isolates obtained from culture stocks stored at -80ºC were tested. After bacterial inoculation, the samples were incubated at 37ºC for seven days and 100 µL of CV (25 mg/L stock solution was then added to the control and sample tubes. The tubes were incubated for an additional 24-48 h. CV (blue/purple was decolourised in the presence of bacterial growth; thus, if CV lost its colour in a sample containing a drug, the tested isolate was reported as resistant. The sensitivity, specificity, positive predictive value, negative predictive value and agreement for INH were 92.5%, 96.4%, 96.1%, 93.1% and 94.5%, respectively, and 88.8%, 100%, 100%, 94.8% and 96.3%, respectively, for RIF. The results were obtained within eight-nine days. This study shows that CVDA is an effective method to detect M. tuberculosis resistance to INH and RIF in developing countries. This method is rapid, simple and inexpensive. Nonetheless, further studies are necessary before routine laboratory implementation.

  18. Proteomic and biochemical assays of glutathione-related proteins in susceptible and multiple herbicide resistant Avena fatua L.

    Science.gov (United States)

    Burns, Erin E; Keith, Barbara K; Refai, Mohammed Y; Bothner, Brian; Dyer, William E

    2017-08-01

    Extensive herbicide usage has led to the evolution of resistant weed populations that cause substantial crop yield losses and increase production costs. The multiple herbicide resistant (MHR) Avena fatua L. populations utilized in this study are resistant to members of all selective herbicide families, across five modes of action, available for A. fatua control in U.S. small grain production, and thus pose significant agronomic and economic threats. Resistance to ALS and ACCase inhibitors is not conferred by target site mutations, indicating that non-target site resistance mechanisms are involved. To investigate the potential involvement of glutathione-related enzymes in the MHR phenotype, we used a combination of proteomic, biochemical, and immunological approaches to compare their constitutive activities in herbicide susceptible (HS1 and HS2) and MHR (MHR3 and MHR4) A. fatua plants. Proteomic analysis identified three tau and one phi glutathione S-transferases (GSTs) present at higher levels in MHR compared to HS plants, while immunoassays revealed elevated levels of lambda, phi, and tau GSTs. GST specific activity towards 1-chloro-2,4-dinitrobenzene was 1.2-fold higher in MHR4 than in HS1 plants and 1.3- and 1.2-fold higher in MHR3 than in HS1 and HS2 plants, respectively. However, GST specific activities towards fenoxaprop-P-ethyl and imazamethabenz-methyl were not different between untreated MHR and HS plants. Dehydroascorbate reductase specific activity was 1.4-fold higher in MHR than HS plants. Pretreatment with the GST inhibitor NBD-Cl did not affect MHR sensitivity to fenoxaprop-P-ethyl application, while the herbicide safener and GST inducer mefenpyr reduced the efficacy of low doses of fenoxaprop-P-ethyl on MHR4 but not MHR3 plants. Mefenpyr treatment also partially reduced the efficacy of thiencarbazone-methyl or mesosulfuron-methyl on MHR3 or MHR4 plants, respectively. Overall, the GSTs described here are not directly involved in enhanced rates of

  19. Diagnostic multiplex polymerase chain reaction assay for the identification of Pseudomonas aeruginosa from the skin biopsy specimens in burn wound infections and detection of antibiotic susceptibility

    International Nuclear Information System (INIS)

    Mashouf, Rasoul Y.; Farahani, Hadi S.; Zamani, A.

    2008-01-01

    Objective was to identify Pseudomonas aeruginosa (P. aeruginosa) from the skin biopsy specimens in burn wound infections by multiplex polymerase chain reaction (M-PCR) and detection of antimicrobial susceptibility of isolates from culture. We conducted the cross-sectional study in 140 patients with wound infections who admitted to referral burn center of Motahari, Tehran, Iran, during a 12-month period from 2005-2006. Skin biopsy specimens were aseptically taken from each patient, one for PCR and one for bacterial culture. A M-PCR test based on simultaneous amplification of 2 lipoprotein genes: oprI and oprL, was used to directly detect fluorescent pseudomonades and P. aeruginosa in skin biopsy specimens. The susceptibility of P. aeruginosa isolates to 16 antibiotics was determined using the disc diffusion method. Out of 140 biopsy specimens, M-PCR detected 66 (47.2%) isolates, while culture detected 57 (40.7%) isolates as P. aeruginosa. Positive results for both genes which observed only for P. aeruginosa, while only one gene, oprI, was amplified from other fluorescent pseudomonades (n=12) and all other bacterial tested (n=62) were negative by the amplification test. The most effective antibiotics against isolate of P. aeruginosa were cefepime (79%), azetreonam (76%), ticarcillin-clavulanic acid (68%), tobramycin (62%) and amikacin (61%). Multiplex PCR assay appears promising for the rapid and sensitive detection of P. aeruginosa from the burned skin biopsy specimens. Simultaneous amplification of 2 lipoprotein genes: oprI and oprL could detect P. aeruginosa and oprI gene only for other fluorescent pseudomonades. (author)

  20. MOD silver metallization for photovoltaics

    Science.gov (United States)

    Vest, G. M.; Vest, R. W.

    1984-01-01

    The development of flat plate solar arrays is reported. Photovoltaic cells require back side metallization and a collector grid system on the front surface. Metallo-organic decomposition (MOD) silver films can eliminate most of the present problems with silver conductors. The objectives are to: (1) identify and characterize suitable MO compounds; (2) develop generic synthesis procedures for the MO compounds; (3) develop generic fabrication procedures to screen printable MOD silver inks; (4) optimize processing conditions to produce grid patterns and photovoltaic cells; and (5) develop a model which describes the adhesion between the fired silver film and the silicon surface.

  1. Rapid identification and susceptibility testing of uropathogenic microbes via immunosorbent ATP-bioluminescence assay on a microfluidic simulator for antibiotic therapy.

    Science.gov (United States)

    Dong, Tao; Zhao, Xinyan

    2015-02-17

    The incorporation of pathogen identification with antimicrobial susceptibility testing (AST) was implemented on a concept microfluidic simulator, which is well suited for personalizing antibiotic treatment of urinary tract infections (UTIs). The microfluidic device employs a fiberglass membrane sandwiched between two polypropylene components, with capture antibodies immobilized on the membrane. The chambers in the microfluidic device share the same geometric distribution as the wells in a standard 384-well microplate, resulting in compatibility with common microplate readers. Thirteen types of common uropathogenic microbes were selected as the analytes in this study. The microbes can be specifically captured by various capture antibodies and then quantified via an ATP bioluminescence assay (ATP-BLA) either directly or after a variety of follow-up tests, including urine culture, antibiotic treatment, and personalized antibiotic therapy simulation. Owing to the design of the microfluidic device, as well as the antibody specificity and the ATP-BLA sensitivity, the simulator was proven to be able to identify UTI pathogen species in artificial urine samples within 20 min and to reliably and simultaneously verify the antiseptic effects of eight antibiotic drugs within 3-6 h. The measurement range of the device spreads from 1 × 10(3) to 1 × 10(5) cells/mL in urine samples. We envision that the medical simulator might be broadly employed in UTI treatment and could serve as a model for the diagnosis and treatment of other diseases.

  2. Sensitive Deep-Sequencing-Based HIV-1 Genotyping Assay To Simultaneously Determine Susceptibility to Protease, Reverse Transcriptase, Integrase, and Maturation Inhibitors, as Well as HIV-1 Coreceptor Tropism

    Science.gov (United States)

    Gibson, Richard M.; Meyer, Ashley M.; Winner, Dane; Archer, John; Feyertag, Felix; Ruiz-Mateos, Ezequiel; Leal, Manuel; Robertson, David L.; Schmotzer, Christine L.

    2014-01-01

    With 29 individual antiretroviral drugs available from six classes that are approved for the treatment of HIV-1 infection, a combination of different phenotypic and genotypic tests is currently needed to monitor HIV-infected individuals. In this study, we developed a novel HIV-1 genotypic assay based on deep sequencing (DeepGen HIV) to simultaneously assess HIV-1 susceptibilities to all drugs targeting the three viral enzymes and to predict HIV-1 coreceptor tropism. Patient-derived gag-p2/NCp7/p1/p6/pol-PR/RT/IN- and env-C2V3 PCR products were sequenced using the Ion Torrent Personal Genome Machine. Reads spanning the 3′ end of the Gag, protease (PR), reverse transcriptase (RT), integrase (IN), and V3 regions were extracted, truncated, translated, and assembled for genotype and HIV-1 coreceptor tropism determination. DeepGen HIV consistently detected both minority drug-resistant viruses and non-R5 HIV-1 variants from clinical specimens with viral loads of ≥1,000 copies/ml and from B and non-B subtypes. Additional mutations associated with resistance to PR, RT, and IN inhibitors, previously undetected by standard (Sanger) population sequencing, were reliably identified at frequencies as low as 1%. DeepGen HIV results correlated with phenotypic (original Trofile, 92%; enhanced-sensitivity Trofile assay [ESTA], 80%; TROCAI, 81%; and VeriTrop, 80%) and genotypic (population sequencing/Geno2Pheno with a 10% false-positive rate [FPR], 84%) HIV-1 tropism test results. DeepGen HIV (83%) and Trofile (85%) showed similar concordances with the clinical response following an 8-day course of maraviroc monotherapy (MCT). In summary, this novel all-inclusive HIV-1 genotypic and coreceptor tropism assay, based on deep sequencing of the PR, RT, IN, and V3 regions, permits simultaneous multiplex detection of low-level drug-resistant and/or non-R5 viruses in up to 96 clinical samples. This comprehensive test, the first of its class, will be instrumental in the development of new

  3. Modélisation dynamique et SIG

    OpenAIRE

    Hélène MATHIAN; Lena SANDERS

    1993-01-01

    Méthodes de modélisation dynamique et SIG sont ici couplés. Cette intégration SIG-modélisation dynamique aide à l’élaboration des modèles et constitue un véritable outil de recherche en géographie.

  4. ModA and ModB, two ADP-ribosyltransferases encoded by bacteriophage T4: catalytic properties and mutation analysis.

    Science.gov (United States)

    Tiemann, Bernd; Depping, Reinhard; Gineikiene, Egle; Kaliniene, Laura; Nivinskas, Rimas; Rüger, Wolfgang

    2004-11-01

    Bacteriophage T4 encodes three ADP-ribosyltransferases, Alt, ModA, and ModB. These enzymes participate in the regulation of the T4 replication cycle by ADP-ribosylating a defined set of host proteins. In order to obtain a better understanding of the phage-host interactions and their consequences for regulating the T4 replication cycle, we studied cloning, overexpression, and characterization of purified ModA and ModB enzymes. Site-directed mutagenesis confirmed that amino acids, as deduced from secondary structure alignments, are indeed decisive for the activity of the enzymes, implying that the transfer reaction follows the Sn1-type reaction scheme proposed for this class of enzymes. In vitro transcription assays performed with Alt- and ModA-modified RNA polymerases demonstrated that the Alt-ribosylated polymerase enhances transcription from T4 early promoters on a T4 DNA template, whereas the transcriptional activity of ModA-modified polymerase, without the participation of T4-encoded auxiliary proteins for middle mode or late transcription, is reduced. The results presented here support the conclusion that ADP-ribosylation of RNA polymerase and of other host proteins allows initial phage-directed mRNA synthesis reactions to escape from host control. In contrast, subsequent modification of the other cellular target proteins limits transcription from phage early genes and participates in redirecting transcription to phage middle and late genes.

  5. Optimizing the HRP-2 In Vitro Malaria Drug Susceptibility Assay Using a Reference Clone to Improve Comparisons of Plasmodium falciparum Field Isolates

    Science.gov (United States)

    2012-09-13

    and artesunate (AS), as well as key long-acting agents, including mefloquine (MQ) and chloroquine (CQ), which were used as drug susceptible and...Table 1). The W2 clone was resistant to CQ but susceptible to mefloquine when compared to other commonly used clones D6 and 3D7, while 3D7 was less...Decreased in vitro susceptibility of Plasmodium falciparum isolates to artesunate, mefloquine , chloroquine, and quinine in Cambodia from 2001 to 2007

  6. Solar disinfection of MODS mycobacterial cultures in resource-poor settings.

    Directory of Open Access Journals (Sweden)

    Ruvandhi Nathavitharana

    2007-10-01

    Full Text Available Safe disposal of TB culture material in which the infectious burden of clinical samples has been greatly amplified is an important challenge in resource-limited settings. The bactericidal capacity of solar cookers has been demonstrated previously for conventional bacteria and contaminated clinical waste. We investigated the use of a simple solar cooker for the sterilization of mycobacterial broth cultures from the microscopic observation drug susceptibility assay (MODS.Simulated TB culture materials were prepared by inoculating 24-well MODS plates with 500 microL of a known concentration of Mycobacterium bovis BCG. In a series of experiments, samples were simultaneously placed inside a box-type solar cooker and control box and removed at timepoints between 15 minutes and 6 hours. Quantitative cultures were performed using retrieved samples to determine sterilization effect.All cultures from the control box were positive at or within 1-4 logs of inoculation concentration. Simulated culture plates at concentrations from 10(3 colony-forming-units (CFU/ml to 10(7 CFU/ml were completely sterilized after only one hour of cooker exposure, at temperatures between 50-102 degrees C. At 10(9 CFU/ml (far in excess of diagnostic cultures, it was only possible to recover mycobacterial growth in plates removed after 15 minutes. By 30 minutes all plates were effectively sterilized.Solar disinfection provides a very effective, safe and low-cost alternative to conventional equipment used for disposal of mycobacterial culture material. Effect of climatic conditions and optimal operating procedure remain to be defined.

  7. Solar disinfection of MODS mycobacterial cultures in resource-poor settings.

    Science.gov (United States)

    Nathavitharana, Ruvandhi; Coronel, Jorge; Moore, David A J

    2007-10-31

    Safe disposal of TB culture material in which the infectious burden of clinical samples has been greatly amplified is an important challenge in resource-limited settings. The bactericidal capacity of solar cookers has been demonstrated previously for conventional bacteria and contaminated clinical waste. We investigated the use of a simple solar cooker for the sterilization of mycobacterial broth cultures from the microscopic observation drug susceptibility assay (MODS). Simulated TB culture materials were prepared by inoculating 24-well MODS plates with 500 microL of a known concentration of Mycobacterium bovis BCG. In a series of experiments, samples were simultaneously placed inside a box-type solar cooker and control box and removed at timepoints between 15 minutes and 6 hours. Quantitative cultures were performed using retrieved samples to determine sterilization effect. All cultures from the control box were positive at or within 1-4 logs of inoculation concentration. Simulated culture plates at concentrations from 10(3) colony-forming-units (CFU)/ml to 10(7) CFU/ml were completely sterilized after only one hour of cooker exposure, at temperatures between 50-102 degrees C. At 10(9) CFU/ml (far in excess of diagnostic cultures), it was only possible to recover mycobacterial growth in plates removed after 15 minutes. By 30 minutes all plates were effectively sterilized. Solar disinfection provides a very effective, safe and low-cost alternative to conventional equipment used for disposal of mycobacterial culture material. Effect of climatic conditions and optimal operating procedure remain to be defined.

  8. Obamas Fortsatte Krig mod Terror

    DEFF Research Database (Denmark)

    Ulrich, Philip Christian

    2013-01-01

    Kronikken argumenterer for at den type overvågningsskandaler som er fulgt i kølvandet på Edward Snowdens afsløringer blot er et symptom på den nye fase af krigen mod terror som Obama administrationen har ønsket at føre USA ind i. Den nye fase vil være præget af mere efterretningsvirksomhed snarere...

  9. The Escherichia coli modE gene: effect of modE mutations on molybdate dependent modA expression.

    Science.gov (United States)

    McNicholas, P M; Chiang, R C; Gunsalus, R P

    1996-11-15

    The Escherichia coli modABCD operon, which encodes a high-affinity molybdate uptake system, is transcriptionally regulated in response to molybdate availability by ModE. Here we describe a highly effective enrichment protocol, applicable to any gene with a repressor role, and establish its application in the isolation of transposon mutations in modE. In addition we show that disruption of the ModE C-terminus abolishes derepression in the absence of molybdate, implying this region of ModE controls the repressor activity. Finally, a mutational analysis of a proposed molybdate binding motif indicates that this motif does not function in regulating the repressor activity of ModE.

  10. Evaluation of rapid alternative methods for drug susceptibility testing in clinical isolates of Mycobacterium tuberculosis

    Directory of Open Access Journals (Sweden)

    Luciano Mengatto

    2006-08-01

    Full Text Available A study was carried out to compare the performance of a commercial method (MGIT and four inexpensive drug susceptibility methods: nitrate reductase assay (NRA, microscopic observation drug susceptibility (MODS assay, MTT test, and broth microdilution method (BMM. A total of 64 clinical isolates of Mycobacterium tuberculosis were studied. The Lowenstein-Jensen proportion method (PM was used as gold standard. MGIT, NRA, MODS, and MTT results were available on an average of less than 10 days, whereas BMM results could be reported in about 20 days. Most of the evaluated tests showed excellent performance for isoniazid and rifampicin, with sensitivity and specificity values > 90%. With most of the assays, sensitivity for ethambutol was low (62-87% whereas for streptomycin, sensitivity values ranged from 84 to 100%; NRA-discrepancies were associated with cultures with a low proportion of EMB-resistant organisms while most discrepancies with quantitative tests (MMT and BMM were seen with isolates whose minimal inhibitory concentrations fell close the cutoff. MGIT is reliable but still expensive. NRA is the most inexpensive and easiest method to perform without changing the organization of the routine PM laboratory performance. While MODS, MTT, and BMM, have the disadvantage from the point of view of biosafety, they offer the possibility of detecting partial resistant strains. This study shows a very good level of agreement of the four low-cost methods compared to the PM for rapid detection of isoniazid, rifampicin and streptomycin resistance (Kappa values > 0.8; more standardization is needed for ethambutol.

  11. TC-13 Mod 0 and Mod 2 Steam Catapult Test Site

    Data.gov (United States)

    Federal Laboratory Consortium — Located on 11,000 feet of test runway, the TC-13 Mod 0 and Mod 2 Steam Catapult Test Site has in-ground catapults identical to those aboard carriers. This test site...

  12. The General Electric MOD-1 wind turbine generator program

    Science.gov (United States)

    Poor, R. H.; Hobbs, R. B.

    1979-01-01

    The design, fabrication, installation and checkout of MOD-1, a megawatt class wind turbine generator which generates utility grade electrical power, is described. A MOD-1/MOD-1A tradeoff study is discussed.

  13. RELAP5/MOD2 development

    International Nuclear Information System (INIS)

    Miller, C.S.

    1986-01-01

    Status of the RELAP5/MOD2 computer code is discussed. While the code is undergoing international assessment, emphasis is on user support and code maintenance with modifications allowed only for error correction and user convenience improvements. User support discussed is the response to user inquiries, maintenance of manuals and the implementation of a PC based newletter service. The major 1986 user convenience improvement is the self-initialization option. The method is discussed and examples for PWR ''U tube'' and ''once through'' plants are illustrated. Future plans are also outlined

  14. MOD silver metallization for photovoltaics

    Science.gov (United States)

    Vest, G. M.; Vest, R. W.

    1985-01-01

    The feasibility of utilizing metallo-organic decomposition (MOD) silver inks were investigated for front contact metallization of solar cells. Generic synthesis procedures were developed for all metallo-organic compounds investigated. Silver neodecanoate was found to be the most suitable silver metallo-organic compound for use in thick film inks, but the quality of the inks was found to be highly dependent on its purity. Although neither the process nor inks were completely optimized for solar cell front contact metallization, they show great promise for this application.

  15. Molybdate transporter ModABC is important for Pseudomonas aeruginosa chronic lung infection.

    Science.gov (United States)

    Périnet, Simone; Jeukens, Julie; Kukavica-Ibrulj, Irena; Ouellet, Myriam M; Charette, Steve J; Levesque, Roger C

    2016-01-12

    Mechanisms underlying the success of Pseudomonas aeruginosa in chronic lung infection among cystic fibrosis (CF) patients are poorly defined. The modA gene was previously linked to in vivo competitiveness of P. aeruginosa by a genetic screening in the rat lung. This gene encodes a subunit of transporter ModABC, which is responsible for extracellular uptake of molybdate. This compound is essential for molybdoenzymes, including nitrate reductases. Since anaerobic growth conditions are known to occur during CF chronic lung infection, inactivation of a molybdate transporter could inhibit proliferation through the inactivation of denitrification enzymes. Hence, we performed phenotypic characterization of a modA mutant strain obtained by signature-tagged mutagenesis (STM_modA) and assessed its virulence in vivo with two host models. The STM_modA mutant was in fact defective for anaerobic growth and unable to use nitrates in the growth medium for anaerobic respiration. Bacterial growth and nitrate usage were restored when the medium was supplemented with molybdate. Most significantly, the mutant strain showed reduced virulence compared to wild-type strain PAO1 according to a competitive index in the rat model of chronic lung infection and a predation assay with Dictyostelium discoideum amoebae. As the latter took place in aerobic conditions, the in vivo impact of the mutation in modA appears to extend beyond its effect on anaerobic growth. These results support the modABC-encoded transporter as important for the pathogenesis of P. aeruginosa, and suggest that enzymatic machinery implicated in anaerobic growth during chronic lung infection in CF merits further investigation as a potential target for therapeutic intervention.

  16. IT Education, Girls, and Game Modding

    OpenAIRE

    Yucel, Ibrahim; Zupko, Joseph; Seif El-Nasr, Magy

    2006-01-01

    Researchers have argued that video games have great utility for learning. Games promote experiential learning and can be used to facilitate active learning. This paper examines the potential of video games in education. In particular, it examines the benefits of game modding compared to playing and/or creating games. However, video game classes have been primarily attended by male students. This paper looks further into the gender issue regarding the use of video game modding in education. Th...

  17. Reduced Maximal Inhibition in Phenotypic Susceptibility Assays Indicates that Viral Strains Resistant to the CCR5 Antagonist Maraviroc Utilize Inhibitor-Bound Receptor for Entry▿

    Science.gov (United States)

    Westby, Mike; Smith-Burchnell, Caroline; Mori, Julie; Lewis, Marilyn; Mosley, Michael; Stockdale, Mark; Dorr, Patrick; Ciaramella, Giuseppe; Perros, Manos

    2007-01-01

    Maraviroc is a CCR5 antagonist in clinical development as one of a new class of antiretrovirals targeting human immunodeficiency virus type 1 (HIV-1) coreceptor binding. We investigated the mechanism of HIV resistance to maraviroc by using in vitro sequential passage and site-directed mutagenesis. Serial passage through increasing maraviroc concentrations failed to select maraviroc-resistant variants from some laboratory-adapted and clinical isolates of HIV-1. However, high-level resistance to maraviroc was selected from three of six primary isolates passaged in peripheral blood lymphocytes (PBL). The SF162 strain acquired resistance to maraviroc in both treated and control cultures; all resistant variants were able to use CXCR4 as a coreceptor. In contrast, maraviroc-resistant virus derived from isolates CC1/85 and RU570 remained CCR5 tropic, as evidenced by susceptibility to the CCR5 antagonist SCH-C, resistance to the CXCR4 antagonist AMD3100, and an inability to replicate in CCR5 Δ32/Δ32 PBL. Strain-specific mutations were identified in the V3 loop of maraviroc-resistant CC1/85 and RU570. The envelope-encoding region of maraviroc-resistant CC1/85 was inserted into an NL4-3 background. This recombinant virus was completely resistant to maraviroc but retained susceptibility to aplaviroc. Reverse mutation of gp120 residues 316 and 323 in the V3 loop (numbering from HXB2) to their original sequence restored wild-type susceptibility to maraviroc, while reversion of either mutation resulted in a partially sensitive virus with reduced maximal inhibition (plateau). The plateaus are consistent with the virus having acquired the ability to utilize maraviroc-bound receptor for entry. This hypothesis was further corroborated by the observation that a high concentration of maraviroc blocks the activity of aplaviroc against maraviroc-resistant virus. PMID:17182681

  18. Reduced maximal inhibition in phenotypic susceptibility assays indicates that viral strains resistant to the CCR5 antagonist maraviroc utilize inhibitor-bound receptor for entry.

    Science.gov (United States)

    Westby, Mike; Smith-Burchnell, Caroline; Mori, Julie; Lewis, Marilyn; Mosley, Michael; Stockdale, Mark; Dorr, Patrick; Ciaramella, Giuseppe; Perros, Manos

    2007-03-01

    Maraviroc is a CCR5 antagonist in clinical development as one of a new class of antiretrovirals targeting human immunodeficiency virus type 1 (HIV-1) coreceptor binding. We investigated the mechanism of HIV resistance to maraviroc by using in vitro sequential passage and site-directed mutagenesis. Serial passage through increasing maraviroc concentrations failed to select maraviroc-resistant variants from some laboratory-adapted and clinical isolates of HIV-1. However, high-level resistance to maraviroc was selected from three of six primary isolates passaged in peripheral blood lymphocytes (PBL). The SF162 strain acquired resistance to maraviroc in both treated and control cultures; all resistant variants were able to use CXCR4 as a coreceptor. In contrast, maraviroc-resistant virus derived from isolates CC1/85 and RU570 remained CCR5 tropic, as evidenced by susceptibility to the CCR5 antagonist SCH-C, resistance to the CXCR4 antagonist AMD3100, and an inability to replicate in CCR5 Delta32/Delta32 PBL. Strain-specific mutations were identified in the V3 loop of maraviroc-resistant CC1/85 and RU570. The envelope-encoding region of maraviroc-resistant CC1/85 was inserted into an NL4-3 background. This recombinant virus was completely resistant to maraviroc but retained susceptibility to aplaviroc. Reverse mutation of gp120 residues 316 and 323 in the V3 loop (numbering from HXB2) to their original sequence restored wild-type susceptibility to maraviroc, while reversion of either mutation resulted in a partially sensitive virus with reduced maximal inhibition (plateau). The plateaus are consistent with the virus having acquired the ability to utilize maraviroc-bound receptor for entry. This hypothesis was further corroborated by the observation that a high concentration of maraviroc blocks the activity of aplaviroc against maraviroc-resistant virus.

  19. A novel multiplex polymerase chain reaction assay for detection of both HLA-A*31:01/HLA-B*15:02 alleles, which confer susceptibility to carbamazepine-induced severe cutaneous adverse reactions.

    Science.gov (United States)

    Nguyen, D V; Vidal, C; Chi, H C; Do, N T Q; Fulton, R; Li, J; Fernando, S L

    2017-12-01

    HLA-A*31:01 and HLA-B*15:02 have been widely reported to confer genetic susceptibility to carbamazepine (CBZ)-induced severe cutaneous adverse reactions (SCARs). Accordingly, the screening for these alleles has been highly recommended to prevent SCAR prior to introducing CBZ therapy. Although a number of methods are available for screening of HLA-A*31:01 or HLA-B*15:02 alleles separately, developing an assay that can detect both these alleles would be more clinically practical, cost-effective and less time-consuming. Therefore, in this study, a multiplex polymerase chain reaction (PCR) using TaqMan Probe was designed and validated to be able to detect HLA-A*31:01 and HLA-B*15:02. In comparison with Luminex-SSO/SBT/SSB, the multiplex PCR assay for detection of HLA-A*31:01 and HLA-B*15:02 had a perfect agreement in the validation group of 125 samples. The method was able to detect the target genes at the DNA concentration of 0.037 ng/μL. The unit cost of this assay is less than $5 USD with total time of 110 minutes. © 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  20. Distribution of the type III DNA methyltransferases modA, modB and modD among Neisseria meningitidis genotypes: implications for gene regulation and virulence.

    Science.gov (United States)

    Tan, Aimee; Hill, Dorothea M C; Harrison, Odile B; Srikhanta, Yogitha N; Jennings, Michael P; Maiden, Martin C J; Seib, Kate L

    2016-02-12

    Neisseria meningitidis is a human-specific bacterium that varies in invasive potential. All meningococci are carried in the nasopharynx, and most genotypes are very infrequently associated with invasive meningococcal disease; however, those belonging to the 'hyperinvasive lineages' are more frequently associated with sepsis or meningitis. Genome content is highly conserved between carriage and disease isolates, and differential gene expression has been proposed as a major determinant of the hyperinvasive phenotype. Three phase variable DNA methyltransferases (ModA, ModB and ModD), which mediate epigenetic regulation of distinct phase variable regulons (phasevarions), have been identified in N. meningitidis. Each mod gene has distinct alleles, defined by their Mod DNA recognition domain, and these target and methylate different DNA sequences, thereby regulating distinct gene sets. Here 211 meningococcal carriage and >1,400 disease isolates were surveyed for the distribution of meningococcal mod alleles. While modA11-12 and modB1-2 were found in most isolates, rarer alleles (e.g., modA15, modB4, modD1-6) were specific to particular genotypes as defined by clonal complex. This suggests that phase variable Mod proteins may be associated with distinct phenotypes and hence invasive potential of N. meningitidis strains.

  1. Influence of oxygen on asexual blood cycle and susceptibility of Plasmodium falciparum to chloroquine: requirement of a standardized in vitro assay

    Directory of Open Access Journals (Sweden)

    Minodier Philippe

    2007-04-01

    Full Text Available Abstract Objective The main objective of this study was to assess the influence of gas mixtures on in vitro Plasmodium falciparum growth and 50% inhibitory concentration (IC50 for chloroquine. Methods The study was performed between February 2004 and December 2005. 136 Plasmodium falciparum isolates were used to evaluate gas mixtures effect on IC50 for chloroquine by isotopic microtest. The oxygen effect on asexual blood cycle of 3D7 and W2 clones was determined by thin blood smears examination and tritiated hypoxanthine uptake. Results From 5% O2 to 21% O2 conditions, no parasiticide effect of O2 concentration was observed in vitro on the clones 3D7 and W2. A parasitostatic effect was observed during the exposure of mature trophozoïtes and schizonts at 21% O2 with an increase in the length of schizogony. The chloroquine IC50 at 10% O2 were significantly higher than those at 21% O2, means of 173.5 nM and 121.5 nM respectively (p in vitro resistant to chloroquine (IC50 > 100 nM at 10% O2, 17 were sensitive to chloroquine (IC50 2. Conclusion Based on these results, laboratories should use the same gas mixture to realize isotopic microtest. Further studies on comparison of isotopic and non-isotopic assays are needed to establish a standardized in vitro assay protocol to survey malaria drug resistance.

  2. Pitfalls of using 1,1-diphenyl-2-picrylhydrazyl (DPPH) assay to assess the radical scavenging activity of peptides: Its susceptibility to interference and low reactivity towards peptides.

    Science.gov (United States)

    Zheng, Lin; Lin, Lianzhu; Su, Guowan; Zhao, Qiangzhong; Zhao, Mouming

    2015-10-01

    DPPH assay is widely used to evaluate the radical scavenging activities of peptides. Effects of pH and buffers on the stability of DPPH• and its reduced product (DPPHH) in the ethanol-buffer solution were investigated in this study and the reactivity of DPPH• towards several dipeptides was compared to that of 2,2-azino-bis-(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS• + ) and the peroxyl radicals in oxygen radical absorbance capacity (ORAC) assay. Results showed that the deprotonation of DPPHH under basic condition could interfere with the spectrophotometric measurement at 515-525nm. It was suggested that the reaction mixture be maintained at a final pH range of 5.0-6.5 in 1:1 ethanol-acetate/citrate buffer medium when evaluating the activities of peptides. Additionally, among tested dipeptides, only Cys-containing dipeptides displayed DPPH• scavenging activity with 0.14-0.28μmol TE (Trolox equivalent)/μmol, while Tyr/Trp-containing dipeptides with high reactivity towards ABTS• + and peroxyl radicals were inert to DPPH• with TE values less than 0.02. Copyright © 2015 Elsevier Ltd. All rights reserved.

  3. RELAP5/MOD2 code assessment

    International Nuclear Information System (INIS)

    Nithianandan, C.K.; Shah, N.H.; Schomaker, R.J.; Miller, F.R.

    1985-01-01

    Babcock and Wilcox (B and W) has been working with the code developers at EG and G and the US Nuclear Regulatory Commission in assessing the RELAP5/MOD2 computer code for the past year by simulating selected separate-effects tests. The purpose of this assessment has been to evaluate the code for use in MIST (Ref. 2) and OTIS integral system tests simulations and in the prediction of pressurized water reactor transients. B and W evaluated various versions of the code and made recommendations to improve code performance. As a result, the currently released version (cycle 36.1) has been improved considerably over earlier versions. However, further refinements to some of the constitutive models may still be needed to further improve the predictive capability of RELAP5/MOD2. The following versions of the code were evaluated. (1) RELAP/MOD2/Cycle 22 - first released version; (2) YELAP5/Cycle 32 - EG and G test version of RELAP5/MOD2/Cycle 32; (3) RELAP5/MOD2/Cycle 36 - frozen cycle for international code assessment; (4) updates to cycle 36 based on recommendations developed by B and W during the simulation of a Massachusetts Institute of Technology (MIT) pressurizer test; and (5) cycle 36.1 updates received from EG and G

  4. RELAP5/MOD2 code assessment

    Energy Technology Data Exchange (ETDEWEB)

    Nithianandan, C.K.; Shah, N.H.; Schomaker, R.J.; Miller, F.R.

    1985-11-01

    Babcock and Wilcox (B and W) has been working with the code developers at EG and G and the US Nuclear Regulatory Commission in assessing the RELAP5/MOD2 computer code for the past year by simulating selected separate-effects tests. The purpose of this assessment has been to evaluate the code for use in MIST (Ref. 2) and OTIS integral system tests simulations and in the prediction of pressurized water reactor transients. B and W evaluated various versions of the code and made recommendations to improve code performance. As a result, the currently released version (cycle 36.1) has been improved considerably over earlier versions. However, further refinements to some of the constitutive models may still be needed to further improve the predictive capability of RELAP5/MOD2. The following versions of the code were evaluated. (1) RELAP/MOD2/Cycle 22 - first released version; (2) YELAP5/Cycle 32 - EG and G test version of RELAP5/MOD2/Cycle 32; (3) RELAP5/MOD2/Cycle 36 - frozen cycle for international code assessment; (4) updates to cycle 36 based on recommendations developed by B and W during the simulation of a Massachusetts Institute of Technology (MIT) pressurizer test; and (5) cycle 36.1 updates received from EG and G.

  5. RELAP5/MOD3 code coupling model

    International Nuclear Information System (INIS)

    Martin, R.P.; Johnsen, G.W.

    1994-01-01

    A new capability has been incorporated into RELAP5/MOD3 that enables the coupling of RELAP5/MOD3 to other computer codes. The new capability has been designed to support analysis of the new advanced reactor concepts. Its user features rely solely on new RELAP5 open-quotes styledclose quotes input and the Parallel Virtual Machine (PVM) software, which facilitates process management and distributed communication of multiprocess problems. RELAP5/MOD3 manages the input processing, communication instruction, process synchronization, and its own send and receive data processing. The flexible capability requires that an explicit coupling be established, which updates boundary conditions at discrete time intervals. Two test cases are presented that demonstrate the functionality, applicability, and issues involving use of this capability

  6. CORCON-MOD1 modelling improvements

    International Nuclear Information System (INIS)

    Corradini, M.L.; Gonzales, F.G.; Vandervort, C.L.

    1986-01-01

    Given the unlikely occurrence of a severe accident in a light water reactor (LWR), the core may melt and slump into the reactor cavity below the reactor vessel. The interaction of the molten core with exposed concrete (a molten-core-concrete-interaction, MCCI) causes copious gas production which influences further heat transfer and concrete attack and may threaten containment integrity. In this paper the authors focus on the low-temperature phase of the MCCI where the molten pool is partially solidified, but is still capable of attacking concrete. The authors have developed some improved phenomenological models for pool freezing and molten core-coolant heat transfer and have incorporated them into the CORCON-MOD1 computer program. In the paper the authors compare the UW-CORCON/MOD1 calculations to CORCON/MOD2 and WECHSL results as well as the BETA experiments which are being conducted in Germany

  7. The RELAP5/MOD3 computer code

    International Nuclear Information System (INIS)

    Weaver, W.L.

    1989-01-01

    RELAP5/MOD3 is a pressurized water reactor (PWR) system analysis code being developed jointly by the U.S. Nuclear Regulatory Commission (USNRC) and a consortium consisting of several of the countries and domestic organizations that are members of the International Code Assessment and Applications Program (ICAP). The mission of the RELAP5/MOD3 code development program is to develop a code version suitable for the analysis of all transients and postulated accidents in PWR systems including both large and small break loss of coolant accidents (LOCA's) as well as the full range of operational transients. Although the emphasis of the RELAP5/MOD3 development is on large break LOCA, improvements to existing code models, based on the results of assessments against small break LOCA and operational transient test data, are also being made. This paper discusses the new code models as well as improvements to existing models. 13 refs., 6 figs., 1 tab

  8. Lov om forbud mod forskelsbehandling med kommentarer

    DEFF Research Database (Denmark)

    Nielsen, Ruth

    Bogen er en kommentar til lov om forbud mod forskelsbehandling på arbejdsmarkedet, der forbyder forskelsbehandling på arbejdsmarkedet på grund af race, hudfarve, alder, religion, tro, politisk tilhørsforhold, seksuel orientering, handicap, national, social og etnisk oprindelse. Denne lovkommentar...

  9. Qualification of the AUTOBUS Mod. 2 Code

    International Nuclear Information System (INIS)

    Ciarniello, U.; Peroni, P.

    1988-01-01

    The paper presents the qualification of AUTOBUS MOD.2 code. After a brief description of the code itself, all the critical experiments simulated by the code are illustrated to prove the accuracy of criticality calculation and power distribution. An interpretation of the results and a conclusion close this presentation

  10. Identitetskonstruktion ved orientering mod medlemsbundne aktiviteter

    DEFF Research Database (Denmark)

    Stæhr, Andreas

    2010-01-01

    identiteter ved at orientere sig mod medlemsbundne aktiviteter. Det interessante i denne forbindelse er, at jeg med mine data viser, at man øjensynligt ikke behøver at eksplicitere de medlemskategorier, vi caster hinanden i, for at opnå en forståelse af, hvilke kategorier der gøres relevante i interaktionen...

  11. Udvikling af vaccine mod dyr tarmsygdom

    DEFF Research Database (Denmark)

    Jungersen, Gregers

    2012-01-01

    DTU Veterinærinstituttet arbejder på at udvikle en effektiv vaccine mod bakterien Lawsonia intracellularis, der forårsager den antibiotikakrævende tarmsygdom proliferativ enteritis. Bakterien driller i laboratoriet, så forskerne må finde innovative veje til vaccinen. Målet er, at vaccinens...

  12. Vold mod børn

    DEFF Research Database (Denmark)

    Christensen, Else; Agerlund Sloth Larsen, Dorthe

    er der gennemført en interviewundersøgelse, hvor i alt 14 sagsbehandlere fra fire forskellige store kommuner er interviewet om deres erfaringer fra sager med (mistanke om) fysisk vold mod børn, om hvordan sådanne sager sædvanligvis starter i socialforvaltningen, om undersøgelsesforløbet, om...

  13. Kyllinger har effektivt immunforsvar mod herpes

    DEFF Research Database (Denmark)

    Buchmann, Kurt

    2008-01-01

    Forskere ved Københavns Universitet, Fakultet for Biovidenskab har studeret kyllingens MHC molekyler og kan derigennem forklare hvorfor en særlig stamme indenfor denne art er modstandsdygtige mod en særlig herpesvirus. Udgivelsesdato: 18. januar 2008...

  14. Københavnerskolen opruster mod nye sikkerhedstrusler

    DEFF Research Database (Denmark)

    Wæver, Ole

    2013-01-01

    Sikkerhedspolitik er en form for politik, der kan og gør helt specielle ting. Med begrebet ”sikkerhedsliggørelse” (securitization) har den såkaldte ”Københavnerskole” opbygget en indflydelsesrig teori centreret om, hvordan forsvar mod en eksistentiel trussel retfærdiggør brug af ekstraordinære...

  15. Automotive Stirling engine: Mod II design report

    Energy Technology Data Exchange (ETDEWEB)

    Nightingale, N.P.

    1986-10-01

    The design of an automotive Stirling engine that achieves the superior fuel economy potential of the Stirling cycle is described. As the culmination of a 9-yr development program, this engine, designated the Mod II, also nullifies arguments that Stirling engines are heavy, expensive, unreliable, and demonstrate poor performance. Installed in a General Motors 1985 Chevrolet Celebrity car, this engine has a predicted combined fuel economy on unleaded gasoline of 17.5 km/L (41 mi/gal) - a value 50% above the current vehicle fleet average. The Mod II Stirling engine is a four-cylinder V-drive design with a single crankshaft. The engine is also equipped with all the controls and auxiliaries necessary for automotive operation. 35 figs.

  16. Printemps de la modélisation

    Directory of Open Access Journals (Sweden)

    Denise Pumain

    2000-03-01

    Full Text Available La formalisation, mathématique ou informatique, était d'abord comprise comme une contrainte qui oblige à expliciter une représentation de ce que l'on étudie. Cela aussi bien par les modélisateurs convaincus et besogneux, que par ceux qui, récupérant au passage le prestige du vocable, ont baptisé "modèles" d'incertaines représentations à peine ou pas du tout formalisées. Aujourd'hui, la formalisation peut être aussi une liberté. Les nouvelles représentations par des objets informatiques ont ac...

  17. RELAP5/MOD3 AP600 problems

    International Nuclear Information System (INIS)

    Riemke, R.A.

    1993-01-01

    RELAP5/MOD3 is a reactor systems analysis code that has been developed jointly by the US Nuclear Regulatory Commission (USNRC) and a consortium consisting of several of the countries and domestic organizations that were members of the International Code Assessment and Applications Program (ICAP). The code is currently being used to simulate transients for the next generation of advanced light water reactors (ALWR's). One particular reactor design is the Westinghouse AP600 pressurized water reactor (PWR), which consists of two hot legs and four cold legs as well as passive emergency core cooling (ECC) systems. Initial calculations with RELAP5/MOD3 indicated that the code was not as robust as RELAP5/MOD2.5 with regard to AP600 calculations. Recent modifications in the areas of condensation wall heat transfer, interfacial heat transfer in the presence of noncondensibles, bubbly flow interfacial heat transfer, and time smoothing of both interfacial drag and interfacial heat transfer have improved the robustness, although more reliability is needed

  18. RELAP5/MOD2 assessment simulation of semiscale MOD-2C test S-NH-3

    Energy Technology Data Exchange (ETDEWEB)

    Megahed, M M

    1987-10-01

    This report documents an evaluation of the RELAP5/MOD2/Cycle 36.05 thermal hydraulic computer code for a simulation of a small-break loss-of-coolant accident transient (SBLOCA). The experimental data base for the evaluation is the results of Test S-NH-3 performed in the Semiscale MOD-2C test facility. The test modeled a 0.5% SBLOCA with an accompanying failure of the high-pressure injection emergency core cooling system. The test facility and RELAP5/MOD2 model used in the calculations are described. Evaluations of the accuracy of the calculations are presented in the form of comparisons of measured and calculated histories of selected parameters associated with the primary and secondary systems. A conclusion was reached that the code is capable of making SBLOCA calculations efficiently. However, some of the SBLOCA-related phenomena were not properly predicted by the code, suggesting a need for code improvement.

  19. Orbit Representations from Linear mod 1 Transformations

    Directory of Open Access Journals (Sweden)

    Carlos Correia Ramos

    2012-05-01

    Full Text Available We show that every point $x_0in [0,1]$ carries a representationof a $C^*$-algebra that encodes the orbit structure of thelinear mod 1 interval map $f_{eta,alpha}(x=eta x +alpha$. Such $C^*$-algebra is generated by partial isometries arising from the subintervals of monotonicity of the underlying map $f_{eta,alpha}$. Then we prove that such representation is irreducible. Moreover two such of representations are unitarily equivalent if and only if the points belong to the same generalized orbit, for every $alphain [0,1[$ and $etageq 1$.

  20. An analysis of the binding of repressor protein ModE to modABCD (molybdate transport) operator/promoter DNA of Escherichia coli.

    Science.gov (United States)

    Grunden, A M; Self, W T; Villain, M; Blalock, J E; Shanmugam, K T

    1999-08-20

    Expression of the modABCD operon in Escherichia coli, which codes for a molybdate-specific transporter, is repressed by ModE in vivo in a molybdate-dependent fashion. In vitro DNase I-footprinting experiments identified three distinct regions of protection by ModE-molybdate on the modA operator/promoter DNA, GTTATATT (-15 to -8; region 1), GCCTACAT (-4 to +4; region 2), and GTTACAT (+8 to +14; region 3). Within the three regions of the protected DNA, a pentamer sequence, TAYAT (Y = C or T), can be identified. DNA-electrophoretic mobility experiments showed that the protected regions 1 and 2 are essential for binding of ModE-molybdate to DNA, whereas the protected region 3 increases the affinity of the DNA to the repressor. The stoichiometry of this interaction was found to be two ModE-molybdate per modA operator DNA. ModE-molybdate at 5 nM completely protected the modABCD operator/promoter DNA from DNase I-catalyzed hydrolysis, whereas ModE alone failed to protect the DNA even at 100 nM. The apparent K(d) for the interaction between the modA operator DNA and ModE-molybdate was 0.3 nM, and the K(d) increased to 8 nM in the absence of molybdate. Among the various oxyanions tested, only tungstate replaced molybdate in the repression of modA by ModE, but the affinity of ModE-tungstate for modABCD operator DNA was 6 times lower than with ModE-molybdate. A mutant ModE(T125I) protein, which repressed modA-lac even in the absence of molybdate, protected the same region of modA operator DNA in the absence of molybdate. The apparent K(d) for the interaction between modA operator DNA and ModE(T125I) was 3 nM in the presence of molybdate and 4 nM without molybdate. The binding of molybdate to ModE resulted in a decrease in fluorescence emission, indicating a conformational change of the protein upon molybdate binding. The fluorescence emission spectra of mutant ModE proteins, ModE(T125I) and ModE(Q216*), were unaffected by molybdate. The molybdate-independent mutant Mod

  1. Waste removal sequencing using ProdMod

    International Nuclear Information System (INIS)

    Paul, P.K.; Gregory, M.V.; Davis, N.R.; Brooke, J.N.

    1996-01-01

    The Savannah River Site (SRS) is starting to solidify its accumulated high-level radioactive waste into borosilicate glass in stainless steel canisters for eventual permanent storage. The in-tank precipitation process (ITP) and extended sludge processing (ESP) are two key operations in the waste processing complex. The supernate and dissolved salt from the waste storage tanks are transferred to the ITP process tank where the solution is decontaminated in batch processes. Soluble radioactive cesium is precipitated with sodium tetraphenylborate and strontium, uranium, and plutonium are adsorbed on monosodium titanate. The precipitate and adsorbent solids, which now contain the radionuclides, are concentrated using crossflow filters. The concentrated solids are sent to the high-level waste vitrification process. The decontaminated salt solution is sent to the low-level waste solidification process to form cement grout. In parallel with the precipitate operations, insoluble sludges that settled originally to the bottom of the waste tanks are reslurried and sent to ESP to undergo washing to reduce soluble salt content and aluminum dissolution, if required. In the vitrification process in the Defense Waste Processing Facility (DWPF), the concentrated precipitate from the ITP is mixed with the washed sludge from ESP and glass frit in proportion to form a stable borosilicate glass. A novel and fast-running Production Planning Model (ProdMod) has been developed to simulate the waste processing operation. This paper describes the application of ProdMod in sequencing the ITP batches and scheduling the ESP batches

  2. Beskyttelse mod passiv rygning i botilbud

    DEFF Research Database (Denmark)

    Faber, Louise

    2018-01-01

    ikke tidligere har været forbud. Denne problemstilling er aktuelt lige nu i forhold til passiv rygning, der tolereres mindre end tidligere. I denne artikel undersøges, i hvilket omfang der er mulighed for, at udstede rygeforbud på botilbud, når formålet med forbuddet er at beskytte andre beboere mod...... udsættes for passiv rygning på grund af indtrængen af røg fra en anden beboers bolig. Konkret kan der derfor opstå situationer, hvor en beboer alligevel krænkes i medfør af EMRK art. 8, stk. 1. For at opfylde beskyttelseskravet i botilbud foreslår forfatteren en lovændring, der giver hjemmel til indførelse......Myndigheder har pligt til at beskytte individer mod ufrivillig sundhedsskadelig påvirkning i medfør af EMRK art. 8, stk. 1. På områder, hvor individets tolerancetærskel for sundhedsskadelig påvirkning bliver mindre end tidligere, kan der opstå behov for at udstede forbud i situationer, hvor der...

  3. The alcator C-MOD control system

    International Nuclear Information System (INIS)

    Bosco, J.; Fairfax, S.

    1992-01-01

    The Alcator C-MOD experiment includes over 30 engineering and diagnostic subsystems. The control system hardware and software is a mixture of custom and commercial products which includes sensors, signal conditioners, hard-wired controls, programmable logic controllers, displays, a hybrid analog/digital computer, networked personal computers, and networked VAX workstations. This paper describes the computer-based portions of the control system. The control system coordinates all C-MOD systems including power, vacuum, heating and cooling, access control, plasma shape and position control, and diagnostics. Programmable logic controllers (PLC's) are located near each subsystem. The control room is isolated by fiber optics. Functions that are essential to personnel or equipment safety (e.g. access control) are implemented in hardwired logic and monitored but not controlled by the PLC's. The initial configuration will include over 25 Allen-Bradley PLC-5 units. The PLCs in each subsystem are connected to personal computers (PC's) in the control room. The PC's provide graphical displays and operator interface. The Pc's are networked and share process data with each other and with a master control console and a large mimic panel

  4. Molybdate binding by ModA, the periplasmic component of the Escherichia coli mod molybdate transport system.

    Science.gov (United States)

    Imperial, J; Hadi, M; Amy, N K

    1998-03-13

    ModA, the periplasmic-binding protein of the Escherichia coli mod transport system was overexpressed and purified. Binding of molybdate and tungstate to ModA was found to modify the UV absorption and fluorescence emission spectra of the protein. Titration of these changes showed that ModA binds molybdate and tungstate in a 1:1 molar ratio. ModA showed an intrinsic fluorescence emission spectrum attributable to its three tryptophanyl residues. Molybdate binding caused a conformational change in the protein characterized by: (i) a shift of tryptophanyl groups to a more hydrophobic environment; (ii) a quenching (at pH 5.0) or enhancement (at pH 7.8) of fluorescence; and (iii) a higher availability of tryptophanyl groups to the polar quencher acrylamide. The tight binding of molybdate did not allow an accurate estimation of the binding constants by these indirect methods. An isotopic binding method with 99MoO42- was used for accurate determination of KD (20 nM) and stoichiometry (1:1 molar ratio). ModA bound tungstate with approximately the same affinity, but did not bind sulfate or phosphate. These KDs are 150- to 250-fold lower than those previously reported, and compatible with the high molybdate transport affinity of the mod system. The affinity of ModA for molybdate was also determined in vivo and found to be similar to that determined in vitro. Copyright 1998 Elsevier Science B.V.

  5. Functional characterization of the Bradyrhizobium japonicum modA and modB genes involved in molybdenum transport.

    Science.gov (United States)

    Delgado, María J; Tresierra-Ayala, Alvaro; Talbi, Chouhra; Bedmar, Eulogio J

    2006-01-01

    A modABC gene cluster that encodes an ABC-type, high-affinity molybdate transporter from Bradyrhizobium japonicum has been isolated and characterized. B. japonicum modA and modB mutant strains were unable to grow aerobically or anaerobically with nitrate as nitrogen source or as respiratory substrate, respectively, and lacked nitrate reductase activity. The nitrogen-fixing ability of the mod mutants in symbiotic association with soybean plants grown in a Mo-deficient mineral solution was severely impaired. Addition of molybdate to the bacterial growth medium or to the plant mineral solution fully restored the wild-type phenotype. Because the amount of molybdate required for suppression of the mutant phenotype either under free-living or under symbiotic conditions was dependent on sulphate concentration, it is likely that a sulphate transporter is also involved in Mo uptake in B. japonicum. The promoter region of the modABC genes has been characterized by primer extension. Reverse transcription and expression of a transcriptional fusion, P(modA)-lacZ, was detected only in a B. japonicum modA mutant grown in a medium without molybdate supplementation. These findings indicate that transcription of the B. japonicum modABC genes is repressed by molybdate.

  6. Enzyme assays.

    Science.gov (United States)

    Brodelius, P E

    1991-02-01

    The past year or so has seen the development of new enzyme assays, as well as the improvement of existing ones. Assays are becoming more rapid and sensitive as a result of modifications such as amplification of the enzyme product(s). Recombinant DNA technology is now being recognized as a particularly useful tool in the search for improved assay systems.

  7. RELAP5/MOD2 models and correlations

    International Nuclear Information System (INIS)

    Dimenna, R.A.; Larson, J.R.; Johnson, R.W.; Larson, T.K.; Miller, C.S.; Streit, J.E.; Hanson, R.G.; Kiser, D.M.

    1988-08-01

    A review of the RELAP5/MOD2 computer code has been performed to assess the basis for the models and correlations comprising the code. The review has included verification of the original data base, including thermodynamic, thermal-hydraulic, and geothermal conditions; simplifying assumptions in implementation or application; and accuracy of implementation compared to documented descriptions of each of the models. An effort has been made to provide the reader with an understanding of what is in the code and why it is there and to provide enough information that an analyst can assess the impact of the correlation or model on the ability of the code to represent the physics of a reactor transient. Where assessment of the implemented versions of the models or correlations has been accomplished and published, the assessment results have been included

  8. Overexpression, purification, and partial characterization of ADP-ribosyltransferases modA and modB of bacteriophage T4.

    Science.gov (United States)

    Tiemann, B; Depping, R; Rüger, W

    1999-01-01

    There is increasing experimental evidence that ADP-ribosylation of host proteins is an important means to regulate gene expression of bacteriophage T4. Surprisingly, this phage codes for three different ADP-ribosyltransferases, gene products Alt, ModA, and ModB, modifying partially overlapping sets of host proteins. While gene product Alt already has been isolated as a recombinant protein and its action on host RNA polymerases and transcription regulation have been studied, the nucleotide sequences of the two mod genes was published only recently. Their mode of action in the course of the infection cycle and the consequences of the ADP-ribosylations catalyzed by these enzymes remain to be investigated. Here we describe the cloning of the genes, the overexpression, purification, and partial characterization of ADP-ribosyltransferases ModA and ModB. Both proteins seem to act independently, and the ADP-ribosyl moieties are transferred to different sets of host proteins. While gene product ModA, similarly to the Alt protein, acts also on the alpha-subunit of host RNA polymerase, the ModB activity serves another set of proteins, one of which was identified as the S1 protein associated with the 30S subunit of the E. coli ribosomes.

  9. RELAP5/MOD2: for PWR transient analysis

    International Nuclear Information System (INIS)

    Ransom, V.H.

    1983-01-01

    RELAP5 is a light water reactor system transient simulation code for use in nuclear plant safety analysis. Development of a new version, RELAP5/MOD2, has been completed and will be released to the United States Nuclear Regulatory Commission during September of 1983. The new and improved modeling capability of RELAP5/MOD2 is described and some developmental assessment results are presented. The future plans for extension to severe accident modeling are briefly discussed

  10. Vaccine mod halthed testes i besætning

    DEFF Research Database (Denmark)

    Lauritsen, Klara Tølbøll

    2012-01-01

    Ny vaccine mod ledbetændelse forårsaget af Mycoplasma hyosynoviae testes nu hos 200 svin i en problembesætning. Håbet er færre halte svin og en nedbringelse af antibiotikaforbruget.......Ny vaccine mod ledbetændelse forårsaget af Mycoplasma hyosynoviae testes nu hos 200 svin i en problembesætning. Håbet er færre halte svin og en nedbringelse af antibiotikaforbruget....

  11. Gas jet disruption mitigation studies on Alcator C-Mod

    International Nuclear Information System (INIS)

    Granetz, R.; Whyte, D.G.; Izzo, V.A.; Biewer, T.; Reinke, M.L.; Terry, J.; Bader, A.; Bakhtiari, M.; Jernigan, T.; Wurden, G.

    2006-01-01

    Damaging effects of disruptions are a major concern for Alcator C-Mod, ITER and future tokamak reactors. High-pressure noble gas jet injection is a mitigation technique which potentially satisfies the operational requirements of fast response time and reliability, while still being benign to subsequent discharges. Disruption mitigation experiments using an optimized gas jet injection system are being carried out on Alcator C-Mod to study the physics of gas jet penetration into high pressure plasmas, as well as the ability of the gas jet impurities to convert plasma energy into radiation on timescales consistent with C-Mod's fast quench times, and to reduce halo currents given C-Mod's high-current density. The dependence of impurity penetration and effectiveness on noble gas species (He, Ne, Ar, Kr) is also being studied. It is found that the high-pressure neutral gas jet does not penetrate deeply into the C-Mod plasma, and yet prompt core thermal quenches are observed on all gas jet shots. 3D MHD modelling of the disruption physics with NIMROD shows that edge cooling of the plasma triggers fast growing tearing modes which rapidly produce a stochastic region in the core of the plasma and loss of thermal energy. This may explain the apparent effectiveness of the gas jet in C-Mod despite its limited penetration. The higher-Z gases (Ne, Ar, Kr) also proved effective at reducing halo currents and decreasing thermal deposition to the divertor surfaces. In addition, noble gas jet injection proved to be benign for plasma operation with C-Mod's metal (Mo) wall, actually improving the reliability of the startup in the following discharge

  12. Correlation of Etest and Neo-Sensitabs diffusion assays on Mueller-Hinton-methylene blue agar with broth microdilution reference method (CLSI-M27-A2) for testing susceptibilities of Cryptococcus neoformans to amphotericin B and fluconazole.

    Science.gov (United States)

    Ochiuzzi, Maria Eugenia; Santiso, Gabriela María; Arechavala, Alicia Irene

    2010-09-01

    Cryptococcus neoformans causes disseminated infection in 7-8% of HIV positive patients admitted to Hospital F. J. Muñiz in Buenos Aires. Meningoencephalitis is the most frequent clinical manifestation and is one of the main causes of death in those patients with AIDS. The standard treatment for this mycosis consists of amphotericin B followed by fluconazole until two successive cultures of CFS are negative. Although resistance to these drugs is infrequent, minimal inhibitory concentrations (MIC) of some antifungals can be high. Since it is important to know the susceptibility levels of this fungus to the antifungal drugs usually employed in our institution, we analyzed the susceptibility test results of C. neoformans with two diffusion methods (Etest and NeoSensitabs tablets) employing Mueller-Hinton agar with 2% glucose and 0.5 microg/ml methylene blue. These results were compared with MICs obtained through the use of the broth microdilution reference method (CLSI). Results showed good agreement with the reference method, with no very major errors and only two major errors for fluconazole using NeoSensitabs tablets. For all the above mentioned, we confirm the usefulness of Mueller-Hinton agar to evaluate C. neoformans susceptibility to amphotericin B and fluconazole with these two agar diffusion methods.

  13. RELAP5/MOD2 assessment at Babcock and Wilcox

    International Nuclear Information System (INIS)

    Nithianandan, C.K.; Shah, N.H.; Schomaker, R.J.; Turk, C.

    1986-01-01

    Babcock and Wilcox (B and W) has been working with the code developers at EG and G Idaho, Inc. and the NRC assessing the RELAP5/MOD2 computer code by simulating selected separate effects tests. The purpose of this B and W Owners Group-sponsored assessment was to evaluate RELAP5/MOD2 for use in design calculations for the MIST and OTIS integral system tests and in predicting pressurized water reactor (PWR) transients. B and W evaluated various versions of the code and made recommendations to improve code performance. As a result, the currently released version (Cycle 36.1) has been improved considerably over earlier versions. However, further refinements to some of the constitutive models may still be needed to further improve specific predictive capabilities of RELAP5/MOD2

  14. NetMOD Version 2.0 Parameters

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-08-01

    NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydroacoustic and infrasonic networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This document describes the parameters that are used to configure the NetMOD tool and the input and output parameters that make up the simulation definitions.

  15. Brazilian Irradiation Project: CAFE-MOD1 validation experimental program

    International Nuclear Information System (INIS)

    Mattos, Joao Roberto Loureiro de; Costa, Antonio Carlos L. da; Esteves, Fernando Avelar; Dias, Marcio Soares

    1999-01-01

    The Brazilian Irradiation Project whose purpose is to provide Brazil with a minimal structure to qualify the design, fabrication and quality procedures of nuclear fuels, consists of three main facilities: IEA-R1 reactor of IPEN-CNEN/SP, CAFE-MOD1 irradiation device and a unit of hot cells. The CAFE-MOD1 is based on concepts successfully used for more than 20 years in the main nuclear institutes around the world. Despite these concepts are already proved it should be adapted to each reactor condition. For this purpose, there is an ongoing experimental program aiming at the certification of the criteria and operational limits of the CAFE-MOD1 in order to get the allowance for its installation at the IEA-R1 reactor. (author)

  16. Plasma biomarkers of SIRS and MODS associated with canine babesiosis.

    Science.gov (United States)

    Kuleš, J; de Torre-Minguela, C; Barić Rafaj, R; Gotić, J; Nižić, P; Ceron, J J; Mrljak, V

    2016-04-01

    Canine babesiosis is a tick-borne disease caused by the haemoprotozoan parasites of the genus Babesia. Early detection of systemic inflammatory response syndrome (SIRS) and multiple organ dysfunction syndrome (MODS) is of major importance in clinical practice for providing information about severity and outcomes of the disease and therapy. Plasma samples were taken at admission from five dogs with uncomplicated babesiosis caused by B. canis canis, five dogs with babesiosis and SIRS, five dogs with babesiosis and MODS, and five healthy dogs. After two-dimensional electrophoresis and capillary reversed - phase liquid chromatography coupled online with tandem mass spectrometry, 68 differentially expressed spots with level of significance PSIRS in babesiosis was characterised by increases in paraoxonase 1 and apoA-I, whereas MODS with decrease of complement inhibitors leading to prolonged complement activation and decrease of vitamin D binding protein due to haemolysis and activation of the coagulation cascade. Copyright © 2016 Elsevier Ltd. All rights reserved.

  17. Hormone assay

    International Nuclear Information System (INIS)

    Eisentraut, A.M.

    1977-01-01

    An improved radioimmunoassay is described for measuring total triiodothyronine or total thyroxine levels in a sample of serum containing free endogenous thyroid hormone and endogenous thyroid hormone bound to thyroid hormone binding protein. The thyroid hormone is released from the protein by adding hydrochloric acid to the serum. The pH of the separated thyroid hormone and thyroid hormone binding protein is raised in the absence of a blocking agent without interference from the endogenous protein. 125 I-labelled thyroid hormone and thyroid hormone antibodies are added to the mixture, allowing the labelled and unlabelled thyroid hormone and the thyroid hormone antibody to bind competitively. This results in free thyroid hormone being separated from antibody bound thyroid hormone and thus the unknown quantity of thyroid hormone may be determined. A thyroid hormone test assay kit is described for this radioimmunoassay. It provides a 'single tube' assay which does not require blocking agents for endogenous protein interference nor an external solid phase sorption step for the separation of bound and free hormone after the competitive binding step; it also requires a minimum number of manipulative steps. Examples of the assay are given to illustrate the reproducibility, linearity and specificity of the assay. (UK)

  18. Københavns Kommunes indsats mod social dumping - målopfyldelsesevaluering

    DEFF Research Database (Denmark)

    Baadsgaard, Kelvin; Jørgensen, Henning

    2016-01-01

    Evaluering af, om de politiske intentioner med indsats mod social dumping i Københavns Kommune er blevet indfriet......Evaluering af, om de politiske intentioner med indsats mod social dumping i Københavns Kommune er blevet indfriet...

  19. Novel Tetra-Primer ARMS-PCR Assays for Thiopurine Intolerance Susceptibility Mutations NUDT15 c.415C>T and TPMT c.719A>G (TPMT*3C in East Asians

    Directory of Open Access Journals (Sweden)

    Chi-Chun Ho

    2017-10-01

    Full Text Available Thiopurines are clinically useful in the management of diverse immunological and malignant conditions. Nevertheless, these purine analogues can cause lethal myelosuppression, which may be prevented by prospective testing for variants in the thiopurine S-methyltransferase (TPMT and, in East Asians, Nudix hydrolase 15 (NUDT15 genes. Two single-tube, tetra-primer amplification refractory mutation system polymerase chain reaction (ARMS-PCR assays were developed to genotype the common loss-of-function variants NUDT15 c.415C>T (rs116855232 and TPMT*3C c.719A>G (rs1142345. In a group of 60 unselected patients, one and seven were found to be homozygous and heterozygous, respectively, for NUDT15 c.415C>T; one was found to be heterozygous for TPMT*3C c.719A>G. There was no non-specific amplification, and the genotypes were 100% concordant with Sanger sequencing. Limit-of-detection for both assays was below 1 ng of heterozygous template per reaction. Time- and cost-effective ARMS-PCR assays, suitable for genotyping East-Asian patients for thiopurine intolerance, were successfully developed and validated.

  20. Mod 1 ICS TI Report: ICS Conversion of a 140% HPGe Detector

    Energy Technology Data Exchange (ETDEWEB)

    Bounds, John Alan [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2016-07-05

    This report evaluates the Mod 1 ICS, an electrically cooled 140% HPGe detector. It is a custom version of the ORTEC Integrated Cooling System (ICS) modified to make it more practical for us to use in the field. Performance and operating characteristics of the Mod 1 ICS are documented, noting both pros and cons. The Mod 1 ICS is deemed a success. Recommendations for a Mod 2 ICS, a true field prototype, are provided.

  1. Power oscillation of the Mod-0 wind turbine

    Science.gov (United States)

    Seidel, R. C.

    1978-01-01

    The Mod-0 power has noise components with varying frequency patterns. Magnitudes reach more than forty percent power at the frequency of twice per rotor revolution. Analysis of a simple torsional model of the power train predicts less than half the observed magnitude and does not explain the shifting frequencies of the noise patterns.

  2. Heat loss tests for the lobi-mod2 facility

    International Nuclear Information System (INIS)

    Sanders, J.

    1986-01-01

    The results and analysis of the LOBI-MOD2 heat loss tests are presented in this report. The facility heat losses are evaluated at constant temperature from power balance and for a whole temperature range by a transient method. Heat losses of the individual loop components are determined by a combination of measurements and heat conduction calculations

  3. NetMOD Version 2.0 Mathematical Framework

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Young, Christopher J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Chael, Eric P. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-08-01

    NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydroacoustic and infrasonic networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probabilities of signal detection at each station and event detection across the network of stations can be computed given a detection threshold. The purpose of this document is to clearly and comprehensively present the mathematical framework used by NetMOD, the software package developed by Sandia National Laboratories to assess the monitoring capability of ground-based sensor networks. Many of the NetMOD equations used for simulations are inherited from the NetSim network capability assessment package developed in the late 1980s by SAIC (Sereno et al., 1990).

  4. Vold mod førskolebørn

    DEFF Research Database (Denmark)

    Oldrup, Helene; Lindstrøm, Maia; Korzen, Sara

    Denne rapport handler om praksis og barrierer for opsporing af og underretning om vold mod førskolebørn. Rapporten er baseret på 22 kvalitative interviews med fagfolk inden for dagpasning, sundhedsvæsen og det sociale system. Undersøgelsen viser bl.a., at en del af fagfolkene ofte tøver med at un...

  5. Apo and ligand-bound structures of ModA from the archaeon Methanosarcina acetivorans

    International Nuclear Information System (INIS)

    Chan, Sum; Giuroiu, Iulia; Chernishof, Irina; Sawaya, Michael R.; Chiang, Janet; Gunsalus, Robert P.; Arbing, Mark A.; Perry, L. Jeanne

    2010-01-01

    Crystal structures of ModA from M. acetivorans in the apo and ligand-bound conformations confirm domain rotation upon ligand binding. The trace-element oxyanion molybdate, which is required for the growth of many bacterial and archaeal species, is transported into the cell by an ATP-binding cassette (ABC) transporter superfamily uptake system called ModABC. ModABC consists of the ModA periplasmic solute-binding protein, the integral membrane-transport protein ModB and the ATP-binding and hydrolysis cassette protein ModC. In this study, X-ray crystal structures of ModA from the archaeon Methanosarcina acetivorans (MaModA) have been determined in the apoprotein conformation at 1.95 and 1.69 Å resolution and in the molybdate-bound conformation at 2.25 and 2.45 Å resolution. The overall domain structure of MaModA is similar to other ModA proteins in that it has a bilobal structure in which two mixed α/β domains are linked by a hinge region. The apo MaModA is the first unliganded archaeal ModA structure to be determined: it exhibits a deep cleft between the two domains and confirms that upon binding ligand one domain is rotated towards the other by a hinge-bending motion, which is consistent with the ‘Venus flytrap’ model seen for bacterial-type periplasmic binding proteins. In contrast to the bacterial ModA structures, which have tetrahedral coordination of their metal substrates, molybdate-bound MaModA employs octahedral coordination of its substrate like other archaeal ModA proteins

  6. Radioreceptor assays

    International Nuclear Information System (INIS)

    Lapka, R.

    1985-01-01

    Radioreceptor assay (RRA) is an analytical method using the specific interaction of some pharmaceuticals and endogenic substances (ligands) with specific receptors present in certin tissues of living organisms. RRA uses the principle of isotope dilution. The method is described in detail of the preparation of receptors, samples and radioligands, conditions of incubation, the separation of free and bound radioligand, and the mathematical evaluation of RRA. The sensitivity of RRA is measured in units to tens of pg. The specificity of RRA relates to a group of substances with similar pharmacological effect. RRA may be used for identifying neuroleptics, antidepressants, anxiolytics, ergot alkaloids, beta blockers, anticholinergic drugs, certain hormones and neuropeptides. (M.D.)

  7. Simulation, modélisation et décision en pratique

    CERN Document Server

    Rennard, Jean-Philippe; Duymedjian, Raffi

    2009-01-01

    Avec l'explosion de la puissance informatique, le grand public dispose désormais d'outils aptes à résoudre des problèmes complexes, auparavant hors de portée des non-spécialistes. Le tableur notamment est particulièrement adapté à la modélisation et à la simulation de nombre de problèmes quotidiens de décision. En parallèle, le décideur est confronté à un environnement en évolution rapide, où la décision éclairée est une condition de succès. Face à une avalanche de données, il est le plus souvent amené à sélection intuitivement celles qui sont susceptibles de l'aide à anticiper les conséquences de ses décisions. Cet ouvrage se propose de présenter les principale méthodes d'aide à la décision et d'en montrer la mise en oeuvre avec le tableur. D'une difficulté progressive, l'ouvrage introduit à la modélisation e à la simulation pour la décision avant de présenter les outils dédiés à différents types de problèmes (prévision, optimisation, théorie des jeux, arbres d...

  8. Apo and ligand-bound structures of ModA from the archaeon Methanosarcina acetivorans.

    Science.gov (United States)

    Chan, Sum; Giuroiu, Iulia; Chernishof, Irina; Sawaya, Michael R; Chiang, Janet; Gunsalus, Robert P; Arbing, Mark A; Perry, L Jeanne

    2010-03-01

    The trace-element oxyanion molybdate, which is required for the growth of many bacterial and archaeal species, is transported into the cell by an ATP-binding cassette (ABC) transporter superfamily uptake system called ModABC. ModABC consists of the ModA periplasmic solute-binding protein, the integral membrane-transport protein ModB and the ATP-binding and hydrolysis cassette protein ModC. In this study, X-ray crystal structures of ModA from the archaeon Methanosarcina acetivorans (MaModA) have been determined in the apoprotein conformation at 1.95 and 1.69 A resolution and in the molybdate-bound conformation at 2.25 and 2.45 A resolution. The overall domain structure of MaModA is similar to other ModA proteins in that it has a bilobal structure in which two mixed alpha/beta domains are linked by a hinge region. The apo MaModA is the first unliganded archaeal ModA structure to be determined: it exhibits a deep cleft between the two domains and confirms that upon binding ligand one domain is rotated towards the other by a hinge-bending motion, which is consistent with the 'Venus flytrap' model seen for bacterial-type periplasmic binding proteins. In contrast to the bacterial ModA structures, which have tetrahedral coordination of their metal substrates, molybdate-bound MaModA employs octahedral coordination of its substrate like other archaeal ModA proteins.

  9. Validation of the MODIS MOD21 and MOD11 land surface temperature and emissivity products in an arid area of Northwest China

    Science.gov (United States)

    Li, H.; Yang, Y.; Yongming, D.; Cao, B.; Qinhuo, L.

    2017-12-01

    Land surface temperature (LST) is a key parameter for hydrological, meteorological, climatological and environmental studies. During the past decades, many efforts have been devoted to the establishment of methodology for retrieving the LST from remote sensing data and significant progress has been achieved. Many operational LST products have been generated using different remote sensing data. MODIS LST product (MOD11) is one of the most commonly used LST products, which is produced using a generalized split-window algorithm. Many validation studies have showed that MOD11 LST product agrees well with ground measurements over vegetated and inland water surfaces, however, large negative biases of up to 5 K are present over arid regions. In addition, land surface emissivity of MOD11 are estimated by assigning fixed emissivities according to a land cover classification dataset, which may introduce large errors to the LST product due to misclassification of the land cover. Therefore, a new MODIS LSE&E product (MOD21) is developed based on the temperature emissivity separation (TES) algorithm, and the water vapor scaling (WVS) method has also been incorporated into the MODIS TES algorithm for improving the accuracy of the atmospheric correction. The MOD21 product will be released with MODIS collection 6 Tier-2 land products in 2017. Due to the MOD21 products are not available right now, the MODTES algorithm was implemented including the TES and WVS methods as detailed in the MOD21 Algorithm Theoretical Basis Document. The MOD21 and MOD11 C6 LST products are validated using ground measurements and ASTER LST products collected in an arid area of Northwest China during the Heihe Watershed Allied Telemetry Experimental Research (HiWATER) experiment. In addition, lab emissivity spectra of four sand dunes in the Northwest China are also used to validate the MOD21 and MOD11 emissivity products.

  10. Irradiation hardening of Mod.9Cr-1Mo steel

    International Nuclear Information System (INIS)

    Ryu, Woo-Seog; Kim, Sung-Ho; Choo, Kee-Nam; Kim, Do-Sik

    2009-01-01

    An irradiation test of Mod.9Cr-1Mo steel was carried out in the OR5 test hole of HANARO of a 30 MW thermal power at 390±10degC up to a fast neutron fluence of 4.4x10 19 (n/cm 2 ) (E > 1.0 MeV). The dpa of the irradiated specimens was evaluated to be 0.034 - 0.07. Tensile and impact tests of the irradiated Mod.9Cr-1Mo were done in the hot cell of the IMEF. The change of the tensile strength by irradiation was similar to the change of the yield strength. The increase of the yield and tensile strengths was up to 18% and 10% respectively. The elongation reduction of the weldment was up to 65%. (author)

  11. RELAP4/MOD-5-CEA pump coastdown experiment simulation

    International Nuclear Information System (INIS)

    Borges, R.C.; Freitas, R.L.

    1988-07-01

    Since is important the theoretical-experimental comparison to evaluate the computer codes, these paper presents the simulation with RELAP4/MOD5 Code of a loss of power energy in the pump of the ''Circuito Experimental de Agua-CEA''. From the results attained, the existing models in the Code showed to be very satisfatory quantitative and qualitative behavior of the attained experimental results. (author) [pt

  12. Blow.MOD2: a program for blowdown transient calculations

    International Nuclear Information System (INIS)

    Doval, A.

    1990-01-01

    The BLOW.MOD2 program has been developed to calculate the blowdown phase in a pressurized vessel after a break/valve is opened. It is a one volume model where break height and flow area are specified. Moody critical flow model was adopted under saturation conditions for flow calculation through the break. Heat transfer from structures and internals have been taken into account. Long term depressurization results and a more complex model are compared satisfactorily. (Author)

  13. Et farvel til terror? Krigen mod ISIS 2014-2015

    DEFF Research Database (Denmark)

    Et farvel til terror? – Krigen mod ISIS 2014-2015 har til hensigt at belyse aspekter af håndteringen af den nye sikkerhedspolitiske situation i Mellemøsten, der er opstået i kølvandet på fremkomsten af ISIS. Gennem en række selvstændige kapitler fremføres forskellige perspektiver, der både hver i...

  14. TRAC-PF1/MOD1 assessment at Los Alamos

    International Nuclear Information System (INIS)

    Knight, T.D.

    1984-01-01

    The Los Alamos National Laboratory is developing the Transient Reactor Analysis Code (TRAC) to provide an advanced best-estimate predictive capability for the analysis of postulated accidents in pressurized water reactors (PWRs). Over the past several years, four distinct versions of the code have been released; each new version introduced improvements to the existing models and numerics and added new models to extend the applications of the code. The first goal of the code was to analyze large-break loss-of-coolant accidents (LOCAs), and the TRAC-P1A and TRAC-PD2 codes primarily addressed the large-break LOCA. (The TRAC-PD2/MOD1 code is essentially the same as the TRAC-PD2 code but it also includes a released set of error corrections.) The TRAC-PF1 code contained major changes to the models and trips and to the numerical methods. These modifications enhanced the computational speed of the code and improved the application to small-break LOCAs. The TRAC-PF1/MOD1 code, the latest released version, added improved steam-generator modeling, a turbine component, and a control system together with modified constitutive relations to model the balance of plant on the secondary side and to extend the applications to non-LOCA transients. The TRAC-PF1/MOD1 code also contains reasonably general reactor-kinetics modeling to facilitate the simulation of transients with delayed scram or without scram. 13 references, 24 figures

  15. Recueil de modèles aléatoires

    CERN Document Server

    Chafai, Djalil

    2016-01-01

    Ce recueil puise sa source dans les cours de master de mathématiques appliquées et de préparation à l’épreuve de modélisation de l’agrégation de mathématiques. Le parti pris de cet ouvrage est de polariser la rédaction par les modèles plutôt que par les outils, et de consacrer chaque chapitre à un modèle. Le premier public visé est celui des enseignants-chercheurs en probabilités, débutants ou confirmés. De nombreux chapitres peuvent également bénéficier directement à des étudiants de master ou préparant l’agrégation. Collected Stochastic Models This collection was inspired by applied mathematics Master classes in stochastic modeling. The focus is on models rather than on tools, and each chapter is devoted to a specific model. Though the book is primarily intended for academics in the field of probability theory, beginners and experienced researchers alike, many chapters will also benefit students preparing to pursue their Master degree in mathematics. .

  16. La modélisation par Reverse Monte Carlo (RMC)

    Science.gov (United States)

    McGreevy, R. L.

    2003-09-01

    La technique de modélisation par Reverse Monte Carlo (RMC) est une méthode générale de modélisation structurale à partir d'un ensemble de données expérimentales. Cette méthode étant très souple, elle peut s'appliquer à de nombreux types de données. Jusqu'à présent ces applications comprennent : la diffraction des neutrons (y compris la substitution isotopique), la diffraction des rayons X (y compris la diffusion anomale), la diffraction des électrons, la RMN (les techniques d'angle magique et de 2ème moment) et l'EXAFS. Les systèmes étudiés sont également d'une grande variété : liquides, verres, polymères, cristaux et matériaux magnétiques, par exemple. Ce cours présente les bases de la méthode RMC en signalant certaines des idées fausses répandues. L'accent sera mis sur le fait que les modèles structuraux obtenus par RMC ne sont ni'uniques' ni 'exacts' ; cependant ils sont souvent utiles à la compréhension soit de la structure du système, soit des relations entre structure et autres propriétés physiques.

  17. Les enjeux du modèle standard

    CERN Document Server

    CERN. Geneva

    2008-01-01

    Toute la matière visible dans l'Univers est décrite par le « Modèle Standard ». Selon cette théorie, la matière est constituée d'atomes, qui contiennent des électrons orbitant autour de noyaux, dont les composants fondamentaux sont les quarks. Quatre forces fondamentales agissent entre ces particules élémentaires : les forces électromagnétique est gravitationnelle, et les interactions nucléaires forte et faible. La description fournie par le Modèle Standard de ces particules et de leurs interactions est en parfait accord avec les expériences. Néanmoins, des questions fondamentales restent sans réponse jusqu'à maintenant : d'où vient la masse des particules ? Pourquoi y a-t-il tant de types de particules ? Existe-t-il une théorie unifiée de toutes les interactions ? Quelle est la nature de la matière cachée prédite par les astrophysiciens ? Le LHC au CERN donnera des éléments de réponse à ces questions au-delà du Modèle Standard.

  18. ModBack - simplified contaminant source zone delineation using backtracking

    Science.gov (United States)

    Thielsch, K.; Herold, M.; Ptak, T.

    2012-12-01

    Contaminated groundwater poses a serious threat to drinking water resources all over the world. Even though contaminated water might be detected in observation wells, a proper clean up is often only successful if the source of the contamination is detected and subsequently removed, contained or remediated. The high costs of groundwater remediation could be possibly significantly reduced if, from the outset, a focus is placed on source zone detection. ModBack combines several existing modelling tools in one easy to use GIS-based interface helping to delineate potential contaminant source zones in the subsurface. The software is written in Visual Basic 3.5 and uses the ArcObjects library to implement all required GIS applications. It can run without modification on any Microsoft Windows based PC with sufficient RAM and at least Microsoft .NET Framework 3.5. Using ModBack requires additional installation of the following software: Processing Modflow Pro 7.0, ModPath, CSTREAM (Bayer-Raich et al., 2003), Golden Software Surfer and Microsoft Excel. The graphical user interface of ModBack is separated into four blocks of procedures dealing with: data input, groundwater modelling, backtracking and analyses. Geographical data input includes all georeferenced information pertaining to the study site. Information on subsurface contamination is gathered either by conventional sampling of monitoring wells or by conducting integral pumping tests at control planes with a specific sampling scheme. Hydraulic data from these pumping tests together with all other available information are then used to set up a groundwater flow model of the study site, which provides the flow field for transport simulations within the subsequent contamination backtracking procedures, starting from the defined control planes. The backtracking results are then analysed within ModBack. The potential areas of contamination source presence or absence are determined based on the procedure used by Jarsjö et

  19. Modding a free and open source software video game: "Play testing is hard work"

    Directory of Open Access Journals (Sweden)

    Giacomo Poderi

    2014-03-01

    Full Text Available Video game modding is a form of fan productivity in contemporary participatory culture. We see modding as an important way in which modders experience and conceptualize their work. By focusing on modding in a free and open source software video game, we analyze the practice of modding and the way it changes modders' relationship with their object of interest. The modders' involvement is not always associated with fun and creativity. Indeed, activities such as play testing often undermine these dimensions of modding. We present a case study of modding that is based on ethnographic research done for The Battle for Wesnoth, a free and open source software strategy video game entirely developed by a community of volunteers.

  20. Modélisation moléculaire empirique par Dynamique Moléculaire de ...

    African Journals Online (AJOL)

    Le champ de forces empiriques SPASIBA nous a permis de modéliser des édifices de type procyanidine B2-diméthyle dans le but d'identifier les structures probables de ces modèles retrouvés dans le milieu intérieur (plasma). Six modèles possibles ont été établis. Ce sont le procyanidine B2-diméthyle 1, le procyanidine ...

  1. RELAP5/MOD1-EUR evaluation. Comparison with the INEL original version

    International Nuclear Information System (INIS)

    Mazzantini, O.A.

    1990-01-01

    In this work, the values calculated from two versions of the RELAP5/MOD1 code are compared with those measured in different tests. The first version of RELAP5 is the cycle 19 of the original version of INEL (RELAP5/MOD1-INEL) and the second version improved by EURATOM (RELAP5/MOD1-EUR) which was transferred to ENACE through agreements made with SIEMENS/KWU. (Author) [es

  2. The ModERN Resource: Genome-Wide Binding Profiles for Hundreds ofDrosophilaandCaenorhabditis elegansTranscription Factors.

    Science.gov (United States)

    Kudron, Michelle M; Victorsen, Alec; Gevirtzman, Louis; Hillier, LaDeana W; Fisher, William W; Vafeados, Dionne; Kirkey, Matt; Hammonds, Ann S; Gersch, Jeffery; Ammouri, Haneen; Wall, Martha L; Moran, Jennifer; Steffen, David; Szynkarek, Matt; Seabrook-Sturgis, Samantha; Jameel, Nader; Kadaba, Madhura; Patton, Jaeda; Terrell, Robert; Corson, Mitch; Durham, Timothy J; Park, Soo; Samanta, Swapna; Han, Mei; Xu, Jinrui; Yan, Koon-Kiu; Celniker, Susan E; White, Kevin P; Ma, Lijia; Gerstein, Mark; Reinke, Valerie; Waterston, Robert H

    2018-03-01

    To develop a catalog of regulatory sites in two major model organisms, Drosophila melanogaster and Caenorhabditis elegans , the modERN (model organism Encyclopedia of Regulatory Networks) consortium has systematically assayed the binding sites of transcription factors (TFs). Combined with data produced by our predecessor, modENCODE (Model Organism ENCyclopedia Of DNA Elements), we now have data for 262 TFs identifying 1.23 M sites in the fly genome and 217 TFs identifying 0.67 M sites in the worm genome. Because sites from different TFs are often overlapping and tightly clustered, they fall into 91,011 and 59,150 regions in the fly and worm, respectively, and these binding sites span as little as 8.7 and 5.8 Mb in the two organisms. Clusters with large numbers of sites (so-called high occupancy target, or HOT regions) predominantly associate with broadly expressed genes, whereas clusters containing sites from just a few factors are associated with genes expressed in tissue-specific patterns. All of the strains expressing GFP-tagged TFs are available at the stock centers, and the chromatin immunoprecipitation sequencing data are available through the ENCODE Data Coordinating Center and also through a simple interface (http://epic.gs.washington.edu/modERN/) that facilitates rapid accessibility of processed data sets. These data will facilitate a vast number of scientific inquiries into the function of individual TFs in key developmental, metabolic, and defense and homeostatic regulatory pathways, as well as provide a broader perspective on how individual TFs work together in local networks and globally across the life spans of these two key model organisms. Copyright © 2018 by the Genetics Society of America.

  3. Modelling three-dimensional beta sources for skin dose calculations using VARSKIN Mod 2

    International Nuclear Information System (INIS)

    Durham, J.S.; Reece, W.D.

    1991-01-01

    The computer code VARSKIN Mod 1 has been modified to include three-dimensional sources and insertion of layers of protective clothing between the source and the skin. The new code, VARSKIN Mod 2, is described, and the sensitivity of the dose to source geometry, diameter, thickness, density, and protective clothing thickness are presented for low, intermediate, and high energy beta emitters. Finally, doses calculated using VARSKIN Mod 2 are compared with dose measured from hot particles found in nuclear power plants. The results indicate that VARSKIN Mod 2 will greatly improve the accuracy of hot particle dosimetry. (author)

  4. 64 Application d'un modèle conceptuel et d'un modèle de réseaux ...

    African Journals Online (AJOL)

    PR BOKO

    une catégorie de modèles pluie–débit basée sur l'intelligence artificielle [4]. Les réseaux de neurones artificiels (RNA) constituent une approche de modélisation des systèmes complexes [6-15]. Les performances de ces derniers dans la modélisation des phénomènes non-linéarires ont été prouvées dans plusieurs.

  5. Analyse, Modélisation et Simulation du Mouvement Humain

    OpenAIRE

    Multon , Franck

    2006-01-01

    Comprendre le mouvement humain mobilise des chercheurs de nombreuses disciplines scientifiques : physiologie, biomécanique, neurosciences comportementales, anatomie fonctionnelle, les sciences du sport... Mes travaux s'inscrivent donc dans une démarche pluridisciplinaire d'analyse/synthèse du mouvement humain. Pour mener à bien cette démarche, une première tâche consiste à modéliser et à simuler le système moteur ainsi qu'un ensemble d'hypothèses. L'objectif est de disposer d'une représentati...

  6. Edge Ion Heating during ICRH in Alcator C-Mod

    Science.gov (United States)

    Rost, J. C.; Boivin, R. L.; Porkolab, M.; Reardon, J.; Takase, Y.

    1997-11-01

    Observations of edge ion heating during ICRF injection on Alcator C-Mod have been made using a toroidally and poloidally scanning charge-exchange neutral particle analyzer. The ion tails create a large flux of charge-exchange neutrals (hydrogen and deuterium), at suprathermal energies, with a short rise time (exchange data from different poloidal sightlines taken during toroidal field ramps shows that the ion tails are generated near the radius of the antenna-protection limiter. Experimental estimates of the spatial dependence of the RF power going to the tails are made for one toroidal field value.

  7. The physics and engineering of Alcator C-Mod

    International Nuclear Information System (INIS)

    Hutchinson, I.H.; Becker, H.; Bonoli, P.

    1988-08-01

    Alcator C-Mod is a new tokamak under construction at M.I.T. that promises to play an important and flexible role in the international fusion research effort. The physics and engineering features of the tokamak are described, giving an overview of the machine and plasma configurations. On the basis of empirical scaling laws, we predict the plasma confinement performance to be near DT equivalent breakeven. The planned experimental program is addressed to many of the vital physics questions still uncertain in high-performance tokamak plasma behaviour as well as to the investigation of innovative approaches to tokamak improvement. 17 refs., 17 figs., 3 tabs

  8. Conceptual design Alcator C-MOD magnetic systems

    International Nuclear Information System (INIS)

    Schultz, J.H.; Becker, H.; Fertl, K.; Gwinn, D.; Montgomery, D.B.; Pierce, N.T.; Pillsbury, R.D. Jr.; Thome, R.J.

    1986-01-01

    The conceptual designs of the magnetic systems for Alcator C-MOD, a proposed tokamak at M.I.T., are described, including the toroidal magnet, the poloidal field coils and the cryogenic system. The toroidal magnet is constructed from rectangular plates, connected by sliding joints. Toroidal magnet forces are contained by a steel superstructure. Poloidal coil system options are largely or wholly inside the TF magnet, in order to control plasmas with high current, strong shaping, and expanded boundaries. All magnets are cryocooled by the natural circulation of boiling liquid nitrogen. 3 refs., 5 figs

  9. Edge Turbulence Imaging on NSTX and Alcator C-Mod

    International Nuclear Information System (INIS)

    S.J. Zweben; R.A. Maqueda; J.L. Terry; B. Bai; C.J. Boswell; C.E. Bush; D. D'Ippolito; E.D. Fredrickson; M. Greenwald; K. Hallatschek; S. Kaye; B. LaBombard; R. Maingi; J. Myra; W.M. Nevins; B.N. Rogers; D.P. Stotler; J. Wilgen; and X.Q. Xu

    2002-01-01

    Edge turbulence images have been made using an ultra-high speed CCD camera on both NSTX and Alcator C-Mod. In both cases, the D-alpha or HeI (587.6 nm) line emission from localized deuterium or helium gas puffs was viewed along a local magnetic field line near the outer midplane. Fluctuations in this line emission reflect fluctuations in electron density and/or electron temperature through the atomic excitation rates, which can be modeled using the DEGAS-2 code. The 2-D structure of the measured turbulence can be compared with theoretical simulations based on 3-D fluid models

  10. Binding and Oligomerization of Modified and Native Bt Toxins in Resistant and Susceptible Pink Bollworm.

    Directory of Open Access Journals (Sweden)

    Josue Ocelotl

    Full Text Available Insecticidal proteins from Bacillus thuringiensis (Bt are used extensively in sprays and transgenic crops for pest control, but their efficacy is reduced when pests evolve resistance. Better understanding of the mode of action of Bt toxins and the mechanisms of insect resistance is needed to enhance the durability of these important alternatives to conventional insecticides. Mode of action models agree that binding of Bt toxins to midgut proteins such as cadherin is essential for toxicity, but some details remain unresolved, such as the role of toxin oligomers. In this study, we evaluated how Bt toxin Cry1Ac and its genetically engineered counterpart Cry1AcMod interact with brush border membrane vesicles (BBMV from resistant and susceptible larvae of Pectinophora gossypiella (pink bollworm, a global pest of cotton. Compared with Cry1Ac, Cry1AcMod lacks 56 amino acids at the amino-terminus including helix α-1; previous work showed that Cry1AcMod formed oligomers in vitro without cadherin and killed P. gossypiella larvae harboring cadherin mutations linked with >1000-fold resistance to Cry1Ac. Here we found that resistance to Cry1Ac was associated with reduced oligomer formation and insertion. In contrast, Cry1AcMod formed oligomers in BBMV from resistant larvae. These results confirm the role of cadherin in oligomerization of Cry1Ac in susceptible larvae and imply that forming oligomers without cadherin promotes toxicity of Cry1AcMod against resistant P. gossypiella larvae that have cadherin mutations.

  11. Implementation of the thermal-hydraulic transient analysis code RELAP4/MOD5 and MOD6 on the FACOM 230/75 computer system

    International Nuclear Information System (INIS)

    Kohsaka, Atsuo; Ishigai, Takahiro; Kumakura, Toshimasa; Naraoka, Ken-itsu

    1979-03-01

    Development efforts have continued on the extensively used LOCA analysis code RELAP-4, as seen in its history; that is, from the prototype version MOD2 to the latest one MOD6 which is capable of one-through calculations from blowdown to reflood phase of PWR-LOCA. Many improvements and refinements of the models have enlarged the scopes and extents of phenomena to treat. Correspondingly the size of program has increased version to version, and special programming techniques have continuously been introduced to manage the program within limited capacity of core memory. For example, the Dynamic Storage Allocation of MOD5 and the PRELOAD Preprocessor newly incorporated in MOD6 are those designed for the CDC computer with relatively small core size. Described are these programming techniques in detail and experiences on implementation of the codes on FACOM 230/75, together with some results of confirmatory calculations. (author)

  12. Modélisation de la vision inspirée du vivant

    OpenAIRE

    Coussy, Philippe; Chavet, Cyrille

    2014-01-01

    National audience; Modélisation de la vision inspirée du vivant Modélisation de la vision inspirée du vivant Journée Journée prospective: prospective: Innover par la voie du Innover par la voie du biomimétisme biomimétisme Rennes, Rennes, Octobre Octobre 2014. 2014.

  13. The mod industries? The industrial logic of non-market game production

    OpenAIRE

    2008-01-01

    Abstract This article seeks to make the relationship between non-market game developers (modders) and the game developer company explicit through game technology. It investigates a particular type of modding, i.e. total conversion mod teams, whose organization can be said to conform to the high-risk, technologically-advanced, capital-intensive, proprietary practice of the developer company. The notion ...

  14. The mod industries? The industrial logic of non-market game production

    NARCIS (Netherlands)

    Nieborg, D.B.; van der Graaf, S.

    2008-01-01

    This article seeks to make the relationship between non-market game developers (modders) and the game developer company explicit through game technology. It investigates a particular type of modding, i.e. total conversion mod teams, whose organization can be said to conform to the high-risk,

  15. Moving Past "Hello World": Learning to Mod in an Online Affinity Space

    Science.gov (United States)

    Subramanian, Shree Durga

    2012-01-01

    Game modding has increasingly become a mainstream and "cutting edge" medium to foster a broad range of critical software design and programming practices to learners coming from wide-ranging educational and professional backgrounds. Participatory practices, like game modding, are highly interest-driven and entail intense engagement with…

  16. BLOW.MOD2: program for a vessel depressurization calculation with the contribution of structures

    International Nuclear Information System (INIS)

    Doval, A.

    1990-01-01

    The BLOW.MOD2 program developed to calculate pressure vessels' depressurization is presented, considering heat contribution of the structures. The results are opposite to those obtained from other more complex numerical models, being the comparison extremely satisfactory. BLOW.MOD2 is a software of the 'Systems Sub-Branch', INVAP S.E. (Author) [es

  17. Pulsed klystrons with feedback controlled mod-anode modulators

    Energy Technology Data Exchange (ETDEWEB)

    Reass, William A [Los Alamos National Laboratory; Baca, David M [Los Alamos National Laboratory; Jerry, Davis L [Los Alamos National Laboratory; Rees, Daniel E [Los Alamos National Laboratory

    2009-01-01

    This paper describes a fast rise and fall, totem-pole mod-anode modulators for klystron application. Details of these systems as recently installed utilizing a beam switch tube ''on-deck'' and a planar triode ''off-deck'' in a grid-catch feedback regulated configuration will be provided. The grid-catch configuration regulates the klystron mod-anode voltage at a specified set-point during switching as well as providing a control mechanism that flat-top regulates the klystron beam current during the pulse. This flat-topped klystron beam current is maintained while the capacitor bank droops. In addition, we will review more modern on-deck designs using a high gain, high voltage planar triode as a regulating and switching element. These designs are being developed, tested, and implemented for the Los Alamos Neutron Science Center (LANSCE) accelerator refurbishment project, ''LANSCE-R''. An advantage of the planar triode is that the tube can be directly operated with solid state linear components and provides for a very compact design. The tubes are inexpensive compared to stacked semiconductor switching assemblies and also provide a linear control capability. Details of these designs are provided as well as operational and developmental results.

  18. Migration of alcator C-Mod computer infrastructure to Linux

    International Nuclear Information System (INIS)

    Fredian, T.W.; Greenwald, M.; Stillerman, J.A.

    2004-01-01

    The Alcator C-Mod fusion experiment at MIT in Cambridge, Massachusetts has been operating for twelve years. The data handling for the experiment during most of this period was based on MDSplus running on a cluster of VAX and Alpha computers using the OpenVMS operating system. While the OpenVMS operating system provided a stable reliable platform, the support of the operating system and the software layered on the system has deteriorated in recent years. With the advent of extremely powerful low cost personal computers and the increasing popularity and robustness of the Linux operating system a decision was made to migrate the data handling systems for C-Mod to a collection of PC's running Linux. This paper will describe the new system configuration, the effort involved in the migration from OpenVMS, the results of the first run campaign under the new configuration and the impact the switch may have on the rest of the MDSplus community

  19. idRHa+ProMod - Rail Hardening Control System

    International Nuclear Information System (INIS)

    Ferro, L

    2016-01-01

    idRHa+ProMod is the process control system developed by Primetals Technologies to foresee the thermo-mechanical evolution and micro-structural composition of rail steels subjected to slack quenching into idRHa+ Rail Hardening equipments in a simulation environment. This tool can be used both off-line or in-line, giving the user the chance to test and study the best cooling strategies or letting the automatic control system free to adjust the proper cooling recipe. Optimization criteria have been tailored in order to determine the best cooling conditions according to the metallurgical requirements imposed by the main rail standards and also taking into account the elastoplastic bending phenomena occurring during all stages of the head hardening process. The computational core of idRHa+ProMod is a thermal finite element procedure coupled with special algorithms developed to work out the main thermo-physical properties of steel, to predict the non-isothermal austenite decomposition into all the relevant phases and subsequently to evaluate the amount of latent heat of transformation released, the compound thermal expansion coefficient and the amount of plastic deformation in the material. Air mist and air blades boundary conditions have been carefully investigated by means of pilot plant tests aimed to study the jet impingement on rail surfaces and the cooling efficiency at all working conditions. Heat transfer coefficients have been further checked and adjusted directly on field during commissioning. idRHa+ is a trademark of Primetals Technologies Italy Srl (paper)

  20. Progress on MOD/RABiTSTM 2G HTS wire

    International Nuclear Information System (INIS)

    Rupich, M.W.; Zhang, W.; Li, X.; Kodenkandath, T.; Verebelyi, D.T.; Schoop, U.; Thieme, C.; Teplitsky, M.; Lynch, J.; Nguyen, N.; Siegal, E.; Scudiere, J.; Maroni, V.; Venkataraman, K.; Miller, D.; Holesinger, T.G.

    2004-01-01

    The development of the second generation (2G) high temperature superconducting wire has advanced beyond initial laboratory demonstrations and is now focused on developing and testing high critical current conductor designs required for commercial applications. The approach pursued at American Superconductor for 2G wire manufacturing is based on the combination of the RABiTS TM substrate-buffer technology with metal organic deposition (MOD) of the YBCO layer. This MOD/RABiTS TM approach has been demonstrated in 10 m lengths with critical currents of up to 184 A/cm-width (∼2.3 MA/cm 2 ) and in short length with critical currents of up to 270 A/cm-width (∼3.4 MA/cm 2 ). In addition to a high critical current, the superconducting wire must also meet stringent mechanical and electrical stability requirements that vary by application. Commercially viable architectures designed to meet these specifications have been fabricated and tested. Wires manufactured by this process have been successfully tested in prototype cable and coil applications

  1. Helical flow in RFX-mod tokamak plasmas

    Science.gov (United States)

    Piron, L.; Zaniol, B.; Bonfiglio, D.; Carraro, L.; Kirk, A.; Marrelli, L.; Martin, R.; Piron, C.; Piovesan, P.; Zuin, M.

    2017-05-01

    This work presents the first evidence of helical flow in RFX-mod q(a)  predicted by several codes, such as Specyl (Bonfiglio et al 2005 Phys. Rev. Lett. 94 145001), PIXIE3D (Chacón et al 2008 Phys. Plasmas 15 056103), NIMROD (King et al 2012 Phys. Plasmas 19 055905) and M3D-C1 (Jardin et al 2015 Phys. Rev. Lett. 115 215001). Among them, the 3D fully non-linear PIXIE3D has been used to calculate synthetic flow measurements, using a 2D flow modelling code. Inputs to the code are the PIXIE3D flow maps, the ion emission profiles as calculated by a 1D collisional radiative impurity transport code (Carraro et al 2000 Plasma Phys. Control. Fusion 42 731) and a synthetic diagnostic with the same geometry installed in RFX-mod. Good agreement between the synthetic and the experimental flow behaviour has been obtained, confirming that the flow oscillations observed with the associated convective cells are a signature of helical flow.

  2. Upgrade of the RFX-mod real time control system

    Energy Technology Data Exchange (ETDEWEB)

    Manduchi, G., E-mail: gabriele.manduchi@igi.cnr.it [Consorzio RFX, Euratom-ENEA Association, Corso Stati Uniti 4, Padova 35127 (Italy); Barbalace, A.; Luchetta, A.; Soppelsa, A.; Taliercio, C.; Zampiva, E. [Consorzio RFX, Euratom-ENEA Association, Corso Stati Uniti 4, Padova 35127 (Italy)

    2012-12-15

    Highlights: Black-Right-Pointing-Pointer The paper describes the experience in running the real-time control system of RFX-mod. Black-Right-Pointing-Pointer It proposes a new architecture based multicore technology. Black-Right-Pointing-Pointer It analyzes two different solutions for data acquisition. Black-Right-Pointing-Pointer It discusses the effect of non simultaneous sampling in acquisition. Black-Right-Pointing-Pointer It provides some preliminary performance measurements. - Abstract: The real-time control system of RFX-mod, in operation since 2005, has been successful and has allowed several important achievements in the RFX physics research program. As a consequence of this fact, new control algorithms are under investigation, which are more demanding in terms of both enhanced computing power and reduced system latency, currently around 1.5 ms. For this reason, a major upgrade of the system is being considered, and a new architecture has been proposed, taking advantage of the rapid evolution of computer technology in the last years. The central component of the new architecture is a Linux-based multicore server, where individual cores replace the VME computers. The server is connected to the I/O via PCI-e based bus extenders, and every PCI-e connection is managed by a separate core. The system is supervised by MARTe, a software framework for real-time applications written in C++ and developed at JET and currently used for the JET vertical stabilization and in other fusion devices.

  3. Correlation ECE diagnostic in Alcator C-Mod

    International Nuclear Information System (INIS)

    Sung, C.; Irby, J.; Leccacorvi, R.; Vieira, R.; Oi, C.; Rice, J.; Reinke, M.; Gao, C.; Ennever, P.; Porkolab, M.; Churchill, R.; Theiler, C.; Walk, J.; Hughes, J.; Hubbard, A.; Greenwald, M.

    2015-01-01

    Correlation ECE (CECE) is a diagnostic technique that allows measurement of small amplitude electron temperature, Te, fluctuations through standard cross-correlation analysis methods. In Alcator C-Mod, a new CECE diagnostic has been installed[Sung RSI 2012], and interesting phenomena have been observed in various plasma conditions. We find that local Te fluctuations near the edge (ρ ~ 0:8) decrease across the linearto- saturated ohmic confinement transition, with fluctuations decreasing with increasing plasma density [Sung NF 2013], which occurs simultaneously with rotation reversals [Rice NF 2011]. Te fluctuations are also reduced across core rotation reversals with an increase of plasma density in RF heated L-mode plasmas, which implies that the same physics related to the reduction of Te fluctuations may be applied to both ohmic and RF heated L-mode plasmas. In I-mode plasmas, we observe the reduction of core Te fluctuations, which indicates changes of turbulence occur not only in the pedestal region but also in the core across the L/I transition [White NF 2014]. The present CECE diagnostic system in C-Mod and these experimental results are described in this paper

  4. idRHa+ProMod - Rail Hardening Control System

    Science.gov (United States)

    Ferro, L.

    2016-03-01

    idRHa+ProMod is the process control system developed by Primetals Technologies to foresee the thermo-mechanical evolution and micro-structural composition of rail steels subjected to slack quenching into idRHa+ Rail Hardening equipments in a simulation environment. This tool can be used both off-line or in-line, giving the user the chance to test and study the best cooling strategies or letting the automatic control system free to adjust the proper cooling recipe. Optimization criteria have been tailored in order to determine the best cooling conditions according to the metallurgical requirements imposed by the main rail standards and also taking into account the elastoplastic bending phenomena occurring during all stages of the head hardening process. The computational core of idRHa+ProMod is a thermal finite element procedure coupled with special algorithms developed to work out the main thermo-physical properties of steel, to predict the non-isothermal austenite decomposition into all the relevant phases and subsequently to evaluate the amount of latent heat of transformation released, the compound thermal expansion coefficient and the amount of plastic deformation in the material. Air mist and air blades boundary conditions have been carefully investigated by means of pilot plant tests aimed to study the jet impingement on rail surfaces and the cooling efficiency at all working conditions. Heat transfer coefficients have been further checked and adjusted directly on field during commissioning. idRHa+ is a trademark of Primetals Technologies Italy Srl

  5. Swedish experience with RELAP5/MOD2 assessment

    International Nuclear Information System (INIS)

    Sandervag, O.

    1987-01-01

    The Swedish assessment of RELAP5/MOD2 is a part of the International Code Assessment program which is organized by the US NRC. The major part of the experimental data used for assessment is of Swedish origin. The data encompass critical flow and level swell data from the Marviken facility. A part of the agreed assessment matrix has been completed. Comparison with BWR integral test data shows that the major phenomena which control the core cooling during intermediate and large break LOCA are qualitatively reproduced by RELAP5. Assessment against separate and integral experiments shows that the dominant uncertainty in prediction of clad temperatures is due to a poor calculation of dryout. Predicted post dryout wall temperatures, given the experimental dryout location as input parameter, generally agree well with data. Simulations of level swell following depressurization of the large diameter Marviken vessel showed that RELAP5/MOD2 was able to calculate overall axial void profiles in fair agreement with data. The assessment indicated that increasing the modeling detail could give rise to numerical instabilities. Assessment against large scale critical flow data revealed that the agreement with data was somewhat dependent on upstream fluid conditions and modeling. Low quality two phase flow was, in general, accurately predicted while subcooled liquid flow and saturated steam flow were generally overpredicted if no discharge coefficient was applied

  6. Modèle exploitable pour la définition de la commande du robot

    OpenAIRE

    ZIMMER-CHEVRET, Sandra; LANGLOIS, Laurent; BEN ATTAR, Amarilys

    2014-01-01

    Ce document traite de la modélisation des actions mécaniques entre l’outil et la matière. L’objectif est de définir un modèle exploitable pour la définition de la commande du robot. Dans un premier temps, le rapport présente une synthèse bibliographique des modèles des interactions mécaniques développés à ce jour. Pour un modèle choisi, les paramètres constituant ce dernier ont été calculés à partir de données expérimentales. Puis, la validité du modèle a été étudiée. Pour une même configurat...

  7. Self-similar current decay experiment in RFX-mod

    International Nuclear Information System (INIS)

    Zanca, Paolo

    2007-01-01

    The self-similar current decay (SSCD) has been suggested as a promising operation for reversed field pinch devices by numerical simulations, which show a decrease in modes amplitude and stochasticity when the magnetic field is forced to decay at a suitable rate at a fixed radial profile (Nebel et al 2002 Phys. Plasmas 9 4968). The first experimental test of SSCD has recently been performed in RFX-mod. An initial fast decrease in the mode amplitudes (about 40% of the initial value) is observed. After that, a regime characterized by transient states close to the single-helicity condition (Cappello and Paccagnella 1992 Phys. Fluids B 4 611, Finn et al 1992 Phys. Fluids B 4 1262) is established. This brings about a 50% increase in the global confinement parameters

  8. PREFACE: Modern Technologies in Industrial Engineering (ModTech2015)

    Science.gov (United States)

    Oanta, E.; Comaneci, R.; Carausu, C.; Placzek, M.; Cohal, V.; Topala, P.; Nedelcu, D.

    2015-11-01

    The dominant feature of the current stage of society development is the update, refinement and innovation of the technological processes and products whose ultimate goal is to satisfy the market requirements. New and modern technologies should be considered in terms of their applicability in industry while the materials can lead to an increase in the quality of the end products. Replacing the existing technologies with innovative and eco-efficient technologies can contribute to an added value increase in the production of new materials. Materials are one of the most dynamic and prospective fields, with applications in all other fields. The development of new advanced materials and technologies shall contribute to the procurement of a wide range of reliable products, with competitive prices and worldwide performance, high sensitivity and functionality, user-friendly and reduced energy consumption, for different industrial applications. Research in the field of advanced/intelligent materials supposes a fundamental, experimental, laboratory and technological research and its approach has to be linked to the application. This involves, even for the niche fields, complex projects which result in scientific issues in top journals, patents and functional models. The third edition of ModTech International Conference was held in Mamaia, Romania, between June 17-20, with the Professional Association in Modern Manufacturing Technologies, ModTech, as main organizer, and the Constanta Maritime University, Constanta, Romania, Silesian University of Technology, Gliwice, Poland, the Technical University of Chisinau, Republic of Moldova and the Donetsk National Technical University, Donetsk, Ukraine as co-organizers. The ModTech2015 International Conference brought together representatives of technology and materials manufacturers, various universities, professional associations and research institutes that exchanged the latest knowledge on the conference topics. This edition was

  9. Fooling the user? Modding in the video game industry

    Directory of Open Access Journals (Sweden)

    Merlin Münch

    2013-06-01

    Full Text Available Over the years, the video game industry has grown into one of the largest, most profitable entertainment industries in the world. In a highly competitive industry, legal difficulties to safeguard successful game concepts from copycats contribute to a trend of risk aversion and reliance on established game franchises. It does not come as a surprise then, that user-driven innovation, or 'modding', has come to play a considerably important role for the industry in recent years. While modders are becoming increasingly aware of the financial weight of their activities, game companies seek to secure the legal ownership of the content they create. By means of a literature review this article seeks to investigate the ongoing juridification of the relationship between modders and the industry, in order to provide a brief insight into the complex issue of intellectual property in relation to user generated content and the tensions that arise due to a mesh of messy legal and social arrangements.

  10. Mod-ϕ convergence normality zones and precise deviations

    CERN Document Server

    Féray, Valentin; Nikeghbali, Ashkan

    2016-01-01

    The canonical way to establish the central limit theorem for i.i.d. random variables is to use characteristic functions and Lévy’s continuity theorem. This monograph focuses on this characteristic function approach and presents a renormalization theory called mod-ϕ convergence. This type of convergence is a relatively new concept with many deep ramifications, and has not previously been published in a single accessible volume. The authors construct an extremely flexible framework using this concept in order to study limit theorems and large deviations for a number of probabilistic models related to classical probability, combinatorics, non-commutative random variables, as well as geometric and number-theoretical objects. Intended for researchers in probability theory, the text is carefully well-written and well-structured, containing a great amount of detail and interesting examples. .

  11. Identification of functional elements and regulatory circuits by Drosophila modENCODE

    Energy Technology Data Exchange (ETDEWEB)

    Roy, Sushmita; Ernst, Jason; Kharchenko, Peter V.; Kheradpour, Pouya; Negre, Nicolas; Eaton, Matthew L.; Landolin, Jane M.; Bristow, Christopher A.; Ma, Lijia; Lin, Michael F.; Washietl, Stefan; Arshinoff, Bradley I.; Ay, Ferhat; Meyer, Patrick E.; Robine, Nicolas; Washington, Nicole L.; Stefano, Luisa Di; Berezikov, Eugene; Brown, Christopher D.; Candeias, Rogerio; Carlson, Joseph W.; Carr, Adrian; Jungreis, Irwin; Marbach, Daniel; Sealfon, Rachel; Tolstorukov, Michael Y.; Will, Sebastian; Alekseyenko, Artyom A.; Artieri, Carlo; Booth, Benjamin W.; Brooks, Angela N.; Dai, Qi; Davis, Carrie A.; Duff, Michael O.; Feng, Xin; Gorchakov, Andrey A.; Gu, Tingting; Henikoff, Jorja G.; Kapranov, Philipp; Li, Renhua; MacAlpine, Heather K.; Malone, John; Minoda, Aki; Nordman, Jared; Okamura, Katsutomo; Perry, Marc; Powell, Sara K.; Riddle, Nicole C.; Sakai, Akiko; Samsonova, Anastasia; Sandler, Jeremy E.; Schwartz, Yuri B.; Sher, Noa; Spokony, Rebecca; Sturgill, David; van Baren, Marijke; Wan, Kenneth H.; Yang, Li; Yu, Charles; Feingold, Elise; Good, Peter; Guyer, Mark; Lowdon, Rebecca; Ahmad, Kami; Andrews, Justen; Berger, Bonnie; Brenner, Steven E.; Brent, Michael R.; Cherbas, Lucy; Elgin, Sarah C. R.; Gingeras, Thomas R.; Grossman, Robert; Hoskins, Roger A.; Kaufman, Thomas C.; Kent, William; Kuroda, Mitzi I.; Orr-Weaver, Terry; Perrimon, Norbert; Pirrotta, Vincenzo; Posakony, James W.; Ren, Bing; Russell, Steven; Cherbas, Peter; Graveley, Brenton R.; Lewis, Suzanna; Micklem, Gos; Oliver, Brian; Park, Peter J.; Celniker, Susan E.; Henikoff, Steven; Karpen, Gary H.; Lai, Eric C.; MacAlpine, David M.; Stein, Lincoln D.; White, Kevin P.; Kellis, Manolis

    2010-12-22

    To gain insight into how genomic information is translated into cellular and developmental programs, the Drosophila model organism Encyclopedia of DNA Elements (modENCODE) project is comprehensively mapping transcripts, histone modifications, chromosomal proteins, transcription factors, replication proteins and intermediates, and nucleosome properties across a developmental time course and in multiple cell lines. We have generated more than 700 data sets and discovered protein-coding, noncoding, RNA regulatory, replication, and chromatin elements, more than tripling the annotated portion of the Drosophila genome. Correlated activity patterns of these elements reveal a functional regulatory network, which predicts putative new functions for genes, reveals stage- and tissue-specific regulators, and enables gene-expression prediction. Our results provide a foundation for directed experimental and computational studies in Drosophila and related species and also a model for systematic data integration toward comprehensive genomic and functional annotation. Several years after the complete genetic sequencing of many species, it is still unclear how to translate genomic information into a functional map of cellular and developmental programs. The Encyclopedia of DNA Elements (ENCODE) (1) and model organism ENCODE (modENCODE) (2) projects use diverse genomic assays to comprehensively annotate the Homo sapiens (human), Drosophila melanogaster (fruit fly), and Caenorhabditis elegans (worm) genomes, through systematic generation and computational integration of functional genomic data sets. Previous genomic studies in flies have made seminal contributions to our understanding of basic biological mechanisms and genome functions, facilitated by genetic, experimental, computational, and manual annotation of the euchromatic and heterochromatic genome (3), small genome size, short life cycle, and a deep knowledge of development, gene function, and chromosome biology. The functions

  12. Neutral particle dynamics in the Alcator C-Mod tokamak

    Energy Technology Data Exchange (ETDEWEB)

    Niemczewski, Artur P. [Massachusetts Inst. of Technology (MIT), Cambridge, MA (United States)

    1995-08-01

    This thesis presents an experimental study of neutral particle dynamics in the Alcator C-Mod tokamak. The primary diagnostic used is a set of six neutral pressure gauges, including special-purpose gauges built for in situ tokamak operation. While a low main chamber neutral pressure coincides with high plasma confinement regimes, high divertor pressure is required for heat and particle flux dispersion in future devices such as ITER. Thus we examine conditions that optimize divertor compression, defined here as a divertor-to-midplane pressure ratio. We find both pressures depend primarily on the edge plasma regimes defined by the scrape-off-layer heat transport. While the maximum divertor pressure is achieved at high core plasma densities corresponding to the detached divertor state, the maximum compression is achieved in the high-recycling regime. Variations in the divertor geometry have a weaker effect on the neutral pressures. For otherwise similar plasmas the divertor pressure and compression are maximum when the strike point is at the bottom of the vertical target plate. We introduce a simple flux balance model, which allows us to explain the divertor neutral pressure across a wide range of plasma densities. In particular, high pressure sustained in the detached divertor (despite a considerable drop in the recycling source) can be explained by scattering of neutrals off the cold plasma plugging the divertor throat. Because neutrals are confined in the divertor through scattering and ionization processes (provided the mean-free-paths are much shorter than a typical escape distance) tight mechanical baffling is unnecessary. The analysis suggests that two simple structural modifications may increase the divertor compression in Alcator C-Mod by a factor of about 5. Widening the divertor throat would increase the divertor recycling source, while closing leaks in the divertor structure would eliminate a significant neutral loss mechanism.

  13. CONTEMPT4/MOD6: a multicompartment containment system analysis program

    International Nuclear Information System (INIS)

    Lin, C.C.; Economos, C.; Lehner, J.R.; Maise, G.

    1986-03-01

    CONTEMPT4/MOD6 is a digital computer program that describes the response of multicompartment containment system subjected to postulated loss-of-coolant accident (LOCA) conditions. The program is written in FORTRAN IV and can accomodate both pressurized water reactor (PWR) and boiling water reactor (BWR) containment systems. Also, both design basis accident (DBA) and degraded core type LOCA conditions can be analyzed. The program calculates the time variation of compartment pressures, temperatures and mass and energy inventories due to intercompartment mass and energy exchange taking into account user supplied descriptions of compartments, intercompartment junction flow areas, LOCA source terms and user selected problem features. Analytical models available to describe containment systems include models for containment fans and pumps, cooling sprays, heat conducting structures, sump drains, PWR ice condensers and BWR pressure suppression systems. To accommodate degraded core type accidents, analytical models for hydrogen and carbon monoxide combustion within compartments and energy transfer due to gas radiation are also provided. Dynamic storage allocation (DSA) is used to limit the amount of computer core used for each problem. The flexibility needed to more realistically model the complexity of prototypical containments is provided by the multicompartment capability (up to 999 individual compartments) and generalized user oriented input data descriptions. The program employs an implicit algorithm to compute junction flow when numerically induced flow oscillations are encountered. This capability provides significant reduction of computer run time relative to previous codes in the CONTEMPT series. Descriptions of these analytical models are presented, together with input instructions for the CONTEMPT4/MOD6 program and sample problem results. 23 refs., 62 figs

  14. Assessment of RELAP5/MOD3 with condensation experiment for pure steam condensation in a vercal tube

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Sang Jae; No, Hee Cheon [Korea Advanced Institute of Science and Technology, Taejon (Korea, Republic of)

    1998-12-31

    The film condensation models in RELAP5/MOD3.1 and RELAP5/MOD3.2 are assessed with the data of experiment performed in the scaled down condensation experimental facility with a single vertical tube of inner diameter of 46 mm in the range of pressure 0.1 {approx} 7.5 MPa for the PSCS(Passive Secondary Condenser System). Both MOD3.1 and MOD3.2 don`t shows any reliable predictions of the experimental data. The RELAP5/MOD3.1 overpredicts the heat transfer coefficients of experiment, whereas the RELAP5/MOD3.2 underpredicts those data. It is recommended that the film condensation model in RELAP5/MOD3.2 should be modified to have a larger heat transfer coefficient than those of the present model to give the reliable predictions. 7 refs., 6 figs., 1 tab. (Author)

  15. The LHCD Launcher for Alcator C-Mod - Design, Construction, Calibration and Testing

    International Nuclear Information System (INIS)

    Hosea, J.; Beals, D.; Beck, W.; Bernabei, S.; Burke, W.; Childs, R.; Ellis, R.; Fredd, E.; Greenough, N.; Grimes, M.; Gwinn, D.; Irby, J.; Jurczynski, S.; Koert, P.; Kung, C.C.; Loesser, G.D.; Marmar, E.; Parker, R.; Rushinski, J.; Schilling, G.; Terry, D.; Vieira, R.; Wilson, J.R.; Zaks, J.

    2005-01-01

    MIT and PPPL have joined together to fabricate a high-power lower hybrid current drive (LHCD) system for supporting steady-state AT regime research on Alcator C-Mod. The goal of the first step of this project is to provide 1.5 MW of 4.6 GHz rf [radio frequency] power to the plasma with a compact launcher which has excellent spectral selectivity and fits into a single C-Mod port. Some of the important design, construction, calibration and testing considerations for the launcher leading up to its installation on C-Mod are presented here

  16. Dynamique foliaire et croissance du maïs: Application du modèle ...

    African Journals Online (AJOL)

    Plusieurs modèles de simulation de la croissance foliaire ont été développés, surtout sous climat tempéré. Pour utiliser ces modèles en milieu tropical, une étude, conduite en RD Congo, se propose 1) de caractériser le couvert de 3 variétés de maïs adaptées en conditions locales et 2) d'ajuster le modèle de simulation de ...

  17. The LHCD launcher for Alcator C-Mod-Design, construction, calibration and testing

    International Nuclear Information System (INIS)

    Hosea, J.; Beals, D.; Beck, W.; Bernabei, S.; Burke, W.; Childs, R.; Ellis, R.; Fredd, E.; Greenough, N.; Grimes, M.; Gwinn, D.; Irby, J.; Jurczynski, S.; Koert, P.; Kung, C.C.; Loesser, G.D.; Marmar, E.; Parker, R.; Rushinski, J.; Schilling, G.; Terry, D.; Vieira, R.; Wilson, J.R.; Zaks, J.

    2005-01-01

    MIT and PPPL have joined together to fabricate a high-power lower hybrid current drive (LHCD) system for supporting steady-state AT regime research on Alcator C-Mod. The goal of the first step of this project is to provide 1.5 MW of 4.6 GHz rf power to the plasma with a compact launcher which has excellent spectral selectivity and fits into a single C-Mod port. Some of the important design, construction, calibration and testing considerations for the launcher leading up to its installation on C-Mod are presented here

  18. Le modèle de l’erreur humaine de James Reason

    OpenAIRE

    Larouzée, Justin; Guarnieri, Franck; Besnard, Denis

    2014-01-01

    Ce papier de recherche a pour objet de revenir en détail sur les travaux de recherche du psychologue anglais James Reason, mondialement célèbre pour sa taxonomie de l’erreur humaine et son modèle étiologique de l’accident immensément connu sous le nom de Swiss Cheese Model (SCM) ou Modèle du Fromage Suisse. Ce papier de recherche est une synthèse du parcours scientifique de Reason, il revient aussi sur la conception du modèle et ses évolutions, il traite de ses usages, apports et limites. Il ...

  19. Operational results for the experimental DOE/NASA Mod-OA wind turbine project

    Science.gov (United States)

    Shaltens, R. K.; Birchenough, A. G.

    The Mod-OA wind turbine project which was to gain early experience in the operation of large wind turbines in a utility environment is discussed. The Mod-OA wind turbines were a first generation design, and even though not cost effective, the operating experience and performance characteristics had a significant effect on the design and development of the second and third generation machines. The Mod-OA machines were modified as a result of the operational experience, particularly the blade development and control system strategy. The results of study to investigate the interaction of a Mod-OA wind turbine with an isolated diesel generation system are discussed. The machine configuration, its advantages and disadvantages and the machine performance and availability are discussed.

  20. SAFARI 2000 MODIS MOD04_L2 Aerosol Data, GRANT Format, for Southern Africa

    Data.gov (United States)

    National Aeronautics and Space Administration — The subset of the MODIS MOD04_L2 aerosol product provided in this data set represents the swaths that coincide with known times of the South African Weather...

  1. SAFARI 2000 MODIS MOD04_L2 Aerosol Data, GRANT Format, for Southern Africa

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: The subset of the MODIS MOD04_L2 aerosol product provided in this data set represents the swaths that coincide with known times of the South African...

  2. Pulmonary Effects of Eight-Hour MK 16 MOD 1 Dives

    National Research Council Canada - National Science Library

    Shykoff, B

    2007-01-01

    ...) to those previously attained at 12 to 14 feet. Seventeen U.S. Navy divers dove underwater in the ascent tower at Navy Diving and Salvage Training Center with the MK 16 MOD 1 underwater breathing apparatus...

  3. Modèle multi-enroulements avec prise en compte des harmoniques ...

    African Journals Online (AJOL)

    Modèle multi-enroulements avec prise en compte des harmoniques d\\'espace de la machine asynchrone triphasée à cage en environnement MATLAB : Application à la simulation des moteurs avec défauts.

  4. Biomonitoring of genotoxic risk in radar facility workers: comparison of the comet assay with micronucleus assay and chromatid breakage assay

    International Nuclear Information System (INIS)

    Garaj-Vrhovac, V.; Kopjar, N.

    2003-01-01

    Genotoxic risks of occupational exposure in a radar facility were evaluated by using alkaline comet assay, micronucleus assay and chromatid breakage assay on peripheral blood leukocytes in exposed subjects and corresponding controls. Results show that occupational exposure to microwave radiation correlates with an increase of genome damage in somatic cells. The levels of DNA damage in exposed subjects determined by using alkaline comet assay were increased compared to control and showed interindividual variations. Incidence of micronuclei was also significantly increased compared to baseline control values. After short exposure of cultured lymphocytes to bleomycin, cells of occupationally exposed subjects responded with high numbers of chromatid breaks. Although the level of chromosome damage generated by bleomycin varied greatly between individuals, in exposed subjects a significantly elevated number of chromatid breaks was observed. Our results support data reported in literature indicating that microwave radiation represents a potential DNA-damaging hazard. Alkaline comet assay is confirmed as a sensitive and highly reproducible technique for detection of primary DNA damage inflicted in somatic cells. Micronucleus assay was confirmed as reliable bio-markers of effect and chromatid breakage assay as sensitive bio-marker of individual cancer susceptibility. The results obtained also confirm the necessity to improve measures and to perform accurate health surveillance of individuals occupationally exposed to microwave radiation

  5. Modélisation et simulation par la méthode des volumes finis des ...

    African Journals Online (AJOL)

    La discrétisation a été faite après l'utilisation des coordonnées curvilignes en convertissant le domaine physique en domaine de calcul rectangulaire et le modèle mathématique sera donc basé sur les équations en coordonnées curvilignes. La comparaison des résultats obtenus avec le modèle mathématique et les ...

  6. Twenty Years of Research on the Alcator C-Mod Tokamak

    Science.gov (United States)

    Greenwald, Martin

    2013-10-01

    Alcator C-Mod is a compact, high-field tokamak, whose unique design and operating parameters have produced a wealth of new and important results since its start in 1993, contributing data that extended tests of critical physical models into new parameter ranges and into new regimes. Using only RF for heating and current drive with innovative launching structures, C-Mod operates routinely at very high power densities. Research highlights include direct experimental observation of ICRF mode-conversion, ICRF flow drive, demonstration of Lower-Hybrid current drive at ITER-like densities and fields and, using a set of powerful new diagnostics, extensive validation of advanced RF codes. C-Mod spearheaded the development of the vertical-target divertor and has always operated with high-Z metal plasma facing components--an approach adopted for ITER. C-Mod has made ground-breaking discoveries in divertor physics and plasma-material interactions at reactor-like power and particle fluxes and elucidated the critical role of cross-field transport in divertor operation, edge flows and the tokamak density limit. C-Mod developed the I-mode and EDA H-mode regimes which have high performance without large ELMs and with pedestal transport self-regulated by short-wavelength electromagnetic waves. C-Mod has carried out pioneering studies of intrinsic rotation and found that self-generated flow shear can be strong enough to significantly modify transport. C-Mod made the first quantitative link between pedestal temperature and H-mode performance, showing that the observed self-similar temperature profiles were consistent with critical-gradient-length theories and followed up with quantitative tests of nonlinear gyrokinetic models. Disruption studies on C-Mod provided the first observation of non-axisymmetric halo currents and non-axisymmetric radiation in mitigated disruptions. Work supported by U.S. DoE

  7. Primes of the form x2 + dy2 with x ≡ 0(mod N)

    Indian Academy of Sciences (India)

    A Mersenne prime Mp = 2p −1 is a quadratic residue of 7 if and only if p ≡ 1(mod 3). In such cases Mp ≡ 1(mod 7) ... if the norm of Mp,α is a rational prime, then Mp,α is a quadratic residue of 7. Then it is proved that, for ..... [13] Vaugham T P, The construction of unramified cyclic quartic extension of Q(. √ m),. Math. Comput.

  8. HumMod: A Modeling Environment for the Simulation of Integrative Human Physiology

    OpenAIRE

    Hester, Robert L.; Brown, Alison J.; Husband, Leland; Iliescu, Radu; Pruett, Drew; Summers, Richard; Coleman, Thomas G.

    2011-01-01

    Mathematical models and simulations are important tools in discovering key causal relationships governing physiological processes. Simulations guide and improve outcomes of medical interventions involving complex physiology. We developed HumMod, a Windows-based model of integrative human physiology. HumMod consists of 5000 variables describing cardiovascular, respiratory, renal, neural, endocrine, skeletal muscle and metabolic physiology. The model is constructed from empirical data obtained ...

  9. NetMOD version 1.0 user's manual

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion John [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2014-01-01

    NetMOD (Network Monitoring for Optimal Detection) is a Java-based software package for conducting simulation of seismic networks. Specifically, NetMOD simulates the detection capabilities of seismic monitoring networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This manual describes how to configure and operate NetMOD to perform seismic detection simulations. In addition, NetMOD is distributed with a simulation dataset for the Comprehensive Nuclear-Test-Ban Treaty Organization (CTBTO) International Monitoring System (IMS) seismic network for the purpose of demonstrating NetMOD's capabilities and providing user training. The tutorial sections of this manual use this dataset when describing how to perform the steps involved when running a simulation.

  10. Assessment and improvement of condensation models in RELAP5/MOD3.2

    Energy Technology Data Exchange (ETDEWEB)

    Choi, Ki Yong; Park, Hyun Sik; Kim, Sang Jae; No, Hee Chen [Korea Advanced Institute of Science and Technology, Taejon (Korea, Republic of)

    1997-12-31

    The condensation models in the standard RELAP5/MOD3.2 code are assessed and improved based on the database, which is constructed from the previous experimental data on various condensation phenomena. The default model of the laminar film condensation in RELAP5/MOD3.2 does not give any reliable predictions, and its alternative model always predicts higher values than the experimental data. Therefore, it is needed to develop a new correlation based on the experimental data of various operating ranges in the constructed database. The Shah correlation, which is used to calculate the turbulent film condensation heat transfer coefficients in the standard RELAP5/MOD3.2, well predicts the experimental data in the database. The horizontally stratified condensation model of RELAP5/MOD3.2 overpredicts both cocurrent and countercurrent experimental data. The correlation proposed by H.J.Kim predicts the database relatively well compared with that of RELAP6/MOD3.2. The RELAP5/MOD3.2 model should use the liquid velocity for the calculation of the liquid Reynolds number and be modified to consider the effects of the gas velocity and the film thickness. 2 refs., 5 figs., 1 tab. (Author)

  11. NetMOD Version 2.0 User?s Manual.

    Energy Technology Data Exchange (ETDEWEB)

    Merchant, Bion J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-10-01

    NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydracoustic, and infrasonic networks. Specifically, NetMOD simulates the detection capabilities of monitoring networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This manual describes how to configure and operate NetMOD to perform detection simulations. In addition, NetMOD is distributed with simulation datasets for the Comprehensive Nuclear-Test-Ban Treaty Organization (CTBTO) International Monitoring System (IMS) seismic, hydroacoustic, and infrasonic networks for the purpose of demonstrating NetMOD's capabilities and providing user training. The tutorial sections of this manual use this dataset when describing how to perform the steps involved when running a simulation. ACKNOWLEDGEMENTS We would like to thank the reviewers of this document for their contributions.

  12. Antimycobacterial susceptibility testing methods for natural products research

    Directory of Open Access Journals (Sweden)

    Juan Gabriel Bueno Sánchez

    2010-06-01

    Full Text Available The emergence of multidrug-resistant strains of Mycobacterium tuberculosis underscores the need of continuous developments on new and efficient methods to determine the susceptibility of isolates of M. tuberculosis in the search for novel antimicrobial agents. Natural products constitute an important source of new drugs, but design and implementation of antimycobacterial susceptibility testing methods are necessary for evaluate the different extracts and compounds. A number of biological assay methodologies are in current use, ranging from the classical disk diffusion and broth dilution assay format, to radiorespirometric (BACTEC, dye-based, and fluorescent/luminescence reporter assays. This review presents an analysis on the in vitro susceptibility testing methods developed for determinate antitubercular activity in natural products and related compounds (semi-synthetic natural products and natural products-derived compounds and the criteria to select the adequate method for determination of biological activity of new natural products.

  13. A fast, simple method for screening radiation susceptibility genes by RNA interference

    International Nuclear Information System (INIS)

    Tsuji, Atsushi B.; Sudo, Hitomi; Sugyo, Aya; Otsuki, Marika; Miyagishi, Makoto; Taira, Kazunari; Imai, Takashi; Harada, Yoshi-nobu

    2005-01-01

    Radiotherapy can cause unacceptable levels of damage to normal tissues in some cancer patients. To understand the molecular mechanisms underlying radiation-induced physiological responses, and to be able to predict the radiation susceptibility of normal tissues in individual patients, it is important to identify a comprehensive set of genes responsible for radiation susceptibility. We have developed a simple and rapid 96-well screening protocol using cell proliferation assays and RNA interference to identify genes associated with radiation susceptibility. We evaluated the performance of alamarBlue-, BrdU-, and sulforhodamine B-based cell proliferation assays using the 96-well format. Each proliferation assay detected the known radiation susceptibility gene, PRKDC. In a trial screen using 28 shRNA vectors, another known gene, CDKN1A, and one new radiation susceptibility gene, ATP5G3, were identified. Our results indicate that this method may be useful for large-scale screens designed to identify novel radiation susceptibility genes

  14. Superstructure for a super tokamak: Alcator C-MOD

    International Nuclear Information System (INIS)

    Ballinger, R.; Becker, H.; Hwang, I.; Titus, P.; Fisher, K.; Werber, K.

    1989-01-01

    ALCATOR C-MOD is a compact high performance tokamak presently being constructed by the Massachusetts Institute of Technology under contract to the US Department of Energy. The purpose of the program is to study the production, confinement, heating, and control of strongly shaped, fully diverted, high density plasmas. The high toroidal magnetic field produces extremely large forces on the magnet conductors. Those loads are reacted by an external superstructure. The machine will be operated in a pulsed mode, with a design life of 50,000 cycles. That combination places exceptional requirements on the design, materials processing, and fabrication of the superstructure components. The superstructure consists of a large forged AISI 316LN pressure vessel that is assembled with alloy 718 fasteners. The chemistries and thermomechanical processing techniques were selected to provide the necessary mechanical properties at both room temperature and at the 77K operating temperature. This presentation addresses the superstructure design, stress analysis, materials processing, static and fatigue properties, components fabrication, and inspection. 13 refs., 2 tabs

  15. Stormløb mod grænsen

    DEFF Research Database (Denmark)

    Holm, Isak Winkel

    Franz Kafka blev berømt i årene efter Anden Verdenskrig, i skyggen af atomtruslen og det 20. århundredes totalitarisme. Dengang lå det lige for at fortolke hans forfatterskab som et budskab fra en "kafkask" verden hvor det magtesløse menneske uvægerligt må bukke under for meningsløse bureaukratiske...... magter. Men Kafkas litterære værker er ikke "kafkaske". Tværtimod drømte han lige fra sine tidligste år om en politisk begivenhed, om et mirakuløst øjeblik hvor menneskene ikke er passive ofre for uforanderlige skæbnemagter, men selvstændige aktører der er i stand til at rokke ved fundamenterne for det...... fælles liv. Kafka beskrev selv sit forfatterskab som et stormløb mod grænsen. Hvis man tager ham på ordet, bliver opgaven at forstå hans værker som angreb, som litterære manøvrer der gennemføres for at ændre på den eksisterende tingenes orden. Hans værker er med andre ord ikke budskaber der fortæller om...

  16. Stormløb mod grænsen

    DEFF Research Database (Denmark)

    Holm, Isak Winkel

    Franz Kafkas forfatterskab blev berømt i årene efter Anden Verdenskrig, i skyggen af det korte 20. århundredes totalitarisme og atomtrussel, og i dette intellektuelle klima lå det lige for at fortolke hans litterære værker som en skildring af en skæbneagtig verden som det ikke står i menneskenes...... magt at forandre. Den meget velkendte forestilling om "det kafkaske" rummer en politisk ontologi, et grundlæggende billede af tingenes orden, der trækker en skarp grænse mellem det magtesløse enkeltmenneske og de meningsløse skæbnemagter. I Stormløb mod grænsen forsøger jeg at redde Kafka ud af den...... kolde krigs skygge ved at insistere på at det politiske spiller en afgørende rolle – ikke bare for værkernes indhold, men også for værkernes form. Kafkas litterære værker er ikke "kafkaske" i dette ords gængse betydning. Kafka forsøgte i en berømt dagbogsoptegnelse fra januar 1922, to år før sin død...

  17. Lower Hybrid Current Drive Experiments in Alcator C-Mod

    Energy Technology Data Exchange (ETDEWEB)

    J.R. Wilson, S. Bernabei, P. Bonoli, A. Hubbard, R. Parker, A. Schmidt, G. Wallace, J. Wright, and the Alcator C-Mod Team

    2007-10-09

    A Lower Hybrid Current Drive (LHCD) system has been installed on the Alcator C-MOD tokamak at MIT. Twelve klystrons at 4.6 GHz feed a 4x22 waveguide array. This system was designed for maximum flexibility in the launched parallel wave-number spectrum. This flexibility allows tailoring of the lower hybrid deposition under a variety of plasma conditions. Power levels up to 900 kW have been injected into the tokomak. The parallel wave number has been varied over a wide range, n|| ~ 1.6–4. Driven currents have been inferred from magnetic measurements by extrapolating to zero loop voltage and by direct comparison to Fisch-Karney theory, yielding an efficiency of n20IR/P ~ 0.3. Modeling using the CQL3D code supports these efficiencies. Sawtooth oscillations vanish, accompanied with peaking of the electron temperature (Te0 rises from 2.8 to 3.8 keV). Central q is inferred to rise above unity from the collapse of the sawtooth inversion radius, indicating off-axis cd as expected. Measurements of non-thermal x-ray and electron cyclotron emission confirm the presence of a significant fast electron population that varies with phase and plasma density. The x-ray emission is observed to be radialy broader than that predicted by simple ray tracing codes. Possible explanations for this broader emission include fast electron diffusion or broader deposition than simple ray tracing predictions (perhaps due to diffractive effects).

  18. Multi configuration axysimmetric plasma shaping control on RFX-mod

    Science.gov (United States)

    Cavazzana, R.; Finotti, C.; Marchiori, G.; Manduchi, G.; Zanotto, L.; Kudlacek, O.; Zuin, M.; Franz, P.; Zanca, P.; Marrelli, L.; Luce, T. C.; Jackson, G. L.

    2013-10-01

    RFX-mod is a flexible experiment, equipped with a full coverage MHD control system, composed by 192 (48 toroidal x 4 poloidal) coils. Being built as a high current RFP (a/R = 0.46m/2.0m; Ip max 2 MA) it has recently operated also as a low current circular tokamak (Bt = 0.45 T; Ip 85 kA @ q(a) ~ 3 ; Ip 150 kA @ q(a) ~ 2), achieving the full stabilization of m = 2, n = 1 mode at q(a) ~ 2. In order to extend the significance of MHD control experiments, there arose the need of creating non circular shaped discharges, exploiting the flexibility of the 16 shaping coils of the machine. Plasma of with moderate elliptical and triangular shape can be obtained both in tokamak and RFP configuration. Moreover tokamak D-shaped plasmas with double X-point have been obtained by proper reconfiguration of the power supply. The design structure and the experimental performance of the new shape reconstruction, plasma position and shape real-time control algorithms, tested in both RFP and tokamak configuration, are presented and discussed, along with some preliminary results of the MHD mode interaction and control behavior with the modified plasma shapes.

  19. Overview of recent Alcator C-Mod research

    International Nuclear Information System (INIS)

    Marmar, E.S.

    2002-01-01

    Experiments have been carried out to investigate the triggering and control of ITBs, using multiple frequency ICRF tools. It is found that the ITBs can be reliably triggered using off-axis ICRF minority heating; the addition of on-axis heating at a second frequency can be used for control of the particle transport, leading to quasi-steady operation. Cross-field particle transport in the SOL been shown to be very rapid in Alcator C-Mod usually dominating over the parallel transport into the divertor with very important implications for our understanding of particle recycling and ash removal. Detailed explorations of the quasi-coherent mode (QCM) that appears to be responsible for particle transport across the EDA H-mode barrier have revealed that the QCM has a magnetic component, and comparisons with MHD stability calculations are consistent with the hypothesis that it is due to a resistive ballooning instability. In preparation for long-pulse discharges which will be sustained non-inductively we have produced discharges up to 3 seconds in length confirming that all systems can be operated for at least 5-second shots, which corresponds to about 5 current relaxation times at 5 keV. (author)

  20. CONTEMPT4/MOD2: a multicompartment containment system analysis program

    International Nuclear Information System (INIS)

    Metcalfe, L.J.; Mings, W.J.; Hartman, J.E.; Crail, A.C.

    1978-02-01

    CONTEMPT4/MOD2 is a digital computer program, written in FORTRAN IV, which describes the behavior of multicompartment pressurized water reactor (PWR) containment systems and experimental containment systems subjected to postulated loss-of-coolant accident (LOCA) conditions. The program calculates the time variation of compartment pressures, temperatures, mass and energy inventories, heat structure temperature distributions, and intercompartment mass and energy exchange based on user-supplied values for compartment descriptions, time step and edit controls, and selected problem features. Analytical models available to describe containment systems include models for containment fans and pumps, cooling sprays, fan coolers, heat conducting structures, sump drain, and PWR ice condensers. Dynamic storage allocations (DSA) is used to limit the amount of computer core used for each problem. Optional automatic time step control allows the code to determine time step sizes within limits dictated by the user. Multicompartment capability (up to 999 individual compartments) and generalized, user-oriented input data descriptions permit improved flexibility over previous codes in the CONTEMPT series. Analytical model descriptions, input instructions, and sample problem results are presented

  1. CONTEMPT 4/MOD 3: a multicompartment containment system analysis program

    International Nuclear Information System (INIS)

    Cheng, T.C.; Metcalfe, L.J.; Hartman, J.E.; Mings, W.J.; Crail, A.C.

    1982-12-01

    CONTEMPT4/MOD3 is a digital computer program, written in FORTRAN IV, that describes the behavior of multicompartment pressurized water reactor (PWR) containment systems and experimental containment systems subjected to postulated loss-of-coolant accident (LOCA) conditons. The program calculates the time variation of compartment pressures, temperatures, mass and energy inventories, heat structure temperature distributions, and intercompartment mass and energy exchange based on user-supplied values for compartment descriptions, time step and edit controls, and selected problem features. Analytical models available to describe containment systems include models for containment fans and pumps, cooling sprays, fan coolers, heat-conducting structures, sump drains, and PWR ice condensers. Dynamic stroage allocation (DSA) is used to limit the amount of computer core used for each problem. Optional automatic time step control allows the code to determine time step sizes within limits dictated by the user. Multicompartment capability (up to 999 individual compartments) and generalized, user-oriented input-data descriptions permit improved flexibility over previous codes in the CONTEMPT series. Analytical model descriptions, input instructions, and sample problem results are presented

  2. A modified MOD16 algorithm to estimate evapotranspiration over alpine meadow on the Tibetan Plateau, China

    Science.gov (United States)

    Chang, Y.; Ding, Y.; Zhao, Q.; Zhang, S.

    2017-12-01

    The accurate estimation of evapotranspiration (ET) is crucial for managing water resources in areas with extreme climates affected by climate change, such as the Tibetan Plateau (TP). The MOD16 ET product has also been validated and applied in many countries with various climates, however, its performance varies under different climates and regions. Several have studied ET based on satellite-based models on the TP. However, only a few studies on the performance of MOD16 in the TP with heterogeneous land cover have been reported. This study proposes an improved algorithm for estimating ET based on a proposed modified MOD16 method over alpine meadow on the TP in China. Wind speed and vegetation height were integrated to estimate aerodynamic resistance, while the temperature and moisture constraint for stomatal conductance were revised based on the technique proposed by Fisher et al. (2008). Moreover, Fisher's method for soil evaporation was introduced to decrease the uncertainty of soil evaporation estimation. Five representative alpine meadow sites on the TP were selected to investigate the performance of the modified algorithm. Comparisons between ET observed using Eddy Covariance (EC) and estimated using both the original method and modified method suggest that the modified algorithm had better performance than the original MOD16 method. This result was achieved considering that the coefficient of determination (R2) increased from 0.28 to 0.70, and the root mean square error (RMSE) decreased from 1.31 to 0.77 mm d-1. The modified algorithm also outperformed on precipitation days compared to non-precipitation days at Suli and Hulugou sites, while it performed well for both non-precipitation and precipitation days at Tanggula site. Comparisons of the 8-day ET estimation using the MOD16 product, original MOD16 method, and modified MOD16 method with observed ET suggest that MOD16 product underestimated ET over the alpine meadow of the TP during the growing season

  3. Sur la modélisation des supraconducteurs : le ``modèle de l'état critique'' de Bean, en trois dimensions

    Science.gov (United States)

    Bossavit, A.

    1993-03-01

    Macroscopic modelling of superconductors demands a substitution of some nonlinear behavior law for Ohm's law. For this, a version of Bean's “critical state” model, derived from the setting of a convex functional of the current density field, valid in dimension 3 without any previous assumption about the direction of currents, is proposed. It is shown how two standard three-dimensional finite element methods (“h-formulation” and “e-formulation”), once fitted with this model, can deal with situations were superconductors are present. La modélisation macroscopique des supraconducteurs suppose le remplacement de la loi d'Ohm par une loi de comportement non linéaire adéquate. On présente à cet effet une version du “modèle de Bean”, ou modèle de l'état critique, basée sur la construction d'une certaine fonctionnelle convexe du champ des densités de courant, qui est valable en dimension 3 sans hypothèses préalables sur la direction des courants. On montre comment adapter deux méthodes standards de calcul de courants de Foucault par élérnents finis en trois dimensions (“en h” et “en e”) à la présence de supraconducteurs, en incorporant ce modèle.

  4. Microbead agglutination based assays

    KAUST Repository

    Kodzius, Rimantas

    2013-01-21

    We report a simple and rapid room temperature assay for point-of-care (POC) testing that is based on specific agglutination. Agglutination tests are based on aggregation of microbeads in the presence of a specific analyte thus enabling the macroscopic observation. Such tests are most often used to explore antibody-antigen reactions. Agglutination has been used for protein assays using a biotin/streptavidin system as well as a hybridization based assay. The agglutination systems are prone to selftermination of the linking analyte, prone to active site saturation and loss of agglomeration at high analyte concentrations. We investigated the molecular target/ligand interaction, explaining the common agglutination problems related to analyte self-termination, linkage of the analyte to the same bead instead of different microbeads. We classified the agglutination process into three kinds of assays: a two- component assay, a three-component assay and a stepped three- component assay. Although we compared these three kinds of assays for recognizing DNA and protein molecules, the assay can be used for virtually any molecule, including ions and metabolites. In total, the optimized assay permits detecting analytes with high sensitivity in a short time, 5 min, at room temperature. Such a system is appropriate for POC testing.

  5. HumMod: A Modeling Environment for the Simulation of Integrative Human Physiology.

    Science.gov (United States)

    Hester, Robert L; Brown, Alison J; Husband, Leland; Iliescu, Radu; Pruett, Drew; Summers, Richard; Coleman, Thomas G

    2011-01-01

    Mathematical models and simulations are important tools in discovering key causal relationships governing physiological processes. Simulations guide and improve outcomes of medical interventions involving complex physiology. We developed HumMod, a Windows-based model of integrative human physiology. HumMod consists of 5000 variables describing cardiovascular, respiratory, renal, neural, endocrine, skeletal muscle, and metabolic physiology. The model is constructed from empirical data obtained from peer-reviewed physiological literature. All model details, including variables, parameters, and quantitative relationships, are described in Extensible Markup Language (XML) files. The executable (HumMod.exe) parses the XML and displays the results of the physiological simulations. The XML description of physiology in HumMod's modeling environment allows investigators to add detailed descriptions of human physiology to test new concepts. Additional or revised XML content is parsed and incorporated into the model. The model accurately predicts both qualitative and quantitative changes in clinical and experimental responses. The model is useful in understanding proposed physiological mechanisms and physiological interactions that are not evident, allowing one to observe higher level emergent properties of the complex physiological systems. HumMod has many uses, for instance, analysis of renal control of blood pressure, central role of the liver in creating and maintaining insulin resistance, and mechanisms causing orthostatic hypotension in astronauts. Users simulate different physiological and pathophysiological situations by interactively altering numerical parameters and viewing time-dependent responses. HumMod provides a modeling environment to understand the complex interactions of integrative physiology. HumMod can be downloaded at http://hummod.org.

  6. HumMod: A modeling environment for the simulation of integrative human physiology

    Directory of Open Access Journals (Sweden)

    Robert eHester

    2011-04-01

    Full Text Available Mathematical models and simulations are important tools in discovering key causal relationships governing physiological processes. Simulations guide and improve outcomes of medical interventions involving complex physiology. We developed HumMod, a Windows-based model of integrative human physiology. HumMod consists of 5000 variables describing cardiovascular, respiratory, renal, neural, endocrine, skeletal muscle and metabolic physiology. The model is constructed from empirical data obtained from peer-reviewed physiological literature. All model details, including variables, parameters and quantitative relationships, are described in Extensible Markup Language (XML files. The executable (HumMod.exe parses the XML and displays the results of the physiological simulations. The XML description of physiology in HumMod¹s modeling environment allows investigators to add detailed descriptions of human physiology to test new concepts. Additional or revised XML content is parsed and incorporated into the model. The model accurately predicts both qualitative and quantitative changes in clinical and experimental responses. The model is useful in understanding proposed physiological mechanisms and physiological interactions that are not evident, allowing one to observe higher level emergent properties of the complex physiological systems. HumMod has many uses, for instance, analysis of renal control of blood pressure, central role of the liver in creating and maintaining insulin resistance, and mechanisms causing orthostatic hypotension in astronauts. Users simulate different physiological and pathophysiological situations by interactively altering numerical parameters and viewing time-dependent responses. HumMod provides a modeling environment to understand the complex interactions of integrative physiology. HumMod can be downloaded at http://hummod.org

  7. Une comparaison de logiciels d'optimisation sur une large collection de modèles graphiques

    OpenAIRE

    Allouche, David; De Givry, Simon; Hurley, Barry; KATSIRELOS, Georgios; O'Sullivan, Barry; Schiex, Thomas

    2014-01-01

    Le cadre des mod eles graphiques a variables discr etes permet de mod eliser des probl emes d'optimisation NP- diffi ciles pour lesquels la fonction objectif se factorise en un ensemble de fonctions locales. L'interpr etation graphique de ces mod eles est que chaque fonction est repr esent ee par une clique sur les variables de sa port ee. Les mod eles graphiques dits d eterministes ont pour objectif de minimiser la somme des fonctions locales, pouvant aussi être des contraintes si seuls les...

  8. ModFOLD6: an accurate web server for the global and local quality estimation of 3D protein models.

    Science.gov (United States)

    Maghrabi, Ali H A; McGuffin, Liam J

    2017-07-03

    Methods that reliably estimate the likely similarity between the predicted and native structures of proteins have become essential for driving the acceptance and adoption of three-dimensional protein models by life scientists. ModFOLD6 is the latest version of our leading resource for Estimates of Model Accuracy (EMA), which uses a pioneering hybrid quasi-single model approach. The ModFOLD6 server integrates scores from three pure-single model methods and three quasi-single model methods using a neural network to estimate local quality scores. Additionally, the server provides three options for producing global score estimates, depending on the requirements of the user: (i) ModFOLD6_rank, which is optimized for ranking/selection, (ii) ModFOLD6_cor, which is optimized for correlations of predicted and observed scores and (iii) ModFOLD6 global for balanced performance. The ModFOLD6 methods rank among the top few for EMA, according to independent blind testing by the CASP12 assessors. The ModFOLD6 server is also continuously automatically evaluated as part of the CAMEO project, where significant performance gains have been observed compared to our previous server and other publicly available servers. The ModFOLD6 server is freely available at: http://www.reading.ac.uk/bioinf/ModFOLD/. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

  9. Measurement of particle transport coefficients on Alcator C-Mod

    Energy Technology Data Exchange (ETDEWEB)

    Luke, T.C.T.

    1994-10-01

    The goal of this thesis was to study the behavior of the plasma transport during the divertor detachment in order to explain the central electron density rise. The measurement of particle transport coefficients requires sophisticated diagnostic tools. A two color interferometer system was developed and installed on Alcator C-Mod to measure the electron density with high spatial ({approx} 2 cm) and high temporal ({le} 1.0 ms) resolution. The system consists of 10 CO{sub 2} (10.6 {mu}m) and 4 HeNe (.6328 {mu}m) chords that are used to measure the line integrated density to within 0.08 CO{sub 2} degrees or 2.3 {times} 10{sup 16}m{sup {minus}2} theoretically. Using the two color interferometer, a series of gas puffing experiments were conducted. The density was varied above and below the threshold density for detachment at a constant magnetic field and plasma current. Using a gas modulation technique, the particle diffusion, D, and the convective velocity, V, were determined. Profiles were inverted using a SVD inversion and the transport coefficients were extracted with a time regression analysis and a transport simulation analysis. Results from each analysis were in good agreement. Measured profiles of the coefficients increased with the radius and the values were consistent with measurements from other experiments. The values exceeded neoclassical predictions by a factor of 10. The profiles also exhibited an inverse dependence with plasma density. The scaling of both attached and detached plasmas agreed well with this inverse scaling. This result and the lack of change in the energy and impurity transport indicate that there was no change in the underlying transport processes after detachment.

  10. Measurement of particle transport coefficients on Alcator C-Mod

    International Nuclear Information System (INIS)

    Luke, T.C.T.

    1994-10-01

    The goal of this thesis was to study the behavior of the plasma transport during the divertor detachment in order to explain the central electron density rise. The measurement of particle transport coefficients requires sophisticated diagnostic tools. A two color interferometer system was developed and installed on Alcator C-Mod to measure the electron density with high spatial (∼ 2 cm) and high temporal (≤ 1.0 ms) resolution. The system consists of 10 CO 2 (10.6 μm) and 4 HeNe (.6328 μm) chords that are used to measure the line integrated density to within 0.08 CO 2 degrees or 2.3 x 10 16 m -2 theoretically. Using the two color interferometer, a series of gas puffing experiments were conducted. The density was varied above and below the threshold density for detachment at a constant magnetic field and plasma current. Using a gas modulation technique, the particle diffusion, D, and the convective velocity, V, were determined. Profiles were inverted using a SVD inversion and the transport coefficients were extracted with a time regression analysis and a transport simulation analysis. Results from each analysis were in good agreement. Measured profiles of the coefficients increased with the radius and the values were consistent with measurements from other experiments. The values exceeded neoclassical predictions by a factor of 10. The profiles also exhibited an inverse dependence with plasma density. The scaling of both attached and detached plasmas agreed well with this inverse scaling. This result and the lack of change in the energy and impurity transport indicate that there was no change in the underlying transport processes after detachment

  11. Radioreceptor opioid assay

    International Nuclear Information System (INIS)

    Miller, R.J.; Chang, K.-J.

    1981-01-01

    A radioreceptor assay is described for assaying opioid drugs in biological fluids. The method enables the assay of total opioid activity, being specific for opioids as a class but lacking specificity within the class. A radio-iodinated opioid and the liquid test sample are incubated with an opiate receptor material. The percentage inhibition of the binding of the radio-iodinated compound to the opiate receptor is calculated and the opioid activity of the test liquid determined from a standard curve. Examples of preparing radio-iodinated opioids and assaying opioid activity are given. A test kit for the assay is described. Compared to other methods, this assay is cheap, easy and rapid. (U.K.)

  12. Absolute nuclear material assay

    Science.gov (United States)

    Prasad, Manoj K [Pleasanton, CA; Snyderman, Neal J [Berkeley, CA; Rowland, Mark S [Alamo, CA

    2010-07-13

    A method of absolute nuclear material assay of an unknown source comprising counting neutrons from the unknown source and providing an absolute nuclear material assay utilizing a model to optimally compare to the measured count distributions. In one embodiment, the step of providing an absolute nuclear material assay comprises utilizing a random sampling of analytically computed fission chain distributions to generate a continuous time-evolving sequence of event-counts by spreading the fission chain distribution in time.

  13. Absolute nuclear material assay

    Science.gov (United States)

    Prasad, Manoj K [Pleasanton, CA; Snyderman, Neal J [Berkeley, CA; Rowland, Mark S [Alamo, CA

    2012-05-15

    A method of absolute nuclear material assay of an unknown source comprising counting neutrons from the unknown source and providing an absolute nuclear material assay utilizing a model to optimally compare to the measured count distributions. In one embodiment, the step of providing an absolute nuclear material assay comprises utilizing a random sampling of analytically computed fission chain distributions to generate a continuous time-evolving sequence of event-counts by spreading the fission chain distribution in time.

  14. Tricyclic antidepressant radioreceptor assay

    International Nuclear Information System (INIS)

    Innis, R.B.; Tune, L.; Rock, R.; Depaulo, R.; U'Prichard, D.C.; Snyder, S.M.

    1979-01-01

    A receptor assay for tricyclic antidepressants described here is based on the ability of these drugs to compete with [ 3 H]-3-guinuclidnyl benzilate ( 3 H-QNB) for binding to muscarinic cholinergic receptors in rat brain membranes. The assay is sensitive, in that it can detect, for example, 2ng/ml nortriptyline in plasma. Seven plasma samples from depressed patients treated with nortriptyline were assayed with the radioreceptor and gas liquid chromatographic methods, and the results from these two methods were almost identical. This assay should be used cautiously, if at all, in patients treated with other drugs that have potent anticholinergic effects. (Auth.)

  15. 20 years of research on the Alcator C-Mod tokamak

    International Nuclear Information System (INIS)

    Greenwald, M.; Baek, S.; Barnard, H.; Beck, W.; Bonoli, P.; Brunner, D.; Burke, W.; Ennever, P.; Ernst, D.; Faust, I.; Fiore, C.; Fredian, T.; Gao, C.; Golfinopoulos, T.; Granetz, R.; Hartwig, Z.; Hubbard, A.; Hughes, J.; Hutchinson, I.; Irby, J.

    2014-01-01

    The object of this review is to summarize the achievements of research on the Alcator C-Mod tokamak [Hutchinson et al., Phys. Plasmas 1, 1511 (1994) and Marmar, Fusion Sci. Technol. 51, 261 (2007)] and to place that research in the context of the quest for practical fusion energy. C-Mod is a compact, high-field tokamak, whose unique design and operating parameters have produced a wealth of new and important results since it began operation in 1993, contributing data that extends tests of critical physical models into new parameter ranges and into new regimes. Using only high-power radio frequency (RF) waves for heating and current drive with innovative launching structures, C-Mod operates routinely at reactor level power densities and achieves plasma pressures higher than any other toroidal confinement device. C-Mod spearheaded the development of the vertical-target divertor and has always operated with high-Z metal plasma facing components—approaches subsequently adopted for ITER. C-Mod has made ground-breaking discoveries in divertor physics and plasma-material interactions at reactor-like power and particle fluxes and elucidated the critical role of cross-field transport in divertor operation, edge flows and the tokamak density limit. C-Mod developed the I-mode and the Enhanced Dα H-mode regimes, which have high performance without large edge localized modes and with pedestal transport self-regulated by short-wavelength electromagnetic waves. C-Mod has carried out pioneering studies of intrinsic rotation and demonstrated that self-generated flow shear can be strong enough in some cases to significantly modify transport. C-Mod made the first quantitative link between the pedestal temperature and the H-mode's performance, showing that the observed self-similar temperature profiles were consistent with critical-gradient-length theories and followed up with quantitative tests of nonlinear gyrokinetic models. RF research highlights include direct experimental

  16. 20 years of research on the Alcator C-Mod tokamaka)

    Science.gov (United States)

    Greenwald, M.; Bader, A.; Baek, S.; Bakhtiari, M.; Barnard, H.; Beck, W.; Bergerson, W.; Bespamyatnov, I.; Bonoli, P.; Brower, D.; Brunner, D.; Burke, W.; Candy, J.; Churchill, M.; Cziegler, I.; Diallo, A.; Dominguez, A.; Duval, B.; Edlund, E.; Ennever, P.; Ernst, D.; Faust, I.; Fiore, C.; Fredian, T.; Garcia, O.; Gao, C.; Goetz, J.; Golfinopoulos, T.; Granetz, R.; Grulke, O.; Hartwig, Z.; Horne, S.; Howard, N.; Hubbard, A.; Hughes, J.; Hutchinson, I.; Irby, J.; Izzo, V.; Kessel, C.; LaBombard, B.; Lau, C.; Li, C.; Lin, Y.; Lipschultz, B.; Loarte, A.; Marmar, E.; Mazurenko, A.; McCracken, G.; McDermott, R.; Meneghini, O.; Mikkelsen, D.; Mossessian, D.; Mumgaard, R.; Myra, J.; Nelson-Melby, E.; Ochoukov, R.; Olynyk, G.; Parker, R.; Pitcher, S.; Podpaly, Y.; Porkolab, M.; Reinke, M.; Rice, J.; Rowan, W.; Schmidt, A.; Scott, S.; Shiraiwa, S.; Sierchio, J.; Smick, N.; Snipes, J. A.; Snyder, P.; Sorbom, B.; Stillerman, J.; Sung, C.; Takase, Y.; Tang, V.; Terry, J.; Terry, D.; Theiler, C.; Tronchin-James, A.; Tsujii, N.; Vieira, R.; Walk, J.; Wallace, G.; White, A.; Whyte, D.; Wilson, J.; Wolfe, S.; Wright, G.; Wright, J.; Wukitch, S.; Zweben, S.

    2014-11-01

    The object of this review is to summarize the achievements of research on the Alcator C-Mod tokamak [Hutchinson et al., Phys. Plasmas 1, 1511 (1994) and Marmar, Fusion Sci. Technol. 51, 261 (2007)] and to place that research in the context of the quest for practical fusion energy. C-Mod is a compact, high-field tokamak, whose unique design and operating parameters have produced a wealth of new and important results since it began operation in 1993, contributing data that extends tests of critical physical models into new parameter ranges and into new regimes. Using only high-power radio frequency (RF) waves for heating and current drive with innovative launching structures, C-Mod operates routinely at reactor level power densities and achieves plasma pressures higher than any other toroidal confinement device. C-Mod spearheaded the development of the vertical-target divertor and has always operated with high-Z metal plasma facing components—approaches subsequently adopted for ITER. C-Mod has made ground-breaking discoveries in divertor physics and plasma-material interactions at reactor-like power and particle fluxes and elucidated the critical role of cross-field transport in divertor operation, edge flows and the tokamak density limit. C-Mod developed the I-mode and the Enhanced Dα H-mode regimes, which have high performance without large edge localized modes and with pedestal transport self-regulated by short-wavelength electromagnetic waves. C-Mod has carried out pioneering studies of intrinsic rotation and demonstrated that self-generated flow shear can be strong enough in some cases to significantly modify transport. C-Mod made the first quantitative link between the pedestal temperature and the H-mode's performance, showing that the observed self-similar temperature profiles were consistent with critical-gradient-length theories and followed up with quantitative tests of nonlinear gyrokinetic models. RF research highlights include direct experimental

  17. PReMod: a database of genome-wide mammalian cis-regulatory module predictions.

    Science.gov (United States)

    Ferretti, Vincent; Poitras, Christian; Bergeron, Dominique; Coulombe, Benoit; Robert, François; Blanchette, Mathieu

    2007-01-01

    We describe PReMod, a new database of genome-wide cis-regulatory module (CRM) predictions for both the human and the mouse genomes. The prediction algorithm, described previously in Blanchette et al. (2006) Genome Res., 16, 656-668, exploits the fact that many known CRMs are made of clusters of phylogenetically conserved and repeated transcription factors (TF) binding sites. Contrary to other existing databases, PReMod is not restricted to modules located proximal to genes, but in fact mostly contains distal predicted CRMs (pCRMs). Through its web interface, PReMod allows users to (i) identify pCRMs around a gene of interest; (ii) identify pCRMs that have binding sites for a given TF (or a set of TFs) or (iii) download the entire dataset for local analyses. Queries can also be refined by filtering for specific chromosomal regions, for specific regions relative to genes or for the presence of CpG islands. The output includes information about the binding sites predicted within the selected pCRMs, and a graphical display of their distribution within the pCRMs. It also provides a visual depiction of the chromosomal context of the selected pCRMs in terms of neighboring pCRMs and genes, all of which are linked to the UCSC Genome Browser and the NCBI. PReMod: http://genomequebec.mcgill.ca/PReMod.

  18. RELAP5/MOD2 calculation of OECD LOFT test LP-FW-01

    International Nuclear Information System (INIS)

    Croxfod, M.G.; Harwood, C.; Hall, P.C.

    1992-04-01

    RELAP5/MOD2 is being used by GDCD for calculation of certain small break loss-of-coolant accidents and pressurized transients in the Sizewell ''B'' PWR. To test the ability of RELAP5/MOD2 to model the primary feed-and-bleed recovery procedure following a complete loss- of-feedwater event, post test calculations have been carried out of OECD LOFT test LP-FW-01. This report describes the comparison between the code calculations and the test data. It is found that although the standard version of RELAP5/MOD2 gives a reasonable prediction of the experimental transient, the long term pressure history is better calculated with a modified code version containing a revised horizontal stratification entrainment model. The latter allows an improved calculation of entrainment of liquid from the hot leg into the surge line. RELAP5/MOD2 is found to give a more accurate simulation of the experimental transient than was achieved in previous UK studies using RETRAN-02/MOD2

  19. Disruption Warning Database Development and Exploratory Machine Learning Studies on Alcator C-Mod

    Science.gov (United States)

    Montes, Kevin; Rea, Cristina; Granetz, Robert

    2017-10-01

    A database of about 1800 shots from the 2015 campaign on the Alcator C-Mod tokamak is assembled, including disruptive and non-disruptive discharges. The database consists of 40 relevant plasma parameters with data taken from 160k time slices. In order to investigate the possibility of developing a robust disruption prediction algorithm that is tokamak-independent, we focused machine learning studies on a subset of dimensionless parameters such as βp, n /nG , etc. The Random Forests machine learning algorithm provides insight on the available data set by ranking the relative importance of the input features. Its application on the C-Mod database, however, reveals that virtually no one parameter has more importance than any other, and that its classification algorithm has a low rate of successfully predicted samples, as well as poor false positive and false negative rates. Comparing the analysis of this algorithm on the C-Mod database with its application to a similar database on DIII-D, we conclude that disruption prediction may not be feasible on C-Mod. This conclusion is supported by empirical observations that most C-Mod disruptions are caused by radiative collapse due to molybdenum from the first wall, which happens on just a 1-2ms timescale. Supported by the US Dept. of Energy under DE-FC02-99ER54512 and DE-FC02-04ER54698.

  20. The molybdate-binding protein (ModA) of the plant pathogen Xanthomonas axonopodis pv. citri.

    Science.gov (United States)

    Balan, Andrea; Santacruz, Carolina P; Moutran, Alexandre; Ferreira, Rita C C; Medrano, Francisco J; Pérez, Carlos A; Ramos, Carlos H I; Ferreira, Luís C S

    2006-12-01

    The modABC operon of phytopathogen Xanthomonas axonopodis pv. citri (X. citri) encodes a putative ABC transporter involved in the uptake of the molybdate and tungstate anions. Sequence analyses showed high similarity values of ModA orthologs found in X. campestris pv. campestris (X. campestris) and Escherichia coli. The X. citri modA gene was cloned in pET28a and the recombinant protein, expressed in the E. coli BL21 (DE3) strain, purified by immobilized metal affinity chromatography. The purified protein remained soluble and specifically bound molybdate and tungstate with K(d) 0.29+/-0.12 microM and 0.58+/-0.14 microM, respectively. Additionally binding of molybdate drastically enhanced the thermal stability of the recombinant ModA as compared to the apoprotein. This is the first characterization of a ModA ortholog expressed by a phytopathogen and represents an important tool for functional, biochemical and structural analyses of molybdate transport in Xanthomonas species.

  1. Susceptibility of pathogenic and nonpathogenic Naegleria ssp

    Energy Technology Data Exchange (ETDEWEB)

    Whiteman, L.Y.

    1988-01-01

    The susceptibility of four species of Naegleria amoebae to complement-mediated lysis was determined. The amoebicidal activity of normal human serum (NHS) and normal guinea pig serum (NGPS) for Naegleria amoebae was measured by an in vitro cytotoxicity assay. Release of radioactivity from amoebae labeled with {sup 3}H-uridine and visual observation with a compound microscope were used as indices of lysis. Susceptibility or resistance to complement-mediated lysis in vitro correlated with the in vivo pathogenic potential. Nonpathogenic Naegleria amoebae were lysed at a faster rate and at higher cell concentrations than were pathogenic amoebae. Electrophoretic analysis of NHS incubated with pathogenic or nonpathogenic Naegleria spp. demonstrated that amoebae activate the complement cascade resulting in the production of C3 and C5 complement cleavage products. Treatment with papain or trypsin for 1 h, but not with sialidase, increase the susceptibility of highly pathogenic, mouse-passaged N. fowleri to lysis. Treatment with actinomycin D, cycloheximide or various protease inhibitors for 4 h did not increase susceptibility to lysis. Neither a repair process involving de novo protein synthesis nor a complement-inactivating protease appear to account for the increase resistance of N. fowleri amoebae to complement-mediated lysis. A binding study with {sup 125}I radiolabeled C9 indicated that the terminal complement component does not remain stably bound to the membrane of pathogenic amoebae.

  2. Antimicrobial susceptibility profiles of oral Treponema species.

    Science.gov (United States)

    Okamoto-Shibayama, Kazuko; Sekino, Jin; Yoshikawa, Kouki; Saito, Atsushi; Ishihara, Kazuyuki

    2017-12-01

    Treponemes occur in the microflora of the dental plaque. Certain Treponema species that are frequently isolated from chronic periodontitis lesions are involved in its initiation and progression. In addition to mechanical instrumentation, antimicrobial agents are used as an adjunctive treatment modality for periodontitis. Despite its importance for successful antimicrobial treatment, information about susceptibility is limited for Treponema species. The aim of this study was to assess the susceptibility of Treponema denticola strains, Treponema socranskii, and Treponema vincentii to eleven antimicrobial agents. The minimum inhibitory and minimum bactericidal concentrations of these antimicrobial agents revealed strain-specific variation. Doxycycline, minocycline, azithromycin, and erythromycin were effective against all Treponema species tested in this study, whereas fluoroquinolones only exhibited an equivalent effectiveness on T. socranskii. The susceptibility of one T. denticola strain, T. socranskii, and T. vincentii to kanamycin was influenced by prior exposure to aerobic conditions. The susceptibility to quinolone drugs varied among strains of T. denticola, although they share an amino acid sequence identity of greater than 99% for DNA gyrase (type II topoisomerase) subunit A. In addition, an ATP-binding cassette (ABC) transporter inhibitor assay for T. denticola indicated that the transport of quinolone drugs is partially related to this transporter, although there may be parallel transport mechanisms. Our results provide important insights into antimicrobial agent-Treponema dynamics and establish a basis for developing an appropriate adjunctive therapy for periodontal disease. Copyright © 2017 Elsevier Ltd. All rights reserved.

  3. Fourie susceptible.pmd

    African Journals Online (AJOL)

    Prof. Adipala Ekwamu

    majority having adequate resistance. Teebus, Cerillos, Bonus and PAN 159 were most susceptible, with Mkuzi exhibiting highest levels of resistance. No correlation was obtained between disease rating and yield. Although a number of cultivars exhibited field resistance to halo blight and bacterial brown spot, all cultivars ...

  4. Dynamic susceptibility of nanopillars

    NARCIS (Netherlands)

    Dao, T.N.N.; Dao, N.; Donahue, M.J.; Dumitru, I.; Spinu, L.; Whittenburg, S.L.; Lodder, J.C.

    2004-01-01

    We have calculated the dynamic susceptibility of patterned cobalt and Permalloy pillars with a diameter of 50 nm and different pillar heights using micromagnetic simulations. The resonance modes obtained from these simulations are compared to the results obtained from an analytical solution of

  5. Genetic susceptibility of periodontitis

    NARCIS (Netherlands)

    Laine, M.L.; Crielaard, W.; Loos, B.G.

    2012-01-01

    In this systematic review, we explore and summarize the peer-reviewed literature on putative genetic risk factors for susceptibility to aggressive and chronic periodontitis. A comprehensive literature search on the PubMed database was performed using the keywords ‘periodontitis’ or ‘periodontal

  6. Endogenous Locus Reporter Assays.

    Science.gov (United States)

    Liu, Yaping; Hermes, Jeffrey; Li, Jing; Tudor, Matthew

    2018-01-01

    Reporter gene assays are widely used in high-throughput screening (HTS) to identify compounds that modulate gene expression. Traditionally a reporter gene assay is built by cloning an endogenous promoter sequence or synthetic response elements in the regulatory region of a reporter gene to monitor transcriptional activity of a specific biological process (exogenous reporter assay). In contrast, an endogenous locus reporter has a reporter gene inserted in the endogenous gene locus that allows the reporter gene to be expressed under the control of the same regulatory elements as the endogenous gene, thus more accurately reflecting the changes seen in the regulation of the actual gene. In this chapter, we introduce some of the considerations behind building a reporter gene assay for high-throughput compound screening and describe the methods we have utilized to establish 1536-well format endogenous locus reporter and exogenous reporter assays for the screening of compounds that modulate Myc pathway activity.

  7. Experiment data report for semiscale Mod-1 Test S-06-2 (LOFT counterpart test). [PWR

    Energy Technology Data Exchange (ETDEWEB)

    Patton, Jr., M. L.; Collins, B. L.; Sackett, K. E.

    1977-08-01

    Recorded test data are presented for Test S-06-2 of the Semiscale Mod-1 LOFT counterpart test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying an hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-06-2 was conducted from initial conditions of 15 513 kPa and 563 K to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the broken loop cold leg piping. During the test, cooling water was injected into the cold leg of the intact loop to simulate emergency core coolant injection in a PWR. The heater rods in the electrically heated core were operated at an axial peak power density which was 50% of the maximum peak power density (52.5 kW/m).

  8. Experiment data report for Semiscale Mod-1 Test S-05-1 (alternate ECC injection test)

    Energy Technology Data Exchange (ETDEWEB)

    Feldman, E. M.; Patton, Jr., M. L.; Sackett, K. E.

    1977-02-01

    Recorded test data are presented for Test S-05-1 of the Semiscale Mod-1 alternate ECC injection test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying a hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-05-1 was conducted from initial conditions of 2263 psia and 544/sup 0/F to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the cold leg broken loop piping. During the test, cooling water was injected into the vessel lower plenum to simulate emergency core coolant injection in a PWR, with the flow rate based on system volume scaling.

  9. Experiment data report for semiscale Mod-1 test S-06-1 (LOFT counterpart test). [PWR

    Energy Technology Data Exchange (ETDEWEB)

    Collins, B. L.; Patton, Jr., M. L.; Sackett, K. E.

    1977-07-01

    Recorded test data are presented for Test S-06-1 of the Semiscale Mod-1 LOFT counterpart test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying an hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-06-1 was conducted from initial conditions of 15 568 kPa and 564 K to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the broken loop cold leg piping. During the test, cooling water was injected into the cold leg of the intact loop to simulate emergency core coolant injection in a PWR. The heater rods in the electrically heated core were operated at an axial peak power density which was 30% of the maximum peak power density (52.5 kW/m).

  10. Experiment data report for semiscale Mod-1 test S-06-4 (LOFT counterpart test)

    Energy Technology Data Exchange (ETDEWEB)

    Gillins, R. L.; Sackett, K. E.; Coppin, C. E.

    1977-12-01

    Recorded test data are presented for Test S-06-4 of the Semiscale Mod-1 LOFT counterpart test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying a hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-06-4 was conducted from initial conditions of 15,653 kPa and 564 K to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the broken loop cold leg piping. During the test, cooling water was injected into the cold leg of the intact loop to simulate emergency core coolant injection in a PWR. The heater rods in the electrically heated core were operated at an axial peak power density which was 100 percent of the maximum peak power density (52.5 kW/m).

  11. Modèles Continus. Calculs. Algorithmique Distribuée.

    OpenAIRE

    Bournez, Olivier

    2006-01-01

    Les systèmes dynamiques continus permettent de modéliser de nombreuxsystèmes physiques, biologiques, ou issus de l'informatiquedistribuée. Nous nous intéressons à leur pouvoir de modélisation, et àleurs propriétés en tant que systèmes de calculs, et plus généralementaux propriétés calculatoires des modèles continus.Les deux premiers chapitres ne visent pas à produire des résultatsnouveaux, mais à motiver ce travail, et à le mettre enperspectives. Le chapitre 3 constitue un survol. Les chapitr...

  12. Modélisation de la turbidité en Baie de Bourgneuf (France)

    OpenAIRE

    Dussauze , Morgan; Sanchez , Martin; Barillé , Laurent; Hitier , Benoist; Oger-Jeanneret , Hélène; Robin , Marc

    2009-01-01

    International audience; Un modèle numérique est mis en place afin de modéliser la turbidité en Baie de Bourgneuf (France) à partir d'une couverture réaliste de sédiments fins. Trois agents hydrodynamiques sont pris en compte : les courants de marée ; la houle se propageant des grandes profondeurs vers la côte et le clapot généré localement par le vent. Cette modélisation permet de représenter le gradient Nord/Sud de turbidité, et les rapides changements de turbidité qui sont mesurés au niveau...

  13. Radon transport modelling: User's guide to RnMod3d

    DEFF Research Database (Denmark)

    Andersen, Claus Erik

    2000-01-01

    decay, diffusion and advection of radon can be solved. Moisture is included in the model, and partitioning ofradon between air, water and soil grains (adsorption) is taken into account. Most parameters can change in time and space, and transport parameters (diffusivity and permeability) may......RnMod3d is a numerical computer model of soil-gas and radon transport in porous media. It can be used, for example, to study radon entry from soil into houses in response to indoor-outdoor pressure differences or changes in atmospheric pressure. It canalso be used for flux calculations of radon...... be anisotropic. This guide includes benchmark tests based on simpleproblems with known solutions. RnMod3d has also been part of an international model intercomparison exercise based on more complicated problems without known solutions. All tests show that RnMod3d gives results of good quality....

  14. Reliability of mutagen sensitivity assay: an inter-laboratory comparison.

    Science.gov (United States)

    Erdei, Esther; Lee, Sang-Joon; Wei, Qingyi; Wang, Li-E; Song, Yan-S; Bovbjerg, Dana; Berwick, Marianne

    2006-07-01

    Mutagen sensitivity is regarded as a genetic susceptibility phenotype for various cancers; it is cytogenetically based and probably involves a number of genes from different DNA repair pathways. This assay has been used in a number of laboratories in the field of epidemiology, where it has been investigated and appears to be a useful susceptibility biomarker for epidemiological studies assessing cancer risks at the population level. One concern about phenotypic assays, such as the mutagen sensitivity assay, has been that there could be wide variation in results depending on the timing of the assay (within individual variation), the individual performing the assay (within observer variation) and the laboratory where the assay has been performed (inter-laboratory variation). We conducted an inter-laboratory comparison study between the Memorial Sloan-Kettering Cancer Center and M. D. Anderson, in which we assessed all these concerns. We did not find any significant variation in any of the assays. The correlation was high for all tests. The good concordance rate between laboratories supports the continued use of the mutagen sensitivity assay by different laboratories, and demonstrates its potential to identify at-risk subgroups among normal individuals and cancer patients alike.

  15. Mise en place d'une base de données pour une modélisation ...

    African Journals Online (AJOL)

    Mise en place d'une base de données pour une modélisation hydrologique distribuée du bassin versant du Bandama (Côte d'Ivoire) : apport d'un modèle numérique d'altitude, de la télédétection et du SIG Physitel.

  16. F-22 Increment 3.2B Modernization (F-22 Inc 3.2B Mod)

    Science.gov (United States)

    2015-12-01

    predecessor F - 22 software programs. Notes Delivery Order (DO) 0004 was issued under the overarching F - 22 Raptor , Enhancement, Development, and...Selected Acquisition Report (SAR) RCS: DD-A&T(Q&A)823-474 F - 22 Increment 3.2B Modernization ( F - 22 Inc 3.2B Mod) As of FY 2017 President’s Budget...Defense Acquisition Management Information Retrieval (DAMIR) March 23, 2016 16:11:54 UNCLASSIFIED F - 22 Inc 3.2B Mod December 2015 SAR March 23, 2016

  17. Assessment and improvement of condensation model in RELAP5/MOD3

    Energy Technology Data Exchange (ETDEWEB)

    Rho, Hui Cheon; Choi, Kee Yong; Park, Hyeon Sik; Kim, Sang Jae [Korea Advanced Institute of Science and Technology, Taejon (Korea, Republic of); Lee, Sang Il [Korea Power Engineering Co., Inc., Seoul (Korea, Republic of)

    1997-07-15

    The objective of this research is to remove the uncertainty of the condensation model through the assessment and improvement of the various heat transfer correlations used in the RELAP5/MOD3 code. The condensation model of the standard RELAP5/MOD3 code is systematically arranged and analyzed. A condensation heat transfer database is constructed from the previous experimental data on various condensation phenomena. Based on the constructed database, the condensation models in the code are assessed and improved. An experiment on the reflux condensation in a tube of steam generator in the presence of noncondensable gases is planned to acquire the experimental data.

  18. Autres modèles de prestation de services publics dans les ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Les écrits sur la prestation de services publics à l'aide de modèles différents ont porté jusqu'à maintenant sur des endroits très précis. Ils ont par ailleurs été circonscrits à des secteurs donnés et ont manqué d'uniformité sur le plan méthodologique. Ce projet vise à analyser les modèles de prestation de services de santé, ...

  19. Chromate Binding and Removal by the Molybdate-Binding Protein ModA.

    Science.gov (United States)

    Karpus, Jason; Bosscher, Michael; Ajiboye, Ifedayo; Zhang, Liang; He, Chuan

    2017-04-04

    Effective and cheap methods and techniques for the safe removal of hexavalent chromate from the environment are in increasingly high demand. High concentrations of hexavalent chromate have been shown to have numerous harmful effects on human biology. We show that the E. coli molybdate-binding protein ModA is a genetically encoded tool capable of removing chromate from aqueous solutions. Although previously reported to not bind chromate, we show that ModA binds chromate tightly and is capable of removing chromate to levels well below current US federal standards. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  20. Solid phase assays

    International Nuclear Information System (INIS)

    Reese, M.G.; Johnson, L.R.; Ransom, D.K.

    1980-01-01

    In a solid phase assay for quantitative determination of biological and other analytes, a sample such as serum is contacted with a receptor for the analyte being assayed, the receptor being supported on a solid support. No tracer for the analyte is added to the sample before contacting with the receptor; instead the tracer is contacted with the receptor after unbound analyte has been removed from the receptor. The assay can be otherwise performed in a conventional manner but can give greater sensitivity. (author)

  1. Estimation des paramètres de modèles pour la digestion anaérobie

    OpenAIRE

    Martinez , Ricardo

    2003-01-01

    La finalité de ce travail a été d'estimer de la meilleure manière possible des paramètres de différents modèles sur la respiration anaérobie. Dans un premier temps nous présentons les bases qu'on utilise pour construire les modèles du procédé biochimique. Puis nous faisons une analyse qualitative des modèles les plus connus sur le sujet. Dans un deuxième temps nous avons suggéré différents modèles, afin de mieux estimer les paramètres du modèle initial. Nous avons mis au point un programme d'...

  2. Comparisons of small ELM H-Mode regimes on the Alcator C-Mod and JFT-2M tokamaks

    International Nuclear Information System (INIS)

    Hubbard, A E; Kamiya, K; Oyama, N; Basse, N; Biewer, T; Edlund, E; Hughes, J W; Lin, L; Porkolab, M; Rowan, W; Snipes, J; Terry, J; Wolfe, S M

    2006-01-01

    Comparisons of H-mode regimes were carried out on the Alcator C-Mod and JFT-2M tokamaks. Shapes were matched apart from aspect ratio, which is lower on C-Mod. The high recycling steady H-mode on JFT-2M and enhanced D-alpha (EDA) regime on C-Mod, both of which feature very small or no ELMs, are found to have similar access conditions in q 95 - ν* space, occurring for pedestal collisionality ν* > 1. Differences in edge fluctuations were found, with lower frequencies but higher mode numbers on C-Mod. In both tokamaks an attractive regime with small ELMs on top of an enhanced D α baseline was obtained at moderate ν* and higher pressure. The JFT-2M shape favoured the appearance of ELMs on C-Mod and also resulted in the appearance of a lower frequency component of the quasicoherent mode during EDA

  3. Numerics and implementation of the UK horizontal stratification entrainment off-take model into RELAP5/MOD3. International Agreement Report

    Energy Technology Data Exchange (ETDEWEB)

    Bryce, W.M. [AEA Thermal Reactor Services, Winfrith (United Kingdom). Physics and Thermal Hydraulics

    1993-06-01

    This report presents the numerics and implementation details to add the same improved discharge quality correlations into RELAP5/MOD3. In the light of experience with the modified RELAP5/MOD2 code, some of the numerics has been slightly changed for RELAP5/MOD3. The description is quite detailed in order to facilitate change by some future code developer. A simple test calculation was performed to confirm the coding of the correlations implemented in RELAP5/MOD3.

  4. Genetic Susceptibility to Atherosclerosis

    Directory of Open Access Journals (Sweden)

    Sanja Kovacic

    2012-01-01

    Full Text Available Atherosclerosis is a complex multifocal arterial disease involving interactions of multiple genetic and environmental factors. Advances in techniques of molecular genetics have revealed that genetic ground significantly influences susceptibility to atherosclerotic vascular diseases. Besides further investigations of monogenetic diseases, candidate genes, genetic polymorphisms, and susceptibility loci associated with atherosclerotic diseases have been identified in recent years, and their number is rapidly increasing. This paper discusses main genetic investigations fields associated with human atherosclerotic vascular diseases. The paper concludes with a discussion of the directions and implications of future genetic research in arteriosclerosis with an emphasis on prospective prediction from an early age of individuals who are predisposed to develop premature atherosclerosis as well as to facilitate the discovery of novel drug targets.

  5. Marijuana Usage and Hypnotic Susceptibility

    Science.gov (United States)

    Franzini, Louis R.; McDonald, Roy D.

    1973-01-01

    Anonymous self-reported drug usage data and hypnotic susceptibility scores were obtained from 282 college students. Frequent marijuana users (more than 10 times) showed greater susceptibility to hypnosis than nonusers. (Author)

  6. Lateral flow assays.

    Science.gov (United States)

    Koczula, Katarzyna M; Gallotta, Andrea

    2016-06-30

    Lateral flow assays (LFAs) are the technology behind low-cost, simple, rapid and portable detection devices popular in biomedicine, agriculture, food and environmental sciences. This review presents an overview of the principle of the method and the critical components of the assay, focusing on lateral flow immunoassays. This type of assay has recently attracted considerable interest because of its potential to provide instantaneous diagnosis directly to patients. The range and interpretation of results and parameters used for evaluation of the assay will also be discussed. The main advantages and disadvantages of LFAs will be summarized and relevant future improvements to testing devices and strategies will be proposed. Finally, the major recent advances and future diagnostic applications in the LFA field will be explored. © 2016 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.

  7. Lateral flow assays

    Science.gov (United States)

    Koczula, Katarzyna M.

    2016-01-01

    Lateral flow assays (LFAs) are the technology behind low-cost, simple, rapid and portable detection devices popular in biomedicine, agriculture, food and environmental sciences. This review presents an overview of the principle of the method and the critical components of the assay, focusing on lateral flow immunoassays. This type of assay has recently attracted considerable interest because of its potential to provide instantaneous diagnosis directly to patients. The range and interpretation of results and parameters used for evaluation of the assay will also be discussed. The main advantages and disadvantages of LFAs will be summarized and relevant future improvements to testing devices and strategies will be proposed. Finally, the major recent advances and future diagnostic applications in the LFA field will be explored. PMID:27365041

  8. Origin of the diversity in DNA recognition domains in phasevarion associated modA genes of pathogenic Neisseria and Haemophilus influenzae.

    Science.gov (United States)

    Gawthorne, Jayde A; Beatson, Scott A; Srikhanta, Yogitha N; Fox, Kate L; Jennings, Michael P

    2012-01-01

    Phase variable restriction-modification (R-M) systems have been identified in a range of pathogenic bacteria. In some it has been demonstrated that the random switching of the mod (DNA methyltransferase) gene mediates the coordinated expression of multiple genes and constitutes a phasevarion (phase variable regulon). ModA of Neisseria and Haemophilus influenzae contain a highly variable, DNA recognition domain (DRD) that defines the target sequence that is modified by methylation and is used to define modA alleles. 18 distinct modA alleles have been identified in H. influenzae and the pathogenic Neisseria. To determine the origin of DRD variability, the 18 modA DRDs were used to search the available databases for similar sequences. Significant matches were identified between several modA alleles and mod gene from distinct bacterial species, indicating one source of the DRD variability was via horizontal gene transfer. Comparison of DRD sequences revealed significant mosaicism, indicating exchange between the Neisseria and H. influenzae modA alleles. Regions of high inter- and intra-allele similarity indicate that some modA alleles had undergone recombination more frequently than others, generating further diversity. Furthermore, the DRD from some modA alleles, such as modA12, have been transferred en bloc to replace the DRD from different modA alleles.

  9. Methodological Issues in Antifungal Susceptibility Testing of Malassezia pachydermatis

    Science.gov (United States)

    Peano, Andrea; Pasquetti, Mario; Tizzani, Paolo; Chiavassa, Elisa; Guillot, Jacques; Johnson, Elizabeth

    2017-01-01

    Reference methods for antifungal susceptibility testing of yeasts have been developed by the Clinical and Laboratory Standards Institute (CLSI) and the European Committee on Antibiotic Susceptibility Testing (EUCAST). These methods are intended to test the main pathogenic yeasts that cause invasive infections, namely Candida spp. and Cryptococcus neoformans, while testing other yeast species introduces several additional problems in standardization not addressed by these reference procedures. As a consequence, a number of procedures have been employed in the literature to test the antifungal susceptibility of Malassezia pachydermatis. This has resulted in conflicting results. The aim of the present study is to review the procedures and the technical parameters (growth media, inoculum preparation, temperature and length of incubation, method of reading) employed for susceptibility testing of M. pachydermatis, and when possible, to propose recommendations for or against their use. Such information may be useful for the future development of a reference assay. PMID:29371554

  10. GPCR-ModSim: A comprehensive web based solution for modeling G-protein coupled receptors.

    Science.gov (United States)

    Esguerra, Mauricio; Siretskiy, Alexey; Bello, Xabier; Sallander, Jessica; Gutiérrez-de-Terán, Hugo

    2016-07-08

    GPCR-ModSim (http://open.gpcr-modsim.org) is a centralized and easy to use service dedicated to the structural modeling of G-protein Coupled Receptors (GPCRs). 3D molecular models can be generated from amino acid sequence by homology-modeling techniques, considering different receptor conformations. GPCR-ModSim includes a membrane insertion and molecular dynamics (MD) equilibration protocol, which can be used to refine the generated model or any GPCR structure uploaded to the server, including if desired non-protein elements such as orthosteric or allosteric ligands, structural waters or ions. We herein revise the main characteristics of GPCR-ModSim and present new functionalities. The templates used for homology modeling have been updated considering the latest structural data, with separate profile structural alignments built for inactive, partially-active and active groups of templates. We have also added the possibility to perform multiple-template homology modeling in a unique and flexible way. Finally, our new MD protocol considers a series of distance restraints derived from a recently identified conserved network of helical contacts, allowing for a smoother refinement of the generated models which is particularly advised when there is low homology to the available templates. GPCR- ModSim has been tested on the GPCR Dock 2013 competition with satisfactory results. © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

  11. Influence of Substrate-Film Reactions on YBCO Grown by Fluorine-Free MOD Route

    DEFF Research Database (Denmark)

    Zhao, Yue; Tang, Xiao; Wu, W.

    2017-01-01

    Recently, fluorine-free metal organic deposition routes (FF-MOD) for growth of YBCO superconducting films have attracted increased attentions. In this paper, a comparison study was performed on the YBCO-Ag superconducting thin films deposited on two types substrates, LaAlO3 and CSD-Ce0.9La0.1O2-y...

  12. Modèles de gestion des ressources forestières du massif ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Expérimentation Participative et Adaptative de Modèles de Gestion des Ressources Forestières dans la Chaine Montagneuse de l'Atlas (Algérie, Maroc, Tunisie) : rapport final (17 mars 2009 au 18 septembre 2012). Download PDF. Reports. Unité de transformation de cire d'abeille (Commune de M'Sara). Download PDF ...

  13. Modélisation et simulation du fonctionnement réel des ...

    African Journals Online (AJOL)

    Les résultats, de fonctionnement de dispositifs réels, disponibles au sein du Laboratoire d'Energies Renouvelables (L.E.R ) ont permis de valider ces modèles [2]. ABSTRACT. Static converter systematic modelling is absolutely required to implement the optimum operating strategies of energy chains integrating "finite" ...

  14. Intervention rettet mod sproget hos børn med autisme

    DEFF Research Database (Denmark)

    Brynskov, Cecilia

    2014-01-01

    Sprogniveauet hos børn med autisme er afgørende for deres muligheder for udfoldelse og udvikling, og sproget er et udviklingsområde, der er meget modtageligt for intensiv intervention. Imidlertid modtager danske børn med autisme kun sjældent intensiv intervention rettet mod sproget. De intensive...

  15. Blob sizes and velocities in the Alcator C-Mod scrape-off layer

    DEFF Research Database (Denmark)

    Kube, R.; Garcia, O.E.; LaBombard, B.

    A new blob-tracking algorithm for the GPI diagnostic installed in the outboard-midplane of Alcator C-Mod is developed. I t tracks large-amplitude fluctuations propagating through the scrape-off layer and calculates blob sizes and velocities. We compare the results of this method to a blob velocity...

  16. Antimicrobial susceptibility patterns of Brazilian Haemophilus parasuis field isolates

    Directory of Open Access Journals (Sweden)

    Michela Miani

    Full Text Available ABSTRACT: Haemophilus parasuis is the etiological agent of Glässer’s disease (GD, an ubiquitous infection of swine characterized by systemic fibrinous polyserositis, polyarthritis and meningitis. Intensive use of antimicrobial agents in swine husbandries during the last years triggered the development of antibiotic resistances in bacterial pathogens. Thus, regular susceptibility testing is crucial to ensure efficacy of different antimicrobial agents to this porcine pathogen. In this study, 50 clinical isolates from South Brazilian pig herds were characterized and analyzed for their susceptibility to commonly used antibiotic. The identification and typing of clinical isolates was carried out by a modified indirect hemagglutination assay combined with a multiplex PCR. The susceptibility of each isolate was analyzed by broth microdilution method against a panel of 21 antimicrobial compounds. We found that field isolates are highly resistance to gentamycin, bacitracin, lincomycin and tiamulin, but sensitive to ampicillin, clindamycin, neomycin, penicillin, danofloxacin and enrofloxacin. Furthermore, an individual susceptibility analysis indicated that enrofloxacin is effective to treat clinical isolates with the exception of those classified as serovar 1. The results presented here firstly demonstrate the susceptibility of Brazilian clinical isolates of H. parasuis to antimicrobials widely used by swine veterinary practitioners and strengthen the need to perform susceptibility test prior to antibiotic therapy during GD outbreaks. In addition, because only six antimicrobial drugs (28.6% were found effective against field isolates, a continuous surveillance of the susceptibility profile should be of major concern to the swine industry.

  17. Assay method and compositions

    International Nuclear Information System (INIS)

    1977-01-01

    Methods are described for measuring catecholamine levels in human and animal body fluids and tissues using the catechol-O-methyl-transferase (COMT) radioassay. The assay involves incubating the biological sample with COMT and the tritiated methyl donor, S-adenosyl-L-methionine( 3 H)-methyl. The O-methylated ( 3 H) epinephrine and/or norepinephrine are extracted and oxidised to vanillin- 3 H which in turn is extracted and its radioactivity counted. When analysing dopamine levels the assay is extended by vanillin- 3 H and raising the pH of the aqueous periodate phase from which O-methylated ( 3 H) dopamine is extracted and counted. The assay may be modified depending on whether measurements of undifferentiated total endogenous catecholamine levels or differential analyses of the catecholamine levels are being performed. The sensitivity of the assay can be as low as 5 picograms for norepinephrine and epinephrine and 12 picograms for dopamine. The assemblance of the essential components of the assay into a kit for use in laboratories is also described. (U.K.)

  18. Detection of induced male germline mutation: Correlations and comparisons between traditional germline mutation assays, transgenic rodent assays and expanded simple tandem repeat instability assays

    International Nuclear Information System (INIS)

    Singer, Timothy M.; Lambert, Iain B.; Williams, Andrew; Douglas, George R.; Yauk, Carole L.

    2006-01-01

    Several rodent assays are capable of monitoring germline mutation. These include traditional assays, such as the dominant lethal (DL) assay, the morphological specific locus (SL) test and the heritable translocation (HT) assay, and two assays that have been developed more recently-the expanded simple tandem repeat (ESTR) and transgenic rodent (TGR) mutation assays. In this paper, we have compiled the limited amount of experimental data that are currently available to make conclusions regarding the comparative ability of the more recently developed assays to detect germline mutations induced by chemical and radiological agents. The data suggest that ESTR and TGR assays are generally comparable with SL in detecting germline mutagenicity induced by alkylating agents and radiation, though TGR offered less sensitivity than ESTR in some cases. The DL and HT assays detect clastogenic events and are most susceptible to mutations arising in post-spermatogonial cells, and they may not provide the best comparisons with TGR and ESTR instability. The measurement of induced ESTR instability represents a relatively sensitive method of identifying agents causing germline mutation in rodents, and may also be useful for bio-monitoring exposed individuals in the human population. Any future use of the TGR and ESTR germline mutation assays in a regulatory testing context will entail more robust and extensive characterization of assay performance. This will require substantially more data, including experiments measuring multiple endpoints, a greatly expanded database of chemical agents and a focus on characterizing stage-specific activity of mutagens in these assays, preferably by sampling epididymal sperm exposed at defined pre-meiotic, meiotic and post-meiotic stages of development

  19. Detection of induced male germline mutation: Correlations and comparisons between traditional germline mutation assays, transgenic rodent assays and expanded simple tandem repeat instability assays

    Energy Technology Data Exchange (ETDEWEB)

    Singer, Timothy M. [Mutagenesis Section, Environmental and Occupational Toxicology Division, Safe Environments Programme, 0803A, Health Canada, Ottawa, Ont., K1A 0K9 (Canada); Department of Biology, Carleton University, 1125 Colonel By Drive, Ottawa, Ont., K1S 5B6 (Canada); Lambert, Iain B. [Department of Biology, Carleton University, 1125 Colonel By Drive, Ottawa, Ont., K1S 5B6 (Canada); Williams, Andrew [Biostatistics and Epidemiology Division, Safe Environments Programme, 6604B, Health Canada, Ottawa, Ont., K1A 0K9 (Canada); Douglas, George R. [Mutagenesis Section, Environmental and Occupational Toxicology Division, Safe Environments Programme, 0803A, Health Canada, Ottawa, Ont., K1A 0K9 (Canada); Yauk, Carole L. [Mutagenesis Section, Environmental and Occupational Toxicology Division, Safe Environments Programme, 0803A, Health Canada, Ottawa, Ont., K1A 0K9 (Canada)]. E-mail: carole_yauk@hc-sc.gc.ca

    2006-06-25

    Several rodent assays are capable of monitoring germline mutation. These include traditional assays, such as the dominant lethal (DL) assay, the morphological specific locus (SL) test and the heritable translocation (HT) assay, and two assays that have been developed more recently-the expanded simple tandem repeat (ESTR) and transgenic rodent (TGR) mutation assays. In this paper, we have compiled the limited amount of experimental data that are currently available to make conclusions regarding the comparative ability of the more recently developed assays to detect germline mutations induced by chemical and radiological agents. The data suggest that ESTR and TGR assays are generally comparable with SL in detecting germline mutagenicity induced by alkylating agents and radiation, though TGR offered less sensitivity than ESTR in some cases. The DL and HT assays detect clastogenic events and are most susceptible to mutations arising in post-spermatogonial cells, and they may not provide the best comparisons with TGR and ESTR instability. The measurement of induced ESTR instability represents a relatively sensitive method of identifying agents causing germline mutation in rodents, and may also be useful for bio-monitoring exposed individuals in the human population. Any future use of the TGR and ESTR germline mutation assays in a regulatory testing context will entail more robust and extensive characterization of assay performance. This will require substantially more data, including experiments measuring multiple endpoints, a greatly expanded database of chemical agents and a focus on characterizing stage-specific activity of mutagens in these assays, preferably by sampling epididymal sperm exposed at defined pre-meiotic, meiotic and post-meiotic stages of development.

  20. Radioreceptor assay for insulin

    International Nuclear Information System (INIS)

    Suzuki, Kazuo

    1975-01-01

    Radioreceptor assay of insulin was discussed from the aspects of the measuring method, its merits and problems to be solved, and its clinical application. Rat liver 10 x g pellet was used as receptor site, and enzymatic degradation of insulin by the system contained in this fraction was inhibited by adding 1 mM p-CMB. 125 I-labelled porcine insulin was made by lactoperoxidase method under overnight incubation at 4 0 C and later purification by Sephadex G-25 column and Whatman CF-11 cellulose powder. Dog pancreatic vein serum insulin during and after the glucose load was determined by radioreceptor assay and radioimmunoassay resulting that both measurements accorded considerably. Radioreceptor assay would clarify the pathology of disorders of glucose metabolism including diabetes. (Tsukamoto, Y.)

  1. Rover waste assay system

    International Nuclear Information System (INIS)

    Akers, D.W.; Stoots, C.M.; Kraft, N.C.; Marts, D.J.

    1997-01-01

    The Rover Waste Assay System (RWAS) is a nondestructive assay system designed for the rapid assay of highly-enriched 235 U contaminated piping, tank sections, and debris from the Rover nuclear rocket fuel processing facility at the Idaho Chemical Processing Plant. A scanning system translates a NaI(Tl) detector/collimator system over the structural components where both relative and calibrated measurements for 137 Cs are made. Uranium-235 concentrations are in operation and is sufficiently automated that most functions are performed by the computer system. These functions include system calibration, problem identification, collimator control, data analysis, and reporting. Calibration of the system was done through a combination of measurements on calibration standards and benchmarked modeling. A description of the system is presented along with the methods and uncertainties associated with the calibration and analysis of the system for components from the Rover facility. 4 refs., 2 figs., 4 tabs

  2. A Comparison of Nuclear Power Plant Simulator with RELAP5/MOD3 code about Steam Generator Tube Rupture

    International Nuclear Information System (INIS)

    Kim, Sung Hyun; Moon, Chan Ki; Park, Sung Baek; Na, Man Gyun

    2013-01-01

    The RELAP5/MOD3 code introduced in cooperation with U. S. NRC has been utilized mainly for validation calculation of accident analysis submitted by licensee in Korea. The Korea Institute of Nuclear Safety has built a verification system of LWR accident analysis with RELAP5/MOD3 code engine. Therefore, the simulator replicates the design basis accident and its results are compared with RELAP5/MOD3 code results that will have important implications in the verification of the simulator in the future. The SGTR simulations were performed by the simulator and its results were compared with ones by RELAP5/MOD3 code in this study. Thus, the results of this study can be used as materials to build the verification system of the nuclear power plant simulator. We tried to compare with RELAP5/MOD3 verification code by replicating major parameters of steam generator tube rupture using the simulator for OPR-1000 in Yonggwang training center. By comparing the changes in temperature, pressure and inventory of the reactor coolant system and main steam system during the SGTR, it was confirmed that the main behaviors of SGTR which the simulator and RELAP5/MOD3 code showed are similar. However, the behavior of SG pressure and level that are important parameters to diagnose the accident were a little different. We estimated that RELAP5/MOD3 code was not reflected the major control systems in detail, such as FWCS, SBCS and PPCS. The different behaviors of SG level and pressure in this study should be needed an additional review. As a result of the comparison, the major simulation parameters behavior by RELAP5/MOD3 code agreed well with the one by the simulator. Therefore, it is thought that RELAP5/MOD3 code is used as a tool for validation of NPP simulator in the near future through this study

  3. Magnetic susceptibilities of minerals

    Science.gov (United States)

    Rosenblum, Sam; Brownfield, I.K.

    2000-01-01

    Magnetic separation of minerals is a topic that is seldom reported in the literature for two reasons. First, separation data generally are byproducts of other projects; and second, this study requires a large amount of patience and is unusually tedious. Indeed, we suspect that most minerals probably are never investigated for this property. These data are timesaving for mineralogists who concentrate mono-mineralic fractions for chemical analysis, age dating, and for other purposes. The data can certainly be used in the ore-beneficiation industries. In some instances, magnetic-susceptibility data may help in mineral identification, where other information is insufficient. In past studies of magnetic separation of minerals, (Gaudin and Spedden, 1943; Tille and Kirkpatrick, 1956; Rosenblum, 1958; Rubinstein and others, 1958; Flinter, 1959; Hess, 1959; Baker, 1962; Meric and Peyre, 1963; Rojas and others, 1965; and Duchesne, 1966), the emphasis has been on the ferromagnetic and paramagnetic ranges of extraction. For readers interested in the history of magnetic separation of minerals, Krumbein and Pettijohn (1938, p. 344-346) indicated nine references back to 1848. The primary purpose of this paper is to report the magnetic-susceptibility data on as many minerals as possible, similar to tables of hardness, specific gravity, refractive indices, and other basic physical properties of minerals. A secondary purpose is to demonstrate that the total and best extraction ranges are influenced by the chemistry of the minerals. The following notes are offered to help avoid problems in separating a desired mineral concentrate from mixtures of mineral grains.

  4. Radioreceptor assay for GH

    International Nuclear Information System (INIS)

    Tsushima, Toshio; Matsuzaki, Fukashi

    1975-01-01

    Radioreceptor assay (RRA) of growth hormone (GH) was studied using the protein which specifically bound to GH presenting in the liver of rabbits. 100,000g pellet of the liver homogenate was used as receptor source. The factors which affected the results of RRA such as salt, temperature and incubation time, were discussed. As same as in other RRA methods, serum protein inhibited non-specifically 125 I-GH binding in this method. In this assay, serum GH less than 5ng/ml could not be detected. The difference between the value obtained by RRA and that by radioimmunoassay was compared with reference to the patients with acromegalia. (Tsukamoto, Y.)

  5. Lateral flow strip assay

    Science.gov (United States)

    Miles, Robin R [Danville, CA; Benett, William J [Livermore, CA; Coleman, Matthew A [Oakland, CA; Pearson, Francesca S [Livermore, CA; Nasarabadi, Shanavaz L [Livermore, CA

    2011-03-08

    A lateral flow strip assay apparatus comprising a housing; a lateral flow strip in the housing, the lateral flow strip having a receiving portion; a sample collection unit; and a reagent reservoir. Saliva and/or buccal cells are collected from an individual using the sample collection unit. The sample collection unit is immersed in the reagent reservoir. The tip of the lateral flow strip is immersed in the reservoir and the reagent/sample mixture wicks up into the lateral flow strip to perform the assay.

  6. Étude et prise en compte en modélisation de l'effet de la latitude sur ...

    African Journals Online (AJOL)

    SARAH

    30 juil. 2013 ... au Sénégal sous différentes latitudes et l'amélioration de la modélisation de leur réponse à la photopériode. Méthodologie et ... Mots clés : Latitude, Photopériode, Modélisation, Pennisetum glaucum (L.) R. Br.), Modèle SarraH, Sénégal. Journal of Applied ...... cultures céréalières, mise au point d'un SIG.

  7. Modélisation de la vitesse de séchage du maïs | Andriazafimahazo ...

    African Journals Online (AJOL)

    Cet article consiste à présenter un autre modèle appliqué à la détermination de la vitesse de séchage du produit hygroscopique. Ce modèle est obtenu par la ressemblance entre la cinétique chimique et la cinétique de séchage. L'intérêt de ce présent travail c'est de trouver un modèle simple, facile et fiable pour ...

  8. Modélisation et commande d'un panneau photovoltaïque dans l'environnement PSIM

    OpenAIRE

    motahhir, saad; Ghzizal, Abdelaziz El; Derouich, Aziz

    2015-01-01

    International audience; L'objectif de ce travail est de réaliser un modèle de cellules photovoltaïques (PV) dédié à l'enseignement des énergies renouvelables en utilisant le logiciel PSIM. Ce modèle est basé sur les valeurs nominales fournies par le fabricant, à savoir : tension à vide, courant de court-circuit, tension et courant correspondant au point de puissance maximale. Le modèle ainsi obtenu offre la possibilité de mieux rendre compte de l'influence des différentes grandeurs physiques ...

  9. Hyaluronic Acid Assays

    DEFF Research Database (Denmark)

    Itenov, Theis Skovsgaard; Kirkby, Nikolai S; Bestle, Morten H

    2016-01-01

    BACKGROUD: Hyaluronic acid (HA) is proposed as a marker of functional liver capacity. The aim of the present study was to compare a new turbidimetric assay for measuring HA with the current standard method. METHODS: HA was measured by a particle-enhanced turbidimetric immunoassay (PETIA) and enzyme...

  10. Lateral flow assays

    NARCIS (Netherlands)

    Posthuma-Trumpie, G.A.; Amerongen, van A.

    2012-01-01

    A simple version of immunochemical-based methods is the Lateral Flow Assay (LFA). It is a dry chemistry technique (reagents are included); the fluid from the sample runs through a porous membrane (often nitrocellulose) by capillary force. Typically the membrane is cut as a strip of 0.5*5 cm. In most

  11. FLUIDICS DEVICE FOR ASSAY

    DEFF Research Database (Denmark)

    2007-01-01

    The present invention relates to a device for use in performing assays on standard laboratory solid supports whereon chemical entities are attached. The invention furthermore relates to the use of such a device and a kit comprising such a device. The device according to the present invention is a...

  12. Angra-1 operational control systems representation with RELAP5/MOD2 code; Representacao dos sistemas de controle operacional de Angra-1 com o codigo RELAP5/MOD2

    Energy Technology Data Exchange (ETDEWEB)

    Borges, Ronaldo C.; Gebrim, Anibal M. [Comissao Nacional de Energia Nuclear (CNEN), Rio de Janeiro, RJ (Brazil)

    1997-12-01

    The following automatic control systems for Angra-1 NPP were simulated with the RELAP5/MOD2 code: rod control system, steam generator level control system, feedwater bypass valve control system, pressurizer pressure control system and pressurizer level control system. The paper shows the results of two transients: a ten percent step load change and a five percent per minute ramp load change. Satisfactory quantitative and qualitative results were obtained when comparing these results with thermal-hydraulic NPP programmed-values. (author). 7 refs., 13 figs.

  13. Susceptibility to anchoring effects

    Directory of Open Access Journals (Sweden)

    Todd McElroy

    2007-02-01

    Full Text Available Previous research on anchoring has shown this heuristic to be a very robust psychological phenomenon ubiquitous across many domains of human judgment and decision-making. Despite the prevalence of anchoring effects, researchers have only recently begun to investigate the underlying factors responsible for how and in what ways a person is susceptible to them. This paper examines how one such factor, the Big-Five personality trait of openness-to-experience, influences the effect of previously presented anchors on participants' judgments. Our findings indicate that participants high in openness-to-experience were significantly more influenced by anchoring cues relative to participants low in this trait. These findings were consistent across two different types of anchoring tasks providing convergent evidence for our hypothesis.

  14. Topological susceptibility from slabs

    Energy Technology Data Exchange (ETDEWEB)

    Bietenholz, Wolfgang [Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de México, A.P. 70-543, Distrito Federal, C.P. 04510 (Mexico); Forcrand, Philippe de [Institute for Theoretical Physics, ETH Zürich,CH-8093 Zürich (Switzerland); CERN, Physics Department, TH Unit, CH-1211 Geneva 23 (Switzerland); Gerber, Urs [Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de México, A.P. 70-543, Distrito Federal, C.P. 04510 (Mexico); Instituto de Física y Matemáticas, Universidad Michoacana de San Nicolás de Hidalgo,Edificio C-3, Apdo. Postal 2-82, Morelia, Michoacán, C.P. 58040 (Mexico)

    2015-12-14

    In quantum field theories with topological sectors, a non-perturbative quantity of interest is the topological susceptibility χ{sub t}. In principle it seems straightforward to measure χ{sub t} by means of Monte Carlo simulations. However, for local update algorithms and fine lattice spacings, this tends to be difficult, since the Monte Carlo history rarely changes the topological sector. Here we test a method to measure χ{sub t} even if data from only one sector are available. It is based on the topological charges in sub-volumes, which we denote as slabs. Assuming a Gaussian distribution of these charges, this method enables the evaluation of χ{sub t}, as we demonstrate with numerical results for non-linear σ-models.

  15. Topological Susceptibility from Slabs

    CERN Document Server

    Bietenholz, Wolfgang; Gerber, Urs

    2015-01-01

    In quantum field theories with topological sectors, a non-perturbative quantity of interest is the topological susceptibility chi_t. In principle it seems straightforward to measure chi_t by means of Monte Carlo simulations. However, for local update algorithms and fine lattice spacings, this tends to be difficult, since the Monte Carlo history rarely changes the topological sector. Here we test a method to measure chi_t even if data from only one sector are available. It is based on the topological charges in sub-volumes, which we denote as slabs. Assuming a Gaussian distribution of these charges, this method enables the evaluation of chi_t, as we demonstrate with numerical results for non-linear sigma-models.

  16. Determination of Nitrate Reductase Assay Depending on the Microbial Growth

    International Nuclear Information System (INIS)

    El-Kabbany, H.M.

    2012-01-01

    A rapid micro-dilution assay for determination of the antimicrobial susceptibility of different bacterial isolates was developed. This assay is based on the ability of the most of viable organisms to reduce nitrates. The MIC or MBC could be determined by nitrate reductase (NR) only after 30 to 90 min of incubation depending on the behaviour of microbial growth. Bacterial viability is detected by a positive nitrite reduction rather than visible turbidity. The nitrate reduction assay was compared with standard micro-assay using 250 isolates of different taxa against 10 antibiotics belonging to different classes. An excellent agreement of 82.5 % was found between the two methods and only 17.5 % of 1794 trials showed difference in the determined MIC by tow-dilution interval above or below the MIC determined by the turbidimetric method under the same test conditions. However, the nitrate reduction assay was more rapid and sensitive in detecting viable bacteria and so, established an accurate estimate of the minimal inhibitory concentration (MIC) or the minimal bacterial concentration (MBC). The nitrate reduction assay offers the additional advantage that it could be used to determine the MBC without having to subculture the broth. 232 cases of resistance were detected by NR and 4 different media were tested for susceptibility test. The bacterial isolates were exposed to ultra violet (UV) light for different period

  17. Transfert du modèle prédictif d'épidémie de paludisme aux ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    En 2001, cependant, un modèle prédictif a été conçu par l'institut de recherche médicale du Kenya, modèle qui utilise maintenant des facteurs climatiques pour prédire ... Le projet aidera aussi les responsables des politiques et les responsables de la santé publique à effectuer une surveillance préventive et à intervenir de ...

  18. Modèle d'éolienne pour mini-réseau HT/MT

    OpenAIRE

    Gabathuler, Shadya; Roggo, Dominique

    2014-01-01

    Concevoir le modèle de l’entrainement électrique d’une éolienne moderne, représentative du marché actuel. Le modèle d’éolienne doit permettre: L’étude du fonctionnement et de la commande d’une éolienne ; L’étude du comportement en puissance en fonction du vent ; La réinjection de la puissance dans le réseau

  19. Vectorization of LWR transient analysis code RELAP5/MOD1 and its effect

    International Nuclear Information System (INIS)

    Ishiguro, Misako; Harada, Hiroo; Shinozawa, Naohisa; Naraoka, Ken-itsu

    1985-03-01

    The RELAP5/MOD1 is a large thermal-hydraulic code to analyze LWR LOCA and non-LOCA transients. The code originally was designed for use on a CDC Cyber-176. This report documents vectorization of the RELAP5/MOD1 code conducted for the purpose of efficient use of VP-100 (peak speed 250 MFLOPS, clock period 7.5 ns) at the JAERI. The code was vectorized using the junction and volume level parallelisms in the hydrodynamic calculations, and the heat-structure and heat-mesh level in the heat conduction calculations. The vectorized version runs as much as 2.4 to 2.8 times faster than the original scalar version, while the speedup ratio is dependent on the number of spactial cells included in the problem. (author)

  20. Background and system description of the Mod 1 wind turbine generator

    Science.gov (United States)

    Ernst, E. H.

    1978-01-01

    The Mod-1 wind turbine considered is a large utility-class machine, operating in the high wind regime, which has the potential for generation of utility grade power at costs competitive with other alternative energy sources. A Mod-1 wind turbine generator (WTG) description is presented, taking into account the two variable-pitch steel blades of the rotor, the drive train, power generation/control, the Nacelle structure, and the yaw drive. The major surface elements of the WTG are the ground enclosure, the back-up battery system, the step-up transformer, elements of the data system, cabling, area lighting, and tower foundation. The final system weight (rotor, Nacelle, and tower) is expected to be about 650,000 pounds. The WTG will be capable of delivering 1800 kW to the utility grid in a wind-speed above 25 mph.

  1. Intelligence artificielle et agents collectifs : le modèle EUROSIM

    Directory of Open Access Journals (Sweden)

    Denise Pumain

    2007-07-01

    Full Text Available EUROSIM est un modèle multi-agents conçu pour simuler l’évolution à moyen terme du système des villes européennes. Les agents sont des entités collectives, les grandes villes caractérisées par leur taille et leur fonction dans le système des villes, et dont les interactions (échanges modulés par des relations de proximité ou de réseau déterminent la dynamique relative, tandis que la croissance d’ensemble dépend de l’innovation. Des outils d’analyse multiscalaire ont été développés afin d’interpréter les sorties du modèle et faciliter le calibrage.

  2. Assessment of PWR Steam Generator modelling in RELAP5/MOD2. International Agreement Report

    Energy Technology Data Exchange (ETDEWEB)

    Putney, J.M.; Preece, R.J. [National Power, Leatherhead (GB). Technology and Environment Centre

    1993-06-01

    An assessment of Steam Generator (SG) modelling in the PWR thermal-hydraulic code RELAP5/MOD2 is presented. The assessment is based on a review of code assessment calculations performed in the UK and elsewhere, detailed calculations against a series of commissioning tests carried out on the Wolf Creek PWR and analytical investigations of the phenomena involved in normal and abnormal SG operation. A number of modelling deficiencies are identified and their implications for PWR safety analysis are discussed -- including methods for compensating for the deficiencies through changes to the input deck. Consideration is also given as to whether the deficiencies will still be present in the successor code RELAP5/MOD3.

  3. Assessment of PWR Steam Generator modelling in RELAP5/MOD2

    International Nuclear Information System (INIS)

    Putney, J.M.; Preece, R.J.

    1993-06-01

    An assessment of Steam Generator (SG) modelling in the PWR thermal-hydraulic code RELAP5/MOD2 is presented. The assessment is based on a review of code assessment calculations performed in the UK and elsewhere, detailed calculations against a series of commissioning tests carried out on the Wolf Creek PWR and analytical investigations of the phenomena involved in normal and abnormal SG operation. A number of modelling deficiencies are identified and their implications for PWR safety analysis are discussed -- including methods for compensating for the deficiencies through changes to the input deck. Consideration is also given as to whether the deficiencies will still be present in the successor code RELAP5/MOD3

  4. Modeling of BWR core meltdown accidents - for application in the MELRPI. MOD2 computer code

    Energy Technology Data Exchange (ETDEWEB)

    Koh, B R; Kim, S H; Taleyarkhan, R P; Podowski, M Z; Lahey, Jr, R T

    1985-04-01

    This report summarizes improvements and modifications made in the MELRPI computer code. A major difference between this new, updated version of the code, called MELRPI.MOD2, and the one reported previously, concerns the inclusion of a model for the BWR emergency core cooling systems (ECCS). This model and its computer implementation, the ECCRPI subroutine, account for various emergency injection modes, for both intact and rubblized geometries. Other changes to MELRPI deal with an improved model for canister wall oxidation, rubble bed modeling, and numerical integration of system equations. A complete documentation of the entire MELRPI.MOD2 code is also given, including an input guide, list of subroutines, sample input/output and program listing.

  5. Modélisation physique de fondations et d'ouvrages maritimes

    OpenAIRE

    RAULT, G; THOREL, L; GARNIER, J

    2004-01-01

    Après avoir rappelé les principes de la modélisation physique en centrifugeuse, technique aujourd'hui très répandue, plusieurs exemples d'expérimentations réalisées au LCPC, sur des modèles réduits de fondations et d'ouvrages maritimes sont présentés. Ces études sont le plus souvent entreprises pour contribuer au dimensionnement d'ouvrages réels (plates-formes offshore, ponts, quais~). Elles nécessitent la reconstitution de massifs de sol de mêmes caractéristiques mécaniques que celles des fo...

  6. Simulation of small break loss of coolant accident using relap 5/ MOD 2 computer code

    International Nuclear Information System (INIS)

    Megahed, M.M.

    1992-01-01

    An assessment of relap 5 / MOD 2/Cycle 36.05 best estimate computer code capabilities in predicting the thermohydraulic response of a PWR following a small break loss of coolant accident is presented. The experimental data base for the evaluation is the results of Test S-N H-3 performed in the semi scale MOD-2 c Test facility which modeled a 0.5% small break loss of coolant accident with an accompanying failure of the high pressure injection emergency core cooling system. A conclusion was reached that the code is capable of making small break loss of coolant accident calculations efficiently. However, some of the small break loss of coolant accident related phenomena were not properly predicted by the code, suggesting a need for code improvement.9 fig., 3 tab

  7. Modeling of BWR core meltdown accidents - for application in the MELRPI.MOD2 computer code

    International Nuclear Information System (INIS)

    Koh, B.R.; Kim, S.H.; Taleyarkhan, R.P.; Podowski, M.Z.; Lahey, R.T. Jr.

    1985-04-01

    This report summarizes improvements and modifications made in the MELRPI computer code. A major difference between this new, updated version of the code, called MELRPI.MOD2, and the one reported previously, concerns the inclusion of a model for the BWR emergency core cooling systems (ECCS). This model and its computer implementation, the ECCRPI subroutine, account for various emergency injection modes, for both intact and rubblized geometries. Other changes to MELRPI deal with an improved model for canister wall oxidation, rubble bed modeling, and numerical integration of system equations. A complete documentation of the entire MELRPI.MOD2 code is also given, including an input guide, list of subroutines, sample input/output and program listing

  8. Plasma performance and scaling laws in the RFX-mod reversed-field pinch experiment

    International Nuclear Information System (INIS)

    Innocente, P.; Alfier, A.; Canton, A.; Pasqualotto, R.

    2009-01-01

    The large range of plasma currents (I p = 0.2-1.6 MA) and feedback-controlled magnetic boundary conditions of the RFX-mod experiment make it well suited to performing scaling studies. The assessment of such scaling, in particular those on temperature and energy confinement, is crucial both for improving the operating reversed-field pinch (RFP) devices and for validating the RFP configuration as a candidate for the future fusion reactors. For such a purpose scaling laws for magnetic fluctuations, temperature and energy confinement have been evaluated in stationary operation. RFX-mod scaling laws have been compared with those obtained from other RFP devices and numerical simulations. The role of the magnetic boundary has been analysed, comparing discharges performed with different active control schemes of the edge radial magnetic field.

  9. Modélisation du comportement et des couplages HMC des milieux poreux

    OpenAIRE

    Hoang , Ha

    2012-01-01

    Modelling of the behavior and the couplings HMC of the porous circles; La modélisation du comportement hydromécanique chimique des milieux poreux saturés et non saturés est abordée au niveau microscopique et mésoscopique. Au niveau microscopique la modélisation des écoulements diphasiques est basée sur une représentation du réseau poral comme un ensemble de tubes dont les orientations et les rayons sont choisis sur un principe d’équivalence avec les pores. L’algorithme régissant la génération...

  10. Dual isotope assays

    International Nuclear Information System (INIS)

    Smith, G.F.W.; Stevens, R.A.J.; Jacoby, B.

    1980-01-01

    Dual isotope assays for thyroid function are performed by carrying out a radio-immunoassay for two of thyroxine (T4), tri-iodothyronine (T3), thyroid stimulating hormone (TSH), and thyroxine binding globulin (TBG), by a method wherein a version of one of the thyroid components, preferably T4 or T3 is labelled with Selenium-75 and the version of the other thyroid component is labelled with a different radionuclide, preferably Iodine-125. (author)

  11. Cytotoxicity assay automation

    Science.gov (United States)

    Levinthal, E. C.; Payne, R. O.

    1971-01-01

    The design and construction of a system to automatically test HLP antigens are described. Major efforts were made to test and evaluate the performance of such a system, and compare its performance with nonautomatic tissue typing techniques. The system is based on the fluorochromatic cytotoxicity assay. Results show the system will work but is subject to malfunctions after a few samplings, and poses problems in showing correctly the necessary readings.

  12. Relap4/SAS/Mod5 - A version of Relap4/Mod 5 adapted to IPEN/CNEN - SP computer center

    International Nuclear Information System (INIS)

    Sabundjian, G.

    1988-04-01

    In order to improve the safety of nuclear reactor power plants several computer codes have been developed in the area of thermal - hydraulics accident analysis. Among the public-available codes, RELAP4, developed by Aerojet Nuclear Company, has been the most popular one. RELAP4 has produced satisfactory results when compared to most of the available experimental data. The purposes of the present work are: optimization of RELAP4 output and messages by writing there information in temporary records, - display of RELAP4 results in graphical form through the printer. The sample problem consists on a simplified model of a 150 MW (e) PWR whose primary circuit is simulated by 6 volumes, 8 junctions and 1 heat slab. This new version of RELAP4 (named RELAP4/SAS/MOD5) have produced results which show that the above mentioned purposes have been reached. Obviously the graphical output by RELAP4/SAS/MOD5 favors the interpretation of results by the user. (author) [pt

  13. A study of the dispersed flow interfacial heat transfer model of RELAP5/MOD2.5 and RELAP5/MOD3

    Energy Technology Data Exchange (ETDEWEB)

    Andreani, M. [Swiss Federal Institute of Technology, Zurich (Switzerland); Analytis, G.T.; Aksan, S.N. [Paul Scherrer Institute, Villigen (Switzerland)

    1995-09-01

    The model of interfacial heat transfer for the dispersed flow regime used in the RELAP5 computer codes is investigated in the present paper. Short-transient calculations of two low flooding rate tube reflooding experiments have been performed, where the hydraulic conditions and the heat input to the vapour in the post-dryout region were controlled for the predetermined position of the quench front. Both RELAP5/MOD2.5 and RELAP5/MOD3 substantially underpredicted the exit vapour temperature. The mass flow rate and quality, however, were correct and the heat input to the vapour was larger than the actual one. As the vapour superheat at the tube exit depends on the balance between the heat input from the wall and the heat exchange with the droplets, the discrepancy between the calculated and the measured exit vapour temperature suggested that the inability of both codes to predict the vapour superheat in the dispersed flow region is due to the overprediction of the interfacial heat transfer rate.

  14. Conception d’un automate cellulaire non stationnaire à base de graphe pour modéliser la structure spatiale urbaine: le modèle Remus

    Directory of Open Access Journals (Sweden)

    Arnaud Banos

    2007-10-01

    Full Text Available Nous proposons dans cet article une formalisation originale des automates cellulaires géographiques, à même de mieux prendre en compte grâce à une structure de graphe le voisinage irrégulier et dynamique d’entités spatiales. Le modèle Remus permet ainsi de représenter sous la forme d’un graphe mathématique les entités spatiales du bâti et les réseaux de transport urbain (graphe urbain ; il permet aussi de calculer la distance-temps entre bâtiments par le réseau. Le modèle Remus permet l’extraction de différents graphes, dont le graphe fonctionnel des distances-temps entre les immeubles et le graphe de relations de voisinage qui représente le voisinage par le réseau pour un certain seuil de temps de trajet et pour un mode de transport donné.

  15. Modélisation et simulation par la méthode des volumes finis des ...

    African Journals Online (AJOL)

    écoulement. Ces équations sont moyennées sur la profondeur d'eau. La résolution des équations de Barré de Saint-Venant à deux dimensions est alors faite en utilisant la méthode des volumes finis. Le modèle en régime non permanent est utilisé ...

  16. Transient simulation of ALWR passive safety systems using RELAP5/MOD2

    International Nuclear Information System (INIS)

    Elias, E.; Nekhamkin, Y.; Arshavski, I.

    2004-01-01

    Numerical simulation is presented of some passive safety systems currently incorporated in the design of the next generation advanced light water reactors (ALWRs). The performance and effectiveness of ex-core natural convection cooling and the concept of gravity driven water injection at high pressure are investigated using the RELAP5/MOD2 thermal-hydraulic code. The study identifies areas that should be investigated more fully in future experimental programs related to hypothetical large and small LOCA in ALWRs. (author)

  17. Se servir de la modélisation pour lutter contre les maladies ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    En se fondant sur des données émanant des activités de recherche et de surveillance du National Center for AIDS/STD Control and Prevention de la Chine, l'équipe de recherche s'emploie à concevoir des modèles propres à certaines maladies, en commençant par l'infection au VIH. Après avoir déterminé les différents ...

  18. A containment convective loop analysis using the RELAP5-Mod 3.2

    International Nuclear Information System (INIS)

    Ventura, M.

    1996-01-01

    The present study was performed to verify the RELAP5-Mod 3.2 code capability to calculate convection phenomena of the type occurring in a convective loop. A simplified geometrical model of a reactor containment system was used. The parametric studies were made for the main variables which govern material transport in the volume junctions considered. The results obtained and that got using the same model with the CONTAIN code, were compared. The comparison is satisfactory. (author). 3 refs., 11 figs

  19. Tableaux et modèles: «vive la sintayse»

    Directory of Open Access Journals (Sweden)

    Christian GERMANAZ

    1994-09-01

    Full Text Available L’image géographique et la peinture présentent beaucoup de similitudes. Il est possible d’analyser l’image picturale sous l’angle de la modélisation. Par l’intermédiaire de la chorématique une équivalence dans le langage plastique et pictural a été trouvée Le Christ jaune de Gauguin permet de tester cette transposition.

  20. 118 Modélisation des réactions de pyrolyse des coques de coco ...

    African Journals Online (AJOL)

    Afrique Sciences

    différentes étapes de la gazéification à savoir le séchage, la pyrolyse, la combustion et les principales réactions de réduction. La présente méthode proposée repose ... sur les produits de dégradation thermique de ces biomasses notamment le pourcentage massique du gaz et de charbontoute chose qui alourdi le modèle.

  1. Primes of the form x2 + dy2 with x ≡ 0(mod N)

    Indian Academy of Sciences (India)

    which states that, for p > 2, p = x2 + y2 ⇔ p ≡ 1(mod 4). This led many mathematicians to work on primes of the form x2 + dy2 for d = 2, 3, 5, 7 and so on. Cox [6] solved this problem using the techniques from class field theory. Cox's result is as follows: let n be a positive integer, p an odd prime relatively prime to d and.

  2. Calculation of behaviour of the Juragua NPP containment with code TRACOV/MOD1

    International Nuclear Information System (INIS)

    Castillo Alvarez, J.; Valle Cepero, R.; Luis, J.; San Roman, J.C.; Pomier, L.

    1996-01-01

    The containment of Juragua NPP has some unique features, which differ from the rest of the PWR reactors design. Those features impose additional requirements for its numerical simulation. In this paper is analyzed the behaviour of the Juragua NPP containment during accident situation with double ended break of the primary pipelines with flow in both direction using the code TRACOV/MOD1. The results are compared with obtained by the designer. The main restrictions of the code are identified

  3. Modèles commerciaux libres (Amérique latine) - phase II | CRDI ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Les modèles commerciaux libres proposent une façon différente d'échanger, dans le domaine de l'information, des connaissances et de la culture, ... Le Centro de Tecnologia e Sociedade (CTS - centre pour la technologie et la société) fait partie de la Faculté de droit de la Fundação Getulio Vargas à Rio de Janeiro.

  4. Calculations of Changes in Reactivity during some regular periods of operation of JEN-1 MOD Reactor

    International Nuclear Information System (INIS)

    Alcala Ruiz, F.

    1973-01-01

    By a Point-Reactor model and Perturbation Theory, changes in reactivity during some regular operating periods of JEN-1 MOD Reactor have been calculated and compared with available measured values. they were in good agreement. Also changes in reactivity have been calculated during operations at higher power levels than the present one, concluding some practical consequences for the case of increasing the present power of this reactor. (Author)

  5. Développement d'un nouveau modèle pour la simulation en continu ...

    African Journals Online (AJOL)

    Hamouda

    conformément à l'organigramme général de la figure 6. Enfin, pour des besoins de convergence du schéma explicite de résolution et d'adéquation avec les modèles d'hydrologie urbaine. (assainissement pluvial), le pas de temps pris, est le plus fin possible. En hydrologie urbaine, le pas de temps des simulations est de ...

  6. Vertical downward subcooled bubbly flow modelling with RELAP5/MOD3.2.2 gamma

    International Nuclear Information System (INIS)

    Ristevski, R.; Parzer, I.; Markov, Z.

    2000-01-01

    The presented paper will consider the correlation for void fraction distribution in the subcooled boiling flow regime of downward liquid flow at low velocities. More specifically, it will focus on the choice of the most appropriate heat and mass transfer correlation. The experimental findings and theoretical consideration of these processes and phenomena will be compared with RELAP5/MOD3.2.2 Gamma predictions. (author)

  7. Combining MOD10A1 and MYD10A1 Images For Snow Cover Area Monitoring

    Science.gov (United States)

    Tekeli, A. E.

    2008-12-01

    MOD10A1 and MYD10A1 daily snow cover maps at 500 m resolution are available from MODIS sensors on Terra and Aqua satellites. Aqua obtains the image of same region approximately three hours after Terra over Turkey region. MODIS is an optic sensor and cloud cover degrades the usability of derived snow cover maps. Moreover, spectral similarity between clouds and snow complicates their separability in visible imagery. Fortunately, dynamic behavior of clouds enables their discrimination from snow stationary on the surface. Combined use of MOD10A1 and MYD10A1 images mostly reduces the cloud cover present in one image alone and provides better representation of surface snow cover. Comparison of merged images with in situ data indicated higher hit ratios. The individual comparison of MOD10A1 and MYD10A1 images with ground data each yielded 31% hit ratio whereas, the merged images provided 38%. One-day shifts in comparisons increased hit ratios to 52 % and 46% whereas and two-day shifts gave 77 % and 79 % for MOD10A1 and MYD10A1 respectively. Merged maps yielded 54% and 83% for one and two day shifts. The improvement provided by the merging technique is found to be 7% for the present day, 7 % for one- day and 5% for two-day shifts for the whole season. Monthly decomposition resulted 25% improvement as the maximum. The snow cover product obtained by merging Terra and Aqua satellites provided higher hit ratios, as expected.

  8. Assessment of Human Bio-Behavior During Gait Process Using LifeMOD Software

    Directory of Open Access Journals (Sweden)

    Liliana Rogozea

    2011-01-01

    Full Text Available In this paper we present a set of observations concerning the
    analysis and assessment of human bio-behavior during gait process. In the first part of the paper the fundamental and theoretical considerations of the gait process are approached and aspects connected to malfunctions are expressed. In the second part of the paper we present the modeling methodology using
    the LifeMOD software, while in the third part the results and conclusions are presented.

  9. MOD-AGE - an algorithm for age-depth model construction; U-series dated speleothems case study

    Science.gov (United States)

    Hercman, H.; Pawlak, J.

    2012-04-01

    We present MOD-AGE - a new system for chronology construction. MOD-AGE can be used for profiles that have been dated by different methods. As input data, the system uses the following basic measurements: activities, atomic ratios or age, as well as depth measurement. Based on probability distributions describing the measurement results, MOD-AGE estimates the age~depth relation and its confidence bands. To avoid the use of difficult-to-meet assumptions, MOD-AGE uses nonparametric methods. We applied a Monte Carlo simulation to model age and depth values based on the real distribution of counted data (activities, atomic ratios, depths etc.). Several fitting methods could be applied for estimating the relationships; based on several tests, we decide to use LOESS method (locally weighted scatterplot smoothing). The stratigraphic correction procedure applied in the MOD-AGE program uses a probability calculus, which assumes that the ages of all the samples are correctly estimated. Information about the probability distribution of the samples' ages is used to estimate the most probable sequence that is concordant according to the superposition rule. MOD-AGE is presented as a tool for the chronology construction of speleothems that have been analyzed by the U-series method, and it is compared to the StalAge algorithm presented by D. Scholtz and D.L Hoffmann (2011). Scholtz, D., Hoffmann, D. L., 2011. StalAge - An algorithm designed for construction of speleothem age models. Quaternary Geochronology 6, 369-382.

  10. A new formulation of the law of octic reciprocity for primes ≡±3(mod8 and its consequences

    Directory of Open Access Journals (Sweden)

    Richard H. Hudson

    1982-01-01

    Full Text Available Let p and q be odd primes with q≡±3(mod8, p≡1(mod8=a2+b2=c2+d2 and with the signs of a and c chosen so that a≡c≡1(mod4. In this paper we show step-by-step how to easily obtain for large q necessary and sufficient criteria to have (−1(q−1/2q(p−1/8≡(a−bd/acj(modp for j=1,…,8 (the cases with j odd have been treated only recently [3] in connection with the sign ambiguity in Jacobsthal sums of order 4. This is accomplished by breaking the formula of A.E. Western into three distinct parts involving two polynomials and a Legendre symbol; the latter condition restricts the validity of the method presented in section 2 to primes q≡3(mod8 and significant modification is needed to obtain similar results for q≡±1(mod8. Only recently the author has completely resolved the case q≡5(mod8, j=1,…,8 and a sketch of the method appears in the closing section of this paper.

  11. Assessment of TRAC-PF1/MOD1 code for large break LOCA in PWR

    International Nuclear Information System (INIS)

    Akimoto, Hajime; Ohnuki, Akira; Murao, Yoshio; Abe, Yutaka.

    1993-03-01

    As the first step of the REFLA/TRAC code development, the TRAC/PF1/MOD1 code has been assessed for various experiments that simulate postulated large-break loss-of-coolant accident (LBLOCA) in PWR to understand the predictive capability and to identify the problem areas of the code. The assessment calculations were performed for separate effect tests for critical flow, counter current flow, condensation at cold leg and reflood as well as integral tests to understand predictability for individual phenomena. This report summarizes results from the assessment calculations of the TRAC-PF1/MOD1 code for LBLOCA in PWR. The assessment calculations made clear the predictive capability and problem areas of the TRAC-PF1/MOD1 code for LBLOCA in PWR. The areas, listed below, should be improved for more realistic and effective simulation of LBLOCA in PWR: (1) core heat transfer model during blowdown, (2) ECC bypass model at downcomer during refill, (3) condensation model during accumulator injection, and (4) core thermal hydraulic model during reflood. (author) 57 refs

  12. Experiment data report for semiscale Mod-1 test S-06-6 (LOFT counterpart test). [PWR

    Energy Technology Data Exchange (ETDEWEB)

    Esparza, V.; Sackett, K. E.

    1977-09-01

    Recorded test data are presented for Test S-06-6 of the Semiscale Mod-1 LOFT counterpart test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying a hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-06-6 was conducted from initial conditions of 15 792 kPa and 563 K to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the broken loop cold leg piping. During the test, cooling water was injected into the cold leg of the intact loop to simulate emergency core coolant injection in a PWR. The heater rods in the electrically heated core were operated at an axial peak power density which was 75% of the maximum peak power density (52.5 kW/m). Test S-06-6 also evaluated the effect of special hardware assumptions on the core response.

  13. Experiment data report for semiscale Mod-1 Test S-06-5. (LOFT counterpart test). [PWR

    Energy Technology Data Exchange (ETDEWEB)

    None

    1977-06-01

    Recorded test data are presented for Test S-06-5 of the Semiscale Mod-1 LOFT counterpart test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying a hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-06-5 was conducted from initial conditions of 2272 psia and 536/sup 0/F to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the broken loop cold leg piping. During the test, cooling water was injected into the cold legs of the intact and broken loops to simulate emergency core coolant injection in a PWR. The purpose of Test S-06-5 was to assess the influence of the break nozzle geometry on core thermal and system response and on the subcooled and low quality mass flow rates at the break locations.

  14. Analysis of a SBO in a CANDU using RELAP/SCDAPSIM/MOD3.6

    Energy Technology Data Exchange (ETDEWEB)

    Dinca, E., E-mail: elena.dinca@cncan.ro [CNCAN National Commission for Nuclear Activities Control (Romania); Dupleac, D.; Nistor-Vlad, R-M., E-mail: ddupleac@yahoo.com, E-mail: roxanamihaelanistorvlad@gmail.com [Politehnica Univ. of Bucharest (Romania); Bonelli, A., E-mail: abonelli@nasa.com.ar [UG-CNAII-IVCN Nucleoelectrica Argentina S.A., Licensing, Nuclear Safety and Core Design, Buenos Aires (Argentina); Siefken, L. J.; Allison, C.M.; Hohorst, J.K., E-mail: lmsiefken@gmail.com, E-mail: iss@srv.net, E-mail: jkh@srv.net [Innovative Systems Software, Idaho Falls, ID (United States)

    2015-07-01

    A new experimental version, RELAP/SCDAPSIM/MOD3.6, is being developed to support the analysis of Pressurized Heavy Water Reactors (PHWRs) under severe accident conditions. It is a derivative of RELAP/SCDAPSIM/MOD3.5, which has the most advanced fuel and severe accident modeling options for LWRs. This paper summarizes the verification and development of input models and minor changes to the code for a RELAP/SCDAPSIM/MOD3.6 analysis and the recommendations for code improvements to develop a robust code for severe accident analysis of a CANDU reactor. The CANDU-specific modeling improvements which include (a) the development of a single channel fuel bundle model, (b) improvements to the SCDAP fuel rod and shroud component models for horizontal fuel bundles, calandria tubes, and pressure tubes, and (c) improvements to the COUPLE porous media module to predict the latter stages of the accident. This paper will also discuss the verification testing of the models by comparing predicted results to LWR experiments and CANDU specific codes, and the analysis of a station blackout in a CANDU NPP. (author)

  15. Comparison of tungsten nano-tendrils grown in Alcator C-Mod and linear plasma devices

    International Nuclear Information System (INIS)

    Wright, G.M.; Brunner, D.; Baldwin, M.J.; Bystrov, K.; Doerner, R.P.; Labombard, B.; Lipschultz, B.; De Temmerman, G.; Terry, J.L.; Whyte, D.G.; Woller, K.B.

    2013-01-01

    Growth of tungsten nano-tendrils (“fuzz”) has been observed for the first time in the divertor region of a high-power density tokamak experiment. After 14 consecutive helium L-mode discharges in Alcator C-Mod, the tip of a tungsten Langmuir probe at the outer strike point was fully covered with a layer of nano-tendrils. The depth of the W fuzz layer (600 ± 150 nm) is consistent with an empirical growth formula from the PISCES experiment. Re-creating the C-Mod exposures as closely as possible in Pilot-PSI experiment can produce nearly-identical nano-tendril morphology and layer thickness at surface temperatures that agree with uncertainties with the C-Mod W probe temperature data. Helium concentrations in W fuzz layers are measured at 1–4 at.%, which is lower than expected for the observed sub-surface voids to be filled with several GPa of helium pressure. This possibly indicates that the void formation is not pressure driven

  16. Web based electronic logbook and experiment run database viewer for Alcator C-Mod

    International Nuclear Information System (INIS)

    Fredian, T.W.; Stillerman, J.A.

    2006-01-01

    Since 1991, the scientists and engineers at the Alcator C-Mod experiment at MIT have been recording text entries about the experiments being performed in an electronic logbook. In addition, separate documents such as run plans, run summaries and experimental proposals have been created and stored in a variety of formats in computer files. This information has now been organized and made available via any modern web browser. The new web based interface permits the user to browse through all the logbook entries, run information and even view some key data traces of the experiment. Since this information is being catalogued by Internet search engines, these tools can also be used to quickly locate information. The web based logbook and run information interface provides some additional capabilities. Once logged into the web site, users can add, delete or modify logbook entries directly from their browser. The logbook window on their browser also provides dynamic updating when any new logbook entries are made. There is also live C-Mod operation status information with optional audio announcements available. The user can receive the same state change announcements such as 'entering init' or 'entering pulse' as they would if they were sitting in the C-Mod control room. This paper will describe the functionality of the web based logbook and how it was implemented

  17. Radon transport modelling: User's guide to RnMod3d

    Energy Technology Data Exchange (ETDEWEB)

    Andersen, C.E

    2000-08-01

    RnMod3d is a numerical computer model of soil-gas and radon transport in porous media. It can be used, for example, to study radon entry from soil into houses in response to indoor-outdoor pressure differences or changes in atmospheric pressure. It can also be used for flux calculations of radon from the soil surface or to model radon exhalation from building materials such as concrete. The finite-volume model is a technical research tool, and it cannot be used meaningfully without good understanding of the involved physical equations. Some understanding of numerical mathematics and the programming language Pascal is also required. Originally, the code was developed for internal use at Risoe only. With this guide, however, it should be possible for others to use the model. Three-dimensional steady-state or transient problems with Darcy flow of soil gas and combined generation, radioactive decay, diffusion and advection of radon can be solved. Moisture is included in the model, and partitioning of radon between air, water and soil grains (adsorption) is taken into account. Most parameters can change in time and space, and transport parameters (diffusivity and permeability) may be anisotropic. This guide includes benchmark tests based on simple problems with known solutions. RnMod3d has also been part of an international model intercomparison exercise based on more complicated problems without known solutions. All tests show that RnMod3d gives results of good quality. (au)

  18. Second Generation HTs Wire Based on RABiTS Substrates and MOD YBCO

    Energy Technology Data Exchange (ETDEWEB)

    Schoop, U. [American Superconductor Corporation, Westborough, MA; Rupich, Marty [American Superconductor Corporation, Westborough, MA; Thieme, C. L. H. [American Superconductor Corporation, Westborough, MA; Verebelyi, D. T. [American Superconductor Corporation, Westborough, MA; Zhang, W. [American Superconductor Corporation, Westborough, MA; Li, Xiaoping [American Superconductor Corporation, Westborough, MA; Kodenkandath, Thomas [American Superconductor Corporation, Westborough, MA; Nguyen, N. [American Superconductor Corporation, Westborough, MA; Siegal, E. E. [American Superconductor Corporation, Westborough, MA; Civale, L. [Los Alamos National Laboratory (LANL); Holesinger, T. G. [Los Alamos National Laboratory (LANL); Maiorov, B. [Los Alamos National Laboratory (LANL); Goyal, Amit [ORNL; Paranthaman, Mariappan Parans [ORNL

    2005-01-01

    The performance of Second Generation (2G) high temperature superconducting wire manufactured by continuous reel-to-reel processes is nearing the 300 A/cm-width (77 K, self field) performance threshold for commercial power cable applications. The 2G manufacturing approach under development at American Superconductor is based on the combination of the RABiTS substrate-buffer technology with metal organic deposition (MOD) of the YBCO layer. The capability of this process has been demonstrated in multiple 10 meter lengths with critical currents exceeding 250 A/cm-width with high uniformity and reproducibility. Critical currents of 380 A/cm-width have been achieved in short length samples prepared by the same basic process. The incorporation of nanoparticles ('nanodots') into the YBCO layer using the MOD process has resulted in a 2-fold improvement in the critical current at 65 K in a 3 T field. The research and development focus at ASMC is now directed toward the economical scale-up of the RABiTS/MOD process, optimization of the conductor properties for targeted applications and the use of 2G wire in initial demonstration applications.

  19. Radon transport modelling: User's guide to RnMod3d

    International Nuclear Information System (INIS)

    Andersen, C.E.

    2000-08-01

    RnMod3d is a numerical computer model of soil-gas and radon transport in porous media. It can be used, for example, to study radon entry from soil into houses in response to indoor-outdoor pressure differences or changes in atmospheric pressure. It can also be used for flux calculations of radon from the soil surface or to model radon exhalation from building materials such as concrete. The finite-volume model is a technical research tool, and it cannot be used meaningfully without good understanding of the involved physical equations. Some understanding of numerical mathematics and the programming language Pascal is also required. Originally, the code was developed for internal use at Risoe only. With this guide, however, it should be possible for others to use the model. Three-dimensional steady-state or transient problems with Darcy flow of soil gas and combined generation, radioactive decay, diffusion and advection of radon can be solved. Moisture is included in the model, and partitioning of radon between air, water and soil grains (adsorption) is taken into account. Most parameters can change in time and space, and transport parameters (diffusivity and permeability) may be anisotropic. This guide includes benchmark tests based on simple problems with known solutions. RnMod3d has also been part of an international model intercomparison exercise based on more complicated problems without known solutions. All tests show that RnMod3d gives results of good quality. (au)

  20. Les industries culturelles en mutation : des modèles en question

    Directory of Open Access Journals (Sweden)

    Lucien Perticoz

    2012-09-01

    Full Text Available La présente contribution se propose de questionner la notion de modèles socio-économiques dans le cadre des travaux relatifs aux mutations des industries culturelles. À cette fin, l’exposé se déroulera en trois temps : nous reviendrons tout d’abord sur les caractéristiques essentielles des modèles génériques (modèle éditorial et de flot ainsi que sur leurs principaux apports ; nous expliquerons ensuite dans quelle mesure ils doivent être considérés, non comme une description fidèle de la réalité dont ils entendent rendre compte, mais davantage comme des règles du jeu permettant d’appréhender les mutations à l’œuvre ; enfin, à l’aune de la numérisation des contenus et de leur consommation via Internet, nous interrogerons l’hypothèse de l’émergence de nouveaux modèles génériques. En conclusion, nous insisterons sur la nécessité, à notre sens, de prendre en compte l’évolution des pratiques culturelles médiatiques en tant que dimension structurante de ces modèles.This paper aims to question the concept of socio-economic models within the framework of research about cultural industries mutations. For this purpose, our presentation will proceed in three parts : first of all, we will reconsider the essential characteristics of the generic models (publishing model and flow model and their main contributions to the research ; we will explain then why they must be considered, not as a faithful description of the reality of which they intend to give an account, but more like rules of the game allowing to understand the mutations of cultural industries ; finally, considering the digitalization of contents and their consumption using Internet, we will question the hypothesis of the emergence of new generic models. In conclusion, we will insist on the importance, from our opinion, to take into account the evolution of the media cultural practices as a structuring dimension of these models.

  1. From the Last Interglacial to the Anthropocene: Modelling a Complete Glacial Cycle (PalMod)

    Science.gov (United States)

    Brücher, Tim; Latif, Mojib

    2017-04-01

    We will give a short overview and update on the current status of the national climate modelling initiative PalMod (Paleo Modelling, www.palmod.de). PalMod focuses on the understanding of the climate system dynamics and its variability during the last glacial cycle. The initiative is funded by the German Federal Ministry of Education and Research (BMBF) and its specific topics are: (i) to identify and quantify the relative contributions of the fundamental processes which determined the Earth's climate trajectory and variability during the last glacial cycle, (ii) to simulate with comprehensive Earth System Models (ESMs) the climate from the peak of the last interglacial - the Eemian warm period - up to the present, including the changes in the spectrum of variability, and (iii) to assess possible future climate trajectories beyond this century during the next millennia with sophisticated ESMs tested in such a way. The research is intended to be conducted over a period of 10 years, but with shorter funding cycles. PalMod kicked off in February 2016. The first phase focuses on the last deglaciation (app. the last 23.000 years). From the ESM perspective PalMod pushes forward model development by coupling ESM with dynamical ice sheet models. Computer scientists work on speeding up climate models using different concepts (like parallelisation in time) and one working group is dedicated to perform a comprehensive data synthesis to validate model performance. The envisioned approach is innovative in three respects. First, the consortium aims at simulating a full glacial cycle in transient mode and with comprehensive ESMs which allow full interactions between the physical and biogeochemical components of the Earth system, including ice sheets. Second, we shall address climate variability during the last glacial cycle on a large range of time scales, from interannual to multi-millennial, and attempt to quantify the relative contributions of external forcing and processes

  2. Radon assay for SNO+

    Energy Technology Data Exchange (ETDEWEB)

    Rumleskie, Janet [Laurentian University, Greater Sudbury, Ontario (Canada)

    2015-12-31

    The SNO+ experiment will study neutrinos while located 6,800 feet below the surface of the earth at SNOLAB. Though shielded from surface backgrounds, emanation of radon radioisotopes from the surrounding rock leads to back-grounds. The characteristic decay of radon and its daughters allows for an alpha detection technique to count the amount of Rn-222 atoms collected. Traps can collect Rn-222 from various positions and materials, including an assay skid that will collect Rn-222 from the organic liquid scintillator used to detect interactions within SNO+.

  3. Radiorespirometic assay device

    International Nuclear Information System (INIS)

    Levin, G.V.; Straat, P.A.

    1981-01-01

    A radiorespirometic assay device is described in which the presence of microorganisms in a sample is determined by placing the sample in contact with a metabolisable radioactive labelled substrate, collecting any gas evolved, exposing a photosensitive material to the gas and determining if a spot is produced on the material. A spot indicates the presence of radioactivity showing that the substrate has been metabolized by a microorganism. Bacteria may be detected in body fluids, hospital operating rooms, water, food, cosmetics and drugs. (U.K.)

  4. [Antimicrobial susceptibility in Chile 2012].

    Science.gov (United States)

    Cifuentes-D, Marcela; Silva, Francisco; García, Patricia; Bello, Helia; Briceño, Isabel; Calvo-A, Mario; Labarca, Jaime

    2014-04-01

    Bacteria antimicrobial resistance is an uncontrolled public health problem that progressively increases its magnitude and complexity. The Grupo Colaborativo de Resistencia, formed by a join of experts that represent 39 Chilean health institutions has been concerned with bacteria antimicrobial susceptibility in our country since 2008. In this document we present in vitro bacterial susceptibility accumulated during year 2012 belonging to 28 national health institutions that represent about 36% of hospital discharges in Chile. We consider of major importance to report periodically bacteria susceptibility so to keep the medical community updated to achieve target the empirical antimicrobial therapies and the control measures and prevention of the dissemination of multiresistant strains.

  5. Disagreement between Human Papillomavirus Assays

    DEFF Research Database (Denmark)

    Rebolj, Matejka; Preisler, Sarah; Ejegod, Ditte Møller

    2014-01-01

    -65 years (n = 2,881), 23% tested positive on at least one assay, and 42 to 58% of these showed positive agreement on any compared pair of the assays. While 4% of primary screening samples showed abnormal cytology, 6 to 10% were discordant on any pair of assays. A literature review corroborated our findings...

  6. Hypnotic susceptibility and dream characteristics.

    Science.gov (United States)

    Zamore, N; Barrett, D

    1989-11-01

    This study examined the relationship of hypnotic susceptibility to a variety of dream characteristics and types of dream content. A Dream Questionnaire was constructed synthesizing Gibson's dream inventory and Hilgard's theoretical conceptions of hypnosis. Employing the Harvard Group Scale of Hypnotic Susceptibility and the Field Inventory for evaluating hypnotic response, several dream dimensions correlated significantly with hypnotizability. For subjects as a whole, the strongest correlates were the frequency of dreams which they believed to be precognitive and out-of-body dreams. Ability to dream on a chosen topic also correlated significantly with hypnotic susceptibility for both genders. For females only, there was a negative correlation of hypnotic susceptibility to flying dreams. Absorption correlated positively with dream recall, ability to dream on a chosen topic, reports of conflict resolution in dreams, creative ideas occurring in dreams, amount of color in dreams, pleasantness of dreams, bizarreness of dreams, flying dreams and precognitive dreams.

  7. An acoustic prion assay

    Directory of Open Access Journals (Sweden)

    Gordon Hayward

    2016-12-01

    Full Text Available An acoustic prion assay has been demonstrated for sheep brain samples. Only five false positives and no false negatives were observed in a test of 45 positive and 45 negative samples. The acoustic prion sensor was constructed using a thickness shear mode quartz resonator coated with a covalently bound recombinant prion protein. The characteristic indicator of a scrapie infected sheep brain sample was an observed shoulder in the frequency decrease in response to a sample.The response of the sensor aligns with a conformational shift in the surface protein and with the propagation mechanism of the disease. This alignment is evident in the response timing and shape, dependence on concentration, cross species behaviour and impact of blood plasma. This alignment is far from sufficient to prove the mechanism of the sensor but it does offer the possibility of a rapid and inexpensive additional tool to explore prion disease. Keywords: Prions, Thickness shear mode quartz sensor

  8. Assay of oestrogen

    International Nuclear Information System (INIS)

    Edwards, J.C.

    1981-01-01

    A particular problem with the direct radioimmunoassay of unconjugated oestriol in pregnancy is caused by the increased amount of steroid-binding proteins present in pregnancy serum and plasma. The steroid-binding proteins react with oestriol and 125 I-labelled oestriol during the assay procedure and the steroid-protein bound 125 I-labelled oestriol is precipitated along with the antibody-bound 125 I-labelled oestriol by the ammonium sulphate solution separation system. A novel method is described whereby progesterone (1-20 μg/ml) is used to block the action of steroid-binding proteins in pregnancy serum and plasma samples, thus minimizing interference in a direct radioimmunoassay for unconjugated oestriol using a specific anti-oestriol serum. (U.K.)

  9. Ancestral susceptibility to colorectal cancer

    Czech Academy of Sciences Publication Activity Database

    Huhn, S.; Pardini, Barbara; Naccarati, Alessio; Vodička, Pavel (ed.); Hemminki, K.; Försti, A.

    2012-01-01

    Roč. 27, č. 2 (2012), s. 197-204 ISSN 0267-8357 R&D Projects: GA ČR GA310/07/1430; GA ČR GAP304/10/1286 Grant - others:EU FP7(XE) HEALTH-F4-2007-200767 Institutional research plan: CEZ:AV0Z50390512 Keywords : cancer susceptibility * molecular epidemiology * genetic susceptibility Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 3.500, year: 2012

  10. Coagulation assays and anticoagulant monitoring.

    Science.gov (United States)

    Funk, Dorothy M Adcock

    2012-01-01

    Anticoagulant therapy, including conventional agents and a variety of new oral, fast-acting drugs, is prescribed for millions of patients annually. Each anticoagulant varies in its effect on routine and specialty coagulation assays and each drug may require distinct laboratory assay(s) to measure drug concentration or activity. This review provides an overview of the assorted assays that can measure anticoagulant drug concentration or activity and includes key assay interferences. The effect of these conventional and new anticoagulant agents on specialty coagulation assays used to evaluate for bleeding or clotting disorders, and whether this impact is physiological or factitious, is included. Also provided is a short review of superwarfarin poisoning and features distinguishing this from warfarin overdose. Knowledge of clinically significant pearls and pitfalls pertinent to coagulation assays in relation to anticoagulant therapy are important to optimize patient care.

  11. Susceptibility of pathogenic and nonpathogenic Naegleria spp. to complement-mediated lysis.

    OpenAIRE

    Whiteman, L Y; Marciano-Cabral, F

    1987-01-01

    The susceptibility of four species of Naegleria amoebae to complement-mediated lysis was determined. The amoebicidal activity of normal human serum (NHS) and normal guinea pig serum (NGPS) for Naegleria amoebae was measured by an in vitro cytotoxicity assay. Release of radioactivity from amoebae labeled with [3H]uridine and visual observation with a compound microscope were used as indices of lysis. Highly pathogenic mouse-passaged N. fowleri was less susceptible to the lytic effects of NHS a...

  12. Réduction par amalgame modal d'un modèle thermique

    Science.gov (United States)

    Oulefki, A.; Neveu, A.

    1993-02-01

    A complete method for reducing state models of linear thermal systems without mass transfer is presented here. The idea set to work is based on partitioning of the model state space into some orthogonal subspaces. We prove how minimization of an output error corresponding to non uniform, time varying temperature, can independently be performed in each subspace. The use of the Lyapunov integral allows to obtain from each subspace one pseudo-eigen function which is sufficiently representative of the dynamic of the system. A significant measure of reduction error is introduced in order to quantify the validity of reduced models. The optimality of the reduced model obtained with the presented method is demonstrated with respect to the error measure. This article contains an application of the obtained results to the one-dimensional composite wall model. But the reduction method can apply to multidimensional models as well. An algorithm for automatic reduction is given. Generalizing the method for reducing models of thermal systems including mass transfer can be envisioned. Nous esquissons dans cet article une méthode complète pour la réduction des modèles d'état de systèmes thermiques linéaires sans transfert de masse. L'idée mise en ceuvre repose sur une partition de l'espace d'état modal en quelques sous-espaces orthogonaux. On montre ensuite comment la minimisation d'une erreur de sortie correspondant à la température spatio-temporelle peut s'effectuer indépendamment dans chacun des sous-espaces. L'utilisation de l'intégrale de Lyapunov permet alors d'obtenir de chaque sous-espace un pseudo-mode suffisamment représentatif de la dynamique du système. Une mesure significative de l'erreur de réduction est introduite pour quantifier la pertinence d'un modèle réduit. L'optimalité du modèle réduit obtenu par amalgame modal est explicitement démontrée au sens de cette mesure. L'article comprend une application des résultats sur un modèle de paroi

  13. Relap5/mod2 post-test calculation of a loss of feedwater experiment at the Pactel test facility

    Energy Technology Data Exchange (ETDEWEB)

    Protze, M. [Siemens-KWU, Erlangen (Germany)

    1995-12-31

    Post-test calculations for verification purposes of the thermal hydraulic code RELAP5/MOD2 are of fundamental importance for the licensing procedure. The RELAP5/MOD2 code has a large international assessment base regarding western PWR. WWER-reactors are russian designed PWRs with some specific differences compared with the western PWR`s, especially the horizontal steam generators. For that reason some post-test calculations have to be performed to verify the RELAP5/MOD2 code for these WWER typical phenomena. The impact of the horizontal steam generators on the accident behaviour during transients or pipe ruptures on the secondary side is significant. The nodalization of the test facility PACTEL was chosen equally to WWER plant nodalization to verify the use of a coarse modelling of the steam generator secondary side for analyses of transient with decreasing water level in the SG secondary side. The calculational results showed a good compliance to the test results, demonstrating the correct use of a coarse nodalization. To sum up, the RELAP5/ MOD2 results met the test results appropriately thereby the RELAP5/ MOD2 code is validated for analyses of transients with decreasing water level in a horizontal steam generator secondary side. (orig.). 4 refs.

  14. Improving containment mass and energy releases for CONTEMPT-LT/028 TU with RELAP5/MOD3

    International Nuclear Information System (INIS)

    DaSilva, H.C.; Choe, W.G.

    1996-01-01

    In order to obtain boundary conditions for RELAP5/MOD3 best estimate (BE) large break (LB) loss-of-coolant accident (LOCA) calculations, it is necessary to utilize a separate containment analysis code CONTEMPT-LT/028 TU, which in turn accepts mass and energy releases from the RELAP5/MOD3 calculation. When these boundary conditions are obtained, they are observed to be significantly lower than those reported in FSAR containment analyses. This motivates the present study, where RELAP5/MOD3 mass and energy releases are generated using the same assumptions listed in the FSAR containment calculations. Then CONTEMPT-LT/028 TU pressures and temperatures calculated with both sets of mass and energy releases are compared. It is seen that those obtained with the RELAP5/MOD3 input are still significantly lower, indicating a level of conservatism in the FSAR mass and energy releases that is even above that explicitly listed and also incorporated into the RELAP5/MOD3 calculation. An important conclusion from this finding is that Environmental Qualification (EQ) issues requiring containment re-analyses are likely to be easily resolved if new mass and energy releases are calculated with state-of-the-art LOCA codes modeling the entire reactor coolant system, even when conservative assumptions are incorporated

  15. GalMod: the last frontier of Galaxy population synthesis models

    Science.gov (United States)

    Pasetto, Stefano; Kollmeier, Juna; Grebel, Eva K.; chiosi, cesare

    2018-01-01

    We present a novel Galaxy population synthesis model: GalMod (Pasetto et al. 2016, 2017a,b) is the only star-count model featuring an asymmetric bar/bulge as well as spiral arms as directly obtained by applying linear perturbative theory to self-consistent distribution function of the Galaxy stellar populations. Compared to previous literature models (e.g., Besancon, Trilegal), GalMod allows to generate full-sky mock catalogue, M31 surveys and provides a better match to observed Milky Way (MW) stellar fields.The model can generate synthetic mock catalogs of visible portions of the MW, external galaxies like M31, or N-body simulation initial conditions. At any given time, e.g., a chosen age of the Galaxy, the model contains a sum of discrete stellar populations, namely bulge/bar, disk, halo. The disk population is itself the sum of subpopulations: spiral arms, thin disk, thick disk, and gas component, while the halo is modeled as the sum of a stellar component, a hot coronal gas, and a dark matter component. The Galactic potential is computed from these subpopulations' density profiles and used to generate detailed kinematics by considering the first few moments of the Boltzmann collisionless equation for all the stellar subpopulations. The same density profiles are then used to define the observed color-magnitude diagrams within an input field of view from an arbitrary solar location. Several photometric systems have been included and made available on-line, e.g., SDSS, Gaia, 2MASS, HST WFC3, and others. Finally, we model the extinction with advanced ray tracing solutions.The model's web page (and tutorial) can be accessed at www.GalMod.org.

  16. Du teikei à l’AMAP, un modèle acculturé

    Directory of Open Access Journals (Sweden)

    Jean Lagane

    2011-05-01

    Full Text Available Cet article compare à travers deux ethnographies en France et au Japon le modèle français de l’AMAP – association de maintien de l’agriculture paysanne – au modèle dont il se réclame, le teikei, système japonais de partenariat agricole entre producteurs et consommateurs. Terrain en mutation permanente, le développement des formes de circuit court et leurs emprunts accentuent lors de la transposition la nécessité de coller le plus étroitement possible à la réalité du terrain, à son histoire sociétale, à ses traditions institutionnelles et culturelles, à ses crises, à ses dynamiques. L’analyse fait apparaître à travers les similitudes, dissemblances et adaptations de ce modèle d’emprunt, l’incidence et la complexité de la prise en compte de facteurs culturels.After two ethnological fieldworks completed in France and Japan, this article deals with the French system of Community Supported Agriculture - AMAP - and its Japanese inspiration counterpart, the Teikei system built upon local solidarity-based partnerships between farmers and members. Constantly evolving, the growing process of agriculture one-shot sale circuits and the way they are received in other cultures recalls the necessity to tune with the reality of these societies, their history, their institutional and cultural traditions as well as their crises and dynamics. The analysis emphasizes the complexity of the acculturation process related with points of convergence and discrepancy.

  17. ModSAF-based development of operational requirements for light armored vehicles

    Science.gov (United States)

    Rapanotti, John; Palmarini, Marc

    2003-09-01

    Light Armoured Vehicles (LAVs) are being developed to meet the modern requirements of rapid deployment and operations other than war. To achieve these requirements, passive armour is minimized and survivability depends more on sensors, computers, countermeasures and communications to detect and avoid threats. The performance, reliability, and ultimately the cost of these systems, will be determined by the technology trends and the rates at which they mature. Defining vehicle requirements will depend upon an accurate assessment of these trends over a longer term than was previously needed. Modelling and simulation are being developed to study these long-term trends and how they contribute to establishing vehicle requirements. ModSAF is being developed for research and development, in addition to the original requirement of Simulation and Modelling for Acquisition, Rehearsal, Requirements and Training (SMARRT), and is becoming useful as a means for transferring technology to other users, researchers and contractors. This procedure eliminates the need to construct ad hoc models and databases. The integration of various technologies into a Defensive Aids Suite (DAS) can be designed and analyzed by combining field trials and laboratory data with modelling and simulation. ModSAF (Modular Semi-Automated Forces,) is used to construct the virtual battlefield and, through scripted input files, a "fixed battle" approach is used to define and implement contributions from three different sources. These contributions include: models of technology and natural phenomena from scientists and engineers, tactics and doctrine from the military and detailed analyses from operations research. This approach ensures the modelling of processes known to be important regardless of the level of information available about the system. Survivability of DAS-equipped vehicles based on future and foreign technology can be investigated by ModSAF and assessed relative to a test vehicle. A vehicle can

  18. Evaluation of fuel-temperature feedback mechanisms in TRAC-PF1/MOD2/NESTLE

    International Nuclear Information System (INIS)

    Knepper, Paula L.; Feltus, Madeline; Hochreiter, L.E.; Ivanov, Kostadin

    1999-01-01

    Coupled spatial kinetics and thermal-hydraulics system codes provide a means to model transient nuclear reactor behavior more accurately. Transients marked by strong perturbations, both with thermal-hydraulics and neutronics, such as a control-rod ejection or a main steam-line break, are especially of interest. It is now feasible to model complex reactor behavior with a coupled thermal-hydraulics and spatial kinetics code that provides a means to forecast safety margins. Recently, the Transient Reactor Analysis Code (TRAC)-PF1/MOD2, Version 5.4.25, was coupled with the NESTLE code. This coupled code (TRAC-PF1/MOD2/NESTLE) is used to examine effective fuel-temperature models. The Electric Power Research Institute (EPRI) rod-ejection benchmark was analyzed to evaluate the influence of effective fuel temperature. The rod-ejection transient tests only the fuel-rod, heat-conduction coupling. The coolant thermal-hydraulic coupling is not tested because of the speed of the transient. The neutronics solution changes extremely rapidly, whereas the convective heat transfer at the fuel surface requires more time to influence the coolant temperature of the system. The need to model the response of the system coolant temperature is not crucial in this analysis. The influence of the effective fuel temperature is the key component of this study. Various models were examined using the coupled code to calculate effective fuel temperatures. The influence of different, effective fuel-temperature models on the coupled-code results is studied. Three effective fuel-temperature models are examined: (l) volume average effective fuel temperature, (2) the effective fuel-temperature model suggested by the Office of Economic Cooperation and Development (OECD) rod-ejection benchmark, and (3) the NESTLE effective fuel-temperature model. A discussion is provided describing the effective fuel-temperature models examined in TRAC-PF1/MOD2/NESTLE and the influence of effective fuel temperature in

  19. Resistance of solanum species to phytophthora infestans evaluated in the detached-leaf and whole-plant assays

    International Nuclear Information System (INIS)

    Akhtar, K.P.; Saleem, M.Y.; Asghar, M.

    2012-01-01

    The reaction of 82 tomato genotypes belonging to 8 Solanum and a Lycopersicon species against Phytophthora infestans causing late blight was determined using detached-leaf and whole-plant assays. None of the test genotypes was immune or highly resistant. Of the 82 commercial and wild genotypes only TMS-2 (male-sterile and characterized by indeterminate growth) belonging to Lycopersicon esculentum was resistant with severity index of 2.4 in the detached-leaf assay on 0-5 scale (where 5 was highly susceptible) and percent disease index (%DI) of 23.3% under the whole-plant assay. Among the remaining genotypes, 41 were susceptible and 40 were highly susceptible under the detached-leaf assay, while 18 were susceptible and 63 were highly susceptible under the whole-plant assay. However, there was a significant difference in %DI for genotypes under the whole-plant assay. The response of whole-plants to inoculation with P. infestans in the detached-leaf assay was similar in all cases. The overall screening results indicate that TMS-2 is a good source of resistance and it can be useful for the development of tomato hybrid cultivars resistant to late blight. (author)

  20. Posttest TRAC-PD2/MOD1 predictions for FLECHT SEASET test 31504

    International Nuclear Information System (INIS)

    Booker, C.P.

    1982-01-01

    TRAC-PD2/MOD1 is a publicly released version of TRAC that is used primarily to analyze large-break loss-of-coolant accidents in pressurized-water reactors (PWRs). TRAC-PD2 can calculate, among other things, reflood phenomena. TRAC posttest predictions are compared with test 31504 reflood data from the Full-Length Emergency Core Heat Transfer (FLECHT) System Effects and Separate Effects Tests (SEASET) facility. A false top-down quench is predicted near the top of the core and the subcooling is underpredicted at the bottom of the core. However, the overall TRAC predictions are good, especially near the center of the core

  1. Evaluation of void fraction measurements from DADINE experience using RELAP4/MOD5 code

    International Nuclear Information System (INIS)

    Borges, R.C.; Freitas, R.L.

    1989-01-01

    The DADINE experiment measures the axial evolution of the void fraction by neutronic diffusion in two-phase flow in the wet regions of a pressurized water reactor in accident conditions. Since the theoretical/experimental confrontation is important for code evaluation, this paper presents the simulation with the RELAP4/MOD5 Code of the void fractions results obtained in the DADINE Experiment, that showed some deviation probably associated with the existing models in Code, special attention in the way of stablishing the two-phase flow and the no characterization of the differents flow regimes related with the void fractions. (author) [pt

  2. TRAC-BDl/MOD1 post-dryout wall heat transfer

    International Nuclear Information System (INIS)

    Shumway, R.W.

    1984-01-01

    A comparison of TRAC-BWR heat transfer package with 766 data points is presented. On the average, TRAC-BWR provides a better prediction of the data compared to any single correlation although there is still a large scatter in TRAC-BWR prediction. Regarding any potential changes in the TRAC-BD1/MOD1 wall heat transfer package, it is concluded that no significant improvement in the film boiling area can be made until data with better measurements are obtained and analyzed. Specifically, data is needed which has a wide range of accurately measured void fractions. Heated tube data is also needed which addresses the countercurrent flow transition conditions

  3. RELAP5/MOD1.5 and CESEC-III steamline break comparison

    International Nuclear Information System (INIS)

    Peeler, G.B.; Caraher, D.L.; Guttmann, J.

    1983-01-01

    Argonne National Laboratory (ANL) performed audit calculations using RELAP5/MOD1.5 (Cycle 26) of a large steamline break during full power operation of a C-E System 80 plant with concurrent loss of offsite power and compared the results with CESEC-III predictions. The objective was to audit the vendor's analytical methodology and to examine the impact of mixing of cold primary fluid returning from the affected steam generator with the hot fluid returning from the intact steam generator, and its effect upon the potential return to power due to moderator reactivity feedback

  4. Effect of noncondensible gas on natural circulation in the semiscale Mod-2A facility

    International Nuclear Information System (INIS)

    Soda, K.; Loomis, G.G.

    1983-01-01

    Results are presented from an experimental investigation of the effect on noncondensible gas on natural circulation in a scaled model of a pressurized water reactor primary coolant system (Semiscale Mod-2A). Specifically, the effect of various nitrogen gas concentrations (in the coolant) on steady, two-phase and reflux natural circulation cooling modes has been identified and quantified. The Semiscale experiments were performed at high temperatures and pressure (6.1 to 11.1 MPa) and included visual observations at key piping locations which aided in the interpretation of the data

  5. Development and assessment of a modified version of RELAP5/MOD3

    Energy Technology Data Exchange (ETDEWEB)

    Analytis, G.T. [Paul Scherrer Institute, Villigen (Switzerland)

    1995-09-01

    A summary of a number of modifications introduced in RELAP/MOD3 is presented. These include implementation of different heat transfer packages for different processes, modification of the low mass-flux Groeneveld CHF look-up table and of the dispersed flow interfacial area (and shear) as well as of the criterion for transition into and out from this regime, elimination of the under-relaxation schemes of the interfacial closure coefficients etc. The modified code is assessed against a number of separate-effect and integral test experiments and in contrast to the frozen version, is shown to result in physically sound predictions which are close to the measurements.

  6. Implementation of a nonequilibrium condensation model in RELAP4/MOD7

    International Nuclear Information System (INIS)

    Fischer, S.R.; Chow, H.; Van Arsdall, G.

    1979-01-01

    RALAp, which is used to simulate the thermal hydraulic behavior of light water reactors subjected to various LOCA transients, is based on the assumption of thermodynamic equilibrium between liquid and vapor within fluid volumes. This assumption, while being appropriate for much of a LOCA transient, is not adequate during the ECC accumulator injection phase as determined by comparisons of code calculations with experimental data. To overcome this limitation, a general model to simulate the nonequilibrium phenomena associated with the mixing of subcooled water with saturated steam has been developed and is operational on preliminary versions of RELAP4/MOD7

  7. Impurity transport in the divertor of the Alcator C-Mod tokamak

    International Nuclear Information System (INIS)

    McCracken, G.M.; Bombarda, F.; Graf, M.; Goetz, J.A.; Jablonski, D.; Kurz, C.; Labombard, B.; Lipschultz, B.; Rice, J.; Welch, B.

    1995-01-01

    Argon has been injected into the private flux zone of the Alcator C-Mod divertor and its transport into the confined plasma studied. The injected gas pulse lasts for about 200 ms, but the impurity concentration increases to an equilibrium level and remains there for similar 200 ms. It is clear that the argon is acting as a recycling impurity. Nevertheless it has been observed that less than 0.5% of the injected atoms reach the confined plasma and that the percentage decreases with increasing plasma density. The good impurity screening is discussed in terms of the ionisation mean free path in the divertor. ((orig.))

  8. Effets d'agents antimicrobiens sur un modèle de biofilm dentaire "in vitro"

    OpenAIRE

    Takinami, Hiroyuki; Baehni, Pierre

    2007-01-01

    L'objectif de cette étude était d'évaluer l'effet d'agents antimicrobiens sur un modèle de biofilm. Des disques d'hydroxypatite sont incubés en présence de 4 espèces bactérienne ("Actinomyces naeslundii, Fusobacterium nucleatum, Streptococcus oralis, Veillonella dispar") en milieu anaérobie pendant 12h (biofilm immature) ou 73h (biofilm mature). Les biofilms ont alors été exposés 3x 1min à la chlorhexidine(CHX), triclosan (TRI), cetylpyridinium chloride (CPC) et isopropyl methylphenol (IPMP)....

  9. Influence of doxorubicin on fluconazole susceptibility and efflux pump gene expression of Candida dubliniensis.

    LENUS (Irish Health Repository)

    Schulz, Bettina

    2012-05-01

    The effect of doxorubicin (DOX) on the fluconazole (FLU) susceptibility of C. dubliniensis was investigated. Isolates were exposed to DOX and FLU in a chequerboard assay and resistance gene expressions were analysed after DOX exposure. The susceptibility of the yeast to FLU was decreased in the presence of DOX in the chequerboard assay with FIC indices suggesting an antagonistic effect. Gene expression analyses showed an overexpression of CdCDR2. Hence, DOX was found to have an impact on resistance mechanisms in C. dubliniensis isolates.

  10. Evaluation and assessment of reflooding models in RELAP5/Mod2.5 and RELAP5/Mod3 codes using Lehigh University and PSI-Neptun bundle experimental data

    Energy Technology Data Exchange (ETDEWEB)

    Sencar, M.; Aksan, N. [Paul Scherrer Institute, Villigen (Switzerland)

    1995-09-01

    An extensive analysis and assessment work on reflooding models of RELAP5/Mod2.5 and, RELAP5/Mod3/v5m5 and RELAP/Mod3/v7j have been performed. Experimental data from LehighUniversityv. and PSI-NEPTUN bundle reflooding experiments have been used for the assessment, since both of these tests cover a broad range of initial conditions. Within the range of these initial conditions, it was tried to identify their separate impacts on the calculated results. A total of six Lehigh University reflooding bundle tests and two PSI-NEPTUN tests with bounding initial conditions are selected for the analysis. Detailed nodalisation studies both for hydraulic and conduction heat transfer were done. On the basis of the results obtained from these cases, a base nodalisation scheme was established. All the other analysis work was performed by using this base nodalisation. RELAP5/Mod2.5 results do not change with renodalisation but RELAP5/Mod3 results are more sensitive to renodalisation. The results of RELAP5/Mod2.5 versions show very large deviations from the used experimental data. These results indicate that some of the phenomenology of the events occurring during the reflooding could not be identified. In the paper, detailed discussions on the main reasons of the deviations from the experimental data will be presented. Since, the results and findings of this study are meant to be a developmental aid, some recommendations have been drawn and some of these have already been implemented at PSI with promising results.

  11. Multiple drug-susceptibility screening in Mycobacterium bovis: new nucleotide polymorphisms in the embB gene among ethambutol susceptible strains

    Directory of Open Access Journals (Sweden)

    Cinzia Marianelli

    2015-04-01

    Conclusion: All M. bovis isolates were sensitive to the most common antituberculosis drugs used for treatment. There was a good agreement between the d-REMA assay and the agar based reference method. Among ethambutol susceptible isolates, four new embB mutations were found.

  12. Experiment data report for Semiscale Mod-1 test S-28-3 (steam generator tube rupture test). [PWR

    Energy Technology Data Exchange (ETDEWEB)

    Gillins, R.L.; Sackett, K.E.

    1977-10-01

    Recorded test data are presented for Test S-28-3 of the Semiscale Mod-1 steam generator tube rupture test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying a hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-28-3 was conducted from initial conditions of 15621 kPa and 555 K to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the broken loop cold leg piping. During the test, cooling water was injected into the cold leg of the intact and broken loops to simulate emergency core coolant injection in a PWR. Twelve steam generator tube ruptures were simulated by a controlled injection from a heated accumulator into the intact loop hot leg.

  13. Experiment data report for Semiscale Mod-1 Test S-28-1 (steam generator tube rupture test series)

    Energy Technology Data Exchange (ETDEWEB)

    Collins, B.L.; Coppin, C.E.; Sackett, K.E.

    1977-10-01

    Recorded test data are presented for Test S-28-1 of the Semiscale Mod-1 steam generator tube rupture test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying a hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-28-1 was conducted from initial conditions of 15 767 kPa and 557 K to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the broken loop cold leg piping. During the test, cooling water was injected into the cold leg of the intact and broken loops to simulate emergency core coolant injection in a PWR. Sixty steam generator tube ruptures were simulated by a controlled injection from a heated accumulator into the intact loop hot leg.

  14. Experiment data report for semiscale Mod-1 test S-28-4 (steam generator tube rupture test)

    Energy Technology Data Exchange (ETDEWEB)

    Esparza, V.; Sackett, K.E.

    1977-10-01

    Recorded test data are presented for Test S-28-4 of the Semiscale Mod-1 steam generator tube rupture test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying a hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-28-4 was conducted from initial conditions of 15 646 kPa and 557 K to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the broken loop cold leg piping. During the test, cooling water was injected into the cold leg of the intact and broken loops to simulate emergency core coolant injection in a PWR. Thirty steam generator tube ruptures were simulated by a controlled injection from a heated accumulator into the intact loop hot leg.

  15. Experiment data report for Semiscale Mod-1 test S-28-6 (steam generator tube rupture test)

    Energy Technology Data Exchange (ETDEWEB)

    Patton, M.L.; Sackett, K.E.; Coppin, C.E.

    1977-11-01

    Recorded test data are presented for Test S-28-6 of the Semiscale Mod-1 steam generator tube rupture test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying a hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-28-6 was conducted from initial conditions of 15,770 kPa and 557 K to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the broken loop cold leg piping. During the test, cooling water was injected into the cold leg of the intact and broken loops to simulate emergency core coolant injection in a PWR. Sixteen steam generator tube ruptures were simulated by a controlled injection from a heated accumulator into the intact loop hot leg.

  16. Experiment data report for semiscale Mod-1 test S-28-2 (steam generator tube rupture test). [PWR

    Energy Technology Data Exchange (ETDEWEB)

    Patton, M.L.; Sackett, K.E.

    1977-10-01

    Recorded test data are presented for Test S-28-2 of the Semiscale Mod-1 steam generator tube rupture test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying a hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-28-2 was conducted from initial conditions of 15 936 kPa and 558 K to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the broken loop cold leg piping. During the test, cooling water was injected into the cold leg of the intact and broken loops to simulate emergency core coolant injection in a PWR. For Test S-28-2, accumulator injection into the intact loop hot leg was provided to simulate simulate the rupture of six steam generator tubes.

  17. Experiment data report for Semiscale Mod-1 Test S-28-5 (steam generator tube rupture test). [PWR

    Energy Technology Data Exchange (ETDEWEB)

    1977-11-01

    Recorded test data are presented for Test S-28-5 of the Semiscale Mod-1 steam generator tube rupture test series. These tests are among several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying a hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-28-5 was conducted from initial conditions of 15,768 kPa and 556 K to investigate the response of the Semiscale Mod-1 system to a depressurization and reflood transient following a simulated double-ended offset shear of the broken loop cold leg piping. During the test, cooling water was injected into the cold leg of the intact and broken loops to simulate emergency core coolant injection in a PWR. For Test S-28-5, accumulator injection into the intact loop hot leg was provided to simulate the rupture of 20 steam generator tubes.

  18. Assessment of RELAP5/MOD3.2 with condensation experiment in the presence of noncondensables in a vertical tube

    Energy Technology Data Exchange (ETDEWEB)

    Park, Hyun Sik; No, Hee Cheon [Korea Advanced Institute of Science and Technology, Taejon (Korea, Republic of)

    1998-12-31

    The standard RELAP5/MOD3.2 code were assessed with the condensation experiment in the presence of noncondensable gas in a vertical tube of PCCS of CP-1300. There are two wall film condensation models, the default model and the alternative model, in RELAP5/MOD3.2. The experimental apparatus was modeled with the two models, and simulations were performed for several sub-tests to be compared with the experimental results. In overall sense the simulation results showed that the default model of RELAP5/MOD3.2 under-predicts the heat transfer coefficients, while the alternative model over-predicts them throughout the condensing tube. 10 refs., 6 figs. (Author)

  19. Comparison of two assays for molecular determination of rifampin resistance in clinical samples from patients with Buruli ulcer disease.

    Science.gov (United States)

    Jansson, Moritz; Beissner, Marcus; Phillips, Richard Odame; Badziklou, Kossi; Piten, Ebekalisai; Maman, Issaka; Sarfo, Fred Stephen; Huber, Kristina Lydia; Rhomberg, Agata; Symank, Dominik; Wagner, Magdalena; Wiedemann, Franz; Nitschke, Jörg; Banla Kere, Abiba; Herbinger, Karl-Heinz; Adjei, Ohene; Löscher, Thomas; Bretzel, Gisela

    2014-04-01

    This study evaluates a novel assay for detecting rifampin resistance in clinical Mycobacterium ulcerans isolates. Although highly susceptible for PCR inhibitors in 50% of the samples tested, the assay was 100% M. ulcerans specific and yielded >98% analyzable sequences with a lower limit of detection of 100 to 200 copies of the target sequence.

  20. Comparison of Two Assays for Molecular Determination of Rifampin Resistance in Clinical Samples from Patients with Buruli Ulcer Disease

    OpenAIRE

    Jansson, Moritz; Beissner, Marcus; Phillips, Richard Odame; Badziklou, Kossi; Piten, Ebekalisai; Maman, Issaka; Sarfo, Fred Stephen; Huber, Kristina Lydia; Rhomberg, Agata; Symank, Dominik; Wagner, Magdalena; Wiedemann, Franz; Nitschke, Jörg; Banla Kere, Abiba; Herbinger, Karl-Heinz

    2014-01-01

    This study evaluates a novel assay for detecting rifampin resistance in clinical Mycobacterium ulcerans isolates. Although highly susceptible for PCR inhibitors in 50% of the samples tested, the assay was 100% M. ulcerans specific and yielded >98% analyzable sequences with a lower limit of detection of 100 to 200 copies of the target sequence.

  1. A Unified Model for Slug Flow Generation Modélisation de la formation des bouchons : vers un modèle stochastique unifié

    Directory of Open Access Journals (Sweden)

    Bernicot M.

    2006-11-01

    Full Text Available In order to improve the global safety and reliability level of multi-phase production systems and to guarantee their economical efficiency, we need a better understanding and control of hydraulic instabilities observed at the outlet of multi-phase sea-lines. This may be obtained through the development of slug flow stochastic models, which must be able to explain:(a The generation of the various types of slug length distributions which are observed on experimental data sets. (b The evolution of these distributions along the sea-lines up to their outlets, where large hydraulic fluctuations may be dangerous for the treatment installations. Based on experimental as well as theoretical arguments, we present such a model with emphasis on slug generation. We give a detailed theoretical analysis, together with a discussion of the underlying assumptions which justify the introduction of this model. Ce résumé contient des formules (*** qui ne peuvent s'afficher à l'écran. Pour garantir à la fois la sûreté de fonctionnement et la rentabilité des systèmes de production avec transport polyphasique, il est nécessaire de mieux comprendre et maîtriser les phénomènes d'instabilité hydraulique dans les conduites polyphasiques. Ceci suppose la mise au point et l'utilisation de Modèles de Simulation des écoulements portant, non seulement sur l'évolution dans le temps et en tout point de la conduite des valeurs moyennes des diverses variables (cf. le modèle TACITE, mais aussi sur leurs aspects stochastiques en prenant spécialement en compte : - les lois statistiques propres des divers mécanismes fondamentaux de formation des bouchons (distribution des longueurs de bouchons de liquide et de poches de gaz; - l'évolution de ces lois statistiques dans le temps et tout le long de la conduite (et ceci, jusqu'à son extrémité, extrémité dont les caractéristiques intéressent tout spécialement l'opérateur de la conduite. Nous présenterons ici

  2. Scaling criteria and an assessment of Semiscale Mod-3 scaling for small-break loss-of-coolant transients

    International Nuclear Information System (INIS)

    Larson, T.K.; Anderson, J.L.; Shimeck, D.J.

    1982-01-01

    Various methods of scaling fluid thermal-hydraulic test facilities and their relative merits and disadvantages are examined in light of nuclear reactor safety considerations. Particular emphasis is placed on examination of the scaling of the Semiscale Mod-3 system and determination of thermal-hydraulic phenomena thought to be important during a small break loss-of-coolant accident in a pressurized water nuclear reactor. The influence of geometric and dynamic scaling concerns in the Mod-3 system on small break behavior are addressed from an engineering viewpoint and corrective measures contemplated or required to make results from Semiscale tests more meaningful relative to expected PWR response are discussed

  3. Effect of vortex generators on the power conversion performance and structural dynamic loads of the Mod-2 wind turbine

    Science.gov (United States)

    Sullivan, T. L.

    1984-01-01

    Applying vortex generators from 20 to 100 percent span of the Mod-2 rotor resulted in a projected increase in annual energy capture of 20 percent and reduced the wind speed at which rated power is reached by nearly 3 m/sec. Application of vortex generators from 20 to 70 percent span, the fixed portion of the Mod-2 rotor, resulted in a projected increase in annual energy capture of about half this. This improved performance came at the cost of a small increase in cyclic blade loads in below rated power conditions. Cyclic blade loads were found to correlate well with the change in wind speed during one rotor revolution.

  4. RELOS.MOD2: a code system for the determination of instationary fission product releases from molten pools

    Energy Technology Data Exchange (ETDEWEB)

    Kortz, Ch.; Koch, M.K.; Unger, H. [Department for Nuclear and New Energy Systems (NES), Ruhr-University Bochum (RUB), Bochum (Germany); Funke, F.

    1999-07-01

    For the assessment of molten corium pool source terms, a mechanistic model has been developed to describe the transport of fission products from liquid corium pool surfaces into a colder gas atmosphere. Modelling is based on an approach for diffusive and convective transport processes coupled with thermochemical equilibrium considerations enabling detailed speciation analyses of the fission products released. Both have been implemented into the code system RELOS.MOD2. RELOS.MOD2 sensitivity calculations on possible effects of anticipated uncertainties in the thermo-chemical data on the fission product release predictions are presented. (author)

  5. RELOS.MOD2: a code system for the determination of instationary fission product releases from molten pools

    International Nuclear Information System (INIS)

    Kortz, Ch.; Koch, M.K.; Unger, H.; Funke, F.

    1999-01-01

    For the assessment of molten corium pool source terms, a mechanistic model has been developed to describe the transport of fission products from liquid corium pool surfaces into a colder gas atmosphere. Modelling is based on an approach for diffusive and convective transport processes coupled with thermochemical equilibrium considerations enabling detailed speciation analyses of the fission products released. Both have been implemented into the code system RELOS.MOD2. RELOS.MOD2 sensitivity calculations on possible effects of anticipated uncertainties in the thermo-chemical data on the fission product release predictions are presented. (author)

  6. A review of analyses of LOFT and semiscale tests made at IDAHO National Engineering Laboratory using RELAP5/MOD1

    International Nuclear Information System (INIS)

    Hall, P.C.

    1984-03-01

    Within the LOFT and Semiscale programs at INEL, many post-test analysis calculations have been performed using RELAP5/MOD1. In this report, these calculations are reviewed from the standpoint of assessing the performance of the code. Because the calculations were spread over a number of years, different cycles of RELAP5/MOD1 have been employed. Rather than explicitly assessing several cycles of the code, a more general view has been adopted and an attempt has been made to identify those areas in which the code is systematically successful or alternatively, frequently experiences difficulties. (author)

  7. Sensitivity of MODIS evapotranspiration algorithm (MOD16) to the acuracy of meteorological data and land use and land cover parameterization

    Science.gov (United States)

    Ruhoff, Anderson; Santini Adamatti, Daniela

    2017-04-01

    MODIS evapotranspiration (MOD16) is currently available with 1 km of spatial resolution over 109.03 Million km2 of vegetated land surface areas and this information is widely used to evaluate the linkages between hydrological, energy and carbon cycles. The algorithm is driven by meteorological reanalysis data and MODIS remotely-sensed data, which include land use and land cover classification (MCD12Q1), leaf area index (LAI) and fraction of absorbed photosynthetically active radiation (FPAR) (MOD15A2) and albedo (MOD43b3). For calibration and parameterization, the algorithm uses a Biome Property Look-up Table (BPLUT) based on MCD12Q1 land cover classification. Several studies evaluated MOD16 accuracy using evapotranspiration measurements and water balance analysis, showing that this product can reproduce global evapotranspiration effectively under a variety climate condition, from local to wide-basin scale, with uncertainties up to 25%. In this study, we evaluated the sensitivity of MOD16 algorithm to land use and land cover parameterization and to meteorological data. Considering that MCD12Q1 has an accuracy between 70 and 85% at continental scale, we changed land cover parametererization to understand the influence of land use and land cover classification on MOD16 evapotranspiration estimations. Knowing that meteorological reanalysis data also have uncertainties (mostly related to the coarse spatial resolution), we compared MOD16 evapotranspiration driven by observed meteorological data to those driven by the reanalysis data. Our analysis were carried in South America, with evapotranspiration and meteorological measurements from the Large-Scale Biosphere-Atmosphere Experiment in Amazonia (LBA) at 8 different sites, including tropical rainforest, tropical dry forest, selective logged forest, seasonal flooded forest and pasture/agriculture. Our results indicate that land use and land cover classification has a strong influence on MOD16 algorithm. The use of

  8. Vold og seksuelle overgreb mod børn og unge med handicap

    DEFF Research Database (Denmark)

    Holt, Helle; Christoffersen, Mogens; Poulsen, Maria Hedemark

    Formålet med denne rapport er at styrke vidensgrundlaget om vold og seksuelle overgreb mod børn og unge med handicap. Til det formål belyses omfanget af overgreb, ofrenes karakteristik, risiko- og beskyttelsesfaktorer samt fagfolks arbejde med mistanke, opsporing og handling. Undersøgelsens analyse...... består af tre dele: Første del belyser omfanget af vold og seksuelle overgreb mod børn og unge med handicap, baseret på oplysninger om politianmeldte sager og registeroplysninger. Anden del belyser børn og unges egne oplevelser med overgreb, baseret på eksisterende spørgeskemadata fra henholdsvis...... Børneforløbsundersøgelsen og Forløbsundersøgelsen af anbragte børn. Tredje del belyser fagpersoners daglige arbejde på området om opsporing og forebyggelse af ovegreb med børn og unge med handicap, baseret på en mindre spørgeskemaundersøgelse til fagpersoner på specialområdet samt enkelte interview med videnspersoner...

  9. Experiment data report for Semiscale Mod-1 Test S-05-2 (alternate ECC injection test)

    Energy Technology Data Exchange (ETDEWEB)

    Feldman, E. M.; Collins, B. L.; Sackett, K. E.

    1977-02-01

    Recorded test data are presented for Test S-05-2 of the Semiscale Mod-1 alternate emergency core coolant (ECC) injection test series. This test is one of several Semiscale Mod-1 experiments conducted to investigate the thermal and hydraulic phenomena accompanying a hypothesized loss-of-coolant accident in a pressurized water reactor (PWR) system. Test S-05-2 was conducted from an initial cold leg fluid temperature of 545/sup 0/F and an initial pressure of 2263 psia. A simulated double-ended offset shear cold leg break was used to investigate core and system response to a depressurization and reflood transient with ECC injection at the intact loop pump suction and broken loop cold leg. A reduced lower plenum volume was used for this test to more accurately represent the lower plenum of a PWR, based on system volume scaling. System flow was set to achieve a core fluid temperature differential of 65/sup 0/F at a core power level of 1.44 MW. The flow resistance of the intact loop was based on core area scaling. An electrically heated core with a slightly peaked radial power profile was used in the pressure vessel to simulate the predicted surface heat flux of nuclear fuel rods during a loss-of-coolant accident.

  10. Modèles aléatoires en écologie et évolution

    CERN Document Server

    Méléard, Sylvie

    2016-01-01

    Le but du livre est de définir et développer une grande gamme d'outils probabilistes pour la modélisation en biologie des populations, afin de décrire des dynamiques temporelles de quantités biologiques telles que la taille d'une ou plusieurs populations, la proportion d'un allèle dans une population ou la position d'un individu. En partant de modèles markoviens discrets (marches aléatoires, processus de Galton-Watson), nous abordons progressivement le calcul stochastique et les équations différentielles stochastiques, puis les processus markoviens de saut, tels les processus de branchement à temps continu et les processus de naissance et mort. Nous étudions également les processus discret et continu pour l'évolution génétique et les généalogies: processus de Wright-Fisher et coalescent. Le livre détaille systématiquement les calculs de quantités d'intérêt pour les biologistes. De nombreux exercices d'application sont proposés. Le dernier chapitre montre l'apport de ces outils pour des...

  11. Detailed Post Analysis of HERMES-HALF Experiment using RELAP5/MOD3

    Energy Technology Data Exchange (ETDEWEB)

    Park, Rae Joon; Kang, Kyung Ho; Ha, Kwang Soon; Cho, Young Ro; Koo, Kil Mo; Kim, Sang Baik; Kim, Hee Dong

    2005-03-15

    As part of a study on a two-phase natural circulation flow between the outer reactor vessel and the insulation material in the reactor cavity under an external reactor vessel cooling of APR1400, a HERMES-HALF experiment has been analyzed to verify and evaluate the experimental results using the RELAP5/MOD3 computer code. The RELAP5/MOD3 results have shown that the water circulation mass flow rate is very similar to the experimental results of the HERMES-HALF, in general. Increases in the water inlet area and the water level in the reactor cavity lead to an increase in the water circulation mass flow rate. In the small water inlet area condition, the lower value of the water outlet area has an effect on the water circulation mass flow rate, but the larger value of this has no effect. The air injection mass flow rate has no effect on the water circulation mass flow rate when it is greater than 40 % at the small water inlet area condition. However, an increase in the air injection mass flow rate leads to an increase in the water circulation mass flow rate. In the large water inlet area condition, increases in the water outlet area and the air injection mass flow rate lead to an increase in the water circulation mass flow rate. As the water outlet moves to a lower position, the water circulation mass flow rate slowly increases.

  12. Vertical localization of phase contrast imaging diagnostic in Alcator C-Mod

    Science.gov (United States)

    Lin, L.; Edlund, E. M.; Porkolab, M.; Lin, Y.; Wukitch, S. J.

    2006-10-01

    Phase contrast imaging (PCI) diagnostic has been used to study mode conversion physics of ion cyclotron range of frequency waves [E. Nelson-Melby et al., Phys. Rev. Lett. 90, 155004 (2003)], plasma turbulence [A. Mazurenko et al., Phys. Rev. Lett. 89, 225004 (2002); N. Basse et al., Phys. Plasmas 12, 052512 (2005)], and Alfvén Cascades [M. Porkolab et al., IEEE Trans. Plasma Sci. 34, 229 (2006)] in Alcator C-Mod. The C-Mod PCI system measures line integrated electron density fluctuations along 32 vertical chords with a sampling frequency of 10MHz and wavenumber resolution up to 30cm-1. Although PCI normally lacks localization along the chords, the vertical variation of the magnetic field pitch angle allows for localized measurements for large k⊥ fluctuations. A system consisting of a partially masked phase plate on a rotatable stage has been installed and quasicoherent modes with wave number ˜5cm-1 associated with the enhanced DαH mode at the top and bottom of the plasma have been differentiated. In future experiments, for k ˜30cm-1, a spatial resolution of r /a˜0.3 can be achieved under ideal conditions.

  13. Edge plasma physics modifications due to magnetic ripple in RFX-mod

    International Nuclear Information System (INIS)

    Scarin, P.; Agostini, M.; Carraro, L.; Cavazzana, R.; Ciaccio, G.; De Masi, G.; Spizzo, G.; Spolaore, M.; Vianello, N.

    2015-01-01

    The edge of the RFX-mod (R = 2 m, a = 0.46 m) Reversed Field Pinch is characterized by weak magnetic chaos affecting ion and electron diffusion. Edge particle transport is strongly influenced by a toroidal asymmetry caused by magnetic islands. An ambipolar radial electric field ensures local neutrality and possesses the same symmetry as the parent magnetic ripple: the result is the modulation of the perpendicular flow, with a slowing-down at the island X-point. In this paper we present a complete statistical analysis, over a large database of RFX-mod discharges, of the edge properties as they are modified by the magnetic topology: the plasma wall footprint follows the helical shape of the dominant central mode (m/n = 1/7), with an increase of H α emission and electron density corresponding to the O-point of the inner magnetic island. Edge turbulence is modified by the magnetic topology, being generated in the O-point region and damped near the X-point

  14. An assessment of the CORCON-MOD3 code. Part 1: Thermal-hydraulic calculations

    Energy Technology Data Exchange (ETDEWEB)

    Strizhov, V.; Kanukova, V.; Vinogradova, T.; Askenov, E. [Russian Academy of Sciences, Moscow (Russian Federation). Inst. of Nuclear Safety; Nikulshin, V. [Russian Research Center, Moscow (Russian Federation). Kurchatov Inst.

    1996-09-01

    This report deals with the subject of CORCON-Mod3 code validation (thermal-hydraulic modeling capability only) based on MCCI (molten core concrete interaction) experiments conducted under different programs in the past decade. Thermal-hydraulic calculations (i.e., concrete ablation, melt temperature, melt energy, concrete temperature, and condensible and non-condensible gas generation) were performed with the code, and compared with the data from 15 experiments, conducted at different scales using both simulant (metallic and oxidic) and prototypic melt materials, using different concrete types, and with and without an overlying water pool. Sensitivity studies were performed in a few cases involving, for example, heat transfer from melt to concrete, condensed phase chemistry, etc. Further, special analysis was performed using the ACE L8 experimental data to illustrate the differences between the experimental and the reactor conditions, and to demonstrate that with proper corrections made to the code, the calculated results were in better agreement with the experimental data. Generally, in the case of dry cavity and metallic melts, CORCON-Mod3 thermal-hydraulic calculations were in good agreement with the test data. For oxidic melts in a dry cavity, uncertainties in heat transfer models played an important role for two melt configurations--a stratified geometry with segregated metal and oxide layers, and a heterogeneous mixture. Some discrepancies in the gas release data were noted in a few cases.

  15. RELAP5/MOD2 implementation on various mainframes including the IBM and SX-2 supercomputer

    International Nuclear Information System (INIS)

    DeForest, D.L.; Hassan, Y.A.

    1987-01-01

    The RELAP5/MOD2 (cycle 36.04) code is a one-dimensional, two-fluid, nonequilibrium, nonhomogeneous transient analysis code designed to simulate operational and accident scenarios in pressurized water reactors (PWRs). System models are solved using a semi-implicit finite difference method. The code was developed at EG and G in Idaho Falls under sponsorship of the US Nuclear Regulatory Commission (NRC). The major enhancement from RELAP5/MOD1 is the use of a six-equation, two-fluid nonequilibrium and nonhomogeneous model. Other improvements include the addition of a noncondensible gas component and the revision and addition of drag formulation, wall friction, and wall heat transfer. Several test cases were run to benchmark the IBM and SX-2 installations against the CDC computer and the CRAY-2 and CRAY/XMP. These included the Edward's pipe blow-down and two separate reflood cases developed to simulate the FLECHT-SEASET reflood test 31504 and a postcritical heat flux (CHF) test performed at Lehigh University

  16. ICRF antenna matching system with ferrite tuners for the Alcator C-Mod tokamak

    Science.gov (United States)

    Lin, Y.; Binus, A.; Wukitch, S. J.; Koert, P.; Murray, R.; Pfeiffer, A.

    2015-12-01

    Real-time fast ferrite tuning (FFT) has been successfully implemented on the ICRF antennas on Alcator C-Mod. The former prototypical FFT system on the E-port 2-strap antenna has been upgraded using new ferrite tuners that have been designed specifically for the operational parameters of the Alcator C-Mod ICRF system (˜ 80 MHz). Another similar FFT system, with two ferrite tuners and one fixed-length stub, has been installed on the transmission line of the D-port 2-strap antenna. These two systems share a Linux-server-based real-time controller. These FFT systems are able to achieve and maintain the reflected power to the transmitters to less than 1% in real time during the plasma discharges under almost all plasma conditions, and help ensure reliable high power operation of the antennas. The innovative field-aligned (FA) 4-strap antenna on J-port has been found to have an interesting feature of loading insensitivity vs. plasma conditions. This feature allows us to significantly improve the matching for the FA J-port antenna by installing carefully designed stubs on the two transmission lines. The reduction of the RF voltages in the transmission lines has enabled the FA J-port antenna to deliver 3.7 MW RF power to plasmas out of the 4 MW source power in high performance I-mode plasmas.

  17. Thermal enhancement cartridge heater modified (TECH Mod) tritium hydride bed development, Part 1 - Design and fabrication

    Energy Technology Data Exchange (ETDEWEB)

    Klein, J.E.; Estochen, E.G. [Savannah River National Laboratory, Aiken, SC (United States)

    2015-03-15

    The Savannah River Site (SRS) tritium facilities have used first generation (Gen1) LaNi{sub 4.25}Al{sub 0.75} (LANA0.75) metal hydride storage beds for tritium absorption, storage, and desorption. The Gen1 design utilizes hot and cold nitrogen supplies to thermally cycle these beds. Second and third generation (Gen2 and Gen3) storage bed designs include heat conducting foam and divider plates to spatially fix the hydride within the bed. For thermal cycling, the Gen2 and Gen3 beds utilize internal electric heaters and glovebox atmosphere flow over the bed inside the bed external jacket for cooling. The currently installed Gen1 beds require replacement due to tritium aging effects on the LANA0.75 material, and cannot be replaced with Gen2 or Gen3 beds due to different designs of these beds. At the end of service life, Gen1 bed desorption efficiencies are limited by the upper temperature of hot nitrogen supply. To increase end-of-life desorption efficiency, the Gen1 bed design was modified, and a Thermal Enhancement Cartridge Heater Modified (TECH Mod) bed was developed. Internal electric cartridge heaters in the new design to improve end-of-life desorption, and also permit in-bed tritium accountability (IBA) calibration measurements to be made without the use of process tritium. Additional enhancements implemented into the TECH Mod design are also discussed. (authors)

  18. Progress on MOD/RABiTS{sup TM} 2G HTS wire

    Energy Technology Data Exchange (ETDEWEB)

    Rupich, M.W.; Zhang, W.; Li, X.; Kodenkandath, T.; Verebelyi, D.T.; Schoop, U.; Thieme, C.; Teplitsky, M.; Lynch, J.; Nguyen, N.; Siegal, E.; Scudiere, J.; Maroni, V.; Venkataraman, K.; Miller, D.; Holesinger, T.G

    2004-10-01

    The development of the second generation (2G) high temperature superconducting wire has advanced beyond initial laboratory demonstrations and is now focused on developing and testing high critical current conductor designs required for commercial applications. The approach pursued at American Superconductor for 2G wire manufacturing is based on the combination of the RABiTS{sup TM} substrate-buffer technology with metal organic deposition (MOD) of the YBCO layer. This MOD/RABiTS{sup TM} approach has been demonstrated in 10 m lengths with critical currents of up to 184 A/cm-width ({approx}2.3 MA/cm{sup 2}) and in short length with critical currents of up to 270 A/cm-width ({approx}3.4 MA/cm{sup 2}). In addition to a high critical current, the superconducting wire must also meet stringent mechanical and electrical stability requirements that vary by application. Commercially viable architectures designed to meet these specifications have been fabricated and tested. Wires manufactured by this process have been successfully tested in prototype cable and coil applications.

  19. RELAP5/MOD3 analysis of a heated channel in downflow

    International Nuclear Information System (INIS)

    Dimenna, R.A.; Qureshi, Z.H.; Boman, A.L.

    1993-01-01

    The onset of flow instability (OFI) is a significant phenomenon affecting the determination of a safe operating power limit in the Savannah River Site production reactors. Tests performed at Columbia University for a single tube with uniform axial and azimuthal heating have been analyzed with RELAP5/NPR, Version 0, a version of RELAP5/MOD3. The tests include water flow rates from 3.2 x l0 -4 - 2.l x 10 -3 m 3 /s (5 - 33 gpm), Reynolds numbers from 30,000 - 400,000, and surface heat fluxes from 0 - 3.2 x l0 6 w/m 2 (0 - 1,000,000 Btu/hr- ft 2 ). Pressure drop versus flow rate curves were mapped for both fixed pressure boundary conditions and fixed flow boundary conditions. RELAP5/MOD3 results showed fair agreement with data for both types of boundary conditions, and good internal consistency between calculations using the two different types of boundary conditions. Under single-phase unheated conditions, the code overpredicted the pressure drop by 22 - 34%. Under single-phase heated conditions, the overprediction increased to as much as 55%. For those tests where two-phase conditions were observed at the channel exit, RELAP5 predicted lower flows than seen in the tests before voiding occurred

  20. Moderate Resolution Imaging Spectroradiometer (MODIS) MOD21 Land Surface Temperature and Emissivity Algorithm Theoretical Basis Document

    Science.gov (United States)

    Hulley, G.; Malakar, N.; Hughes, T.; Islam, T.; Hook, S.

    2016-01-01

    This document outlines the theory and methodology for generating the Moderate Resolution Imaging Spectroradiometer (MODIS) Level-2 daily daytime and nighttime 1-km land surface temperature (LST) and emissivity product using the Temperature Emissivity Separation (TES) algorithm. The MODIS-TES (MOD21_L2) product, will include the LST and emissivity for three MODIS thermal infrared (TIR) bands 29, 31, and 32, and will be generated for data from the NASA-EOS AM and PM platforms. This is version 1.0 of the ATBD and the goal is maintain a 'living' version of this document with changes made when necessary. The current standard baseline MODIS LST products (MOD11*) are derived from the generalized split-window (SW) algorithm (Wan and Dozier 1996), which produces a 1-km LST product and two classification-based emissivities for bands 31 and 32; and a physics-based day/night algorithm (Wan and Li 1997), which produces a 5-km (C4) and 6-km (C5) LST product and emissivity for seven MODIS bands: 20, 22, 23, 29, 31-33.

  1. A comparison of the RELAP5/MOD3 code with the IIST natural circulation experiments

    International Nuclear Information System (INIS)

    Ferng, Y.M.; Lee, C.H.

    1995-01-01

    A series of experiments dealing with variable secondary-side cooling conditions have been conducted at the IIST facility, including the natural circulation experiments under the secondary-side conditions of normal feedwater, loss of feedwater, and full of air. Different cooling conditions at the secondary side directly affect the primary-to-secondary heat transfer and then may influence the heat removal capability of natural circulation in the primary system. The corresponding analytical work is performed using the RELAP5/MOD3 code. Good agreement is reached both qualitatively and quantitatively between the experimental data and calculated results, demonstrating the satisfactory assessment of RELAP5/MOD3 code compared with the IIST natural circulation experiments. The cooling conditions at the secondary side have no significant effect on the heat removal capability of natural circulation as long as sufficient coolant exists on the steam generator secondary side, based on current IIST data and analytical results. Continuous increase of the core temperature and system pressure is also demonstrated experimentally and analytically in the test with the secondary side dry for the sake of deficient heat transfer capability at the steam generator secondary system

  2. Design and operation of the RFX-mod plasma shape control system

    Energy Technology Data Exchange (ETDEWEB)

    Marchiori, G., E-mail: giuseppe.marchiori@igi.cnr.it [Consorzio RFX, Corso Stati Uniti 4, 35127 Padova (Italy); Finotti, C. [Consorzio RFX, Corso Stati Uniti 4, 35127 Padova (Italy); Kudlacek, O. [Università di Padova, Padova (Italy); Villone, F. [Dipartimento di Ingegneria Elettrica e dell’Informazione (DIEI), Università di Cassino (Italy); Zanca, P. [Consorzio RFX, Corso Stati Uniti 4, 35127 Padova (Italy); Abate, D. [Dipartimento di Ingegneria Elettrica e dell’Informazione (DIEI), Università di Cassino (Italy); Cavazzana, R. [Consorzio RFX, Corso Stati Uniti 4, 35127 Padova (Italy); Jackson, G.L.; Luce, T.C. [General Atomics, San Diego, CA (United States); Marrelli, L. [Consorzio RFX, Corso Stati Uniti 4, 35127 Padova (Italy)

    2016-10-15

    Highlights: • Linearized plasma response model of RFX-mod Tokamak Double/Single Null discharges. • Model based design of a vertical stability control system. • Model based design of a plasma shape LQG control system with Kalman state estimator. • Real time plasma boundary reconstruction algorithm. • Tracking and disturbance rejection experimental tests. - Abstract: The aim of executing Single Null discharges in RFX-mod operating as a Tokamak led to the design and implementation of a plasma shape feedback control system. A fully model-based approach was followed which allowed dealing with critical issues such as the presence of a conducting shell, the strong coupling of the poloidal field coils and the voltage limits of the power supplies. A Linear Quadratic regulator and a Kalman state estimator were designed and implemented in the real time MARTe framework together with an algorithm for the real-time plasma boundary reconstruction. The problem of a number of sensors along the poloidal direction adequate only for circular discharges was also successfully tackled. The development of the system and its performances in terms of tracking and disturbance rejection capability are presented in the paper.

  3. After the bomb drops: a new look at radiation-induced multiple organ dysfunction syndrome (MODS).

    Science.gov (United States)

    Williams, Jacqueline P; McBride, William H

    2011-08-01

    There is increasing concern that, since the Cold War era, there has been little progress regarding the availability of medical countermeasures in the event of either a radiological or nuclear incident. Fortunately, since much is known about the acute consequences that are likely to be experienced by an exposed population, the probability of survival from the immediate hematological crises after total body irradiation (TBI) has improved in recent years. Therefore focus has begun to shift towards later down-stream effects, seen in such organs as the gastrointestinal tract (GI), skin, and lung. However, the mechanisms underlying therapy-related normal tissue late effects, resulting from localised irradiation, have remained somewhat elusive and even less is known about the development of the delayed syndrome seen in the context of whole body exposures, when it is likely that systemic perturbations may alter tissue microenvironments and homeostasis. The sequence of organ failures observed after near-lethal TBI doses are similar in many ways to that of multiple organ dysfunction syndrome (MODS), leading to multiple organ failure (MOF). In this review, we compare the mechanistic pathways that underlie both MODS and delayed normal tissue effects since these may impact on strategies to identify radiation countermeasures.

  4. An assessment of the CORCON-MOD3 code. Part 1: Thermal-hydraulic calculations

    International Nuclear Information System (INIS)

    Strizhov, V.; Kanukova, V.; Vinogradova, T.; Askenov, E.; Nikulshin, V.

    1996-09-01

    This report deals with the subject of CORCON-Mod3 code validation (thermal-hydraulic modeling capability only) based on MCCI (molten core concrete interaction) experiments conducted under different programs in the past decade. Thermal-hydraulic calculations (i.e., concrete ablation, melt temperature, melt energy, concrete temperature, and condensible and non-condensible gas generation) were performed with the code, and compared with the data from 15 experiments, conducted at different scales using both simulant (metallic and oxidic) and prototypic melt materials, using different concrete types, and with and without an overlying water pool. Sensitivity studies were performed in a few cases involving, for example, heat transfer from melt to concrete, condensed phase chemistry, etc. Further, special analysis was performed using the ACE L8 experimental data to illustrate the differences between the experimental and the reactor conditions, and to demonstrate that with proper corrections made to the code, the calculated results were in better agreement with the experimental data. Generally, in the case of dry cavity and metallic melts, CORCON-Mod3 thermal-hydraulic calculations were in good agreement with the test data. For oxidic melts in a dry cavity, uncertainties in heat transfer models played an important role for two melt configurations--a stratified geometry with segregated metal and oxide layers, and a heterogeneous mixture. Some discrepancies in the gas release data were noted in a few cases

  5. Validation of CATHENA MOD-3.5/Rev0 for single-phase water hammer

    International Nuclear Information System (INIS)

    Beuthe, T.G.

    2000-01-01

    This paper describes work performed to validate the system thermalhydraulics code CATHENA MOD-3.5c/Rev0 for single-phase water hammer. Simulations were performed and are compared quantitatively against numerical tests and experimental results from the Seven Sisters Water Hammer Facility to demonstrate CATHENA can predict the creation and propagation of pressure waves when valves are opened and closed. Simulations were also performed to show CATHENA can model the behaviour of reflected and transmitted pressure waves at area changes, dead ends, tanks, boundary conditions, and orifices in simple and more complex piping systems. The CATHENA results are shown to calculate pressure and wave propagation speeds to within 0.2% and 0.5% respectively for numerical tests and within 3.3% and 5% for experimental results respectively. These results are used to help validate CATHENA for use in single-phase water hammer analysis. They also provide assurance that the fundamental parameters needed to successfully model more complex forms of water hammer are accounted for in the MOD-3.5c/Rev0 version of CATHENA, and represent the first step in the process to validate the code for use in modelling two-phase water hammer and condensation-induced water hammer. (author)

  6. Particle size distribution of dust collected from Alcator C-MOD

    International Nuclear Information System (INIS)

    Gorman, S.V.; Carmack, W.J.; Hembree, P.B.

    1998-01-01

    There are important safety issues associated with tokamak dust, accumulated primarily from sputtering and disruptions. The dust may contain tritium, it may be activated, chemically toxic, and chemically reactive. The purpose of this paper is to present results from analyses of particulate collected from the Alcator C-MOD tokamak located at Massachusetts Institute of Technology (MIT) in Cambridge, Massachusetts. The sample obtained from C-MOD was not originally intended for examination outside of MIT. The sample was collected with the intent of performing only a composition analysis. However, MIT provided the INEEL with this sample for particle analysis. The sample was collected by vacuuming a section of the machine (covering approximately 1/3 of the machine surface) with a coarse fiber filter as the collection surface. The sample was then analyzed using an optical microscope, SEM microscope, Microtrac FRA particle size analyzer. The data fit a log-normal distribution. The count median diameter (CMD) of the samples ranged from 0.3 microm to 1.1 microm with geometric standard deviations (GSD) ranging from 2.8 to 5.2 and a mass median diameter (MMD) ranging from 7.22 to 176 microm

  7. THERMAL ENHANCEMENT CARTRIDGE HEATER MODIFIED TECH MOD TRITIUM HYDRIDE BED DEVELOPMENT PART I DESIGN AND FABRICATION

    Energy Technology Data Exchange (ETDEWEB)

    Klein, J.; Estochen, E.

    2014-03-06

    The Savannah River Site (SRS) tritium facilities have used 1{sup st} generation (Gen1) LaNi{sub 4.25}Al{sub 0.75} (LANA0.75) metal hydride storage beds for tritium absorption, storage, and desorption. The Gen1 design utilizes hot and cold nitrogen supplies to thermally cycle these beds. Second and 3{sup rd} generation (Gen2 and Gen3) storage bed designs include heat conducting foam and divider plates to spatially fix the hydride within the bed. For thermal cycling, the Gen2 and Gen 3 beds utilize internal electric heaters and glovebox atmosphere flow over the bed inside the bed external jacket for cooling. The currently installed Gen1 beds require replacement due to tritium aging effects on the LANA0.75 material, and cannot be replaced with Gen2 or Gen3 beds due to different designs of these beds. At the end of service life, Gen1 bed desorption efficiencies are limited by the upper temperature of hot nitrogen supply. To increase end-of-life desorption efficiency, the Gen1 bed design was modified, and a Thermal Enhancement Cartridge Heater Modified (TECH Mod) bed was developed. Internal electric cartridge heaters in the new design to improve end-of-life desorption, and also permit in-bed tritium accountability (IBA) calibration measurements to be made without the use of process tritium. Additional enhancements implemented into the TECH Mod design are also discussed.

  8. Core heatup prediction during SB LOCA with RELAP5/MOD3.2.2 Gamma

    International Nuclear Information System (INIS)

    Parzer, I.; Mavko, B.; Petelin, S.

    2001-01-01

    The paper focuses on the phenomena leading to core uncovering and heatup during the SB LOCA and the ability of RELAP5/MOD3.2.2 Gamma to predict core overheating. The code prediction has been compared to the three experiments, one conducted on the separate effect test facility NEPTUN in Switzerland and the other two conducted on two integral test facilities, PMK-2 in Hungary and PACTEL facility in Finland. In the case of a series of boiloff experiments performed on the NEPTUN test facility the influence of the two correlations available in MOD3.2.2 Gamma for determining interphase drag has been studied. In the case of IAEA-SPE-4 experiment simulation on PMK-2 facility the main goal of the analysis was to study the adequate modeling of the hexagonal core channel with 19-rod bundle and the phenomena during the core uncovering. The third analyzed experiment, OECD-ISP-33, was performed on PACTEL facility to study different natural circulation modes during SB LOCA. The analysis also focused on the final stage of this SB LOCA experiment, when core dryout and heatup was observed due to gradual emptying of the primary system. Following the experience the appropriate modeling options have been used to achieve better representation of the important phenomena during the SB LOCA.(author)

  9. ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

    Science.gov (United States)

    Landt, Stephen G.; Marinov, Georgi K.; Kundaje, Anshul; Kheradpour, Pouya; Pauli, Florencia; Batzoglou, Serafim; Bernstein, Bradley E.; Bickel, Peter; Brown, James B.; Cayting, Philip; Chen, Yiwen; DeSalvo, Gilberto; Epstein, Charles; Fisher-Aylor, Katherine I.; Euskirchen, Ghia; Gerstein, Mark; Gertz, Jason; Hartemink, Alexander J.; Hoffman, Michael M.; Iyer, Vishwanath R.; Jung, Youngsook L.; Karmakar, Subhradip; Kellis, Manolis; Kharchenko, Peter V.; Li, Qunhua; Liu, Tao; Liu, X. Shirley; Ma, Lijia; Milosavljevic, Aleksandar; Myers, Richard M.; Park, Peter J.; Pazin, Michael J.; Perry, Marc D.; Raha, Debasish; Reddy, Timothy E.; Rozowsky, Joel; Shoresh, Noam; Sidow, Arend; Slattery, Matthew; Stamatoyannopoulos, John A.; Tolstorukov, Michael Y.; White, Kevin P.; Xi, Simon; Farnham, Peggy J.; Lieb, Jason D.; Wold, Barbara J.; Snyder, Michael

    2012-01-01

    Chromatin immunoprecipitation (ChIP) followed by high-throughput DNA sequencing (ChIP-seq) has become a valuable and widely used approach for mapping the genomic location of transcription-factor binding and histone modifications in living cells. Despite its widespread use, there are considerable differences in how these experiments are conducted, how the results are scored and evaluated for quality, and how the data and metadata are archived for public use. These practices affect the quality and utility of any global ChIP experiment. Through our experience in performing ChIP-seq experiments, the ENCODE and modENCODE consortia have developed a set of working standards and guidelines for ChIP experiments that are updated routinely. The current guidelines address antibody validation, experimental replication, sequencing depth, data and metadata reporting, and data quality assessment. We discuss how ChIP quality, assessed in these ways, affects different uses of ChIP-seq data. All data sets used in the analysis have been deposited for public viewing and downloading at the ENCODE (http://encodeproject.org/ENCODE/) and modENCODE (http://www.modencode.org/) portals. PMID:22955991

  10. Inherited susceptibility and radiation exposure

    International Nuclear Information System (INIS)

    Little, J.B.

    1997-01-01

    There is continuing concern that some people in the general population may have genetic makeups that place them at particularly high risk for radiation-induced cancer. The existence of such a susceptible subpopulation would have obvious implications for the estimation of risks of radiation exposure. Although it has been long known that familial aggregations of cancer do sometimes occur, recent evidence suggests that a general genetic predisposition to cancer does not exist; most cancers occur sporadically. On the other hand, nearly 10% of the known Mendelian genetic disorders are associated with cancer. A number of these involve a familial predisposition to cancer, and some are characterized by an enhanced susceptibility to the induction of cancer by various physical and chemical carcinogens, including ionizing radiation. Such increased susceptibility will depend on several factors including the frequency of the susceptibility gene in the population and its penetrance, the strength of the predisposition, and the degree to which the cancer incidence in susceptible individuals may be increased by the carcinogen. It is now known that these cancer-predisposing genes may be responsible not only for rare familial cancer syndromes, but also for a proportion of the common cancers. Although the currently known disorders can account for only a small fraction of all cancers, they serve as models for genetic predisposition to carcinogen-induced cancer in the general population. In the present report, the author describes current knowledge of those specific disorders that are associated with an enhanced predisposition to radiation-induced cancer, and discusses how this knowledge may bear on the susceptibility to radiation-induced cancer in the general population and estimates of the risk of radiation exposure

  11. pitting corrosion susceptibility pitting corrosion susceptibility of aisi ...

    African Journals Online (AJOL)

    eobe

    The susceptibility of austenitic (AISI 301) stainless steel to pitting corrosion was evaluated in sodium chloride ... halides, the most aggressive and thus, the most frequently investigated is the chloride ions, particularly its effect on pit formation in 18/8 stainless steel [1 - 3]. ... in sea water), and moderately high temperatures.

  12. Analyse de sensibilité pour l'étude des paramètres influents dans les modèles d'interface pneu/sol

    OpenAIRE

    Kiébré, Rimyaledgo; Anstett-Collin, Floriane; Basset, Michel

    2010-01-01

    International audience; Le but du papier est d'étudier les paramètres influents de deux modèles de l'interface pneu/sol, le modèle de Fiala et le modèle de Pacejka, utilisés dans les domaines automobile et aéronautique. Il s'agit de modèles non linéaires, dépendant de paramètres inconnus, à estimer. Afin de fixer au mieux le plan d'expériences, il convient de déterminer les paramètres responsables de l'incertitude sur la sortie du modèle. Pour cela, une analyse de sensibilité globale est effe...

  13. Effect of feeding broilers diets differing in susceptible phytate content

    Directory of Open Access Journals (Sweden)

    Natalie K. Morgan

    2016-03-01

    Full Text Available Measurements of total phytate phosphorus content of diets may be deceptive as they do not indicate substrate availability for phytase; it may be that measurements of phytate susceptible to phytase effects are a more accurate measure of phosphorus (P availability to the bird. To verify this hypothesis, an experiment was conducted to compare diets formulated to contain either high or low susceptible phytate, supplemented with either 0 or 500 FTU/kg phytase. Susceptible phytate was determined by exposing the feed samples to conditions that mimicked the average pH of the proximal gastrointestinal tract (pH 4.5 and the optimum temperature for phytase activity (37 °C and then measuring phytate dissolved. Ross 308 birds (n = 240 were fed one of 4 dietary treatments in a 2 × 2 factorial design; 2 diets with high (8.54 g/kg, 57.90% of total phytate or low (5.77 g/kg, 46.33% of total phytate susceptible phytate, containing 0 or 500 FTU/kg phytase. Diets were fed to broilers (12 replicate pens of 5 birds per pen from d 0 to 28 post hatch. Birds fed diets high in susceptible phytate had greater phytate hydrolysis in the gizzard (P < 0.001, jejunum (P < 0.001 and ileum (P < 0.001 and resulting greater body weight gain (BWG (P = 0.015 and lower FCR (P = 0.003 than birds fed the low susceptible phytate diets, irrespective of phytase presence. Birds fed the high susceptible diets also had greater P solubility in the gizzard and Ca and P solubility in the jejunum and ileum (P < 0.05 and resulting greater tibia and femur Ca and P (P < 0.05 content than those fed the low susceptible diets. All the susceptible phytate was fully degraded in the tract in the absence of added phytase, suggesting the assay used in this study was able to successfully estimate the amount of total dietary phytate that was susceptible to the effects of phytase when used at standard levels. No interactions were observed between susceptible phytate and phytase on

  14. MOD_FreeSurf2D: a Surface Fluid Flow Simulation Model for Rivers, Streams, and Shallow Estuaries

    Science.gov (United States)

    Martin, N.; Gorelick, S. M.

    2003-12-01

    The MOD_FreeSurf2D, Modular Free Surface Flow in Two-Dimensions, computer model simulates free surface fluid flow in streams, rivers, and shallow estuaries under the assumptions of a well-mixed water column, a small water depth to width ratio, and a hydrostatic pressure distribution. The dependent variables in the model are free surface elevation, which provides total water depth, and fluid velocity. Primary advantages of MOD_FreeSurf2D relative to other two-dimensional models are a stable and computationally efficient numerical representation and a transparent representation of wetting and drying of the simulation domain. MOD_FreeSurf2D approximates the depth-averaged, shallow water equations with a finite volume, semi-implicit, semi-Lagrangian numerical representation similar to the TRIM method (Casulli, 1990; Casulli and Cheng, 1992; Casulli, 1999). The semi-implicit, semi-Lagrangian approach is computationally efficient because time steps can exceed the Courant-Friedrich-Lewy (CFL) stability criterion without significant accuracy degradation (Robert, 1982; Casulli, 1990). The rectangular, Arakawa C-grid, finite-volume layout allows flooding and drying in response to changing flow conditions without prior channel specification or closed boundary specification. Open boundary conditions available in MOD_FreeSurf2D are specified flux, specified total water depth, specified velocity, radiation free surface, and radiation velocity. MOD_FreeSurf2D requires initial topography, undisturbed water depth, and Manning's roughness coefficient. MOD_FreeSurf2D simulated results are shown to converge to the semi-empirical solution for a simple straight channel case. Two applications demonstrate the accuracy of MOD_FreeSurf2D. The first application is the evolution of water depth in the dambreak-style flume experiment of Bellos et al. (1992). In this case, MOD_FreeSurf2D accurately simulates the changing water depth in the flume during the experiment and models the wetting of

  15. India, Genomic diversity & Disease susceptibility

    Indian Academy of Sciences (India)

    Table of contents. India, Genomic diversity & Disease susceptibility · India, a paradise for Genetic Studies · Involved in earlier stages of Immune response protecting us from Diseases, Responsible for kidney and other transplant rejections Inherited from our parents · PowerPoint Presentation · Slide 5 · Slide 6 · Slide 7.

  16. Prion protein and scrapie susceptibility

    NARCIS (Netherlands)

    Smits, M.A.; Bossers, A.; Schreuder, B.E.C.

    1997-01-01

    This article presents briefly current views on the role of prion protein (PrP) in Transmissible Spongiform Encephalopathies or prion diseases and the effect of PrP polymoryhisms on the susceptibility to these diseases, with special emphasis on sheep scrapie. The PrP genotype of sheep apears to be a

  17. Genetic Susceptibility to Head and Neck Squamous Cell Carcinoma

    International Nuclear Information System (INIS)

    Lacko, Martin; Braakhuis, Boudewijn J.M.; Sturgis, Erich M.; Boedeker, Carsten C.; Suárez, Carlos; Rinaldo, Alessandra; Ferlito, Alfio; Takes, Robert P.

    2014-01-01

    Head-and-neck squamous cell carcinoma (HNSCC) is the sixth most common cancer worldwide, and its incidence is growing. Although environmental carcinogens and carcinogenic viruses are the main etiologic factors, genetic predisposition obviously plays a risk-modulating role, given that not all individuals exposed to these carcinogens experience the disease. This review highlights some aspects of genetic susceptibility to HNSCC: among others, genetic polymorphisms in biotransformation enzymes, DNA repair pathway, apoptotic pathway, human papillomavirus-related pathways, mitochondrial polymorphisms, and polymorphism related to the bilirubin-metabolized pathway. Furthermore, epigenetic variations, familial forms of HNSCC, functional assays for HNSCC risk assessment, and the implications and perspectives of research on genetic susceptibility in HNSCC are discussed

  18. Genetic Susceptibility to Head and Neck Squamous Cell Carcinoma

    Energy Technology Data Exchange (ETDEWEB)

    Lacko, Martin [Department of Otorhinolaryngology—Head and Neck Surgery, Maastricht University Medical Center, Maastricht (Netherlands); Braakhuis, Boudewijn J.M. [Department of Otolaryngology—Head and Neck Surgery, VU University Medical Center, Amsterdam (Netherlands); Sturgis, Erich M. [Department of Head and Neck Surgery and Department of Epidemiology, The University of Texas MD Anderson Cancer Center, Houston, Texas (United States); Boedeker, Carsten C. [Department of Otorhinolaryngology—Head and Neck Surgery, Albert-Ludwigs-University, Freiburg, Germany and Department of Otorhinolaryngology - Head and Neck Surgery, HELIOS Hanseklinikum Stralsund, Stralsund (Germany); Suárez, Carlos [Department of Otolaryngology, Hospital Universitario Central de Asturias, Oviedo (Spain); Instituto Universitario de Oncología del Principado de Asturias, Oviedo (Spain); Rinaldo, Alessandra; Ferlito, Alfio [ENT Clinic, University of Udine, Udine (Italy); Takes, Robert P., E-mail: robert.takes@radboudumc.nl [Department of Otolaryngology—Head and Neck Surgery, Radboud University Nijmegen Medical Center, Nijmegen (Netherlands)

    2014-05-01

    Head-and-neck squamous cell carcinoma (HNSCC) is the sixth most common cancer worldwide, and its incidence is growing. Although environmental carcinogens and carcinogenic viruses are the main etiologic factors, genetic predisposition obviously plays a risk-modulating role, given that not all individuals exposed to these carcinogens experience the disease. This review highlights some aspects of genetic susceptibility to HNSCC: among others, genetic polymorphisms in biotransformation enzymes, DNA repair pathway, apoptotic pathway, human papillomavirus-related pathways, mitochondrial polymorphisms, and polymorphism related to the bilirubin-metabolized pathway. Furthermore, epigenetic variations, familial forms of HNSCC, functional assays for HNSCC risk assessment, and the implications and perspectives of research on genetic susceptibility in HNSCC are discussed.

  19. Calculation of design load for the MOD-5A 7.3 mW wind turbine system

    Science.gov (United States)

    Mirandy, L.; Strain, J. C.

    1995-01-01

    Design loads are presented for the General Electric MOD-SA wind turbine. The MOD-SA system consists of a 400 ft. diameter, upwind, two-bladed, teetered rotor connected to a 7.3 mW variable-speed generator. Fatigue loads are specified in the form of histograms for the 30 year life of the machine, while limit (or maximum) loads have been derived from transient dynamic analysis at critical operating conditions. Loads prediction was accomplished using state of the art aeroelastic analyses developed at General Electric. Features of the primary predictive tool - the Transient Rotor Analysis Code (TRAC) are described in the paper. Key to the load predictions are the following wind models: (1) yearly mean wind distribution; (2) mean wind variations during operation; (3) number of start/shutdown cycles; (4) spatially large gusts; and (5) spatially small gusts (local turbulence). The methods used to develop statistical distributions from load calculations represent an extension of procedures used in past wind programs and are believed to be a significant contribution to Wind Turbine Generator analysis. Test/theory correlations are presented to demonstrate code load predictive capability and to support the wind models used in the analysis. In addition MOD-5A loads are compared with those of existing machines. The MOD-5A design was performed by the General Electric Company, Advanced Energy Program Department, under Contract DEN3-153 with NASA Lewis Research Center and sponsored by the Department of Energy.

  20. Blade design and operating experience on the MOD-OA 200 kW wind turbine at Clayton, New Mexico

    Science.gov (United States)

    Linscott, B. S.; Shaltens, R. K.

    1979-01-01

    Two 60 foot long aluminum wind turbine blades were operated for over 3000 hours on the MOD-OA wind turbine. The first signs of blade structural damage were observed after 400 hours of operation. Details of the blade design, loads, cost, structural damage, and repair are discussed.

  1. La modélisation mathématique éclaire les politiques de prévention ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    27 avr. 2016 ... Un projet de recherche financé par le CRDI utilise la modélisation mathématique pour influer sur les politiques locales et nationales de réduction de la transmission du VIH en Chine.

  2. BioJava-ModFinder: identification of protein modifications in 3D structures from the Protein Data Bank.

    Science.gov (United States)

    Gao, Jianjiong; Prlic, Andreas; Bi, Chunxiao; Bluhm, Wolfgang F; Dimitropoulos, Dimitris; Xu, Dong; Bourne, Philip E; Rose, Peter W

    2017-07-01

    We developed a new software tool, BioJava-ModFinder, for identifying protein modifications observed in 3D structures archived in the Protein Data Bank (PDB). Information on more than 400 types of protein modifications were collected and curated from annotations in PDB, RESID, and PSI-MOD. We divided these modifications into three categories: modified residues, attachment modifications, and cross-links. We have developed a systematic method to identify these modifications in 3D protein structures. We have integrated this package with the RCSB PDB web application and added protein modification annotations to the sequence diagram and structure display. By scanning all 3D structures in the PDB using BioJava-ModFinder, we identified more than 30 000 structures with protein modifications, which can be searched, browsed, and visualized on the RCSB PDB website. BioJava-ModFinder is available as open source (LGPL license) at ( https://github.com/biojava/biojava/tree/master/biojava-modfinder ). The RCSB PDB can be accessed at http://www.rcsb.org . pwrose@ucsd.edu. © The Author 2017. Published by Oxford University Press.

  3. Transient analysis of rod drop accident for third fuel cycle for Angra-1 reactor using SACI2/MOD0

    International Nuclear Information System (INIS)

    Atayde, P.A. de.

    1989-01-01

    The rod drop accident for 3 0 fuel cycle of Angra-1 reactor is analysed, evaluating de position effect of detectors on the measurement of reactor power. The transient calculation was done using SAC12/MOD0 code for thermo-hydraulic analysis of reactor core, aiming to evaluate safe conditions during the accident. (M.C.K.)

  4. Validation of global evapotranspiration product (MOD16) using flux tower data in the African savanna, South Africa

    CSIR Research Space (South Africa)

    Ramoelo, Abel

    2014-08-01

    Full Text Available been developed. However, its accuracy is not known in South African ecosystems. The objective of this study was to validate the MOD16 ET product using data from two eddy covariance flux towers, namely; Skukuza and Malopeni installed in a savanna...

  5. Susceptible-infected-recovered and susceptible-exposed-infected models

    Energy Technology Data Exchange (ETDEWEB)

    Tome, Tania; De Oliveira, Mario J, E-mail: oliveira@if.usp.br [Instituto de Fisica, Universidade de Sao Paulo, Caixa Postal 66318, 05315-970 Sao Paulo, Sao Paulo (Brazil)

    2011-03-04

    Two stochastic epidemic lattice models, the susceptible-infected-recovered and the susceptible-exposed-infected models, are studied on a Cayley tree of coordination number k. The spreading of the disease in the former is found to occur when the infection probability b is larger than b{sub c} = k/2(k - 1). In the latter, which is equivalent to a dynamic site percolation model, the spreading occurs when the infection probability p is greater than p{sub c} = 1/(k - 1). We set up and solve the time evolution equations for both models and determine the final and time-dependent properties, including the epidemic curve. We show that the two models are closely related by revealing that their relevant properties are exactly mapped into each other when p = b/[k - (k - 1)b]. These include the cluster size distribution and the density of individuals of each type, quantities that have been determined in closed forms.

  6. Host Phenology and Leaf Effects on Susceptibility of California Bay Laurel to Phytophthora ramorum.

    Science.gov (United States)

    Johnston, Steven F; Cohen, Michael F; Torok, Tamas; Meentemeyer, Ross K; Rank, Nathan E

    2016-01-01

    Spread of the plant pathogen Phytophthora ramorum, causal agent of the forest disease sudden oak death, is driven by a few competent hosts that support spore production from foliar lesions. The relationship between traits of a principal foliar host, California bay laurel (Umbellularia californica), and susceptibility to P. ramorum infection were investigated with multiple P. ramorum isolates and leaves collected from multiple trees in leaf-droplet assays. We examined whether susceptibility varies with season, leaf age, or inoculum position. Bay laurel susceptibility was highest during spring and summer and lowest in winter. Older leaves (>1 year) were more susceptible than younger ones (8 to 11 months). Susceptibility was greater at leaf tips and edges than the middle of the leaf. Leaf surfaces wiped with 70% ethanol were more susceptible to P. ramorum infection than untreated leaf surfaces. Our results indicate that seasonal changes in susceptibility of U. californica significantly influence P. ramorum infection levels. Thus, in addition to environmental variables such as temperature and moisture, variability in host plant susceptibility contributes to disease establishment of P. ramorum.

  7. Susceptibility Testing of Malassezia Species Using the Urea Broth Microdilution Method

    Science.gov (United States)

    Nakamura, Yuka; Kano, Rui; Murai, Tae; Watanabe, Shinichi; Hasegawa, Atsuhiko

    2000-01-01

    A urea broth microdilution method to assay the susceptibilities of seven Malassezia species was developed. This method indicated the same sensitivities as the agar plate dilution method for isolates of Malassezia furfur, M. pachydermatis, M. slooffiae, and M. sympodialis. PMID:10898698

  8. Alignment of new tuberculosis drug regimens and drug susceptibility testing: a framework for action

    NARCIS (Netherlands)

    Wells, William A.; Boehme, Catharina C.; Cobelens, Frank G. J.; Daniels, Colleen; Dowdy, David; Gardiner, Elizabeth; Gheuens, Jan; Kim, Peter; Kimerling, Michael E.; Kreiswirth, Barry; Lienhardt, Christian; Mdluli, Khisi; Pai, Madhukar; Perkins, Mark D.; Peter, Trevor; Zignol, Matteo; Zumla, Alimuddin; Schito, Marco

    2013-01-01

    New tuberculosis drug regimens are creating new priorities for drug susceptibility testing (DST) and surveillance. To minimise turnaround time, rapid DST will need to be prioritised, but developers of these assays will need better data about the molecular mechanisms of resistance. Efforts are

  9. Analyse géographique et modélisation des dynamiques d’urbanisation à La Réunion

    Directory of Open Access Journals (Sweden)

    Pascal Thinon

    2007-07-01

    Full Text Available Cet article propose un prototype de modèle d’interprétation des dynamiques urbaines sur l’Ile de la Réunion. En entrée, le modèle combine un ensemble de champs géographiques jouant en faveur ou en défaveur de l’urbanisation ; en sortie, il indique une propension à l’urbanisation de chaque lieu. Il est conçu de manière à permettre une analyse exploratoire de ces dynamiques selon une approche heuristique. Les premiers résultats ont permis d’obtenir, sur l’ensemble de l’île, une carte de la propension à l’urbanisation, jugée satisfaisante eu égard aux dynamiques observées entre 1989 et 2002 ; un premier scénario d’évolution, concernant les espaces de savanes à l’ouest de l’île, est également proposé. Les premiers travaux sur ce modèle, encore à un stade préliminaire, sont encourageants mais soulèvent de nombreuses questions concernant notamment le calibrage des facteurs et leur rôle respectif, l’intégration de nouveaux champs comme le voisinage, l’analyse des résidus, la mesure de la qualité du modèle ou bien encore la mobilisation de ce type de modèle comme outil d’accompagnement de projets de territoires.

  10. Structural analysis of wind turbine rotors for NSF-NASA Mod-0 wind power system

    Science.gov (United States)

    Spera, D. A.

    1976-01-01

    Preliminary estimates are presented of vibratory loads and stresses in hingeless and teetering rotors for the proposed NSF-NASA Mod-0 wind power system. Preliminary blade design utilizes a tapered tubular aluminum spar which supports nonstructural aluminum ribs and skin and is joined to the rotor hub by a steel shank tube. Stresses in the shank of the blade are calculated for static, rated, and overload operating conditions. Blade vibrations were limited to the fundamental flapping modes, which were elastic cantilever bending for hingeless rotor blades and rigid-body rotation for teetering rotor blades. The MOSTAB-C computer code was used to calculate aerodynamic and mechanical loads. The teetering rotor has substantial advantages over the hingeless rotor with respect to shank stresses, fatigue life, and tower loading. The hingeless rotor analyzed does not appear to be structurally stable during overloads.

  11. Kort og klart: Vold og seksuelle overgreb mod børn og unge med handicap

    DEFF Research Database (Denmark)

    Holt, Helle; Jørgensen, Trine

    2017-01-01

    Hvor mange børn og unge med handicap udsættes for vold og seksuelle overgreb? Hvilke forhold i børnenes liv gør dem særligt udsatte for overgreb? Og hvilke dilemmaer og udfordringer oplever de fagfolk, der er tæt på børnene, når det gælder mistanke, opsporing og handling omkring overgreb? Det er...... fokus for dette hæfte. Hæftet bygger på undersøgelsen, "Vold og seksuelle overgreb mod børn og unge med handicap", som SFI har udført for Socialstyrelsen. Formålet med undersøgelsen er at styrke fagfolks viden om området og på den måde skabe det bedst mulige grundlag for at forebygge og opspore overgreb....

  12. DANDY AND FLÂNEUR: MODES OF SUBJECTIVATION FROM MODERNITY AND THE ENGLISH MODS

    Directory of Open Access Journals (Sweden)

    Mateus Pranzetti Paul Gruda

    2017-12-01

    Full Text Available The social organisation within large cities is pointed out as the principal cause of the creation of the Modernity subject, who is mainly individualistic and privatised. Life amid the rising urban chaos and the crowds gathered made possible to assert about some consequent modes of subjectivation that emerged in those configurations and social-historical and cultural contexts. The poet Charles Baudelaire is named as an important character for understanding the Modernity, since he translated the sensations of city dweller and assumed different roles to face this urban life. From some considerations related to Modern city, I seek to enlist modes of subjectivation of Modernity (materialised and expressed within the dandy and the flâneur figures, firstly presenting some main features of them to afterwards relate those subjectivation modes with the update, assumption and distortion forms proceed by the members of a British popular youth subculture originated around the second part of 20th century: the Mods.

  13. Solubility of fragrance raw materials in water: Experimental study, correlations, and Mod. UNIFAC (Do) predictions

    Energy Technology Data Exchange (ETDEWEB)

    Domanska, Urszula, E-mail: ula@ch.pw.edu.p [Department of Physical Chemistry, Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664 Warsaw (Poland); Paduszynski, Kamil; Niszczota, Zaneta K. [Department of Physical Chemistry, Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664 Warsaw (Poland)

    2011-01-15

    The (liquid + liquid) and (solid + liquid) phase equilibria of nine binary mixtures containing fragrance raw materials (FRM) such as aliphatic ketones and compounds based on cyclohexane with water were investigated. The systems {l_brace}2-heptanone, or 2-nonanone, or 2-undecanone, or 2-tridecanone, or cyclohexyl carboxylic acid (CCA), or cyclohexyl acetic acid (CAA), or 2-cyclohexyl ethanol (2CE) or cyclohexyl acetate (CA), or 2-cyclohexyl ethyl acetate (2CEA) + water (2){r_brace} have been measured by a dynamic method in wide range of temperatures from (290 to 360) K and ambient pressure. For all systems immiscibility in the liquid phase was detected. The experimental data was correlated by means of the NRTL equation, utilizing parameters derived from the (liquid + liquid) equilibrium. Additionally, the binary mixtures were predicted with the Mod. UNIFAC (Do) model, with known from literature parameters, with very good results.

  14. Solubility of fragrance raw materials in water: Experimental study, correlations, and Mod. UNIFAC (Do) predictions

    International Nuclear Information System (INIS)

    Domanska, Urszula; Paduszynski, Kamil; Niszczota, Zaneta K.

    2011-01-01

    The (liquid + liquid) and (solid + liquid) phase equilibria of nine binary mixtures containing fragrance raw materials (FRM) such as aliphatic ketones and compounds based on cyclohexane with water were investigated. The systems {2-heptanone, or 2-nonanone, or 2-undecanone, or 2-tridecanone, or cyclohexyl carboxylic acid (CCA), or cyclohexyl acetic acid (CAA), or 2-cyclohexyl ethanol (2CE) or cyclohexyl acetate (CA), or 2-cyclohexyl ethyl acetate (2CEA) + water (2)} have been measured by a dynamic method in wide range of temperatures from (290 to 360) K and ambient pressure. For all systems immiscibility in the liquid phase was detected. The experimental data was correlated by means of the NRTL equation, utilizing parameters derived from the (liquid + liquid) equilibrium. Additionally, the binary mixtures were predicted with the Mod. UNIFAC (Do) model, with known from literature parameters, with very good results.

  15. Interactive graphical analyzer based on RELAP5/MOD3.2-NPA

    International Nuclear Information System (INIS)

    Posada, J.M.; Martin, M.; Reventos, F.; Llopis, C.

    1999-01-01

    The work presented in this paper consists on the development of a Graphical Interactive Analyzer for Asco (two units) and Vandellos (one unit) Nuclear Power Plants, all of them are three loop Westinghouse PWR with rated electrical power around 1000 Mwe. Basic steps are: Development of the thermal-hydraulic and kinetic model for RELAP5/mod3.2 corresponding to NSSS, Steam Flow paths from Steam Generators to Turbine and Condenser, Feedwater System, Emergency Core Cooling System; and related protection and control systems. Development of Graphical representation, for NPA-1.3.4., to permit the user interact with the model. Validation against experimental data. The result is an engineering tool that can help on Plant transient analysis, and on the study of modifications proposed on the components simulated; it's also a powerful tool for operator teaching. (author)

  16. Density limit and cross-field edge transport scaling in Alcator C-Mod

    International Nuclear Information System (INIS)

    LaBombard, B.; Greenwald, M.; Hughes, J.W.; Lipschultz, B.; Mossessian, D.; Terry, J.L.; Boivin, R.L.; Carreras, B.A.; Pitcher, C.S.; Zweben, S.J.

    2003-01-01

    Recent experiments in Alcator C-Mod have uncovered a direct link between the character and scaling of cross-field particle transport in the edge plasma and the density limit, n G . As n-bar e /n G is increased from low values to values approaching ∼1, an ordered progression in the cross-field edge transport physics occurs: first benign cross-field heat convection, then cross-field heat convection impacting the scrape-off layer (SOL) power loss channels and reducing the separatrix electron temperature, and finally 'bursty' transport (normally associated with the far SOL) invading into closed flux surface regions and carrying a convective power loss that impacts the power balance of the discharge. These observations suggest that SOL transport and its scaling with plasma conditions plays a key role in setting the empirically observed density limit scaling law. (author)

  17. Uncertainty quantification of RELAP5/MOD3/KAERI critical flow model using Marviken experimental data

    International Nuclear Information System (INIS)

    Lee, Sang Yong; Kwon, Tae Soon; Lee, Won Jae; Lee, Young Jin

    1994-06-01

    The uncertainty in the critical flow model of RELAP5/MOD3 is quantified by the direct comparison to the experimental data. The realistic critical flow discharge coefficients and associated uncertainties are determined for the subcooled critical flow and two-phase critical flow by assessment of nine-MARVIKEN critical flow tests(CFT). The realistic discharge coefficients are determined to be 0.89 for the subcooled critical flow and 1.07 for the two-phase critical flow, and the associated standard deviations are 0.03491 and 0.1189, respectively. The results obtained from this study can be applied to the calculation of the realistic response of LBLOCA (Large Break Loss of Coolant Accident) scenario and to evaluate the realistic ECCS (Emergency Core Cooling System) performance. (Author) 8 refs., 15 figs., 3 tabs

  18. FRBRizing an E-Library : Migrating from Dublin Core to FRBR and MODS

    Directory of Open Access Journals (Sweden)

    Jeremy Nelson

    2010-12-01

    Full Text Available Western State College in Gunnison, Colorado developed an open-source eCataloger Framework, based on Dublin Core metadata, on Google's App Engine to manage and serve electronic resources to the library's patrons. Pressed to find new solutions for failing manual workflows for serials and government document resource management, the eCataloger Framework was extended to FRBR to automate and enhance serials management and government documents receiving. Based on successfully FRBRizing the eCataloger, Western State College converted their e-Library management from Dublin Core to FRBR and MODS. This paper examines the processes of each of these implementations using Python, AJAX, and jQuery, the details of the FRBR data model, including using FRBRoo, and the successful user interface supported by a FRBRized catalog.

  19. Tungsten nano-tendril growth in the Alcator C-Mod divertor

    International Nuclear Information System (INIS)

    Wright, G.M.; Brunner, D.; Labombard, B.; Lipschultz, B.; Terry, J.L.; Whyte, D.G.; Baldwin, M.J.; Doerner, R.P.

    2012-01-01

    Growth of tungsten nano-tendrils (‘fuzz’) has been observed for the first time in the divertor region of a high-power density tokamak experiment. After 14 consecutive helium L-mode discharges in Alcator C-Mod, the tip of a tungsten Langmuir probe at the outer strike point was fully covered with a layer of nano-tendrils. The thickness of the individual nano-tendrils (50–100 nm) and the depth of the layer (600 ± 150 nm) are consistent with observations from experiments on linear plasma devices. The observation of tungsten fuzz in a tokamak may have important implications for material erosion, dust formation, divertor lifetime and tokamak operations in next-step devices. (letter)

  20. Modélisation de la solidification par la méthode d’enthalpie

    OpenAIRE

    BENAMEUR, Benamar

    2014-01-01

    La modélisation numérique du phénomène de solidification à l’échelle macroscopique a une importance considérable dans la conception virtuelle des procédés d’élaboration des matériaux. Ce phénomène de solidification est caractérisé par la formation d’une frontière mobile qui sépare les deux phases liquide et solide au cours de changement de phase, ce qui nécessite des techniques appropriées pour suivre le mouvement de front et localiser sa position. Dans ce mémoire et afin de...

  1. Modélisation de la solidification par la méthode d’enthalpie

    OpenAIRE

    BENAMEUR, Benamar

    2013-01-01

    La modélisation numérique du phénomène de solidification à l’échelle macroscopique a une importance considérable dans la conception virtuelle des procédés d’élaboration des matériaux. Ce phénomène de solidification est caractérisé par la formation d’une frontière mobile qui sépare les deux phases liquide et solide au cours de changement de phase, ce qui nécessite des techniques appropriées pour suivre le mouvement de front et localiser sa position. Dans ce mémoire et afin de...

  2. Identification of functional elements and regulatory circuits by Drosophila modENCODE.

    Science.gov (United States)

    Roy, Sushmita; Ernst, Jason; Kharchenko, Peter V; Kheradpour, Pouya; Negre, Nicolas; Eaton, Matthew L; Landolin, Jane M; Bristow, Christopher A; Ma, Lijia; Lin, Michael F; Washietl, Stefan; Arshinoff, Bradley I; Ay, Ferhat; Meyer, Patrick E; Robine, Nicolas; Washington, Nicole L; Di Stefano, Luisa; Berezikov, Eugene; Brown, Christopher D; Candeias, Rogerio; Carlson, Joseph W; Carr, Adrian; Jungreis, Irwin; Marbach, Daniel; Sealfon, Rachel; Tolstorukov, Michael Y; Will, Sebastian; Alekseyenko, Artyom A; Artieri, Carlo; Booth, Benjamin W; Brooks, Angela N; Dai, Qi; Davis, Carrie A; Duff, Michael O; Feng, Xin; Gorchakov, Andrey A; Gu, Tingting; Henikoff, Jorja G; Kapranov, Philipp; Li, Renhua; MacAlpine, Heather K; Malone, John; Minoda, Aki; Nordman, Jared; Okamura, Katsutomo; Perry, Marc; Powell, Sara K; Riddle, Nicole C; Sakai, Akiko; Samsonova, Anastasia; Sandler, Jeremy E; Schwartz, Yuri B; Sher, Noa; Spokony, Rebecca; Sturgill, David; van Baren, Marijke; Wan, Kenneth H; Yang, Li; Yu, Charles; Feingold, Elise; Good, Peter; Guyer, Mark; Lowdon, Rebecca; Ahmad, Kami; Andrews, Justen; Berger, Bonnie; Brenner, Steven E; Brent, Michael R; Cherbas, Lucy; Elgin, Sarah C R; Gingeras, Thomas R; Grossman, Robert; Hoskins, Roger A; Kaufman, Thomas C; Kent, William; Kuroda, Mitzi I; Orr-Weaver, Terry; Perrimon, Norbert; Pirrotta, Vincenzo; Posakony, James W; Ren, Bing; Russell, Steven; Cherbas, Peter; Graveley, Brenton R; Lewis, Suzanna; Micklem, Gos; Oliver, Brian; Park, Peter J; Celniker, Susan E; Henikoff, Steven; Karpen, Gary H; Lai, Eric C; MacAlpine, David M; Stein, Lincoln D; White, Kevin P; Kellis, Manolis

    2010-12-24

    To gain insight into how genomic information is translated into cellular and developmental programs, the Drosophila model organism Encyclopedia of DNA Elements (modENCODE) project is comprehensively mapping transcripts, histone modifications, chromosomal proteins, transcription factors, replication proteins and intermediates, and nucleosome properties across a developmental time course and in multiple cell lines. We have generated more than 700 data sets and discovered protein-coding, noncoding, RNA regulatory, replication, and chromatin elements, more than tripling the annotated portion of the Drosophila genome. Correlated activity patterns of these elements reveal a functional regulatory network, which predicts putative new functions for genes, reveals stage- and tissue-specific regulators, and enables gene-expression prediction. Our results provide a foundation for directed experimental and computational studies in Drosophila and related species and also a model for systematic data integration toward comprehensive genomic and functional annotation.

  3. Modélisation système de la thérapie photodynamique

    OpenAIRE

    Bastogne, Thierry; Tirand, Loraine; Barberi-Heyob, Muriel; Richard, Alain

    2006-01-01

    National audience; Cet article traite de la modélisation système de la thérapie photodynamique (PDT), un mode de traitement émergeant des cancers. On y montre que la PDT est un système dynamique multivarié et que sa mise en oeuvre correspond à un problème de commande. Plus précisément, cet article présente le problème de la dosimétrie implicite, c'est-à-dire l'adaptation en temps réel de la dose de lumière d'excitation en fonction de la dose estimée d'oxygène singulet produite, comme un probl...

  4. Modélisation système de la thérapie photodynamique

    OpenAIRE

    Bastogne, Thierry; Tirand, Loraine; Dobre, Simona; Barberi-Heyob, Muriel; Richard, Alain

    2006-01-01

    Spécial CIFA 2006 N°1; National audience; Cet article traite de la modélisation système de la thérapie photodynamique (PDT), un mode de traitement émergeant des cancers. On y montre que la PDT est un système dynamique multivarié et que sa mise en oeuvre correspond à un problème de commande. Plus précisément, cet article présente le problème de la dosimétrie implicite, c'est-à-dire l'adaptation en temps réel de la dose de lumière d'excitation en fonction de la dose estimée d'oxygène singulet p...

  5. RELAP5/MOD3 code manual: Code structure, system models, and solution methods. Volume 1

    International Nuclear Information System (INIS)

    1995-08-01

    The RELAP5 code has been developed for best estimate transient simulation of light water reactor coolant systems during postulated accidents. The code models the coupled behavior of the reactor coolant system and the core for loss-of-coolant accidents, and operational transients, such as anticipated transient without scram, loss of offsite power, loss of feedwater, and loss of flow. A generic modeling, approach is used that permits simulating a variety of thermal hydraulic systems. Control system and secondary system components are included to permit modeling of plant controls, turbines, condensers, and secondary feedwater systems. RELAP5/MOD3 code documentation is divided into seven volumes: Volume I provides modeling theory and associated numerical schemes

  6. Systèmes multi-échelles, Modélisation et simulation

    Science.gov (United States)

    Le Bris, Claude

    Systèmes multi-échelles est une introduction à la problématique des systèmes multi-échelles du point de vue du mathématicien appliqué. Il se compose d'une mosaique d'exemples dont le seul lien est d'appartenir à la très grande famille des problèmes issus de la physique au sens large qui présentent pour leur modélisation et leur simulation cette difficulté essentielle de comporter en leur sein des échelles de temps oud'espace très différentes.

  7. Measurement of plasma potential and electron temperature by ball-pen probes in RFX-MOD

    International Nuclear Information System (INIS)

    Brotankova, J.; Adamek, J.; Stockel, J.; Martines, E.; Spolaore, M.; Cavazzana, R.; Serianni, G.; Vianello, N.; Zuin, M.

    2009-01-01

    The ball-pen probe (BPP) is an innovative electric probe for direct measurements of the plasma potential. This probe was developed in IPP Prague and it is based on the Katsumata probe concept. Combined measurements of the plasma potential by a BPP and floating potential by a Langmuir probe provide also the value of the electron temperature. First test of the BPP on the RFX-mod reversed field pinch in Padova has been performed in November 2006. The BPP head, made of boron nitride, is equipped with four graphite collectors, which are positioned at four different radial positions h inside four shafts hollow into the probe head. The radial profile of the plasma potential and also the electron temperature were measured

  8. Assessment of BETHSY Test 9.1.b using RELAP5/MOD3

    International Nuclear Information System (INIS)

    Lee, S.; Chung, B.D.; Kim, H.J.

    1993-06-01

    The 2'' cold leg break test 9.l.b, conducted at the BETHSY facility was analyzed using the RELAP5/MOD3 Version 5m5 code. The test 9.l.b was conducted with the main objective being the investigation of the thermal-hydraulic mechanisms responsible for the large core uncovery and fuel heat-up, requiring the implementation of an ultimate procedure. The present analysis demonstrates the code's capability to predict, with sufficient accuracy, the main phenomena occurring in the depressurization transient, both from a qualitative and quantitative point of view. Nevertheless, several differences regarding the evolution of phenomena and affecting the timing order have to be pointed out in the base calculation. Three calculations were carried out to study the sensitivity to change of the nodalization in the components of the loop seal cross-over legs, and of the auxiliary feedwater control logics, and of the break discharge coefficient

  9. Modèle mécanique d'une plaque mince

    OpenAIRE

    Zara, Florence

    2017-01-01

    Doctoral; Ce document présente le modèle mécanique d’une plaque mince. Je présente tout d’abord le cadre théorique de son étude, puis je présenterai les différentes notions permettant d’élaborer une simulation d’une plaque mince sous les hypothèses de petits déplacements et de petites déformations. Nous verrons ainsi l’étude de sa cinématique, la définition de sa déformation en utilisant le tenseur de déformation de Green-Lagrange linéarisé, la définition du tenseur de contraintes, la formula...

  10. Aerosol behaviour calculations with the code NAUA-Mod5M

    International Nuclear Information System (INIS)

    Bunz, H.; Koyro, M.

    1995-03-01

    This report presents the aerosol behaviour calculations within the framework of SEAFP task A8 'Radioactivity confinement analysis'. The retention capability for the aerosol-type activity of the containment has been evaluated for a number of different accident scenarios with the code NAUA-Mod5M. This code is designed to simulate the aerosol behaviour for an arbitrary multi-compartment containment originally for applications in LWR containments after severe accidents. Altogether six different scenarios have been evaluated, two for the He-cooled RPM and four for the watercooled APM. These scenarios differ mainly in the primary source taken into account, if e.g. the armour of the first wall consists of Be or W or if the divertor cooling loop or a primary cooling loop fails. The results show the positive influence of the system of step by step barriers already proved to be successful for other applications. (orig.) [de

  11. Modèles types de lettres et courriers électroniques

    CERN Document Server

    Fayet, Michelle

    2008-01-01

    Bien rédiger les lettres et mails professionnels renforce l'image de qualité de votre entreprise. La 2e édition de ce livre vous offre les clés essentielles pour améliorer la rédaction de votre courrier professionnel et vous propose, par le CD-Rom joint, des modèles de lettres et e-mails directement utilisables. Ils couvrent les situations les plus courantes rencontrées quotidiennement dans une entreprise : les demandes de renseignements, les commandes, les livraisons, les facturations, le recrutement, la gestion du personnel, les échanges avec les partenaires, les banques, les administrations. Indispensable pour rédiger des courriers efficaces, ce guide est un outil de travail incontournable pour tous salariés en charge de la rédaction du courrier, et particulièrement pour les secrétaires et assistantes.

  12. Modélisation du vieillissement des anciens tunnels maçonnés

    OpenAIRE

    Idris, Jamal; Verdel, Thierry; AL HEIB, Marwan; Piguet, Jack-Pierre

    2006-01-01

    National audience; Les tunnels anciens sont généralement soutenus ou revêtus de structures en maçonnerie qui vieillissent avec le temps. Nous proposons ici une analyse du comportement de ces ouvrages par la technique des plans d'expérience appliquée à des expériences numériques, et en particulier à des modèles numériques avec la méthode des éléments distincts. Cette analyse vise la compréhension de l'évolution du comportement de la maçonnerie dans le temps et l'évaluation de l'influence des p...

  13. Analysis of C-MOD molybdenum divertor erosion and code/data comparison

    Energy Technology Data Exchange (ETDEWEB)

    Brooks, J.N., E-mail: brooksjn@purdue.edu [Purdue University, West Lafayette, IN (United States); Allain, J.P. [Purdue University, West Lafayette, IN (United States); Whyte, D.G.; Ochoukov, R.; Lipschultz, B. [Massachusetts Institute of Technology, Cambridge, MA (United States)

    2011-08-01

    We analyze an important 15 year old Alcator C-MOD study of campaign-integrated molybdenum divertor erosion in which the measured net erosion was significantly higher ({approx}X3) than originally predicted by a simple model . We perform full process sputtering erosion/redeposition computational analysis including the effect of a possible RF induced sheath. The simulations show that most sputtered Mo atoms are ionized close to the surface and strongly redeposited, via Lorentz force motion and collisional friction with the high density incoming plasma. The predicted gross erosion profile is a reasonable match to MoI influx data, however, the critically important net erosion comparison with post-exposure Mo tile analysis is poor, with {approx}X10 higher peak erosion measured than computed. An RF sheath increases predicted erosion by {approx}45%, thus being significant but not fundamental. We plan future analysis.

  14. CONTEMPT-4MOD3, LWR Containment Long-Term Pressure Distribution and Temperature Distribution in LOCA

    International Nuclear Information System (INIS)

    Lin, C.C.; Economos, C.; Lehner, J.R.; Maise, G.; Ng, K.K.; Mirsky, S.M.

    2002-01-01

    1 - Description of problem or function: CONTEMPT-4/MOD5 describes the response of multi-compartment containment systems subjected to postulated loss-of-coolant accident (LOCA) conditions. The program can accommodate both pressurized water reactor (PWR) and boiling water reactor (BWR) containment systems. Also, both design basis accident (DBA) and degraded core type LOCA conditions can be analyzed. The program calculates the time variation of compartment pressures, temperatures, and mass and energy inventories due to inter-compartment mass and energy exchange taking into account user- supplied descriptions of compartments, inter-compartment junction flow areas, LOCA source terms, and user-selected problem features. Analytical models available to describe containment systems include models for containment fans and pumps, cooling sprays, heat conducting structures, sump drains, PWR ice condensers, and BWR pressure suppression systems. To accommodate degraded core type accidents, analytical models for hydrogen combustion within compartments and energy transfer due to gas radiation are also provided. CONTEMPT4/MOD6 is an update of previous CONTEMPT4 versions. Improvements in CONTEMPT4/MOD6 over CONTEMPT4/MOD3 include coding of a BWR pressure suppression system model, a hydrogen/carbon monoxide burn model, a gas radiation heat transfer model, a user specified variable junction (leakage) area as a function of pressure or time, additional heat transfer coefficient options for heat structures, generalized initial compartment conditions for inerted containment, an alternative containment spray model and spray carry-over capability. Also, the thermodynamic properties routines have been extended to accommodate the higher temperature and multicomponent gas mixtures associated with combustion. In addition, reduced running time is achieved by incorporation of an optional implicit numerical algorithm for junction flow. This makes economically feasible the analysis of very long

  15. Modèle énergétique de la serre agricole

    Science.gov (United States)

    Monteil, C.; Issanchou, G.; Amouroux, M.

    1991-03-01

    The authors present a complete thermal model of a greenhouse. This model takes into account the various physical processes (conduction, convection, evaporation, condensation, solar and long-wave radiations) which are involved in the dynamic energy balance of the whole system (cover, inside air, plant canopy, heat exchanger, screen and soil layers). The main features of this model are the followings : 1) A detailed study of the long-wave radiative exchanges by the use of shape-factors calculations. An example shows that the geometrical configuration of the heat exchanger has a great effect on its efficiency. 2) The use of an analytic periodic solution to set convenient initial values for the temperatures of the ground layers, in order to accelerate the convergence. This method optimizes the dynamic response of the model on a standard microcomputer. This model is a basic ingredient of a friendly user software developed for greenhouses heating systems design : Thermi-Serre^{{}}. Les auteurs présentent un modèle énergétique complet de la serre agricole, qui intègre l'ensemble des processus qui régissent les échanges thermiques entre la couverture, l'écran thermique, l'air intérieur, les plantes, le sol et les échangeurs de chaleur: conduction, convection, évaporation, condensation, rayonnements solaires et de grande longueur d'onde, inertie thermique. Cet article développe, puis illustre les particularités de ce modèle: 1) L'analyse approfondie des échanges infrarouges de grande longueur d'onde où l'on tient compte, par le biais des facteurs de forme, de la géométrie et de la position respective des échangeurs de chaleur et des cultures. Un exemple montre que la position d'un échangeur dans la serre peut modifier son efficacité. 2) Le choix d'une solution analytique périodique pour initialiser judicieusement, au départ d'une simulation dynamique, la température a priori inconnue des diverses couches de sol. On montre que cette méthode, qui r

  16. High-throughput metal susceptibility testing of microbial biofilms.

    Science.gov (United States)

    Harrison, Joe J; Turner, Raymond J; Ceri, Howard

    2005-10-03

    Microbial biofilms exist all over the natural world, a distribution that is paralleled by metal cations and oxyanions. Despite this reality, very few studies have examined how biofilms withstand exposure to these toxic compounds. This article describes a batch culture technique for biofilm and planktonic cell metal susceptibility testing using the MBEC assay. This device is compatible with standard 96-well microtiter plate technology. As part of this method, a two part, metal specific neutralization protocol is summarized. This procedure minimizes residual biological toxicity arising from the carry-over of metals from challenge to recovery media. Neutralization consists of treating cultures with a chemical compound known to react with or to chelate the metal. Treated cultures are plated onto rich agar to allow metal complexes to diffuse into the recovery medium while bacteria remain on top to recover. Two difficulties associated with metal susceptibility testing were the focus of two applications of this technique. First, assays were calibrated to allow comparisons of the susceptibility of different organisms to metals. Second, the effects of exposure time and growth medium composition on the susceptibility of E. coli JM109 biofilms to metals were investigated. This high-throughput method generated 96-statistically equivalent biofilms in a single device and thus allowed for comparative and combinatorial experiments of media, microbial strains, exposure times and metals. By adjusting growth conditions, it was possible to examine biofilms of different microorganisms that had similar cell densities. In one example, Pseudomonas aeruginosa ATCC 27853 was up to 80 times more resistant to heavy metalloid oxyanions than Escherichia coli TG1. Further, biofilms were up to 133 times more tolerant to tellurite (TeO3(2-)) than corresponding planktonic cultures. Regardless of the growth medium, the tolerance of biofilm and planktonic cell E. coli JM109 to metals was time

  17. RELAP5/MOD2 analysis of LOFT Experiment L9-3

    International Nuclear Information System (INIS)

    Birchley, J.C.

    1992-04-01

    An analysis has been performed of LOFT Experiment L9-3, a loss-of-feedwater anticipated transient without trip, in order to support the validation of RELAP5/MOD2. Experiment L9-3 exhibited a rapid boildown of the steam generator, following the loss of feed, with the reactor remaining close to its initial power until the steam generator tubes became sufficiently uncovered for primary to secondary heat transfer to be significantly reduced. The ensuing heat up of the primary fluid resulted in a reduction in power induced by the moderator feedback. The primary system pressure increased to the safety relief valve setpoint, before the fall in reactor power allowed the mismatch between primary system heat input and heat removal via the steam generator to be accommodated by cycling of the pilot operated relief valve (PORV). Comparison between calculation and data shows generally good agreement, though with discrepancies in some areas. Weaknesses in the code's treatment of interphase drag and in the representation of the pressuriser spray are indicated, although a shortage of definitive data, particularly in the steam generator, may also be a factor. The overprediction of interphase drag led to a tendency to underpredict the initial inventory in the steam generator and also, perhaps, to overpredict the steam generator heat transfer while the tubes were being uncovered. There is indication that the pressuriser vapour region conditions were close to equilibrium during spray operation. The point kinetics model in RELAP5/MOD2 proved a viable means of representing the power history for this transient

  18. Multispecies density peaking in gyrokinetic turbulence simulations of low collisionality Alcator C-Mod plasmas

    Energy Technology Data Exchange (ETDEWEB)

    Mikkelsen, D. R., E-mail: dmikkelsen@pppl.gov; Bitter, M.; Delgado-Aparicio, L.; Hill, K. W. [Princeton Plasma Physics Laboratory, P.O. Box 451, Princeton, New Jersey 08543 (United States); Greenwald, M.; Howard, N. T.; Hughes, J. W.; Rice, J. E. [MIT Plasma Science and Fusion Center, 175 Albany St., Cambridge, Massachusetts 02139 (United States); Reinke, M. L. [MIT Plasma Science and Fusion Center, 175 Albany St., Cambridge, Massachusetts 02139 (United States); York Plasma Institute, Department of Physics, University of York, Heslington, York YO10 5DD (United Kingdom); Podpaly, Y. [MIT Plasma Science and Fusion Center, 175 Albany St., Cambridge, Massachusetts 02139 (United States); AAAS S and T Fellow placed in the Directorate for Engineering, NSF, 4201 Wilson Blvd., Arlington, Virginia 22230 (United States); Ma, Y. [MIT Plasma Science and Fusion Center, 175 Albany St., Cambridge, Massachusetts 02139 (United States); ITER Organization, Route de Vinon-sur-Verdon, CS 90 046, 13067 St Paul Lez Durance Cedex (France); Candy, J.; Waltz, R. E. [General Atomics, P.O. Box 85608, San Diego, California 92186-5608 (United States)

    2015-06-15

    Peaked density profiles in low-collisionality AUG and JET H-mode plasmas are probably caused by a turbulently driven particle pinch, and Alcator C-Mod experiments confirmed that collisionality is a critical parameter. Density peaking in reactors could produce a number of important effects, some beneficial, such as enhanced fusion power and transport of fuel ions from the edge to the core, while others are undesirable, such as lower beta limits, reduced radiation from the plasma edge, and consequently higher divertor heat loads. Fundamental understanding of the pinch will enable planning to optimize these impacts. We show that density peaking is predicted by nonlinear gyrokinetic turbulence simulations based on measured profile data from low collisionality H-mode plasma in Alcator C-Mod. Multiple ion species are included to determine whether hydrogenic density peaking has an isotope dependence or is influenced by typical levels of low-Z impurities, and whether impurity density peaking depends on the species. We find that the deuterium density profile is slightly more peaked than that of hydrogen, and that experimentally relevant levels of boron have no appreciable effect on hydrogenic density peaking. The ratio of density at r/a = 0.44 to that at r/a = 0.74 is 1.2 for the majority D and minority H ions (and for electrons), and increases with impurity Z: 1.1 for helium, 1.15 for boron, 1.3 for neon, 1.4 for argon, and 1.5 for molybdenum. The ion temperature profile is varied to match better the predicted heat flux with the experimental transport analysis, but the resulting factor of two change in heat transport has only a weak effect on the predicted density peaking.

  19. Construction and characteristics of questionnaire for the assessment of defense mechanisms: MOD

    Directory of Open Access Journals (Sweden)

    Džamonja-Ignjatović Tamara

    2014-01-01

    Full Text Available Defense mechanisms are psychological constructs of key importance for the assessment of personality and planning therapeutic process. Their assessment is mainly based on interview, observation and projective techniques. Questionnaires, as the self-assessment techniques, apparently are not suitable method for unconscious processes such as defense mechanisms. The paper presents the results of construction of the questionnaire for the assessment of defense mechanisms, abbreviated called MOD (Mechanisms of Defense, which represents an attempt to clarify conceptualization and operationalization of these constructs through a variety of behavioral and emotional manifestations, personal attitudes and beliefs, patterns of interpersonal relationships and feedback from environment. Research objectives included testing of metric characteristics and the factor structure of the questionnaire, as well as its validity for differentiating subjects from clinical and non-clinical populations. The questionnaire has 110 items assessed at the 5-point Likert scale for evaluation of 20 defense mechanisms. The sample consisted of 194 subjects of both sexes, of which 136 students of psychology and social work and 58 nonpsychotic patients from clinical populations. The results showed that the reliability of the scale varies from high to unsatisfactory (Cronbach alpha .82- .35, although for most subscales is around .65-.70. The most of defense mechanisms has one factor structure, whereas from about a third of the subscales two principal components were isolated. Analysis of the structure of mature defense mechanisms clearly derived out four factors corresponding to the presumed mechanisms of defense, while for the groups of neurotic and immature mechanisms were not obtained pure solutions. The questionnaire successfully differentiate clinical from non-clinical sample, based on higher scores on mature and lower scores on immature mechanisms, while the groups did not differ

  20. Modelling of WWER-1000 steam generators by REALP5/MOD3.2 code

    Energy Technology Data Exchange (ETDEWEB)

    D`Auria, F.; Galassi, G.M. [Univ. of Pisa (Italy); Frogheri, M. [Univ. of Genova (Italy)

    1997-12-31

    The presentation summarises the results of best estimate calculations carried out with reference to the WWER-1000 Nuclear Power Plant, utilizing a qualified nodalization set-up for the Relap5/Mod3.2 code. The nodalization development has been based on the data of the Kozloduy Bulgarian Plant. The geometry of the steam generator imposed drastic changes in noding philosophy with respect to what is suitable for the U-tubes steam generators. For the secondary side a symmetry axis was chosen to separate (in the nodalization) the hot and the cold sides of the tubes. In this way the secondary side of the steam generators was divided into three zones: (a) the hot zone including the hot collector and the hot l/2 parts of the tubes; (b) the cold zone including the cold collector and the cold 1/2 parts of the tubes; (c) the downcomer region, where down flow is assumed. As a consequence of above in the primary side more nodes are placed on the hot side of the tubes. Steady state and transient qualification has been achieved, considering the criteria proposed at the University of Pisa, utilizing plant transient data from the Kozloduy and the Ukrainian Zaporosche Plants. The results of the application of the qualified WWER-1000 Relap5/Mod3.2 nodalization to various transients including large break LOCA, small break LOCA and steam generator tube rupture, together with a sensitivity analysis on the steam generators, are reported in the presentation. Emphasis is given to the prediction of the steam generators performances. 23 refs.

  1. Neutral Transport Simulations of Gas Puff Imaging Experiments on Alcator C-Mod

    International Nuclear Information System (INIS)

    Stotler, D.P.; LaBombard, B.; Terry, J.L.; Zweben, S.J.

    2002-01-01

    Visible imaging of gas puffs has been used on the Alcator C-Mod tokamak to characterize edge plasma turbulence, yielding data that can be compared with plasma turbulence codes. Simulations of these experiments with the DEGAS 2 Monte Carlo neutral transport code have been carried out to explore the relationship between the plasma fluctuations and the observed light emission. By imposing two-dimensional modulations on the measured time-average plasma density and temperature profiles, we demonstrate that the spatial structure of the emission cloud reflects that of the underlying turbulence. However, the photon emission rate depends on the plasma density and temperature in a complicated way, and no simple scheme for inferring the plasma parameters directly from the light emission patterns is apparent. The simulations indicate that excited atoms generated by molecular dissociation are a significant source of photons, further complicating interpretation of the gas puff imaging results.Visibl e imaging of gas puffs has been used on the Alcator C-Mod tokamak to characterize edge plasma turbulence, yielding data that can be compared with plasma turbulence codes. Simulations of these experiments with the DEGAS 2 Monte Carlo neutral transport code have been carried out to explore the relationship between the plasma fluctuations and the observed light emission. By imposing two-dimensional modulations on the measured time-average plasma density and temperature profiles, we demonstrate that the spatial structure of the emission cloud reflects that of the underlying turbulence. However, the photon emission rate depends on the plasma density and temperature in a complicated way, and no simple scheme for inferring the plasma parameters directly from the light emission patterns is apparent. The simulations indicate that excited atoms generated by molecular dissociation are a significant source of photons, further complicating interpretation of the gas puff imaging results

  2. Development of a solid-phase assay for measurement of proteolytic enzyme activity

    International Nuclear Information System (INIS)

    Varani, J.; Johnson, K.; Kaplan, J.

    1980-01-01

    A solid-phase, plate assay was developed for the measurement of proteolytic enzyme activity. In this assay procedure, radiolabeled substrates were dried onto the surface of microtiter wells. Following drying, the wells were washed two times with saline to remove the nonadherent substrate. When proteolytic enzymes were added to the wells, protein hydrolysis occurred, releasing radioactivity into the supernatant fluid. The amount of protein hydrolysis that occurred was reflected by the amount of radioactivity in the supernatant fluid. When 125 I-hemoglobin was used as the substrate, it was as susceptible to hydrolysis by trypsin in the solid-phase assay as it was in solution in a standard assay procedure. Protease activity from a variety of sources (including from viable cells as well as from extracellular sources) were also able to hydrolyze the hemoglobin on the plate. 125 I-Labeled serum albumen, fibrinogen, and rat pulmonary basement membrane were also susceptible to hydrolysis by trypsin in the solid phase. When [ 14 C]elastin was dried onto the plate, it behaved in a similar manner to elastin in solution. It was resistant to hydrolysis by nonspecific proteases such as trypsin and chymotrypsin but was highly susceptible to hydrolysis by elastase. The solid-phase plate assay has several features which recommended it for routine use. It is as sensitive as standard tube assays (and much more sensitive than routinely used colormetric assays). It is quick and convenient; there are no precipitation, centrifugation, or filtration steps. In addition, very small volumes of radioactive wastes are generated. Another advantage of the solid-phase plate assay is the resistance of the dried substrates to spontaneous breakdown and to microbial contamination. Finally, this assay is suitable for use with viable cells as well as for extracellular proteases

  3. Topological susceptibility from the overlap

    DEFF Research Database (Denmark)

    Del Debbio, Luigi; Pica, Claudio

    2003-01-01

    The chiral symmetry at finite lattice spacing of Ginsparg-Wilson fermionic actions constrains the renormalization of the lattice operators; in particular, the topological susceptibility does not require any renormalization, when using a fermionic estimator to define the topological charge....... Therefore, the overlap formalism appears as an appealing candidate to study the continuum limit of the topological susceptibility while keeping the systematic errors under theoretical control. We present results for the SU(3) pure gauge theory using the index of the overlap Dirac operator to study...... the topology of the gauge configurations. The topological charge is obtained from the zero modes of the overlap and using a new algorithm for the spectral flow analysis. A detailed comparison with cooling techniques is presented. Particular care is taken in assessing the systematic errors. Relatively high...

  4. Reducing Susceptibility to Courtesy Stigma.

    Science.gov (United States)

    Bachleda, Catherine L; El Menzhi, Leila

    2018-06-01

    In light of the chronic shortage of health professionals willing to care for HIV/AIDS patients, and rising epidemics in many Muslim countries, this qualitative study examined susceptibility and resistance to courtesy stigma as experienced by nurses, doctors, and social workers in Morocco. Forty-nine in-depth interviews provided rich insights into the process of courtesy stigma and how it is managed, within the context of interactions with Islam, interactions within the workplace (patients, other health professionals), and interactions outside the workplace (the general public, friends, and family). Theoretically, the findings extend understanding of courtesy stigma and the dirty work literature. The findings also offer practical suggestions for the development of culturally appropriate strategies to reduce susceptibility to courtesy stigmatization. This study represents the first to explore courtesy stigma as a process experienced by health professionals providing HIV/AIDS care in an Islamic country.

  5. The fluorometric microculture cytotoxicity assay.

    Science.gov (United States)

    Lindhagen, Elin; Nygren, Peter; Larsson, Rolf

    2008-01-01

    The fluorometric microculture cytotoxicity assay (FMCA) is a nonclonogenic microplate-based cell viability assay used for measurement of the cytotoxic and/or cytostatic effect of different compounds in vitro. The assay is based on hydrolysis of the probe, fluorescein diacetate (FDA) by esterases in cells with intact plasma membranes. The assay is available as both a semiautomated 96-well plate setup and a 384-well plate version fully adaptable to robotics. Experimental plates are prepared with a small amount of drug solution and can be stored frozen. Cells are seeded on the plates and cell viability is evaluated after 72 h. The protocol described here is applicable both for cell lines and freshly prepared tumor cells from patients and is suitable both for screening in drug development and as a basis for a predictive test for individualization of anticancer drug therapy.

  6. A fluorimetric assay for cortisol.

    Science.gov (United States)

    Appel, Daniel; Schmid, Rolf D; Dragan, Calin-Aurel; Bureik, Matthias; Urlacher, Vlada B

    2005-09-01

    A simple, rapid and sensitive fluorimetric assay for the quantitative determination of cortisol is reported. The assay is based on the formation of a fluorescent dye when cortisol is incubated with a mixture of sulfuric acid and acetic acid. The fluorescence spectrum recorded for the resulting dye shows a maximum extinction at 475 nm and a maximum emission at 525 nm. The solvent 2-methyl-4-pentanone was used for extraction and was found to act as a fluorescence amplifier. A limit of detection of 2.7 muM was achieved, making it possible to forego solvent evaporation. The assay suffers minor interference from 11-deoxycortisol which exhibits low fluorescence at lambda (ex): 460 nm; lambda (em): 505 nm. Typical standard deviations were below 4%. We validated the assay using a biotransformation with recombinant Schizosaccharomyces pombe which regioselectively hydroxylates 11-deoxycortisol to cortisol. The method described herein is suitable for preliminary screening of microorganisms capable of steroid hydroxylation.

  7. Genetic susceptibility to lead poisoning.

    OpenAIRE

    Onalaja, A O; Claudio, L

    2000-01-01

    Major strides have been taken in the regulation of lead intoxication in the general population, but studies using genetic markers of susceptibility to environmental toxicants raise the question of whether genes can make certain individuals more vulnerable to environmental toxins such as lead. At least three polymorphic genes have been identified that potentially can influence the bioaccumulation and toxicokinetics of lead in humans. The first gene to be discussed in this review is the gene co...

  8. Antimycotics susceptibility testing of dermatophytes

    Directory of Open Access Journals (Sweden)

    Arsić-Arsenijević Valentina

    2010-01-01

    Full Text Available Dermatophytes are moulds that produce infections of the skin, hair and nails of humans and animals. The most common forms among these infections are onychomycosis and tinea pedis affecting 20% of world population. These infections are usually chronic. The treatment of dermatophytoses tends to be prolonged partly because available treatments are not very effective. Antifungal drug consumption and public health expenditure are high worldwide, as well as in Serbia. For adequate therapy, it is necessary to prove infection by isolation of dermatophytes and to test the antifungal susceptibility of isolates. Susceptibility testing is important for the resistance monitoring, epidemiological research and to compare in vitro activities of new antifungal agents. The diffusion and dilution methods of susceptibility tests are used, and technical issues of importance for the proper performance and interpretation of test results are published in the document E.DEF 9.1 (EUCAST and M38-A2 (CLSI. The aim of our paper is to promptly inform the public about technical achievements in this area, as well as the new organization of laboratory for medical mycology in our country. The formation of laboratory networks coordinated by the National Reference Laboratory for the cause of mycosis need to enable interlaboratory studies and further standardization of methods for antifungal susceptibility testing of dermatophytes, reproducibility of tests and clinical correlation monitoring (MIK values and clinical outcome of dermatophytosis. The importance of the new organization is expected efficient improvement in the dermatophytosis therapy at home, better quality of patient's life and the reduction of the cost of treatment.

  9. Transgenic mice susceptible to poliovirus.

    OpenAIRE

    Koike, S; Taya, C; Kurata, T; Abe, S; Ise, I; Yonekawa, H; Nomoto, A

    1991-01-01

    Poliovirus-sensitive transgenic mice were produced by introducing the human gene encoding cellular receptors for poliovirus into the mouse genome. Expression of the receptor mRNAs in tissues of the transgenic mice was analyzed by using RNA blot hybridization and the polymerase chain reaction. The human gene is expressed in many tissues of the transgenic mice just as in tissues of humans. The transgenic mice are susceptible to all three poliovirus serotypes, and the mice inoculated with poliov...

  10. Vector susceptibility to African trypanosomes.

    Science.gov (United States)

    Le Ray, D

    1989-01-01

    Susceptibility of tsetse fly to trypanosome depends on two distinct barriers controlling respectively colonization of midgut and, migration to salivary glands. Those barriers are modulated by barely known factors, pertaining to the physiological status of the fly as well as to cytoplasmic and nuclear inheritance. Quantification of colonization (p) and migration (m) rates provides a way to calculate intrinsic vectorial capacity (IVC) as a product IVC = p x m, and to undergo comparative analysis of underlying factors.

  11. Radioligand assay in reproductive biology

    International Nuclear Information System (INIS)

    Korenman, S.G.; Sherman, B.M.

    1975-01-01

    Radioligand assays have been developed for the principal reproductive steroids and peptide hormones. Specific binding reagents have included antibodies, plasma binders, and intracellular receptors. In each assay, problems of specificity, sensitivity, and nonspecific inhibitors were encountered. Many features of the endocrine physiology in childhood, during puberty, and in adulthood have been characterized. Hormonal evaluations of endocrine disorders of reproduction are characterized on the basis of their characteristic pathophysiologic alterations. (U.S.)

  12. Antibiotic susceptibility of Atopobium vaginae

    Directory of Open Access Journals (Sweden)

    Verschraegen Gerda

    2006-03-01

    Full Text Available Abstract Background Previous studies have indicated that a recently described anaerobic bacterium, Atopobium vaginae is associated with bacterial vaginosis (BV. Thus far the four isolates of this fastidious micro-organism were found to be highly resistant to metronidazole and susceptible for clindamycin, two antibiotics preferred for the treatment of BV. Methods Nine strains of Atopobium vaginae, four strains of Gardnerella vaginalis, two strains of Lactobacillus iners and one strain each of Bifidobacterium breve, B. longum, L. crispatus, L. gasseri and L. jensenii were tested against 15 antimicrobial agents using the Etest. Results All nine strains of A. vaginae were highly resistant to nalidixic acid and colistin while being inhibited by low concentrations of clindamycin (range: G. vaginalis strains were also susceptible for clindamycin ( 256 μg/ml but susceptible to clindamycin (0.023 – 0.125 μg/ml. Conclusion Clindamycin has higher activity against G. vaginalis and A. vaginae than metronidazole, but not all A. vaginae isolates are metronidazole resistant, as seemed to be a straightforward conclusion from previous studies on a more limited number of strains.

  13. Defining susceptibility of broiler chicks to colibacillosis

    NARCIS (Netherlands)

    Ask, B.; Waaij, van der E.H.; Eck, van J.H.H.; Arendonk, van J.A.M.; Stegeman, J.A.

    2006-01-01

    This study aimed to define the susceptibility of broilers to colibacillosis through quantification of clinical responses and to examine the relationship between susceptibility and growth retardation. A challenge experiment was carried out twice. In each trial, 192 chicks were challenged

  14. Antimicrobial Susceptibility Patterns Of Salmonella Species In ...

    African Journals Online (AJOL)

    % susceptible to cefepime and carbapenem, 91% to azithromycin, 82.1% to cefixime and 73% to quinolones. Also susceptibility to chloramphenicol, erythromycin, streptomycin, ampicillin, gentamicin, co-trimoxazole, augmentin and amikacin ...

  15. Comet assay as a human biomonitoring tool: application in occupational exposure to antineoplastic drugs

    Directory of Open Access Journals (Sweden)

    Carina Ladeira

    2015-05-01

    Occupational exposure to antineoplastic drugs is associated with genotoxic effects, although comet assay analyzed parameters were higher in exposed comparing with controls, were not significant. Also the study of the susceptibility biomarkers did not show statistical significant differences, the small size of our sample hampered the finding of a possible association, let alone a causality relationship.

  16. A Multiplexed, Probe-Based Quantitative PCR Assay for DNA of Phytophthora sojae

    Science.gov (United States)

    Phytophthora sojae (Kaufm. & Gerd.) causes seed rot, pre- and post-emergence damping off, and sometimes foliar blight in soybean (Glycine max). Crop loss may approach 100% with susceptible cultivars. We report here the development of a unique quantitative PCR assay specific to DNA of P. sojae, and a...

  17. Evaluation of the Genotype® MTBDRplus assay as a tool for drug resistance surveys

    NARCIS (Netherlands)

    Rigouts, L.; Hoza, A. S.; de Rijk, P.; Torrea, G.; Chonde, T. M.; Basra, D.; Zignol, M.; van Leth, F.; Egwaga, S. M.; van Deun, A.

    2011-01-01

    A national tuberculosis (TB) drug resistance survey in Tanzania. To compare the performance of the Genotype® MTBDRplus line-probe assay (LPA) on smear-positive sputum specimens with conventional culture and isoniazid (INH) plus rifampicin (RMP) drug susceptibility testing (DST). Mycobacterium

  18. Élaborer un modèle d'équilibre général dynamique et stochastique ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Un éventail d'outils employés en économie appliquée, comme les modèles de série chronologique ou les modèles économétriques qui s'appuient sur des propriétés ... Ces dernières années, des recherches ont montré que les modèles estimés d'EGDS peuvent produire des prévisions d'une plus grande exactitude que les ...

  19. Long-Acting C-Terminal Peptide-Modified hGH (MOD-4023): Results of a Safety and Dose-Finding Study in GHD Children.

    Science.gov (United States)

    Zelinska, Nataliya; Iotova, Violeta; Skorodok, Julia; Malievsky, Oleg; Peterkova, Valentina; Samsonova, Lubov; Rosenfeld, Ron G; Zadik, Zvi; Jaron-Mendelson, Michal; Koren, Ronit; Amitzi, Leanne; Raduk, Dmitri; Hershkovitz, Oren; Hart, Gili

    2017-05-01

    Daily injections are required for growth hormone (GH) replacement therapy, which may cause low compliance as a result of inconvenience and distress in patients. C-terminal peptide-modified human GH (MOD-4023) is developed for once-a-week dosing regimen in GH-deficient (GHD) adults and children. The present trial was a safety and dose-finding study for weekly MOD-4023 in GHD children. A multicenter, open-label, randomized, controlled phase 2 study in children with GHD, evaluating the safety, tolerability, pharmacokinetics/pharmacodynamics, and efficacy of three different weekly MOD-4023 doses, compared with daily recombinant human GH (r-hGH). The trial was conducted in 14 endocrinology centers in Europe. Fifty-three prepubertal children with GHD completed 12 months of treatment with either MOD-4023 (N = 42) or r-hGH (N = 11). C-terminal peptide-modified hGH (MOD-4023) was administered weekly at a dose of either 0.25, 0.48, or 0.66 mg/kg/wk and compared with daily hGH at a dose of 0.24 mg/kg/wk. MOD-4023 showed an estimated half-life approximately fivefold to 10-fold longer when compared with daily r-hGH. Insulin-like growth factor (IGF)-I and IGF-binding peptide 3 showed a dose-dependent increase during MOD-4023 treatment. IGF-I standard deviation score for MOD-4023 did not exceed +2. All MOD-4023 cohorts demonstrated adequate catch-up growth. The 0.66 mg/kg/wk dose demonstrated efficacy closest to daily r-hGH. No serious adverse events were observed during MOD-4023 treatment, and its tolerability was consistent with known properties of r-hGH. This study confirms the long-acting properties of MOD-4023 and shows a promising safety and tolerability profile. This provides support for initiation of a phase 3 study in GHD children using a single weekly injection of MOD-4023. Copyright © 2017 by the Endocrine Society

  20. Susceptibility tensor imaging (STI) of the brain.

    Science.gov (United States)

    Li, Wei; Liu, Chunlei; Duong, Timothy Q; van Zijl, Peter C M; Li, Xu

    2017-04-01

    Susceptibility tensor imaging (STI) is a recently developed MRI technique that allows quantitative determination of orientation-independent magnetic susceptibility parameters from the dependence of gradient echo signal phase on the orientation of biological tissues with respect to the main magnetic field. By modeling the magnetic susceptibility of each voxel as a symmetric rank-2 tensor, individual magnetic susceptibility tensor elements as well as the mean magnetic susceptibility and magnetic susceptibility anisotropy can be determined for brain tissues that would still show orientation dependence after conventional scalar-based quantitative susceptibility mapping to remove such dependence. Similar to diffusion tensor imaging, STI allows mapping of brain white matter fiber orientations and reconstruction of 3D white matter pathways using the principal eigenvectors of the susceptibility tensor. In contrast to diffusion anisotropy, the main determinant factor of the susceptibility anisotropy in brain white matter is myelin. Another unique feature of the susceptibility anisotropy of white matter is its sensitivity to gadolinium-based contrast agents. Mechanistically, MRI-observed susceptibility anisotropy is mainly attributed to the highly ordered lipid molecules in the myelin sheath. STI provides a consistent interpretation of the dependence of phase and susceptibility on orientation at multiple scales. This article reviews the key experimental findings and physical theories that led to the development of STI, its practical implementations, and its applications for brain research. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

  1. Correlation between the genotoxicity endpoints measured by two different genotoxicity assays: comet assay and CBMN assay

    Directory of Open Access Journals (Sweden)

    Carina Ladeira

    2015-06-01

    The results concerning of positive findings by micronuclei and non significant ones by comet assay, are corroborated by Deng et al. (2005 study performed in workers occupationally exposed to methotrexate, also a cytostatic drug. According to Cavallo et al. (2009, the comet assay seems to be more suitable for the prompt evaluation of the genotoxic effects, for instance, of polycyclic aromatic hydrocarbons mixtures containing volatile substances, whereas the micronucleus test seems more appropriate to evaluate the effects of exposure to antineoplastic agents. However, there are studies that observed an increase in both the comet assay and the micronucleus test in nurses handling antineoplastic drugs, although statistical significance was only seen in the comet assay, quite the opposite of our results (Maluf & Erdtmann, 2000; Laffon et al. 2005.

  2. An in vivo method of assay for Dermatophilus congolensis.

    Science.gov (United States)

    Davis, D

    1983-01-01

    An in vivo method of assay for Dermatophitus congolensis in rats is described. The optimal conditions for preparing skin before infection and subsequently harvesting the zoospores from infected skin were investigated. These experiments showed that clipping the skin had no effect on infection with this bacterium and that when the infected skin was soaked in water, increased amounts of dissolved CO2 had no effect on the release of zoospores, which was maximal within 2.5 h of immersion. Vaccination studies demonstrated that this assay gave results comparable to previously published data, where these data were quantitative. Infection with D. congolensis was not related to the production of exudate on the skin surface. This is the first report that D. congolensis can infect skin without producing an exudate. Hypotheses linking skin damage and susceptibility to infection with this bacterium are discussed in the light of this observation.

  3. The challenges associated with applying global models in heterogeneous landscapes: A case study using MOD17 GPP estimates in Hawaii

    Science.gov (United States)

    Kimball, H.; Selmants, P. C.; Running, S. W.; Moreno, A.; Giardina, C. P.

    2016-12-01

    In this study we evaluate the influence of spatial data product accuracy and resolution on the application of global models for smaller scale heterogeneous landscapes. In particular, we assess the influence of locally specific land cover and high-resolution climate data products on estimates of Gross Primary Production (GPP) for the Hawaiian Islands using the MOD17 model. The MOD17 GPP algorithm uses a measure of the fraction of absorbed photosynthetically active radiation from the National Aeronautics and Space Administration's Earth Observation System. This direct measurement is combined with global land cover (500-m resolution) and climate models ( 1/2-degree resolution) to estimate GPP. We first compared the alignment between the global land cover model used in MOD17 with a Hawaii specific land cover data product. We found that there was a 51.6% overall agreement between the two land cover products. We then compared four MOD17 GPP models: A global model that used the global land cover and low-resolution global climate data products, a model produced using the Hawaii specific land cover and low-resolution global climate data products, a model with global land cover and high-resolution climate data products, and finally, a model using both Hawaii specific land cover and high-resolution climate data products. We found that including either the Hawaii specific land cover or the high-resolution Hawaii climate data products with MOD17 reduced overall estimates of GPP by 8%. When both were used, GPP estimates were reduced by 16%. The reduction associated with land cover is explained by a reduction of the total area designated as evergreen broad leaf forest and an increase in the area designated as barren or sparsely vegetated in the Hawaii land cover product as compared to the global product. The climate based reduction is explained primarily by the spatial resolution and distribution of solar radiation in the Hawaiian Islands. This study highlights the importance of

  4. La modélisation démo-économique en macroéconomie. Historique, modèle de croissance et approche des phénomènes migratoires

    OpenAIRE

    Mesplé-Somps, Sandrine; Dumont, Jean-Christophe

    1999-01-01

    Cette note est une note pédagogique sur la modélisation démo-économique en macroéconomie. Les première et deuxième sections dressent un bilan historique ainsi qu'une définition générale de ce type de modélisation. Il faut attendre l'explosion démographique des pays en développement des années 70 pour assister à un nouveau débat sur la relation entre démographie et économie avec une remise en cause d'un effet malthusien strictement négatif de l'accroissement de la population. Par la suite, les...

  5. Bacterial Cytological Profiling (BCP as a Rapid and Accurate Antimicrobial Susceptibility Testing Method for Staphylococcus aureus

    Directory of Open Access Journals (Sweden)

    D.T. Quach

    2016-02-01

    Full Text Available Successful treatment of bacterial infections requires the timely administration of appropriate antimicrobial therapy. The failure to initiate the correct therapy in a timely fashion results in poor clinical outcomes, longer hospital stays, and higher medical costs. Current approaches to antibiotic susceptibility testing of cultured pathogens have key limitations ranging from long run times to dependence on prior knowledge of genetic mechanisms of resistance. We have developed a rapid antimicrobial susceptibility assay for Staphylococcus aureus based on bacterial cytological profiling (BCP, which uses quantitative fluorescence microscopy to measure antibiotic induced changes in cellular architecture. BCP discriminated between methicillin-susceptible (MSSA and -resistant (MRSA clinical isolates of S. aureus (n = 71 within 1–2 h with 100% accuracy. Similarly, BCP correctly distinguished daptomycin susceptible (DS from daptomycin non-susceptible (DNS S. aureus strains (n = 20 within 30 min. Among MRSA isolates, BCP further identified two classes of strains that differ in their susceptibility to specific combinations of beta-lactam antibiotics. BCP provides a rapid and flexible alternative to gene-based susceptibility testing methods for S. aureus, and should be readily adaptable to different antibiotics and bacterial species as new mechanisms of resistance or multidrug-resistant pathogens evolve and appear in mainstream clinical practice.

  6. Rapid, radiolabeled-microculture method that uses macrophages for in vitro evaluation of Mycobacterium leprae viability and drug susceptibility.

    Science.gov (United States)

    Mittal, A; Sathish, M; Seshadri, P S; Nath, I

    1983-04-01

    This paper describes a microculture rapid assay using radiolabeling and mouse macrophages to determine the viability and the drug susceptibility or resistance of Mycobacterium leprae. Comparison of M. leprae resident macrophage cultures maintained in 96-well flat-bottomed plates showed results for viability and susceptibility or resistance to dapsone that were similar to results for concurrent cultures in Leighton tubes with greater numbers of bacilli and macrophages.

  7. Rapid, Radiolabeled-Microculture Method That Uses Macrophages for In Vitro Evaluation of Mycobacterium leprae Viability and Drug Susceptibility

    OpenAIRE

    Mittal, A.; Sathish, M.; Seshadri, P. S.; Nath, Indira

    1983-01-01

    This paper describes a microculture rapid assay using radiolabeling and mouse macrophages to determine the viability and the drug susceptibility or resistance of Mycobacterium leprae. Comparison of M. leprae resident macrophage cultures maintained in 96-well flat-bottomed plates showed results for viability and susceptibility or resistance to dapsone that were similar to results for concurrent cultures in Leighton tubes with greater numbers of bacilli and macrophages.

  8. Calculations of Changes in Reactivity during some regular periods of operation of JEN-1 MOD Reactor; Calculo de vairaciones de reactividad en algunos periodos regulares de operacion del reactor JEN-1 Mod.

    Energy Technology Data Exchange (ETDEWEB)

    Alcala Ruiz, F.

    1973-07-01

    By a Point-Reactor model and Perturbation Theory, changes in reactivity during some regular operating periods of JEN-1 MOD Reactor have been calculated and compared with available measured values. they were in good agreement. Also changes in reactivity have been calculated during operations at higher power levels than the present one, concluding some practical consequences for the case of increasing the present power of this reactor. (Author)

  9. RELAP-4/MOD-3F and TOODEE-2F versions of RELAP-4/MOD-3 and TOODEE-2 computing codes conforming to the requirements of appendix K of 1OCFR50

    International Nuclear Information System (INIS)

    Serrano, M.A.B.

    1985-01-01

    The RELAP-4/MOD3 and TOODEE-2 codes were modified in order to develop a methodology for the licensing of the Angra-1 power plant reload. The main modifications were inserted in the heat transfer conditions during loss of coolant accident, involving the introduction of correlations applicable to Angra-1 type reactors and new calculations methods in order to attain consistency between the reactor under analysis and experimental data. (F.E.) [pt

  10. Toll-like Receptor 1 Polymorphisms Increase Susceptibility to Candidemia

    Science.gov (United States)

    Plantinga, Theo S.; Johnson, Melissa D.; Scott, William K.; van de Vosse, Esther; Velez Edwards, Digna R.; Smith, P. Brian; Alexander, Barbara D.; Yang, John C.; Kremer, Dennis; Laird, Gregory M.; Oosting, Marije; Joosten, Leo A. B.; van der Meer, Jos W. M.; van Dissel, Jaap T.; Walsh, Thomas J.; Perfect, John R.; Kullberg, Bart Jan

    2012-01-01

    (See the editorial commentary by Bagni and Whitby, on pages 873–4.) Background. Candidemia is a severe invasive fungal infection with high mortality. Recognition of Candida species is mediated through pattern recognition receptors such as Toll-like receptors (TLRs). This study assessed whether genetic variation in TLR signaling influences susceptibility to candidemia. Methods. Thirteen mostly nonsynonymous single nucleotide polymorphisms (SNPs) in genes encoding TLRs and signaling adaptors MyD88 and Mal/TIRAP were genotyped in 338 patients (237 white, 93 African American, 8 other race) with candidemia and 351 noninfected controls (263 white, 88 African American). The SNPs significant in univariate analysis were further analyzed with multivariable logistic regression to determine association with clinical outcomes. Functional consequences of these polymorphisms were assessed via in vitro stimulation assays. Results. Analyses of TLR SNPs revealed that 3 TLR1 SNPs (R80T, S248N, I602S) were significantly associated with candidemia susceptibility in whites. This association was not found in African Americans, likely due to lower power in this smaller study population. Furthermore, these TLR1 polymorphisms displayed impaired cytokine release by primary monocytes. No associations with susceptibility to candidemia were observed for SNPs in TLR2, TLR4, TLR6, TLR9, MyD88, or TIRAP. Conclusions. Nonsynonymous SNPs in TLR1 are associated with impaired TLR1 function, decreased cytokine responses, and predisposition to candidemia in whites. PMID:22301633

  11. Magnetic susceptibility of functional groups

    International Nuclear Information System (INIS)

    Herr, T.; Ferraro, M.B.; Contreras, R.H.

    1990-01-01

    Proceeding with a series of works where new criteria are applied to the the calculation of the contribution of molecular fragments to certain properties, results are presented for a group of 1-X-benzenes and 1-X-naphtalenes for the magnetic susceptibility constant. Both the diamagnetic and paramagnetic parts are taken into account. To reduce the problems associated with the Gauge dependence originated in the approximations made, Gauge independent atomic orbitals (GIAO) orbitals are used in the atomic orbital basis. Results are discussed in terms of functional groups. (Author). 17 refs., 1 fig., 3 tabs

  12. Magnetic susceptibility of curium pnictides

    International Nuclear Information System (INIS)

    Nave, S.E.; Huray, P.G.; Peterson, J.R.; Damien, D.A.; Haire, R.G.

    1981-09-01

    The magnetic susceptibility of microgram quantities of 248 CmP and 248 CmSb has been determined with the use of a SQUID micromagnetic susceptometer over the temperature range 4.2 to 340 K and in the applied magnetic field range of 0.45 to 1600 G. The fcc (NaCl-type) samples yield magnetic transitions at 73K and 162 K for the phosphide and antimonide, respectively. Together with published magnetic data for CmN and CmAs, these results indicate spatially extended exchange interactions between the relatively localized 5f electrons of the metallic actinide atoms

  13. Représentation du couplage hydrochimique et mécanique dans les argiles actives non saturées Modélisation hydrochimique des argiles

    OpenAIRE

    Laredj, Nadia; Missoum, Hanifi; Bendani, Karim

    2009-01-01

    Afin de prédire la pression de gonflement des argiles actives, différents modèles ont été proposés ces dernières années. Quelques modèles sont basés sur les propriétés géotechniques; ces modèles sont empiriques obtenus à partir d’approches statistiques. Les autres modèles reposent d’une part sur des concepts thermodynamiques, et d’autre part sur la théorie de la double couche diffuse de Gouy Chapman. Les caractéristiques de gonflement sont fortement influencées par la compositi...

  14. The implementation of the CDC version of RELAP5/MOD1/019 on an IBM compatible computer system (AMDAHL 470/V8)

    International Nuclear Information System (INIS)

    Kolar, W.; Brewka, W.

    1984-01-01

    RELAP5/MOD1 is an advanced one-dimensional best estimate system code, which is used for safety analysis studies of nuclear pressurized water reactor systems and related integral and separate effect test facilities. The program predicts the system response for large break, small break LOCA and special transients. To a large extent RELAP5/MOD1 is written in Fortran, only a small part of the program is coded in CDC assembler. RELAP5/MOD1 was developed on the CDC CYBER 176 at INEL*. The code development team made use of CDC system programs like the CDC UPDATE facility and incorporated in the program special purpose software packages. The report describes the problems which have been encountered when implementing the CDC version of RELAP5/MOD1 on an IBM compatible computer systems (AMDAHL 470/V8)

  15. Ceftriaxone susceptibility of oxacillin-susceptible Staphylococcus aureus from patients with prosthetic joint infection.

    Science.gov (United States)

    Greenwood-Quaintance, Kerryl E; Kohner, Peggy; Osmon, Douglas R; Virk, Abinash; Patel, Robin

    2015-06-01

    Ceftriaxone is used to treat oxacillin-susceptible S. aureus (OSSA) prosthetic joint infection (PJI). Susceptibility of ceftriaxone against OSSA has been questioned. Ceftriaxone susceptibility was determined against 100 PJI OSSA isolates. Ceftriaxone MIC90/MIC50 were 8/4 and 4/3μg/mL by broth microdilution and Etest, respectively. Ceftriaxone susceptibility is inferable by oxacillin susceptibility. Copyright © 2015 Elsevier Inc. All rights reserved.

  16. Real-Time PCR Targeting thepenAMosaic XXXIV Type for Prediction of Extended-Spectrum-Cephalosporin Susceptibility in Clinical Neisseria gonorrhoeae Isolates.

    Science.gov (United States)

    Wong, L K; Hemarajata, P; Soge, O O; Humphries, R M; Klausner, J D

    2017-11-01

    Neisseria gonorrhoeae isolates with decreased susceptibility to extended-spectrum cephalosporins (ESCs) are increasing. We developed an assay to predict N. gonorrhoeae susceptibility to ESCs by targeting penA mosaic XXXIV, an allele prevalent among U.S. isolates with elevated ESC MICs. The assay was 97% sensitive and 100% specific for predicting at least one ESC MIC above the CDC alert value among clinical isolates, and it could be multiplexed with a previously validated gyrA PCR to predict ciprofloxacin susceptibility. Copyright © 2017 American Society for Microbiology.

  17. Early zebrafish embryogenesis is susceptible to developmental TDCPP exposure.

    Science.gov (United States)

    McGee, Sean P; Cooper, Ellen M; Stapleton, Heather M; Volz, David C

    2012-11-01

    Chlorinated phosphate esters (CPEs) are widely used as additive flame retardants for low-density polyurethane foams and have frequently been detected at elevated concentrations within indoor environmental media. To begin characterizing the potential toxicity of CPEs on early vertebrate development, we examined the developmental toxicity of four CPEs used in polyurethane foam: tris(1,3-dichloro-2-propyl) phosphate (TDCPP), tris(2-chloroethyl) phosphate (TCEP), tris(1-chloro-2-propyl) phosphate (TCPP), and 2,2-bis(chloromethyl)propane-1,3-diyl tetrakis(2-chlorethyl) bis(phosphate) (V6). Using zebrafish as a model for vertebrate embryogenesis, we first screened the potential teratogenic effects of TDCPP, TCEP, TCPP, and V6 using a developmental toxicity assay. Based on these results, we focused on identification of susceptible windows of developmental TDCPP exposure as well as evaluation of uptake and elimination of TDCPP and bis(1,3-dichloro-2-propyl)phosphate (BDCPP, the primary metabolite) within whole embryos. Finally, because TDCPP-specific genotoxicity assays have, for the most part, been negative in vivo and because zygotic genome remethylation is a key biological event during cleavage, we investigated whether TDCPP altered the status of zygotic genome methylation during early zebrafish embryogenesis. Overall, our findings suggest that the cleavage period during zebrafish embryogenesis is susceptible to TDCPP-induced delays in remethylation of the zygotic genome, a mechanism that may be associated with enhanced developmental toxicity following initiation of TDCPP exposure at the start of cleavage. Our results suggest that further research is needed to better understand the effects of a widely used and detected CPE within susceptible windows of early vertebrate development.

  18. Reference cells and ploidy in the comet assay

    Directory of Open Access Journals (Sweden)

    Gunnar eBrunborg

    2015-02-01

    Full Text Available In the comet assay, single cells are analyzed with respect to their level of DNA damage. Discrimination of the individual cell or cell type based on DNA content, with concomitant scoring of the DNA damage, is useful since this may allow analysis of mixtures of cells. Different cells can then be characterized based on their ploidy, cell cycle stage, or genome size. We here describe two applications of such a cell type-specific comet assay: (i Testicular cell suspensions, analyzed on the basis of their ploidy during spermatogenesis; and (ii reference cells in the form of fish erythrocytes which can be included as internal standards to correct for inter-assay variations. With standard fluorochromes used in the comet assay, the total staining signal from each cell – whether damaged or undamaged – was found to be associated with the cell’s DNA content. Analysis of the fluorescence intensity of single cells is straightforward since these data are available in scoring systems based on image analysis. The analysis of testicular cell suspensions provides information on cell type specific composition, susceptibility to genotoxicants, and DNA repair. Internal reference cells, either untreated or carrying defined numbers of lesions induced by ionizing radiation, are useful for investigation of experimental factors that can cause variation in comet assay results, and for routine inclusion in experiments to facilitate standardization of methods and comparison of comet assay data obtained in different experiments or in different laboratories. They can also be used - in combination with a reference curve - to quantify the DNA lesions induced by a certain treatment. Fish cells of a range of genome sizes, both greater and smaller than human, are suitable for this purpose and they are inexpensive.

  19. A radioreceptor assay for benzodiazepines

    International Nuclear Information System (INIS)

    Hunt, P.; Husson, J.-M.; Raynaud, J.-P.

    1979-01-01

    A simple, rapid and sensitive radioreceptor assay for determining benzodiazepines in serum is based on the displacement by the drug specific [ 3 H] diazepam binding to a membrane fraction from rat brain. The limit of detection of the more active benzodiazepines is about 0.5 ng. Diazepam, nitrazepam, clobazam and HR 458 have been assayed in human serum after a single oral clinical dose. The results can be used for determining pharmacokinetic parameters. The technique measures not only the parent benzodiazepine but also clinically active metabolites. (author)

  20. Analyse mathématique d’un modèle épidémiologique SIRC : cas de la grippe A H1N1.

    OpenAIRE

    GHAOUZI, HALIMA

    2014-01-01

    Dans ce travail, on a prÈsentÈ une analyse de modËle mathÈmatique qui modÈlise líÈvolution de la grippe A H1N1, il est sous la forme SIRC. Une Ètude díÈxistence et líunicitÈ de la solution est dÈtaillÈe pour le systËme avec ou sans controle.

  1. Mission Operations Directorate - Success Legacy of the Space Shuttle Program (Overview of the Evolution and Success Stories from MOD During the Space Shuttle program)

    Science.gov (United States)

    Azbell, Jim A.

    2011-01-01

    In support of the Space Shuttle Program, as well as NASA's other human space flight programs, the Mission Operations Directorate (MOD) at the Johnson Space Center has become the world leader in human spaceflight operations. From the earliest programs - Mercury, Gemini, Apollo - through Skylab, Shuttle, ISS, and our Exploration initiatives, MOD and its predecessors have pioneered ops concepts and emphasized a history of mission leadership which has added value, maximized mission success, and built on continual improvement of the capabilities to become more efficient and effective. This paper provides specific examples that illustrate how MOD's focus on building and contributing value with diverse teams has been key to their successes both with the US space industry and the broader international community. This paper will discuss specific examples for the Plan, Train, Fly, and Facilities aspects within MOD. This paper also provides a discussion of the joint civil servant/contractor environment and the relative badge-less society within MOD. Several Shuttle mission related examples have also been included that encompass all of the aforementioned MOD elements and attributes, and are used to show significant MOD successes within the Shuttle Program. These examples include the STS-49 Intelsat recovery and repair, the (post-Columbia accident) TPS inspection process and the associated R-Bar Pitch Maneuver for ISS missions, and the STS-400 rescue mission preparation efforts for the Hubble Space Telescope repair mission. Since their beginning, MOD has consistently demonstrated their ability to evolve and respond to an ever changing environment, effectively prepare for the expected and successfully respond to the unexpected, and develop leaders, expertise, and a culture that has led to mission and Program success.

  2. Application of RELAP5/MOD3.1 code to the LOFT test L3-6

    International Nuclear Information System (INIS)

    Pylev, S.S.; Roginskaja, V.L.

    1998-02-01

    A calculation of LOFT Experiment L3-6, a small break equivalent to a 4-in diameter rupture in the cold leg of a four-loop commercial pressurized water reactor, has been performed to help validate RELAP5/MOD3.1 for this application. The version of the code to be used is SCDAP/RELAP5/MOD3.1.8d0. Three calculations were carried out in order to study the sensitivity to change break nozzle superheated discharge coefficient. Conducted comparative analysis of the LOFT L3-6 experiment shows on the whole a reasonable agreement between calculated data. Some discrepancies in the system pressure do not distort a picture of the transient. 6 refs

  3. Application of RELAP5/MOD3.1 code to the LOFT test L3-6

    Energy Technology Data Exchange (ETDEWEB)

    Pylev, S.S.; Roginskaja, V.L.

    1998-02-01

    A calculation of LOFT Experiment L3-6, a small break equivalent to a 4-in diameter rupture in the cold leg of a four-loop commercial pressurized water reactor, has been performed to help validate RELAP5/MOD3.1 for this application. The version of the code to be used is SCDAP/RELAP5/MOD3.1.8d0. Three calculations were carried out in order to study the sensitivity to change break nozzle superheated discharge coefficient. Conducted comparative analysis of the LOFT L3-6 experiment shows on the whole a reasonable agreement between calculated data. Some discrepancies in the system pressure do not distort a picture of the transient. 6 refs.

  4. Assessment of ICARE/CATHARE V1mod1 and V1 applications to full scale studies

    International Nuclear Information System (INIS)

    Chatelard, P.; Barre, F.; Mutelle, H.

    2001-01-01

    The objective initially assigned to the ICARE/CATHARE V1mod1 validation task was to draw a synthesis of the ability of the code to correctly reproduce the main physical processes occurring during severe accidents. Therefore, both the domain in which the ICARE/CATHARE V1mod1 predictions are satisfactory (good confidence level) and, conversely, the identification of the main code deficiencies have to be highlighted. After a brief recall of the validation strategy and the current status of the work, this paper summarizes the main lessons which were drawn by IPSN from the validation activity which was conducted during the last two years (in 2000-2001) in the particular framework of the Users' Club (both IPSN and several foreign partners were involved in this task, under the management of IPSN). (authors)

  5. Using MOD16 products for analyzing evapotranspiration and evaporation on the surface of lakes. Case studies in Romania

    Science.gov (United States)

    Stan, Florentina; Madelin, Malika; Zaharia, Liliana

    2017-04-01

    Evapotranspiration and evaporation are some of the most complex atmospheric processes and major components of the water balance. The knowledge of these processes at several spatial and temporal scales has great practical importance in the field of water resources management and agriculture. However, the direct measurement of these parameters is generally a problem, because it requires accuracy and instruments (lysimeters and pans) difficult to install; therefore many equations based on physical processes or vegetation stages have been proposed by different scientists (Thornthwaite, Penman, etc.). The use of remote sensing is a good alternative to estimate the evapotranspiration, by taking advantage of the new generation of Earth Observation Satellites. In recent years, a remote sensing product from the MODerate Resolution Imaging Spectrometer - MOD16 has been developed. The MOD16 algorithm (Mu et al. 2007) combines on the one hand remote sensing data on land cover, albedo, leaf area index and in the other hand radiation, air temperature and vapor pressure deficit data, in order to estimate real evapotranspiration (ET) and potential evapotranspiration (PET), at 1 km2 resolution. Until now the MOD16 products were not used in the Romanian studies, so the product accuracy is unknown. The main objective of this study is to correlate the MOD16 ET and PET products with the evaporation (E) data measured at the surface of some lakes (Căldăruşani, Soleşti, Cinciş), located in different climate and landform conditions in Romania, in order to establish the relationships between those parameters, that could allow estimate indirectly the evaporation, based on the MODIS products. We correlated the daily recorded pan evaporation data with the MOD16 products, by taking into account R2 coefficients. Eight-day cumulative evaporation data from the considered pans was calculated to coincide with the eight-day MOD16 products over 2010 - 2012. A secondary purpose of the paper is to

  6. Modélisation des forces de contact entre le pneu d’un avion et la piste

    OpenAIRE

    Jones, Logan

    2012-01-01

    Lorsqu’un avion atterrit, la force principale nécessaire pour arrêter l’avion est obtenue par le freinage. Par une réduction de la vitesse de rotation des roues, les freins provoquent une vitesse de glissement entre les pneus et la piste. C’est cette différence de vitesse qui génère la force de freinage capable de stopper l’avion. La modélisation de cette force est essentielle pour l’estimation de la longueur de piste à l’atterrissage. Les modèles classiques utilisés par les avionneurs sont a...

  7. Verification of the HDR-test V44 using the computer program RALOC-MOD1/83

    International Nuclear Information System (INIS)

    Jahn, H.; Pham, T. v.; Weber, G.; Pham, B.T.

    1985-01-01

    RALOC-MOD1/83 was extended by a drainage and sump level modul and several component models to serve as a containment systems code for various LWR types. One such application is to simulate the blowdown in a full pressure containment which is important for the short and long term hydrogen distribution. The post test calculation of the containment standard problem experiment HDR-V44 shows a good agreement, to the test data. The code may be used for short and long term predictions, but it was learned that double containments need the representation of the gap between the inner and outer shell into several zones to achieve a good long-term temperature prediction. The present work completes the development, verification and documentation of RALOC-MOD1. (orig.) [de

  8. Testing of Software Routine to Determine Deviate and Cumulative Probability: ModStandardNormal Version 1.0

    International Nuclear Information System (INIS)

    A.H. Monib

    1999-01-01

    The purpose of this calculation is to document that the software routine ModStandardNomal Version 1.0 which is a Visual Fortran 5.0 module, provides correct results for a normal distribution up to five significant figures (three significant figures at the function tails) for a specified range of input parameters. The software routine may be used for quality affecting work. Two types of output are generated in ModStandardNomal: a deviate, x, given a cumulative probability, p, between 0 and 1; and a cumulative probability, p, given a deviate, x, between -8 and 8. This calculation supports Performance Assessment, under Technical Product Development Plan, TDP-EBS-MD-000006 (Attachment I, DIRS 3) and is written in accordance with the AP-3.12Q Calculations procedure (Attachment I, DIRS 4)

  9. HTS current lead units prepared by the TFA-MOD processed YBCO coated conductors

    International Nuclear Information System (INIS)

    Shiohara, K.; Sakai, S.; Ishii, Y.; Yamada, Y.; Tachikawa, K.; Koizumi, T.; Aoki, Y.; Hasegawa, T.; Tamura, H.; Mito, T.

    2010-01-01

    Two superconducting current lead units have been prepared using ten coated conductors of the Tri-Fluoro-Acetate - Metal Organic Deposition (TFA-MOD) processed Y 1 Ba 2 Cu 3 O 7-δ (YBCO) coated conductors with critical current (I c ) of about 170 A at 77 K in self-field. The coated conductors are 5 mm in width, 190 mm in length and about 120 μm in overall thickness. The 1.5 μm thick superconducting YBCO layer was synthesized through the TFA-MOD process on Hastelloy TM C-276 substrate tape with two buffer oxide layers of Gd 2 Zr 2 O 7 and CeO 2 . The five YBCO coated conductors are attached on a 1 mm thick Glass Fiber Reinforced Plastics (GFRP) board and soldered to Cu caps at the both ends. We prepared two 500 A-class current lead units. The DC transport current of 800 A was stably applied at 77 K without any voltage generation in all coated conductors. The voltage between both Cu caps linearly increased with increasing the applied current, and was about 350 μV at 500 A in both current lead units. According to the estimated values of the heat leakage from 77 K to 4.2 K, the heat leakage for the current lead unit was 46.5 mW. We successfully attained reduction of the heat leakage because of improvement of the transport current performance (I c ), a thinner Ag layer of YBCO coated conductor and usage of the GFRP board for reinforcement instead of a stainless steel board used in the previous study. The DC transport current of 1400 A was stably applied when the two current lead units were joined in parallel. The sum of the heat leakages from 77 K to 4.2 K for the combined the current lead units was 93 mW. In comparison with the conventional Cu current leads by gas-cooling, it could be noted that the heat leakage of the current lead is about one order of magnitude smaller than that of the Cu current lead.

  10. The Design and Performance of a Twenty Barrel Hydrogen Pellet Injector for Alcator C-Mod

    Science.gov (United States)

    Urbahn, John A.

    A twenty barrel hydrogen pellet injector has been designed, built and tested both in the laboratory and on the Alcator C-Mod Tokamak at MIT. The injector functions by firing pellets of frozen hydrogen or deuterium deep into the plasma discharge for the purpose of fueling the plasma, modifying the density profile and increasing the global energy confinement time. The design goals of the injector are: (1) Operational flexibility, (2) High reliability, (3) Remote operation with minimal maintenance. These requirements have led to a single stage, pipe gun design with twenty barrels. Pellets are formed by in-situ condensation of the fuel gas, thus avoiding moving parts at cryogenic temperatures. The injector is the first to dispense with the need for cryogenic fluids and instead uses a closed cycle refrigerator to cool the thermal system components. The twenty barrels of the injector produce pellets of four different size groups and allow for a high degree of flexibility in fueling experiments. Operation of the injector is under PLC control allowing for remote operation, interlocked safety features and automated pellet manufacturing. The injector has been extensively tested and shown to produce pellets reliably with velocities up to 1400 m/sec. During the period from September to November of 1993, the injector was successfully used to fire pellets into over fifty plasma discharges. Experimental results include data on the pellet penetration into the plasma using an advanced pellet tracking diagnostic with improved time and spatial response. Data from the tracker indicates pellet penetrations were between 30 and 86 percent of the plasma minor radius. Line averaged density increases of up to 300 percent were recorded with peak densities of just under 1 times 10^ {21} / m^3, the highest achieved on C-Mod to date. A comparison is made between the ablation source function derived from tracker data with that predicted by four different variations of the neutral shield model

  11. Modelling compressible multiphase flows Quelques résultats concernant la modélisation des écoulements multiphasiques

    Directory of Open Access Journals (Sweden)

    Coquel Frédéric

    2013-07-01

    Full Text Available We give in this paper a short review of some recent achievements within the framework of multiphase flow modeling. We focus first on a class of compressible two-phase flow models, detailing closure laws and their main properties. Next we briefly summarize some attempts to model two-phase flows in a porous region, and also a class of compressible three-phase flow models. Some of the main difficulties arising in the numerical simulation of solutions of these complex and highly non-linear systems of PDEs are then discussed, and we eventually show some numerical results when tackling two-phase flows with mass transfer. Nous présentons dans cet article quelques résultats récents concernant la modélisation et la simulation numérique des écoulements multiphasiques. Nous nous concentrons tout d’abord sur une classe de modèles diphasiques compressibles, en détaillant les lois de fermeture et les principales propriétés du sytème. Nous résumons ensuite brièvement les propositions de modélisation d’écoulements diphasiques en milieu poreux et d’écoulements triphasiques. Quelques difficultés apparaissant dans la simulation numérique de ces modèles sont présentées, et des résultats récents comportant un transfert de masse entre phases sont finalement décrits.

  12. RELAP5/MOD2 post-test calculation of the OECD LOFT experiment LP-SB-2

    International Nuclear Information System (INIS)

    Perez, J.; Mendizabal, R.

    1992-04-01

    This document presents the analysis of the OECD LOFT LP-SB-2 Experiment performed by the Consejo de Seguridad Nuclear of Spain working group making use of RELAP5/MOD2 in the frame of the Spanish LOFT Project. LB-SB-2 experiment studies the effect of a delayed pump trip in a small break LOCA scenario with a 3-inch equivalent diameter break in the hot leg of a commercial PWR

  13. Design and operating experience on the US Department of Energy experimental Mod-0 100-kW wind turbine

    Science.gov (United States)

    Glasgow, J. C.; Birchenough, A. G.

    1978-01-01

    The experimental wind turbine was designed and fabricated to assess technology requirements and engineering problems of large wind turbines. The machine has demonstrated successful operation in all of its design modes and served as a prototype developmental test bed for the Mod-0A operational wind turbines which are currently used on utility networks. The mechanical and control system are described as they evolved in operational tests and some of the experience with various systems in the downwind rotor configurations are elaborated.

  14. Assessment of RELAP5/MOD2 against critical flow data from Marviken tests JIT 11 and CFT 21

    International Nuclear Information System (INIS)

    Rosdahl, O.; Caraher, D.

    1986-09-01

    RELAP5/MOD2 simulations of the critical flow of saturated steam are reported together with simulations of the critical flow of subcooled liquid and a low quality two-phase mixture. The experiments which were simulated used nozzle diameters of 0.3 m and 0.5 m. RELAP5 overpredicted the experimental flow rates by 10 to 25% unless discharge coefficients were applied

  15. Reactor calculations CP1: Design Basis Accident, depressurization, refilling. RELAP4-MOD6, SATAN6, TRAC PF1

    International Nuclear Information System (INIS)

    Macheteau, Y.; Menessier, D.; Pochard, R.; Trefouret, P.

    1985-01-01

    This paper presents results of calculations obtained from the codes TRAC-PF1, RELAP4-MOD6 and SATAN6. After a recall of the different modelling processes, the results are given; they concern: depressurization (pressure evolution, break flow rate); first peak of temperature (fuel can, departure nucleate boiling and stagnation point); by-pass and refilling. Finally, the advantages of TRAC-PF1 are pointed out [fr

  16. Modélisations géostatistiques du faciès petrophysique du réservoir ...

    African Journals Online (AJOL)

    Les diagraphies effectuées dans ces puits ont permis de mesurer les paramètres: Perméabilité (K), Porosité .... l'aide de travaux géologiques de surface et séismiques et surtout à l'aide de 61 puits (Fig. 4). Les principaux .... Contrairement à la modélisation par krigeage d'une fonction aléatoire Z(x), la simulation permet des.

  17. Validation expérimentale d'un modèle de luminance non couplé sur ...

    African Journals Online (AJOL)

    Les valeurs expérimentales de luminance sont en accord, en module et en phase, avec les valeurs calculées. Les incertitudes statistiques calculées sont inférieures à 9% sur les modules et 5° sur les phases, quelle que soit l'épaisseur d'échantillon choisie. Mots clés: Détection synchrone, émissivité, mesure, modélisation, ...

  18. Modélisation d'une turbine hydroélectrique adaptée à un cours d ...

    African Journals Online (AJOL)

    user

    formé par la turbine. Des lois d'interdépendance entre les grandeurs caractéristiques de la turbine sont obtenues, ce qui permet de mieux exploiter les résultats de ce travail. Mots-clés : vague, modélisation, turbine, conversion, énergie électrique, alternateur. Abstract. Study of a mechanic system to transform the kinetic ...

  19. Apport de la simulation numérique à la compréhension des mécanismes d'interaction de cavités dans le cadre de la modélisation de l'endommagement ductile sous sollicitation dynamique

    Science.gov (United States)

    Roy, G.; Buy, F.; Llorca, F.

    2002-12-01

    L'étude présentée s'inscrit dans le cadre d'une démarche menant à la construction d'un modèle analytique ou semi analytique de comportement élasto-visco-plastique endommageable, applicable aux chargements rencontrés en configuration d'impact violent et générant de l'écaillage ductile. La prise en compte des effets de compressibilité et de micro inertie est essentielle pour modéliser la phase de croissance. Des simulations numériques globales de la structure et locales à l'échelle des hétérogénéités permettent d'évaluer les niveaux de sollicitations dans les zones susceptibles de s'endommager, dévaluer des critères analytiques de germination de l'endommagement et de comprendre les mécanismes d'interaction entre les défauts. Les effets micro inertiels et de compressibilité sont ainsi mis en évidence dans les phases de germination et de coalescence des micro défauts. II s'agit ici d'une illustration non exhaustive de travaux engagés au CEA Valduc sur le tantale, dans le cadre d'une thèse [10]. Un programme matériaux en partenariat CEA-CNRS sur la modélisation multi échelles du comportement de structures a également été initié dans ce contexte.

  20. The susceptibility of circulating human influenza viruses to tizoxanide, the active metabolite of nitazoxanide.

    Science.gov (United States)

    Tilmanis, Danielle; van Baalen, Carel; Oh, Ding Yuan; Rossignol, Jean-Francois; Hurt, Aeron C

    2017-11-01

    Nitazoxanide is a thiazolide compound that was originally developed as an anti-parasitic agent, but has recently been repurposed for the treatment of influenza virus infections. Thought to exert its anti-influenza activity via the inhibition of hemagglutinin maturation and intracellular trafficking in infected cells, the effectiveness of nitazoxanide in treating patients with non-complicated influenza is currently being assessed in phase III clinical trials. Here, we describe the susceptibility of 210 seasonal influenza viruses to tizoxanide, the active circulating metabolite of nitazoxanide. An optimised cell culture-based focus reduction assay was used to determine the susceptibility of A(H1N1)pdm09, A(H3N2), and influenza B viruses circulating in the southern hemisphere from the period March 2014 to August 2016. Tizoxanide showed potent in vitro antiviral activity against all influenza viruses tested, including neuraminidase inhibitor-resistant viruses, allowing the establishment of a baseline level of susceptibility for each subtype. Median EC 50 values (±IQR) of 0.48 μM (0.33-0.71), 0.62 μM (0.56-0.75), 0.66 μM (0.62-0.69), and 0.60 μM (0.51-0.67) were obtained for A(H1N1)pdm09, A(H3N2), B(Victoria lineage), and B(Yamagata lineage) influenza viruses respectively. There was no significant difference in the median baseline tizoxanide susceptibility for each influenza subtype tested. This is the first report on the susceptibility of circulating viruses to tizoxanide. The focus reduction assay format described is sensitive, robust, and less laborious than traditional cell based antiviral assays, making it highly suitable for the surveillance of tizoxanide susceptibility in circulating seasonal influenza viruses. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

  1. Boundary plasma heat flux width measurements for poloidal magnetic fields above 1 Tesla in the Alcator C-Mod tokamak

    Science.gov (United States)

    Brunner, Dan; Labombard, Brian; Kuang, Adam; Terry, Jim; Alcator C-Mod Team

    2017-10-01

    The boundary heat flux width, along with the total power flowing into the boundary, sets the power exhaust challenge for tokamaks. A multi-machine boundary heat flux width database found that the heat flux width in H-modes scaled inversely with poloidal magnetic field (Bp) and was independent of machine size. The maximum Bp in the database was 0.8 T, whereas the ITER 15 MA, Q =10 scenario will be 1.2 T. New measurements of the boundary heat flux width in Alcator C-Mod extend the international database to plasmas with Bp up to 1.3 T. C-Mod was the only experiment able to operate at ITER-level Bp. These new measurements are from over 300 plasma shots in L-, I-, and EDA H-modes spanning essentially the whole operating space in C-Mod. We find that the inverse-Bp dependence of the heat flux width in H-modes continues to ITER-level Bp, further reinforcing the empirical projection of 500 μm heat flux width for ITER. We find 50% scatter around the inverse-Bp scaling and are searching for the `hidden variables' causing this scatter. Supported by USDoE award DE-FC02-99ER54512.

  2. Evaluation of piping heat transfer, piping flow regimes, and steam generator heat transfer for the Semiscale Mod-1 isothermal tests

    International Nuclear Information System (INIS)

    French, R.T.

    1975-08-01

    Selected experimental data pertinent to piping heat transfer, transient fluid flow regimes, and steam generator heat transfer obtained during the Semiscale Mod-1 isothermal blowdown test series (Test Series 1) are analyzed. The tests in this first test series were designed to provide counterparts to the LOFT nonnuclear experiments. The data from the Semiscale Mod-1 intact and broken loop piping are evaluated to determine the surface heat flux and average heat transfer coefficients effective during the blowdown transient and compared with well known heat transfer correlations used in the RELAP4 computer program. Flow regimes in horizontal pipe sections are calculated and compared with data obtained from horizontal and vertical densitometers and with an existing steady state flow map. Effects of steam generator heat transfer are evaluated quantitatively and qualitatively. The Semiscale Mod-1 data and the analysis presented in this report are valuable for evaluating the adequacy and improving the predictive capability of analytical models developed to predict system response to piping heat transfer, piping flow regimes, and steam generator heat transfer during a postulated loss-of-coolant accident (LOCA) in a pressurized water reactor (PWR). 16 references. (auth)

  3. TRAC-PF1/MOD3 calculations of Savannah River Laboratory Rig FA single-annulus heated experiments

    International Nuclear Information System (INIS)

    Fischer, S.R.; McDaniel, C.K.

    1992-01-01

    This paper presents the results of TRAC-PF1/MOD3 benchmarks of the Rig FA experiments performed at the Savannah River Laboratory to simulate prototypic reactor fuel assembly behavior over a range of fluid conditions typical of the emergency cooling system (ECS) phase of a loss-of-coolant accident (LOCA). The primary purpose of this work was to use the SRL Rig FA tests to qualify the TRAC-PF1/MOD3 computer code and models for computing Mark-22 fuel assembly LOCA/ECS power limits. This qualification effort was part of a larger effort undertaken by the Los Alamos National Laboratory for the US Department of Energy to independently confirm power limits for the Savannah River Site K Reactor. The results of this benchmark effort as discussed in this paper demonstrate that TRAC/PF1/MOD3 coupled with proper modeling is capable of simulating thermal-hydraulic phenomena typical of that encountered in Mark-22 fuel assembly during LOCA/ECS conditions

  4. RELAP5/MOD2 code modifications to obtain better predictions for the once-through steam generator

    International Nuclear Information System (INIS)

    Blanchat, T.; Hassan, Y.

    1989-01-01

    The steam generator is a major component in pressurized water reactors. Predicting the response of a steam generator during both steady-state and transient conditions is essential in studying the thermal-hydraulic behavior of a nuclear reactor coolant system. Therefore, many analytical and experimental efforts have been performed to investigate the thermal-hydraulic behavior of the steam generators during operational and accident transients. The objective of this study is to predict the behavior of the secondary side of the once-through steam generator (OTSG) using the RELAP5/MOD2 computer code. Steady-state conditions were predicted with the current version of the RELAP5/MOD2 code and compared with experimental plant data. The code predictions consistently underpredict the degree of superheat. A new interface friction model has been implemented in a modified version of RELAP5/MOD2. This modification, along with changes to the flow regime transition criteria and the heat transfer correlations, correctly predicts the degree of superheat and matches plant data

  5. Assessment of RELAP5/MOD3.3 condensation models for the tube bundle condensation in the PCCS of ESBWR

    International Nuclear Information System (INIS)

    Zhou, W.; Wolf, B.; Revankar, S.T.

    2011-01-01

    The passive containment condenser system (PCCS) in an ESBWR reactor consists of vertical tube bundle submerged in a large pool of water. The condensation model for the PCCS in a thermalhydraulics code RELAP5/MOD3.3 consists of the default Nusselt model and an alternate condensation model from UCB condensation correlation. An assessment of the PCCS condensation model in RELAP5/MOD3.3 was carried out using experiments conducted on a single tube and tube bundle PCCS tests at Purdue University. The experimental conditions were simulated with the default and the alternate condensation models in the REALP5/MOD3.3 beta version of the code. The default model and the UCB model (alternate model) give quite different results on condensation heat transfer for the PCCS. The default model predicts complete condensation well whereas the UCB model predicts the through flow condensation well. Based on this study it was found that none of the models in REALP5 can predict complete condensation as well as the through flow condensation well. (author)

  6. Validation of TGLF in C-Mod and DIII-D using machine learning and integrated modeling tools

    Science.gov (United States)

    Rodriguez-Fernandez, P.; White, Ae; Cao, Nm; Creely, Aj; Greenwald, Mj; Grierson, Ba; Howard, Nt; Meneghini, O.; Petty, Cc; Rice, Je; Sciortino, F.; Yuan, X.

    2017-10-01

    Predictive models for steady-state and perturbative transport are necessary to support burning plasma operations. A combination of machine learning algorithms and integrated modeling tools is used to validate TGLF in C-Mod and DIII-D. First, a new code suite, VITALS, is used to compare SAT1 and SAT0 models in C-Mod. VITALS exploits machine learning and optimization algorithms for the validation of transport codes. Unlike SAT0, the SAT1 saturation rule contains a model to capture cross-scale turbulence coupling. Results show that SAT1 agrees better with experiments, further confirming that multi-scale effects are needed to model heat transport in C-Mod L-modes. VITALS will next be used to analyze past data from DIII-D: L-mode ``Shortfall'' plasma and ECH swing experiments. A second code suite, PRIMA, allows for integrated modeling of the plasma response to Laser Blow-Off cold pulses. Preliminary results show that SAT1 qualitatively reproduces the propagation of cold pulses after LBO injections and SAT0 does not, indicating that cross-scale coupling effects play a role in the plasma response. PRIMA will be used to ``predict-first'' cold pulse experiments using the new LBO system at DIII-D, and analyze existing ECH heat pulse data. Work supported by DE-FC02-99ER54512, DE-FC02-04ER54698.

  7. Influence of continuous blood purification on inflammation and target organ damage in patients with severe acute pancreatitis complicated by MODS

    Directory of Open Access Journals (Sweden)

    Tao Wang

    2017-05-01

    Full Text Available Objective: To study the influence of continuous blood purification on inflammation and target organ damage in patients with severe acute pancreatitis accompanied by MODS. Methods: A total of 78 patients with severe acute pancreatitis complicated by MODS who were treated in our hospital between June 2012 and March 2016 were selected and divided into control group (n=39 and observation group (n=39 according to random number table. Control group were treated with routine treatment, observation group were treated with conventional treatment plus continuous blood purification, and serum inflammatory factors, liver function indexes and renal function indexes were compared between two groups of patients before and after treatment. Results: Before treatment, differences in serum levels of inflammatory factors, liver function indexes and renal function indexes were not statistically significant between two groups of patients. After treatment, serum inflammatory factors IL-6, IL-8, MCP-1 and HMGB1 levels of observation group were lower than those of control group, liver function indexes ALT, AST, TBIL and ALP levels of observation group were lower than those of control group, and renal function indexes Scr and BUN levels of observation group were lower than those of control group. Conclusion: Continuous blood purification can reduce the systemic inflammatory response as well as liver and kidney injury in patients with severe acute pancreatitis complicated by MODS.

  8. Flux-driven turbulence GDB simulations of the IWL Alcator C-Mod L-mode edge compared with experiment

    Science.gov (United States)

    Francisquez, Manaure; Zhu, Ben; Rogers, Barrett

    2017-10-01

    Prior to predicting confinement regime transitions in tokamaks one may need an accurate description of L-mode profiles and turbulence properties. These features determine the heat-flux width upon which wall integrity depends, a topic of major interest for research aid to ITER. To this end our work uses the GDB model to simulate the Alcator C-Mod edge and contributes support for its use in studying critical edge phenomena in current and future tokamaks. We carried out 3D electromagnetic flux-driven two-fluid turbulence simulations of inner wall limited (IWL) C-Mod shots spanning closed and open flux surfaces. These simulations are compared with gas puff imaging (GPI) and mirror Langmuir probe (MLP) data, examining global features and statistical properties of turbulent dynamics. GDB reproduces important qualitative aspects of the C-Mod edge regarding global density and temperature profiles, within reasonable margins, and though the turbulence statistics of the simulated turbulence follow similar quantitative trends questions remain about the code's difficulty in exactly predicting quantities like the autocorrelation time A proposed breakpoint in the near SOL pressure and the posited separation between drift and ballooning dynamics it represents are examined This work was supported by DOE-SC-0010508. This research used resources of the National Energy Research Scientific Computing Center (NERSC).

  9. Properties of marine stratocumulus obtained with partly cloudy pixel retrievals and found in the MODIS MOD06 cloud product

    Science.gov (United States)

    Boeke, Robyn C.; Allan, Andrea M.; Coakley, James A.

    2016-06-01

    Partly cloudy pixel retrievals (PCPRs) of cloud properties for marine stratocumulus were compared with those of the 1 km Moderate Resolution Imaging Spectroradiometer (MODIS) cloud product (MOD06). In addition, the fractional cloud cover obtained from the PCPRs applied to 1 km MODIS radiances was compared with that derived from the 250 m cloud mask (MOD35). The comparisons were made for pixels that were overcast and pixels that were only partially covered by clouds. Accounting for failed retrievals in both the MOD06 cloud properties and those obtained with the PCPRs leads to the suggestion that regional cloud cover be estimated in terms of lower and upper limits. The average could serve as the best estimate of the cloud cover, and the difference between the average and an extreme could serve as the uncertainty. The comparisons reveal that the overcast assumption used in the MODIS cloud property retrievals leads to cloud cover, droplet effective radii, and cloud top temperatures that are overestimated and, shortwave optical depths, liquid water paths that are underestimated. These biases persist when the properties are averaged to form spatial and temporal means. Owing to significant horizontal variations of cloud liquid water within the 1 km MODIS pixels, visible optical depths, droplet effective radii, and liquid water paths derived from the PCPRs show similar biases. The trends of the biases with pixel-scale and regional-scale cloud cover suggest that estimates of the aerosol indirect radiative forcing derived from satellites have been overestimated.

  10. Problems with the PTH assays.

    Science.gov (United States)

    Cavalier, Etienne; Delanaye, Pierre; Nyssen, Laurent; Souberbielle, Jean-Claude

    2015-05-01

    Even if the first assay for parathyroid hormone (PTH) was published in the early 1960s, its determination remains a challenge even today. Indeed, in the circulation, PTH is present in its active form (PTH 1-84), but many PTH fragments can also be present. These fragments accumulate when renal function declines and are recognized, at different extents, by the 2nd generation ("intact") PTH assays that are widely used in the clinical laboratories. Some assays, called "3rd generation PTH" do not recognize these fragments, but are not available everywhere. Hence, different problems are also linked with PTH determination. Among them, one can cite the lack of a reference method, the lack of standardization of the assays and, sometimes, the lack of consistent reference range. We can also point out stability problems and a large intra-individual variation. A workgroup is working on these problems under the auspices of the IFCC and we hope that some of these problems will be resolved in the next years. In this article, we will discuss all the possible issues of PTH determination. Copyright © 2015. Published by Elsevier Masson SAS.

  11. semen by MTT reduction assay

    African Journals Online (AJOL)

    user

    the concentration of sperm in each semen sample, sperm motility, plasma integrity of sperm in terms of hypo-osmotic swelling (HOS) test, live and dead ratio of sperm and MTT reduction assay of each ejaculate were determined. Plasma membrane integrity of fresh sperm was assessed using a hypo-osmotic swelling (HOS) ...

  12. Feasibility and cost analysis of programmatic implementation of ...

    African Journals Online (AJOL)

    Objectives: Detection of Multi-drug resistant tuberculosis in Nigeria still remains a challenge. We evaluated the feasibility of programmatic implementation of the Microscopic-Observation Drug Susceptibility (MODS) assay, a rapid culture and drug susceptibility testing technique for drug susceptibility testing in a low resource ...

  13. A closed-tube assay for genotyping of the 32-bp deletion polymorphism in the chemokine receptor 5 (CCR5) gene

    DEFF Research Database (Denmark)

    Rasmussen, Henrik Berg; Werge, Thomas

    2007-01-01

    We have developed a closed-tube assay for determination of the chemokine receptor type 5 (CCR5) 32-bp deletion allele, which protects against infections with HIV and modulates susceptibility to a variety of inflammatory diseases. This assay utilizes dissociation analysis of amplified products...

  14. SCDAP/RELAP5/MOD 3.1 Code Manual: Developmental assessment. Volume 5

    International Nuclear Information System (INIS)

    Hohorst, J.K.; Johnsen, E.C.

    1995-06-01

    The SCDAP/RELAP5 code has been developed for best estimate transient simulation of Light Water Reactor coolant systems during a severe accident. The code models the coupled behavior of the reactor coolant system, the core, fission product released during a severe accident transient as well as large and small break loss of coolant accidents, operational transients such as anticipated transient without SCRAM, loss of offsite power, loss of feedwater, and loss of flow. A generic modeling approach is used that permits as much of a particular system to be modeled as necessary. Control system and secondary system components are included to permit modeling of plant controls, turbines, condensers, and secondary feedwater conditioning systems. This volume contains detailed code-to-data calculations performed using SCDAP/RELAP5/MOD3.1, as well as comparison calculations performed with earlier code versions. Results of full plant calculations which include Surry, TMI-2, and Browns Ferry are described. Results of a nodalization study, which accounted for both axial and radial nodalization of the core, are also reported

  15. Electron Profile Stiffness and Critical Gradient Length Studies in the Alcator C-Mod Tokamak

    Science.gov (United States)

    Houshmandyar, Saeid; Hatch, David R.; Liao, Kenneth T.; Zhao, Bingzhe; Phillips, Perry E.; Rowan, William L.; Cao, Norman; Ernst, Darin R.; Rice, John E.

    2017-10-01

    Electron temperature profile stiffness was investigated at Alcator C-Mod L-mode discharges. Electrons were heated by ion cyclotron range of frequencies (ICRF) through minority heating. The intent of the heating mechanism was to vary the heat flux and simultaneously, gradually change the local gradient. The electron temperature gradient scale length (LTe- 1 = | ∇Te |/Te) was accurately measured through a novel technique, using the high-resolution radiometer ECE diagnostic. The TRANSP power balance analysis (Q/QGB) and the measured scale length (a/LTe) result in critical scale length measurements at all major radius locations. These measurements suggest that the profiles are already at the critical values. Furthermore, the dependence of the stiffness on plasma rotation and magnetic shear will be discussed. In order to understand the underlying mechanism of turbulence for these discharges, simulations using the gyrokinetic code, GENE, were carried out. For linear runs at electron scales, it was found that the largest growth rates are very sensitive to a/LTe variation, which suggests the presence of ETG modes, while the sensitivity studies in the ion scales indicate ITG/TEM modes. Supported by USDoE awards DE-FG03-96ER54373 and DE-FC02-99ER54512.

  16. Density limit and cross-field edge transport scaling in Alcator C-Mod

    International Nuclear Information System (INIS)

    LaBombard, B.

    2002-01-01

    Experiments in Alcator C-Mod have uncovered a direct link between the character and scaling of edge transport and the empirical Greenwald density limit (n G ). In low to moderate density discharges, the scrape-off layer (SOL) exhibits a two-layer structure: a near SOL (∼5 mm zone) with steep density and temperature gradients and a far SOL with flatter profiles. In the far SOL, the transport fluxes exhibit large transport events ('bursts' which carry particles to main-chamber structures. In the near SOL, transport fluxes appear to be less 'bursty' particle diffusivities in this region is found to increase strongly with local plasma collisionality. As n/n G (or collisionality) is raised, cross-field heat convection begins to compete with parallel conduction to the divertor. At N/n G ∼0.5, T E at the separatrix is reduced. As n/n G approaches ∼1, regions inside the separatrix exhibit flatter profiles with 'bursty' transport behavior; cross-field heat convection to main-chamber structures becomes comparable to the radiated power. Thus as n/n G is increased, cross-field edge transport physics progressively changes, ultimately impacting the power balance of the discharge near N/n G ∼1. (author)

  17. Characterization of magnetic field profiles at RFX-mod by Faraday rotation measurements

    Science.gov (United States)

    Auriemma, Fulvio; Brombin, Matteo; Canton, Alessandra; Giudicotti, Leonardo; Innocente, Paolo; Zilli, Enrico

    2009-11-01

    A multichannel far-infrared (FIR, λ=118.8 μm) polarimeter has been recently upgraded and re-installed on RFX-mod to measure the Faraday rotation angle along five vertical chords. Polarimetric data, associated with electron density profile, allow the reconstruction of the poloidal magnetic field profile. In this work the setup of the diagnostic is presented and the first Faraday rotation measurements are analyzed. The measurements have been performed at plasma current above 1.2 MA and electron density between 2 and 6x10^19 m-3. The actual S/N ratio is slightly lower than the expected one, due to electromagnetic coupling of the detectors with the saddle coils close to the polarimeter position. Due to this limit, only average information in the flat-top phase of the discharge could be so far obtained. The experimental data have been compared with the result of the μ&p equilibrium model [1], showing a good agreement between experiment and model, whereas the main differences are in the external region of the plasma. A different parameterization of the μ=μ0 J.B/B^2 profile has been proposed to enhance the agreement between model and experiment. [0pt] [1] Ortolani and Snack, World Scientific (1993) Singapore

  18. Posttest analysis of MIST Test 330302 using TRAC-PF1/MOD1

    Energy Technology Data Exchange (ETDEWEB)

    Boyack, B E [Los Alamos National Lab., NM (United States)

    1992-09-01

    This report discusses a posttest analysis of Multi-Loop Integral System Test (MIST) 330302 which has been performed using TRAC-PF1/MOD1. This test was one of group performed in the MIST facility to investigate high-pressure injection (HPI)-power-operated relief valve (PORV) cooling, also known as feed-and-bleed cooling. In Test 330302, HPI cooling was delayed 20 min after opening and locking the PORV open to induce extensive system voiding. We have concluded that the TRAC-calculated results are in reasonable overall agreement with the data for Test 330302. All major trends and phenomena were correctly predicted. Differences observed between the measured and calculated results have been traced and related, in part, to deficiencies in our knowledge of the facility configuration and operation. We have identified two models forwhich additional review is appropriate. However, in general, the TRAC closure models and correlations appear to be adequate for the prediction of the phenomena expected to occur during feed-and-bleed transientsin the MIST facility. We believe that the correct conclusions about trends and phenomena will be reached if the code is used in similar applications. Conclusions reached regarding use of the code to calculate similar phenomena in full-size plants (scaling implications) and regulatory implications of this work are also presented.

  19. Simulation of a beyond design-basis-accident with RELAP5/MOD3.1

    Energy Technology Data Exchange (ETDEWEB)

    Banati, J. [Lappeenranta Univ. of Technology, Lappeenranta (Finland)

    1995-09-01

    This paper summarizes the results of analyses, parametric and sensitivity studies, performed using the RELAP5/MOD3.1 computer code for the 4th IAEA Standard Problem Exercise (SPE-4). The test, conducted on the PMK-2 facility in Budapest, involved simulation of a Small Break Loss Of Coolant Accident (SBLOCA) with a 7.4% break in the cold leg of a VVER-440 type pressurized water reactor. According to the scenario, the unavailability of the high pressure injection system led to a beyond design basis accident. For prevention of core damage, secondary side bleed-and-feed accident management measures were applied. A brief description of the PMK-2 integral type test facility is presented, together with the profile and some key phenomenological aspects of this particular experiment. Emphasis is placed on the ability of the code to predict the main trends observed in the test and thus, an assessment is given for the code capabilities to represent the system transient.

  20. Total loss of CNA1 steam generators feed water simulated with RELAP5/MOD3

    International Nuclear Information System (INIS)

    Marino, Edgardo J.L.

    2000-01-01

    The results of the calculations are presented carried out by utilizing the code RELAP5/MOD3, upon the basis of the postulated initial event of total loss of feed water to the two steam generators in the nuclear power plant Atucha 1, CNA1. The evolution of the installation systems during the transient was analyzed in different conditions of availability: condenser, relief valve and safety valves in the secondary system, safety valves in the primary system and system of long-term subsequent cooling. Located in the primary and secondary systems of the installation they turn out to be prominent in this event. Upon this basis the sequences of possible evolution were calculated and those that would conduct the system toward the setting called 'damage to the core' were determined. Also those in which would arrive to a state of 'safe shutdown' were determined. These results were utilized in the verification of the tree of events utilized in the Final Report of the Probabilistic Safety Analysis for the sequence of event T9, made from calculations carried out with the code DINETZ. From this compare some differences were determined and are presented in the modified version of tree of events. (author)